Miyakogusa Predicted Gene
- Lj2g3v0521150.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0521150.2 Non Chatacterized Hit- tr|B9RM74|B9RM74_RICCO
Pentatricopeptide repeat-containing protein, putative
,23.33,9e-19,PPR: pentatricopeptide repeat domain,Pentatricopeptide
repeat; PPR_2,Pentatricopeptide repeat; PPR,P,CUFF.34651.2
(351 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 256 1e-68
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 8e-67
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 2e-65
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 1e-64
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 4e-64
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 2e-61
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 3e-61
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 5e-61
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 230 1e-60
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 228 5e-60
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 227 7e-60
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 227 8e-60
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 4e-59
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 2e-58
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 223 2e-58
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 2e-55
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 1e-53
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 205 4e-53
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 203 2e-52
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 2e-52
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 2e-51
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 6e-50
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 7e-50
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 192 4e-49
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 8e-49
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 189 2e-48
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 2e-47
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 180 1e-45
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 174 1e-43
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 2e-42
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 2e-42
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 167 7e-42
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 1e-41
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 166 2e-41
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 2e-41
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 166 2e-41
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 2e-40
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 162 3e-40
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 162 3e-40
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 161 8e-40
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 1e-39
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 160 1e-39
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 1e-39
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 8e-39
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 8e-39
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 157 1e-38
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 1e-38
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 2e-38
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 9e-38
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 3e-37
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 5e-37
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 1e-36
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 6e-36
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 1e-35
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 146 2e-35
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 146 2e-35
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 3e-35
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 4e-35
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 145 4e-35
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 144 6e-35
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 8e-35
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 144 1e-34
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 1e-34
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 2e-34
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 2e-34
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 3e-34
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 5e-34
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 5e-34
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 9e-34
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 2e-33
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 139 2e-33
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 3e-33
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 3e-32
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 135 4e-32
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 135 4e-32
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 135 4e-32
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 8e-32
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 1e-31
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 1e-31
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 133 1e-31
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 1e-31
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 2e-31
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 3e-31
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 3e-31
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 130 1e-30
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 130 1e-30
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 130 2e-30
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 2e-30
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 129 2e-30
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 2e-30
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 3e-30
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 4e-30
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 4e-30
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 4e-30
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 128 7e-30
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 9e-30
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 9e-30
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 9e-30
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 127 1e-29
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 2e-29
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 2e-29
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 2e-29
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 126 2e-29
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 3e-29
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 5e-29
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 2e-28
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 123 2e-28
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 3e-28
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 3e-28
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 3e-28
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 121 7e-28
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 1e-27
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 119 3e-27
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 3e-27
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 3e-27
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 119 4e-27
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 7e-27
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 1e-26
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 2e-26
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 3e-26
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 4e-26
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 4e-26
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 5e-26
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 5e-26
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 5e-26
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 8e-26
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 114 1e-25
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 3e-25
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 3e-25
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 112 4e-25
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 1e-24
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 1e-24
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 1e-24
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 110 2e-24
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 3e-24
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 3e-24
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 4e-24
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 108 5e-24
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 6e-24
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 9e-24
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 106 2e-23
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 3e-23
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 4e-23
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 4e-23
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 5e-23
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 105 5e-23
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 103 2e-22
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 3e-22
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 3e-22
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 3e-22
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 7e-22
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 3e-21
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 4e-21
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 99 4e-21
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 7e-21
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 7e-21
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 8e-21
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 98 9e-21
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 98 9e-21
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 1e-20
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 3e-20
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 3e-20
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 8e-20
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 9e-20
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 1e-19
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 2e-19
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 4e-18
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 5e-18
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 7e-18
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 8e-18
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 9e-18
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 88 1e-17
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 1e-17
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 3e-17
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 3e-17
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 4e-17
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 4e-17
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 4e-17
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 4e-17
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 86 4e-17
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 5e-17
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 8e-17
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 85 8e-17
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 9e-17
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 3e-16
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 83 3e-16
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 4e-16
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 5e-16
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 82 5e-16
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 5e-16
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 6e-16
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 6e-16
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 6e-16
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 7e-16
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 7e-16
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 8e-16
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 81 9e-16
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 81 1e-15
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 1e-15
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 80 2e-15
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 80 2e-15
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 4e-15
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 8e-15
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 9e-15
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 1e-14
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 77 2e-14
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 3e-14
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 76 3e-14
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 76 3e-14
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 75 5e-14
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 5e-14
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 75 9e-14
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 74 2e-13
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 2e-13
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 2e-13
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 3e-13
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 5e-13
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 6e-13
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 9e-13
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 9e-13
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 9e-13
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 71 1e-12
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 70 1e-12
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 70 2e-12
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 69 3e-12
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 69 4e-12
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 4e-12
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 69 5e-12
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 6e-12
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 7e-12
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 8e-12
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 8e-12
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 9e-12
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 67 3e-11
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 3e-11
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 3e-11
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 66 3e-11
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 3e-11
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 3e-11
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 66 3e-11
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 3e-11
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 65 5e-11
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 5e-11
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 5e-11
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 5e-11
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 65 5e-11
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 5e-11
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 6e-11
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 65 6e-11
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-11
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 7e-11
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 8e-11
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 8e-11
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 8e-11
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 1e-10
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 1e-10
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 64 1e-10
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 64 1e-10
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 64 2e-10
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 63 2e-10
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 2e-10
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 3e-10
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 5e-10
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-10
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 7e-10
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 62 8e-10
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 9e-10
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 9e-10
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 61 1e-09
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 3e-09
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 4e-09
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 4e-09
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 8e-09
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 9e-09
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 1e-08
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 1e-08
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 57 2e-08
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 3e-08
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 56 5e-08
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 54 1e-07
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 54 1e-07
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 54 2e-07
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 54 2e-07
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 3e-07
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 3e-07
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 53 4e-07
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 52 6e-07
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 9e-07
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 1e-06
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 4e-06
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 49 4e-06
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-06
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 6e-06
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 256 bits (655), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 134/356 (37%), Positives = 212/356 (59%), Gaps = 11/356 (3%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
+KGI+ ++V+YN L++GL K G+W +GA LL +M+ + ++P+V TF++L+D F KEG +
Sbjct: 256 TKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQ 315
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A + M+ G+ PN++TYN+L+ GYC+++++ EA + DLMVR C P +VT+ SLI
Sbjct: 316 EANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
G+C VK VD + + + GL + VT++ LV GFCQ GK A+ELF M HG +
Sbjct: 376 KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 435
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXX 243
P++ T ++LDGL +A+ +F ++KS +DL IV+Y +++GMC
Sbjct: 436 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 495
Query: 244 XXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLR 303
+ T+ +MI GLC +G L EA LL +MEE+G PN C+YN + LR
Sbjct: 496 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR 555
Query: 304 KLDISRSEKYLQIMKCKGFPVDANTTELLICI-----------YSANKGDNAFQEL 348
D++ S K ++ MK GF DA++ +++I + Y +KG + Q+L
Sbjct: 556 DGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCLSKGSKSRQDL 611
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 155/313 (49%), Gaps = 3/313 (0%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G +P ++N LI+GLF G+ E L+ M++ G PDV T++ +V+G + G S A
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 212
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ M V+ +V TY+++I C ++ A+ +F M +G SVVTYNSL+ G
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
CK + LL +MV+ + P+V+T+ L+ F + GK A EL+ M G PN
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+ T ++DG SEA ++ M ++ DIV + ++ G C
Sbjct: 333 IITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFR 392
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
+ T++I+++G C G + AEEL M +G P+ +Y + + GL
Sbjct: 393 NISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL---C 449
Query: 306 DISRSEKYLQIMK 318
D + EK L+I +
Sbjct: 450 DNGKLEKALEIFE 462
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 165/382 (43%), Gaps = 39/382 (10%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCV 68
P++V ++ + + ++ ++ G+ ++ T +I+++ F + A V
Sbjct: 86 PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
+G ++ +G EP+ T+N+LI G L ++ EA+ + D MV GC P VVTYNS+++G C+
Sbjct: 146 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 205
Query: 129 VKD-----------------------------------VDRAICLLGEMVNEGLKPDVVT 153
D +D AI L EM +G+K VVT
Sbjct: 206 SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 265
Query: 154 WTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAME 213
+ +LV G C+ GK L M VPN+ T V+LD K EA L++ M
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 214 KSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLD 273
I +I+ YN ++DG C D TF +I+G C +D
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385
Query: 274 EAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLI 333
+ ++ + + G N +Y++ V G + I +E+ Q M G D T +L+
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445
Query: 334 CIYSAN----KGDNAFQELQQN 351
N K F++LQ++
Sbjct: 446 DGLCDNGKLEKALEIFEDLQKS 467
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 99/195 (50%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
+ +G+ V+Y+ L+QG + G+ K L EM+ GV+PDV T+ IL+DG G +
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 454
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
A + + ++ +V Y ++I G C ++E+A +F + +G P+V+TY +
Sbjct: 455 EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 514
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
I G CK + A LL +M +G P+ T+ L+ + G A+ +L MK G
Sbjct: 515 ISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 574
Query: 183 VPNLQTCTVILDGLF 197
+ + +++D L
Sbjct: 575 SADASSIKMVIDMLL 589
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 95/222 (42%), Gaps = 9/222 (4%)
Query: 89 GGYCLRHQM---------EEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLL 139
G C R ++ ++A+ +F M+R LPS+V ++ + K + +
Sbjct: 52 GNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFC 111
Query: 140 GEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKC 199
++ G+ ++ T ++ FC+ K A + + + G P+ T ++ GLF
Sbjct: 112 KQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLE 171
Query: 200 RFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTF 259
SEA+ L M ++ D+V YN +++G+C D +T+
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 231
Query: 260 NIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGL 301
+ +I LC +G +D A L ME G + +YN V GL
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL 273
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 251 bits (640), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 132/344 (38%), Positives = 207/344 (60%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KGI+ +V+Y+ LI GL G+W +GA +L EM+ + ++PDV TFS L+D F KEG +
Sbjct: 274 KGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLE 333
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A+ + M+ G+ P+ +TYNSLI G+C + + EA ++FDLMV +GC P +VTY+ LI+
Sbjct: 334 AKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILIN 393
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
+CK K VD + L E+ ++GL P+ +T+ LV GFCQ GK AAKELF M G P
Sbjct: 394 SYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPP 453
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
++ T ++LDGL ++A+ +F M+KS + L I +YN+++ GMC
Sbjct: 454 SVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLF 513
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
D T+N+MI GLC +G L EA+ L +M+E+GC P+ +YN+ + L
Sbjct: 514 CSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGG 573
Query: 305 LDISRSEKYLQIMKCKGFPVDANTTELLICIYSANKGDNAFQEL 348
+ S + ++ MK GF D++T +++I + S + D +F ++
Sbjct: 574 SGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKSFLDM 617
Score = 144 bits (364), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 159/350 (45%), Gaps = 4/350 (1%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G +P ++++ L+ G GR E L+ M++ PD+ T S L++G +G VS A
Sbjct: 135 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 194
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ MV G +P+ VTY ++ C A+ +F M R SVV Y+ +I
Sbjct: 195 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDS 254
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
CK D A+ L EM +G+K DVVT+++L+GG C GK ++ M +P+
Sbjct: 255 LCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 314
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+ T + ++D K EA L+ M I D + YN ++DG C
Sbjct: 315 VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFD 374
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
D T++I+I C +D+ L + G PN +YN V G +
Sbjct: 375 LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSG 434
Query: 306 DISRSEKYLQIMKCKGFPVDANTTELL---ICIYSA-NKGDNAFQELQQN 351
++ +++ Q M +G P T +L +C NK F+++Q++
Sbjct: 435 KLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKS 484
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 164/346 (47%), Gaps = 4/346 (1%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCV 68
PT + +N L + + ++ G M G+ D+ T +I+++ + ++ + A V
Sbjct: 68 PTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSV 127
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
+G +G EP+ +T+++L+ G+CL ++ EA+ + D MV P +VT ++LI+G C
Sbjct: 128 LGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCL 187
Query: 129 VKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQT 188
V A+ L+ MV G +PD VT+ ++ C+ G A +LF M+E ++
Sbjct: 188 KGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQ 247
Query: 189 CTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXX 248
++++D L K +A+SLF ME I D+V Y+ ++ G+C
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Query: 249 XXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDIS 308
D TF+ +I EG L EA+EL M G P+ +YN + G ++ +
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 367
Query: 309 RSEKYLQIMKCKGFPVDANTTELLICIYSANK----GDNAFQELQQ 350
+ + +M KG D T +LI Y K G F+E+
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS 413
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 108/190 (56%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
SKG +P IV+Y+ LI K R +G L E+ KG++P+ T++ LV GF + G ++
Sbjct: 378 SKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLN 437
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A+ + MV GV P+VVTY L+ G C ++ +A+++F+ M + + YN +I
Sbjct: 438 AAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIII 497
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
HG C VD A L + ++G+KPDVVT+ ++GG C+ G A LF MKE G
Sbjct: 498 HGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCT 557
Query: 184 PNLQTCTVIL 193
P+ T +++
Sbjct: 558 PDDFTYNILI 567
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 117/225 (52%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
++GI P ++YN LI G K E + M+ KG PD+ T+SIL++ + K V
Sbjct: 343 TRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVD 402
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
+ + G+ PN +TYN+L+ G+C ++ A ++F MV RG PSVVTY L+
Sbjct: 403 DGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILL 462
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
G C ++++A+ + +M + + + ++ G C K A LF ++ + G
Sbjct: 463 DGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVK 522
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVML 228
P++ T V++ GL K SEA LFR M++ D YN+++
Sbjct: 523 PDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 246 bits (627), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 129/344 (37%), Positives = 202/344 (58%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KGI I++YN LI G GRW +GA LL +M+++ + P+V TFS+L+D F KEG +
Sbjct: 292 KGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLRE 351
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A + M+H G+ P+ +TY SLI G+C + +++A ++ DLMV +GC P++ T+N LI+
Sbjct: 352 AEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN 411
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G+CK +D + L +M G+ D VT+ L+ GFC++GK AKELF M P
Sbjct: 412 GYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPP 471
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
N+ T ++LDGL +A+ +F +EKS ++LDI +YN+++ GMC
Sbjct: 472 NIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 531
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
T+NIMI GLC +G L EAE L +MEE+G P+ +YN+ + L
Sbjct: 532 CSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGD 591
Query: 305 LDISRSEKYLQIMKCKGFPVDANTTELLICIYSANKGDNAFQEL 348
D ++S K ++ +K GF VDA+T +++I + S + +F ++
Sbjct: 592 GDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKKSFLDM 635
Score = 154 bits (389), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 170/343 (49%), Gaps = 1/343 (0%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCV 68
PT++ ++ L + K ++ L +M KG+ ++ T SI+++ F + + A
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
MG ++ +G EPN +T+++LI G CL ++ EA+++ D MV G P ++T N+L++G C
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205
Query: 129 VKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQT 188
A+ L+ +MV G +P+ VT+ ++ C+ G+ A EL M+E +
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 189 CTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXX 248
++I+DGL K A +LF ME I +I+ YN+++ G C
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 249 XXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDIS 308
+ TF+++I EG L EAEEL M G P+ +Y + G ++ +
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 309 RSEKYLQIMKCKGFPVDANTTELLICIY-SANKGDNAFQELQQ 350
++ + + +M KG + T +LI Y AN+ D+ + ++
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRK 428
Score = 144 bits (364), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 168/384 (43%), Gaps = 50/384 (13%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G +P ++++ LI GL GR E L+ M++ G PD+ T + LV+G G + A
Sbjct: 153 GYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEA 212
Query: 66 RCVMGFMVHVGVEPNVVTYNS-----------------------------------LIGG 90
++ MV G +PN VTY +I G
Sbjct: 213 MLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 91 YCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPD 150
C ++ A +F+ M +G +++TYN LI G+C D LL +M+ + P+
Sbjct: 273 LCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPN 332
Query: 151 VVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFR 210
VVT++ L+ F + GK A+EL M G P+ T T ++DG K +A +
Sbjct: 333 VVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVD 392
Query: 211 AMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEG 270
M D +I +N++++G C DT T+N +I+G C G
Sbjct: 393 LMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 452
Query: 271 LLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTE 330
L+ A+EL M PPN +Y + + GL D SEK L+I + ++ + E
Sbjct: 453 KLNVAKELFQEMVSRKVPPNIVTYKILLDGL---CDNGESEKALEIFE----KIEKSKME 505
Query: 331 LLICIY--------SANKGDNAFQ 346
L I IY +A+K D+A+
Sbjct: 506 LDIGIYNIIIHGMCNASKVDDAWD 529
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 119/227 (52%), Gaps = 2/227 (0%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
SKG P I ++N LI G K R +G L +M +GV+ D T++ L+ GF + G ++
Sbjct: 396 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 455
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A+ + MV V PN+VTY L+ G C + E+A+++F+ + + + YN +I
Sbjct: 456 VAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIII 515
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFF-TMKEHGQ 182
HG C VD A L + +G+KP V T+ ++GG C+ G PL+ EL F M+E G
Sbjct: 516 HGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKG-PLSEAELLFRKMEEDGH 574
Query: 183 VPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLD 229
P+ T +++ ++++ L +++ +D +++D
Sbjct: 575 APDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVID 621
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 133/311 (42%), Gaps = 36/311 (11%)
Query: 72 MVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKD 131
M+H P V+ ++ L Q + + + M +G ++ T + +I+ +C+ +
Sbjct: 79 MIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRK 138
Query: 132 VDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTV 191
+ A +G+++ G +P+ +T++ L+ G C G+ A EL M E G P+L T
Sbjct: 139 LCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINT 198
Query: 192 ILDGL------------------FKCRFHSE-----------------AMSLFRAMEKSD 216
+++GL + C+ ++ AM L R ME+ +
Sbjct: 199 LVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN 258
Query: 217 IDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAE 276
I LD V Y++++DG+C + T+NI+I G C G D+
Sbjct: 259 IKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGA 318
Query: 277 ELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANT-TELLICI 335
+LL M + PN +++V + +++ + +E+ + M +G D T T L+
Sbjct: 319 KLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 378
Query: 336 YSANKGDNAFQ 346
N D A Q
Sbjct: 379 CKENHLDKANQ 389
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 243 bits (620), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 127/344 (36%), Positives = 201/344 (58%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KG + I+ Y LI+G GRW +GA LL +M+++ + PDV FS L+D F KEG +
Sbjct: 276 KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A + M+ G+ P+ VTY SLI G+C +Q+++A + DLMV +GC P++ T+N LI+
Sbjct: 336 AEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G+CK +D + L +M G+ D VT+ L+ GFC++GK AKELF M P
Sbjct: 396 GYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRP 455
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
++ + ++LDGL +A+ +F +EKS ++LDI +YN+++ GMC
Sbjct: 456 DIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 515
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
D T+NIMI GLC +G L EA+ L +MEE+G PN C+YN+ + L +
Sbjct: 516 CSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGE 575
Query: 305 LDISRSEKYLQIMKCKGFPVDANTTELLICIYSANKGDNAFQEL 348
D ++S K ++ +K GF VDA+T ++++ + S + +F ++
Sbjct: 576 GDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKSFLDM 619
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 168/350 (48%), Gaps = 4/350 (1%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G QP V+Y +++ + K G+ LL +M ++ + D +SI++DG K+G + A
Sbjct: 207 GFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNA 266
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ M G + +++ Y +LI G+C + ++ K+ M++R P VV +++LI
Sbjct: 267 FNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDC 326
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+ K + A L EM+ G+ PD VT+T+L+ GFC+ + A + M G PN
Sbjct: 327 FVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPN 386
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
++T ++++G K + + LFR M + D V YN ++ G C
Sbjct: 387 IRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQ 446
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
D ++ I++ GLC G ++A E+ ++E++ + YN+ +HG+
Sbjct: 447 EMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 506
Query: 306 DISRSEKYLQIMKCKGFPVDANTTELLI---CIY-SANKGDNAFQELQQN 351
+ + + KG D T ++I C S ++ D F++++++
Sbjct: 507 KVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEED 556
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 164/340 (48%), Gaps = 1/340 (0%)
Query: 8 QPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARC 67
+P ++ ++ L + + ++ L +M KG+ ++ T SI+++ + +S A
Sbjct: 69 RPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFS 128
Query: 68 VMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWC 127
MG ++ +G EP+ VT+++LI G CL ++ EA+++ D MV G P+++T N+L++G C
Sbjct: 129 AMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLC 188
Query: 128 KVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQ 187
V A+ L+ MV G +P+ VT+ ++ C+ G+ A EL M+E +
Sbjct: 189 LNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAV 248
Query: 188 TCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXX 247
++I+DGL K A +LF ME DI++Y ++ G C
Sbjct: 249 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM 308
Query: 248 XXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDI 307
D F+ +I EG L EAEEL M + G P+ +Y + G ++ +
Sbjct: 309 IKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQL 368
Query: 308 SRSEKYLQIMKCKGFPVDANTTELLICIY-SANKGDNAFQ 346
++ L +M KG + T +LI Y AN D+ +
Sbjct: 369 DKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLE 408
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 140/306 (45%), Gaps = 2/306 (0%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G +P V+++ LI GL GR E L+ M++ G P + T + LV+G G VS A
Sbjct: 137 GYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDA 196
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ MV G +PN VTY ++ C Q AM++ M R V Y+ +I G
Sbjct: 197 VLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDG 256
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
CK +D A L EM +G K D++ +T L+ GFC G+ +L M + P+
Sbjct: 257 LCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPD 316
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+ + ++D K EA L + M + I D V Y ++DG C
Sbjct: 317 VVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLD 376
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGL--LR 303
+ TFNI+I G C L+D+ EL +M G + +YN + G L
Sbjct: 377 LMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 436
Query: 304 KLDISR 309
KL++++
Sbjct: 437 KLEVAK 442
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 149/329 (45%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KGI + + + +I + + + ++++ G PD TFS L++G EG VS
Sbjct: 101 KGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSE 160
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A ++ MV +G +P ++T N+L+ G CL ++ +A+ + D MV G P+ VTY ++
Sbjct: 161 ALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLK 220
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
CK A+ LL +M +K D V ++ ++ G C+ G A LF M+ G
Sbjct: 221 VMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 280
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
++ T ++ G + L R M K I D+V ++ ++D
Sbjct: 281 DIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELH 340
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
DT T+ +I G C E LD+A +L M GC PN ++N+ ++G +
Sbjct: 341 KEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKA 400
Query: 305 LDISRSEKYLQIMKCKGFPVDANTTELLI 333
I + + M +G D T LI
Sbjct: 401 NLIDDGLELFRKMSLRGVVADTVTYNTLI 429
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 114/226 (50%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
SKG P I ++N LI G K +G L +M +GV+ D T++ L+ GF + G +
Sbjct: 380 SKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLE 439
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A+ + MV V P++V+Y L+ G C + E+A+++F+ + + + YN +I
Sbjct: 440 VAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIII 499
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
HG C VD A L + +G+KPDV T+ ++GG C+ G A LF M+E G
Sbjct: 500 HGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHS 559
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLD 229
PN T +++ +++ L +++ +D +++D
Sbjct: 560 PNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVD 605
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 241 bits (616), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 122/344 (35%), Positives = 199/344 (57%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KG + I++YN LI G GRW +GA LL +M+++ + P+V TFS+L+D F KEG +
Sbjct: 292 KGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLRE 351
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A ++ M+ G+ PN +TYNSLI G+C +++EEA+++ DLM+ +GC P ++T+N LI+
Sbjct: 352 ADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILIN 411
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G+CK +D + L EM G+ + VT+ LV GFCQ GK AK+LF M P
Sbjct: 412 GYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRP 471
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
++ + ++LDGL +A+ +F +EKS ++LDI +Y +++ GMC
Sbjct: 472 DIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLF 531
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
D +NIMI LC + L +A+ L +M E G P+ +YN+ + L
Sbjct: 532 CSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGD 591
Query: 305 LDISRSEKYLQIMKCKGFPVDANTTELLICIYSANKGDNAFQEL 348
D + + + ++ MK GFP D +T +++I + S+ + D +F ++
Sbjct: 592 DDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELDKSFLDM 635
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 171/343 (49%), Gaps = 1/343 (0%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCV 68
PT++ +N L + K +++ L +M KG+ + T SI+++ F + +S A
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
MG ++ +G EP+ V +N+L+ G CL ++ EA+++ D MV G P+++T N+L++G C
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCL 205
Query: 129 VKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQT 188
V A+ L+ MV G +P+ VT+ ++ C+ G+ A EL M+E +
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 189 CTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXX 248
++I+DGL K A +LF ME DI+ YN ++ G C
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 249 XXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDIS 308
+ TF+++I EG L EA++LL M + G PN +YN + G ++ +
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 309 RSEKYLQIMKCKGFPVDANTTELLICIY-SANKGDNAFQELQQ 350
+ + + +M KG D T +LI Y AN+ D+ + ++
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFRE 428
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 147/328 (44%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G +P V +N L+ GL R E L+ M++ G P + T + LV+G G VS A
Sbjct: 153 GYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDA 212
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ MV G +PN VTY ++ C Q AM++ M R V Y+ +I G
Sbjct: 213 VVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
CK +D A L EM +G K D++T+ L+GGFC G+ +L M + PN
Sbjct: 273 LCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 332
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+ T +V++D K EA L + M + I + + YN ++DG C
Sbjct: 333 VVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVD 392
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
D TFNI+I G C +D+ EL M G N +YN V G +
Sbjct: 393 LMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSG 452
Query: 306 DISRSEKYLQIMKCKGFPVDANTTELLI 333
+ ++K Q M + D + ++L+
Sbjct: 453 KLEVAKKLFQEMVSRRVRPDIVSYKILL 480
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 233 bits (593), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 124/346 (35%), Positives = 195/346 (56%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
++KGI+P + +Y+ LI L +GRW + + LL +M+++ + P+V TF+ L+D F KEG +
Sbjct: 267 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKL 326
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
A + M+ ++PN+VTYNSLI G+C+ +++EA ++F LMV + CLP VVTYN+L
Sbjct: 327 IEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTL 386
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
I+G+CK K V + L +M GL + VT+T L+ GF Q A+ +F M G
Sbjct: 387 INGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGV 446
Query: 183 VPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXX 242
PN+ T +LDGL K +AM +F ++KS ++ DI YN+M +GMC
Sbjct: 447 HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWD 506
Query: 243 XXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLL 302
D +N MI G C +GL +EA L ++M+E+G P+ +YN + L
Sbjct: 507 LFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHL 566
Query: 303 RKLDISRSEKYLQIMKCKGFPVDANTTELLICIYSANKGDNAFQEL 348
R D + S + ++ M+ F DA+T L+ + + D F E+
Sbjct: 567 RDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRLDKGFLEV 612
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 147/316 (46%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G P+IV+ N L+ G R E L+ +M++ G PD TF+ LV G + S A
Sbjct: 130 GYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEA 189
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ MV G +P++VTY ++I G C R + + A+ + + M + VV Y+++I
Sbjct: 190 VALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDS 249
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
CK + VD A+ L EM N+G++PDV T+++L+ C G+ A L M E PN
Sbjct: 250 LCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPN 309
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+ T ++D K EA LF M + ID +IV YN +++G C
Sbjct: 310 VVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFT 369
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
D T+N +I G C + + EL M G N +Y +HG +
Sbjct: 370 LMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQAS 429
Query: 306 DISRSEKYLQIMKCKG 321
D ++ + M G
Sbjct: 430 DCDNAQMVFKQMVSDG 445
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 159/325 (48%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCV 68
P+IV ++ L+ + K ++ +M GV ++ T++I+++ + +S A +
Sbjct: 63 PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAI 122
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
+G M+ +G P++VT NSL+ G+C +++ EA+ + D MV G P VT+ +L+HG +
Sbjct: 123 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 182
Query: 129 VKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQT 188
A+ L+ MV +G +PD+VT+ A++ G C+ G+P A L M++ ++
Sbjct: 183 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 242
Query: 189 CTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXX 248
+ ++D L K R +A++LF M+ I D+ Y+ ++ +C
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302
Query: 249 XXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDIS 308
+ TFN +I EG L EAE+L M + PN +YN ++G +
Sbjct: 303 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLD 362
Query: 309 RSEKYLQIMKCKGFPVDANTTELLI 333
+++ +M K D T LI
Sbjct: 363 EAQQIFTLMVSKDCLPDVVTYNTLI 387
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 117/292 (40%), Gaps = 49/292 (16%)
Query: 68 VMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVR-------RGCLPSVVTYN 120
+ G MV P++V ++ L+ MK FDL++ G ++ TYN
Sbjct: 52 LFGEMVKSRPFPSIVEFSKLLSAIA-------KMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 121 SLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEH 180
+I+ C+ + A+ +LG+M+ G P +VT +L+ GFC + A L M E
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 181 GQVPNLQTCTVILDGLFKCRFHSE-----------------------------------A 205
G P+ T T ++ GLF+ SE A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 206 MSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRG 265
++L MEK I+ D+V+Y+ ++D +C D +T++ +I
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 266 LCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIM 317
LC G +A LL M E PN ++N + ++ + +EK M
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 336
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 232 bits (591), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 118/346 (34%), Positives = 200/346 (57%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
++KGI+P +V+YN LI+ L +GRW + + LL +M+++ + P+V TFS L+D F KEG +
Sbjct: 282 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 341
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
A + M+ ++P++ TY+SLI G+C+ +++EA +F+LM+ + C P+VVTYN+L
Sbjct: 342 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 401
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
I G+CK K V+ + L EM GL + VT+ L+ G Q G A+++F M G
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461
Query: 183 VPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXX 242
P++ T +++LDGL K +A+ +F ++KS ++ DI YN+M++GMC
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521
Query: 243 XXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLL 302
+ + MI G C +GL +EA+ L M+E+G PN +YN + L
Sbjct: 522 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARL 581
Query: 303 RKLDISRSEKYLQIMKCKGFPVDANTTELLICIYSANKGDNAFQEL 348
R D + S + ++ M+ GF DA+T ++I + + + ++ E+
Sbjct: 582 RDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEM 627
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 171/384 (44%), Gaps = 39/384 (10%)
Query: 7 IQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGAR 66
I + SYN LI + + +L +MM+ G PD+ T S L++G+ +S A
Sbjct: 111 ISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAV 170
Query: 67 CVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGW 126
++ M + +PN VT+N+LI G L ++ EA+ + D MV RGC P + TY ++++G
Sbjct: 171 ALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGL 230
Query: 127 CKVKDVDRAICLLG-----------------------------------EMVNEGLKPDV 151
CK D+D A+ LL EM N+G++P+V
Sbjct: 231 CKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 290
Query: 152 VTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRA 211
VT+ +L+ C G+ A L M E PN+ T + ++D K EA L+
Sbjct: 291 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350
Query: 212 MEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGL 271
M K ID DI Y+ +++G C + T+N +I+G C
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Query: 272 LDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTEL 331
++E EL M + G N +YN + GL + D ++K + M G P D T +
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470
Query: 332 L---ICIYSA-NKGDNAFQELQQN 351
L +C Y K F+ LQ++
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKS 494
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 126/304 (41%), Gaps = 41/304 (13%)
Query: 68 VMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWC 127
+ G MV P++V +N L+ ++ + + + + M + +YN LI+ +C
Sbjct: 67 LFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFC 126
Query: 128 KVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFC---QVGKPLAAKELFFTMKEHGQVP 184
+ + A+ +LG+M+ G +PD+VT ++L+ G+C ++ + +A + F M+ P
Sbjct: 127 RRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQ---P 183
Query: 185 NLQTCTVILDGLFKCRFHSE-----------------------------------AMSLF 209
N T ++ GLF SE A+SL
Sbjct: 184 NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 243
Query: 210 RAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWE 269
+ MEK I+ D+V+Y ++D +C + T+N +IR LC
Sbjct: 244 KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 303
Query: 270 GLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTT 329
G +A LL M E PN +++ + +++ + +EK M + D T
Sbjct: 304 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 363
Query: 330 ELLI 333
LI
Sbjct: 364 SSLI 367
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 231 bits (589), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 119/342 (34%), Positives = 199/342 (58%), Gaps = 3/342 (0%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
+KGI+P +V+YN LI L +GRW + + LL M++K + P+V TF+ L+D F KEG +
Sbjct: 286 TKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLV 345
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A + M+ ++P+ +TYN LI G+C+ ++++EA ++F MV + CLP++ TYN+LI
Sbjct: 346 EAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLI 405
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
+G+CK K V+ + L EM GL + VT+T ++ GF Q G +A+ +F M +
Sbjct: 406 NGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVP 465
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXX 243
++ T +++L GL A+ +F+ ++KS+++L+I +YN M++GMC
Sbjct: 466 TDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL 525
Query: 244 XXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLR 303
D T+N MI GLC + LL EA++L +M+E+G PN +YN + LR
Sbjct: 526 FCSLSIKP---DVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLR 582
Query: 304 KLDISRSEKYLQIMKCKGFPVDANTTELLICIYSANKGDNAF 345
D + S + ++ M+ GF DA+T L+ + + D +F
Sbjct: 583 DCDRAASAELIKEMRSSGFVGDASTISLVTNMLHDGRLDKSF 624
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 147/296 (49%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
GI + +Y+ I + + +L +MM+ G PD+ T S L++G+ +S A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ MV +G +P+ T+ +LI G L ++ EA+ + D MV+RGC P +VTY ++++G
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
CK D+D A+ LL +M +K +VV + ++ C+ A +LF M+ G PN
Sbjct: 233 LCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN 292
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+ T +++ L S+A L M + I+ ++V +N ++D
Sbjct: 293 VVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHE 352
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGL 301
DT T+N++I G C LDEA+++ M C PN +YN ++G
Sbjct: 353 EMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGF 408
Score = 151 bits (381), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 162/352 (46%), Gaps = 8/352 (2%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G +P IV+ + L+ G R + L+ +M++ G PD TF+ L+ G S A
Sbjct: 148 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEA 207
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ MV G +P++VTY +++ G C R ++ A+ + + M +VV +N++I
Sbjct: 208 VALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDS 267
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
CK + V+ A+ L EM +G++P+VVT+ +L+ C G+ A L M E PN
Sbjct: 268 LCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPN 327
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+ T ++D FK EA L M + ID D + YN++++G C
Sbjct: 328 VVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFK 387
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
+ T+N +I G C +++ EL M + G N +Y + G +
Sbjct: 388 FMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAG 447
Query: 306 DISRSEKYLQIMKCKGFPVDANTTELL---ICIYSANKGDNA---FQELQQN 351
D ++ + M P D T +L +C Y K D A F+ LQ++
Sbjct: 448 DCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYG--KLDTALVIFKYLQKS 497
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 154/325 (47%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCV 68
P+IV +N L+ + K +++ L +M G+ D+ T+SI ++ F + +S A V
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
+ M+ +G EP++VT +SL+ GYC ++ +A+ + D MV G P T+ +LIHG
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 129 VKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQT 188
A+ L+ +MV G +PD+VT+ +V G C+ G A L M+ N+
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 189 CTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXX 248
I+D L K R A+ LF ME I ++V YN +++ +C
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 249 XXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDIS 308
+ TFN +I EG L EAE+L M + P+ +YN+ ++G +
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380
Query: 309 RSEKYLQIMKCKGFPVDANTTELLI 333
+++ + M K + T LI
Sbjct: 381 EAKQMFKFMVSKDCLPNIQTYNTLI 405
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 109/240 (45%)
Query: 62 VSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNS 121
V A + G MV P++V +N L+ ++ E + + + M G + TY+
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 122 LIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHG 181
I+ +C+ + A+ +L +M+ G +PD+VT ++L+ G+C + A L M E G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 182 QVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXX 241
P+ T T ++ GLF SEA++L M + D+V Y +++G+C
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 242 XXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGL 301
+ FN +I LC ++ A +L ME G PN +YN ++ L
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 3/207 (1%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
+ +G+ V+Y +IQG F+ G + +M+ V D+ T+SIL+ G G +
Sbjct: 425 SQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKL 484
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
A + ++ +E N+ YN++I G C ++ EA +DL P VVTYN++
Sbjct: 485 DTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEA---WDLFCSLSIKPDVVTYNTM 541
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
I G C + + A L +M +G P+ T+ L+ + A+ EL M+ G
Sbjct: 542 ISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGF 601
Query: 183 VPNLQTCTVILDGLFKCRFHSEAMSLF 209
V + T +++ + L R +++
Sbjct: 602 VGDASTISLVTNMLHDGRLDKSFLNML 628
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 230 bits (586), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 122/345 (35%), Positives = 192/345 (55%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
+KGI+P +V+Y+ LI L +GRW + + LL +M+++ + PDV TFS L+D F KEG +
Sbjct: 284 TKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLV 343
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A + MV ++P++VTY+SLI G+C+ +++EA ++F+ MV + C P VVTYN+LI
Sbjct: 344 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 403
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
G+CK K V+ + + EM GL + VT+ L+ G Q G A+E+F M G
Sbjct: 404 KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVP 463
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXX 243
PN+ T +LDGL K +AM +F +++S ++ I YN+M++GMC
Sbjct: 464 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 523
Query: 244 XXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLR 303
D +N MI G C +G +EA+ L M+E+G PN YN + LR
Sbjct: 524 FCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLR 583
Query: 304 KLDISRSEKYLQIMKCKGFPVDANTTELLICIYSANKGDNAFQEL 348
D S + ++ M+ GF DA+T L+ + + D +F ++
Sbjct: 584 DGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDM 628
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 158/316 (50%), Gaps = 3/316 (0%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G QP V++N LI GLF + E L+ M+ KG PD+ T+ ++V+G K G A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ M +EP V+ YN++I G C M++A+ +F M +G P+VVTY+SLI
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
C A LL +M+ + PDV T++AL+ F + GK + A++L+ M + P+
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+ T + +++G EA +F M D+V YN ++ G C
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
+T T+NI+I+GL G D A+E+ M +G PPN +YN + GL +
Sbjct: 421 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480
Query: 306 DISRSE---KYLQIMK 318
+ ++ +YLQ K
Sbjct: 481 KLEKAMVVFEYLQRSK 496
Score = 157 bits (398), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 154/328 (46%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G +P IV+ + L+ G R E L+ +M G P+ TF+ L+ G S A
Sbjct: 146 GYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEA 205
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ MV G +P++VTY ++ G C R + A + + M + P V+ YN++I G
Sbjct: 206 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 265
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
CK K +D A+ L EM +G++P+VVT+++L+ C G+ A L M E P+
Sbjct: 266 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 325
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+ T + ++D K EA L+ M K ID IV Y+ +++G C
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 385
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
D T+N +I+G C ++E E+ M + G N +YN+ + GL +
Sbjct: 386 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 445
Query: 306 DISRSEKYLQIMKCKGFPVDANTTELLI 333
D +++ + M G P + T L+
Sbjct: 446 DCDMAQEIFKEMVSDGVPPNIMTYNTLL 473
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 169/346 (48%), Gaps = 4/346 (1%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCV 68
P+I+ ++ L+ + K ++ L +M G+ + T+SIL++ F + + A V
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
+G M+ +G EPN+VT +SL+ GYC ++ EA+ + D M G P+ VT+N+LIHG
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 129 VKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQT 188
A+ L+ MV +G +PD+VT+ +V G C+ G A L M++ P +
Sbjct: 199 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLI 258
Query: 189 CTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXX 248
I+DGL K + +A++LF+ ME I ++V Y+ ++ +C
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 249 XXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDIS 308
D +TF+ +I EG L EAE+L M + P+ +Y+ ++G +
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378
Query: 309 RSEKYLQIMKCKG-FP--VDANTTELLICIYS-ANKGDNAFQELQQ 350
+++ + M K FP V NT C Y +G F+E+ Q
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ 424
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 101/207 (48%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
+ +G+ V+YN LIQGLF+ G + EM+ GV P++ T++ L+DG K G +
Sbjct: 423 SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKL 482
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
A V ++ +EP + TYN +I G C ++E+ +F + +G P VV YN++
Sbjct: 483 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTM 542
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
I G+C+ + A L EM +G P+ + L+ + G A+ EL M+ G
Sbjct: 543 ISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGF 602
Query: 183 VPNLQTCTVILDGLFKCRFHSEAMSLF 209
+ T ++ + L R + +
Sbjct: 603 AGDASTIGLVTNMLHDGRLDKSFLDML 629
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 117/269 (43%)
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A + G MV P+++ ++ L+ ++ + + + + M G + TY+ LI+
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
+C+ + A+ +LG+M+ G +P++VT ++L+ G+C + A L M G P
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
N T ++ GLF SEAM+L M D+V Y V+++G+C
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 244
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
+N +I GLC +D+A L ME G PN +Y+ + L
Sbjct: 245 NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304
Query: 305 LDISRSEKYLQIMKCKGFPVDANTTELLI 333
S + + L M + D T LI
Sbjct: 305 GRWSDASRLLSDMIERKINPDVFTFSALI 333
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 106/238 (44%)
Query: 96 QMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWT 155
++++A+ +F MV+ PS++ ++ L+ K+ D I L +M N G+ + T++
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 156 ALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKS 215
L+ FC+ + A + M + G PN+ T + +L+G + SEA++L M +
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 216 DIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEA 275
+ V +N ++ G+ D T+ +++ GLC G D A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 276 EELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLI 333
LL +ME+ P YN + GL + + + + M+ KG + T LI
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 228 bits (581), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 121/345 (35%), Positives = 196/345 (56%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
+KGI+P +V+Y+ LI L +GRW + + LL +M++K + P++ TF+ L+D F KEG
Sbjct: 288 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 347
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A + M+ ++P++ TYNSL+ G+C+ ++++A ++F+ MV + C P VVTYN+LI
Sbjct: 348 EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 407
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
G+CK K V+ L EM + GL D VT+T L+ G G A+++F M G
Sbjct: 408 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 467
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXX 243
P++ T +++LDGL +A+ +F M+KS+I LDI +Y M++GMC
Sbjct: 468 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 527
Query: 244 XXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLR 303
+ T+N MI GLC + LL EA LL +M+E+G PN +YN + LR
Sbjct: 528 FCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLR 587
Query: 304 KLDISRSEKYLQIMKCKGFPVDANTTELLICIYSANKGDNAFQEL 348
D + S + ++ M+ F DA+T L+ + + D +F ++
Sbjct: 588 DGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFLDM 632
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 152/328 (46%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G +P+IV+ + L+ G R + L+ +M++ G PD TF+ L+ G S A
Sbjct: 150 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 209
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ MV G +PN+VTY ++ G C R + A+ + + M VV +N++I
Sbjct: 210 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDS 269
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
CK + VD A+ L EM +G++P+VVT+++L+ C G+ A +L M E PN
Sbjct: 270 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 329
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
L T ++D K EA L+ M K ID DI YN +++G C
Sbjct: 330 LVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE 389
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
D T+N +I+G C +++ EL M G + +Y + GL
Sbjct: 390 FMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 449
Query: 306 DISRSEKYLQIMKCKGFPVDANTTELLI 333
D ++K + M G P D T +L+
Sbjct: 450 DCDNAQKVFKQMVSDGVPPDIMTYSILL 477
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 132/292 (45%), Gaps = 16/292 (5%)
Query: 8 QPTIVSYNCLIQGLFKFGR-WKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGAR 66
P I + + G+ +GR + G+G E+++ G + D++ L D G
Sbjct: 26 NPRIAPSSIDLCGMCYWGRAFSSGSGDYREILRNG-LHDMK----LDDAIG--------- 71
Query: 67 CVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGW 126
+ G MV P++V +N L+ + + + + + M R + + TYN LI+ +
Sbjct: 72 -LFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCF 130
Query: 127 CKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNL 186
C+ + A+ LLG+M+ G +P +VT ++L+ G+C + A L M E G P+
Sbjct: 131 CRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 190
Query: 187 QTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXX 246
T T ++ GLF SEA++L M + ++V Y V+++G+C
Sbjct: 191 ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNK 250
Query: 247 XXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFV 298
D FN +I LC +D+A L ME G PN +Y+ +
Sbjct: 251 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 302
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 227 bits (579), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 117/344 (34%), Positives = 189/344 (54%), Gaps = 4/344 (1%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KGI P + +YNC+I G FGRW + LL +M+++ + PDV TF+ L+ KEG +
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A + M+H + P+ VTYNS+I G+C ++ ++A +FDLM P VVT+N++I
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIID 440
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
+C+ K VD + LL E+ GL + T+ L+ GFC+V AA++LF M HG P
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 500
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
+ TC ++L G + EA+ LF ++ S IDLD V YN+++ GMC
Sbjct: 501 DTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 560
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
D T+N+MI G C + + +A L +M++NG P+ +YN + G L+
Sbjct: 561 CSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKA 620
Query: 305 LDISRSEKYLQIMKCKGFPVDANTTELLICIYSANKGDNAFQEL 348
+I +S + + M+ GF DA T +++ + + + D +F ++
Sbjct: 621 GEIDKSIELISEMRSNGFSGDAFTIKMVADLITDGRLDKSFSDM 664
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 162/361 (44%), Gaps = 19/361 (5%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+ I I S+N LI+ + ++ + G PDV TF+ L+ G E +S
Sbjct: 135 RRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISE 194
Query: 65 ARCVMGFMVH---------------VGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVR 109
A + G+MV +G+ P V+T+N+LI G CL ++ EA + + MV
Sbjct: 195 ALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVG 254
Query: 110 RGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLA 169
+G VVTY ++++G CK+ D A+ LL +M +KPDVV ++A++ C+ G
Sbjct: 255 KGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSD 314
Query: 170 AKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLD 229
A+ LF M E G PN+ T ++DG S+A L R M + +I+ D++ +N ++
Sbjct: 315 AQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALIS 374
Query: 230 GMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPP 289
DT T+N MI G C D+A+ + M P
Sbjct: 375 ASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASP 430
Query: 290 NRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLICIYSANKGDNAFQELQ 349
+ ++N + R + + L+ + +G + T LI + NA Q+L
Sbjct: 431 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF 490
Query: 350 Q 350
Q
Sbjct: 491 Q 491
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 156/336 (46%), Gaps = 6/336 (1%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+ P ++++N LI GL GR E A L+ +M+ KG+ DV T+ +V+G K G A
Sbjct: 221 GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA 280
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ M ++P+VV Y+++I C +A +F M+ +G P+V TYN +I G
Sbjct: 281 LNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDG 340
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+C A LL +M+ + PDV+T+ AL+ + GK A++L M P+
Sbjct: 341 FCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPD 400
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
T ++ G K +A +F M D+V +N ++D C
Sbjct: 401 TVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQLLR 456
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
+T T+N +I G C L+ A++L M +G P+ + N+ ++G
Sbjct: 457 EISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENE 516
Query: 306 DISRSEKYLQIMKCKGFPVDANTTELLICIYSANKG 341
+ + + ++++ +D +T I I+ KG
Sbjct: 517 KLEEALELFEVIQMS--KIDLDTVAYNIIIHGMCKG 550
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 161/357 (45%), Gaps = 20/357 (5%)
Query: 10 TIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVM 69
T V N +I + R L +M + + ++ +F+IL+ F +S +
Sbjct: 105 TAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTF 164
Query: 70 GFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAM---------------KVFDLMVRRGCLP 114
G + +G +P+VVT+N+L+ G CL ++ EA+ +FD MV G P
Sbjct: 165 GKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTP 224
Query: 115 SVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELF 174
V+T+N+LI+G C V A L+ +MV +GL DVVT+ +V G C++G +A L
Sbjct: 225 VVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLL 284
Query: 175 FTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXX 234
M+E P++ + I+D L K HS+A LF M + I ++ YN M+DG C
Sbjct: 285 SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 344
Query: 235 XXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSY 294
D TFN +I EG L EAE+L M P+ +Y
Sbjct: 345 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTY 404
Query: 295 NVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLICIY-SANKGDNAFQELQQ 350
N ++G + ++ +M D T +I +Y A + D Q L++
Sbjct: 405 NSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQLLRE 457
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 109/288 (37%), Gaps = 50/288 (17%)
Query: 96 QMEEAMKVFDLMVR------------------RGCLPSVV-----------------TYN 120
+++A+ FD MVR R P V ++N
Sbjct: 86 SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFN 145
Query: 121 SLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFC---QVGKPLA-------- 169
LI +C + ++ G++ G +PDVVT+ L+ G C ++ + LA
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET 205
Query: 170 ----AKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYN 225
A LF M E G P + T +++GL EA +L M + +D+V Y
Sbjct: 206 GFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 226 VMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEEN 285
+++GMC D ++ +I LC +G +A+ L M E
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 286 GCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLI 333
G PN +YN + G S +++ L+ M + D T LI
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 373
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 227 bits (579), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 119/346 (34%), Positives = 198/346 (57%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
++KGI+P + +Y+ LI L +GRW + + LL +M+++ + P+V TFS L+D F KEG +
Sbjct: 285 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 344
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
A + M+ ++P++ TY+SLI G+C+ +++EA +F+LM+ + C P+VVTY++L
Sbjct: 345 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTL 404
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
I G+CK K V+ + L EM GL + VT+T L+ GF Q A+ +F M G
Sbjct: 405 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 464
Query: 183 VPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXX 242
PN+ T ++LDGL K ++AM +F +++S ++ DI YN+M++GMC
Sbjct: 465 HPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWE 524
Query: 243 XXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLL 302
+ +N MI G C +G +EA+ LL +M+E+G PN +YN + L
Sbjct: 525 LFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARL 584
Query: 303 RKLDISRSEKYLQIMKCKGFPVDANTTELLICIYSANKGDNAFQEL 348
R D S + ++ M+ GF DA+T L+ + + D +F ++
Sbjct: 585 RDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDM 630
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 154/328 (46%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G +P IV+ + L+ G R + L+ +M++ G PD TF+ L+ G S A
Sbjct: 148 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEA 207
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ MV G +P++VTY +++ G C R ++ A+ + M + VV YN++I G
Sbjct: 208 VALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDG 267
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
CK K +D A+ L EM N+G++PDV T+++L+ C G+ A L M E PN
Sbjct: 268 LCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPN 327
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+ T + ++D K EA L+ M K ID DI Y+ +++G C
Sbjct: 328 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 387
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
+ T++ +I+G C ++E EL M + G N +Y +HG +
Sbjct: 388 LMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 447
Query: 306 DISRSEKYLQIMKCKGFPVDANTTELLI 333
D ++ + M G + T +L+
Sbjct: 448 DCDNAQMVFKQMVSVGVHPNILTYNILL 475
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 127/307 (41%), Gaps = 35/307 (11%)
Query: 62 VSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNS 121
V A + G MV P++V +N L+ ++ E + + + M G + TY+
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 122 LIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHG 181
I+ +C+ + A+ +L +M+ G +PD+VT ++L+ G+C + A L M E G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 182 QVPNLQTCTVILDGLFKCRFHSE-----------------------------------AM 206
P+ T T ++ GLF SE A+
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 207 SLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGL 266
SL + MEK I+ D+V+YN ++DG+C D +T++ +I L
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 267 CWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDA 326
C G +A LL M E PN +++ + +++ + +EK M + D
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363
Query: 327 NTTELLI 333
T LI
Sbjct: 364 FTYSSLI 370
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 225 bits (574), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 117/346 (33%), Positives = 198/346 (57%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
++KGI+P +V+YN LI+ L +GRW + + LL +M+++ + P+V TFS L+D F KEG +
Sbjct: 283 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 342
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
A + M+ ++P++ TY+SLI G+C+ +++EA +F+LM+ + C P+VVTYN+L
Sbjct: 343 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 402
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
I G+CK K VD + L EM GL + VT+T L+ GF Q + A+ +F M G
Sbjct: 403 IKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGV 462
Query: 183 VPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXX 242
+P++ T +++LDGL A+ +F +++S ++ DI YN+M++GMC
Sbjct: 463 LPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWD 522
Query: 243 XXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLL 302
+ T+ M+ G C +GL +EA+ L M+E G P+ +YN + L
Sbjct: 523 LFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHL 582
Query: 303 RKLDISRSEKYLQIMKCKGFPVDANTTELLICIYSANKGDNAFQEL 348
R D + S + ++ M+ F DA+T L+ + + D +F ++
Sbjct: 583 RDGDKAASAELIREMRSCRFVGDASTIGLVTNMLHDGRLDKSFLKM 628
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 168/342 (49%)
Query: 7 IQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGAR 66
I+P +V YN +I L + + L EM KG+ P+V T++ L+ G S A
Sbjct: 252 IEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 311
Query: 67 CVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGW 126
++ M+ + PNVVT+++LI + ++ EA K++D M++R P + TY+SLI+G+
Sbjct: 312 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 371
Query: 127 CKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNL 186
C +D A + M+++ P+VVT+ L+ GFC+ + ELF M + G V N
Sbjct: 372 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNT 431
Query: 187 QTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXX 246
T T ++ G F+ R A +F+ M + DI+ Y+++LDG+C
Sbjct: 432 VTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEY 491
Query: 247 XXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLD 306
D YT+NIMI G+C G +++ +L + G PN +Y + G RK
Sbjct: 492 LQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGL 551
Query: 307 ISRSEKYLQIMKCKGFPVDANTTELLICIYSANKGDNAFQEL 348
++ + MK +G D+ T LI + + A EL
Sbjct: 552 KEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAEL 593
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 154/328 (46%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G +P IV+ N L+ G R + L+ +M++ G PD TF+ L+ G + S A
Sbjct: 146 GYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEA 205
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ MV G +P++VTY ++ G C R ++ A+ + M + P VV YN++I
Sbjct: 206 VALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDA 265
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
C K+V+ A+ L EM N+G++P+VVT+ +L+ C G+ A L M E PN
Sbjct: 266 LCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPN 325
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+ T + ++D K EA L+ M K ID DI Y+ +++G C
Sbjct: 326 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 385
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
+ T+N +I+G C +DE EL M + G N +Y +HG +
Sbjct: 386 LMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 445
Query: 306 DISRSEKYLQIMKCKGFPVDANTTELLI 333
+ ++ + M G D T +L+
Sbjct: 446 ECDNAQIVFKQMVSDGVLPDIMTYSILL 473
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 145/296 (48%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G QP ++N LI GLF+ R E L+ M+ KG PD+ T+ I+V+G K G + A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ M +EP VV YN++I C + +A+ +F M +G P+VVTYNSLI
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
C A LL +M+ + P+VVT++AL+ F + GK + A++L+ M + P+
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+ T + +++G EA +F M D ++V YN ++ G C
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGL 301
+T T+ +I G D A+ + +M +G P+ +Y++ + GL
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGL 476
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 124/301 (41%), Gaps = 35/301 (11%)
Query: 68 VMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWC 127
+ G MV P++V ++ L+ ++ + + + + M G ++ TY+ LI+ +C
Sbjct: 68 LFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFC 127
Query: 128 KVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQ 187
+ + A+ +L +M+ G +PD+VT +L+ GFC + A L M E G P+
Sbjct: 128 RRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSF 187
Query: 188 TCTVILDGLFKCRFHSE-----------------------------------AMSLFRAM 212
T ++ GLF+ SE A+SL + M
Sbjct: 188 TFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKM 247
Query: 213 EKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLL 272
E+ I+ +V+YN ++D +C + T+N +IR LC G
Sbjct: 248 EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 307
Query: 273 DEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELL 332
+A LL M E PN +++ + +++ + +EK M + D T L
Sbjct: 308 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 367
Query: 333 I 333
I
Sbjct: 368 I 368
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 103/238 (43%)
Query: 96 QMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWT 155
++++A+ +F MV+ PS+V ++ L+ K+ D I L +M N G+ ++ T++
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 156 ALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKS 215
L+ FC+ + A + M + G P++ T +L+G S+A+SL M +
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 216 DIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEA 275
D +N ++ G+ D T+ I++ GLC G +D A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 276 EELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLI 333
LL +ME+ P YN + L +++ + M KG + T LI
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 119/345 (34%), Positives = 195/345 (56%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
+KGI+P +V+Y+ LI L +GRW + + LL +M++K + P++ TF+ L+D F KEG
Sbjct: 213 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 272
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A + M+ ++P++ TYNSLI G+C+ ++++A ++F+ MV + C P + TYN+LI
Sbjct: 273 EAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLI 332
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
G+CK K V+ L EM + GL D VT+T L+ G G A+++F M G
Sbjct: 333 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 392
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXX 243
P++ T +++LDGL +A+ +F M+KS+I LDI +Y M++GMC
Sbjct: 393 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 452
Query: 244 XXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLR 303
+ T+N MI GLC + LL EA LL +M+E+G P+ +YN + LR
Sbjct: 453 FCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLR 512
Query: 304 KLDISRSEKYLQIMKCKGFPVDANTTELLICIYSANKGDNAFQEL 348
D + S + ++ M+ F DA+T L+ + + D +F ++
Sbjct: 513 DGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFLDM 557
Score = 160 bits (406), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 151/328 (46%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G +P+IV+ + L+ G R + L+ +M++ G PD TF+ L+ G S A
Sbjct: 75 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 134
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ MV G +PN+VTY ++ G C R ++ A + + M VV +N++I
Sbjct: 135 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDS 194
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
CK + VD A+ L EM +G++P+VVT+++L+ C G+ A +L M E PN
Sbjct: 195 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 254
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
L T ++D K EA L M K ID DI YN +++G C
Sbjct: 255 LVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE 314
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
D T+N +I+G C +++ EL M G + +Y + GL
Sbjct: 315 FMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 374
Query: 306 DISRSEKYLQIMKCKGFPVDANTTELLI 333
D ++K + M G P D T +L+
Sbjct: 375 DCDNAQKVFKQMVSDGVPPDIMTYSILL 402
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 138/297 (46%)
Query: 37 MMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQ 96
M++ +P + F+ L+ K + M +G+ N+ TYN LI +C R Q
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 97 MEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTA 156
+ A+ + M++ G PS+VT +SL++G+C K + A+ L+ +MV G +PD +T+T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 157 LVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSD 216
L+ G K A L M + G PNL T V+++GL K A +L ME +
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 217 IDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAE 276
I+ D+V++N ++D +C + T++ +I LC G +A
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 277 ELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLI 333
+LL M E PN ++N + +++ +EK M + D T LI
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 297
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 223 bits (567), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 119/336 (35%), Positives = 183/336 (54%), Gaps = 7/336 (2%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KGI P + +YNC+I G FGRW + LL +M+++ + PDV TF+ L+ KEG +
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A + M+H + P+ VTYNS+I G+C ++ ++A +FDLM P VVT+N++I
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIID 440
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
+C+ K VD + LL E+ GL + T+ L+ GFC+V AA++LF M HG P
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 500
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
+ TC ++L G + EA+ LF ++ S IDLD V YN+++ GMC
Sbjct: 501 DTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 560
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
D T+N+MI G C + + +A L +M++NG P+ +YN + G L+
Sbjct: 561 CSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKA 620
Query: 305 LDISRSEKYLQIMKCKGFPVDANT---TELLICIYS 337
+I +S + + M+ GF DA T E +IC S
Sbjct: 621 GEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVS 656
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 162/361 (44%), Gaps = 19/361 (5%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+ I I S+N LI+ + ++ + G PDV TF+ L+ G E +S
Sbjct: 135 RRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISE 194
Query: 65 ARCVMGFMVH---------------VGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVR 109
A + G+MV +G+ P V+T+N+LI G CL ++ EA + + MV
Sbjct: 195 ALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVG 254
Query: 110 RGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLA 169
+G VVTY ++++G CK+ D A+ LL +M +KPDVV ++A++ C+ G
Sbjct: 255 KGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSD 314
Query: 170 AKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLD 229
A+ LF M E G PN+ T ++DG S+A L R M + +I+ D++ +N ++
Sbjct: 315 AQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALIS 374
Query: 230 GMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPP 289
DT T+N MI G C D+A+ + M P
Sbjct: 375 ASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASP 430
Query: 290 NRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLICIYSANKGDNAFQELQ 349
+ ++N + R + + L+ + +G + T LI + NA Q+L
Sbjct: 431 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF 490
Query: 350 Q 350
Q
Sbjct: 491 Q 491
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 156/336 (46%), Gaps = 6/336 (1%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+ P ++++N LI GL GR E A L+ +M+ KG+ DV T+ +V+G K G A
Sbjct: 221 GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA 280
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ M ++P+VV Y+++I C +A +F M+ +G P+V TYN +I G
Sbjct: 281 LNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDG 340
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+C A LL +M+ + PDV+T+ AL+ + GK A++L M P+
Sbjct: 341 FCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPD 400
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
T ++ G K +A +F M D+V +N ++D C
Sbjct: 401 TVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQLLR 456
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
+T T+N +I G C L+ A++L M +G P+ + N+ ++G
Sbjct: 457 EISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENE 516
Query: 306 DISRSEKYLQIMKCKGFPVDANTTELLICIYSANKG 341
+ + + ++++ +D +T I I+ KG
Sbjct: 517 KLEEALELFEVIQMS--KIDLDTVAYNIIIHGMCKG 550
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 161/357 (45%), Gaps = 20/357 (5%)
Query: 10 TIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVM 69
T V N +I + R L +M + + ++ +F+IL+ F +S +
Sbjct: 105 TAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTF 164
Query: 70 GFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAM---------------KVFDLMVRRGCLP 114
G + +G +P+VVT+N+L+ G CL ++ EA+ +FD MV G P
Sbjct: 165 GKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTP 224
Query: 115 SVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELF 174
V+T+N+LI+G C V A L+ +MV +GL DVVT+ +V G C++G +A L
Sbjct: 225 VVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLL 284
Query: 175 FTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXX 234
M+E P++ + I+D L K HS+A LF M + I ++ YN M+DG C
Sbjct: 285 SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 344
Query: 235 XXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSY 294
D TFN +I EG L EAE+L M P+ +Y
Sbjct: 345 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTY 404
Query: 295 NVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLICIY-SANKGDNAFQELQQ 350
N ++G + ++ +M D T +I +Y A + D Q L++
Sbjct: 405 NSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQLLRE 457
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 109/288 (37%), Gaps = 50/288 (17%)
Query: 96 QMEEAMKVFDLMVR------------------RGCLPSVV-----------------TYN 120
+++A+ FD MVR R P V ++N
Sbjct: 86 SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFN 145
Query: 121 SLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFC---QVGKPLA-------- 169
LI +C + ++ G++ G +PDVVT+ L+ G C ++ + LA
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET 205
Query: 170 ----AKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYN 225
A LF M E G P + T +++GL EA +L M + +D+V Y
Sbjct: 206 GFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 226 VMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEEN 285
+++GMC D ++ +I LC +G +A+ L M E
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 286 GCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLI 333
G PN +YN + G S +++ L+ M + D T LI
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 373
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 111/289 (38%), Positives = 166/289 (57%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KGI+P +V+Y L+ GL RW + A LL +M++K + P+V T+S L+D F K G V
Sbjct: 219 KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE 278
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A+ + MV + ++P++VTY+SLI G CL +++EA ++FDLMV +GCL VV+YN+LI+
Sbjct: 279 AKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLIN 338
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G+CK K V+ + L EM GL + VT+ L+ GF Q G A+E F M G P
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 398
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
++ T ++L GL +A+ +F M+K ++DLDIV Y ++ GMC
Sbjct: 399 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCS 293
D T+ M+ GLC +GLL E E L +M++ G N C+
Sbjct: 459 CSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 507
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 162/325 (49%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCV 68
P+IV +N L+ + K ++ L +M G+ D+ TF+I+++ F VS A +
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
+G M+ +G EP+ VT SL+ G+C R+++ +A+ + D MV G P +V YN++I CK
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 129 VKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQT 188
K V+ A E+ +G++P+VVT+TALV G C + A L M + PN+ T
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Query: 189 CTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXX 248
+ +LD K EA LF M + ID DIV Y+ +++G+C
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322
Query: 249 XXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDIS 308
D ++N +I G C +++ +L M + G N +YN + G + D+
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382
Query: 309 RSEKYLQIMKCKGFPVDANTTELLI 333
+++++ M G D T +L+
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILL 407
Score = 161 bits (407), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 153/317 (48%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G +P IV+YN +I L K R + E+ +KG+ P+V T++ LV+G S A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ M+ + PNV+TY++L+ + ++ EA ++F+ MVR P +VTY+SLI+G
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
C +D A + MV++G DVV++ L+ GFC+ + +LF M + G V N
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
T ++ G F+ +A F M+ I DI YN++L G+C
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 424
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
D T+ +IRG+C G ++EA L + G P+ +Y + GL K
Sbjct: 425 DMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484
Query: 306 DISRSEKYLQIMKCKGF 322
+ E MK +G
Sbjct: 485 LLHEVEALYTKMKQEGL 501
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 103/182 (56%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
SKG +VSYN LI G K R ++G L EM Q+G++ + T++ L+ GF + G V
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A+ M G+ P++ TYN L+GG C ++E+A+ +F+ M +R +VTY ++I
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 442
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
G CK V+ A L + +GLKPD+VT+T ++ G C G + L+ MK+ G +
Sbjct: 443 RGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLM 502
Query: 184 PN 185
N
Sbjct: 503 KN 504
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 8/184 (4%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
+ +G+ V+YN LIQG F+ G + +M G+ PD+ T++IL+ G G +
Sbjct: 357 SQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGEL 416
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
A + M ++ ++VTY ++I G C ++EEA +F + +G P +VTY ++
Sbjct: 417 EKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTM 476
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
+ G C + L +M EGL + T + G + EL M G
Sbjct: 477 MSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSD--------GDITLSAELIKKMLSCGY 528
Query: 183 VPNL 186
P+L
Sbjct: 529 APSL 532
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 91/208 (43%)
Query: 96 QMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWT 155
++ +A+ +F MV+ PS+V +N L+ K+K D I L +M G++ D+ T+
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 156 ALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKS 215
++ FC + A + M + G P+ T +++G + S+A+SL M +
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 216 DIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEA 275
DIV YN ++D +C + T+ ++ GLC +A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 276 EELLMRMEENGCPPNRCSYNVFVHGLLR 303
LL M + PN +Y+ + ++
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVK 272
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/291 (36%), Positives = 167/291 (57%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
+ G +P +V+YN L+ GL + GRW + A LL +MM++ + P+V TF+ L+D F K G +
Sbjct: 216 TNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLM 275
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A+ + M+ + V P+V TY SLI G C+ ++EA ++F LM R GC P+ V Y +LI
Sbjct: 276 EAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLI 335
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
HG+CK K V+ + + EM +G+ + +T+T L+ G+C VG+P A+E+F M
Sbjct: 336 HGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAP 395
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXX 243
P+++T V+LDGL +A+ +F M K ++D++IV Y +++ GMC
Sbjct: 396 PDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDL 455
Query: 244 XXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSY 294
+ T+ MI G C GL+ EA+ L +M+E+G PN Y
Sbjct: 456 FCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 166/328 (50%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
GI P + + N ++ + + + L +MM+ G PD+ TF+ L++G+ + A
Sbjct: 113 GIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDA 172
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ ++ +G +PNVVTY +LI C + A+++F+ M G P+VVTYN+L+ G
Sbjct: 173 IALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTG 232
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
C++ A LL +M+ ++P+V+T+TAL+ F +VGK + AKEL+ M + P+
Sbjct: 233 LCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPD 292
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+ T +++GL EA +F ME++ + V+Y ++ G C
Sbjct: 293 VFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFY 352
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
+T T+ ++I+G C G D A+E+ +M PP+ +YNV + GL
Sbjct: 353 EMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNG 412
Query: 306 DISRSEKYLQIMKCKGFPVDANTTELLI 333
+ ++ + M+ + ++ T ++I
Sbjct: 413 KVEKALMIFEYMRKREMDINIVTYTIII 440
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 149/317 (47%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G +P +V+Y LI+ L K L +M G P+V T++ LV G + G A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ M+ +EPNV+T+ +LI + ++ EA +++++M++ P V TY SLI+G
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
C +D A + M G P+ V +T L+ GFC+ + ++F+ M + G V N
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
T TV++ G A +F M DI YNV+LDG+C
Sbjct: 363 TITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFE 422
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
+ T+ I+I+G+C G +++A +L + G PN +Y + G R+
Sbjct: 423 YMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRG 482
Query: 306 DISRSEKYLQIMKCKGF 322
I ++ + MK GF
Sbjct: 483 LIHEADSLFKKMKEDGF 499
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 124/297 (41%), Gaps = 35/297 (11%)
Query: 72 MVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKD 131
MVH P+++ + L+ ++ + + +F+ M G P + T N ++H C
Sbjct: 74 MVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQ 133
Query: 132 VDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTV 191
RA C LG+M+ G +PD+VT+T+L+ G+C + A LF + G PN+ T T
Sbjct: 134 PCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTT 193
Query: 192 ILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXX 251
++ L K R + A+ LF M + ++V YN ++ G+C
Sbjct: 194 LIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRR 253
Query: 252 XXFDTYTF--------------------NIMIR---------------GLCWEGLLDEAE 276
+ TF N+MI+ GLC GLLDEA
Sbjct: 254 IEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEAR 313
Query: 277 ELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLI 333
++ ME NGC PN Y +HG + + K M KG + T +LI
Sbjct: 314 QMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLI 370
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 78/148 (52%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
+ KG+ ++Y LIQG GR + +M + PD++T+++L+DG G V
Sbjct: 355 SQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKV 414
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
A + +M ++ N+VTY +I G C ++E+A +F + +G P+V+TY ++
Sbjct: 415 EKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTM 474
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPD 150
I G+C+ + A L +M +G P+
Sbjct: 475 ISGFCRRGLIHEADSLFKKMKEDGFLPN 502
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 66/118 (55%), Gaps = 2/118 (1%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMP-DVQTFSILVDGFGKEGL 61
+S+ P I +YN L+ GL G+ E A +++E M+K M ++ T++I++ G K G
Sbjct: 390 SSRRAPPDIRTYNVLLDGLCCNGK-VEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGK 448
Query: 62 VSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTY 119
V A + + G++PNV+TY ++I G+C R + EA +F M G LP+ Y
Sbjct: 449 VEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 205 bits (522), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 111/291 (38%), Positives = 168/291 (57%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KGI+ V+YN LI GL GRW + A LL +M+++ + P+V F+ L+D F KEG +
Sbjct: 213 KGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLE 272
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
AR + M+ V PNV TYNSLI G+C+ + +A +FDLMV +GC P VVTYN+LI
Sbjct: 273 ARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLIT 332
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G+CK K V+ + L EM +GL D T+ L+ G+CQ GK A+++F M + G P
Sbjct: 333 GFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSP 392
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
++ T ++LD L +A+ + ++KS++D+DI+ YN+++ G+C
Sbjct: 393 DIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLF 452
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYN 295
D + MI GLC +GL EA++L RM+E+G P+ Y+
Sbjct: 453 RSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 503
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 156/352 (44%), Gaps = 35/352 (9%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G +P+IV+ L+ G + R++E L+ M G +P+V ++ +++G K ++ A
Sbjct: 144 GFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNA 203
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYC-----------LRHQME---------------- 98
V M G+ + VTYN+LI G LR ++
Sbjct: 204 LEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDT 263
Query: 99 --------EAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPD 150
EA ++ M+RR +P+V TYNSLI+G+C + A + MV++G PD
Sbjct: 264 FVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPD 323
Query: 151 VVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFR 210
VVT+ L+ GFC+ + +LF M G V + T ++ G + + A +F
Sbjct: 324 VVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFN 383
Query: 211 AMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEG 270
M + DIV YN++LD +C D T+NI+I+GLC
Sbjct: 384 RMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTD 443
Query: 271 LLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGF 322
L EA L + G P+ +Y + GL RK ++K + MK GF
Sbjct: 444 KLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGF 495
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 170/347 (48%), Gaps = 4/347 (1%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCV 68
P+IV + ++ + K ++ L ++M G+ D+ +F+IL+ F + +S A +
Sbjct: 77 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 136
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
+G M+ +G P++VT SL+ G+C ++ +EA+ + D M G +P+VV YN++I+G CK
Sbjct: 137 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 196
Query: 129 VKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQT 188
+D++ A+ + M +G++ D VT+ L+ G G+ A L M + PN+
Sbjct: 197 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 256
Query: 189 CTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXX 248
T ++D K EA +L++ M + + ++ YN +++G C
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 316
Query: 249 XXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDIS 308
D T+N +I G C +++ +L M G + +YN +HG + ++
Sbjct: 317 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLN 376
Query: 309 RSEKYLQIMKCKGFPVDANTTELLI-CIYSANKGDNAF---QELQQN 351
++K M G D T +L+ C+ + K + A ++LQ++
Sbjct: 377 VAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKS 423
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 148/328 (45%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
GI + S+ LI + R LL +MM+ G P + T L++GF + A
Sbjct: 109 GISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEA 168
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ M G PNVV YN++I G C + A++VF M ++G VTYN+LI G
Sbjct: 169 VSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISG 228
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
A LL +MV + P+V+ +TAL+ F + G L A+ L+ M VPN
Sbjct: 229 LSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPN 288
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+ T +++G +A +F M D+V YN ++ G C
Sbjct: 289 VFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFC 348
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
D +T+N +I G C G L+ A+++ RM + G P+ +YN+ + L
Sbjct: 349 EMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNG 408
Query: 306 DISRSEKYLQIMKCKGFPVDANTTELLI 333
I ++ ++ ++ VD T ++I
Sbjct: 409 KIEKALVMVEDLQKSEMDVDIITYNIII 436
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 113/211 (53%), Gaps = 4/211 (1%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
SKG P +V+YN LI G K R ++G L EM +G++ D T++ L+ G+ + G ++
Sbjct: 317 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLN 376
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A+ V MV GV P++VTYN L+ C ++E+A+ + + + + ++TYN +I
Sbjct: 377 VAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIII 436
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
G C+ + A CL + +G+KPD + + ++ G C+ G A +L MKE G +
Sbjct: 437 QGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFM 496
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEK 214
P+ + I D + + S + L +A +
Sbjct: 497 PSER----IYDETLRDHYTSLSAELIKAAHE 523
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 94/209 (44%)
Query: 96 QMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWT 155
+ ++A +F M++ +PS+V + ++ K+ D I L +M N G+ D+ ++T
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 156 ALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKS 215
L+ FC+ + A L M + G P++ T +L+G + EA+SL +M+
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 216 DIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEA 275
++V+YN +++G+C D T+N +I GL G +A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 276 EELLMRMEENGCPPNRCSYNVFVHGLLRK 304
LL M + PN + + +++
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKE 267
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 107/284 (37%), Positives = 165/284 (58%), Gaps = 3/284 (1%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G++ V+YN L+ GL GRW + A L+ +M+ + ++P+V TF+ ++D F KEG S A
Sbjct: 204 GVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEA 263
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ M V+P+V TYNSLI G C+ +++EA ++ DLMV +GCLP VVTYN+LI+G
Sbjct: 264 MKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLING 323
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+CK K VD L EM GL D +T+ ++ G+ Q G+P AA+E+F M PN
Sbjct: 324 FCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PN 380
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
++T +++L GL +A+ LF M+KS+I+LDI YN+++ GMC
Sbjct: 381 IRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFR 440
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPP 289
D ++ MI G C + D+++ L +M+E+G P
Sbjct: 441 SLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 157/352 (44%), Gaps = 38/352 (10%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G +P +V+ + LI G + R + L+ +M + G PDV ++ ++DG K GLV+ A
Sbjct: 134 GYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDA 193
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYC-----------LRH------------------- 95
+ M GV + VTYNSL+ G C +R
Sbjct: 194 VELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDV 253
Query: 96 -----QMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPD 150
+ EAMK+++ M RR P V TYNSLI+G C VD A +L MV +G PD
Sbjct: 254 FVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPD 313
Query: 151 VVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFR 210
VVT+ L+ GFC+ + +LF M + G V + T I+ G F+ A +F
Sbjct: 314 VVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFS 373
Query: 211 AMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEG 270
M+ +I Y+++L G+C D T+NI+I G+C G
Sbjct: 374 RMDSRP---NIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIG 430
Query: 271 LLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGF 322
+++A +L + G P+ SY + G RK +S+ + M+ G
Sbjct: 431 NVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGL 482
Score = 134 bits (337), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 157/328 (47%), Gaps = 3/328 (0%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
GI + SYN +I L + R+ ++ +MM+ G PDV T S L++GF + V A
Sbjct: 99 GIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDA 158
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ M +G P+VV YN++I G C + +A+++FD M R G VTYNSL+ G
Sbjct: 159 IDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAG 218
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
C A L+ +MV + P+V+T+TA++ F + GK A +L+ M P+
Sbjct: 219 LCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPD 278
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+ T +++GL EA + M D+V YN +++G C
Sbjct: 279 VFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFR 338
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
DT T+N +I+G G D A+E+ RM+ PN +Y++ ++GL
Sbjct: 339 EMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNW 395
Query: 306 DISRSEKYLQIMKCKGFPVDANTTELLI 333
+ ++ + M+ +D T ++I
Sbjct: 396 RVEKALVLFENMQKSEIELDITTYNIVI 423
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 122/228 (53%), Gaps = 3/228 (1%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+ I P ++++ +I K G++ E L EM ++ V PDV T++ L++G G V
Sbjct: 238 RDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDE 297
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A+ ++ MV G P+VVTYN+LI G+C +++E K+F M +RG + +TYN++I
Sbjct: 298 AKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQ 357
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G+ + D A + M + +P++ T++ L+ G C + A LF M++
Sbjct: 358 GYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIEL 414
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMC 232
++ T +++ G+ K +A LFR++ + D+V Y M+ G C
Sbjct: 415 DITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFC 462
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 104/181 (57%), Gaps = 3/181 (1%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
+KG P +V+YN LI G K R EG L EM Q+G++ D T++ ++ G+ + G
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 366
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A+ + M PN+ TY+ L+ G C+ ++E+A+ +F+ M + + TYN +I
Sbjct: 367 AAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVI 423
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
HG CK+ +V+ A L + +GLKPDVV++T ++ GFC+ + + L+ M+E G +
Sbjct: 424 HGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 483
Query: 184 P 184
P
Sbjct: 484 P 484
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 126/283 (44%), Gaps = 4/283 (1%)
Query: 72 MVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKD 131
M+ P++V ++ ++ + + +F M G + +YN +I+ C+
Sbjct: 60 MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 119
Query: 132 VDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTV 191
A+ ++G+M+ G +PDVVT ++L+ GFCQ + A +L M+E G P++
Sbjct: 120 FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 179
Query: 192 ILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXX 251
I+DG K ++A+ LF ME+ + D V YN ++ G+C
Sbjct: 180 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 239
Query: 252 XXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSE 311
+ TF +I EG EA +L M P+ +YN ++GL + ++
Sbjct: 240 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 299
Query: 312 KYLQIMKCKGFPVDANTTELLICIYSANK----GDNAFQELQQ 350
+ L +M KG D T LI + +K G F+E+ Q
Sbjct: 300 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQ 342
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 103/238 (43%)
Query: 96 QMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWT 155
+EE + +F M++ LPS+V ++ ++ K K+ D I L M G+ D+ ++
Sbjct: 49 NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108
Query: 156 ALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKS 215
++ C+ + + A + M + G P++ T + +++G + +A+ L ME+
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168
Query: 216 DIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEA 275
D+V+YN ++DG C D T+N ++ GLC G +A
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228
Query: 276 EELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLI 333
L+ M PN ++ + +++ S + K + M + D T LI
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 286
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 101/287 (35%), Positives = 166/287 (57%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
+KG++P +++Y+ LI L + RW + + LL +M+++ + P+V TF+ L+D F KEG +
Sbjct: 288 NKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLV 347
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A + M+ ++P++ TY+SLI G+C+ +++EA +F+LM+ + C P+VVTYN+LI
Sbjct: 348 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 407
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
+G+CK K +D + L EM GL + VT+T L+ GF Q A+ +F M G
Sbjct: 408 NGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH 467
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXX 243
PN+ T +LDGL K +AM +F +++S ++ I YN+M++GMC
Sbjct: 468 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 527
Query: 244 XXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPN 290
D +N MI G C +GL +EA+ L +M E+G P+
Sbjct: 528 FCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 157/322 (48%)
Query: 7 IQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGAR 66
I+ +V Y+ +I L K+ + L EM KGV P+V T+S L+ S A
Sbjct: 256 IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDAS 315
Query: 67 CVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGW 126
++ M+ + PNVVT+N+LI + ++ EA K++D M++R P + TY+SLI+G+
Sbjct: 316 RLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 375
Query: 127 CKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNL 186
C +D A + M+++ P+VVT+ L+ GFC+ + ELF M + G V N
Sbjct: 376 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNT 435
Query: 187 QTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXX 246
T T ++ G F+ R A +F+ M + +I+ YN +LDG+C
Sbjct: 436 VTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 495
Query: 247 XXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLD 306
YT+NIMI G+C G +++ +L + G P+ YN + G RK
Sbjct: 496 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGL 555
Query: 307 ISRSEKYLQIMKCKGFPVDANT 328
++ + M+ G D+ T
Sbjct: 556 KEEADALFRKMREDGPLPDSGT 577
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 163/346 (47%), Gaps = 1/346 (0%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
GI + +YN LI + + LL +MM+ G P + T S L++G+ +S A
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ MV +G P+ +T+ +LI G L ++ EA+ + D MV+RGC P++VTY +++G
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
CK D+D A LL +M ++ +VV ++ ++ C+ A LF M+ G PN
Sbjct: 235 LCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 294
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+ T + ++ L S+A L M + I+ ++V +N ++D
Sbjct: 295 VITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYD 354
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
D +T++ +I G C LDEA+ + M C PN +YN ++G +
Sbjct: 355 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAK 414
Query: 306 DISRSEKYLQIMKCKGFPVDANT-TELLICIYSANKGDNAFQELQQ 350
I + + M +G + T T L+ + A DNA +Q
Sbjct: 415 RIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 460
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 149/328 (45%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G +P+IV+ + L+ G R + L+ +M++ G PD TF+ L+ G S A
Sbjct: 150 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 209
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ MV G +PN+VTY ++ G C R ++ A + + M +VV Y+++I
Sbjct: 210 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDS 269
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
CK + D A+ L EM N+G++P+V+T+++L+ C + A L M E PN
Sbjct: 270 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPN 329
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+ T ++D K EA L+ M K ID DI Y+ +++G C
Sbjct: 330 VVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 389
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
+ T+N +I G C +DE EL M + G N +Y +HG +
Sbjct: 390 LMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQAR 449
Query: 306 DISRSEKYLQIMKCKGFPVDANTTELLI 333
D ++ + M G + T L+
Sbjct: 450 DCDNAQMVFKQMVSDGVHPNIMTYNTLL 477
Score = 144 bits (363), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 154/316 (48%), Gaps = 3/316 (0%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G +P +++ LI GLF + E L+ M+Q+G P++ T+ ++V+G K G + A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ M +E NVV Y+++I C ++A+ +F M +G P+V+TY+SLI
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
C + A LL +M+ + P+VVT+ AL+ F + GK + A++L+ M + P+
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+ T + +++G EA +F M D ++V YN +++G C
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFR 424
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
+T T+ +I G D A+ + +M +G PN +YN + GL +
Sbjct: 425 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 484
Query: 306 DISRSE---KYLQIMK 318
+ ++ +YLQ K
Sbjct: 485 KLEKAMVVFEYLQRSK 500
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 104/185 (56%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
SK P +V+YN LI G K R EG L EM Q+G++ + T++ L+ GF +
Sbjct: 393 SKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 452
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A+ V MV GV PN++TYN+L+ G C ++E+AM VF+ + R P++ TYN +I
Sbjct: 453 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 512
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
G CK V+ L + +G+KPDV+ + ++ GFC+ G A LF M+E G +
Sbjct: 513 EGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPL 572
Query: 184 PNLQT 188
P+ T
Sbjct: 573 PDSGT 577
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 129/295 (43%), Gaps = 16/295 (5%)
Query: 8 QPTIVSYNCLIQGLFKFGR-WKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGAR 66
P I + + G+ +GR + G+G E+++ G+ L D G
Sbjct: 26 NPRIAPSSIDLCGMCYWGRAFSSGSGDYREILRNGLHS-----MKLDDAIG--------- 71
Query: 67 CVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGW 126
+ G MV P++ +N L+ + + + + + M R G ++ TYN LI+ +
Sbjct: 72 -LFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCF 130
Query: 127 CKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNL 186
C+ + A+ LLG+M+ G +P +VT ++L+ G+C + A L M E G P+
Sbjct: 131 CRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 190
Query: 187 QTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXX 246
T T ++ GLF SEA++L M + ++V Y V+++G+C
Sbjct: 191 ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNK 250
Query: 247 XXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGL 301
+ ++ +I LC D+A L ME G PN +Y+ + L
Sbjct: 251 MEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 305
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/282 (38%), Positives = 158/282 (56%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KG+ +V+YN L+ GL GRW + A +L +MM++ + PDV TF+ L+D F K+G +
Sbjct: 205 KGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDE 264
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A+ + M+ V+PN VTYNS+I G C+ ++ +A K FDLM +GC P+VVTYN+LI
Sbjct: 265 AQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLIS 324
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G+CK + VD + L M EG D+ T+ L+ G+CQVGK A ++F M P
Sbjct: 325 GFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTP 384
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
++ T ++L GL A+ F M +S+ + IV YN+M+ G+C
Sbjct: 385 DIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELF 444
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENG 286
D T+ IMI GLC G EA+EL+ RM+E G
Sbjct: 445 CRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEG 486
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 151/292 (51%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCV 68
P+IV + L+ R++ +M G+ D+ +F+IL+ F + +S A V
Sbjct: 69 PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSV 128
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
+G M+ +G EP++VT+ SL+ G+CL +++ +A + LMV+ G P+VV YN+LI G CK
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCK 188
Query: 129 VKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQT 188
+++ A+ LL EM +GL DVVT+ L+ G C G+ A + M + P++ T
Sbjct: 189 NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT 248
Query: 189 CTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXX 248
T ++D K EA L++ M +S +D + V YN +++G+C
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMA 308
Query: 249 XXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHG 300
+ T+N +I G C ++DE +L RM G + +YN +HG
Sbjct: 309 SKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHG 360
Score = 147 bits (372), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 156/328 (47%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G +P+IV++ L+ G R + L+ M++ G P+V ++ L+DG K G ++ A
Sbjct: 136 GYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIA 195
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ M G+ +VVTYN+L+ G C + +A ++ M++R P VVT+ +LI
Sbjct: 196 LELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDV 255
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+ K ++D A L EM+ + P+ VT+ +++ G C G+ AK+ F M G PN
Sbjct: 256 FVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPN 315
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+ T ++ G K R E M LF+ M + DI YN ++ G C
Sbjct: 316 VVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFC 375
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
D T I++ GLC G ++ A M E+ +YN+ +HGL +
Sbjct: 376 WMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKAD 435
Query: 306 DISRSEKYLQIMKCKGFPVDANTTELLI 333
+ ++ + + +G DA T ++I
Sbjct: 436 KVEKAWELFCRLPVEGVKPDARTYTIMI 463
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 96/180 (53%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
SKG P +V+YN LI G KF EG L M +G D+ T++ L+ G+ + G +
Sbjct: 309 SKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLR 368
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A + +MV V P+++T+ L+ G C+ ++E A+ FD M +V YN +I
Sbjct: 369 VALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMI 428
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
HG CK V++A L + EG+KPD T+T ++ G C+ G A EL MKE G +
Sbjct: 429 HGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGII 488
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 127/282 (45%), Gaps = 4/282 (1%)
Query: 72 MVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKD 131
MVH P++V + L+ + E + M G + ++ LIH +C+
Sbjct: 62 MVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSR 121
Query: 132 VDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTV 191
+ A+ +LG+M+ G +P +VT+ +L+ GFC V + A L M + G PN+
Sbjct: 122 LSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNT 181
Query: 192 ILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXX 251
++DGL K + A+ L MEK + D+V YN +L G+C
Sbjct: 182 LIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRS 241
Query: 252 XXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSE 311
D TF +I +G LDEA+EL M ++ PN +YN ++GL + ++
Sbjct: 242 INPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAK 301
Query: 312 KYLQIMKCKG-FP--VDANTTELLICIYS-ANKGDNAFQELQ 349
K +M KG FP V NT C + ++G FQ +
Sbjct: 302 KTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS 343
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 103/213 (48%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+ P V+YN +I GL GR + M KG P+V T++ L+ GF K +V
Sbjct: 275 SSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDE 334
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
+ M G ++ TYN+LI GYC ++ A+ +F MV R P ++T+ L+H
Sbjct: 335 GMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLH 394
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G C +++ A+ +M +V + ++ G C+ K A ELF + G P
Sbjct: 395 GLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKP 454
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDI 217
+ +T T+++ GL K EA L R M++ I
Sbjct: 455 DARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 194 bits (494), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 173/328 (52%), Gaps = 1/328 (0%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCV 68
PT+ +Y LI+ L R E L+ EM + G+ P++ T+++L+D + AR +
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
+G M+ G+ PNV+TYN+LI GYC R +E+A+ V +LM R P+ TYN LI G+CK
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440
Query: 129 VKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQT 188
+V +A+ +L +M+ + PDVVT+ +L+ G C+ G +A L M + G VP+ T
Sbjct: 441 -SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWT 499
Query: 189 CTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXX 248
T ++D L K + EA LF ++E+ ++ ++V+Y ++DG C
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML 559
Query: 249 XXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDIS 308
++ TFN +I GLC +G L EA L +M + G P + + +H LL+ D
Sbjct: 560 SKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFD 619
Query: 309 RSEKYLQIMKCKGFPVDANTTELLICIY 336
+ Q M G DA+T I Y
Sbjct: 620 HAYSRFQQMLSSGTKPDAHTYTTFIQTY 647
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 159/321 (49%), Gaps = 3/321 (0%)
Query: 14 YNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMV 73
YN L+ L +FG E + EM++ V P++ T++ +V+G+ K G V A + +V
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 74 HVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVD 133
G++P+ TY SLI GYC R ++ A KVF+ M +GC + V Y LIHG C + +D
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 134 RAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVIL 193
A+ L +M ++ P V T+T L+ C + A L M+E G PN+ T TV++
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 194 DGL-FKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXX 252
D L +C+F +A L M + + +++ YN +++G C
Sbjct: 366 DSLCSQCKFE-KARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKL 424
Query: 253 XFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEK 312
+T T+N +I+G C + +A +L +M E P+ +YN + G R + + +
Sbjct: 425 SPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYR 483
Query: 313 YLQIMKCKGFPVDANTTELLI 333
L +M +G D T +I
Sbjct: 484 LLSLMNDRGLVPDQWTYTSMI 504
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 147/299 (49%), Gaps = 1/299 (0%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
S+ + P +YN LI+G K K G+L +M+++ V+PDV T++ L+DG + G
Sbjct: 421 SRKLSPNTRTYNELIKGYCKSNVHK-AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFD 479
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A ++ M G+ P+ TY S+I C ++EEA +FD + ++G P+VV Y +LI
Sbjct: 480 SAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALI 539
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
G+CK VD A +L +M+++ P+ +T+ AL+ G C GK A L M + G
Sbjct: 540 DGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQ 599
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXX 243
P + T T+++ L K A S F+ M S D Y + C
Sbjct: 600 PTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDM 659
Query: 244 XXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLL 302
D +T++ +I+G G + A ++L RM + GC P++ ++ + LL
Sbjct: 660 MAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLL 718
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 167/371 (45%), Gaps = 23/371 (6%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
N +G+ P +Y +I L K R +E L + QKGV P+V ++ L+DG+ K G V
Sbjct: 489 NDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKV 548
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
A ++ M+ PN +T+N+LI G C +++EA + + MV+ G P+V T L
Sbjct: 549 DEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTIL 608
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
IH K D D A +M++ G KPD T+T + +C+ G+ L A+++ M+E+G
Sbjct: 609 IHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGV 668
Query: 183 VPNLQTCTVILDG---LFKCRFHSEAMSLFRAM--EKSDIDLDIVVYNVM---------- 227
P+L T + ++ G L + F + + R E S ++ +++
Sbjct: 669 SPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGS 728
Query: 228 ---LDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEE 284
L M + ++ +I G+C G L AE++ M+
Sbjct: 729 EPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQR 788
Query: 285 N-GCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLIC-IYS---AN 339
N G P+ +N + + + + K + M C G + ++LIC +Y
Sbjct: 789 NEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKE 848
Query: 340 KGDNAFQELQQ 350
+G + FQ L Q
Sbjct: 849 RGTSVFQNLLQ 859
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 134/314 (42%), Gaps = 19/314 (6%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+QPT+ + LI L K G + +M+ G PD T++ + + +EG + A
Sbjct: 597 GLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDA 656
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+M M GV P++ TY+SLI GY Q A V M GC PS T+ SLI
Sbjct: 657 EDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKH 716
Query: 126 WCKVK------------------DVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKP 167
++K + D + LL +MV + P+ ++ L+ G C+VG
Sbjct: 717 LLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNL 776
Query: 168 LAAKELFFTM-KEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNV 226
A+++F M + G P+ +L K + H+EA + M + V
Sbjct: 777 RVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKV 836
Query: 227 MLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENG 286
++ G+ D + I+I G+ +GL++ EL ME+NG
Sbjct: 837 LICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNG 896
Query: 287 CPPNRCSYNVFVHG 300
C + +Y++ + G
Sbjct: 897 CKFSSQTYSLLIEG 910
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 94/192 (48%), Gaps = 8/192 (4%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KG +P + C + + +F E LL +M++ V P+ +++ L+ G + G +
Sbjct: 726 KGSEPEL----CAMSNMMEFDTVVE---LLEKMVEHSVTPNAKSYEKLILGICEVGNLRV 778
Query: 65 ARCVMGFMV-HVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A V M + G+ P+ + +N+L+ C + EA KV D M+ G LP + + LI
Sbjct: 779 AEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLI 838
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
G K + +R + ++ G D + W ++ G + G A ELF M+++G
Sbjct: 839 CGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCK 898
Query: 184 PNLQTCTVILDG 195
+ QT +++++G
Sbjct: 899 FSSQTYSLLIEG 910
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 64/125 (51%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
M+ ++GI P+ + +N L+ K + E A ++ +M+ G +P +++ +L+ G K+G
Sbjct: 786 MQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKG 845
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
V ++ G + + + +I G + +E ++F++M + GC S TY+
Sbjct: 846 EKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYS 905
Query: 121 SLIHG 125
LI G
Sbjct: 906 LLIEG 910
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 194 bits (493), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 107/287 (37%), Positives = 162/287 (56%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
GI P +V+YN LI GL GRW + ++ M ++ + PDV TF+ L+D KEG VS A
Sbjct: 216 GIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEA 275
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
M+ ++P++VTY+ LI G C+ +++EA ++F MV +GC P VVTY+ LI+G
Sbjct: 276 EEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILING 335
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+CK K V+ + L EM G+ + VT+T L+ G+C+ GK A+E+F M G PN
Sbjct: 336 YCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPN 395
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+ T V+L GL +A+ + M+K+ +D DIV YN+++ GMC
Sbjct: 396 IITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYC 455
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRC 292
D +T+ M+ GL +GL EA+ L +M+E+G PN C
Sbjct: 456 SLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNEC 502
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 151/299 (50%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G +P +V YN +I GL K + LL M + G+ PDV T++ L+ G G S A
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ M + P+V T+N+LI ++ EA + ++ M+RR P +VTY+ LI+G
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
C +D A + G MV++G PDVVT++ L+ G+C+ K +LF M + G V N
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
T T+++ G + + A +FR M + +I+ YNV+L G+C
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILA 420
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
D T+NI+IRG+C G + +A ++ + G P+ +Y + GL +K
Sbjct: 421 DMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKK 479
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 172/350 (49%), Gaps = 4/350 (1%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G +P+IV++ L+ G + R + + +M+ G P+V ++ ++DG K V A
Sbjct: 146 GHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNA 205
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ M G+ P+VVTYNSLI G C + +A ++ M +R P V T+N+LI
Sbjct: 206 LDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDA 265
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
K V A EM+ L PD+VT++ L+ G C + A+E+F M G P+
Sbjct: 266 CVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPD 325
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+ T +++++G K + M LF M + + + V Y +++ G C
Sbjct: 326 VVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFR 385
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
+ T+N+++ GLC G +++A +L M++NG + +YN+ + G+ +
Sbjct: 386 RMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAG 445
Query: 306 DISRSEKYLQIMKCKGFPVDANT-TELLICIYSA---NKGDNAFQELQQN 351
+++ + + C+G D T T +++ +Y + D F++++++
Sbjct: 446 EVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKED 495
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 168/360 (46%), Gaps = 35/360 (9%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCV 68
P+I ++ L+ + K ++ L +M G+ ++ T +IL++ F + +S A
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
+G M+ +G EP++VT+ SL+ G+C ++ +A+ +FD MV G P+VV YN++I G CK
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 129 VKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQT 188
K VD A+ LL M +G+ PDVVT+ +L+ G C G+ A + M + P++ T
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 189 CTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXX 248
++D K SEA + M + +D DIV Y++++ G+C
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 249 XXXXXFDTYTFN-----------------------------------IMIRGLCWEGLLD 273
D T++ I+I+G C G L+
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378
Query: 274 EAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLI 333
AEE+ RM G PN +YNV +HGL I ++ L M+ G D T ++I
Sbjct: 379 VAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIII 438
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 120/213 (56%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+ + P IV+Y+ LI GL + R E + M+ KG PDV T+SIL++G+ K V
Sbjct: 285 RSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEH 344
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
+ M GV N VTY LI GYC ++ A ++F MV G P+++TYN L+H
Sbjct: 345 GMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLH 404
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G C +++A+ +L +M G+ D+VT+ ++ G C+ G+ A +++ ++ G +P
Sbjct: 405 GLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMP 464
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDI 217
++ T T ++ GL+K EA +LFR M++ I
Sbjct: 465 DIWTYTTMMLGLYKKGLRREADALFRKMKEDGI 497
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 103/182 (56%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
SKG P +V+Y+ LI G K + + G L EM Q+GV+ + T++IL+ G+ + G ++
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A + MV GV PN++TYN L+ G C ++E+A+ + M + G +VTYN +I
Sbjct: 379 VAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIII 438
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
G CK +V A + + +GL PD+ T+T ++ G + G A LF MKE G +
Sbjct: 439 RGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGIL 498
Query: 184 PN 185
PN
Sbjct: 499 PN 500
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 127/283 (44%), Gaps = 4/283 (1%)
Query: 72 MVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKD 131
MV P++ ++ L+ + + + +++ M G ++ T N L++ +C+
Sbjct: 72 MVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQ 131
Query: 132 VDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTV 191
+ A+ LG+M+ G +P +VT+ +L+ GFC+ + A +F M G PN+
Sbjct: 132 LSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNT 191
Query: 192 ILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXX 251
I+DGL K + A+ L MEK I D+V YN ++ G+C
Sbjct: 192 IIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKRE 251
Query: 252 XXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSE 311
D +TFN +I EG + EAEE M P+ +Y++ ++GL + +E
Sbjct: 252 IYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAE 311
Query: 312 KYLQIMKCKGFPVDANTTELLICIYSANK----GDNAFQELQQ 350
+ M KG D T +LI Y +K G F E+ Q
Sbjct: 312 EMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQ 354
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 112/245 (45%), Gaps = 3/245 (1%)
Query: 96 QMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWT 155
++++++ +F MV+ LPS+ ++ L+ K+K D I L +M G+ ++ T
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 156 ALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKS 215
L+ FC+ + A M + G P++ T +L+G + +A+ +F M
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 216 DIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEA 275
++V+YN ++DG+C D T+N +I GLC G +A
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 276 EELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLI-- 333
++ M + P+ ++N + +++ +S +E++ + M + D T LLI
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300
Query: 334 -CIYS 337
C+YS
Sbjct: 301 LCMYS 305
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 192 bits (487), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 109/302 (36%), Positives = 163/302 (53%), Gaps = 3/302 (0%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
GI+P +V Y L+ GL GRW++ LL M ++ + PDV TF+ L+D F KEG A
Sbjct: 207 GIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDA 266
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ M+ + + PN+ TY SLI G+C+ ++EA ++F LM +GC P VV Y SLI+G
Sbjct: 267 EELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLING 326
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+CK K VD A+ + EM +GL + +T+T L+ GF QVGKP A+E+F M G PN
Sbjct: 327 FCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPN 386
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDID---LDIVVYNVMLDGMCXXXXXXXXXX 242
++T V+L L +A+ +F M+K ++D +I YNV+L G+C
Sbjct: 387 IRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALM 446
Query: 243 XXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLL 302
T+ I+I+G+C G + A L + G PN +Y + GL
Sbjct: 447 VFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLF 506
Query: 303 RK 304
R+
Sbjct: 507 RE 508
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 162/346 (46%), Gaps = 4/346 (1%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCV 68
P+I+ + L+ + K ++ L + GV D+ T ++L++ F + A
Sbjct: 70 PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSF 129
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
+G M+ +G EP++VT+ SLI G+CL ++MEEAM + + MV G P VV Y ++I CK
Sbjct: 130 LGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCK 189
Query: 129 VKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQT 188
V+ A+ L +M N G++PDVV +T+LV G C G+ A L M + P++ T
Sbjct: 190 NGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVIT 249
Query: 189 CTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXX 248
++D K +A L+ M + I +I Y +++G C
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLME 309
Query: 249 XXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDIS 308
D + +I G C +D+A ++ M + G N +Y + G + +
Sbjct: 310 TKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPN 369
Query: 309 RSEKYLQIMKCKGFPVDANTTELLI-CIYSANKGDNA---FQELQQ 350
+++ M +G P + T +L+ C+ K A F+++Q+
Sbjct: 370 VAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQK 415
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 140/296 (47%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+ + + N L+ + + + L +MM+ G PD+ TF+ L++GF + A
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ MV +G++P+VV Y ++I C + A+ +FD M G P VV Y SL++G
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
C A LL M +KPDV+T+ AL+ F + GK L A+EL+ M PN
Sbjct: 222 LCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPN 281
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+ T T +++G EA +F ME D+V Y +++G C
Sbjct: 282 IFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFY 341
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGL 301
+T T+ +I+G G + A+E+ M G PPN +YNV +H L
Sbjct: 342 EMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCL 397
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 121/218 (55%), Gaps = 3/218 (1%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
+KG P +V+Y LI G K + + + YEM QKG+ + T++ L+ GFG+ G +
Sbjct: 310 TKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPN 369
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRR---GCLPSVVTYN 120
A+ V MV GV PN+ TYN L+ C ++++A+ +F+ M +R G P++ TYN
Sbjct: 370 VAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYN 429
Query: 121 SLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEH 180
L+HG C +++A+ + +M + ++T+T ++ G C+ GK A LF ++
Sbjct: 430 VLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSK 489
Query: 181 GQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDID 218
G PN+ T T ++ GLF+ EA LFR M++ +
Sbjct: 490 GVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 91/209 (43%)
Query: 96 QMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWT 155
Q EA+ +F MV LPS++ + L++ K+K D I L + G+ D+ T
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 156 ALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKS 215
L+ FCQ +P A M + G P++ T T +++G EAMS+ M +
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 216 DIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEA 275
I D+V+Y ++D +C D + ++ GLC G +A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 276 EELLMRMEENGCPPNRCSYNVFVHGLLRK 304
+ LL M + P+ ++N + +++
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKE 260
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 191 bits (484), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 100/274 (36%), Positives = 154/274 (56%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+GI P +V+Y+ LI GL K GR + L+EM K + P+V TFS L+D + K G +S
Sbjct: 77 RGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSK 136
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
V M+ + ++PNV TY+SLI G C+ ++++EA+K+ DLM+ +GC P+VVTY++L +
Sbjct: 137 VDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLAN 196
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G+ K VD I LL +M G+ + V+ L+ G+ Q GK A +F M +G +P
Sbjct: 197 GFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIP 256
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
N+++ ++L GLF +A+S F M+K+ DLDI+ Y +M+ GMC
Sbjct: 257 NIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLF 316
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEEL 278
D + IMI L G+ EA+ L
Sbjct: 317 YKLKFKRVEPDFKAYTIMIAELNRAGMRTEADAL 350
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 143/298 (47%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
GI+ +V LI L K +L M +G+ P+V T+S L+ G K G ++ A
Sbjct: 43 GIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADA 102
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ M + PNV+T+++LI Y R ++ + V+ +M++ P+V TY+SLI+G
Sbjct: 103 ERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYG 162
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
C VD AI +L M+++G P+VVT++ L GF + + +L M + G N
Sbjct: 163 LCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAAN 222
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+C ++ G F+ A+ +F M + + +I YN++L G+
Sbjct: 223 TVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFE 282
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLR 303
D T+ IMI G+C ++ EA +L +++ P+ +Y + + L R
Sbjct: 283 HMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNR 340
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 139/300 (46%)
Query: 34 LYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCL 93
+ +MM+ G+ PD+ T S LV+GF + A V G M +G++ +VV LI C
Sbjct: 1 MLKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCK 60
Query: 94 RHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVT 153
+ A++V M RG P+VVTY+SLI G CK + A L EM ++ + P+V+T
Sbjct: 61 NRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVIT 120
Query: 154 WTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAME 213
++AL+ + + GK ++ M + PN+ T + ++ GL EA+ + M
Sbjct: 121 FSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMI 180
Query: 214 KSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLD 273
++V Y+ + +G +T + N +I+G G +D
Sbjct: 181 SKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKID 240
Query: 274 EAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLI 333
A + M NG PN SYN+ + GL ++ ++ + M+ +D T ++I
Sbjct: 241 LALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMI 300
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 91/177 (51%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
SKG P +V+Y+ L G FK R +G LL +M Q+GV + + + L+ G+ + G +
Sbjct: 181 SKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKID 240
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A V G+M G+ PN+ +YN ++ G ++E+A+ F+ M + ++TY +I
Sbjct: 241 LALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMI 300
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEH 180
HG CK V A L ++ + ++PD +T ++ + G A L ++H
Sbjct: 301 HGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNRFYQKH 357
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 189 bits (480), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 90/229 (39%), Positives = 150/229 (65%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
+KG++P +++Y+ LI L +GRW + + LL +M+++ + P++ TFS L+D F K+G +
Sbjct: 281 NKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLV 340
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A + M+ ++PN+ TY+SLI G+C+ ++ EA ++ +LM+R+ CLP+VVTYN+LI
Sbjct: 341 KAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLI 400
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
+G+CK K VD+ + L EM GL + VT+T L+ GF Q A+ +F M G
Sbjct: 401 NGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVH 460
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMC 232
PN+ T ++LDGL K ++AM +F +++S ++ DI YN+M++GMC
Sbjct: 461 PNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 509
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 152/328 (46%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G +P IV+ N L+ G R + L+ +M++ G PD TF+ L+ G S A
Sbjct: 143 GYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEA 202
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ MV G +P++VTY +++ G C R + A+ + + M +VV Y+++I
Sbjct: 203 VALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDS 262
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
CK + D A+ L EM N+G++P+V+T+++L+ C G+ A L M E PN
Sbjct: 263 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPN 322
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
L T + ++D K +A L+ M K ID +I Y+ +++G C
Sbjct: 323 LVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLE 382
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
+ T+N +I G C +D+ EL M + G N +Y +HG +
Sbjct: 383 LMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 442
Query: 306 DISRSEKYLQIMKCKGFPVDANTTELLI 333
D ++ + M G + T +L+
Sbjct: 443 DCDNAQMVFKQMVSVGVHPNILTYNILL 470
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 138/264 (52%)
Query: 7 IQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGAR 66
I+ +V Y+ +I L K+ + L EM KGV P+V T+S L+ G S A
Sbjct: 249 IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDAS 308
Query: 67 CVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGW 126
++ M+ + PN+VT+++LI + + ++ +A K+++ M++R P++ TY+SLI+G+
Sbjct: 309 RLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGF 368
Query: 127 CKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNL 186
C + + A +L M+ + P+VVT+ L+ GFC+ + ELF M + G V N
Sbjct: 369 CMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNT 428
Query: 187 QTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXX 246
T T ++ G F+ R A +F+ M + +I+ YN++LDG+C
Sbjct: 429 VTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEY 488
Query: 247 XXXXXXXFDTYTFNIMIRGLCWEG 270
D YT+NIMI G+C G
Sbjct: 489 LQRSTMEPDIYTYNIMIEGMCKAG 512
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 156/328 (47%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G +P V++ LI GLF + E L+ M+Q+G PD+ T+ +V+G K G A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ M +E NVV Y+++I C ++A+ +F M +G P+V+TY+SLI
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
C A LL +M+ + P++VT++AL+ F + GK + A++L+ M + PN
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPN 357
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+ T + +++G EA + M + D ++V YN +++G C
Sbjct: 358 IFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFR 417
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
+T T+ +I G D A+ + +M G PN +YN+ + GL +
Sbjct: 418 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 477
Query: 306 DISRSEKYLQIMKCKGFPVDANTTELLI 333
++++ + ++ D T ++I
Sbjct: 478 KLAKAMVVFEYLQRSTMEPDIYTYNIMI 505
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 137/292 (46%), Gaps = 6/292 (2%)
Query: 29 EGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGF---MVHVGVEPNVVTYN 85
+ GL M Q P + FS L+ K ++ V+ F M +G+ N+ TYN
Sbjct: 61 DAIGLFGVMAQSRPFPSIIEFSKLLSAIAK---MNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 86 SLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNE 145
LI +C ++ A+ + M++ G P +VT NSL++G+C + A+ L+ +MV
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 146 GLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEA 205
G KPD VT+T L+ G K A L M + G P+L T +++GL K A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 206 MSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRG 265
++L ME + I+ ++V+Y+ ++D +C + T++ +I
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 266 LCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIM 317
LC G +A LL M E PN +++ + ++K + ++EK + M
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEM 349
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 95/241 (39%), Gaps = 35/241 (14%)
Query: 96 QMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICL----------------- 138
++++A+ +F +M + PS++ ++ L+ K+ D I
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 139 ------------------LGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEH 180
LG+M+ G +PD+VT +L+ GFC + A L M E
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 181 GQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXX 240
G P+ T T ++ GLF SEA++L M + D+V Y +++G+C
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 241 XXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHG 300
+ ++ +I LC D+A L ME G PN +Y+ +
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 301 L 301
L
Sbjct: 298 L 298
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 49/90 (54%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
+ +G+ V+Y LI G F+ + +M+ GV P++ T++IL+DG K G +
Sbjct: 420 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL 479
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYC 92
+ A V ++ +EP++ TYN +I G C
Sbjct: 480 AKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 509
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 105/285 (36%), Positives = 158/285 (55%), Gaps = 1/285 (0%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
GI+P +V+YN LI LF G W A +L +MM+ G+ PDV TFS L+D +GKEG + A
Sbjct: 214 GIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEA 273
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ M+ V PN+VTYNSLI G C+ ++EA KV +++V +G P+ VTYN+LI+G
Sbjct: 274 KKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLING 333
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+CK K VD + +L M +G+ D T+ L G+CQ GK AA+++ M G P+
Sbjct: 334 YCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPD 393
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+ T ++LDGL +A+ ++KS + I+ YN+++ G+C
Sbjct: 394 MYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFC 453
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRME-ENGCPP 289
D T+ M+ GL + L EA EL +M+ E+G P
Sbjct: 454 SLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 156/325 (48%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCV 68
P+IV ++ L+ + K +++ L + G+ D+ +F+ L+D F + +S A
Sbjct: 77 PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSC 136
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
+G M+ +G EP++VT+ SL+ G+C ++ EAM + D +V G P+VV YN++I C+
Sbjct: 137 LGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 196
Query: 129 VKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQT 188
V+ A+ +L M G++PDVVT+ +L+ G + + M G P++ T
Sbjct: 197 KGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVIT 256
Query: 189 CTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXX 248
+ ++D K EA + M + ++ +IV YN +++G+C
Sbjct: 257 FSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLV 316
Query: 249 XXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDIS 308
+ T+N +I G C +D+ ++L M +G + +YN G + S
Sbjct: 317 SKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFS 376
Query: 309 RSEKYLQIMKCKGFPVDANTTELLI 333
+EK L M G D T +L+
Sbjct: 377 AAEKVLGRMVSCGVHPDMYTFNILL 401
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 144/299 (48%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G +P +V YN +I L + G+ +L M + G+ PDV T++ L+ G +
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ M+ +G+ P+V+T+++LI Y Q+ EA K ++ M++R P++VTYNSLI+G
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLING 298
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
C +D A +L +V++G P+ VT+ L+ G+C+ + ++ M G +
Sbjct: 299 LCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGD 358
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
T + G + S A + M + D+ +N++LDG+C
Sbjct: 359 TFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLE 418
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
T+NI+I+GLC +++A L + G P+ +Y + GL RK
Sbjct: 419 DLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRK 477
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 139/296 (46%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
GI + S+ LI + R L +MM+ G P + TF LV+GF A
Sbjct: 109 GISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEA 168
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ +V +G EPNVV YN++I C + Q+ A+ V M + G P VVTYNSLI
Sbjct: 169 MSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITR 228
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+ +L +M+ G+ PDV+T++AL+ + + G+ L AK+ + M + PN
Sbjct: 229 LFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPN 288
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+ T +++GL EA + + + V YN +++G C
Sbjct: 289 IVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILC 348
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGL 301
DT+T+N + +G C G AE++L RM G P+ ++N+ + GL
Sbjct: 349 VMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGL 404
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 105/212 (49%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+ + P IV+YN LI GL G E +L ++ KG P+ T++ L++G+ K V
Sbjct: 283 RSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDD 342
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
++ M GV+ + TYN+L GYC + A KV MV G P + T+N L+
Sbjct: 343 GMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLD 402
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G C + +A+ L ++ ++T+ ++ G C+ K A LF ++ G P
Sbjct: 403 GLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSP 462
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSD 216
++ T ++ GL + R EA L+R M+K D
Sbjct: 463 DVITYITMMIGLRRKRLWREAHELYRKMQKED 494
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 138/307 (44%)
Query: 26 RWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYN 85
++ + L +M + +P + FS L+ K + + +G+ ++ ++
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 86 SLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNE 145
+LI +C ++ A+ M++ G PS+VT+ SL++G+C V A+ L+ ++V
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 146 GLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEA 205
G +P+VV + ++ C+ G+ A ++ MK+ G P++ T ++ LF +
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238
Query: 206 MSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRG 265
+ M + I D++ ++ ++D + T+N +I G
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLING 298
Query: 266 LCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVD 325
LC GLLDEA+++L + G PN +YN ++G + + K L +M G D
Sbjct: 299 LCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGD 358
Query: 326 ANTTELL 332
T L
Sbjct: 359 TFTYNTL 365
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 96/182 (52%), Gaps = 1/182 (0%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
SKG P V+YN LI G K R +G +L M + GV D T++ L G+ + G S
Sbjct: 317 SKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFS 376
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A V+G MV GV P++ T+N L+ G C ++ +A+ + + + + ++TYN +I
Sbjct: 377 AAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIII 436
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTM-KEHGQ 182
G CK V+ A L + +G+ PDV+T+ ++ G + A EL+ M KE G
Sbjct: 437 KGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGL 496
Query: 183 VP 184
+P
Sbjct: 497 MP 498
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 123/271 (45%), Gaps = 1/271 (0%)
Query: 79 PNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICL 138
P++V ++ L+ ++ E + +F + G + ++ +LI +C+ + A+
Sbjct: 77 PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSC 136
Query: 139 LGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFK 198
LG+M+ G +P +VT+ +LV GFC V + A L + G PN+ I+D L +
Sbjct: 137 LGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 196
Query: 199 CRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYT 258
+ A+ + + M+K I D+V YN ++ + D T
Sbjct: 197 KGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVIT 256
Query: 259 FNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMK 318
F+ +I EG L EA++ M + PN +YN ++GL + ++K L ++
Sbjct: 257 FSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLV 316
Query: 319 CKGFPVDANTTELLICIY-SANKGDNAFQEL 348
KGF +A T LI Y A + D+ + L
Sbjct: 317 SKGFFPNAVTYNTLINGYCKAKRVDDGMKIL 347
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/349 (31%), Positives = 179/349 (51%), Gaps = 2/349 (0%)
Query: 2 KNSKG-IQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
K KG I+ +V YN +I GL K+ + L +M KG+ PDV T++ L+ G
Sbjct: 240 KMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYG 299
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVR-RGCLPSVVTY 119
S A ++ M+ + P++V +N+LI + ++ EA K++D MV+ + C P VV Y
Sbjct: 300 RWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAY 359
Query: 120 NSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKE 179
N+LI G+CK K V+ + + EM GL + VT+T L+ GF Q A+ +F M
Sbjct: 360 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 419
Query: 180 HGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXX 239
G P++ T ++LDGL A+ +F M+K D+ LDIV Y M++ +C
Sbjct: 420 DGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVED 479
Query: 240 XXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVH 299
+ T+ M+ G C +GL +EA+ L + M+E+G PN +YN +
Sbjct: 480 GWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIR 539
Query: 300 GLLRKLDISRSEKYLQIMKCKGFPVDANTTELLICIYSANKGDNAFQEL 348
LR D + S + ++ M+ GF DA+T L+ + + D +F ++
Sbjct: 540 ARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHDGRLDKSFLDM 588
Score = 150 bits (380), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 165/344 (47%), Gaps = 2/344 (0%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCV 68
P+IV ++ L+ + K ++ L +M G+ ++ T+SI ++ F + +S A +
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
+G M+ +G P++VT NSL+ G+C +++ EA+ + D MV G P VT+ +L+HG +
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 129 VKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQT 188
A+ L+ MV +G +PD+VT+ A++ G C+ G+P A L M++ ++
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 252
Query: 189 CTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXX 248
I+DGL K + +A LF ME I D+ YN ++ +C
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 249 XXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRM-EENGCPPNRCSYNVFVHGLLRKLDI 307
D FN +I EG L EAE+L M + C P+ +YN + G + +
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372
Query: 308 SRSEKYLQIMKCKGFPVDANT-TELLICIYSANKGDNAFQELQQ 350
+ + M +G + T T L+ + A DNA +Q
Sbjct: 373 EEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 416
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 150/329 (45%), Gaps = 1/329 (0%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G P+IV+ N L+ G R E L+ +M++ G PD TF+ LV G + S A
Sbjct: 140 GYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEA 199
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ MV G +P++VTY ++I G C R + + A+ + + M + VV YN++I G
Sbjct: 200 VALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDG 259
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
CK K +D A L +M +G+KPDV T+ L+ C G+ A L M E P+
Sbjct: 260 LCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPD 319
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDL-DIVVYNVMLDGMCXXXXXXXXXXXX 244
L ++D K EA L+ M KS D+V YN ++ G C
Sbjct: 320 LVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVF 379
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
+T T+ +I G D A+ + +M +G P+ +YN+ + GL
Sbjct: 380 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNN 439
Query: 305 LDISRSEKYLQIMKCKGFPVDANTTELLI 333
++ + + M+ + +D T +I
Sbjct: 440 GNVETALVVFEYMQKRDMKLDIVTYTTMI 468
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 153/329 (46%), Gaps = 1/329 (0%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
GI + +Y+ I + + +L +MM+ G P + T + L++GF +S A
Sbjct: 105 GISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 164
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ MV +G +P+ VT+ +L+ G ++ EA+ + + MV +GC P +VTY ++I+G
Sbjct: 165 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 224
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
CK + D A+ LL +M ++ DVV + ++ G C+ A +LF M+ G P+
Sbjct: 225 LCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPD 284
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+ T ++ L S+A L M + +I+ D+V +N ++D
Sbjct: 285 VFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYD 344
Query: 246 XXXXXXXXF-DTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
F D +N +I+G C ++E E+ M + G N +Y +HG +
Sbjct: 345 EMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQA 404
Query: 305 LDISRSEKYLQIMKCKGFPVDANTTELLI 333
D ++ + M G D T +L+
Sbjct: 405 RDCDNAQMVFKQMVSDGVHPDIMTYNILL 433
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 122/234 (52%), Gaps = 4/234 (1%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
M SK P +V+YN LI+G K+ R +EG + EM Q+G++ + T++ L+ GF +
Sbjct: 346 MVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQAR 405
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
A+ V MV GV P+++TYN L+ G C +E A+ VF+ M +R +VTY
Sbjct: 406 DCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYT 465
Query: 121 SLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEH 180
++I CK V+ L + +G+KP+VVT+T ++ GFC+ G A LF MKE
Sbjct: 466 TMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKED 525
Query: 181 GQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDI----VVYNVMLDG 230
G +PN T ++ + + + L + M D +V N++ DG
Sbjct: 526 GPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHDG 579
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 137/323 (42%), Gaps = 40/323 (12%)
Query: 68 VMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWC 127
+ G MV P++V ++ L+ ++ + + + + M G ++ TY+ I+ +C
Sbjct: 62 LFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFC 121
Query: 128 KVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQ 187
+ + A+ +LG+M+ G P +VT +L+ GFC + A L M E G P+
Sbjct: 122 RRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTV 181
Query: 188 TCTVILDGLFKCRFHSE-----------------------------------AMSLFRAM 212
T T ++ GLF+ SE A++L M
Sbjct: 182 TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM 241
Query: 213 EKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLL 272
EK I+ D+V+YN ++DG+C D +T+N +I LC G
Sbjct: 242 EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRW 301
Query: 273 DEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEK-YLQIMKCKG-FP--VDANT 328
+A LL M E P+ +N + +++ + +EK Y +++K K FP V NT
Sbjct: 302 SDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNT 361
Query: 329 TELLICIYS-ANKGDNAFQELQQ 350
C Y +G F+E+ Q
Sbjct: 362 LIKGFCKYKRVEEGMEVFREMSQ 384
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 162/323 (50%), Gaps = 1/323 (0%)
Query: 12 VSYNCLIQGLFKFGRWKEGAGLLYEMM-QKGVMPDVQTFSILVDGFGKEGLVSGARCVMG 70
VS N ++ G K GR ++ + EM Q G PD TF+ LV+G K G V A +M
Sbjct: 260 VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMD 319
Query: 71 FMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVK 130
M+ G +P+V TYNS+I G C +++EA++V D M+ R C P+ VTYN+LI CK
Sbjct: 320 VMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKEN 379
Query: 131 DVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCT 190
V+ A L + ++G+ PDV T+ +L+ G C A ELF M+ G P+ T
Sbjct: 380 QVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYN 439
Query: 191 VILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXX 250
+++D L EA+++ + ME S ++ YN ++DG C
Sbjct: 440 MLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVH 499
Query: 251 XXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRS 310
++ T+N +I GLC +++A +L+ +M G P++ +YN + R DI ++
Sbjct: 500 GVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKA 559
Query: 311 EKYLQIMKCKGFPVDANTTELLI 333
+Q M G D T LI
Sbjct: 560 ADIVQAMTSNGCEPDIVTYGTLI 582
Score = 171 bits (432), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 98/321 (30%), Positives = 157/321 (48%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
M N G P ++N L+ GL K G K ++ M+Q+G PDV T++ ++ G K G
Sbjct: 285 MSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLG 344
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
V A V+ M+ PN VTYN+LI C +Q+EEA ++ ++ +G LP V T+N
Sbjct: 345 EVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFN 404
Query: 121 SLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEH 180
SLI G C ++ A+ L EM ++G +PD T+ L+ C GK A + M+
Sbjct: 405 SLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS 464
Query: 181 GQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXX 240
G ++ T ++DG K EA +F ME + + V YN ++DG+C
Sbjct: 465 GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 524
Query: 241 XXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHG 300
D YT+N ++ C G + +A +++ M NGC P+ +Y + G
Sbjct: 525 AQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISG 584
Query: 301 LLRKLDISRSEKYLQIMKCKG 321
L + + + K L+ ++ KG
Sbjct: 585 LCKAGRVEVASKLLRSIQMKG 605
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/323 (30%), Positives = 149/323 (46%), Gaps = 1/323 (0%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G P + +YN +I GL K G KE +L +M+ + P+ T++ L+ KE V
Sbjct: 324 EGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEE 383
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A + + G+ P+V T+NSLI G CL AM++F+ M +GC P TYN LI
Sbjct: 384 ATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLID 443
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
C +D A+ +L +M G V+T+ L+ GFC+ K A+E+F M+ HG
Sbjct: 444 SLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSR 503
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
N T ++DGL K R +A L M D YN +L C
Sbjct: 504 NSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIV 563
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
D T+ +I GLC G ++ A +LL ++ G +YN + GL RK
Sbjct: 564 QAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRK 623
Query: 305 LDISRS-EKYLQIMKCKGFPVDA 326
+ + + ++++ P DA
Sbjct: 624 RKTTEAINLFREMLEQNEAPPDA 646
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 162/329 (49%), Gaps = 1/329 (0%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
GI+P + ++N LI+ L + + + +L +M G++PD +TF+ ++ G+ +EG + GA
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRR-GCLPSVVTYNSLIH 124
+ MV G + V+ N ++ G+C ++E+A+ M + G P T+N+L++
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G CK V AI ++ M+ EG PDV T+ +++ G C++G+ A E+ M P
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
N T ++ L K EA L R + I D+ +N ++ G+C
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
D +T+N++I LC +G LDEA +L +ME +GC + +YN + G +
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483
Query: 305 LDISRSEKYLQIMKCKGFPVDANTTELLI 333
+E+ M+ G ++ T LI
Sbjct: 484 NKTREAEEIFDEMEVHGVSRNSVTYNTLI 512
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 148/302 (49%), Gaps = 2/302 (0%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
SKGI P + ++N LIQGL + L EM KG PD T+++L+D +G +
Sbjct: 392 TSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL 451
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
A ++ M G +V+TYN+LI G+C ++ EA ++FD M G + VTYN+L
Sbjct: 452 DEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTL 511
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
I G CK + V+ A L+ +M+ EG KPD T+ +L+ FC+ G A ++ M +G
Sbjct: 512 IDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGC 571
Query: 183 VPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXX 242
P++ T ++ GL K A L R+++ I+L YN ++ G+
Sbjct: 572 EPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAIN 631
Query: 243 X-XXXXXXXXXXFDTYTFNIMIRGLC-WEGLLDEAEELLMRMEENGCPPNRCSYNVFVHG 300
D ++ I+ RGLC G + EA + L+ + E G P S + G
Sbjct: 632 LFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEG 691
Query: 301 LL 302
LL
Sbjct: 692 LL 693
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 155/349 (44%), Gaps = 5/349 (1%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G++P YN ++ L K +M G+ PDV TF++L+ + + A
Sbjct: 149 GLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPA 208
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ M G+ P+ T+ +++ GY ++ A+++ + MV GC S V+ N ++HG
Sbjct: 209 ILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHG 268
Query: 126 WCKVKDVDRAICLLGEMVNE-GLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
+CK V+ A+ + EM N+ G PD T+ LV G C+ G A E+ M + G P
Sbjct: 269 FCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDP 328
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
++ T ++ GL K EA+ + M D + V YN ++ +C
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELA 388
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
D TFN +I+GLC A EL M GC P+ +YN+ + L K
Sbjct: 389 RVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK 448
Query: 305 LDISRSEKYLQIMKCKGFPVDANTTELLICIY-SANKGDNA---FQELQ 349
+ + L+ M+ G T LI + ANK A F E++
Sbjct: 449 GKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEME 497
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 87/205 (42%), Gaps = 4/205 (1%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G +P +YN L+ + G K+ A ++ M G PD+ T+ L+ G K G V
Sbjct: 534 EGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEV 593
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRG-CLPSVVTYNSLI 123
A ++ + G+ YN +I G + + EA+ +F M+ + P V+Y +
Sbjct: 594 ASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVF 653
Query: 124 HGWCK-VKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
G C + A+ L E++ +G P+ + L G + +L + + +
Sbjct: 654 RGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKAR 713
Query: 183 VPNLQTCTVILDGLFKCRFHSEAMS 207
+ V GL K R +A++
Sbjct: 714 FSEEEVSMV--KGLLKIRKFQDALA 736
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 160/306 (52%), Gaps = 10/306 (3%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEG-AGL----LYEMMQKGVMPDVQTFSILVDG 55
M S GI P + +YN LI +G WKEG GL L++M KG P+V +++ILVDG
Sbjct: 379 MVTSYGIVPDVCTYNSLI-----YGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDG 433
Query: 56 FGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPS 115
F K G + A V+ M G++PN V +N LI +C H++ EA+++F M R+GC P
Sbjct: 434 FCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPD 493
Query: 116 VVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFF 175
V T+NSLI G C+V ++ A+ LL +M++EG+ + VT+ L+ F + G+ A++L
Sbjct: 494 VYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVN 553
Query: 176 TMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXX 235
M G + T ++ GL + +A SLF M + + N++++G+C
Sbjct: 554 EMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSG 613
Query: 236 XXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYN 295
D TFN +I GLC G +++ + +++ G PP+ ++N
Sbjct: 614 MVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFN 673
Query: 296 VFVHGL 301
+ L
Sbjct: 674 TLMSWL 679
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 156/327 (47%), Gaps = 1/327 (0%)
Query: 8 QPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQK-GVMPDVQTFSILVDGFGKEGLVSGAR 66
+P IV +N LI G GR + +L +M+ G++PDV T++ L+ G+ KEGLV A
Sbjct: 350 KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLAL 409
Query: 67 CVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGW 126
V+ M + G +PNV +Y L+ G+C +++EA V + M G P+ V +N LI +
Sbjct: 410 EVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAF 469
Query: 127 CKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNL 186
CK + A+ + EM +G KPDV T+ +L+ G C+V + A L M G V N
Sbjct: 470 CKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANT 529
Query: 187 QTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXX 246
T +++ + EA L M LD + YN ++ G+C
Sbjct: 530 VTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEK 589
Query: 247 XXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLD 306
+ NI+I GLC G+++EA E M G P+ ++N ++GL R
Sbjct: 590 MLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGR 649
Query: 307 ISRSEKYLQIMKCKGFPVDANTTELLI 333
I + ++ +G P D T L+
Sbjct: 650 IEDGLTMFRKLQAEGIPPDTVTFNTLM 676
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 159/330 (48%), Gaps = 5/330 (1%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G P ++Y L+ GL K GR L Y + + P++ F+ L+ GF G +
Sbjct: 316 RGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDD 371
Query: 65 ARCVMGFMV-HVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A+ V+ MV G+ P+V TYNSLI GY + A++V M +GC P+V +Y L+
Sbjct: 372 AKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILV 431
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
G+CK+ +D A +L EM +GLKP+ V + L+ FC+ + A E+F M G
Sbjct: 432 DGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCK 491
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXX 243
P++ T ++ GL + A+ L R M + + V YN +++
Sbjct: 492 PDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKL 551
Query: 244 XXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLR 303
D T+N +I+GLC G +D+A L +M +G P+ S N+ ++GL R
Sbjct: 552 VNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCR 611
Query: 304 KLDISRSEKYLQIMKCKGFPVDANTTELLI 333
+ + ++ + M +G D T LI
Sbjct: 612 SGMVEEAVEFQKEMVLRGSTPDIVTFNSLI 641
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 157/329 (47%), Gaps = 5/329 (1%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G P ++N +I GL KF R E A ++ M+ +G PD T+ L++G K G V A
Sbjct: 282 GCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA 341
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVF-DLMVRRGCLPSVVTYNSLIH 124
+ + + +P +V +N+LI G+ ++++A V D++ G +P V TYNSLI+
Sbjct: 342 KD----LFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIY 397
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G+ K V A+ +L +M N+G KP+V ++T LV GFC++GK A + M G P
Sbjct: 398 GYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKP 457
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
N ++ K EA+ +FR M + D+ +N ++ G+C
Sbjct: 458 NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLL 517
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
+T T+N +I G + EA +L+ M G P + +YN + GL R
Sbjct: 518 RDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRA 577
Query: 305 LDISRSEKYLQIMKCKGFPVDANTTELLI 333
++ ++ + M G + +LI
Sbjct: 578 GEVDKARSLFEKMLRDGHAPSNISCNILI 606
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 156/365 (42%), Gaps = 32/365 (8%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
M+N +PT SYN +++ L K A + Y+M+ + + P + TF +++ F
Sbjct: 172 MRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVN 231
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
+ A ++ M G PN V Y +LI +++ EA+++ + M GC+P T+N
Sbjct: 232 EIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFN 291
Query: 121 SLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKE- 179
+I G CK ++ A ++ M+ G PD +T+ L+ G C++G+ AAK+LF+ + +
Sbjct: 292 DVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKP 351
Query: 180 -------------------------------HGQVPNLQTCTVILDGLFKCRFHSEAMSL 208
+G VP++ T ++ G +K A+ +
Sbjct: 352 EIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEV 411
Query: 209 FRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCW 268
M ++ Y +++DG C +T FN +I C
Sbjct: 412 LHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCK 471
Query: 269 EGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANT 328
E + EA E+ M GC P+ ++N + GL +I + L+ M +G + T
Sbjct: 472 EHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVT 531
Query: 329 TELLI 333
LI
Sbjct: 532 YNTLI 536
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 111/201 (55%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KG +P + ++N LI GL + K LL +M+ +GV+ + T++ L++ F + G +
Sbjct: 488 KGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKE 547
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
AR ++ MV G + +TYNSLI G C ++++A +F+ M+R G PS ++ N LI+
Sbjct: 548 ARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILIN 607
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G C+ V+ A+ EMV G PD+VT+ +L+ G C+ G+ +F ++ G P
Sbjct: 608 GLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPP 667
Query: 185 NLQTCTVILDGLFKCRFHSEA 205
+ T ++ L K F +A
Sbjct: 668 DTVTFNTLMSWLCKGGFVYDA 688
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 108/208 (51%), Gaps = 6/208 (2%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
S+G+ V+YN LI + G KE L+ EM+ +G D T++ L+ G + G V
Sbjct: 522 SEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVD 581
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
AR + M+ G P+ ++ N LI G C +EEA++ MV RG P +VT+NSLI
Sbjct: 582 KARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLI 641
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
+G C+ ++ + + ++ EG+ PD VT+ L+ C+ G A L E G V
Sbjct: 642 NGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFV 701
Query: 184 PNLQTCTVILDGLF------KCRFHSEA 205
PN +T +++L + + RF++ A
Sbjct: 702 PNHRTWSILLQSIIPQETLDRRRFYNAA 729
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/318 (31%), Positives = 159/318 (50%)
Query: 8 QPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARC 67
P+ + + L++GL K G+ +E L+ ++ GV P++ ++ L+D K A
Sbjct: 329 SPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAEL 388
Query: 68 VMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWC 127
+ M +G+ PN VTY+ LI +C R +++ A+ MV G SV YNSLI+G C
Sbjct: 389 LFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHC 448
Query: 128 KVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQ 187
K D+ A + EM+N+ L+P VVT+T+L+GG+C GK A L+ M G P++
Sbjct: 449 KFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIY 508
Query: 188 TCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXX 247
T T +L GLF+ +A+ LF M + ++ + V YNVM++G C
Sbjct: 509 TFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEM 568
Query: 248 XXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDI 307
DTY++ +I GLC G EA+ + + + C N Y +HG R+ +
Sbjct: 569 TEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKL 628
Query: 308 SRSEKYLQIMKCKGFPVD 325
+ Q M +G +D
Sbjct: 629 EEALSVCQEMVQRGVDLD 646
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 156/327 (47%)
Query: 7 IQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGAR 66
++P V+YN +I+G + G + L EM +KG++PD ++ L+ G G S A+
Sbjct: 538 VKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK 597
Query: 67 CVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGW 126
+ + E N + Y L+ G+C ++EEA+ V MV+RG +V Y LI G
Sbjct: 598 VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGS 657
Query: 127 CKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNL 186
K KD LL EM + GLKPD V +T+++ + G A ++ M G VPN
Sbjct: 658 LKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNE 717
Query: 187 QTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXX 246
T T +++GL K F +EA L M+ + V Y LD +
Sbjct: 718 VTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHN 777
Query: 247 XXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLD 306
+T T+N++IRG C +G ++EA EL+ RM +G P+ +Y ++ L R+ D
Sbjct: 778 AILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRND 837
Query: 307 ISRSEKYLQIMKCKGFPVDANTTELLI 333
+ ++ + M KG D LI
Sbjct: 838 VKKAIELWNSMTEKGIRPDRVAYNTLI 864
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 2/321 (0%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQK-GVMPDVQTFSILVDGFGKEGLVSG 64
G+ P + YN LI L K GR A LL++ M K G+ P+ T+SIL+D F + G +
Sbjct: 362 GVSPNLFVYNALIDSLCK-GRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDT 420
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A +G MV G++ +V YNSLI G+C + A M+ + P+VVTY SL+
Sbjct: 421 ALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMG 480
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G+C +++A+ L EM +G+ P + T+T L+ G + G A +LF M E P
Sbjct: 481 GYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKP 540
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
N T V+++G + S+A + M + I D Y ++ G+C
Sbjct: 541 NRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFV 600
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
+ + ++ G C EG L+EA + M + G + Y V + G L+
Sbjct: 601 DGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKH 660
Query: 305 LDISRSEKYLQIMKCKGFPVD 325
D L+ M +G D
Sbjct: 661 KDRKLFFGLLKEMHDRGLKPD 681
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 150/331 (45%), Gaps = 2/331 (0%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
+K ++PT+V+Y L+ G G+ + L +EM KG+ P + TF+ L+ G + GL+
Sbjct: 465 NKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIR 524
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A + M V+PN VTYN +I GYC M +A + M +G +P +Y LI
Sbjct: 525 DAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLI 584
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
HG C A + + + + + +T L+ GFC+ GK A + M + G
Sbjct: 585 HGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVD 644
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXX 243
+L V++DG K + L + M + D V+Y M+D
Sbjct: 645 LDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGI 704
Query: 244 XXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLR 303
+ T+ +I GLC G ++EAE L +M+ PN+ +Y F+ L +
Sbjct: 705 WDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK 764
Query: 304 -KLDISRSEKYLQIMKCKGFPVDANTTELLI 333
++D+ ++ + L KG + T +LI
Sbjct: 765 GEVDMQKAVE-LHNAILKGLLANTATYNMLI 794
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 152/341 (44%), Gaps = 35/341 (10%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G++P V+Y+ LI + G+ L EM+ G+ V ++ L++G K G +S A
Sbjct: 397 GLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAA 456
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
M M++ +EP VVTY SL+GGYC + ++ +A++++ M +G PS+ T+ +L+ G
Sbjct: 457 EGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSG 516
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+ + A+ L EM +KP+ VT+ ++ G+C+ G A E M E G VP+
Sbjct: 517 LFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPD 576
Query: 186 LQT----------------CTVILDGLFK--CRFH-----------------SEAMSLFR 210
+ V +DGL K C + EA+S+ +
Sbjct: 577 TYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQ 636
Query: 211 AMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEG 270
M + +DLD+V Y V++DG D + MI G
Sbjct: 637 EMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTG 696
Query: 271 LLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSE 311
EA + M GC PN +Y ++GL + ++ +E
Sbjct: 697 DFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 737
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 147/331 (44%), Gaps = 1/331 (0%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCV 68
P + + + L+ GL KF + L +M+ G+ PDV ++ ++ + +S A+ +
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
+ M G + N+V YN LI G C + ++ EA+ + + + P VVTY +L++G CK
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Query: 129 VKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQT 188
V++ + + ++ EM+ P ++LV G + GK A L + + G PNL
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFV 369
Query: 189 CTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXX 248
++D L K R EA LF M K + + V Y++++D C
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429
Query: 249 XXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDIS 308
Y +N +I G C G + AE + M P +Y + G K I+
Sbjct: 430 DTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489
Query: 309 RSEKYLQIMKCKGF-PVDANTTELLICIYSA 338
++ + M KG P T LL ++ A
Sbjct: 490 KALRLYHEMTGKGIAPSIYTFTTLLSGLFRA 520
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 152/367 (41%), Gaps = 39/367 (10%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
S GI+P + Y +I+ L + ++ M G ++ +++L+DG K+ V
Sbjct: 220 SVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVW 279
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYC------------------------------- 92
A + + ++P+VVTY +L+ G C
Sbjct: 280 EAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLV 339
Query: 93 ----LRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLK 148
R ++EEA+ + +V G P++ YN+LI CK + A L M GL+
Sbjct: 340 EGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLR 399
Query: 149 PDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFH--SEAM 206
P+ VT++ L+ FC+ GK A M + G ++ +++G C+F S A
Sbjct: 400 PNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLING--HCKFGDISAAE 457
Query: 207 SLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGL 266
M ++ +V Y ++ G C YTF ++ GL
Sbjct: 458 GFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGL 517
Query: 267 CWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDA 326
GL+ +A +L M E PNR +YNV + G + D+S++ ++L+ M KG D
Sbjct: 518 FRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDT 577
Query: 327 NTTELLI 333
+ LI
Sbjct: 578 YSYRPLI 584
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 102/221 (46%), Gaps = 35/221 (15%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
+ +G++P V Y +I K G +KE G+ M+ +G +P+ T++ +++G K G V
Sbjct: 674 HDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFV 733
Query: 63 SGARCVMGFMVHVGVEPNVVTY-----------------------------------NSL 87
+ A + M V PN VTY N L
Sbjct: 734 NEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNML 793
Query: 88 IGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGL 147
I G+C + ++EEA ++ M+ G P +TY ++I+ C+ DV +AI L M +G+
Sbjct: 794 IRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGI 853
Query: 148 KPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQT 188
+PD V + L+ G C G+ A EL M G +PN +T
Sbjct: 854 RPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 116/256 (45%), Gaps = 35/256 (13%)
Query: 12 VSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGF 71
+ Y L+ G + G+ +E + EM+Q+GV D+ + +L+DG K ++
Sbjct: 613 ICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKE 672
Query: 72 MVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKD 131
M G++P+ V Y S+I +EA ++DLM+ GC+P+ VTY ++I+G CK
Sbjct: 673 MHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGF 732
Query: 132 VDRAICLLGEM-----------------------------------VNEGLKPDVVTWTA 156
V+ A L +M + +GL + T+
Sbjct: 733 VNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNM 792
Query: 157 LVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSD 216
L+ GFC+ G+ A EL M G P+ T T +++ L + +A+ L+ +M +
Sbjct: 793 LIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKG 852
Query: 217 IDLDIVVYNVMLDGMC 232
I D V YN ++ G C
Sbjct: 853 IRPDRVAYNTLIHGCC 868
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 115/254 (45%), Gaps = 1/254 (0%)
Query: 84 YNSLIGGYCLRHQMEEAMKVFDLMVRR-GCLPSVVTYNSLIHGWCKVKDVDRAICLLGEM 142
++ LI Y ++ + + VF +M+ + LP V T ++L+HG K + A+ L +M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 143 VNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFH 202
V+ G++PDV +T ++ C++ AKE+ M+ G N+ V++DGL K +
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 203 SEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIM 262
EA+ + + + D+ D+V Y ++ G+C + +
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338
Query: 263 IRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGF 322
+ GL G ++EA L+ R+ + G PN YN + L + +E M G
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGL 398
Query: 323 PVDANTTELLICIY 336
+ T +LI ++
Sbjct: 399 RPNDVTYSILIDMF 412
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 167 bits (424), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 104/331 (31%), Positives = 169/331 (51%), Gaps = 4/331 (1%)
Query: 13 SYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFM 72
+Y LI GLFK G K+G + +M + GV P++ T++ +++ K+G A V M
Sbjct: 235 TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEM 294
Query: 73 VHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDV 132
GV N+VTYN+LIGG C ++ EA KV D M G P+++TYN+LI G+C V +
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKL 354
Query: 133 DRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVI 192
+A+ L ++ + GL P +VT+ LV GFC+ G A ++ M+E G P+ T T++
Sbjct: 355 GKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTIL 414
Query: 193 LDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXX 252
+D + +A+ L +ME+ + D+ Y+V++ G C
Sbjct: 415 IDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNC 474
Query: 253 XFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEK 312
+ +N MI G C EG A +LL MEE PN SY + L ++ +E+
Sbjct: 475 EPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAER 534
Query: 313 YLQIMKCKGFPVDANTTELLICIYSANKGDN 343
++ M G +D +T+ ++ + S K D+
Sbjct: 535 LVEKMIDSG--IDPSTS--ILSLISRAKNDS 561
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 152/285 (53%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+ P + +YNC++ L K GR K+ + EM ++GV ++ T++ L+ G +E ++ A
Sbjct: 263 GVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEA 322
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
V+ M G+ PN++TYN+LI G+C ++ +A+ + + RG PS+VTYN L+ G
Sbjct: 323 NKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSG 382
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+C+ D A ++ EM G+KP VT+T L+ F + A +L +M+E G VP+
Sbjct: 383 FCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPD 442
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+ T +V++ G +EA LF++M + + + + V+YN M+ G C
Sbjct: 443 VHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLK 502
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPN 290
+ ++ MI LC E EAE L+ +M ++G P+
Sbjct: 503 EMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPS 547
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 108/189 (57%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
S+G+ P++V+YN L+ G + G A ++ EM ++G+ P T++IL+D F + +
Sbjct: 366 SRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNME 425
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A + M +G+ P+V TY+ LI G+C++ QM EA ++F MV + C P+ V YN++I
Sbjct: 426 KAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMI 485
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
G+CK RA+ LL EM + L P+V ++ ++ C+ K A+ L M + G
Sbjct: 486 LGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGID 545
Query: 184 PNLQTCTVI 192
P+ ++I
Sbjct: 546 PSTSILSLI 554
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 154/336 (45%), Gaps = 3/336 (0%)
Query: 2 KNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGL 61
+N + + S+ LI+G + G ++ LL E+ + G P+V ++ L+DG K+G
Sbjct: 154 ENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGE 213
Query: 62 VSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNS 121
+ A+ + M +G+ N TY LI G ++ ++++ M G P++ TYN
Sbjct: 214 IEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNC 273
Query: 122 LIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHG 181
+++ CK A + EM G+ ++VT+ L+GG C+ K A ++ MK G
Sbjct: 274 VMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDG 333
Query: 182 QVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXX 241
PNL T ++DG +A+SL R ++ + +V YN+++ G C
Sbjct: 334 INPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAA 393
Query: 242 XXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGL 301
T+ I+I +++A +L + MEE G P+ +Y+V +HG
Sbjct: 394 KMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGF 453
Query: 302 LRKLDISRSEKYLQIM---KCKGFPVDANTTELLIC 334
K ++ + + + M C+ V NT L C
Sbjct: 454 CIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYC 489
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 114/215 (53%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
S GI P +++YN LI G G+ + L ++ +G+ P + T++ILV GF ++G S
Sbjct: 331 SDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTS 390
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
GA ++ M G++P+ VTY LI + ME+A+++ M G +P V TY+ LI
Sbjct: 391 GAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLI 450
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
HG+C ++ A L MV + +P+ V + ++ G+C+ G A +L M+E
Sbjct: 451 HGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELA 510
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDID 218
PN+ + +++ L K R EA L M S ID
Sbjct: 511 PNVASYRYMIEVLCKERKSKEAERLVEKMIDSGID 545
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 119/228 (52%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G+ IV+YN LI GL + + E ++ +M G+ P++ T++ L+DGF G +
Sbjct: 297 RGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGK 356
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A + + G+ P++VTYN L+ G+C + A K+ M RG PS VTY LI
Sbjct: 357 ALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILID 416
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
+ + ++++AI L M GL PDV T++ L+ GFC G+ A LF +M E P
Sbjct: 417 TFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEP 476
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMC 232
N ++ G K A+ L + ME+ ++ ++ Y M++ +C
Sbjct: 477 NEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLC 524
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 159/330 (48%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
+G+ P + +YN IQGL + G ++ ++++G PDV T++ L+ G K
Sbjct: 244 KRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQ 303
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A +G MV+ G+EP+ TYN+LI GYC ++ A ++ V G +P TY SLI
Sbjct: 304 EAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLI 363
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
G C + +RA+ L E + +G+KP+V+ + L+ G G L A +L M E G +
Sbjct: 364 DGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLI 423
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXX 243
P +QT ++++GL K S+A L + M DI +N+++ G
Sbjct: 424 PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEI 483
Query: 244 XXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLR 303
D YT+N ++ GLC ++ E M E GC PN ++N+ + L R
Sbjct: 484 LDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCR 543
Query: 304 KLDISRSEKYLQIMKCKGFPVDANTTELLI 333
+ + L+ MK K DA T LI
Sbjct: 544 YRKLDEALGLLEEMKNKSVNPDAVTFGTLI 573
Score = 158 bits (399), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 101/326 (30%), Positives = 160/326 (49%), Gaps = 1/326 (0%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KGI+P ++ YN LI+GL G E A L EM +KG++P+VQTF+ILV+G K G VS
Sbjct: 385 KGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSD 444
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A ++ M+ G P++ T+N LI GY + +ME A+++ D+M+ G P V TYNSL++
Sbjct: 445 ADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLN 504
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G CK + + MV +G P++ T+ L+ C+ K A L MK P
Sbjct: 505 GLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNP 564
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKS-DIDLDIVVYNVMLDGMCXXXXXXXXXXX 243
+ T ++DG K A +LFR ME++ + YN+++
Sbjct: 565 DAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKL 624
Query: 244 XXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLR 303
D YT+ +M+ G C G ++ + L+ M ENG P+ + ++ L
Sbjct: 625 FQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCV 684
Query: 304 KLDISRSEKYLQIMKCKGFPVDANTT 329
+ + + + M KG +A T
Sbjct: 685 EDRVYEAAGIIHRMVQKGLVPEAVNT 710
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 166/331 (50%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
+S+G + +V+Y ++ G ++ EG L +M+ GV + TF+ L+ K+G V
Sbjct: 173 SSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDV 232
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
++ ++ GV PN+ TYN I G C R +++ A+++ ++ +G P V+TYN+L
Sbjct: 233 KECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNL 292
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
I+G CK A LG+MVNEGL+PD T+ L+ G+C+ G A+ + +G
Sbjct: 293 IYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGF 352
Query: 183 VPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXX 242
VP+ T ++DGL + A++LF I ++++YN ++ G+
Sbjct: 353 VPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQ 412
Query: 243 XXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLL 302
+ TFNI++ GLC G + +A+ L+ M G P+ ++N+ +HG
Sbjct: 413 LANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYS 472
Query: 303 RKLDISRSEKYLQIMKCKGFPVDANTTELLI 333
+L + + + L +M G D T L+
Sbjct: 473 TQLKMENALEILDVMLDNGVDPDVYTYNSLL 503
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 145/288 (50%), Gaps = 1/288 (0%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
+ KG+ P + ++N L+ GL K G + GL+ M+ KG PD+ TF+IL+ G+ + +
Sbjct: 418 SEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKM 477
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
A ++ M+ GV+P+V TYNSL+ G C + E+ M+ + MV +GC P++ T+N L
Sbjct: 478 ENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNIL 537
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
+ C+ + +D A+ LL EM N+ + PD VT+ L+ GFC+ G A LF M+E +
Sbjct: 538 LESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYK 597
Query: 183 VPNLQTCTVILDGLFKCRFH-SEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXX 241
V + I+ F + + + A LF+ M + D Y +M+DG C
Sbjct: 598 VSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGY 657
Query: 242 XXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPP 289
T +I LC E + EA ++ RM + G P
Sbjct: 658 KFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVP 705
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 162/331 (48%), Gaps = 1/331 (0%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
++G++P +YN LI G K G + ++ + + G +PD T+ L+DG EG +
Sbjct: 314 NEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETN 373
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A + + G++PNV+ YN+LI G + + EA ++ + M +G +P V T+N L+
Sbjct: 374 RALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILV 433
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
+G CK+ V A L+ M+++G PD+ T+ L+ G+ K A E+ M ++G
Sbjct: 434 NGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVD 493
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXX 243
P++ T +L+GL K + M ++ M + ++ +N++L+ +C
Sbjct: 494 PDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGL 553
Query: 244 XXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEEN-GCPPNRCSYNVFVHGLL 302
D TF +I G C G LD A L +MEE + +YN+ +H
Sbjct: 554 LEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFT 613
Query: 303 RKLDISRSEKYLQIMKCKGFPVDANTTELLI 333
KL+++ +EK Q M + D T L++
Sbjct: 614 EKLNVTMAEKLFQEMVDRCLGPDGYTYRLMV 644
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 168/377 (44%), Gaps = 36/377 (9%)
Query: 8 QPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARC 67
+PT+ SYN ++ L G + + + M +G+ PDV +F+I + F K A
Sbjct: 108 EPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALR 167
Query: 68 VMGFMVHVGVEPNVVTYNSLIGGY-----------------------------------C 92
++ M G E NVV Y +++GG+ C
Sbjct: 168 LLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLC 227
Query: 93 LRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVV 152
+ ++E K+ D +++RG LP++ TYN I G C+ ++D A+ ++G ++ +G KPDV+
Sbjct: 228 KKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVI 287
Query: 153 TWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAM 212
T+ L+ G C+ K A+ M G P+ T ++ G K A +
Sbjct: 288 TYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDA 347
Query: 213 EKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLL 272
+ D Y ++DG+C + +N +I+GL +G++
Sbjct: 348 VFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMI 407
Query: 273 DEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELL 332
EA +L M E G P ++N+ V+GL + +S ++ +++M KG+ D T +L
Sbjct: 408 LEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNIL 467
Query: 333 ICIYSAN-KGDNAFQEL 348
I YS K +NA + L
Sbjct: 468 IHGYSTQLKMENALEIL 484
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 139/334 (41%), Gaps = 1/334 (0%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQK-GVMPDVQTFSILVDGFGKE 59
M+ G + T+ +Y +I+ L +G+++ +L +M + G + + +G++
Sbjct: 30 MRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRK 89
Query: 60 GLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTY 119
G V A V M EP V +YN+++ ++A KV+ M RG P V ++
Sbjct: 90 GKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSF 149
Query: 120 NSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKE 179
+ +CK A+ LL M ++G + +VV + +VGGF + ELF M
Sbjct: 150 TIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLA 209
Query: 180 HGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXX 239
G L T +L L K E L + K + ++ YN+ + G+C
Sbjct: 210 SGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDG 269
Query: 240 XXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVH 299
D T+N +I GLC EAE L +M G P+ +YN +
Sbjct: 270 AVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIA 329
Query: 300 GLLRKLDISRSEKYLQIMKCKGFPVDANTTELLI 333
G + + +E+ + GF D T LI
Sbjct: 330 GYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLI 363
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 145/297 (48%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G P +V+YN L+ G+ K GR E L +M G P+V T +I++ G
Sbjct: 268 RGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMD 327
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A ++ M+ G P+VVT+N LI C + + A+ + + M + GC P+ ++YN L+H
Sbjct: 328 AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLH 387
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G+CK K +DRAI L MV+ G PD+VT+ ++ C+ GK A E+ + G P
Sbjct: 388 GFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSP 447
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
L T ++DGL K +A+ L M D+ D + Y+ ++ G+
Sbjct: 448 VLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFF 507
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGL 301
+ TFN ++ GLC D A + L+ M GC PN SY + + GL
Sbjct: 508 HEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGL 564
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 167/346 (48%), Gaps = 39/346 (11%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G P I+ LI+G + G+ ++ A +L + G +PDV T+++++ G+ K G ++ A
Sbjct: 132 GNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNA 191
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
V+ M V P+VVTYN+++ C ++++AM+V D M++R C P V+TY LI
Sbjct: 192 LSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEA 248
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
C+ V A+ LL EM + G PDVVT+ LV G C+ G+ A + M G PN
Sbjct: 249 TCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPN 308
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+ T +IL + +A L M + +V +N
Sbjct: 309 VITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN-------------------- 348
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
I+I LC +GLL A ++L +M ++GC PN SYN +HG ++
Sbjct: 349 ---------------ILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEK 393
Query: 306 DISRSEKYLQIMKCKG-FPVDANTTELLICIYSANKGDNAFQELQQ 350
+ R+ +YL+ M +G +P +L + K ++A + L Q
Sbjct: 394 KMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 148/276 (53%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
S G QP ++++N +++ + GRW + LL +M++KG P V TF+IL++ ++GL+
Sbjct: 302 SSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLG 361
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A ++ M G +PN ++YN L+ G+C +M+ A++ + MV RGC P +VTYN+++
Sbjct: 362 RAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTML 421
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
CK V+ A+ +L ++ ++G P ++T+ ++ G + GK A +L M+
Sbjct: 422 TALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLK 481
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXX 243
P+ T + ++ GL + EA+ F E+ I + V +N ++ G+C
Sbjct: 482 PDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDF 541
Query: 244 XXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELL 279
+ ++ I+I GL +EG+ EA ELL
Sbjct: 542 LVFMINRGCKPNETSYTILIEGLAYEGMAKEALELL 577
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 149/322 (46%)
Query: 7 IQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGAR 66
+ P +V+YN +++ L G+ K+ +L M+Q+ PDV T++IL++ ++ V A
Sbjct: 200 VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAM 259
Query: 67 CVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGW 126
++ M G P+VVTYN L+ G C +++EA+K + M GC P+V+T+N ++
Sbjct: 260 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSM 319
Query: 127 CKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNL 186
C A LL +M+ +G P VVT+ L+ C+ G A ++ M +HG PN
Sbjct: 320 CSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNS 379
Query: 187 QTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXX 246
+ +L G K + A+ M DIV YN ML +C
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
Query: 247 XXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLD 306
T+N +I GL G +A +LL M P+ +Y+ V GL R+
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499
Query: 307 ISRSEKYLQIMKCKGFPVDANT 328
+ + K+ + G +A T
Sbjct: 500 VDEAIKFFHEFERMGIRPNAVT 521
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
+SKG P +++YN +I GL K G+ + LL EM K + PD T+S LV G +EG V
Sbjct: 441 SSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKV 500
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
A +G+ PN VT+NS++ G C Q + A+ M+ RGC P+ +Y L
Sbjct: 501 DEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTIL 560
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGL 147
I G A+ LL E+ N+GL
Sbjct: 561 IEGLAYEGMAKEALELLNELCNKGL 585
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 160/300 (53%), Gaps = 1/300 (0%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G++P +VSY+ L+ K G ++ +M + G++P+ T++ L+D K G +S A
Sbjct: 362 GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDA 421
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ M+ VGVE NVVTY +LI G C +M+EA ++F M G +P++ +YN+LIHG
Sbjct: 422 FRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHG 481
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+ K K++DRA+ LL E+ G+KPD++ + + G C + K AAK + MKE G N
Sbjct: 482 FVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKAN 541
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
T ++D FK +E + L M++ DI++ +V + V++DG+C
Sbjct: 542 SLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFN 601
Query: 246 XXXXXX-XXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
+ F MI GLC + ++ A L +M + G P+R +Y + G ++
Sbjct: 602 RISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQ 661
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 145/317 (45%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCV 68
P ++ L L G +E +M + V P ++ + L+ F K G +
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
M+ G P V TYN +I C +E A +F+ M RG +P VTYNS+I G+ K
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 129 VKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQT 188
V +D +C EM + +PDV+T+ AL+ FC+ GK E + MK +G PN+ +
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 189 CTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXX 248
+ ++D K +A+ + M + + + Y ++D C
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429
Query: 249 XXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDIS 308
++ T+ +I GLC + EAEEL +M+ G PN SYN +HG ++ ++
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489
Query: 309 RSEKYLQIMKCKGFPVD 325
R+ + L +K +G D
Sbjct: 490 RALELLNELKGRGIKPD 506
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 156/359 (43%), Gaps = 36/359 (10%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G +PT+ +YN +I + K G + GL EM +G++PD T++ ++DGFGK G +
Sbjct: 257 GARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDT 316
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIG-----------------------------------G 90
C M + EP+V+TYN+LI
Sbjct: 317 VCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDA 376
Query: 91 YCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPD 150
+C M++A+K + M R G +P+ TY SLI CK+ ++ A L EM+ G++ +
Sbjct: 377 FCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWN 436
Query: 151 VVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFR 210
VVT+TAL+ G C + A+ELF M G +PNL + ++ G K + A+ L
Sbjct: 437 VVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLN 496
Query: 211 AMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEG 270
++ I D+++Y + G+C ++ + ++ G
Sbjct: 497 ELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSG 556
Query: 271 LLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTT 329
E LL M+E ++ V + GL + +S++ Y + F + AN
Sbjct: 557 NPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRIS-NDFGLQANAA 614
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 112/230 (48%), Gaps = 1/230 (0%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
++ G+ P + SYN LI G K LL E+ +G+ PD+ + + G +
Sbjct: 464 DTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKI 523
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
A+ VM M G++ N + Y +L+ Y E + + D M +VVT+ L
Sbjct: 524 EAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVL 583
Query: 123 IHGWCKVKDVDRAICLLGEMVNE-GLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHG 181
I G CK K V +A+ + N+ GL+ + +TA++ G C+ + AA LF M + G
Sbjct: 584 IDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKG 643
Query: 182 QVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGM 231
VP+ T ++DG FK EA++L M + + LD++ Y ++ G+
Sbjct: 644 LVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGL 693
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 1/204 (0%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
GI+ + Y L+ FK G EG LL EM + + V TF +L+DG K LVS A
Sbjct: 537 GIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKA 596
Query: 66 RCVMGFMVH-VGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
+ + G++ N + ++I G C +Q+E A +F+ MV++G +P Y SL+
Sbjct: 597 VDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMD 656
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G K +V A+ L +M G+K D++ +T+LV G + A+ M G P
Sbjct: 657 GNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHP 716
Query: 185 NLQTCTVILDGLFKCRFHSEAMSL 208
+ C +L ++ EA+ L
Sbjct: 717 DEVLCISVLKKHYELGCIDEAVEL 740
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 102/220 (46%), Gaps = 1/220 (0%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+GI+P ++ Y I GL + + ++ EM + G+ + ++ L+D + K G +
Sbjct: 501 RGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTE 560
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRR-GCLPSVVTYNSLI 123
++ M + +E VVT+ LI G C + +A+ F+ + G + + ++I
Sbjct: 561 GLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMI 620
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
G CK V+ A L +MV +GL PD +T+L+ G + G L A L M E G
Sbjct: 621 DGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMK 680
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVV 223
+L T ++ GL C +A S M I D V+
Sbjct: 681 LDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVL 720
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 74/147 (50%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
+ N G+Q + +I GL K + + L +M+QKG++PD ++ L+DG K+G
Sbjct: 603 ISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQG 662
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
V A + M +G++ +++ Y SL+ G +Q+++A + M+ G P V
Sbjct: 663 NVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCI 722
Query: 121 SLIHGWCKVKDVDRAICLLGEMVNEGL 147
S++ ++ +D A+ L ++ L
Sbjct: 723 SVLKKHYELGCIDEAVELQSYLMKHQL 749
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 158/310 (50%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KG++P ++SYN +I GL + GR KE + +L EM ++G D T++ L+ G+ KEG
Sbjct: 269 KGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQ 328
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A + M+ G+ P+V+TY SLI C M AM+ D M RG P+ TY +L+
Sbjct: 329 ALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVD 388
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G+ + ++ A +L EM + G P VVT+ AL+ G C GK A + MKE G P
Sbjct: 389 GFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSP 448
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
++ + + +L G + EA+ + R M + I D + Y+ ++ G C
Sbjct: 449 DVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLY 508
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
D +T+ +I C EG L++A +L M E G P+ +Y+V ++GL ++
Sbjct: 509 EEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQ 568
Query: 305 LDISRSEKYL 314
+++ L
Sbjct: 569 SRTREAKRLL 578
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 155/330 (46%)
Query: 7 IQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGAR 66
+ P + +YN LI+G G L +M KG +P+V T++ L+DG+ K +
Sbjct: 201 VSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGF 260
Query: 67 CVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGW 126
++ M G+EPN+++YN +I G C +M+E V M RRG VTYN+LI G+
Sbjct: 261 KLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGY 320
Query: 127 CKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNL 186
CK + +A+ + EM+ GL P V+T+T+L+ C+ G A E M+ G PN
Sbjct: 321 CKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNE 380
Query: 187 QTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXX 246
+T T ++DG + + +EA + R M + +V YN +++G C
Sbjct: 381 RTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLED 440
Query: 247 XXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLD 306
D +++ ++ G C +DEA + M E G P+ +Y+ + G +
Sbjct: 441 MKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRR 500
Query: 307 ISRSEKYLQIMKCKGFPVDANTTELLICIY 336
+ + M G P D T LI Y
Sbjct: 501 TKEACDLYEEMLRVGLPPDEFTYTALINAY 530
Score = 160 bits (406), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 164/330 (49%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
+KG P +V+YN LI G K + +G LL M KG+ P++ +++++++G +EG +
Sbjct: 233 TKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMK 292
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
V+ M G + VTYN+LI GYC +A+ + M+R G PSV+TY SLI
Sbjct: 293 EVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLI 352
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
H CK +++RA+ L +M GL P+ T+T LV GF Q G A + M ++G
Sbjct: 353 HSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFS 412
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXX 243
P++ T +++G +A+++ M++ + D+V Y+ +L G C
Sbjct: 413 PSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRV 472
Query: 244 XXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLR 303
DT T++ +I+G C + EA +L M G PP+ +Y ++
Sbjct: 473 KREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCM 532
Query: 304 KLDISRSEKYLQIMKCKGFPVDANTTELLI 333
+ D+ ++ + M KG D T +LI
Sbjct: 533 EGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562
Score = 144 bits (363), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 158/331 (47%), Gaps = 50/331 (15%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+ P++++Y LI + K G L +M +G+ P+ +T++ LVDGF ++G ++ A
Sbjct: 340 GLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA 399
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
V+ M G P+VVTYN+LI G+C+ +ME+A+ V + M +G P VV+Y++++ G
Sbjct: 400 YRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG 459
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELF----------- 174
+C+ DVD A+ + EMV +G+KPD +T+++L+ GFC+ + A +L+
Sbjct: 460 FCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPD 519
Query: 175 -FT-----------------------MKEHGQVPNLQTCTVILDGLFKCRFHSEAMSL-- 208
FT M E G +P++ T +V+++GL K EA L
Sbjct: 520 EFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLL 579
Query: 209 ---FRAMEKSDIDLDIVVYN----------VMLDGMCXXXXXXXXXXXXXXXXXXXXXFD 255
+ SD+ ++ N ++ G C D
Sbjct: 580 KLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPD 639
Query: 256 TYTFNIMIRGLCWEGLLDEAEELLMRMEENG 286
+NIMI G C G + +A L M ++G
Sbjct: 640 GTAYNIMIHGHCRAGDIRKAYTLYKEMVKSG 670
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 144/295 (48%), Gaps = 15/295 (5%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
N G P++V+YN LI G G+ ++ +L +M +KG+ PDV ++S ++ GF + V
Sbjct: 407 NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDV 466
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
A V MV G++P+ +TY+SLI G+C + + +EA +++ M+R G P TY +L
Sbjct: 467 DEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTAL 526
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
I+ +C D+++A+ L EMV +G+ PDVVT++ L+ G + + AK L +
Sbjct: 527 INAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEES 586
Query: 183 VPNLQTCTVILDGLFKCRFHS---------------EAMSLFRAMEKSDIDLDIVVYNVM 227
VP+ T +++ F S EA +F +M + D YN+M
Sbjct: 587 VPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIM 646
Query: 228 LDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRM 282
+ G C T T +++ L EG ++E +++ +
Sbjct: 647 IHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHV 701
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 147/313 (46%), Gaps = 1/313 (0%)
Query: 14 YNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGL-VSGARCVMGFM 72
++ +++ + + +++ G MP V +++ ++D + +S A V M
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 73 VHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDV 132
+ V PNV TYN LI G+C ++ A+ +FD M +GCLP+VVTYN+LI G+CK++ +
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 133 DRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVI 192
D LL M +GL+P+++++ ++ G C+ G+ + M G + T +
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 193 LDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXX 252
+ G K +A+ + M + + ++ Y ++ MC
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Query: 253 XFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEK 312
+ T+ ++ G +G ++EA +L M +NG P+ +YN ++G + +
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIA 436
Query: 313 YLQIMKCKGFPVD 325
L+ MK KG D
Sbjct: 437 VLEDMKEKGLSPD 449
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 136/309 (44%), Gaps = 4/309 (1%)
Query: 29 EGAGLLYEMMQKGV---MPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYN 85
E A L+++ +Q+ F ++V + + L+ A ++ G P V++YN
Sbjct: 114 EYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYN 173
Query: 86 SLIGGYCL-RHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVN 144
+++ + + A VF M+ P+V TYN LI G+C ++D A+ L +M
Sbjct: 174 AVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMET 233
Query: 145 EGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSE 204
+G P+VVT+ L+ G+C++ K +L +M G PNL + V+++GL + E
Sbjct: 234 KGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKE 293
Query: 205 AMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIR 264
+ M + LD V YN ++ G C T+ +I
Sbjct: 294 VSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIH 353
Query: 265 GLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPV 324
+C G ++ A E L +M G PN +Y V G +K ++ + + L+ M GF
Sbjct: 354 SMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSP 413
Query: 325 DANTTELLI 333
T LI
Sbjct: 414 SVVTYNALI 422
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 129/273 (47%), Gaps = 5/273 (1%)
Query: 84 YNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVK-DVDRAICLLGEM 142
++ ++ Y +++A+ + L G +P V++YN+++ + K ++ A + EM
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 143 VNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFH 202
+ + P+V T+ L+ GFC G A LF M+ G +PN+ T ++DG K R
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 203 SEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIM 262
+ L R+M ++ +++ YNV+++G+C D T+N +
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 263 IRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGF 322
I+G C EG +A + M +G P+ +Y +H + + +++R+ ++L M+ +G
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Query: 323 PVDANTTELLICIYSA----NKGDNAFQELQQN 351
+ T L+ +S N+ +E+ N
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDN 409
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 159/329 (48%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G++P+IV+Y+ LI G K G + G L +M++ G PDV + +LVDG K+GL+
Sbjct: 420 RGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLH 479
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A M+ + NVV +NSLI G+C ++ +EA+KVF LM G P V T+ +++
Sbjct: 480 AMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR 539
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
++ A+ L M GL+PD + + L+ FC+ KP +LF M+ +
Sbjct: 540 VSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISA 599
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
++ C V++ LFKC +A F + + ++ DIV YN M+ G C
Sbjct: 600 DIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIF 659
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
+T T I+I LC +D A + M E G PN +Y + +
Sbjct: 660 ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKS 719
Query: 305 LDISRSEKYLQIMKCKGFPVDANTTELLI 333
+DI S K + M+ KG + ++I
Sbjct: 720 VDIEGSFKLFEEMQEKGISPSIVSYSIII 748
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 153/328 (46%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G P +V++ LI G K G L M Q+G+ PD+ +S L+DG+ K G++
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMG 340
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ +H GV+ +VV ++S I Y + A V+ M+ +G P+VVTY LI G
Sbjct: 341 HKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKG 400
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
C+ + A + G+++ G++P +VT+++L+ GFC+ G + L+ M + G P+
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPD 460
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+ V++DGL K AM M I L++VV+N ++DG C
Sbjct: 461 VVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFR 520
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
D TF ++R EG L+EA L RM + G P+ +Y + + +
Sbjct: 521 LMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHM 580
Query: 306 DISRSEKYLQIMKCKGFPVDANTTELLI 333
+ + +M+ D ++I
Sbjct: 581 KPTIGLQLFDLMQRNKISADIAVCNVVI 608
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 171/377 (45%), Gaps = 43/377 (11%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+GI+P +++Y+ LI G FK G G L + + KGV DV FS +D + K G ++
Sbjct: 315 RGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLAT 374
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A V M+ G+ PNVVTY LI G C ++ EA ++ +++RG PS+VTY+SLI
Sbjct: 375 ASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLID 434
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTW------------------------------ 154
G+CK ++ L +M+ G PDVV +
Sbjct: 435 GFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRL 494
Query: 155 -----TALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILD-GLFKCRFHSEAMSL 208
+L+ G+C++ + A ++F M +G P++ T T ++ + + R EA+ L
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLE-EALFL 553
Query: 209 FRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCW 268
F M K ++ D + Y ++D C D N++I L
Sbjct: 554 FFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFK 613
Query: 269 EGLLDEAEELLMRMEENGCPPNRCSYNVFVHGL--LRKLDISRSEKYLQIMKCKGFPVDA 326
+++A + + E P+ +YN + G LR+LD +E+ +++K P
Sbjct: 614 CHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLD--EAERIFELLKVT--PFGP 669
Query: 327 NTTELLICIYSANKGDN 343
NT L I I+ K ++
Sbjct: 670 NTVTLTILIHVLCKNND 686
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 139/291 (47%), Gaps = 1/291 (0%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G + IVS N +++GL + + + LL ++ G P+V TF L++GF K G +
Sbjct: 246 RGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDR 304
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A + M G+EP+++ Y++LI GY + K+F + +G VV ++S I
Sbjct: 305 AFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTID 364
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
+ K D+ A + M+ +G+ P+VVT+T L+ G CQ G+ A ++ + + G P
Sbjct: 365 VYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEP 424
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
++ T + ++DG KC +L+ M K D+V+Y V++DG+
Sbjct: 425 SIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFS 484
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYN 295
+ FN +I G C DEA ++ M G P+ ++
Sbjct: 485 VKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFT 535
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 133/321 (41%), Gaps = 35/321 (10%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+ I+ +V +N LI G + R+ E + M G+ PDV TF+ ++ EG +
Sbjct: 490 QSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEE 549
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLR------------------------------ 94
A + M +G+EP+ + Y +LI +C
Sbjct: 550 ALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIH 609
Query: 95 -----HQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKP 149
H++E+A K F+ ++ P +VTYN++I G+C ++ +D A + + P
Sbjct: 610 LLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGP 669
Query: 150 DVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLF 209
+ VT T L+ C+ A +F M E G PN T ++D K + LF
Sbjct: 670 NTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLF 729
Query: 210 RAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWE 269
M++ I IV Y++++DG+C D + I+IRG C
Sbjct: 730 EEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKV 789
Query: 270 GLLDEAEELLMRMEENGCPPN 290
G L EA L M NG P+
Sbjct: 790 GRLVEAALLYEHMLRNGVKPD 810
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 73/149 (48%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCV 68
P V+ LI L K + M +KG P+ T+ L+D F K + G+ +
Sbjct: 669 PNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKL 728
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
M G+ P++V+Y+ +I G C R +++EA +F + LP VV Y LI G+CK
Sbjct: 729 FEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCK 788
Query: 129 VKDVDRAICLLGEMVNEGLKPDVVTWTAL 157
V + A L M+ G+KPD + AL
Sbjct: 789 VGRLVEAALLYEHMLRNGVKPDDLLQRAL 817
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 156/329 (47%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KG++P Y +I L + + E EM+++G++PD ++ L+DGF K G +
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 369
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A M + P+V+TY ++I G+C M EA K+F M +G P VT+ LI+
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G+CK + A + M+ G P+VVT+T L+ G C+ G +A EL M + G P
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
N+ T I++GL K EA+ L E + ++ D V Y ++D C
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
TFN+++ G C G+L++ E+LL M G PN ++N V +
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 609
Query: 305 LDISRSEKYLQIMKCKGFPVDANTTELLI 333
++ + + M +G D T E L+
Sbjct: 610 NNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 157/329 (47%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+GI P V Y LI G K G + + YEM + + PDV T++ ++ GF + G +
Sbjct: 345 QGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVE 404
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A + M G+EP+ VT+ LI GYC M++A +V + M++ GC P+VVTY +LI
Sbjct: 405 AGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID 464
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G CK D+D A LL EM GL+P++ T+ ++V G C+ G A +L + G
Sbjct: 465 GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA 524
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
+ T T ++D K +A + + M + IV +NV+++G C
Sbjct: 525 DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 584
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
+ TFN +++ C L A + M G P+ +Y V G +
Sbjct: 585 NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKA 644
Query: 305 LDISRSEKYLQIMKCKGFPVDANTTELLI 333
++ + Q MK KGF V +T +LI
Sbjct: 645 RNMKEAWFLFQEMKGKGFSVSVSTYSVLI 673
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 167/366 (45%), Gaps = 35/366 (9%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+ + SYN +I + + GR KE LL M KG PDV ++S +V+G+ + G +
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ M G++PN Y S+IG C ++ EA + F M+R+G LP V Y +LI G
Sbjct: 301 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 360
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELF----------- 174
+CK D+ A EM + + PDV+T+TA++ GFCQ+G + A +LF
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 420
Query: 175 ---FT---------------------MKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFR 210
FT M + G PN+ T T ++DGL K A L
Sbjct: 421 SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLH 480
Query: 211 AMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEG 270
M K + +I YN +++G+C DT T+ ++ C G
Sbjct: 481 EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 540
Query: 271 LLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTE 330
+D+A+E+L M G P ++NV ++G + EK L M KG +A T
Sbjct: 541 EMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFN 600
Query: 331 LLICIY 336
L+ Y
Sbjct: 601 SLVKQY 606
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 151/323 (46%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
+S+ I P +++Y +I G + G E L +EM KG+ PD TF+ L++G+ K G +
Sbjct: 378 HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHM 437
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
A V M+ G PNVVTY +LI G C ++ A ++ M + G P++ TYNS+
Sbjct: 438 KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 497
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
++G CK +++ A+ L+GE GL D VT+T L+ +C+ G+ A+E+ M G
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Query: 183 VPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXX 242
P + T V+++G + L M I + +N ++ C
Sbjct: 558 QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATA 617
Query: 243 XXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLL 302
D T+ +++G C + EA L M+ G + +Y+V + G L
Sbjct: 618 IYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFL 677
Query: 303 RKLDISRSEKYLQIMKCKGFPVD 325
++ + + M+ +G D
Sbjct: 678 KRKKFLEAREVFDQMRREGLAAD 700
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 150/313 (47%)
Query: 36 EMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRH 95
E + GV +V +++I++ + G + A ++ M G P+V++Y++++ GYC
Sbjct: 236 EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFG 295
Query: 96 QMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWT 155
++++ K+ ++M R+G P+ Y S+I C++ + A EM+ +G+ PD V +T
Sbjct: 296 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYT 355
Query: 156 ALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKS 215
L+ GFC+ G AA + F+ M P++ T T I+ G + EA LF M
Sbjct: 356 TLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK 415
Query: 216 DIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEA 275
++ D V + +++G C + T+ +I GLC EG LD A
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 276 EELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLICI 335
ELL M + G PN +YN V+GL + +I + K + + G D T L+
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 535
Query: 336 YSANKGDNAFQEL 348
Y + + QE+
Sbjct: 536 YCKSGEMDKAQEI 548
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 119/224 (53%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+QP I +YN ++ GL K G +E L+ E G+ D T++ L+D + K G + A
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ ++ M+ G++P +VT+N L+ G+CL +E+ K+ + M+ +G P+ T+NSL+
Sbjct: 546 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQ 605
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+C ++ A + +M + G+ PD T+ LV G C+ A LF MK G +
Sbjct: 606 YCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVS 665
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLD 229
+ T +V++ G K + EA +F M + + D +++ D
Sbjct: 666 VSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSD 709
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 103/195 (52%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
+ G+ V+Y L+ K G + +L EM+ KG+ P + TF++L++GF G++
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
++ +M+ G+ PN T+NSL+ YC+R+ ++ A ++ M RG P TY +L+
Sbjct: 579 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
G CK +++ A L EM +G V T++ L+ GF + K L A+E+F M+ G
Sbjct: 639 KGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLA 698
Query: 184 PNLQTCTVILDGLFK 198
+ + D +K
Sbjct: 699 ADKEIFDFFSDTKYK 713
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 131/325 (40%), Gaps = 46/325 (14%)
Query: 33 LLYEMMQKGVMPDVQT--FSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVT---YNSL 87
L+Y G P V F +LVD GL+ AR V M++ G+ +V + Y +
Sbjct: 164 LVYTYKDWGSDPRVFDVFFQVLVDF----GLLREARRVFEKMLNYGLVLSVDSCNVYLTR 219
Query: 88 IGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGL 147
+ C ++ A+ VF G +V +YN +IH C++ + A LL M +G
Sbjct: 220 LSKDC--YKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGY 277
Query: 148 KPDVVTWTALVGGFCQVG-----------------KPLA------------------AKE 172
PDV++++ +V G+C+ G KP + A+E
Sbjct: 278 TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 173 LFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMC 232
F M G +P+ T ++DG K A F M DI D++ Y ++ G C
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 233 XXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRC 292
D+ TF +I G C G + +A + M + GC PN
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 293 SYNVFVHGLLRKLDISRSEKYLQIM 317
+Y + GL ++ D+ + + L M
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEM 482
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 156/329 (47%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KG++P Y +I L + + E EM+++G++PD ++ L+DGF K G +
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 369
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A M + P+V+TY ++I G+C M EA K+F M +G P VT+ LI+
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G+CK + A + M+ G P+VVT+T L+ G C+ G +A EL M + G P
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
N+ T I++GL K EA+ L E + ++ D V Y ++D C
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
TFN+++ G C G+L++ E+LL M G PN ++N V +
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 609
Query: 305 LDISRSEKYLQIMKCKGFPVDANTTELLI 333
++ + + M +G D T E L+
Sbjct: 610 NNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 157/329 (47%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+GI P V Y LI G K G + + YEM + + PDV T++ ++ GF + G +
Sbjct: 345 QGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVE 404
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A + M G+EP+ VT+ LI GYC M++A +V + M++ GC P+VVTY +LI
Sbjct: 405 AGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID 464
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G CK D+D A LL EM GL+P++ T+ ++V G C+ G A +L + G
Sbjct: 465 GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA 524
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
+ T T ++D K +A + + M + IV +NV+++G C
Sbjct: 525 DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 584
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
+ TFN +++ C L A + M G P+ +Y V G +
Sbjct: 585 NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKA 644
Query: 305 LDISRSEKYLQIMKCKGFPVDANTTELLI 333
++ + Q MK KGF V +T +LI
Sbjct: 645 RNMKEAWFLFQEMKGKGFSVSVSTYSVLI 673
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 167/366 (45%), Gaps = 35/366 (9%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+ + SYN +I + + GR KE LL M KG PDV ++S +V+G+ + G +
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ M G++PN Y S+IG C ++ EA + F M+R+G LP V Y +LI G
Sbjct: 301 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 360
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELF----------- 174
+CK D+ A EM + + PDV+T+TA++ GFCQ+G + A +LF
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 420
Query: 175 ---FT---------------------MKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFR 210
FT M + G PN+ T T ++DGL K A L
Sbjct: 421 SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLH 480
Query: 211 AMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEG 270
M K + +I YN +++G+C DT T+ ++ C G
Sbjct: 481 EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 540
Query: 271 LLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTE 330
+D+A+E+L M G P ++NV ++G + EK L M KG +A T
Sbjct: 541 EMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFN 600
Query: 331 LLICIY 336
L+ Y
Sbjct: 601 SLVKQY 606
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 151/323 (46%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
+S+ I P +++Y +I G + G E L +EM KG+ PD TF+ L++G+ K G +
Sbjct: 378 HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHM 437
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
A V M+ G PNVVTY +LI G C ++ A ++ M + G P++ TYNS+
Sbjct: 438 KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 497
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
++G CK +++ A+ L+GE GL D VT+T L+ +C+ G+ A+E+ M G
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Query: 183 VPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXX 242
P + T V+++G + L M I + +N ++ C
Sbjct: 558 QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATA 617
Query: 243 XXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLL 302
D T+ +++G C + EA L M+ G + +Y+V + G L
Sbjct: 618 IYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFL 677
Query: 303 RKLDISRSEKYLQIMKCKGFPVD 325
++ + + M+ +G D
Sbjct: 678 KRKKFLEAREVFDQMRREGLAAD 700
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 150/313 (47%)
Query: 36 EMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRH 95
E + GV +V +++I++ + G + A ++ M G P+V++Y++++ GYC
Sbjct: 236 EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFG 295
Query: 96 QMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWT 155
++++ K+ ++M R+G P+ Y S+I C++ + A EM+ +G+ PD V +T
Sbjct: 296 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYT 355
Query: 156 ALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKS 215
L+ GFC+ G AA + F+ M P++ T T I+ G + EA LF M
Sbjct: 356 TLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK 415
Query: 216 DIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEA 275
++ D V + +++G C + T+ +I GLC EG LD A
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 276 EELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLICI 335
ELL M + G PN +YN V+GL + +I + K + + G D T L+
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 535
Query: 336 YSANKGDNAFQEL 348
Y + + QE+
Sbjct: 536 YCKSGEMDKAQEI 548
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 119/224 (53%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+QP I +YN ++ GL K G +E L+ E G+ D T++ L+D + K G + A
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ ++ M+ G++P +VT+N L+ G+CL +E+ K+ + M+ +G P+ T+NSL+
Sbjct: 546 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQ 605
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+C ++ A + +M + G+ PD T+ LV G C+ A LF MK G +
Sbjct: 606 YCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVS 665
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLD 229
+ T +V++ G K + EA +F M + + D +++ D
Sbjct: 666 VSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSD 709
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 103/195 (52%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
+ G+ V+Y L+ K G + +L EM+ KG+ P + TF++L++GF G++
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
++ +M+ G+ PN T+NSL+ YC+R+ ++ A ++ M RG P TY +L+
Sbjct: 579 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
G CK +++ A L EM +G V T++ L+ GF + K L A+E+F M+ G
Sbjct: 639 KGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLA 698
Query: 184 PNLQTCTVILDGLFK 198
+ + D +K
Sbjct: 699 ADKEIFDFFSDTKYK 713
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 131/325 (40%), Gaps = 46/325 (14%)
Query: 33 LLYEMMQKGVMPDVQT--FSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVT---YNSL 87
L+Y G P V F +LVD GL+ AR V M++ G+ +V + Y +
Sbjct: 164 LVYTYKDWGSDPRVFDVFFQVLVDF----GLLREARRVFEKMLNYGLVLSVDSCNVYLTR 219
Query: 88 IGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGL 147
+ C ++ A+ VF G +V +YN +IH C++ + A LL M +G
Sbjct: 220 LSKDC--YKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGY 277
Query: 148 KPDVVTWTALVGGFCQVG-----------------KPLA------------------AKE 172
PDV++++ +V G+C+ G KP + A+E
Sbjct: 278 TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 173 LFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMC 232
F M G +P+ T ++DG K A F M DI D++ Y ++ G C
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 233 XXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRC 292
D+ TF +I G C G + +A + M + GC PN
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 293 SYNVFVHGLLRKLDISRSEKYLQIM 317
+Y + GL ++ D+ + + L M
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEM 482
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 161 bits (407), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/214 (36%), Positives = 127/214 (59%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
+ KGI P +++YNC+I GRW + LL M++K + PD+ TFS L++ F KE V
Sbjct: 37 HEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKV 96
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
S A + M+ + P +TYNS+I G+C + ++++A ++ D M +GC P VVT+++L
Sbjct: 97 SEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTL 156
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
I+G+CK K VD + + EM G+ + VT+T L+ GFCQVG AA++L M G
Sbjct: 157 INGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGV 216
Query: 183 VPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSD 216
P+ T +L GL + +A ++ ++KS+
Sbjct: 217 APDYITFHCMLAGLCSKKELRKAFAILEDLQKSE 250
Score = 131 bits (330), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 117/226 (51%)
Query: 7 IQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGAR 66
I+ +V ++ L K G L EM +KG+ P+V T++ ++D F G S A
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 67 CVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGW 126
++ M+ + P++VT+++LI + ++ EA +++ M+R P+ +TYNS+I G+
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGF 125
Query: 127 CKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNL 186
CK VD A +L M ++G PDVVT++ L+ G+C+ + E+F M G V N
Sbjct: 126 CKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 185
Query: 187 QTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMC 232
T T ++ G + A L M + D + ++ ML G+C
Sbjct: 186 VTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLC 231
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 88/212 (41%)
Query: 114 PSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKEL 173
VV +++ CK + A L EM +G+ P+V+T+ ++ FC G+ A +L
Sbjct: 8 ADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQL 67
Query: 174 FFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCX 233
M E P++ T + +++ K R SEA +++ M + I + YN M+DG C
Sbjct: 68 LRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCK 127
Query: 234 XXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCS 293
D TF+ +I G C +D E+ M G N +
Sbjct: 128 QDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVT 187
Query: 294 YNVFVHGLLRKLDISRSEKYLQIMKCKGFPVD 325
Y +HG + D+ ++ L M G D
Sbjct: 188 YTTLIHGFCQVGDLDAAQDLLNEMISCGVAPD 219
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 82/192 (42%)
Query: 142 MVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRF 201
M +K DVV TA+V C+ G + A+ LF M E G PN+ T ++D
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 202 HSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNI 261
S+A L R M + I+ DIV ++ +++ T T+N
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 262 MIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKG 321
MI G C + +D+A+ +L M GC P+ +++ ++G + + + M +G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 322 FPVDANTTELLI 333
+ T LI
Sbjct: 181 IVANTVTYTTLI 192
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 63/158 (39%), Gaps = 1/158 (0%)
Query: 190 TVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXX 249
T I+D L K H A +LF M + I +++ YN M+D C
Sbjct: 14 TAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIE 73
Query: 250 XXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISR 309
D TF+ +I E + EAEE+ M P +YN + G ++ +
Sbjct: 74 KQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDD 133
Query: 310 SEKYLQIMKCKGFPVDANTTELLICIY-SANKGDNAFQ 346
+++ L M KG D T LI Y A + DN +
Sbjct: 134 AKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGME 171
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/214 (36%), Positives = 127/214 (59%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
+ KGI P +++Y+ +I + GRW + LL +M+++ + PDV TFS L++ KEG V
Sbjct: 103 HDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKV 162
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
S A + G M+ G+ P +TYNS+I G+C + ++ +A ++ D M + C P VVT+++L
Sbjct: 163 SEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTL 222
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
I+G+CK K VD + + EM G+ + VT+T L+ GFCQVG AA++L M G
Sbjct: 223 INGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGV 282
Query: 183 VPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSD 216
PN T +L L + +A ++ ++KS+
Sbjct: 283 APNYITFQSMLASLCSKKELRKAFAILEDLQKSE 316
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 118/226 (52%)
Query: 7 IQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGAR 66
I+ +V YN +I L K G L EM KG+ PDV T+S ++D F + G + A
Sbjct: 72 IKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAE 131
Query: 67 CVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGW 126
++ M+ + P+VVT+++LI ++ EA +++ M+RRG P+ +TYNS+I G+
Sbjct: 132 QLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGF 191
Query: 127 CKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNL 186
CK ++ A +L M ++ PDVVT++ L+ G+C+ + E+F M G V N
Sbjct: 192 CKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 251
Query: 187 QTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMC 232
T T ++ G + A L M S + + + + ML +C
Sbjct: 252 VTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLC 297
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 145/313 (46%), Gaps = 4/313 (1%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G +P +V++ L+ GL GR + L+ M+++G P + +++G K G A
Sbjct: 5 GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESA 60
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ M ++ +VV YN++I C A +F M +G P V+TY+ +I
Sbjct: 61 LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+C+ A LL +M+ + PDVVT++AL+ + GK A+E++ M G P
Sbjct: 121 FCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPT 180
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
T ++DG K ++A + +M D+V ++ +++G C
Sbjct: 181 TITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFC 240
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
+T T+ +I G C G LD A++LL M +G PN ++ + L K
Sbjct: 241 EMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKK 300
Query: 306 DISRSEKYLQIMK 318
++ ++ L+ ++
Sbjct: 301 ELRKAFAILEDLQ 313
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 128/285 (44%), Gaps = 4/285 (1%)
Query: 37 MMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQ 96
M++ G PDV TF+ L++G EG V A ++ MV G +P Y ++I G C
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 97 MEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTA 156
E A+ + M VV YN++I CK A L EM ++G+ PDV+T++
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 157 LVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSD 216
++ FC+ G+ A++L M E P++ T + +++ L K SEA ++ M +
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 217 IDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAE 276
I + YN M+DG C D TF+ +I G C +D
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 277 ELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKG 321
E+ M G N +Y +HG + D+ ++ L +M G
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSG 281
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 150/296 (50%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
I P +S+N +I+ L K + M ++ +PD T+ L+DG KE + A
Sbjct: 182 NISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEA 241
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ M G P+ V YN LI G C + + K+ D M +GC+P+ VTYN+LIHG
Sbjct: 242 VLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHG 301
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
C +D+A+ LL MV+ P+ VT+ L+ G + + A L +M+E G N
Sbjct: 302 LCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLN 361
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+V++ GLFK EAMSL+R M + +IVVY+V++DG+C
Sbjct: 362 QHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILN 421
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGL 301
+ YT++ +++G GL +EA ++ M++ GC N+ Y+V + GL
Sbjct: 422 RMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGL 477
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 178/383 (46%), Gaps = 43/383 (11%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCV 68
P +Y L+ GL K R E LL EM +G P +++L+DG K+G ++ +
Sbjct: 220 PDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKL 279
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
+ M G PN VTYN+LI G CL+ ++++A+ + + MV C+P+ VTY +LI+G K
Sbjct: 280 VDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVK 339
Query: 129 VKDVDRAICLLG-----------------------------------EMVNEGLKPDVVT 153
+ A+ LL +M +G KP++V
Sbjct: 340 QRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVV 399
Query: 154 WTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAME 213
++ LV G C+ GKP AKE+ M G +PN T + ++ G FK EA+ +++ M+
Sbjct: 400 YSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMD 459
Query: 214 KSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLD 273
K+ + Y+V++DG+C DT ++ +I+GLC G +D
Sbjct: 460 KTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMD 519
Query: 274 EAEELLMRM---EENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTE 330
A +L M EE P+ +YN+ + GL + DISR+ L M +G D T
Sbjct: 520 AALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCN 579
Query: 331 LLICIYSA-----NKGDNAFQEL 348
+ S +KG + +EL
Sbjct: 580 TFLNTLSEKSNSCDKGRSFLEEL 602
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 141/298 (47%), Gaps = 4/298 (1%)
Query: 10 TIVSYNCLIQGLFKFGRWKEGAG----LLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
++ S+N ++ + G + G ++ M + P+ +F++++ K V A
Sbjct: 147 SVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRA 206
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
V M P+ TY +L+ G C +++EA+ + D M GC PS V YN LI G
Sbjct: 207 IEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDG 266
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
CK D+ R L+ M +G P+ VT+ L+ G C GK A L M +PN
Sbjct: 267 LCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPN 326
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
T +++GL K R ++A+ L +ME+ L+ +Y+V++ G+
Sbjct: 327 DVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWR 386
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLR 303
+ +++++ GLC EG +EA+E+L RM +GC PN +Y+ + G +
Sbjct: 387 KMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFK 444
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 105/242 (43%), Gaps = 12/242 (4%)
Query: 118 TYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGK---PLAAKELF 174
T +S+I + D D LL + L+ V+ + + F GK P A +LF
Sbjct: 79 TLSSMIESYANSGDFDSVEKLLSRI---RLENRVIIERSFIVVFRAYGKAHLPDKAVDLF 135
Query: 175 FTMKEHGQVP-NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDI----VVYNVMLD 229
M + + ++++ +L+ + + + + + S+++++I + +N+++
Sbjct: 136 HRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIK 195
Query: 230 GMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPP 289
+C D YT+ ++ GLC E +DEA LL M+ GC P
Sbjct: 196 ALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSP 255
Query: 290 NRCSYNVFVHGLLRKLDISRSEKYLQIMKCKG-FPVDANTTELLICIYSANKGDNAFQEL 348
+ YNV + GL +K D++R K + M KG P + L+ + K D A L
Sbjct: 256 SPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLL 315
Query: 349 QQ 350
++
Sbjct: 316 ER 317
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/343 (31%), Positives = 162/343 (47%), Gaps = 3/343 (0%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
GI+PTIV+YN L+QG GR + ++ EM KG PD+QT++ ++ EG S
Sbjct: 255 GIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASE- 313
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
V+ M +G+ P+ V+YN LI G +E A D MV++G +P+ TYN+LIHG
Sbjct: 314 --VLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHG 371
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
++ A L+ E+ +G+ D VT+ L+ G+CQ G A L M G P
Sbjct: 372 LFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPT 431
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
T T ++ L + EA LF + + D+V+ N ++DG C
Sbjct: 432 QFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLK 491
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
D T+N ++RGLC EG +EA EL+ M+ G P+ SYN + G +K
Sbjct: 492 EMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKG 551
Query: 306 DISRSEKYLQIMKCKGFPVDANTTELLICIYSANKGDNAFQEL 348
D + M GF T L+ S N+ +EL
Sbjct: 552 DTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEEL 594
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 142/307 (46%), Gaps = 36/307 (11%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G+ PT +YN LI GLF + + L+ E+ +KG++ D T++IL++G+ + G
Sbjct: 356 QGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKK 415
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A + M+ G++P TY SLI C +++ EA ++F+ +V +G P +V N+L+
Sbjct: 416 AFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMD 475
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G C + ++DRA LL EM + PD VT+ L+ G C GK A+EL MK G P
Sbjct: 476 GHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKP 535
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
+ + ++ G K A + M + ++ YN +L G+
Sbjct: 536 DHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKN---------- 585
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
EG L AEELL M+ G PN S+ + +
Sbjct: 586 -----------------------QEGEL--AEELLREMKSEGIVPNDSSFCSVIEA-MSN 619
Query: 305 LDISRSE 311
LD +S+
Sbjct: 620 LDAKKSD 626
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 133/296 (44%), Gaps = 3/296 (1%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KG P + N ++ L + R + +M + + +V TF+I+++ KEG +
Sbjct: 184 KGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKK 243
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A+ +G M G++P +VTYN+L+ G+ LR ++E A + M +G P + TYN ++
Sbjct: 244 AKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILS 303
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
C + RA +L EM GL PD V++ L+ G G A M + G VP
Sbjct: 304 WMC---NEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVP 360
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
T ++ GLF A L R + + I LD V YN++++G C
Sbjct: 361 TFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALH 420
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHG 300
+T+ +I LC + EA+EL ++ G P+ N + G
Sbjct: 421 DEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDG 476
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 128/297 (43%), Gaps = 3/297 (1%)
Query: 29 EGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLI 88
E Y M +KG P +T + ++ + + A M + ++ NV T+N +I
Sbjct: 173 EAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMI 232
Query: 89 GGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLK 148
C ++++A +M G P++VTYN+L+ G+ ++ A ++ EM ++G +
Sbjct: 233 NVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQ 292
Query: 149 PDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSL 208
PD+ T+ ++ C G+ A E+ MKE G VP+ + +++ G A +
Sbjct: 293 PDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAY 349
Query: 209 FRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCW 268
M K + YN ++ G+ D+ T+NI+I G C
Sbjct: 350 RDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQ 409
Query: 269 EGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVD 325
G +A L M +G P + +Y ++ L RK +++ + + KG D
Sbjct: 410 HGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPD 466
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 82/194 (42%), Gaps = 8/194 (4%)
Query: 151 VVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFR 210
+ + LV CQ+ A E F+ MKE G P +TC IL L + A +
Sbjct: 155 TILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYA 214
Query: 211 AMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEG 270
M + +I ++ +N+M++ +C T+N +++G G
Sbjct: 215 DMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRG 274
Query: 271 LLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTE 330
++ A ++ M+ G P+ +YN + + + R+ + L+ MK G D+ +
Sbjct: 275 RIEGARLIISEMKSKGFQPDMQTYNPILSWMCNE---GRASEVLREMKEIGLVPDSVSYN 331
Query: 331 LLI--CIYSANKGD 342
+LI C +N GD
Sbjct: 332 ILIRGC---SNNGD 342
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 157 bits (398), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 158/317 (49%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KG QP+ +Y LI+ L G + L EM+ +G P+V T+++L+DG ++G +
Sbjct: 295 KGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEE 354
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A V MV + P+V+TYN+LI GYC ++ A ++ +M +R C P+V T+N L+
Sbjct: 355 ANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELME 414
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G C+V +A+ LL M++ GL PD+V++ L+ G C+ G A +L +M P
Sbjct: 415 GLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEP 474
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
+ T T I++ K A + M + I LD V ++DG+C
Sbjct: 475 DCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFIL 534
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
++ N+++ L + E +L ++ + G P+ +Y V GL+R
Sbjct: 535 ETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRS 594
Query: 305 LDISRSEKYLQIMKCKG 321
DI+ S + L++MK G
Sbjct: 595 GDITGSFRILELMKLSG 611
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 158/319 (49%)
Query: 7 IQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGAR 66
I P++++YN LI G K GR LL M ++ P+V+TF+ L++G + G A
Sbjct: 367 IFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAV 426
Query: 67 CVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGW 126
++ M+ G+ P++V+YN LI G C M A K+ M P +T+ ++I+ +
Sbjct: 427 HLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAF 486
Query: 127 CKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNL 186
CK D A LG M+ +G+ D VT T L+ G C+VGK A + T+ + +
Sbjct: 487 CKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTP 546
Query: 187 QTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXX 246
+ VILD L K E +++ + K + +V Y ++DG+
Sbjct: 547 HSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILEL 606
Query: 247 XXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLD 306
+ Y + I+I GLC G ++EAE+LL M+++G PN +Y V V G +
Sbjct: 607 MKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGK 666
Query: 307 ISRSEKYLQIMKCKGFPVD 325
+ R+ + ++ M +G+ ++
Sbjct: 667 LDRALETVRAMVERGYELN 685
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 150/326 (46%), Gaps = 4/326 (1%)
Query: 12 VSYNCLIQGLFKFGRWKEG--AGLLYEMMQK-GVMPDVQTFSILVDGFGKEGLVSGARCV 68
++Y C L + G A + Y M+ G + + + +V+ K G A
Sbjct: 158 LNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMF 217
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRR-GCLPSVVTYNSLIHGWC 127
M ++ +G + SL+ G+C + +A+KVFD+M + C P+ V+Y+ LIHG C
Sbjct: 218 MSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLC 277
Query: 128 KVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQ 187
+V ++ A L +M +G +P T+T L+ C G A LF M G PN+
Sbjct: 278 EVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVH 337
Query: 188 TCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXX 247
T TV++DGL + EA + R M K I ++ YN +++G C
Sbjct: 338 TYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVM 397
Query: 248 XXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDI 307
+ TFN ++ GLC G +A LL RM +NG P+ SYNV + GL R+ +
Sbjct: 398 EKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHM 457
Query: 308 SRSEKYLQIMKCKGFPVDANTTELLI 333
+ + K L M C D T +I
Sbjct: 458 NTAYKLLSSMNCFDIEPDCLTFTAII 483
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 148/331 (44%), Gaps = 1/331 (0%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
+ G ++ Y ++ L K G + + ++++ G + D + L+ GF + +
Sbjct: 188 ADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLR 247
Query: 64 GARCVMGFMV-HVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
A V M V PN V+Y+ LI G C ++EEA + D M +GC PS TY L
Sbjct: 248 DALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVL 307
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
I C +D+A L EM+ G KP+V T+T L+ G C+ GK A + M +
Sbjct: 308 IKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRI 367
Query: 183 VPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXX 242
P++ T +++G K A L MEK ++ +N +++G+C
Sbjct: 368 FPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVH 427
Query: 243 XXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLL 302
D ++N++I GLC EG ++ A +LL M P+ ++ ++
Sbjct: 428 LLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFC 487
Query: 303 RKLDISRSEKYLQIMKCKGFPVDANTTELLI 333
++ + +L +M KG +D T LI
Sbjct: 488 KQGKADVASAFLGLMLRKGISLDEVTGTTLI 518
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 115/227 (50%), Gaps = 4/227 (1%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+ P IVSYN LI GL + G LL M + PD TF+ +++ F K+G A
Sbjct: 436 GLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVA 495
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+G M+ G+ + VT +LI G C + +A+ + + +V+ L + + N ++
Sbjct: 496 SAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDM 555
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
K V + +LG++ GL P VVT+T LV G + G + + MK G +PN
Sbjct: 556 LSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPN 615
Query: 186 LQTCTVILDGLFKCRFH--SEAMSLFRAMEKSDIDLDIVVYNVMLDG 230
+ T+I++GL C+F EA L AM+ S + + V Y VM+ G
Sbjct: 616 VYPYTIIINGL--CQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKG 660
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 82/155 (52%)
Query: 7 IQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGAR 66
I T S N ++ L K + KE +L ++ + G++P V T++ LVDG + G ++G+
Sbjct: 542 ILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSF 601
Query: 67 CVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGW 126
++ M G PNV Y +I G C ++EEA K+ M G P+ VTY ++ G+
Sbjct: 602 RILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGY 661
Query: 127 CKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGF 161
+DRA+ + MV G + + +++L+ GF
Sbjct: 662 VNNGKLDRALETVRAMVERGYELNDRIYSSLLQGF 696
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 66/124 (53%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
N G+ P++V+Y L+ GL + G +L M G +P+V ++I+++G + G V
Sbjct: 573 NKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRV 632
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
A ++ M GV PN VTY ++ GY +++ A++ MV RG + Y+SL
Sbjct: 633 EEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSL 692
Query: 123 IHGW 126
+ G+
Sbjct: 693 LQGF 696
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 92/213 (43%), Gaps = 23/213 (10%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G P + Y +I GL +FGR +E LL M GV P+ T++++V G+ G + A
Sbjct: 611 GCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRA 670
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQ---MEEAMKVFDLMVRR------------ 110
+ MV G E N Y+SL+ G+ L + E V D+ +R
Sbjct: 671 LETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISV 730
Query: 111 -----GCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVG 165
GC+ + + L+ CK D + L+ ++ G+ + ++ +C
Sbjct: 731 VEQLGGCISGLCIF--LVTRLCKEGRTDESNDLVQNVLERGVFLEK-AMDIIMESYCSKK 787
Query: 166 KPLAAKELFFTMKEHGQVPNLQTCTVILDGLFK 198
K EL + + G VP+ ++ +++ GL K
Sbjct: 788 KHTKCMELITLVLKSGFVPSFKSFCLVIQGLKK 820
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 157 bits (398), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 160/331 (48%), Gaps = 2/331 (0%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G P ++YN LI+G K G+ KE + + M+++GV P+V T++ L+DG G
Sbjct: 276 RGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKE 335
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A ++ M+ EPN VTYN +I C + +A+++ +LM +R P +TYN L+
Sbjct: 336 ALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLG 395
Query: 125 GWCKVKDVDRAICLLGEMVNEG--LKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
G C D+D A LL M+ + PDV+++ AL+ G C+ + A +++ + E
Sbjct: 396 GLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLG 455
Query: 183 VPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXX 242
+ T ++L+ K ++AM L++ + S I + Y M+DG C
Sbjct: 456 AGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKG 515
Query: 243 XXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLL 302
+ +N ++ LC EG LD+A L M+ + P+ S+N+ + G L
Sbjct: 516 LLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSL 575
Query: 303 RKLDISRSEKYLQIMKCKGFPVDANTTELLI 333
+ DI +E L M G D T LI
Sbjct: 576 KAGDIKSAESLLVGMSRAGLSPDLFTYSKLI 606
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 158/318 (49%), Gaps = 3/318 (0%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
+ P + SYN +I+G + ++ L EM G + T+ IL+D F K G + A
Sbjct: 172 SLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEA 231
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ M +G+E ++V Y SLI G+C +++ +FD ++ RG P +TYN+LI G
Sbjct: 232 MGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRG 291
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+CK+ + A + M+ G++P+V T+T L+ G C VGK A +L M E + PN
Sbjct: 292 FCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPN 351
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
T +I++ L K ++A+ + M+K D + YN++L G+C
Sbjct: 352 AVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLY 411
Query: 246 XXXXXXXXF--DTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLR 303
D ++N +I GLC E L +A ++ + E +R + N+ ++ L+
Sbjct: 412 LMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLK 471
Query: 304 KLDISRS-EKYLQIMKCK 320
D++++ E + QI K
Sbjct: 472 AGDVNKAMELWKQISDSK 489
Score = 141 bits (355), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 155/325 (47%), Gaps = 2/325 (0%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G++P + +Y LI GL G+ KE LL M++K P+ T++I+++ K+GLV+
Sbjct: 311 RGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVAD 370
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCL--PSVVTYNSL 122
A ++ M P+ +TYN L+GG C + ++EA K+ LM++ P V++YN+L
Sbjct: 371 AVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNAL 430
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
IHG CK + +A+ + +V + D VT L+ + G A EL+ + +
Sbjct: 431 IHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKI 490
Query: 183 VPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXX 242
V N T T ++DG K + A L M S++ + YN +L +C
Sbjct: 491 VRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWR 550
Query: 243 XXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLL 302
D +FNIMI G G + AE LL+ M G P+ +Y+ ++ L
Sbjct: 551 LFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFL 610
Query: 303 RKLDISRSEKYLQIMKCKGFPVDAN 327
+ + + + M GF DA+
Sbjct: 611 KLGYLDEAISFFDKMVDSGFEPDAH 635
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 141/303 (46%), Gaps = 3/303 (0%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
MK S G ++V++ LI K G+ E G L EM G+ D+ ++ L+ GF G
Sbjct: 203 MKGS-GCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCG 261
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
+ + + ++ G P +TYN+LI G+C Q++EA ++F+ M+ RG P+V TY
Sbjct: 262 ELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYT 321
Query: 121 SLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEH 180
LI G C V A+ LL M+ + +P+ VT+ ++ C+ G A E+ MK+
Sbjct: 322 GLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKR 381
Query: 181 GQVPNLQTCTVILDGLFKCRFHSEAMSLFRAM--EKSDIDLDIVVYNVMLDGMCXXXXXX 238
P+ T ++L GL EA L M + S D D++ YN ++ G+C
Sbjct: 382 RTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLH 441
Query: 239 XXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFV 298
D T NI++ G +++A EL ++ ++ N +Y +
Sbjct: 442 QALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMI 501
Query: 299 HGL 301
G
Sbjct: 502 DGF 504
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 122/285 (42%), Gaps = 35/285 (12%)
Query: 68 VMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWC 127
V+ M+ G NV +N L+ G C + +A+ + M R +P V +YN++I G+C
Sbjct: 129 VLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFC 188
Query: 128 KVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAA----------------- 170
+ K++++A+ L EM G +VTW L+ FC+ GK A
Sbjct: 189 EGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLV 248
Query: 171 ------------------KELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAM 212
K LF + E G P T ++ G K EA +F M
Sbjct: 249 VYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFM 308
Query: 213 EKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLL 272
+ + ++ Y ++DG+C + T+NI+I LC +GL+
Sbjct: 309 IERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLV 368
Query: 273 DEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIM 317
+A E++ M++ P+ +YN+ + GL K D+ + K L +M
Sbjct: 369 ADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM 413
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 120/267 (44%), Gaps = 35/267 (13%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRW------------KEGAG-------LLYEMMQKG 41
+K+S P ++SYN LI GL K R K GAG LL ++ G
Sbjct: 414 LKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAG 473
Query: 42 ----------------VMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYN 85
++ + T++ ++DGF K G+++ A+ ++ M ++P+V YN
Sbjct: 474 DVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYN 533
Query: 86 SLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNE 145
L+ C +++A ++F+ M R P VV++N +I G K D+ A LL M
Sbjct: 534 CLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRA 593
Query: 146 GLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEA 205
GL PD+ T++ L+ F ++G A F M + G P+ C +L +
Sbjct: 594 GLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKL 653
Query: 206 MSLFRAMEKSDIDLDIVVYNVMLDGMC 232
L + + DI LD + ++D MC
Sbjct: 654 TELVKKLVDKDIVLDKELTCTVMDYMC 680
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 112/246 (45%), Gaps = 3/246 (1%)
Query: 72 MVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKD 131
M+ N V+ + L+ Y + A V LM++RG +V +N L+ G C+ +
Sbjct: 98 MLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLE 157
Query: 132 VDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTV 191
+A+ LL EM L PDV ++ ++ GFC+ + A EL MK G +L T +
Sbjct: 158 CGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGI 217
Query: 192 ILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXX 251
++D K EAM + M+ ++ D+VVY ++ G C
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277
Query: 252 XXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSE 311
T+N +IRG C G L EA E+ M E G PN +Y + GL + +++
Sbjct: 278 DSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGL---CGVGKTK 334
Query: 312 KYLQIM 317
+ LQ++
Sbjct: 335 EALQLL 340
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 83/206 (40%), Gaps = 1/206 (0%)
Query: 96 QMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWT 155
Q++ A+ VF V G + N+L+ + ++ + A +M+ + V+ +
Sbjct: 53 QLKNAVSVFQQAVDSGSSLAFAG-NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLS 111
Query: 156 ALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKS 215
L+ + Q+ K A + M + G N+ ++L GL + +A+SL R M ++
Sbjct: 112 GLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRN 171
Query: 216 DIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEA 275
+ D+ YN ++ G C + T+ I+I C G +DEA
Sbjct: 172 SLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEA 231
Query: 276 EELLMRMEENGCPPNRCSYNVFVHGL 301
L M+ G + Y + G
Sbjct: 232 MGFLKEMKFMGLEADLVVYTSLIRGF 257
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 166/331 (50%), Gaps = 5/331 (1%)
Query: 6 GIQPTIVSYNCLIQGLFKFG---RWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
G P +VSYN LI G K G + + +L EM++ V P++ TF+IL+DGF K+ +
Sbjct: 253 GCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNL 312
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
G+ V M+ V+PNV++YNSLI G C ++ EA+ + D MV G P+++TYN+L
Sbjct: 313 PGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNAL 372
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
I+G+CK + A+ + G + +G P + L+ +C++GK L M+ G
Sbjct: 373 INGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGI 432
Query: 183 VPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXX 242
VP++ T ++ GL + A LF + + D+V ++++++G C
Sbjct: 433 VPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAM 491
Query: 243 XXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRME-ENGCPPNRCSYNVFVHGL 301
T+NI+++G C EG L A + +ME E N SYNV + G
Sbjct: 492 LLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGY 551
Query: 302 LRKLDISRSEKYLQIMKCKGFPVDANTTELL 332
+K + + L M KG + T E++
Sbjct: 552 SQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 153/299 (51%), Gaps = 4/299 (1%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGF---GKEGL 61
+ IQP + ++N +I L K G+ + ++ +M G P+V +++ L+DG+ G G
Sbjct: 217 RKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGK 276
Query: 62 VSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNS 121
+ A V+ MV V PN+ T+N LI G+ + +MKVF M+ + P+V++YNS
Sbjct: 277 MYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNS 336
Query: 122 LIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHG 181
LI+G C + AI + +MV+ G++P+++T+ AL+ GFC+ A ++F ++K G
Sbjct: 337 LINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQG 396
Query: 182 QVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXX 241
VP + +++D K + +L ME+ I D+ YN ++ G+C
Sbjct: 397 AVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAK 456
Query: 242 XXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHG 300
D TF+I++ G C +G +A LL M + G P +YN+ + G
Sbjct: 457 KLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKG 514
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 127/269 (47%), Gaps = 3/269 (1%)
Query: 58 KEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVV 117
KE + V M+ ++PNV T+N +I C +M +A V + M GC P+VV
Sbjct: 200 KENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVV 259
Query: 118 TYNSLIHGWCKVK---DVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELF 174
+YN+LI G+CK+ + +A +L EMV + P++ T+ L+ GF + + ++F
Sbjct: 260 SYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVF 319
Query: 175 FTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXX 234
M + PN+ + +++GL SEA+S+ M + + +++ YN +++G C
Sbjct: 320 KEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKN 379
Query: 235 XXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSY 294
T +N++I C G +D+ L ME G P+ +Y
Sbjct: 380 DMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTY 439
Query: 295 NVFVHGLLRKLDISRSEKYLQIMKCKGFP 323
N + GL R +I ++K + KG P
Sbjct: 440 NCLIAGLCRNGNIEAAKKLFDQLTSKGLP 468
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 111/213 (52%), Gaps = 3/213 (1%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
S G+QP +++YN LI G K KE + + +G +P + +++L+D + K G +
Sbjct: 359 SAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKID 418
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
+ M G+ P+V TYN LI G C +E A K+FD + +G LP +VT++ L+
Sbjct: 419 DGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILM 477
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTM-KEHGQ 182
G+C+ + +A LL EM GLKP +T+ ++ G+C+ G AA + M KE
Sbjct: 478 EGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRL 537
Query: 183 VPNLQTCTVILDGLF-KCRFHSEAMSLFRAMEK 214
N+ + V+L G K + M L +EK
Sbjct: 538 RMNVASYNVLLQGYSQKGKLEDANMLLNEMLEK 570
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 109/235 (46%), Gaps = 3/235 (1%)
Query: 103 VFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFC 162
V+ M+RR P+V T+N +I+ CK +++A ++ +M G P+VV++ L+ G+C
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269
Query: 163 QVG---KPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDL 219
++G K A + M E+ PNL T +++DG +K +M +F+ M D+
Sbjct: 270 KLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKP 329
Query: 220 DIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELL 279
+++ YN +++G+C + T+N +I G C +L EA ++
Sbjct: 330 NVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMF 389
Query: 280 MRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLIC 334
++ G P YN+ + + I + M+ +G D T LI
Sbjct: 390 GSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIA 444
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 161/335 (48%), Gaps = 6/335 (1%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+GI P +V+Y LI+GL + GR E G+ +++++G+ P + T+S L+DGF K G +
Sbjct: 385 QGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS 444
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
+ M+ +G P+VV Y L+ G + M AM+ M+ + +VV +NSLI
Sbjct: 445 GFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLID 504
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALV------GGFCQVGKPLAAKELFFTMK 178
GWC++ D A+ + M G+KPDV T+T ++ FC+ KP +LF M+
Sbjct: 505 GWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQ 564
Query: 179 EHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXX 238
+ ++ C V++ LFKC +A F + + ++ DIV YN M+ G C
Sbjct: 565 RNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLD 624
Query: 239 XXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFV 298
+T T I+I LC +D A + M E G PN +Y +
Sbjct: 625 EAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLM 684
Query: 299 HGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLI 333
+ +DI S K + M+ KG + ++I
Sbjct: 685 DWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIII 719
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 165/349 (47%), Gaps = 16/349 (4%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+GI+P +++Y+ LI G FK G G L + + KGV DV FS +D + K G ++
Sbjct: 315 RGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLAT 374
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A V M+ G+ PNVVTY LI G C ++ EA ++ +++RG PS+VTY+SLI
Sbjct: 375 ASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLID 434
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G+CK ++ L +M+ G PDVV + LV G + G L A + F++K GQ
Sbjct: 435 GFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHA--MRFSVKMLGQSI 492
Query: 185 NLQTCTV--ILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVY------NVMLDGMCXXXX 236
L ++DG + EA+ +FR M I D+ + ++M D C
Sbjct: 493 RLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMK 552
Query: 237 XXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNV 296
D N++I L +++A + + E P+ +YN
Sbjct: 553 PTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNT 612
Query: 297 FVHGL--LRKLDISRSEKYLQIMKCKGFPVDANTTELLICIYSANKGDN 343
+ G LR+LD +E+ +++K P NT L I I+ K ++
Sbjct: 613 MICGYCSLRRLD--EAERIFELLKVT--PFGPNTVTLTILIHVLCKNND 657
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 150/337 (44%), Gaps = 6/337 (1%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G P +V++ LI G K G L M Q+G+ PD+ +S L+DG+ K G++
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMG 340
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ +H GV+ +VV ++S I Y + A V+ M+ +G P+VVTY LI G
Sbjct: 341 HKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKG 400
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
C+ + A + G+++ G++P +VT+++L+ GFC+ G + L+ M + G P+
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPD 460
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+ V++DGL K AM M I L++VV+N ++DG C
Sbjct: 461 VVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFR 520
Query: 246 XXXXXXXXFDTYTFNIMIR------GLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVH 299
D TF ++R C +L M+ N + NV +H
Sbjct: 521 LMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIH 580
Query: 300 GLLRKLDISRSEKYLQIMKCKGFPVDANTTELLICIY 336
L + I + K+ + D T +IC Y
Sbjct: 581 LLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGY 617
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 144/362 (39%), Gaps = 76/362 (20%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G++P+IV+Y+ LI G K G + G L +M++ G PDV + +LVDG K+GL+
Sbjct: 420 RGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLH 479
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTY----- 119
A M+ + NVV +NSLI G+C ++ +EA+KVF LM G P V T+
Sbjct: 480 AMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR 539
Query: 120 ------------------------------------NSLIHGWCKVKDVDRAICLLGEMV 143
N +IH K ++ A ++
Sbjct: 540 VSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLI 599
Query: 144 NEGLKPDVVTWTALVGGFCQVGK--------------PL--------------------- 168
++PD+VT+ ++ G+C + + P
Sbjct: 600 EGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMD 659
Query: 169 AAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVML 228
A +F M E G PN T ++D K + LF M++ I IV Y++++
Sbjct: 660 GAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIII 719
Query: 229 DGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCP 288
DG+C D + I+IRG C G L EA L M NG
Sbjct: 720 DGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVK 779
Query: 289 PN 290
P+
Sbjct: 780 PD 781
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 139/291 (47%), Gaps = 1/291 (0%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G + IVS N +++GL + + + LL ++ G P+V TF L++GF K G +
Sbjct: 246 RGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDR 304
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A + M G+EP+++ Y++LI GY + K+F + +G VV ++S I
Sbjct: 305 AFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTID 364
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
+ K D+ A + M+ +G+ P+VVT+T L+ G CQ G+ A ++ + + G P
Sbjct: 365 VYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEP 424
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
++ T + ++DG KC +L+ M K D+V+Y V++DG+
Sbjct: 425 SIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFS 484
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYN 295
+ FN +I G C DEA ++ M G P+ ++
Sbjct: 485 VKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFT 535
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 73/149 (48%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCV 68
P V+ LI L K + M +KG P+ T+ L+D F K + G+ +
Sbjct: 640 PNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKL 699
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
M G+ P++V+Y+ +I G C R +++EA +F + LP VV Y LI G+CK
Sbjct: 700 FEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCK 759
Query: 129 VKDVDRAICLLGEMVNEGLKPDVVTWTAL 157
V + A L M+ G+KPD + AL
Sbjct: 760 VGRLVEAALLYEHMLRNGVKPDDLLQRAL 788
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 165/369 (44%), Gaps = 35/369 (9%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+ P + +Y+ +I G K G ++ GL E++ ++P+V F LVDGF K + A
Sbjct: 264 GVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTA 323
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYC--------------------------------- 92
R + MV GV+PN+ YN LI G+C
Sbjct: 324 RSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILING 383
Query: 93 --LRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPD 150
+ Q+ EA ++F M PS TYNSLIHG+CK ++++A+ L EM G++P+
Sbjct: 384 LCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPN 443
Query: 151 VVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFR 210
++T++ L+ G+C V AA L+F M G VP++ T T ++D FK EA+ L+
Sbjct: 444 IITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYS 503
Query: 211 AMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEG 270
M ++ I + + ++DG ++ F +I GLC G
Sbjct: 504 DMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNG 563
Query: 271 LLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTE 330
+ A M G P+ CSY + G L++ I+ + M G + +
Sbjct: 564 YILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQ 623
Query: 331 LLICIYSAN 339
LL Y AN
Sbjct: 624 LLARFYQAN 632
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 147/297 (49%)
Query: 37 MMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQ 96
M+ +G++PDV + +L K+GL S ++ M +G++PNV Y I C ++
Sbjct: 190 MISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNK 249
Query: 97 MEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTA 156
MEEA K+F+LM + G LP++ TY+++I G+CK +V +A L E++ L P+VV +
Sbjct: 250 MEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGT 309
Query: 157 LVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSD 216
LV GFC+ + + A+ LF M + G PNL ++ G K EA+ L ME +
Sbjct: 310 LVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLN 369
Query: 217 IDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAE 276
+ D+ Y ++++G+C + T+N +I G C E +++A
Sbjct: 370 LSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQAL 429
Query: 277 ELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLI 333
+L M +G PN +++ + G DI + M KG D T LI
Sbjct: 430 DLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALI 486
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 144/347 (41%), Gaps = 35/347 (10%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
S+G+ P + Y L Q FK G + + LL EM G+ P+V ++I + ++ +
Sbjct: 192 SRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKME 251
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLR----------------------------- 94
A + M GV PN+ TY+++I GYC
Sbjct: 252 EAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLV 311
Query: 95 ------HQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLK 148
++ A +F MV+ G P++ YN LIHG CK ++ A+ LL EM + L
Sbjct: 312 DGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLS 371
Query: 149 PDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSL 208
PDV T+T L+ G C + A LF MK P+ T ++ G K +A+ L
Sbjct: 372 PDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDL 431
Query: 209 FRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCW 268
M S ++ +I+ ++ ++DG C D T+ +I
Sbjct: 432 CSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFK 491
Query: 269 EGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQ 315
E + EA L M E G PN ++ V G ++ +S + + Q
Sbjct: 492 EANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQ 538
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 147/326 (45%), Gaps = 14/326 (4%)
Query: 16 CLIQGLF-KFGRWKEGAGLLYEMMQKGVMPDVQT-------FSILVDGFGKEGLVSGARC 67
CLI+ L + R E + + + + + D+Q+ FS+L+ F + GL A
Sbjct: 96 CLIKSLIERLKRHSEPSNMSHRLF--NALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALW 153
Query: 68 VMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWC 127
V M P+ S++ G R + + + LM+ RG +P V Y L
Sbjct: 154 VSREM---KCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCF 210
Query: 128 KVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQ 187
K + LL EM + G+KP+V +T + C+ K A+++F MK+HG +PNL
Sbjct: 211 KQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLY 270
Query: 188 TCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXX 247
T + ++DG K +A L++ + +++ ++VV+ ++DG C
Sbjct: 271 TYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHM 330
Query: 248 XXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDI 307
+ Y +N +I G C G + EA LL ME P+ +Y + ++GL + +
Sbjct: 331 VKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQV 390
Query: 308 SRSEKYLQIMKCKG-FPVDANTTELL 332
+ + + Q MK + FP A L+
Sbjct: 391 AEANRLFQKMKNERIFPSSATYNSLI 416
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 154 bits (389), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 140/278 (50%), Gaps = 1/278 (0%)
Query: 14 YNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMV 73
YN L+ L +FG +E L EM++ V PD+ TF+ LV+G+ K G V A+ + +++
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 74 HVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVD 133
G +P+ TY S I G+C R +++ A KVF M + GC + V+Y LI+G + K +D
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 134 RAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVIL 193
A+ LL +M ++ P+V T+T L+ C G+ A LF M E G P+ TV++
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
Query: 194 DGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXX 253
EA L M ++ + +++ YN ++ G C
Sbjct: 303 QSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNVHKAMGLLSKMLEQNLVP 362
Query: 254 FDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNR 291
D T+N +I G C G LD A LL MEE+G PN+
Sbjct: 363 -DLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQ 399
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 101/177 (57%), Gaps = 1/177 (0%)
Query: 12 VSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGF 71
VSY LI GLF+ + E LL +M P+V+T+++L+D G S A +
Sbjct: 226 VSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQ 285
Query: 72 MVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKD 131
M G++P+ Y LI +C ++EA + + M+ G +P+V+TYN+LI G+CK K+
Sbjct: 286 MSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK-KN 344
Query: 132 VDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQT 188
V +A+ LL +M+ + L PD++T+ L+ G C G +A L M+E G VPN +T
Sbjct: 345 VHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 116/256 (45%), Gaps = 35/256 (13%)
Query: 49 FSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMV 108
++ L+ + GLV + + M+ V P++ T+N+L+ GYC + EA + ++
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 109 RRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPL 168
+ GC P TY S I G C+ K+VD A + EM G + V++T L+ G + K
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 169 AAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVML 228
A L MK+ PN++T TV++D L SEAM+LF+ M +S I D +Y V+
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVL- 301
Query: 229 DGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCP 288
I+ C LDEA LL M ENG
Sbjct: 302 ----------------------------------IQSFCSGDTLDEASGLLEHMLENGLM 327
Query: 289 PNRCSYNVFVHGLLRK 304
PN +YN + G +K
Sbjct: 328 PNVITYNALIKGFCKK 343
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
+ GI+P Y LIQ E +GLL M++ G+MP+V T++ L+ GF K+ V
Sbjct: 287 SESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-V 345
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVT 118
A ++ M+ + P+++TYN+LI G C ++ A ++ LM G +P+ T
Sbjct: 346 HKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 81/209 (38%), Gaps = 21/209 (10%)
Query: 146 GLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEA 205
K +V ++ +LV C P ++ M +++C + D LF F
Sbjct: 55 NFKHNVTSYASLVTLLCSQEIPYEVPKITILM--------IKSCNSVRDALFVVDF---- 102
Query: 206 MSLFRAMEKSD-----IDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFN 260
R M K D L YN +L + D YTFN
Sbjct: 103 ---CRTMRKGDSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFN 159
Query: 261 IMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCK 320
++ G C G + EA++ + + + GC P+ +Y F+ G R+ ++ + K + M
Sbjct: 160 TLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQN 219
Query: 321 G-FPVDANTTELLICIYSANKGDNAFQEL 348
G + + T+L+ ++ A K D A L
Sbjct: 220 GCHRNEVSYTQLIYGLFEAKKIDEALSLL 248
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 140/296 (47%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G P++ + N ++ + K G L EM+++ + PDV TF+IL++ EG +
Sbjct: 193 GFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKS 252
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+M M G P +VTYN+++ YC + + + A+++ D M +G V TYN LIH
Sbjct: 253 SYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHD 312
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
C+ + + LL +M + P+ VT+ L+ GF GK L A +L M G PN
Sbjct: 313 LCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPN 372
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
T ++DG EA+ +F ME + V Y V+LDG+C
Sbjct: 373 HVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYM 432
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGL 301
T+ MI GLC G LDEA LL M ++G P+ +Y+ ++G
Sbjct: 433 RMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGF 488
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 154/332 (46%), Gaps = 70/332 (21%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
SKG+ + +YN LI L + R +G LL +M ++ + P+ T++ L++GF EG V
Sbjct: 296 SKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVL 355
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A ++ M+ G+ PN VT+N+LI G+ +EA+K+F +M +G PS V+Y L+
Sbjct: 356 IASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLL 415
Query: 124 HGWCKVKD-----------------------------------VDRAICLLGEMVNEGLK 148
G CK + +D A+ LL EM +G+
Sbjct: 416 DGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGID 475
Query: 149 PDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSL 208
PD+VT++AL+ GFC+VG+ AKE+ + G PN + ++ + EA+ +
Sbjct: 476 PDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRI 535
Query: 209 FRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCW 268
+ AM +L+G D +TFN+++ LC
Sbjct: 536 YEAM--------------ILEGHTR---------------------DHFTFNVLVTSLCK 560
Query: 269 EGLLDEAEELLMRMEENGCPPNRCSYNVFVHG 300
G + EAEE + M +G PN S++ ++G
Sbjct: 561 AGKVAEAEEFMRCMTSDGILPNTVSFDCLING 592
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 149/327 (45%), Gaps = 1/327 (0%)
Query: 12 VSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGF 71
++Y +I GL K G E LL EM + G+ PD+ T+S L++GF K G A+ ++
Sbjct: 444 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 503
Query: 72 MVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKD 131
+ VG+ PN + Y++LI C ++EA+++++ M+ G T+N L+ CK
Sbjct: 504 IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 563
Query: 132 VDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTV 191
V A + M ++G+ P+ V++ L+ G+ G+ L A +F M + G P T
Sbjct: 564 VAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGS 623
Query: 192 ILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXX 251
+L GL K EA +++ +D V+YN +L MC
Sbjct: 624 LLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS 683
Query: 252 XXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENG-CPPNRCSYNVFVHGLLRKLDISRS 310
D+YT+ +I GLC +G A E G PN+ Y FV G+ +
Sbjct: 684 ILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAG 743
Query: 311 EKYLQIMKCKGFPVDANTTELLICIYS 337
+ + M G D TT +I YS
Sbjct: 744 IYFREQMDNLGHTPDIVTTNAMIDGYS 770
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 138/304 (45%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
M +KG+ P+ VSY L+ GL K + G M + GV T++ ++DG K G
Sbjct: 398 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 457
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
+ A ++ M G++P++VTY++LI G+C + + A ++ + R G P+ + Y+
Sbjct: 458 FLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYS 517
Query: 121 SLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEH 180
+LI+ C++ + AI + M+ EG D T+ LV C+ GK A+E M
Sbjct: 518 TLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSD 577
Query: 181 GQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXX 240
G +PN + +++G +A S+F M K Y +L G+C
Sbjct: 578 GILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREA 637
Query: 241 XXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHG 300
DT +N ++ +C G L +A L M + P+ +Y + G
Sbjct: 638 EKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISG 697
Query: 301 LLRK 304
L RK
Sbjct: 698 LCRK 701
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 142/360 (39%), Gaps = 36/360 (10%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
S GI P VS++CLI G G + + EM + G P T+ L+ G K G +
Sbjct: 575 TSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHL 634
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
A + + V + V YN+L+ C + +A+ +F MV+R LP TY SL
Sbjct: 635 REAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSL 694
Query: 123 IHGWCKVKDVDRAICLLGE------------------------------------MVNEG 146
I G C+ AI E M N G
Sbjct: 695 ISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLG 754
Query: 147 LKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAM 206
PD+VT A++ G+ ++GK +L M PNL T ++L G K + S +
Sbjct: 755 HTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSF 814
Query: 207 SLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGL 266
L+R++ + I D + + ++ G+C D YTFN++I
Sbjct: 815 LLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKC 874
Query: 267 CWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDA 326
C G ++ A +L+ M G ++ + + V L R S L M +G ++
Sbjct: 875 CANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPES 934
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 147/362 (40%), Gaps = 35/362 (9%)
Query: 7 IQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGAR 66
+ P V Y C + G+FK G+WK G +M G PD+ T + ++DG+ + G +
Sbjct: 720 VLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTN 779
Query: 67 CVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGW 126
++ M + PN+ TYN L+ GY R + + ++ ++ G LP +T +SL+ G
Sbjct: 780 DLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGI 839
Query: 127 CKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNL 186
C+ ++ + +L + G++ D T+ L+ C G+ A +L M G +
Sbjct: 840 CESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDK 899
Query: 187 QTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXX 246
TC ++ L + E+ + M K I + Y +++G+C
Sbjct: 900 DTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEE 959
Query: 247 XXXXXXXFDTYTFNIMIRGL-----------------------------------CWEGL 271
+ M+R L C G
Sbjct: 960 MIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGN 1019
Query: 272 LDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTEL 331
+ EA EL + M G + SYNV + GL K D++ + + + MK GF +A T +
Sbjct: 1020 VIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKA 1079
Query: 332 LI 333
LI
Sbjct: 1080 LI 1081
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 147/353 (41%), Gaps = 36/353 (10%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G P IV+ N +I G + G+ ++ LL EM + P++ T++IL+ G+ K VS +
Sbjct: 754 GHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTS 813
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ ++ G+ P+ +T +SL+ G C + +E +K+ + RG T+N LI
Sbjct: 814 FLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISK 873
Query: 126 WCKVKDV-----------------DRAIC------------------LLGEMVNEGLKPD 150
C ++ D+ C +L EM +G+ P+
Sbjct: 874 CCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPE 933
Query: 151 VVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFR 210
+ L+ G C+VG A + M H P + ++ L KC EA L R
Sbjct: 934 SRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLR 993
Query: 211 AMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEG 270
M K + I + ++ C D ++N++I GLC +G
Sbjct: 994 FMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKG 1053
Query: 271 LLDEAEELLMRMEENGCPPNRCSYNVFVHGLL-RKLDISRSEKYLQIMKCKGF 322
+ A EL M+ +G N +Y + GLL R+ S ++ L+ + +GF
Sbjct: 1054 DMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGF 1106
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 111/266 (41%), Gaps = 4/266 (1%)
Query: 57 GKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSV 116
GK V GA +M P+V Y+ LI Y +++++++F LM G PSV
Sbjct: 143 GKSSFVFGA--LMTTYRLCNSNPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSV 198
Query: 117 VTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFT 176
T N+++ K + L EM+ + PDV T+ L+ C G + L
Sbjct: 199 YTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQK 258
Query: 177 MKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXX 236
M++ G P + T +L K A+ L M+ +D D+ YN+++ +C
Sbjct: 259 MEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNR 318
Query: 237 XXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNV 296
+ T+N +I G EG + A +LL M G PN ++N
Sbjct: 319 IAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNA 378
Query: 297 FVHGLLRKLDISRSEKYLQIMKCKGF 322
+ G + + + + K +M+ KG
Sbjct: 379 LIDGHISEGNFKEALKMFYMMEAKGL 404
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 98/195 (50%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
S GI + + ++ L + R++E +L+EM ++G+ P+ + + L++G + G +
Sbjct: 891 TSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDI 950
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
A V M+ + P V ++++ + +EA + M++ +P++ ++ +L
Sbjct: 951 KTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTL 1010
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
+H CK +V A+ L M N GLK D+V++ L+ G C G A EL+ MK G
Sbjct: 1011 MHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGF 1070
Query: 183 VPNLQTCTVILDGLF 197
+ N T ++ GL
Sbjct: 1071 LANATTYKALIRGLL 1085
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%)
Query: 255 DTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYL 314
D TFNI+I LC EG +++ L+ +ME++G P +YN +H +K + + L
Sbjct: 232 DVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELL 291
Query: 315 QIMKCKGFPVDANTTELLI 333
MK KG D T +LI
Sbjct: 292 DHMKSKGVDADVCTYNMLI 310
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 168/338 (49%), Gaps = 6/338 (1%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G + V Y+ I G FK G + EM++KG+ DV ++SIL+DG KEG V
Sbjct: 236 EGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEE 295
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A ++G M+ GVEPN++TY ++I G C ++EEA +F+ ++ G Y +LI
Sbjct: 296 ALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLID 355
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G C+ +++RA +LG+M G++P ++T+ ++ G C G+ A E+ G V
Sbjct: 356 GICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----SKGVVG 410
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
++ T + +LD K + + + R ++ I +D+V+ N++L
Sbjct: 411 DVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALY 470
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
DT T+ MI+G C G ++EA E+ + ++ C YN + L +K
Sbjct: 471 RAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAVC-YNRIIDALCKK 529
Query: 305 LDISRSEKYLQIMKCKGFPVDANTTELLICIYSANKGD 342
+ + + L + KG +D +T+ L+ AN GD
Sbjct: 530 GMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGD 567
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 158/388 (40%), Gaps = 77/388 (19%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGK------ 58
+GIQP+I++YN +I GL GR E + + KGV+ DV T+S L+D + K
Sbjct: 376 RGIQPSILTYNTVINGLCMAGRVSEA-----DEVSKGVVGDVITYSTLLDSYIKVQNIDA 430
Query: 59 -----------------------------EGLVSGARCVMGFMVHVGVEPNVVTYNSLIG 89
G A + M + + P+ TY ++I
Sbjct: 431 VLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIK 490
Query: 90 GYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKP 149
GYC Q+EEA+++F+ + R+ + + V YN +I CK +D A +L E+ +GL
Sbjct: 491 GYCKTGQIEEALEMFNEL-RKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYL 549
Query: 150 DVVTWTALV------GG-----------------------------FCQVGKPLAAKELF 174
D+ T L+ GG C+ G AA E++
Sbjct: 550 DIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVY 609
Query: 175 FTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXX 234
M+ G + T++ + R + + A E + +D++ Y ++++G+C
Sbjct: 610 MIMRRKGLTVTFPS-TILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKE 668
Query: 235 XXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSY 294
+T T+N +I GLC +G L EA L +E G P+ +Y
Sbjct: 669 GFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTY 728
Query: 295 NVFVHGLLRKLDISRSEKYLQIMKCKGF 322
+ + L ++ +EK L M KG
Sbjct: 729 GILIDNLCKEGLFLDAEKLLDSMVSKGL 756
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 91/174 (52%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
S+G+ ++YN LI GL + G E L + G++P T+ IL+D KEGL
Sbjct: 683 SRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFL 742
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A ++ MV G+ PN++ YNS++ GYC Q E+AM+V + P T +S+I
Sbjct: 743 DAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMI 802
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTM 177
G+CK D++ A+ + E ++ + D + L+ GFC G+ A+ L M
Sbjct: 803 KGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREM 856
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 103/189 (54%), Gaps = 2/189 (1%)
Query: 45 DVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVF 104
DV ++I+++G KEG + A + F GV N +TYNSLI G C + + EA+++F
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 713
Query: 105 DLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQV 164
D + G +PS VTY LI CK A LL MV++GL P+++ + ++V G+C++
Sbjct: 714 DSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKL 773
Query: 165 GKPLAAKELFFTMKEHGQV-PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVV 223
G+ A + + K G+V P+ T + ++ G K EA+S+F + +I D
Sbjct: 774 GQTEDAMRV-VSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFG 832
Query: 224 YNVMLDGMC 232
+ ++ G C
Sbjct: 833 FLFLIKGFC 841
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 120/276 (43%), Gaps = 3/276 (1%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTF--SILVDGFGKEGLVS 63
G P+ +++ LI + G +L M K V F S ++ GF K G
Sbjct: 129 GAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPE 188
Query: 64 GARCVMGFMVHVGV-EPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
A V GV PN+VTY +L+ C +++E + + G V Y++
Sbjct: 189 LALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNW 248
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
IHG+ K + A+ EMV +G+ DVV+++ L+ G + G A L M + G
Sbjct: 249 IHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGV 308
Query: 183 VPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXX 242
PNL T T I+ GL K EA LF + I++D +Y ++DG+C
Sbjct: 309 EPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFS 368
Query: 243 XXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEEL 278
T+N +I GLC G + EA+E+
Sbjct: 369 MLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV 404
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 133/303 (43%), Gaps = 6/303 (1%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
G PT+ S + ++ L++ ++ ++ K + + + +SI+ F
Sbjct: 20 SGFSPTLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQININHRIYSIVSWAFLNLNRYED 79
Query: 65 ARCVMGFMVH-VGVEPNVVTYNSLIGGYCL-RHQMEEAMKVF-DLMVRRGCLPSVVTYNS 121
A + + + P +SLI G+ + R + + + D + G PS +T+ S
Sbjct: 80 AEKFINIHISKASIFPRTHMLDSLIHGFSITRDDPSKGLLILRDCLRNHGAFPSSLTFCS 139
Query: 122 LIHGWCKVKDVDRAICLLGEMVNEGLKP--DVVTWTALVGGFCQVGKPLAAKELFFTMKE 179
LI+ + + ++D AI +L M N+ + D +A++ GFC++GKP A F + +
Sbjct: 140 LIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVD 199
Query: 180 HG-QVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXX 238
G VPNL T T ++ L + E L R +E + D V Y+ + G
Sbjct: 200 SGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALV 259
Query: 239 XXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFV 298
D +++I+I GL EG ++EA LL +M + G PN +Y +
Sbjct: 260 DALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAII 319
Query: 299 HGL 301
GL
Sbjct: 320 RGL 322
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 100/206 (48%)
Query: 11 IVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMG 70
++ Y +I GL K G + L +GV + T++ L++G ++G + A +
Sbjct: 655 VIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFD 714
Query: 71 FMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVK 130
+ ++G+ P+ VTY LI C +A K+ D MV +G +P+++ YNS++ G+CK+
Sbjct: 715 SLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLG 774
Query: 131 DVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCT 190
+ A+ ++ + + PD T ++++ G+C+ G A +F K+ +
Sbjct: 775 QTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFL 834
Query: 191 VILDGLFKCRFHSEAMSLFRAMEKSD 216
++ G EA L R M S+
Sbjct: 835 FLIKGFCTKGRMEEARGLLREMLVSE 860
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 134/330 (40%), Gaps = 40/330 (12%)
Query: 12 VSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGF 71
V YN +I L K G +L E+ +KG+ D+ T L+ G G + ++G
Sbjct: 517 VCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANG---GDKGILGL 573
Query: 72 ---MVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRG---CLPS---------- 115
+ + + + N I C R E A++V+ +M R+G PS
Sbjct: 574 VYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNL 633
Query: 116 ---------------------VVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTW 154
V+ Y +I+G CK + +A+ L + G+ + +T+
Sbjct: 634 RSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITY 693
Query: 155 TALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEK 214
+L+ G CQ G + A LF +++ G VP+ T +++D L K +A L +M
Sbjct: 694 NSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVS 753
Query: 215 SDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDE 274
+ +I++YN ++DG C D +T + MI+G C +G ++E
Sbjct: 754 KGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEE 813
Query: 275 AEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
A + ++ + + + G K
Sbjct: 814 ALSVFTEFKDKNISADFFGFLFLIKGFCTK 843
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 89/203 (43%)
Query: 80 NVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLL 139
+V+ Y +I G C + +A+ + RG + +TYNSLI+G C+ + A+ L
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 713
Query: 140 GEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKC 199
+ N GL P VT+ L+ C+ G L A++L +M G VPN+ I+DG K
Sbjct: 714 DSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKL 773
Query: 200 RFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTF 259
+AM + + D + M+ G C D + F
Sbjct: 774 GQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGF 833
Query: 260 NIMIRGLCWEGLLDEAEELLMRM 282
+I+G C +G ++EA LL M
Sbjct: 834 LFLIKGFCTKGRMEEARGLLREM 856
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 81/176 (46%), Gaps = 5/176 (2%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
S GI+ Y LI G+ + G +L +M Q+G+ P + T++ +++G G VS
Sbjct: 340 SVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVS 399
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A V GV +V+TY++L+ Y ++ +++ + +V N L+
Sbjct: 400 EAD-----EVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILL 454
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKE 179
+ + A L M L PD T+ ++ G+C+ G+ A E+F +++
Sbjct: 455 KAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRK 510
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 155/311 (49%), Gaps = 2/311 (0%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+ +QPT+VS+N LI G K G EG L ++M + PDV T+S L++ KE + G
Sbjct: 269 RSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDG 328
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A + M G+ PN V + +LI G+ +++ + + M+ +G P +V YN+L++
Sbjct: 329 AHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVN 388
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G+CK D+ A ++ M+ GL+PD +T+T L+ GFC+ G A E+ M ++G
Sbjct: 389 GFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIEL 448
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
+ + ++ G+ K +A R M ++ I D V Y +M+D C
Sbjct: 449 DRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLL 508
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
T+N+++ GLC G + A+ LL M G P+ +YN + G R
Sbjct: 509 KEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRH 568
Query: 305 LDISRSEKYLQ 315
+ S++Y+Q
Sbjct: 569 AN--SSKRYIQ 577
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 159/337 (47%), Gaps = 35/337 (10%)
Query: 32 GLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGY 91
G E++ G +V F+IL++ F KEG +S A+ V + ++P VV++N+LI GY
Sbjct: 226 GFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGY 285
Query: 92 C----------LRHQMEE-------------------------AMKVFDLMVRRGCLPSV 116
C L+HQME+ A +FD M +RG +P+
Sbjct: 286 CKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPND 345
Query: 117 VTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFT 176
V + +LIHG + ++D +M+++GL+PD+V + LV GFC+ G +AA+ +
Sbjct: 346 VIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDG 405
Query: 177 MKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXX 236
M G P+ T T ++DG + A+ + + M+++ I+LD V ++ ++ GMC
Sbjct: 406 MIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGR 465
Query: 237 XXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNV 296
D T+ +M+ C +G +LL M+ +G P+ +YNV
Sbjct: 466 VIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNV 525
Query: 297 FVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLI 333
++GL + + ++ L M G D T L+
Sbjct: 526 LLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLL 562
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 118/228 (51%), Gaps = 7/228 (3%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
SKG+QP IV YN L+ G K G ++ M+++G+ PD T++ L+DGF + G V
Sbjct: 373 SKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVE 432
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A + M G+E + V +++L+ G C ++ +A + M+R G P VTY ++
Sbjct: 433 TALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMM 492
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
+CK D LL EM ++G P VVT+ L+ G C++G+ A L M G V
Sbjct: 493 DAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVV 552
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDL--DIVVYNVMLD 229
P+ T +L+G H A S R ++K +I + D+ Y +++
Sbjct: 553 PDDITYNTLLEG-----HHRHANSSKRYIQKPEIGIVADLASYKSIVN 595
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 85/164 (51%), Gaps = 3/164 (1%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
+ GI+ V ++ L+ G+ K GR + L EM++ G+ PD T+++++D F K+G
Sbjct: 442 DQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDA 501
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
++ M G P+VVTYN L+ G C QM+ A + D M+ G +P +TYN+L
Sbjct: 502 QTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTL 561
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGK 166
+ G + + + E+ G+ D+ ++ ++V + K
Sbjct: 562 LEGHHRHANSSKRYIQKPEI---GIVADLASYKSIVNELDRASK 602
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 165/367 (44%), Gaps = 20/367 (5%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G P +Y+ ++ L + + L EM + G++ DV T++I+VD F K GL+
Sbjct: 477 QGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQ 536
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
AR M VG PNVVTY +LI Y ++ A ++F+ M+ GCLP++VTY++LI
Sbjct: 537 ARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALID 596
Query: 125 GWCKVKDVDRAICLLGEMV----------------NEGLKPDVVTWTALVGGFCQVGKPL 168
G CK V++A + M + +P+VVT+ AL+ GFC+ +
Sbjct: 597 GHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVE 656
Query: 169 AAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVML 228
A++L M G PN ++DGL K EA + M + + Y+ ++
Sbjct: 657 EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 716
Query: 229 DGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCP 288
D + + MI GLC G DEA +L+ MEE GC
Sbjct: 717 DRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQ 776
Query: 289 PNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLI---CIYSA-NKGDNA 344
PN +Y + G I + L+ M KG + T +LI C A + N
Sbjct: 777 PNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNL 836
Query: 345 FQELQQN 351
+E++Q
Sbjct: 837 LEEMKQT 843
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 132/312 (42%), Gaps = 9/312 (2%)
Query: 16 CLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHV 75
C L K G+W+E L+ + +PD ++ L+ G + L A + M
Sbjct: 275 CFAYSLCKVGKWREALTLV---ETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRAT 331
Query: 76 GVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRA 135
PNVVTY++L+ G + Q+ +V ++M+ GC PS +NSL+H +C D A
Sbjct: 332 SCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYA 391
Query: 136 ICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLA------AKELFFTMKEHGQVPNLQTC 189
LL +MV G P V + L+G C L A++ + M G V N
Sbjct: 392 YKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINV 451
Query: 190 TVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXX 249
+ L + +A S+ R M D Y+ +L+ +C
Sbjct: 452 SSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKR 511
Query: 250 XXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISR 309
D YT+ IM+ C GL+++A + M E GC PN +Y +H L+ +S
Sbjct: 512 GGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSY 571
Query: 310 SEKYLQIMKCKG 321
+ + + M +G
Sbjct: 572 ANELFETMLSEG 583
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 161/367 (43%), Gaps = 31/367 (8%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQ---------------- 47
S+G P IV+Y+ LI G K G+ ++ + M +PDV
Sbjct: 581 SEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVV 640
Query: 48 TFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLM 107
T+ L+DGF K V AR ++ M G EPN + Y++LI G C +++EA +V M
Sbjct: 641 TYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM 700
Query: 108 VRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKP 167
G ++ TY+SLI + KVK D A +L +M+ P+VV +T ++ G C+VGK
Sbjct: 701 SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT 760
Query: 168 LAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVM 227
A +L M+E G PN+ T T ++DG + L M + + V Y V+
Sbjct: 761 DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVL 820
Query: 228 LDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWE-----GLLDEAEELLMRM 282
+D C T + +I G E GLLDE +
Sbjct: 821 IDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDE-------I 873
Query: 283 EENGCPPNRCSYNVFVHGLLRKLDISRSEKYL-QIMKCKGFPVDANTT--ELLICIYSAN 339
++ P Y + + L++ + + + L ++ VD ++T L+ + AN
Sbjct: 874 GQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLAN 933
Query: 340 KGDNAFQ 346
K + AFQ
Sbjct: 934 KVETAFQ 940
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 137/338 (40%), Gaps = 35/338 (10%)
Query: 8 QPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARC 67
+P +V+Y L+ G K R +E LL M +G P+ + L+DG K G + A+
Sbjct: 636 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 695
Query: 68 VMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWC 127
V M G + TY+SLI Y + + A KV M+ C P+VV Y +I G C
Sbjct: 696 VKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 755
Query: 128 KVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQ 187
KV D A L+ M +G +P+VVT+TA++ GF +GK EL M G PN
Sbjct: 756 KVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYV 815
Query: 188 TCTVILDGLFKCRFHSEAMSLFRAMEKS-------------------------------- 215
T V++D K A +L M+++
Sbjct: 816 TYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQ 875
Query: 216 -DIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTY--TFNIMIRGLCWEGLL 272
D + VY +++D + Y T+N +I LC +
Sbjct: 876 DDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKV 935
Query: 273 DEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRS 310
+ A +L M + G P S+ + GL R IS +
Sbjct: 936 ETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 973
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 144/354 (40%), Gaps = 22/354 (6%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKE----- 59
+G P+ +N L+ G LL +M++ G MP ++IL+ +
Sbjct: 366 EGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLN 425
Query: 60 -GLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVT 118
L+ A M+ GV N + +S C + E+A V M+ +G +P T
Sbjct: 426 CDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTST 485
Query: 119 YNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMK 178
Y+ +++ C ++ A L EM GL DV T+T +V FC+ G A++ F M+
Sbjct: 486 YSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMR 545
Query: 179 EHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDG-------- 230
E G PN+ T T ++ K + S A LF M +IV Y+ ++DG
Sbjct: 546 EVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVE 605
Query: 231 --------MCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRM 282
MC + T+ ++ G C ++EA +LL M
Sbjct: 606 KACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAM 665
Query: 283 EENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLICIY 336
GC PN+ Y+ + GL + + +++ M GFP T LI Y
Sbjct: 666 SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRY 719
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 145/331 (43%), Gaps = 17/331 (5%)
Query: 36 EMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRH 95
EM+ GV+ + S G A V+ M+ G P+ TY+ ++ C
Sbjct: 438 EMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNAS 497
Query: 96 QMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWT 155
+ME A +F+ M R G + V TY ++ +CK +++A EM G P+VVT+T
Sbjct: 498 KMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYT 557
Query: 156 ALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAM--- 212
AL+ + + K A ELF TM G +PN+ T + ++DG K +A +F M
Sbjct: 558 ALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGS 617
Query: 213 -EKSDIDL------------DIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTF 259
+ D+D+ ++V Y +LDG C + +
Sbjct: 618 KDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVY 677
Query: 260 NIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYL-QIMK 318
+ +I GLC G LDEA+E+ M E+G P +Y+ + + + K L ++++
Sbjct: 678 DALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLE 737
Query: 319 CKGFPVDANTTELLICIYSANKGDNAFQELQ 349
P TE++ + K D A++ +Q
Sbjct: 738 NSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQ 768
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 4/219 (1%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
M KG QP +V+Y +I G G+ + LL M KGV P+ T+ +L+D K G
Sbjct: 769 MMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNG 828
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
+ A ++ M + Y +I G+ + E++ + D + + P + Y
Sbjct: 829 ALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYR 886
Query: 121 SLIHGWCKVKDVDRAICLLGEMV--NEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMK 178
LI K + ++ A+ LL E+ + L T+ +L+ C K A +LF M
Sbjct: 887 LLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMT 946
Query: 179 EHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDI 217
+ G +P +Q+ ++ GLF+ SEA+ L + +I
Sbjct: 947 KKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMEI 985
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 165/385 (42%), Gaps = 48/385 (12%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
+ G+ P +Y LI+G + ++G LL EM ++ ++ T+ +V G G +
Sbjct: 375 ASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLD 434
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
GA ++ M+ G PNVV Y +LI + + +AM+V M +G P + YNSLI
Sbjct: 435 GAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLI 494
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGG----------------------- 160
G K K +D A L EMV GLKP+ T+ A + G
Sbjct: 495 IGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVL 554
Query: 161 ------------FCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSL 208
+C+ GK + A + +M + G + + +T TV+++GLFK +A +
Sbjct: 555 PNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEI 614
Query: 209 FRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCW 268
FR M I D+ Y V+++G + +N+++ G C
Sbjct: 615 FREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCR 674
Query: 269 EGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDA-- 326
G +++A+ELL M G PN +Y + G + D++ + + MK KG D+
Sbjct: 675 SGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFV 734
Query: 327 -----------NTTELLICIYSANK 340
N E I I+ NK
Sbjct: 735 YTTLVDGCCRLNDVERAITIFGTNK 759
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 143/302 (47%), Gaps = 44/302 (14%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+GI +Y L+ GLFK + + + EM KG+ PDV ++ +L++GF K G +
Sbjct: 586 QGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQK 645
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A + MV G+ PNV+ YN L+GG+C ++E+A ++ D M +G P+ VTY ++I
Sbjct: 646 ASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIID 705
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G+CK D+ A L EM +GL PD +T LV G C++ A +F T K+ G
Sbjct: 706 GYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK-GCAS 764
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
+ +++ +FK +L V N ++DG
Sbjct: 765 STAPFNALINWVFKF---------------GKTELKTEVLNRLMDG-------------- 795
Query: 245 XXXXXXXXXFDTY------TFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFV 298
FD + T+NIMI LC EG L+ A+EL +M+ P +Y +
Sbjct: 796 --------SFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLL 847
Query: 299 HG 300
+G
Sbjct: 848 NG 849
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 154/368 (41%), Gaps = 41/368 (11%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+GI P I YN LI GL K R E L EM++ G+ P+ T+ + G+ + +
Sbjct: 481 QGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFAS 540
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCL----------- 113
A + M GV PN V LI YC + ++ EA + MV +G L
Sbjct: 541 ADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMN 600
Query: 114 ------------------------PSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKP 149
P V +Y LI+G+ K+ ++ +A + EMV EGL P
Sbjct: 601 GLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTP 660
Query: 150 DVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLF 209
+V+ + L+GGFC+ G+ AKEL M G PN T I+DG K +EA LF
Sbjct: 661 NVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLF 720
Query: 210 RAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWE 269
M+ + D VY ++DG C T FN +I +
Sbjct: 721 DEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCAS-STAPFNALINWVFKF 779
Query: 270 GLLDEAEELLMRMEENGC----PPNRCSYNVFVHGLLRKLDI-SRSEKYLQIMKCKGFPV 324
G + E+L R+ + PN +YN+ + L ++ ++ + E + Q+ P
Sbjct: 780 GKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPT 839
Query: 325 DANTTELL 332
T LL
Sbjct: 840 VITYTSLL 847
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 136/320 (42%), Gaps = 36/320 (11%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KG+ P +Y+ LI GL K R ++ LL EM GV D T+S+L+DG K
Sbjct: 271 KGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADA 330
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A+ ++ MV G+ Y+ I ME+A +FD M+ G +P Y SLI
Sbjct: 331 AKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIE 390
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G+C+ K+V + LL EM + T+ +V G C G A + M G P
Sbjct: 391 GYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRP 450
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
N+ T ++ + +AM + + M++ I DI YN
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNS------------------ 492
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
+I GL +DEA L+ M ENG PN +Y F+ G +
Sbjct: 493 -----------------LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEA 535
Query: 305 LDISRSEKYLQIMK-CKGFP 323
+ + ++KY++ M+ C P
Sbjct: 536 SEFASADKYVKEMRECGVLP 555
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 143/339 (42%), Gaps = 19/339 (5%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCV 68
P + L+ L ++ R + M+++ V+ DV+T+ +L+ + G V + V
Sbjct: 184 PRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDV 243
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
+ E T N ++ A+K+ + M+ +G +P TY+ LI G CK
Sbjct: 244 L---FKTEKEFRTATLN-----------VDGALKLKESMICKGLVPLKYTYDVLIDGLCK 289
Query: 129 VKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHG--QVPNL 186
+K ++ A LL EM + G+ D T++ L+ G + AAK L M HG P +
Sbjct: 290 IKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYM 349
Query: 187 QTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXX 246
C + + + K +A +LF M S + Y +++G C
Sbjct: 350 YDCCICV--MSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVE 407
Query: 247 XXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLD 306
YT+ +++G+C G LD A ++ M +GC PN Y + L+
Sbjct: 408 MKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSR 467
Query: 307 ISRSEKYLQIMKCKGFPVDAN-TTELLICIYSANKGDNA 344
+ + L+ MK +G D L+I + A + D A
Sbjct: 468 FGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEA 506
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 99/201 (49%), Gaps = 9/201 (4%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGV----MPDVQTFSILVDGFGK 58
N KG + +N LI +FKFG+ + +L +M P+ T++I++D K
Sbjct: 758 NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCK 817
Query: 59 EGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVT 118
EG + A+ + M + + P V+TY SL+ GY + E VFD + G P +
Sbjct: 818 EGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIM 877
Query: 119 YNSLIHGWCKVKDVDRAICLLGEM-----VNEGLKPDVVTWTALVGGFCQVGKPLAAKEL 173
Y+ +I+ + K +A+ L+ +M V++G K + T AL+ GF +VG+ A+++
Sbjct: 878 YSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKV 937
Query: 174 FFTMKEHGQVPNLQTCTVILD 194
M +P+ T +++
Sbjct: 938 MENMVRLQYIPDSATVIELIN 958
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 110/247 (44%), Gaps = 40/247 (16%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G+ P ++ YN L+ G + G ++ LL EM KG+ P+ T+ ++DG+ K G ++
Sbjct: 656 EGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAE 715
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCL----------- 113
A + M G+ P+ Y +L+ G C + +E A+ +F ++GC
Sbjct: 716 AFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALIN 774
Query: 114 ----------------------------PSVVTYNSLIHGWCKVKDVDRAICLLGEMVNE 145
P+ VTYN +I CK +++ A L +M N
Sbjct: 775 WVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNA 834
Query: 146 GLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEA 205
L P V+T+T+L+ G+ ++G+ +F G P+ +VI++ K ++A
Sbjct: 835 NLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKA 894
Query: 206 MSLFRAM 212
+ L M
Sbjct: 895 LVLVDQM 901
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 97/238 (40%), Gaps = 45/238 (18%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDG--------- 55
KG+ P V+Y +I G K G E L EM KG++PD ++ LVDG
Sbjct: 691 KGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVER 750
Query: 56 ----------------------------FGKEGLVSGA--RCVMGFMVHVGVEPNVVTYN 85
FGK L + R + G G +PN VTYN
Sbjct: 751 AITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG-KPNDVTYN 809
Query: 86 SLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNE 145
+I C +E A ++F M +P+V+TY SL++G+ K+ + E +
Sbjct: 810 IMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAA 869
Query: 146 GLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN-----LQTCTVILDGLFK 198
G++PD + ++ ++ F + G A L M V + + TC +L G K
Sbjct: 870 GIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAK 927
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 5/160 (3%)
Query: 8 QPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARC 67
+P V+YN +I L K G + L ++M +MP V T++ L++G+ K G +
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFP 861
Query: 68 VMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLM-----VRRGCLPSVVTYNSL 122
V + G+EP+ + Y+ +I + +A+ + D M V GC S+ T +L
Sbjct: 862 VFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRAL 921
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFC 162
+ G+ KV +++ A ++ MV PD T L+ C
Sbjct: 922 LSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 69/132 (52%), Gaps = 6/132 (4%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
M+N+ + PT+++Y L+ G K GR E + E + G+ PD +S++++ F KEG
Sbjct: 831 MQNA-NLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEG 889
Query: 61 LVSGARCVMGFM-----VHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPS 115
+ + A ++ M V G + ++ T +L+ G+ +ME A KV + MVR +P
Sbjct: 890 MTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPD 949
Query: 116 VVTYNSLIHGWC 127
T LI+ C
Sbjct: 950 SATVIELINESC 961
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 168/364 (46%), Gaps = 35/364 (9%)
Query: 7 IQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFG--------- 57
I+P+++++N L++GLFK G ++ +L EM G +PD TFSIL DG+
Sbjct: 280 IEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAAL 339
Query: 58 --------------------------KEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGY 91
KEG + A ++G + G+ PN V YN++I GY
Sbjct: 340 GVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGY 399
Query: 92 CLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDV 151
C + + A + M ++G P + YN LI +C++ +++ A + +M +G+ P V
Sbjct: 400 CRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSV 459
Query: 152 VTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRA 211
T+ L+GG+ + + ++ M+++G +PN+ + +++ L K EA + R
Sbjct: 460 ETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRD 519
Query: 212 MEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGL 271
ME + + +YN+++DG C + T+N +I GL G
Sbjct: 520 MEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGK 579
Query: 272 LDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTEL 331
L EAE+LL+ + G P+ +YN + G ++ R + MK G T L
Sbjct: 580 LSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHL 639
Query: 332 LICI 335
LI +
Sbjct: 640 LISL 643
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 147/315 (46%), Gaps = 2/315 (0%)
Query: 8 QPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARC 67
+P+ Y IQ K +G L M + P V +++L+DG K ++ A
Sbjct: 176 RPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQ 235
Query: 68 VMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWC 127
+ M+ + P+++TYN+LI GYC E++ KV + M PS++T+N+L+ G
Sbjct: 236 LFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLF 295
Query: 128 KVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQ 187
K V+ A +L EM + G PD T++ L G+ K AA ++ T + G N
Sbjct: 296 KAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAY 355
Query: 188 TCTVILDGLFK-CRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXX 246
TC+++L+ L K + L R M K + + V+YN M+DG C
Sbjct: 356 TCSILLNALCKEGKIEKAEEILGREMAKGLVP-NEVIYNTMIDGYCRKGDLVGARMKIEA 414
Query: 247 XXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLD 306
D +N +IR C G ++ AE+ + +M+ G P+ +YN+ + G RK +
Sbjct: 415 MEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYE 474
Query: 307 ISRSEKYLQIMKCKG 321
+ L+ M+ G
Sbjct: 475 FDKCFDILKEMEDNG 489
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 146/322 (45%), Gaps = 6/322 (1%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KG+ P++ +YN LI G + + + +L EM G MP+V ++ L++ K +
Sbjct: 453 KGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLE 512
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A+ V M GV P V YN LI G C + ++E+A + M+++G ++VTYN+LI
Sbjct: 513 AQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLID 572
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G + A LL E+ +GLKPDV T+ +L+ G+ G L+ MK G P
Sbjct: 573 GLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKP 632
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLF-RAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXX 243
L+T +++ K E + L R + + D++VYN +L
Sbjct: 633 TLKTYHLLISLCTK-----EGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNL 687
Query: 244 XXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLR 303
D T+N +I G G L E L+ M P +YN+ V G
Sbjct: 688 QKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCE 747
Query: 304 KLDISRSEKYLQIMKCKGFPVD 325
D + + + M+ KGF +D
Sbjct: 748 VKDYMSAYVWYREMQEKGFLLD 769
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 157/349 (44%), Gaps = 6/349 (1%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
MK+ + I P++ YN LI GL K R + L EM+ + ++P + T++ L+DG+ K G
Sbjct: 205 MKHDR-IYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAG 263
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
+ V M +EP+++T+N+L+ G +E+A V M G +P T++
Sbjct: 264 NPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFS 323
Query: 121 SLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEH 180
L G+ + + A+ + V+ G+K + T + L+ C+ GK A+E+
Sbjct: 324 ILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAK 383
Query: 181 GQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXX 240
G VPN ++DG + A AMEK + D + YN ++ C
Sbjct: 384 GLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENA 443
Query: 241 XXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHG 300
T+NI+I G + D+ ++L ME+NG PN SY ++
Sbjct: 444 EKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINC 503
Query: 301 LLRKLDISRSEKYLQIMKCKGFPVDANTTELLI---CIYSANKGDNAFQ 346
L + + ++ + M+ +G +LI C S K ++AF+
Sbjct: 504 LCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCC--SKGKIEDAFR 550
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 119/229 (51%), Gaps = 8/229 (3%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KGI+ +V+YN LI GL G+ E LL E+ +KG+ PDV T++ L+ G+G G V
Sbjct: 558 KGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQ- 616
Query: 65 ARCVMGF--MVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
RC+ + M G++P + TY+ LI C + +E ++F M + P ++ YN +
Sbjct: 617 -RCIALYEEMKRSGIKPTLKTYHLLIS-LCTKEGIELTERLFGEMSLK---PDLLVYNGV 671
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
+H + D+++A L +M+ + + D T+ +L+ G +VGK + L M
Sbjct: 672 LHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREM 731
Query: 183 VPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGM 231
P T +I+ G + + + A +R M++ LD+ + N ++ G+
Sbjct: 732 EPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGL 780
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 115/300 (38%), Gaps = 35/300 (11%)
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
++S A + + + G+ P+ + L+ Q + VF ++ PS Y
Sbjct: 124 MISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYG 183
Query: 121 SLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEH 180
I K+ DV + + L M ++ + P V + L+ G C+ + A++LF M
Sbjct: 184 KAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLAR 243
Query: 181 GQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXX 240
+P+L T ++DG K ++ + M+ I+ ++ +N +L G+
Sbjct: 244 RLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDA 303
Query: 241 XXXXXXXXXXXXXFDTYTFNIMIRG----------------------------------- 265
D +TF+I+ G
Sbjct: 304 ENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNA 363
Query: 266 LCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVD 325
LC EG +++AEE+L R G PN YN + G RK D+ + ++ M+ +G D
Sbjct: 364 LCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPD 423
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 142/298 (47%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
S+G++P + +YN +I+G+ K G ++ + KG PDV +++IL+ +G
Sbjct: 256 SRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWE 315
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
+M M +PNVVTY+ LI C ++EEAM + LM +G P +Y+ LI
Sbjct: 316 EGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLI 375
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
+C+ +D AI L M+++G PD+V + ++ C+ GK A E+F + E G
Sbjct: 376 AAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCS 435
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXX 243
PN + + L+ A+ + M + ID D + YN M+ +C
Sbjct: 436 PNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFEL 495
Query: 244 XXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGL 301
T+NI++ G C +++A +L M NGC PN +Y V + G+
Sbjct: 496 LVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 155/330 (46%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
S QPT+++Y LI+ G E L+ EM+ +G+ PD+ T++ ++ G KEG+V
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 280
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A ++ + G EP+V++YN L+ + + EE K+ M C P+VVTY+ LI
Sbjct: 281 RAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILI 340
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
C+ ++ A+ LL M +GL PD ++ L+ FC+ G+ A E TM G +
Sbjct: 341 TTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCL 400
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXX 243
P++ +L L K +A+ +F + + + YN M +
Sbjct: 401 PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHM 460
Query: 244 XXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLR 303
D T+N MI LC EG++DEA ELL+ M P+ +YN+ + G +
Sbjct: 461 ILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCK 520
Query: 304 KLDISRSEKYLQIMKCKGFPVDANTTELLI 333
I + L+ M G + T +LI
Sbjct: 521 AHRIEDAINVLESMVGNGCRPNETTYTVLI 550
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 154/342 (45%), Gaps = 1/342 (0%)
Query: 8 QPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARC 67
QP + +YN LI G K R + +L M K PD T++I++ G + A
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 68 VMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWC 127
V+ ++ +P V+TY LI L ++EA+K+ D M+ RG P + TYN++I G C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 128 KVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQ 187
K VDRA ++ + +G +PDV+++ L+ GK ++L M PN+
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 188 TCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXX 247
T ++++ L + EAM+L + M++ + D Y+ ++ C
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 248 XXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDI 307
D +N ++ LC G D+A E+ ++ E GC PN SYN L D
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 454
Query: 308 SRSEKYLQIMKCKGFPVDANTTELLI-CIYSANKGDNAFQEL 348
R+ + M G D T +I C+ D AF+ L
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELL 496
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 142/297 (47%), Gaps = 1/297 (0%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KG P ++ LI+G F + ++ E+++K PDV ++ L++GF K +
Sbjct: 118 KGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDVFAYNALINGFCKMNRIDD 176
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A V+ M P+ VTYN +IG C R +++ A+KV + ++ C P+V+TY LI
Sbjct: 177 ATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIE 236
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
VD A+ L+ EM++ GLKPD+ T+ ++ G C+ G A E+ ++ G P
Sbjct: 237 ATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEP 296
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
++ + ++L L E L M D ++V Y++++ +C
Sbjct: 297 DVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLL 356
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGL 301
D Y+++ +I C EG LD A E L M +GC P+ +YN + L
Sbjct: 357 KLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATL 413
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 130/274 (47%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KG +P ++SYN L++ L G+W+EG L+ +M + P+V T+SIL+ ++G +
Sbjct: 292 KGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEE 351
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A ++ M G+ P+ +Y+ LI +C +++ A++ + M+ GCLP +V YN+++
Sbjct: 352 AMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLA 411
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
CK D+A+ + G++ G P+ ++ + G + A + M +G P
Sbjct: 412 TLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDP 471
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
+ T ++ L + EA L M + +V YN++L G C
Sbjct: 472 DEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVL 531
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEEL 278
+ T+ ++I G+ + G EA EL
Sbjct: 532 ESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 152/325 (46%), Gaps = 2/325 (0%)
Query: 23 KFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVV 82
+ G + E LL M++KG PDV + L+ GF + A VM + G +P+V
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVF 159
Query: 83 TYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEM 142
YN+LI G+C +++++A +V D M + P VTYN +I C +D A+ +L ++
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 143 VNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFH 202
+++ +P V+T+T L+ G A +L M G P++ T I+ G+ K
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279
Query: 203 SEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIM 262
A + R +E + D++ YN++L + + T++I+
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339
Query: 263 IRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKG- 321
I LC +G ++EA LL M+E G P+ SY+ + R+ + + ++L+ M G
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 399
Query: 322 FPVDANTTELLICIYSANKGDNAFQ 346
P N +L + K D A +
Sbjct: 400 LPDIVNYNTVLATLCKNGKADQALE 424
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 116/248 (46%), Gaps = 35/248 (14%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
S+ P +V+Y+ LI L + G+ +E LL M +KG+ PD ++ L+ F +EG +
Sbjct: 326 SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD 385
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSV------- 116
A + M+ G P++V YN+++ C + ++A+++F + GC P+
Sbjct: 386 VAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMF 445
Query: 117 ----------------------------VTYNSLIHGWCKVKDVDRAICLLGEMVNEGLK 148
+TYNS+I C+ VD A LL +M +
Sbjct: 446 SALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFH 505
Query: 149 PDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSL 208
P VVT+ ++ GFC+ + A + +M +G PN T TV+++G+ + +EAM L
Sbjct: 506 PSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565
Query: 209 FRAMEKSD 216
+ + D
Sbjct: 566 ANDLVRID 573
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%), Gaps = 1/172 (0%)
Query: 162 CQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDI 221
C+ G + + L TM G P++ CT ++ G F R +A+ + +EK D+
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 222 VVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMR 281
YN +++G C DT T+NIMI LC G LD A ++L +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 282 MEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLI 333
+ + C P +Y + + + + + + K + M +G D T +I
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTII 270
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 163/331 (49%), Gaps = 2/331 (0%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGA-GLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
SKG +I + N LI L + G W E A G+ E+ + GV +V T +I+V+ K+G +
Sbjct: 193 SKGFTVSIDACNALIGSLVRIG-WVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKM 251
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
+ + GV P++VTYN+LI Y + MEEA ++ + M +G P V TYN++
Sbjct: 252 EKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTV 311
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
I+G CK +RA + EM+ GL PD T+ +L+ C+ G + +++F M+
Sbjct: 312 INGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDV 371
Query: 183 VPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXX 242
VP+L + ++ + +A+ F +++++ + D V+Y +++ G C
Sbjct: 372 VPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMN 431
Query: 243 XXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLL 302
D T+N ++ GLC +L EA++L M E P+ + + + G
Sbjct: 432 LRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHC 491
Query: 303 RKLDISRSEKYLQIMKCKGFPVDANTTELLI 333
+ ++ + + Q MK K +D T L+
Sbjct: 492 KLGNLQNAMELFQKMKEKRIRLDVVTYNTLL 522
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 153/329 (46%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KG P + +YN +I GL K G+++ + EM++ G+ PD T+ L+ K+G V
Sbjct: 299 KGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVE 358
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
V M V P++V ++S++ + +++A+ F+ + G +P V Y LI
Sbjct: 359 TEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQ 418
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G+C+ + A+ L EM+ +G DVVT+ ++ G C+ A +LF M E P
Sbjct: 419 GYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFP 478
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
+ T T+++DG K AM LF+ M++ I LD+V YN +LDG
Sbjct: 479 DSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIW 538
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
+++I++ LC +G L EA + M P N + G R
Sbjct: 539 ADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRS 598
Query: 305 LDISRSEKYLQIMKCKGFPVDANTTELLI 333
+ S E +L+ M +GF D + LI
Sbjct: 599 GNASDGESFLEKMISEGFVPDCISYNTLI 627
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 149/307 (48%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+ + + N ++ L K G+ ++ L ++ +KGV PD+ T++ L+ + +GL+ A
Sbjct: 230 GVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEA 289
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+M M G P V TYN++I G C + E A +VF M+R G P TY SL+
Sbjct: 290 FELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLME 349
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
CK DV + +M + + PD+V +++++ F + G A F ++KE G +P+
Sbjct: 350 ACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD 409
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
T+++ G + S AM+L M + +D+V YN +L G+C
Sbjct: 410 NVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFN 469
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
D+YT I+I G C G L A EL +M+E + +YN + G +
Sbjct: 470 EMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVG 529
Query: 306 DISRSEK 312
DI +++
Sbjct: 530 DIDTAKE 536
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 161/332 (48%), Gaps = 2/332 (0%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
S+ + P +V ++ ++ + G + + + G++PD ++IL+ G+ ++G++S
Sbjct: 368 SRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMIS 427
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A + M+ G +VVTYN+++ G C R + EA K+F+ M R P T LI
Sbjct: 428 VAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILI 487
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
G CK+ ++ A+ L +M + ++ DVVT+ L+ GF +VG AKE++ M +
Sbjct: 488 DGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEIL 547
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXX 243
P + +++++ L +EA ++ M +I +++ N M+ G C
Sbjct: 548 PTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESF 607
Query: 244 XXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEEN--GCPPNRCSYNVFVHGL 301
D ++N +I G E + +A L+ +MEE G P+ +YN +HG
Sbjct: 608 LEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGF 667
Query: 302 LRKLDISRSEKYLQIMKCKGFPVDANTTELLI 333
R+ + +E L+ M +G D +T +I
Sbjct: 668 CRQNQMKEAEVVLRKMIERGVNPDRSTYTCMI 699
Score = 124 bits (311), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 144/322 (44%), Gaps = 2/322 (0%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+ P V Y LIQG + G L EM+Q+G DV T++ ++ G K ++ A
Sbjct: 405 GLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEA 464
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ M + P+ T LI G+C ++ AM++F M + VVTYN+L+ G
Sbjct: 465 DKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDG 524
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+ KV D+D A + +MV++ + P ++++ LV C G A ++ M P
Sbjct: 525 FGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPT 584
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+ C ++ G + S+ S M D + YN ++ G
Sbjct: 585 VMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVK 644
Query: 246 XXXXXXXXF--DTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLR 303
D +T+N ++ G C + + EAE +L +M E G P+R +Y ++G +
Sbjct: 645 KMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVS 704
Query: 304 KLDISRSEKYLQIMKCKGFPVD 325
+ +++ + + M +GF D
Sbjct: 705 QDNLTEAFRIHDEMLQRGFSPD 726
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 133/320 (41%)
Query: 14 YNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMV 73
++ LI+ + + +E + KG + + L+ + G V A V +
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227
Query: 74 HVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVD 133
GV NV T N ++ C +ME+ + +G P +VTYN+LI + ++
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287
Query: 134 RAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVIL 193
A L+ M +G P V T+ ++ G C+ GK AKE+F M G P+ T +L
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347
Query: 194 DGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXX 253
K E +F M D+ D+V ++ M+
Sbjct: 348 MEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI 407
Query: 254 FDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKY 313
D + I+I+G C +G++ A L M + GC + +YN +HGL ++ + ++K
Sbjct: 408 PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 467
Query: 314 LQIMKCKGFPVDANTTELLI 333
M + D+ T +LI
Sbjct: 468 FNEMTERALFPDSYTLTILI 487
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 90/184 (48%), Gaps = 2/184 (1%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
SK I PT +SY+ L+ L G E + EM+ K + P V + ++ G+ + G S
Sbjct: 543 SKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNAS 602
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRR--GCLPSVVTYNS 121
+ M+ G P+ ++YN+LI G+ M +A + M G +P V TYNS
Sbjct: 603 DGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNS 662
Query: 122 LIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHG 181
++HG+C+ + A +L +M+ G+ PD T+T ++ GF A + M + G
Sbjct: 663 ILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRG 722
Query: 182 QVPN 185
P+
Sbjct: 723 FSPD 726
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/327 (19%), Positives = 122/327 (37%), Gaps = 18/327 (5%)
Query: 10 TIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVM 69
T +S + +I L + GR + L M+++ + ++ + L F G
Sbjct: 112 TSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCG--------- 162
Query: 70 GFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKV 129
N ++ LI Y ++ EA + F L+ +G S+ N+LI ++
Sbjct: 163 ---------SNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRI 213
Query: 130 KDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTC 189
V+ A + E+ G+ +V T +V C+ GK ++E G P++ T
Sbjct: 214 GWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTY 273
Query: 190 TVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXX 249
++ EA L AM + YN +++G+C
Sbjct: 274 NTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLR 333
Query: 250 XXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISR 309
D+ T+ ++ C +G + E E++ M P+ ++ + R ++ +
Sbjct: 334 SGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDK 393
Query: 310 SEKYLQIMKCKGFPVDANTTELLICIY 336
+ Y +K G D +LI Y
Sbjct: 394 ALMYFNSVKEAGLIPDNVIYTILIQGY 420
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 158/347 (45%), Gaps = 23/347 (6%)
Query: 10 TIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVM 69
++ SYN +QGL + G++ E +L +M KG+ P + +++IL+DG K G++S A+ ++
Sbjct: 325 SLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIV 384
Query: 70 GFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKV 129
G M GV P+ VTY L+ GYC +++ A + M+R CLP+ T N L+H K+
Sbjct: 385 GLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKM 444
Query: 130 KDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ------- 182
+ A LL +M +G D VT +V G C G+ A E+ M+ HG
Sbjct: 445 GRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLG 504
Query: 183 ----------------VPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNV 226
+P+L T + +L+GL K +EA +LF M + D V YN+
Sbjct: 505 NSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNI 564
Query: 227 MLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENG 286
+ C T+N +I GL + + E L+ M+E G
Sbjct: 565 FIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKG 624
Query: 287 CPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLI 333
PN C+YN + L + + L M K + + + LI
Sbjct: 625 ISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLI 671
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 165/365 (45%), Gaps = 39/365 (10%)
Query: 8 QPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARC 67
+P++ YN L++ K R + + L +M+ G+ P TF++L+ V AR
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 68 VMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWC 127
+ M G +PN T+ L+ GYC ++ +++ + M G LP+ V YN+++ +C
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 128 KVKDVDRAICLLGEMVNEGLKPDVVTWTA------------------------------- 156
+ D + ++ +M EGL PD+VT+ +
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288
Query: 157 --------LVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSL 208
++ GFC+VG AK LF +++E+ + +LQ+ + L GL + EA ++
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348
Query: 209 FRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCW 268
+ M I I YN+++DG+C D T+ ++ G C
Sbjct: 349 LKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCS 408
Query: 269 EGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANT 328
G +D A+ LL M N C PN + N+ +H L + IS +E+ L+ M KG+ +D T
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVT 468
Query: 329 TELLI 333
+++
Sbjct: 469 CNIIV 473
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 165/380 (43%), Gaps = 62/380 (16%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
S G+ P V YN ++ + GR + ++ +M ++G++PD+ TF+ + KEG V
Sbjct: 210 SFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVL 269
Query: 64 GARCVMGFM---VHVGV-EPNVVTYNSLIGGYC--------------------------- 92
A + M ++G+ PN +TYN ++ G+C
Sbjct: 270 DASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSY 329
Query: 93 -------LRH-QMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVN 144
+RH + EA V M +G PS+ +YN L+ G CK+ + A ++G M
Sbjct: 330 NIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKR 389
Query: 145 EGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSE 204
G+ PD VT+ L+ G+C VGK AAK L M + +PN TC ++L L+K SE
Sbjct: 390 NGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISE 449
Query: 205 AMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXF---------- 254
A L R M + LD V N+++DG+C
Sbjct: 450 AEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIG 509
Query: 255 -------------DTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGL 301
D T++ ++ GLC G EA+ L M P+ +YN+F+H
Sbjct: 510 LVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHF 569
Query: 302 LRKLDISRSEKYLQIMKCKG 321
++ IS + + L+ M+ KG
Sbjct: 570 CKQGKISSAFRVLKDMEKKG 589
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 153/354 (43%), Gaps = 30/354 (8%)
Query: 8 QPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARC 67
+P ++YN +++G K G ++ L + + + +Q+++I + G + G A
Sbjct: 288 RPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAET 347
Query: 68 VMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWC 127
V+ M G+ P++ +YN L+ G C + +A + LM R G P VTY L+HG+C
Sbjct: 348 VLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYC 407
Query: 128 KVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQ 187
V VD A LL EM+ P+ T L+ ++G+ A+EL M E G +
Sbjct: 408 SVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTV 467
Query: 188 TCTVILDGLFKCRFHSEAMSLFRAME-----------KSDIDL------------DIVVY 224
TC +I+DGL +A+ + + M S I L D++ Y
Sbjct: 468 TCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITY 527
Query: 225 NVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEE 284
+ +L+G+C D+ +NI I C +G + A +L ME+
Sbjct: 528 STLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEK 587
Query: 285 NGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLICIYSA 338
GC + +YN + GL K I + MK KG + IC Y+
Sbjct: 588 KGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPN-------ICTYNT 634
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 130/277 (46%), Gaps = 3/277 (1%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCV 68
P +++Y+ L+ GL K GR+ E L EMM + + PD ++I + F K+G +S A V
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRV 581
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
+ M G ++ TYNSLI G +++Q+ E + D M +G P++ TYN+ I C+
Sbjct: 582 LKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCE 641
Query: 129 VKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEH-GQVPNLQ 187
+ V+ A LL EM+ + + P+V ++ L+ FC+V A+E+F T GQ L
Sbjct: 642 GEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLY 701
Query: 188 TCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXX 247
+++ + L +A L A+ +L +Y +++ +C
Sbjct: 702 --SLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKM 759
Query: 248 XXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEE 284
FD +I GL G EA +M E
Sbjct: 760 IDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMME 796
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 136/334 (40%), Gaps = 23/334 (6%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KGI P+I SYN L+ GL K G + ++ M + GV PD T+ L+ G+ G V
Sbjct: 355 KGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDA 414
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A+ ++ M+ PN T N L+ ++ EA ++ M +G VT N ++
Sbjct: 415 AKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVD 474
Query: 125 GWCKVKDVDRAI-----------CLLGEMVNEGLK------------PDVVTWTALVGGF 161
G C ++D+AI LG + N + PD++T++ L+ G
Sbjct: 475 GLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGL 534
Query: 162 CQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDI 221
C+ G+ AK LF M P+ + + K S A + + MEK +
Sbjct: 535 CKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSL 594
Query: 222 VVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMR 281
YN ++ G+ + T+N I+ LC +++A LL
Sbjct: 595 ETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDE 654
Query: 282 MEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQ 315
M + PN S+ + + D +++ +
Sbjct: 655 MMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFE 688
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 161/343 (46%), Gaps = 3/343 (0%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KGI+P +YN +I K + G+L M + GV+ + T+++L++ K G +S
Sbjct: 253 KGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSD 312
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A + M G+E +V Y SLI C + M+ A +FD + +G PS TY +LI
Sbjct: 313 AEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALID 372
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G CKV ++ A L+ EM ++G+ V + L+ G+C+ G A ++ M++ G
Sbjct: 373 GVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQA 432
Query: 185 NLQTCTVILDGLFKCRFHSEAMS-LFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXX 243
++ TC I + + + EA LFR ME + L V Y ++D C
Sbjct: 433 DVFTCNTIASCFNRLKRYDEAKQWLFRMME-GGVKLSTVSYTNLIDVYCKEGNVEEAKRL 491
Query: 244 XXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLR 303
+ T+N+MI C +G + EA +L ME NG P+ +Y +HG
Sbjct: 492 FVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECI 551
Query: 304 KLDISRSEKYLQIMKCKGFPVDANTTELLIC-IYSANKGDNAF 345
++ + + M KG ++ T ++I + A K D AF
Sbjct: 552 ADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAF 594
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 131/297 (44%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+GI+ + Y LI + G K L E+ +KG+ P T+ L+DG K G +
Sbjct: 323 RGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGA 382
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A +M M GV V +N+LI GYC + ++EA ++D+M ++G V T N++
Sbjct: 383 AEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIAS 442
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
+ ++K D A L M+ G+K V++T L+ +C+ G AK LF M G P
Sbjct: 443 CFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQP 502
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
N T V++ K EA L ME + +D D Y ++ G C
Sbjct: 503 NAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLF 562
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGL 301
++ T+ +MI GL G DEA L M+ G + Y + +
Sbjct: 563 SEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 114/229 (49%), Gaps = 2/229 (0%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMM-QKGVMPDVQTFSILVDGFGKEGLV 62
SKG+ T V +N LI G + G E A ++Y++M QKG DV T + + F +
Sbjct: 392 SKGVNITQVVFNTLIDGYCRKGMVDE-ASMIYDVMEQKGFQADVFTCNTIASCFNRLKRY 450
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
A+ + M+ GV+ + V+Y +LI YC +EEA ++F M +G P+ +TYN +
Sbjct: 451 DEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVM 510
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
I+ +CK + A L M G+ PD T+T+L+ G C A LF M G
Sbjct: 511 IYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGL 570
Query: 183 VPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGM 231
N T TV++ GL K EA L+ M++ +D VY ++ M
Sbjct: 571 DQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 133/336 (39%), Gaps = 35/336 (10%)
Query: 33 LLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYC 92
+ M+ GV V + +I+V+G + G V ++ ++ G++P TYN++I Y
Sbjct: 211 IFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYV 270
Query: 93 LRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVV 152
+ V +M + G + + VTY L+ K + A L EM G++ DV
Sbjct: 271 KQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVH 330
Query: 153 TWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAM 212
+T+L+ C+ G A LF + E G P+ T ++DG+ K A L M
Sbjct: 331 VYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEM 390
Query: 213 EKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNI----------- 261
+ +++ VV+N ++DG C D +T N
Sbjct: 391 QSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRY 450
Query: 262 ------------------------MIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVF 297
+I C EG ++EA+ L + M G PN +YNV
Sbjct: 451 DEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVM 510
Query: 298 VHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLI 333
++ ++ I + K M+ G D+ T LI
Sbjct: 511 IYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLI 546
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 129/300 (43%), Gaps = 7/300 (2%)
Query: 49 FSILVD-GFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLM 107
F + VD G +EGL V +MV G+ + + + R +++ +++F M
Sbjct: 161 FRVYVDNGMFEEGLR-----VFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRM 215
Query: 108 VRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKP 167
V G +V + ++ G C+ +V+++ L+ E +G+KP+ T+ ++ + +
Sbjct: 216 VDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDF 275
Query: 168 LAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVM 227
+ + MK+ G V N T T++++ K S+A LF M + I+ D+ VY +
Sbjct: 276 SGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSL 335
Query: 228 LDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGC 287
+ C +YT+ +I G+C G + AE L+ M+ G
Sbjct: 336 ISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGV 395
Query: 288 PPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANT-TELLICIYSANKGDNAFQ 346
+ +N + G RK + + +M+ KGF D T + C + D A Q
Sbjct: 396 NITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQ 455
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 65/158 (41%), Gaps = 35/158 (22%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
+SKG+QP ++YN +I K G+ KE L M G+ PD
Sbjct: 496 SSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPD----------------- 538
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
TY SLI G C+ ++EAM++F M +G + VTY +
Sbjct: 539 ------------------SYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVM 580
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGG 160
I G K D A L EM +G D +TAL+G
Sbjct: 581 ISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGS 618
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 144 bits (364), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 149/308 (48%), Gaps = 35/308 (11%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+QP +++N L+ + G W+ L EM + + DV +++ L+D K G + A
Sbjct: 334 GVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLA 393
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ M + PNVV+Y+++I G+ + +EA+ +F M G V+YN+L+
Sbjct: 394 FEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSI 453
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+ KV + A+ +L EM + G+K DVVT+ AL+GG+ + GK K++F MK +PN
Sbjct: 454 YTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPN 513
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
L T + ++DG K + EAM +FR + + + D+V+Y+ ++D
Sbjct: 514 LLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALID---------------- 557
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
LC GL+ A L+ M + G PN +YN + R
Sbjct: 558 -------------------ALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSA 598
Query: 306 DISRSEKY 313
+ RS Y
Sbjct: 599 TMDRSADY 606
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 105/192 (54%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
K I P +VSY+ +I G K GR+ E L EM G+ D +++ L+ + K G
Sbjct: 403 KRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEE 462
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A ++ M VG++ +VVTYN+L+GGY + + +E KVF M R LP+++TY++LI
Sbjct: 463 ALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLID 522
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G+ K A+ + E + GL+ DVV ++AL+ C+ G +A L M + G P
Sbjct: 523 GYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISP 582
Query: 185 NLQTCTVILDGL 196
N+ T I+D
Sbjct: 583 NVVTYNSIIDAF 594
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 118/227 (51%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
++ I+ + SYN L+ + K G+ +L +M K +MP+V ++S ++DGF K G
Sbjct: 367 NRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFD 426
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A + G M ++G+ + V+YN+L+ Y + EEA+ + M G VVTYN+L+
Sbjct: 427 EALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALL 486
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
G+ K D + EM E + P+++T++ L+ G+ + G A E+F K G
Sbjct: 487 GGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLR 546
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDG 230
++ + ++D L K A+SL M K I ++V YN ++D
Sbjct: 547 ADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDA 593
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 138/326 (42%), Gaps = 10/326 (3%)
Query: 15 NCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVH 74
+ +I L ++G+ + G V FS L+ +G+ GL A V M
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 75 VGVEPNVVTYNSLIGGYCLRHQME--EAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDV 132
G+ PN+VTYN++I C + ME + K FD M R G P +T+NSL+ +
Sbjct: 297 YGLRPNLVTYNAVIDA-CGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLW 355
Query: 133 DRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVI 192
+ A L EM N ++ DV ++ L+ C+ G+ A E+ M +PN+ + + +
Sbjct: 356 EAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTV 415
Query: 193 LDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXX 252
+DG K EA++LF M I LD V YN +L
Sbjct: 416 IDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGI 475
Query: 253 XFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEK 312
D T+N ++ G +G DE +++ M+ PN +Y+ + G + + +
Sbjct: 476 KKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAME 535
Query: 313 YLQIMKCKGFPVDANTTELLICIYSA 338
+ K G D + +YSA
Sbjct: 536 IFREFKSAGLRAD-------VVLYSA 554
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 75/132 (56%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
S GI+ +V+YN L+ G K G++ E + EM ++ V+P++ T+S L+DG+ K GL
Sbjct: 472 SVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYK 531
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A + G+ +VV Y++LI C + A+ + D M + G P+VVTYNS+I
Sbjct: 532 EAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSII 591
Query: 124 HGWCKVKDVDRA 135
+ + +DR+
Sbjct: 592 DAFGRSATMDRS 603
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 144 bits (364), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 162/333 (48%), Gaps = 7/333 (2%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
++KG P VSY +I + + G KEG L + P V ++ L++G KE
Sbjct: 208 SNKGCCPDAVSYTTVISSMCEVGLVKEGREL-----AERFEPVVSVYNALINGLCKEHDY 262
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
GA +M MV G+ PNV++Y++LI C Q+E A M++RGC P++ T +SL
Sbjct: 263 KGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSL 322
Query: 123 IHGWCKVKDVDRAICLLGEMVNE-GLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHG 181
+ G A+ L +M+ GL+P+VV + LV GFC G + A +F M+E G
Sbjct: 323 VKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIG 382
Query: 182 QVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXX 241
PN++T +++G K A+ ++ M S ++VVY M++ +C
Sbjct: 383 CSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAE 442
Query: 242 XXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEE-NGCPPNRCSYNVFVHG 300
TFN I+GLC G LD AE++ +ME+ + CPPN +YN + G
Sbjct: 443 SLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDG 502
Query: 301 LLRKLDISRSEKYLQIMKCKGFPVDANTTELLI 333
L + I + + + +G ++T L+
Sbjct: 503 LAKANRIEEAYGLTREIFMRGVEWSSSTYNTLL 535
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 154/317 (48%), Gaps = 2/317 (0%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KGI P ++SY+ LI L G+ + L +M+++G P++ T S LV G G
Sbjct: 275 KGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFD 334
Query: 65 ARCVMGFMVH-VGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A + M+ G++PNVV YN+L+ G+C + +A+ VF M GC P++ TY SLI
Sbjct: 335 ALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLI 394
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
+G+ K +D A+ + +M+ G P+VV +T +V C+ K A+ L M +
Sbjct: 395 NGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCA 454
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSD-IDLDIVVYNVMLDGMCXXXXXXXXXX 242
P++ T + GL A +FR ME+ +IV YN +LDG+
Sbjct: 455 PSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYG 514
Query: 243 XXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLL 302
+ + T+N ++ G C GL A +L+ +M +G P+ + N+ +
Sbjct: 515 LTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYC 574
Query: 303 RKLDISRSEKYLQIMKC 319
++ R+ + L ++ C
Sbjct: 575 KQGKAERAAQMLDLVSC 591
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 141/317 (44%), Gaps = 12/317 (3%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G P++ YN ++ L R + + +M + G P+V T+++L+ K V GA
Sbjct: 141 GCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGA 200
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYC---LRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
+ ++ M + G P+ V+Y ++I C L + E + F+ P V YN+L
Sbjct: 201 KKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFE--------PVVSVYNAL 252
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
I+G CK D A L+ EMV +G+ P+V++++ L+ C G+ A M + G
Sbjct: 253 INGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGC 312
Query: 183 VPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKS-DIDLDIVVYNVMLDGMCXXXXXXXXX 241
PN+ T + ++ G F +A+ L+ M + + ++V YN ++ G C
Sbjct: 313 HPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAV 372
Query: 242 XXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGL 301
+ T+ +I G G LD A + +M +GC PN Y V L
Sbjct: 373 SVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEAL 432
Query: 302 LRKLDISRSEKYLQIMK 318
R +E ++IM
Sbjct: 433 CRHSKFKEAESLIEIMS 449
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 122/301 (40%), Gaps = 36/301 (11%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+QP +V+YN L+QG G + + M + G P+++T+ L++GF K G + GA
Sbjct: 347 GLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGA 406
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ M+ G PNVV Y +++ C + +EA + ++M + C PSV T+N+ I G
Sbjct: 407 VYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKG 466
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
C +D A + +M + P PN
Sbjct: 467 LCDAGRLDWAEKVFRQMEQQHRCP----------------------------------PN 492
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+ T +LDGL K EA L R + ++ YN +L G C
Sbjct: 493 IVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVG 552
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEEL--LMRMEENGCPPNRCSYNVFVHGLLR 303
D T N++I C +G + A ++ L+ P+ SY + GL R
Sbjct: 553 KMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCR 612
Query: 304 K 304
Sbjct: 613 S 613
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 136/311 (43%), Gaps = 6/311 (1%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
+ NS + T +++ +I+ L G+ LL +M +G F ++ + + G
Sbjct: 66 IANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVG 125
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
L A + + G +P+V YN ++ ++++ V+ M R G P+V TYN
Sbjct: 126 LAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYN 185
Query: 121 SLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEH 180
L+ CK VD A LL EM N+G PD V++T ++ C+VG +EL +
Sbjct: 186 VLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFE-- 243
Query: 181 GQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXX 240
P + +++GL K + A L R M + I +++ Y+ +++ +C
Sbjct: 244 ---PVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELA 300
Query: 241 XXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEEN-GCPPNRCSYNVFVH 299
+ YT + +++G G +A +L +M G PN +YN V
Sbjct: 301 FSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQ 360
Query: 300 GLLRKLDISRS 310
G +I ++
Sbjct: 361 GFCSHGNIVKA 371
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 86/163 (52%), Gaps = 2/163 (1%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
M+ P IV+YN L+ GL K R +E GL E+ +GV T++ L+ G G
Sbjct: 483 MEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAG 542
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMV--RRGCLPSVVT 118
L A ++G M+ G P+ +T N +I YC + + E A ++ DL+ RR P V++
Sbjct: 543 LPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVIS 602
Query: 119 YNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGF 161
Y ++I G C+ + + LL M++ G+ P + TW+ L+ F
Sbjct: 603 YTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCF 645
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 110/229 (48%), Gaps = 3/229 (1%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
+ G P +V Y +++ L + ++KE L+ M ++ P V TF+ + G G +
Sbjct: 415 TSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLD 474
Query: 64 GARCVMGFMVHVG-VEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
A V M PN+VTYN L+ G +++EEA + + RG S TYN+L
Sbjct: 475 WAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTL 534
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKEL--FFTMKEH 180
+HG C A+ L+G+M+ +G PD +T ++ +C+ GK A ++ +
Sbjct: 535 LHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRR 594
Query: 181 GQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLD 229
P++ + T ++ GL + + + L M + I I ++V+++
Sbjct: 595 KWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 149/318 (46%), Gaps = 1/318 (0%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G +P ++++ LI GL K G K+ +L EM++ G P+V T + L+DG K G A
Sbjct: 282 GFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKA 341
Query: 66 -RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
R + + +PNV TY S+IGGYC ++ A +F M +G P+V TY +LI+
Sbjct: 342 FRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLIN 401
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G CK RA L+ M +EG P++ T+ A + C+ + A EL G
Sbjct: 402 GHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEA 461
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
+ T T+++ K ++A++ F M K+ + D+ + N+++ C
Sbjct: 462 DGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLF 521
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
T+ MI C EG +D A + M+ +GC P+ +Y + GL +K
Sbjct: 522 QLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKK 581
Query: 305 LDISRSEKYLQIMKCKGF 322
+ + K + M +G
Sbjct: 582 SMVDEACKLYEAMIDRGL 599
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 164/365 (44%), Gaps = 36/365 (9%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G+ P SY ++ G F+ G+ +E L M+Q+G +PD T ++++ + GLV+
Sbjct: 211 RGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNR 270
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A M+ +G +PN++ + SLI G C + +++A ++ + MVR G P+V T+ +LI
Sbjct: 271 AIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALID 330
Query: 125 GWCKVKDVDRAICLLGEMV-NEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
G CK ++A L ++V ++ KP+V T+T+++GG+C+ K A+ LF MKE G
Sbjct: 331 GLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLF 390
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXX 243
PN+ T T +++G K A L M +I YN +D +C
Sbjct: 391 PNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYEL 450
Query: 244 XXXXXXXXXXFD--TYTF---------------------------------NIMIRGLCW 268
D TYT NI+I C
Sbjct: 451 LNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCR 510
Query: 269 EGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANT 328
+ + E+E L + G P + +Y + ++ DI + KY MK G D+ T
Sbjct: 511 QKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFT 570
Query: 329 TELLI 333
LI
Sbjct: 571 YGSLI 575
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 157/348 (45%), Gaps = 1/348 (0%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
++G+ P+ ++ NC+++ + G + + EM +GV+PD ++ ++V G ++G +
Sbjct: 175 NQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQ 234
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A + M+ G P+ T ++ C + A+ F M+ G P+++ + SLI
Sbjct: 235 EADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLI 294
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTM-KEHGQ 182
G CK + +A +L EMV G KP+V T TAL+ G C+ G A LF + +
Sbjct: 295 DGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTY 354
Query: 183 VPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXX 242
PN+ T T ++ G K + A LF M++ + ++ Y +++G C
Sbjct: 355 KPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYE 414
Query: 243 XXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLL 302
+ YT+N I LC + EA ELL + G + +Y + +
Sbjct: 415 LMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQC 474
Query: 303 RKLDISRSEKYLQIMKCKGFPVDANTTELLICIYSANKGDNAFQELQQ 350
++ DI+++ + M GF D +LI + K + L Q
Sbjct: 475 KQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQ 522
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 148/320 (46%), Gaps = 3/320 (0%)
Query: 16 CLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHV 75
C+++ + GR E G++ +M +G+ P T + +++ + GL+ A V M
Sbjct: 152 CMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVR 211
Query: 76 GVEPNVVTYNSLIGGYCLRH-QMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDR 134
GV P+ +Y ++ G C R +++EA + M++RG +P T ++ C+ V+R
Sbjct: 212 GVVPDSSSYKLMVIG-CFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNR 270
Query: 135 AICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILD 194
AI +M++ G KP+++ +T+L+ G C+ G A E+ M +G PN+ T T ++D
Sbjct: 271 AIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALID 330
Query: 195 GLFKCRFHSEAMSLFRAMEKSDI-DLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXX 253
GL K + +A LF + +SD ++ Y M+ G C
Sbjct: 331 GLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLF 390
Query: 254 FDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKY 313
+ T+ +I G C G A EL+ M + G PN +YN + L +K + +
Sbjct: 391 PNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYEL 450
Query: 314 LQIMKCKGFPVDANTTELLI 333
L G D T +LI
Sbjct: 451 LNKAFSCGLEADGVTYTILI 470
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G P I +YN I L K R E LL + G+ D T++IL+ K+ ++
Sbjct: 422 EGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQ 481
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A M G E ++ N LI +C + +M+E+ ++F L+V G +P+ TY S+I
Sbjct: 482 ALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMIS 541
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
+CK D+D A+ M G PD T+ +L+ G C+ A +L+ M + G P
Sbjct: 542 CYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSP 601
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEK 214
T + K + AM L ++K
Sbjct: 602 PEVTRVTLAYEYCKRNDSANAMILLEPLDK 631
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 102/244 (41%), Gaps = 35/244 (14%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
S +P + +Y +I G K + L M ++G+ P+V T++ L++G K G
Sbjct: 351 SDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFG 410
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A +M M G PN+ TYN+ I C + + EA ++ + G VTY LI
Sbjct: 411 RAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILI 470
Query: 124 HGWCKVKDVDRAICLLGEM-----------------------------------VNEGLK 148
CK D+++A+ M V+ GL
Sbjct: 471 QEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLI 530
Query: 149 PDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSL 208
P T+T+++ +C+ G A + F MK HG VP+ T ++ GL K EA L
Sbjct: 531 PTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKL 590
Query: 209 FRAM 212
+ AM
Sbjct: 591 YEAM 594
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 152/328 (46%), Gaps = 32/328 (9%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLY-EMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
G+ P +N LI G + L+Y +M+ GV PDV ++L+ F K G +S
Sbjct: 88 GVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSF 147
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A ++ V + + VTYN++I G C +EA + MV+ G LP V+YN+LI
Sbjct: 148 AISLLRNRV---ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLID 204
Query: 125 GWCKVKDVDRAICLLGE----------------------------MVNEGLKPDVVTWTA 156
G+CKV + RA L+ E MV G PDVVT+++
Sbjct: 205 GFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSS 264
Query: 157 LVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSD 216
++ C+ GK L L M+E PN T T ++D LFK + A++L+ M
Sbjct: 265 IINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRG 324
Query: 217 IDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAE 276
I +D+VVY V++DG+ + T+ ++ GLC G L AE
Sbjct: 325 IPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAE 384
Query: 277 ELLMRMEENGCPPNRCSYNVFVHGLLRK 304
++ +M E PN +Y+ ++G ++K
Sbjct: 385 FIITQMLEKSVIPNVVTYSSMINGYVKK 412
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 153/328 (46%), Gaps = 1/328 (0%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G P +V+++ +I L K G+ EG LL EM + V P+ T++ LVD K + A
Sbjct: 254 GFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHA 313
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ MV G+ ++V Y L+ G + EA K F +++ +P+VVTY +L+ G
Sbjct: 314 LALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDG 373
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
CK D+ A ++ +M+ + + P+VVT+++++ G+ + G A L M++ VPN
Sbjct: 374 LCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPN 433
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
T ++DGLFK A+ L + M ++ + + + +++ +
Sbjct: 434 GFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVK 493
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
D + +I G + A M+E G P + SYNV + G+L+
Sbjct: 494 DMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFG 553
Query: 306 DISRSEKYLQIMKCKGFPVDANTTELLI 333
+ Y + M+ KG D T +++
Sbjct: 554 KVGADWAY-KGMREKGIEPDIATFNIMM 580
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 152/357 (42%), Gaps = 41/357 (11%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYE-MMQKGVMPDVQTFSILVDGFGKEGLVS 63
+G+ +VSYN LI G+ KFG K GA Y+ M +KG+ PD+ TF+I+++ K+G
Sbjct: 533 RGMPWDVVSYNVLISGMLKFG--KVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSE 590
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVT----- 118
G + M G++P++++ N ++G C +MEEA+ + + M+ P++ T
Sbjct: 591 GILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFL 650
Query: 119 ------------------------------YNSLIHGWCKVKDVDRAICLLGEMVNEGLK 148
YN+LI CK+ +A ++G+M G
Sbjct: 651 DTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFI 710
Query: 149 PDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSL 208
PD VT+ +L+ G+ A + M E G PN+ T I+ GL E
Sbjct: 711 PDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKW 770
Query: 209 FRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCW 268
M+ + D YN ++ G T T+N++I
Sbjct: 771 LSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFAN 830
Query: 269 EGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLR---KLDISRSEKYLQIMKCKGF 322
G + +A ELL M + G PN +Y + GL + D+ ++K + + + KG
Sbjct: 831 VGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGL 887
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 102/201 (50%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
S GI+ + YN LI L K G K+ A ++ +M +G +PD TF+ L+ G+ V
Sbjct: 671 SYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVR 730
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A M+ G+ PNV TYN++I G ++E K M RG P TYN+LI
Sbjct: 731 KALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALI 790
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
G K+ ++ ++ + EM+ +GL P T+ L+ F VGK L A+EL M + G
Sbjct: 791 SGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVS 850
Query: 184 PNLQTCTVILDGLFKCRFHSE 204
PN T ++ GL K H +
Sbjct: 851 PNTSTYCTMISGLCKLCTHPD 871
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 148/357 (41%), Gaps = 28/357 (7%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYE----------------------------M 37
GI P VSYN LI G K G + L+ E M
Sbjct: 191 GILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDM 250
Query: 38 MQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQM 97
+ G PDV TFS +++ K G V ++ M + V PN VTY +L+ +
Sbjct: 251 VMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIY 310
Query: 98 EEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTAL 157
A+ ++ MV RG +V Y L+ G K D+ A ++ + P+VVT+TAL
Sbjct: 311 RHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTAL 370
Query: 158 VGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDI 217
V G C+ G +A+ + M E +PN+ T + +++G K EA+SL R ME ++
Sbjct: 371 VDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNV 430
Query: 218 DLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEE 277
+ Y ++DG+ + Y + ++ L G + E +
Sbjct: 431 VPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKG 490
Query: 278 LLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLIC 334
L+ M G ++ +Y + + D + + + M+ +G P D + +LI
Sbjct: 491 LVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLIS 547
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 137/294 (46%), Gaps = 1/294 (0%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+GI +V Y L+ GLFK G +E +++ +P+V T++ LVDG K G +S
Sbjct: 323 RGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSS 382
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A ++ M+ V PNVVTY+S+I GY + +EEA+ + M + +P+ TY ++I
Sbjct: 383 AEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVID 442
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G K + AI L EM G++ + ALV ++G+ K L M G
Sbjct: 443 GLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTL 502
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
+ T ++D FK A++ M++ + D+V YNV++ GM
Sbjct: 503 DQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYK 562
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFV 298
D TFNIM+ +G + +L +M+ G P+ S N+ V
Sbjct: 563 GMREKGIEP-DIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVV 615
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 98/276 (35%), Gaps = 36/276 (13%)
Query: 81 VVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLL- 139
V +++L Y ++ A + M G +P +NSLIH + V + L+
Sbjct: 58 VSLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIY 117
Query: 140 GEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCT--VILDGLF 197
+M+ G+ PDV L+ FC+VG+ A L +V ++ T T ++ GL
Sbjct: 118 SKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLL-----RNRVISIDTVTYNTVISGLC 172
Query: 198 KCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXF--- 254
+ EA M K I D V YN ++DG C
Sbjct: 173 EHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTI 232
Query: 255 -------------------------DTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPP 289
D TF+ +I LC G + E LL MEE P
Sbjct: 233 LLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYP 292
Query: 290 NRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVD 325
N +Y V L + + M +G PVD
Sbjct: 293 NHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVD 328
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 156/333 (46%), Gaps = 12/333 (3%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
+ G+ P +V+Y+ +I GL K G++ L EM K ++P+ +T L+ G ++G++
Sbjct: 391 ADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLL 450
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
AR ++ ++ G ++V YN +I GY +EEA+++F +++ G PSV T+NSLI
Sbjct: 451 EARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLI 510
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
+G+CK +++ A +L + GL P VV++T L+ + G + EL MK G
Sbjct: 511 YGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIP 570
Query: 184 PNLQTCTVILDGL------------FKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGM 231
P T +VI GL + R + R ME I D + YN ++ +
Sbjct: 571 PTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYL 630
Query: 232 CXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNR 291
C + T+NI+I LC G + +A+ + ++E ++
Sbjct: 631 CRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSK 690
Query: 292 CSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPV 324
+Y + K D + K + +GF V
Sbjct: 691 FAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNV 723
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 165/347 (47%), Gaps = 1/347 (0%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
K I P++VS+N ++ G K G +++ G++P V + +IL++G G ++
Sbjct: 216 KDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAE 275
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A + M GVEP+ VTYN L G+ L + A +V M+ +G P V+TY L+
Sbjct: 276 ALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLC 335
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPD-VVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
G C++ ++D + LL +M++ G + + ++ + ++ G C+ G+ A LF MK G
Sbjct: 336 GQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLS 395
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXX 243
P+L ++++ GL K A+ L+ M I + + +L G+C
Sbjct: 396 PDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSL 455
Query: 244 XXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLR 303
D +NI+I G G ++EA EL + E G P+ ++N ++G +
Sbjct: 456 LDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCK 515
Query: 304 KLDISRSEKYLQIMKCKGFPVDANTTELLICIYSANKGDNAFQELQQ 350
+I+ + K L ++K G + L+ Y+ + EL++
Sbjct: 516 TQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRR 562
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 179/401 (44%), Gaps = 52/401 (12%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
N G++P V+YN L +G G ++ +M+ KG+ PDV T++IL+ G + G +
Sbjct: 284 NKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNI 343
Query: 63 SGARCVMGFMVHVGVEPN-VVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNS 121
++ M+ G E N ++ + ++ G C +++EA+ +F+ M G P +V Y+
Sbjct: 344 DMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSI 403
Query: 122 LIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHG 181
+IHG CK+ D A+ L EM ++ + P+ T AL+ G CQ G L A+ L ++ G
Sbjct: 404 VIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSG 463
Query: 182 QVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXX 241
+ ++ +++DG K EA+ LF+ + ++ I + +N ++ G C
Sbjct: 464 ETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEAR 523
Query: 242 X---------XXXXXXXXXXXFDTY--------------------------TFNIMIRGL 266
D Y T++++ +GL
Sbjct: 524 KILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGL 583
Query: 267 C--W----------EGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYL 314
C W E + ++ ++ L ME G PP++ +YN + L R +S + +L
Sbjct: 584 CRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFL 643
Query: 315 QIMKCKGFPVDANTTELLI---CIYS-ANKGDNAFQELQQN 351
+IMK + + T +LI C+Y K D+ LQ+
Sbjct: 644 EIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQ 684
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 143/335 (42%), Gaps = 24/335 (7%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
K I P ++ L+ GL + G E LL ++ G D+ ++I++DG+ K G +
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A + ++ G+ P+V T+NSLI GYC + EA K+ D++ G PSVV+Y +L+
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKP----LAAKELFFT---- 176
+ + L EM EG+ P VT++ + G C+ K +E F
Sbjct: 547 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQ 606
Query: 177 ----MKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMC 232
M+ G P+ T I+ L + + S A M+ ++D YN+++D +C
Sbjct: 607 GLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLC 666
Query: 233 XXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRC 292
+ + +I+ C +G + A +L ++ G +
Sbjct: 667 VYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIR 726
Query: 293 SYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDAN 327
Y+ ++ L R+ +M C FP +N
Sbjct: 727 DYSAVINRLCRR----------HLMNC--FPGQSN 749
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 112/234 (47%), Gaps = 3/234 (1%)
Query: 78 EPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAIC 137
+ N TY++++ G C + ++E+A+ + PSVV++NS++ G+CK+ VD A
Sbjct: 184 DKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKS 243
Query: 138 LLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLF 197
++ GL P V + L+ G C VG A EL M +HG P+ T ++ G
Sbjct: 244 FFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFH 303
Query: 198 KCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTY 257
S A + R M + D++ Y ++L G C ++
Sbjct: 304 LLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSI 363
Query: 258 T-FNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGL--LRKLDIS 308
++M+ GLC G +DEA L +M+ +G P+ +Y++ +HGL L K D++
Sbjct: 364 IPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA 417
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 90/207 (43%), Gaps = 7/207 (3%)
Query: 128 KVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQ 187
+++ VD ++ +L +M ++ L ++ +++ F + K + EH
Sbjct: 136 RLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEH------- 188
Query: 188 TCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXX 247
T + ++DGL + + +A+ R E DI +V +N ++ G C
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 248 XXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDI 307
Y+ NI+I GLC G + EA EL M ++G P+ +YN+ G I
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 308 SRSEKYLQIMKCKGFPVDANTTELLIC 334
S + + ++ M KG D T +L+C
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLC 335
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 66/126 (52%), Gaps = 2/126 (1%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQ-KGVMPDVQTFSILVDGFGKEGLV 62
S+GI P ++YN +IQ L + + GA + E+M+ + + T++IL+D G +
Sbjct: 613 SEGIPPDQITYNTIIQYLCRV-KHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYI 671
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
A + + V + Y +LI +C++ E A+K+F ++ RG S+ Y+++
Sbjct: 672 RKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAV 731
Query: 123 IHGWCK 128
I+ C+
Sbjct: 732 INRLCR 737
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 156/333 (46%), Gaps = 12/333 (3%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
+ G+ P +V+Y+ +I GL K G++ L EM K ++P+ +T L+ G ++G++
Sbjct: 391 ADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLL 450
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
AR ++ ++ G ++V YN +I GY +EEA+++F +++ G PSV T+NSLI
Sbjct: 451 EARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLI 510
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
+G+CK +++ A +L + GL P VV++T L+ + G + EL MK G
Sbjct: 511 YGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIP 570
Query: 184 PNLQTCTVILDGL------------FKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGM 231
P T +VI GL + R + R ME I D + YN ++ +
Sbjct: 571 PTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYL 630
Query: 232 CXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNR 291
C + T+NI+I LC G + +A+ + ++E ++
Sbjct: 631 CRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSK 690
Query: 292 CSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPV 324
+Y + K D + K + +GF V
Sbjct: 691 FAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNV 723
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 165/347 (47%), Gaps = 1/347 (0%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
K I P++VS+N ++ G K G +++ G++P V + +IL++G G ++
Sbjct: 216 KDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAE 275
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A + M GVEP+ VTYN L G+ L + A +V M+ +G P V+TY L+
Sbjct: 276 ALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLC 335
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPD-VVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
G C++ ++D + LL +M++ G + + ++ + ++ G C+ G+ A LF MK G
Sbjct: 336 GQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLS 395
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXX 243
P+L ++++ GL K A+ L+ M I + + +L G+C
Sbjct: 396 PDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSL 455
Query: 244 XXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLR 303
D +NI+I G G ++EA EL + E G P+ ++N ++G +
Sbjct: 456 LDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCK 515
Query: 304 KLDISRSEKYLQIMKCKGFPVDANTTELLICIYSANKGDNAFQELQQ 350
+I+ + K L ++K G + L+ Y+ + EL++
Sbjct: 516 TQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRR 562
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 179/401 (44%), Gaps = 52/401 (12%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
N G++P V+YN L +G G ++ +M+ KG+ PDV T++IL+ G + G +
Sbjct: 284 NKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNI 343
Query: 63 SGARCVMGFMVHVGVEPN-VVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNS 121
++ M+ G E N ++ + ++ G C +++EA+ +F+ M G P +V Y+
Sbjct: 344 DMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSI 403
Query: 122 LIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHG 181
+IHG CK+ D A+ L EM ++ + P+ T AL+ G CQ G L A+ L ++ G
Sbjct: 404 VIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSG 463
Query: 182 QVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXX 241
+ ++ +++DG K EA+ LF+ + ++ I + +N ++ G C
Sbjct: 464 ETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEAR 523
Query: 242 X---------XXXXXXXXXXXFDTY--------------------------TFNIMIRGL 266
D Y T++++ +GL
Sbjct: 524 KILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGL 583
Query: 267 C--W----------EGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYL 314
C W E + ++ ++ L ME G PP++ +YN + L R +S + +L
Sbjct: 584 CRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFL 643
Query: 315 QIMKCKGFPVDANTTELLI---CIYS-ANKGDNAFQELQQN 351
+IMK + + T +LI C+Y K D+ LQ+
Sbjct: 644 EIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQ 684
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 143/335 (42%), Gaps = 24/335 (7%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
K I P ++ L+ GL + G E LL ++ G D+ ++I++DG+ K G +
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A + ++ G+ P+V T+NSLI GYC + EA K+ D++ G PSVV+Y +L+
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKP----LAAKELFFT---- 176
+ + L EM EG+ P VT++ + G C+ K +E F
Sbjct: 547 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQ 606
Query: 177 ----MKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMC 232
M+ G P+ T I+ L + + S A M+ ++D YN+++D +C
Sbjct: 607 GLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLC 666
Query: 233 XXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRC 292
+ + +I+ C +G + A +L ++ G +
Sbjct: 667 VYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIR 726
Query: 293 SYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDAN 327
Y+ ++ L R+ +M C FP +N
Sbjct: 727 DYSAVINRLCRR----------HLMNC--FPGQSN 749
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 112/234 (47%), Gaps = 3/234 (1%)
Query: 78 EPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAIC 137
+ N TY++++ G C + ++E+A+ + PSVV++NS++ G+CK+ VD A
Sbjct: 184 DKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKS 243
Query: 138 LLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLF 197
++ GL P V + L+ G C VG A EL M +HG P+ T ++ G
Sbjct: 244 FFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFH 303
Query: 198 KCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTY 257
S A + R M + D++ Y ++L G C ++
Sbjct: 304 LLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSI 363
Query: 258 T-FNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGL--LRKLDIS 308
++M+ GLC G +DEA L +M+ +G P+ +Y++ +HGL L K D++
Sbjct: 364 IPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA 417
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 90/207 (43%), Gaps = 7/207 (3%)
Query: 128 KVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQ 187
+++ VD ++ +L +M ++ L ++ +++ F + K + EH
Sbjct: 136 RLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEH------- 188
Query: 188 TCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXX 247
T + ++DGL + + +A+ R E DI +V +N ++ G C
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 248 XXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDI 307
Y+ NI+I GLC G + EA EL M ++G P+ +YN+ G I
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 308 SRSEKYLQIMKCKGFPVDANTTELLIC 334
S + + ++ M KG D T +L+C
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLC 335
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 66/126 (52%), Gaps = 2/126 (1%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQ-KGVMPDVQTFSILVDGFGKEGLV 62
S+GI P ++YN +IQ L + + GA + E+M+ + + T++IL+D G +
Sbjct: 613 SEGIPPDQITYNTIIQYLCRV-KHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYI 671
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
A + + V + Y +LI +C++ E A+K+F ++ RG S+ Y+++
Sbjct: 672 RKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAV 731
Query: 123 IHGWCK 128
I+ C+
Sbjct: 732 INRLCR 737
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 165/366 (45%), Gaps = 37/366 (10%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G +P + SY+ +I L K G+ + L EM ++GV PDV ++IL+DGF KE
Sbjct: 178 EGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKT 237
Query: 65 ARCVMGFMVH-VGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A + ++ V PNV T+N +I G ++++ +K+++ M + + TY+SLI
Sbjct: 238 AMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLI 297
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
HG C +VD+A + E+ DVVT+ ++GGFC+ GK + EL+ M EH
Sbjct: 298 HGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIM-EHKNS 356
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAM------------------------------- 212
N+ + +++ GL + EA ++R M
Sbjct: 357 VNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGV 416
Query: 213 ----EKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCW 268
E S LD+ Y ++D +C +++ N +I GL
Sbjct: 417 MQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIR 476
Query: 269 EGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANT 328
+ L EA L M +NGC P SYN+ + GL + + +++ M G+ D T
Sbjct: 477 DSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKT 536
Query: 329 TELLIC 334
+L+C
Sbjct: 537 YSILLC 542
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 160/326 (49%), Gaps = 2/326 (0%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
M+ G +P I SYN L+ + +W + L GV P++QT+++L+ K+
Sbjct: 104 MREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKK 163
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
AR + +M G +P+V +Y+++I ++++A+++FD M RG P V YN
Sbjct: 164 EFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYN 223
Query: 121 SLIHGWCKVKDVDRAICLLGEMV-NEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKE 179
LI G+ K KD A+ L ++ + + P+V T ++ G + G+ +++ MK+
Sbjct: 224 ILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQ 283
Query: 180 HGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXX 239
+ + +L T + ++ GL +A S+F +++ +D+V YN ML G C
Sbjct: 284 NEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFC-RCGKIK 342
Query: 240 XXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVH 299
+ ++NI+I+GL G +DEA + M G ++ +Y +F+H
Sbjct: 343 ESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIH 402
Query: 300 GLLRKLDISRSEKYLQIMKCKGFPVD 325
GL ++++ +Q ++ G +D
Sbjct: 403 GLCVNGYVNKALGVMQEVESSGGHLD 428
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 110/191 (57%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G +PT+VSYN LI GL K G++ E + + EM++ G PD++T+SIL+ G ++ + A
Sbjct: 494 GCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLA 553
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ + G+E +V+ +N LI G C ++++AM V M R C ++VTYN+L+ G
Sbjct: 554 LELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEG 613
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+ KV D +RA + G M GL+PD++++ ++ G C A E F + HG P
Sbjct: 614 FFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPT 673
Query: 186 LQTCTVILDGL 196
+ T +++ +
Sbjct: 674 VYTWNILVRAV 684
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 128/271 (47%), Gaps = 2/271 (0%)
Query: 52 LVDGFGKEGLVSGARCVMGFMVHV-GVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRR 110
++ +GK + A V M + G EP + +YN+L+ + Q + +F
Sbjct: 84 VIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETA 143
Query: 111 GCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAA 170
G P++ TYN LI CK K+ ++A L M EG KPDV +++ ++ + GK A
Sbjct: 144 GVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDA 203
Query: 171 KELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLF-RAMEKSDIDLDIVVYNVMLD 229
ELF M E G P++ +++DG K + H AM L+ R +E S + ++ +N+M+
Sbjct: 204 LELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMIS 263
Query: 230 GMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPP 289
G+ D YT++ +I GLC G +D+AE + ++E
Sbjct: 264 GLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASI 323
Query: 290 NRCSYNVFVHGLLRKLDISRSEKYLQIMKCK 320
+ +YN + G R I S + +IM+ K
Sbjct: 324 DVVTYNTMLGGFCRCGKIKESLELWRIMEHK 354
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 144/316 (45%), Gaps = 1/316 (0%)
Query: 10 TIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVM 69
IVSYN LI+GL + G+ E + M KG D T+ I + G G V+ A VM
Sbjct: 358 NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVM 417
Query: 70 GFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKV 129
+ G +V Y S+I C + ++EEA + M + G + N+LI G +
Sbjct: 418 QEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRD 477
Query: 130 KDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTC 189
+ A L EM G +P VV++ L+ G C+ GK A M E+G P+L+T
Sbjct: 478 SRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTY 537
Query: 190 TVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXX 249
+++L GL + R A+ L+ +S ++ D++++N+++ G+C
Sbjct: 538 SILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEH 597
Query: 250 XXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISR 309
+ T+N ++ G G + A + M + G P+ SYN + GL +S
Sbjct: 598 RNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSY 657
Query: 310 SEKYLQIMKCKG-FPV 324
+ ++ + G FP
Sbjct: 658 AMEFFDDARNHGIFPT 673
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 135/294 (45%), Gaps = 1/294 (0%)
Query: 8 QPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARC 67
+ + +Y+ LI GL G + + E+ ++ DV T++ ++ GF + G + +
Sbjct: 287 EKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLE 346
Query: 68 VMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWC 127
+ M H N+V+YN LI G +++EA ++ LM +G TY IHG C
Sbjct: 347 LWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLC 405
Query: 128 KVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQ 187
V++A+ ++ E+ + G DV + +++ C+ + A L M +HG N
Sbjct: 406 VNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSH 465
Query: 188 TCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXX 247
C ++ GL + EA R M K+ +V YN+++ G+C
Sbjct: 466 VCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEM 525
Query: 248 XXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGL 301
D T++I++ GLC + +D A EL + ++G + +N+ +HGL
Sbjct: 526 LENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGL 579
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 133/301 (44%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
+KG +Y I GL G + G++ E+ G DV ++ ++D K+ +
Sbjct: 387 AKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLE 446
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A ++ M GVE N N+LIGG ++ EA M + GC P+VV+YN LI
Sbjct: 447 EASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILI 506
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
G CK A + EM+ G KPD+ T++ L+ G C+ K A EL+ + G
Sbjct: 507 CGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLE 566
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXX 243
++ +++ GL +AM++ ME + ++V YN +++G
Sbjct: 567 TDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVI 626
Query: 244 XXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLR 303
D ++N +++GLC + A E +G P ++N+ V ++
Sbjct: 627 WGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVVN 686
Query: 304 K 304
+
Sbjct: 687 R 687
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 158/334 (47%), Gaps = 2/334 (0%)
Query: 15 NCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVH 74
N L+ L K R ++ L E ++ D +TF+IL+ G G A ++G M
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSG 234
Query: 75 VGVEPNVVTYNSLIGGYCLRHQMEEAMKVF-DLMVRRGCLPSVVTYNSLIHGWCKVKDVD 133
G EP++VTYN+LI G+C +++ +A ++F D+ C P VVTY S+I G+CK +
Sbjct: 235 FGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMR 294
Query: 134 RAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVIL 193
A LL +M+ G+ P VT+ LV G+ + G+ L A+E+ M G P++ T T ++
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLI 354
Query: 194 DGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXX 253
DG + S+ L+ M + + Y+++++ +C
Sbjct: 355 DGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDII 414
Query: 254 FDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKY 313
+ +N +I G C G ++EA ++ ME+ C P++ ++ + + G K + +
Sbjct: 415 PQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSI 474
Query: 314 LQIMKCKGFPVDANT-TELLICIYSANKGDNAFQ 346
M G D T + LL C+ A A+
Sbjct: 475 FHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYH 508
Score = 124 bits (311), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 115/228 (50%), Gaps = 1/228 (0%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGV-MPDVQTFSILVDGFGKEGLVSG 64
G +P IV+YN LIQG K + + + ++ V PDV T++ ++ G+ K G +
Sbjct: 236 GCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMRE 295
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A ++ M+ +G+ P VT+N L+ GY +M A ++ M+ GC P VVT+ SLI
Sbjct: 296 ASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLID 355
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G+C+V V + L EM G+ P+ T++ L+ C + L A+EL + +P
Sbjct: 356 GYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIP 415
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMC 232
++DG K +EA + MEK D + + +++ G C
Sbjct: 416 QPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHC 463
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 118/213 (55%), Gaps = 2/213 (0%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
+K+ P +V+Y +I G K G+ +E + LL +M++ G+ P TF++LVDG+ K G
Sbjct: 267 VKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAG 326
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
+ A + G M+ G P+VVT+ SLI GYC Q+ + ++++ M RG P+ TY+
Sbjct: 327 EMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYS 386
Query: 121 SLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEH 180
LI+ C + +A LLG++ ++ + P + ++ GFC+ GK A + M++
Sbjct: 387 ILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKK 446
Query: 181 GQVPNLQTCTVILDG-LFKCRFHSEAMSLFRAM 212
P+ T T+++ G K R EA+S+F M
Sbjct: 447 KCKPDKITFTILIIGHCMKGRMF-EAVSIFHKM 478
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 147/317 (46%), Gaps = 7/317 (2%)
Query: 7 IQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQK-GVMPDVQTFSILVDGFGKEGLVSGA 65
I+ + +YN L + L K G + AG ++E M+ GV P+ + LV F ++G + A
Sbjct: 99 IRHSFWTYNLLTRSLCKAG-LHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFA 157
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ + VE + NSL+ ++E+AMK+FD +R T+N LI G
Sbjct: 158 TALL--LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRG 215
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV-- 183
C V ++A+ LLG M G +PD+VT+ L+ GFC+ + A E+F +K G V
Sbjct: 216 LCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKS-GSVCS 274
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXX 243
P++ T T ++ G K EA SL M + I V +NV++DG
Sbjct: 275 PDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEI 334
Query: 244 XXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLR 303
D TF +I G C G + + L M G PN +Y++ ++ L
Sbjct: 335 RGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCN 394
Query: 304 KLDISRSEKYLQIMKCK 320
+ + ++ + L + K
Sbjct: 395 ENRLLKARELLGQLASK 411
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 85/170 (50%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
S G P +V++ LI G + G+ +G L EM +G+ P+ T+SIL++ E +
Sbjct: 340 SFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLL 399
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
AR ++G + + P YN +I G+C ++ EA + + M ++ C P +T+ LI
Sbjct: 400 KARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILI 459
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKEL 173
G C + A+ + +MV G PD +T ++L+ + G A L
Sbjct: 460 IGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 78/150 (52%), Gaps = 1/150 (0%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
N++G+ P +Y+ LI L R + LL ++ K ++P ++ ++DGF K G V
Sbjct: 374 NARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKV 433
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
+ A ++ M +P+ +T+ LI G+C++ +M EA+ +F MV GC P +T +SL
Sbjct: 434 NEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSL 493
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVV 152
+ K A L ++ +G +VV
Sbjct: 494 LSCLLKAGMAKEAY-HLNQIARKGQSNNVV 522
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 158/334 (47%), Gaps = 2/334 (0%)
Query: 15 NCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVH 74
N L+ L K R ++ L E ++ D +TF+IL+ G G A ++G M
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSG 234
Query: 75 VGVEPNVVTYNSLIGGYCLRHQMEEAMKVF-DLMVRRGCLPSVVTYNSLIHGWCKVKDVD 133
G EP++VTYN+LI G+C +++ +A ++F D+ C P VVTY S+I G+CK +
Sbjct: 235 FGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMR 294
Query: 134 RAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVIL 193
A LL +M+ G+ P VT+ LV G+ + G+ L A+E+ M G P++ T T ++
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLI 354
Query: 194 DGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXX 253
DG + S+ L+ M + + Y+++++ +C
Sbjct: 355 DGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDII 414
Query: 254 FDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKY 313
+ +N +I G C G ++EA ++ ME+ C P++ ++ + + G K + +
Sbjct: 415 PQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSI 474
Query: 314 LQIMKCKGFPVDANT-TELLICIYSANKGDNAFQ 346
M G D T + LL C+ A A+
Sbjct: 475 FHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYH 508
Score = 124 bits (311), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 115/228 (50%), Gaps = 1/228 (0%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGV-MPDVQTFSILVDGFGKEGLVSG 64
G +P IV+YN LIQG K + + + ++ V PDV T++ ++ G+ K G +
Sbjct: 236 GCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMRE 295
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A ++ M+ +G+ P VT+N L+ GY +M A ++ M+ GC P VVT+ SLI
Sbjct: 296 ASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLID 355
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G+C+V V + L EM G+ P+ T++ L+ C + L A+EL + +P
Sbjct: 356 GYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIP 415
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMC 232
++DG K +EA + MEK D + + +++ G C
Sbjct: 416 QPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHC 463
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 118/213 (55%), Gaps = 2/213 (0%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
+K+ P +V+Y +I G K G+ +E + LL +M++ G+ P TF++LVDG+ K G
Sbjct: 267 VKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAG 326
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
+ A + G M+ G P+VVT+ SLI GYC Q+ + ++++ M RG P+ TY+
Sbjct: 327 EMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYS 386
Query: 121 SLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEH 180
LI+ C + +A LLG++ ++ + P + ++ GFC+ GK A + M++
Sbjct: 387 ILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKK 446
Query: 181 GQVPNLQTCTVILDG-LFKCRFHSEAMSLFRAM 212
P+ T T+++ G K R EA+S+F M
Sbjct: 447 KCKPDKITFTILIIGHCMKGRMF-EAVSIFHKM 478
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 147/317 (46%), Gaps = 7/317 (2%)
Query: 7 IQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQK-GVMPDVQTFSILVDGFGKEGLVSGA 65
I+ + +YN L + L K G + AG ++E M+ GV P+ + LV F ++G + A
Sbjct: 99 IRHSFWTYNLLTRSLCKAG-LHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFA 157
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ + VE + NSL+ ++E+AMK+FD +R T+N LI G
Sbjct: 158 TALL--LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRG 215
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV-- 183
C V ++A+ LLG M G +PD+VT+ L+ GFC+ + A E+F +K G V
Sbjct: 216 LCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKS-GSVCS 274
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXX 243
P++ T T ++ G K EA SL M + I V +NV++DG
Sbjct: 275 PDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEI 334
Query: 244 XXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLR 303
D TF +I G C G + + L M G PN +Y++ ++ L
Sbjct: 335 RGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCN 394
Query: 304 KLDISRSEKYLQIMKCK 320
+ + ++ + L + K
Sbjct: 395 ENRLLKARELLGQLASK 411
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 85/170 (50%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
S G P +V++ LI G + G+ +G L EM +G+ P+ T+SIL++ E +
Sbjct: 340 SFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLL 399
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
AR ++G + + P YN +I G+C ++ EA + + M ++ C P +T+ LI
Sbjct: 400 KARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILI 459
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKEL 173
G C + A+ + +MV G PD +T ++L+ + G A L
Sbjct: 460 IGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 78/150 (52%), Gaps = 1/150 (0%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
N++G+ P +Y+ LI L R + LL ++ K ++P ++ ++DGF K G V
Sbjct: 374 NARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKV 433
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
+ A ++ M +P+ +T+ LI G+C++ +M EA+ +F MV GC P +T +SL
Sbjct: 434 NEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSL 493
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVV 152
+ K A L ++ +G +VV
Sbjct: 494 LSCLLKAGMAKEAY-HLNQIARKGQSNNVV 522
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 140 bits (354), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 155/348 (44%), Gaps = 37/348 (10%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVM-------------------- 43
S +QP +V+YN LI G F+ G E L+ +M GV
Sbjct: 338 SLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKRE 397
Query: 44 ----------------PDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSL 87
PD+ T+ L+ + K G +SGA +M M G++ N +T N++
Sbjct: 398 AVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTI 457
Query: 88 IGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGL 147
+ C +++EA + + +RG + VTY +LI G+ + + V++A+ + EM +
Sbjct: 458 LDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKI 517
Query: 148 KPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMS 207
P V T+ +L+GG C GK A E F + E G +P+ T I+ G K +A
Sbjct: 518 TPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFE 577
Query: 208 LFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLC 267
+ K D N++L+G+C DT T+N MI C
Sbjct: 578 FYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEERE-VDTVTYNTMISAFC 636
Query: 268 WEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQ 315
+ L EA +LL MEE G P+R +YN F+ L+ +S +++ L+
Sbjct: 637 KDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLK 684
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 151/324 (46%), Gaps = 7/324 (2%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQK-GVMPDVQTFSILVDGFGKEGLVSG 64
G+ + ++N L+ G G+ ++ G+L M+ + V PD T++ ++ K+G +S
Sbjct: 199 GVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSD 258
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
+ ++ M G+ PN VTYN+L+ GYC ++EA ++ +LM + LP + TYN LI+
Sbjct: 259 LKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILIN 318
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G C + + L+ M + L+PDVVT+ L+ G ++G L A++L M+ G
Sbjct: 319 GLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKA 378
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDI---DLDIVVYNVMLDGMCXXXXXXXXX 241
N T + L L C+ + E D+ DIV Y+ ++
Sbjct: 379 NQVTHNISLKWL--CKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGAL 436
Query: 242 XXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGL 301
+T T N ++ LC E LDEA LL + G + +Y + G
Sbjct: 437 EMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGF 496
Query: 302 LRKLDISRS-EKYLQIMKCKGFPV 324
R+ + ++ E + ++ K K P
Sbjct: 497 FREEKVEKALEMWDEMKKVKITPT 520
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 150/330 (45%), Gaps = 3/330 (0%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+ P V+YN L+ G K G KE ++ M Q V+PD+ T++IL++G G +
Sbjct: 270 GLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREG 329
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQME-EAMKVFDLMVRRGCLPSVVTYNSLIH 124
+M M + ++P+VVTYN+LI G C + EA K+ + M G + VT+N +
Sbjct: 330 LELMDAMKSLKLQPDVVTYNTLIDG-CFELGLSLEARKLMEQMENDGVKANQVTHNISLK 388
Query: 125 GWCKVKDVDRAICLLGEMVN-EGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
CK + + + E+V+ G PD+VT+ L+ + +VG A E+ M + G
Sbjct: 389 WLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIK 448
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXX 243
N T ILD L K R EA +L + K +D V Y ++ G
Sbjct: 449 MNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEM 508
Query: 244 XXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLR 303
TFN +I GLC G + A E + E+G P+ ++N + G +
Sbjct: 509 WDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCK 568
Query: 304 KLDISRSEKYLQIMKCKGFPVDANTTELLI 333
+ + ++ ++ F D T +L+
Sbjct: 569 EGRVEKAFEFYNESIKHSFKPDNYTCNILL 598
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 151/311 (48%), Gaps = 7/311 (2%)
Query: 32 GLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGG- 90
LL+ + P F I + + EG A + M+ + ++PN++T N+L+ G
Sbjct: 117 SLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGL 176
Query: 91 --YCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNE-GL 147
Y + A +VFD MV+ G +V T+N L++G+C ++ A+ +L MV+E +
Sbjct: 177 VRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKV 236
Query: 148 KPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMS 207
PD VT+ ++ + G+ KEL MK++G VPN T ++ G K EA
Sbjct: 237 NPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQ 296
Query: 208 LFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLC 267
+ M+++++ D+ YN++++G+C D T+N +I G C
Sbjct: 297 IVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDG-C 355
Query: 268 WE-GLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISR-SEKYLQIMKCKGFPVD 325
+E GL EA +L+ +ME +G N+ ++N+ + L ++ + K +++ GF D
Sbjct: 356 FELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPD 415
Query: 326 ANTTELLICIY 336
T LI Y
Sbjct: 416 IVTYHTLIKAY 426
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 155/328 (47%), Gaps = 11/328 (3%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDG---FGKEGLVSGA 65
P+ ++ + G+ + +M++ + P++ T + L+ G + +S A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRR-GCLPSVVTYNSLIH 124
R V MV +GV NV T+N L+ GYCL ++E+A+ + + MV P VTYN+++
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
K + LL +M GL P+ VT+ LV G+C++G A ++ MK+ +P
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
+L T ++++GL E + L AM+ + D+V YN ++DG
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM 368
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEE----NGCPPNRCSYNVFVHG 300
+ T NI ++ LC E ++ E + +++E +G P+ +Y+ +
Sbjct: 369 EQMENDGVKANQVTHNISLKWLCKE---EKREAVTRKVKELVDMHGFSPDIVTYHTLIKA 425
Query: 301 LLRKLDISRSEKYLQIMKCKGFPVDANT 328
L+ D+S + + ++ M KG ++ T
Sbjct: 426 YLKVGDLSGALEMMREMGQKGIKMNTIT 453
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 153/332 (46%), Gaps = 1/332 (0%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
S G+ + LI K G ++ M + PDV T+++++ +E +
Sbjct: 119 KSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVF 178
Query: 63 SG-ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNS 121
A V M+ PN+ T+ L+ G + + +A K+FD M RG P+ VTY
Sbjct: 179 FMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTI 238
Query: 122 LIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHG 181
LI G C+ D A L EM G PD V AL+ GFC++G+ + A EL ++ G
Sbjct: 239 LISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDG 298
Query: 182 QVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXX 241
V L+ + ++DGLF+ R +++A L+ M K +I DI++Y +++ G+
Sbjct: 299 FVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDAL 358
Query: 242 XXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGL 301
DTY +N +I+ LC GLL+E L + M E P+ C++ + + +
Sbjct: 359 KLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSM 418
Query: 302 LRKLDISRSEKYLQIMKCKGFPVDANTTELLI 333
R + +E+ ++ G T LI
Sbjct: 419 CRNGLVREAEEIFTEIEKSGCSPSVATFNALI 450
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 152/347 (43%), Gaps = 5/347 (1%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+GI P V+Y LI GL + G + L YEM G PD + L+DGF K G +
Sbjct: 227 RGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVE 286
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A ++ G + Y+SLI G + +A +++ M+++ P ++ Y LI
Sbjct: 287 AFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQ 346
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G K ++ A+ LL M ++G+ PD + A++ C G + L M E P
Sbjct: 347 GLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFP 406
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
+ T T+++ + + EA +F +EKS + +N ++DG+C
Sbjct: 407 DACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLL 466
Query: 245 XXXX----XXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHG 300
+++ N + G + +A L + G P+ SYNV ++G
Sbjct: 467 HKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLING 526
Query: 301 LLRKLDISRSEKYLQIMKCKGFPVDANTTELLIC-IYSANKGDNAFQ 346
R DI + K L +++ KG D+ T LI ++ + + AF+
Sbjct: 527 FCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFK 573
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 142/322 (44%), Gaps = 7/322 (2%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
+ G P V++N L+ G K GR E LL + G + ++ +S L+DG +
Sbjct: 260 QTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRY 319
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
+ A + M+ ++P+++ Y LI G ++E+A+K+ M +G P YN++
Sbjct: 320 TQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAV 379
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
I C ++ L EM PD T T L+ C+ G A+E+F +++ G
Sbjct: 380 IKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGC 439
Query: 183 VPNLQTCTVILDGLFKCRFHSEAMSLFRAME---KSDIDLDIVVY-NVMLDGMCXXXXXX 238
P++ T ++DGL K EA L ME + + L + N D M
Sbjct: 440 SPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSIL 499
Query: 239 XXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFV 298
D ++N++I G C G +D A +LL ++ G P+ +YN +
Sbjct: 500 KAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLI 559
Query: 299 HGLLRKLDISRSEKYLQIMKCK 320
+GL R + R E+ ++ K
Sbjct: 560 NGLHR---VGREEEAFKLFYAK 578
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 100/220 (45%), Gaps = 39/220 (17%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
SKGI P YN +I+ L G +EG L EM + PD T +IL+ + GLV
Sbjct: 366 SKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVR 425
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYC----------LRHQME-------------EA 100
A + + G P+V T+N+LI G C L H+ME
Sbjct: 426 EAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSG 485
Query: 101 MKVFDLMVRRGCL----------------PSVVTYNSLIHGWCKVKDVDRAICLLGEMVN 144
+ FD MV G + P +V+YN LI+G+C+ D+D A+ LL +
Sbjct: 486 NRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQL 545
Query: 145 EGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
+GL PD VT+ L+ G +VG+ A +LF+ + P
Sbjct: 546 KGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSP 585
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 166/386 (43%), Gaps = 43/386 (11%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG-LVS 63
KG P IV YN +I G K G + + E+ KG MP ++TF +++GF KEG V+
Sbjct: 234 KGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVA 293
Query: 64 GARCV----------------------------------MGFMVHVGVEPNVVTYNSLIG 89
R + +G+++ +P+V TYN LI
Sbjct: 294 SDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILIN 353
Query: 90 GYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKP 149
C + E A+ D ++G +P+ ++Y LI +CK K+ D A LL +M G KP
Sbjct: 354 RLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKP 413
Query: 150 DVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLF 209
D+VT+ L+ G G A + + + G P+ +++ GL K A LF
Sbjct: 414 DIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLF 473
Query: 210 RAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWE 269
M +I D VY ++DG D N MI+G C
Sbjct: 474 SEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRS 533
Query: 270 GLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEK---YLQIMKCKGFPVDA 326
G+LDEA + RM E P++ +Y+ + G +++ D++ + K Y++ KCK P
Sbjct: 534 GMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCK--PNVV 591
Query: 327 NTTELL---ICIYSANKGDNAFQELQ 349
T L+ C + F+E+Q
Sbjct: 592 TYTSLINGFCCQGDFKMAEETFKEMQ 617
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 140/303 (46%), Gaps = 1/303 (0%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
+ KG+ P +SY LIQ K + + LL +M ++G PD+ T+ IL+ G G +
Sbjct: 372 SKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHM 431
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
A + ++ GV P+ YN L+ G C + A +F M+ R LP Y +L
Sbjct: 432 DDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATL 491
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
I G+ + D D A + V +G+K DVV A++ GFC+ G A M E
Sbjct: 492 IDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHL 551
Query: 183 VPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXX 242
VP+ T + I+DG K + + A+ +FR MEK+ ++V Y +++G C
Sbjct: 552 VPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEE 611
Query: 243 XXXXXXXXXXXFDTYTFNIMIRGLCWE-GLLDEAEELLMRMEENGCPPNRCSYNVFVHGL 301
+ T+ +IR L E L++A M N C PN ++N + G
Sbjct: 612 TFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGF 671
Query: 302 LRK 304
++K
Sbjct: 672 VKK 674
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 151/329 (45%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G++ ++ N +I ++ G + A + ++ PDV T++IL++ KEG
Sbjct: 304 RGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEV 363
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A + G+ PN ++Y LI YC + + A K+ M RGC P +VTY LIH
Sbjct: 364 AVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIH 423
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G +D A+ + ++++ G+ PD + L+ G C+ G+ L AK LF M + +P
Sbjct: 424 GLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILP 483
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
+ ++DG + EA +F + + +D+V +N M+ G C
Sbjct: 484 DAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACM 543
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
D +T++ +I G + + A ++ ME+N C PN +Y ++G +
Sbjct: 544 NRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQ 603
Query: 305 LDISRSEKYLQIMKCKGFPVDANTTELLI 333
D +E+ + M+ + + T LI
Sbjct: 604 GDFKMAEETFKEMQLRDLVPNVVTYTTLI 632
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 139/352 (39%), Gaps = 35/352 (9%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCV 68
P +++ N L+ L K R + + EM +G D + ILV G EG V R +
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
+ G PN+V YN++IGGYC +E A VF + +G +P++ T+ ++I+G+CK
Sbjct: 228 IEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCK 287
Query: 129 VKDVDRAICLLGEMVNEGL-----------------------------------KPDVVT 153
D + LL E+ GL KPDV T
Sbjct: 288 EGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVAT 347
Query: 154 WTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAME 213
+ L+ C+ GK A + G +PN + ++ K + + A L M
Sbjct: 348 YNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMA 407
Query: 214 KSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLD 273
+ DIV Y +++ G+ D +N+++ GLC G
Sbjct: 408 ERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFL 467
Query: 274 EAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVD 325
A+ L M + P+ Y + G +R D + K + KG VD
Sbjct: 468 PAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVD 519
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 122/260 (46%)
Query: 43 MPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMK 102
+PDV + L+ K + AR V M G + + L+ G C ++E K
Sbjct: 167 VPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRK 226
Query: 103 VFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFC 162
+ + +GC+P++V YN++I G+CK+ D++ A + E+ +G P + T+ ++ GFC
Sbjct: 227 LIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFC 286
Query: 163 QVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIV 222
+ G +A+ L +KE G ++ I+D ++ + + + +D D+
Sbjct: 287 KEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVA 346
Query: 223 VYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRM 282
YN++++ +C + ++ +I+ C D A +LL++M
Sbjct: 347 TYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQM 406
Query: 283 EENGCPPNRCSYNVFVHGLL 302
E GC P+ +Y + +HGL+
Sbjct: 407 AERGCKPDIVTYGILIHGLV 426
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 102/256 (39%), Gaps = 85/256 (33%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KG++ +V +N +I+G + G E + M ++ ++PD T+S ++DG+ K+ ++
Sbjct: 514 KGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMAT 573
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLR------------------------------ 94
A + +M +PNVVTY SLI G+C +
Sbjct: 574 AIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIR 633
Query: 95 ------HQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK-------------------- 128
+E+A+ ++LM+ C+P+ VT+N L+ G+ K
Sbjct: 634 SLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSL 693
Query: 129 ----------------------------VKDVDRAICLLGE-MVNEGLKPDVVTWTALVG 159
V + + C+ + MV +G PD V++ A++
Sbjct: 694 FSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILH 753
Query: 160 GFCQVGKPLAAKELFF 175
GFC VG + + F
Sbjct: 754 GFCVVGNSKQWRNMDF 769
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 69/156 (44%), Gaps = 19/156 (12%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYE-MMQKGVMPDVQTFSILVDGFGK----- 58
+ + P +V+Y LI+ L K E A +E MM +P+ TF+ L+ GF K
Sbjct: 619 RDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGK 678
Query: 59 -----EGLVSGARCVMGFMVHV----GVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVR 109
+G G + H G + YNS + C+ ++ A D MV+
Sbjct: 679 VLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVK 738
Query: 110 RGCLPSVVTYNSLIHGWCKVKDVDR----AICLLGE 141
+G P V++ +++HG+C V + + C LGE
Sbjct: 739 KGFSPDPVSFAAILHGFCVVGNSKQWRNMDFCNLGE 774
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 162/375 (43%), Gaps = 41/375 (10%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQT---------------- 48
+G +P +VSY LI GLF+ G+ + + M++ GV PD +
Sbjct: 143 RGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDL 202
Query: 49 --------------------FSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLI 88
++ L+ GF K G + A + +M +G EP++VTYN L+
Sbjct: 203 AYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLL 262
Query: 89 GGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAI-CLLGEMVNEGL 147
Y + ++ A V MVR G +YN L+ C+V D+ ++ EM G
Sbjct: 263 NYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGF 322
Query: 148 KPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMS 207
DVV+++ L+ FC+ A LF M++ G V N+ T T ++ + S A
Sbjct: 323 -CDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKK 381
Query: 208 LFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLC 267
L M + + D + Y +LD +C D ++N +I GLC
Sbjct: 382 LLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLC 441
Query: 268 WEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDAN 327
G + EA +L M+ C P+ ++ + GL+R +S + K M KGF +D +
Sbjct: 442 RSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRD 501
Query: 328 TTELLI---CIYSAN 339
++ LI C SA+
Sbjct: 502 VSDTLIKASCSMSAD 516
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 137/314 (43%), Gaps = 1/314 (0%)
Query: 13 SYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFM 72
+Y+ I GL K ++ LL +M G +PD+ F++ +D +E V A M
Sbjct: 81 TYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCM 140
Query: 73 VHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDV 132
V G EP+VV+Y LI G ++ +A+++++ M+R G P +L+ G C + V
Sbjct: 141 VQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKV 200
Query: 133 DRAICLLGEMVNEG-LKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTV 191
D A ++ E + +K V + AL+ GFC+ G+ A+ L M + G P+L T V
Sbjct: 201 DLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNV 260
Query: 192 ILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXX 251
+L+ + A + M +S I LD YN +L C
Sbjct: 261 LLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPR 320
Query: 252 XXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSE 311
D +++ +I C +A L M + G N +Y + LR+ + S ++
Sbjct: 321 GFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAK 380
Query: 312 KYLQIMKCKGFPVD 325
K L M G D
Sbjct: 381 KLLDQMTELGLSPD 394
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 119/277 (42%), Gaps = 1/277 (0%)
Query: 58 KEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVV 117
K G++ A V M H YN IG + E A ++ M G
Sbjct: 21 KSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPF 80
Query: 118 TYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTM 177
TY+ I G CKVK D LL +M G PD+ + + C+ K A + FF M
Sbjct: 81 TYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCM 140
Query: 178 KEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXX 237
+ G+ P++ + T++++GLF+ ++A+ ++ AM +S + D ++ G+C
Sbjct: 141 VQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKV 200
Query: 238 -XXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNV 296
T +N +I G C G +++AE L M + GC P+ +YNV
Sbjct: 201 DLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNV 260
Query: 297 FVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLI 333
++ + R+E + M G +DA + L+
Sbjct: 261 LLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLL 297
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 148/319 (46%), Gaps = 4/319 (1%)
Query: 6 GIQPTIVSYNCLIQGLFKFGR-WKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
G +PT+++YN ++ K G W + L+ +M G+ PD T++ L+ + L
Sbjct: 238 GCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQE 297
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A V M G + VTYN+L+ Y H+ +EAMKV + MV G PS+VTYNSLI
Sbjct: 298 AAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLIS 357
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
+ + +D A+ L +M +G KPDV T+T L+ GF + GK +A +F M+ G P
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKP 417
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
N+ T + +E M +F + + DIV +N +L
Sbjct: 418 NICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVF 477
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
+ TFN +I G ++A + RM + G P+ +YN + L R
Sbjct: 478 KEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARG 537
Query: 305 LDISRSEKYLQIM---KCK 320
+SEK L M +CK
Sbjct: 538 GMWEQSEKVLAEMEDGRCK 556
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 137/297 (46%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
S GI P +YN LI + +E A + EM G D T++ L+D +GK
Sbjct: 272 SDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPK 331
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A V+ MV G P++VTYNSLI Y ++EAM++ + M +G P V TY +L+
Sbjct: 332 EAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLL 391
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
G+ + V+ A+ + EM N G KP++ T+ A + + GK ++F + G
Sbjct: 392 SGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLS 451
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXX 243
P++ T +L + SE +F+ M+++ + +N ++
Sbjct: 452 PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTV 511
Query: 244 XXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHG 300
D T+N ++ L G+ +++E++L ME+ C PN +Y +H
Sbjct: 512 YRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 135/330 (40%), Gaps = 35/330 (10%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+ P IV++N L+ + G E +G+ EM + G +P+ +TF+ L+ + + G A
Sbjct: 449 GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
V M+ GV P++ TYN+++ E++ KV M C P+ +TY SL+H
Sbjct: 509 MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Query: 126 WCKVKDV----------------DRAICL-------------------LGEMVNEGLKPD 150
+ K++ RA+ L E+ G PD
Sbjct: 569 YANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPD 628
Query: 151 VVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFR 210
+ T ++V + + A + MKE G P++ T ++ + ++ + R
Sbjct: 629 ITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILR 688
Query: 211 AMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEG 270
+ I DI+ YN ++ C D T+N I +
Sbjct: 689 EILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADS 748
Query: 271 LLDEAEELLMRMEENGCPPNRCSYNVFVHG 300
+ +EA ++ M ++GC PN+ +YN V G
Sbjct: 749 MFEEAIGVVRYMIKHGCRPNQNTYNSIVDG 778
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/412 (22%), Positives = 154/412 (37%), Gaps = 73/412 (17%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G P+IV+YN LI + G E L +M +KG PDV T++ L+ GF + G V A
Sbjct: 344 GFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESA 403
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDL------------------- 106
+ M + G +PN+ T+N+ I Y R + E MK+FD
Sbjct: 404 MSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAV 463
Query: 107 ----------------MVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPD 150
M R G +P T+N+LI + + ++A+ + M++ G+ PD
Sbjct: 464 FGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPD 523
Query: 151 VVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN-LQTCT------------------- 190
+ T+ ++ + G ++++ M++ PN L C+
Sbjct: 524 LSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAE 583
Query: 191 -----------VILDGLF----KCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXX 235
V+L L KC EA F +++ DI N M+
Sbjct: 584 EVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQ 643
Query: 236 XXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYN 295
T+N ++ ++EE+L + G P+ SYN
Sbjct: 644 MVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYN 703
Query: 296 VFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLICIYSANKGDNAFQE 347
++ R + + + M+ G D T I Y+A D+ F+E
Sbjct: 704 TVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAA---DSMFEE 752
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 118/262 (45%), Gaps = 35/262 (13%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGF--GKE---- 59
G+ P + +YN ++ L + G W++ +L EM P+ T+ L+ + GKE
Sbjct: 519 GVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLM 578
Query: 60 ---------GLVSGARCVMGFMVHV--------------------GVEPNVVTYNSLIGG 90
G++ ++ +V V G P++ T NS++
Sbjct: 579 HSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSI 638
Query: 91 YCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPD 150
Y R + +A V D M RG PS+ TYNSL++ + D ++ +L E++ +G+KPD
Sbjct: 639 YGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPD 698
Query: 151 VVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFR 210
++++ ++ +C+ + A +F M+ G VP++ T + EA+ + R
Sbjct: 699 IISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVR 758
Query: 211 AMEKSDIDLDIVVYNVMLDGMC 232
M K + YN ++DG C
Sbjct: 759 YMIKHGCRPNQNTYNSIVDGYC 780
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 133/314 (42%), Gaps = 7/314 (2%)
Query: 43 MPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMK 102
M D +I++ GKEG VS A + + G +V +Y SLI + + EA+
Sbjct: 170 MLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVN 229
Query: 103 VFDLMVRRGCLPSVVTYNSLIHGWCKVKDV-DRAICLLGEMVNEGLKPDVVTWTALVGGF 161
VF M GC P+++TYN +++ + K+ ++ L+ +M ++G+ PD T+ L+
Sbjct: 230 VFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI-TC 288
Query: 162 CQVGK-PLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLD 220
C+ G A ++F MK G + T +LD K EAM + M +
Sbjct: 289 CKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPS 348
Query: 221 IVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLM 280
IV YN ++ D +T+ ++ G G ++ A +
Sbjct: 349 IVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFE 408
Query: 281 RMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLICIYSANK 340
M GC PN C++N F+ + + K + G D T L+ ++ N
Sbjct: 409 EMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNG 468
Query: 341 GDN----AFQELQQ 350
D+ F+E+++
Sbjct: 469 MDSEVSGVFKEMKR 482
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 96/199 (48%)
Query: 7 IQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGAR 66
I+P V L+ K E E+ ++G PD+ T + +V +G+ +V+ A
Sbjct: 590 IEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKAN 649
Query: 67 CVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGW 126
V+ +M G P++ TYNSL+ + ++ ++ ++ +G P +++YN++I+ +
Sbjct: 650 GVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAY 709
Query: 127 CKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNL 186
C+ + A + EM N G+ PDV+T+ +G + A + M +HG PN
Sbjct: 710 CRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQ 769
Query: 187 QTCTVILDGLFKCRFHSEA 205
T I+DG K EA
Sbjct: 770 NTYNSIVDGYCKLNRKDEA 788
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 78/140 (55%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G P++ +YN L+ + + + +L E++ KG+ PD+ +++ ++ + + +
Sbjct: 658 RGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRD 717
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A + M + G+ P+V+TYN+ IG Y EEA+ V M++ GC P+ TYNS++
Sbjct: 718 ASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVD 777
Query: 125 GWCKVKDVDRAICLLGEMVN 144
G+CK+ D A + ++ N
Sbjct: 778 GYCKLNRKDEAKLFVEDLRN 797
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 88/167 (52%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G P I + N ++ + + G+L M ++G P + T++ L+ +
Sbjct: 623 RGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGK 682
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
+ ++ ++ G++P++++YN++I YC +M +A ++F M G +P V+TYN+ I
Sbjct: 683 SEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIG 742
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAK 171
+ + AI ++ M+ G +P+ T+ ++V G+C++ + AK
Sbjct: 743 SYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAK 789
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 57/97 (58%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
+KGI+P I+SYN +I + R ++ + + EM G++PDV T++ + + + +
Sbjct: 692 AKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFE 751
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEA 100
A V+ +M+ G PN TYNS++ GYC ++ +EA
Sbjct: 752 EAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA 788
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 148/311 (47%), Gaps = 4/311 (1%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCV 68
P +VSYN L+ G K G++ E + L ++ + P + T++ L+DG + G + GA+ +
Sbjct: 372 PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRL 431
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
M + P+V+TY +L+ G+ + A +V+D M+R+G P Y + G +
Sbjct: 432 KEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELR 491
Query: 129 VKDVDRAICLLGEMV-NEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQ 187
+ D D+A L EMV + PD+ + + G C+VG + A E + G VP+
Sbjct: 492 LGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHV 551
Query: 188 TCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXX 247
T T ++ G + A +L+ M + + ++ Y V++ G
Sbjct: 552 TYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEM 611
Query: 248 XXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDI 307
+ T N ++ G+C G +DEA L +MEE G PPN+ SY + + + D
Sbjct: 612 KKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLIS---KNCDF 668
Query: 308 SRSEKYLQIMK 318
+ E+ +++ K
Sbjct: 669 EKWEEVVKLYK 679
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 158/365 (43%), Gaps = 40/365 (10%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G T S+N LI+G K G + + G+ EM+ G+ P T++I + G + A
Sbjct: 303 GFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDA 362
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
R ++ M P+VV+YN+L+ GY + EA +FD + PS+VTYN+LI G
Sbjct: 363 RELLSSMA----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDG 418
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
C+ +++ A L EM + + PDV+T+T LV GF + G A E++ M G P+
Sbjct: 419 LCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPD 478
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDL-DIVVYNVMLDGMCXXXXXXXXXXXX 244
T G + +A L M +D D+ +YNV +DG+C
Sbjct: 479 GYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQ 538
Query: 245 XXXXXXXXXFDTYTFNIMIRGL-----------------------------------CWE 269
D T+ +IRG
Sbjct: 539 RKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKA 598
Query: 270 GLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTT 329
G L++A + M++ G PN ++N ++G+ + +I + +YL M+ +G P + +
Sbjct: 599 GRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSY 658
Query: 330 ELLIC 334
+LI
Sbjct: 659 TMLIS 663
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 161/377 (42%), Gaps = 33/377 (8%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+ I+ + V+YN LI G K G+ +E +M + G +F+ L++G+ K+GL
Sbjct: 267 RNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDD 326
Query: 65 ARCVMGFMVHVGV-------------------------------EPNVVTYNSLIGGYCL 93
A V M++ G+ P+VV+YN+L+ GY
Sbjct: 327 AWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIK 386
Query: 94 RHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVT 153
+ EA +FD + PS+VTYN+LI G C+ +++ A L EM + + PDV+T
Sbjct: 387 MGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVIT 446
Query: 154 WTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAME 213
+T LV GF + G A E++ M G P+ T G + +A L M
Sbjct: 447 YTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMV 506
Query: 214 KSDIDL-DIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLL 272
+D D+ +YNV +DG+C D T+ +IRG G
Sbjct: 507 ATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQF 566
Query: 273 DEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANT-TEL 331
A L M P+ +Y V ++G + + ++ +Y MK +G + T L
Sbjct: 567 KMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNAL 626
Query: 332 LICIYSANKGDNAFQEL 348
L + A D A++ L
Sbjct: 627 LYGMCKAGNIDEAYRYL 643
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 134/300 (44%), Gaps = 6/300 (2%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYE-MMQKGVMPDVQTFSILVDGFGKEGLVS 63
KG P++ + N +++ L + R A +YE M++ G+MP V TF+ ++D K G +
Sbjct: 197 KGFLPSVRNCNIVLKVL-RDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLE 255
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
+ M +E + VTYN LI G+ +MEEA + M R G + ++N LI
Sbjct: 256 RVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLI 315
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
G+CK D A + EM+N G+ P T+ + C G+ A+EL +M
Sbjct: 316 EGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM----AA 371
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXX 243
P++ + ++ G K EA LF + DI IV YN ++DG+C
Sbjct: 372 PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRL 431
Query: 244 XXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLR 303
D T+ +++G G L A E+ M G P+ +Y G LR
Sbjct: 432 KEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELR 491
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 128/297 (43%), Gaps = 5/297 (1%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
GI PT++++N ++ FK G + + EM ++ + T++IL++GF K G + A
Sbjct: 233 GIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEA 292
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
R G M G ++N LI GYC + ++A V D M+ G P+ TYN I
Sbjct: 293 RRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICA 352
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
C +D A LL M PDVV++ L+ G+ ++GK + A LF ++ P+
Sbjct: 353 LCDFGRIDDARELLSSMA----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPS 408
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+ T ++DGL + A L M I D++ Y ++ G
Sbjct: 409 IVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYD 468
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRM-EENGCPPNRCSYNVFVHGL 301
D Y + G G D+A L M + P+ YNV + GL
Sbjct: 469 EMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGL 525
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 87/170 (51%), Gaps = 3/170 (1%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+ P V+Y +I+G + G++K L EM++K + P V T+ +L+ G K G + A
Sbjct: 545 GLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQA 604
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
M GV PNV+T+N+L+ G C ++EA + M G P+ +Y LI
Sbjct: 605 FQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISK 664
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFF 175
C + + + L EM+++ ++PD T AL F + K ++E+ F
Sbjct: 665 NCDFEKWEEVVKLYKEMLDKEIEPDGYTHRAL---FKHLEKDHESREVEF 711
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 91/213 (42%), Gaps = 4/213 (1%)
Query: 91 YCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPD 150
Y + E+ + F+ M+R+G LPSV N ++ + +++A + M+ G+ P
Sbjct: 178 YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPT 237
Query: 151 VVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFR 210
V+T+ ++ + G +++ MK + T ++++G K EA
Sbjct: 238 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHG 297
Query: 211 AMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEG 270
M +S + +N +++G C T T+NI I LC G
Sbjct: 298 DMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFG 357
Query: 271 LLDEAEELLMRMEENGCPPNRCSYNVFVHGLLR 303
+D+A ELL M P+ SYN +HG ++
Sbjct: 358 RIDDARELLSSM----AAPDVVSYNTLMHGYIK 386
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 60/118 (50%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
K + P++++Y LI G K GR ++ EM ++GV P+V T + L+ G K G +
Sbjct: 579 KRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDE 638
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
A + M G+ PN +Y LI C + EE +K++ M+ + P T+ +L
Sbjct: 639 AYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRAL 696
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 151/321 (47%), Gaps = 1/321 (0%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
M KGI+P +V YN ++ + + EM++KG+ P+ T+SIL+DGF K
Sbjct: 474 MMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNK 533
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLP-SVVTY 119
A V+ M E N V YN++I G C Q +A ++ +++ S +Y
Sbjct: 534 DEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSY 593
Query: 120 NSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKE 179
NS+I G+ KV D D A+ EM G P+VVT+T+L+ GFC+ + A E+ MK
Sbjct: 594 NSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKS 653
Query: 180 HGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXX 239
+L ++DG K A +LF + + + ++ VYN ++ G
Sbjct: 654 MELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDA 713
Query: 240 XXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVH 299
D +T+ MI GL +G ++ A +L + + G P+ + V V+
Sbjct: 714 AIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVN 773
Query: 300 GLLRKLDISRSEKYLQIMKCK 320
GL +K ++ K L+ MK K
Sbjct: 774 GLSKKGQFLKASKMLEEMKKK 794
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 117/219 (53%)
Query: 12 VSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGF 71
SYN +I G K G EM + G P+V TF+ L++GF K + A +
Sbjct: 591 TSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHE 650
Query: 72 MVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKD 131
M + ++ ++ Y +LI G+C ++ M+ A +F + G +P+V YNSLI G+ +
Sbjct: 651 MKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGK 710
Query: 132 VDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTV 191
+D AI L +MVN+G+ D+ T+T ++ G + G A +L+ + + G VP+ V
Sbjct: 711 MDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMV 770
Query: 192 ILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDG 230
+++GL K +A + M+K D+ ++++Y+ ++ G
Sbjct: 771 LVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAG 809
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 140/303 (46%), Gaps = 1/303 (0%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMM-QKGVMPDVQTFSILVDGFGKEGL 61
N+ + V YN +I GL K G+ + +L ++ +K +++ ++DGF K G
Sbjct: 546 NASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGD 605
Query: 62 VSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNS 121
A M G PNVVT+ SLI G+C ++M+ A+++ M + Y +
Sbjct: 606 TDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGA 665
Query: 122 LIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHG 181
LI G+CK D+ A L E+ GL P+V + +L+ GF +GK AA +L+ M G
Sbjct: 666 LIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDG 725
Query: 182 QVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXX 241
+L T T ++DGL K + A L+ + I D +++ V+++G+
Sbjct: 726 ISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKAS 785
Query: 242 XXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGL 301
+ ++ +I G EG L+EA L M E G + +N+ V G
Sbjct: 786 KMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSGR 845
Query: 302 LRK 304
+ K
Sbjct: 846 VEK 848
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 131/305 (42%), Gaps = 4/305 (1%)
Query: 7 IQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGAR 66
I P+ V + +IQG K + + + + + I + F K+G V A
Sbjct: 411 IAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFL-LFCKQGKVDAAT 469
Query: 67 CVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGW 126
+ M G+EPNVV YN+++ +C M+ A +F M+ +G P+ TY+ LI G+
Sbjct: 470 SFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGF 529
Query: 127 CKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTM-KEHGQVPN 185
K KD A ++ +M + + V + ++ G C+VG+ AKE+ + KE +
Sbjct: 530 FKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMS 589
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+ I+DG K A+ +R M ++ ++V + +++G C
Sbjct: 590 CTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTH 649
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGL--LR 303
D + +I G C + + A L + E G PN YN + G L
Sbjct: 650 EMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLG 709
Query: 304 KLDIS 308
K+D +
Sbjct: 710 KMDAA 714
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 139/336 (41%), Gaps = 35/336 (10%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
M+ G+ + +Y +I K G +E ++ EM+ G+ V + LV+G+ K
Sbjct: 300 MRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGN 359
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
+ A + M G+ P+ V ++ ++ +C +ME+A++ + M PS V +
Sbjct: 360 ELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVH 419
Query: 121 SLIHG----------------------------------WCKVKDVDRAICLLGEMVNEG 146
++I G +CK VD A L M +G
Sbjct: 420 TMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKG 479
Query: 147 LKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAM 206
++P+VV + ++ C++ A+ +F M E G PN T ++++DG FK + A
Sbjct: 480 IEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAW 539
Query: 207 SLFRAMEKSDIDLDIVVYNVMLDGMCXX-XXXXXXXXXXXXXXXXXXXFDTYTFNIMIRG 265
+ M S+ + + V+YN +++G+C ++N +I G
Sbjct: 540 DVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDG 599
Query: 266 LCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGL 301
G D A E M ENG PN ++ ++G
Sbjct: 600 FVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGF 635
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 140/345 (40%), Gaps = 35/345 (10%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGK-EGLVSG 64
G+ V+ L++ + + +E + +M +G PD FS+ V K LV
Sbjct: 234 GVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMA 293
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
+ +GV + TY S+I + MEEA++V D MV G SV+ SL++
Sbjct: 294 LDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVN 353
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G+CK ++ +A+ L M EGL PD V ++ +V FC+ + A E + MK P
Sbjct: 354 GYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAP 413
Query: 185 NLQTCTVILDG------------LFKCRFHS----------------------EAMSLFR 210
+ ++ G +F F S A S +
Sbjct: 414 SSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLK 473
Query: 211 AMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEG 270
ME+ I+ ++V YN M+ C + +T++I+I G
Sbjct: 474 MMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNK 533
Query: 271 LLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQ 315
A +++ +M + N YN ++GL + S++++ LQ
Sbjct: 534 DEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQ 578
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 155/384 (40%), Gaps = 42/384 (10%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G + T ++N L+ + R M+ + V+P V + ++ + L+ A
Sbjct: 164 GFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEA 223
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLP----------- 114
+ + MV +GV + VT L+ + EEA+K+F ++ RG P
Sbjct: 224 KEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQA 283
Query: 115 -------------------------SVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKP 149
S TY S+I + K +++ A+ ++ EMV G+
Sbjct: 284 ACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPM 343
Query: 150 DVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLF 209
V+ T+LV G+C+ + A +LF M+E G P+ +V+++ K +A+ +
Sbjct: 344 SVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFY 403
Query: 210 RAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWE 269
M+ I V+ + M+ G C + N + C +
Sbjct: 404 MRMKSVRIAPSSVLVHTMIQG-CLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQ 462
Query: 270 GLLDEAEELLMRMEENGCPPNRCSYN--VFVHGLLRKLDISRSEKYLQIMKCKGFPVDAN 327
G +D A L ME+ G PN YN + H ++ +D++RS M KG +
Sbjct: 463 GKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARS--IFSEMLEKGLEPNNF 520
Query: 328 TTELLICIYSANKGD-NAFQELQQ 350
T +LI + NK + NA+ + Q
Sbjct: 521 TYSILIDGFFKNKDEQNAWDVINQ 544
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 154/328 (46%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G PT+V+Y CLI K G+ + + M ++GV +++T+S++++GF K + A
Sbjct: 479 GFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANA 538
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
V MV G++P+V+ YN++I +C M+ A++ M + P+ T+ +IHG
Sbjct: 539 FAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHG 598
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+ K D+ R++ + M G P V T+ L+ G + + A E+ M G N
Sbjct: 599 YAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSAN 658
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
T T I+ G +A F ++ +D+DI Y +L C
Sbjct: 659 EHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTK 718
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
+++ +NI+I G G + EA +L+ +M++ G P+ +Y F+ +
Sbjct: 719 EMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAG 778
Query: 306 DISRSEKYLQIMKCKGFPVDANTTELLI 333
D++R+ + ++ M+ G + T LI
Sbjct: 779 DMNRATQTIEEMEALGVKPNIKTYTTLI 806
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 154/347 (44%), Gaps = 1/347 (0%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+GI I Y+ ++ G K+G + + + G P V T+ L++ + K G +S
Sbjct: 443 EGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISK 502
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A V M GV+ N+ TY+ +I G+ A VF+ MV+ G P V+ YN++I
Sbjct: 503 ALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIIS 562
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
+C + ++DRAI + EM +P T+ ++ G+ + G + E+F M+ G VP
Sbjct: 563 AFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVP 622
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
+ T +++GL + R +A+ + M + + + Y ++ G
Sbjct: 623 TVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYF 682
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
D +T+ +++ C G + A + M P N YN+ + G R+
Sbjct: 683 TRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARR 742
Query: 305 LDISRSEKYLQIMKCKGFPVDANT-TELLICIYSANKGDNAFQELQQ 350
D+ + +Q MK +G D +T T + A + A Q +++
Sbjct: 743 GDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEE 789
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 150/346 (43%), Gaps = 3/346 (0%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGR-WKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGL 61
++GI PT Y LI + GR E + +M ++G+ + T+S++V GF K G
Sbjct: 336 RARGITPTSRIYTSLIHA-YAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGH 394
Query: 62 VSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNS 121
A + N Y +I +C ME A + M G + Y++
Sbjct: 395 AEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHT 454
Query: 122 LIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHG 181
++ G+ V D + + + + G P VVT+ L+ + +VGK A E+ MKE G
Sbjct: 455 MMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEG 514
Query: 182 QVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXX 241
NL+T +++++G K + + A ++F M K + D+++YN ++ C
Sbjct: 515 VKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAI 574
Query: 242 XXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGL 301
T TF +I G G + + E+ M GC P ++N ++GL
Sbjct: 575 QTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGL 634
Query: 302 LRKLDISRSEKYLQIMKCKGFPVDANT-TELLICIYSANKGDNAFQ 346
+ K + ++ + L M G + +T T+++ S AF+
Sbjct: 635 VEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFE 680
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 111/226 (49%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G PT+ ++N LI GL + + ++ +L EM GV + T++ ++ G+ G A
Sbjct: 619 GCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKA 678
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ + G++ ++ TY +L+ C +M+ A+ V M R + YN LI G
Sbjct: 679 FEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDG 738
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
W + DV A L+ +M EG+KPD+ T+T+ + + G A + M+ G PN
Sbjct: 739 WARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPN 798
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGM 231
++T T ++ G + +A+S + M+ I D VY+ +L +
Sbjct: 799 IKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSL 844
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 107/248 (43%)
Query: 78 EPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAIC 137
+P+ + ++ Y R M A + F+ M RG P+ Y SLIH + +D+D A+
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALS 365
Query: 138 LLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLF 197
+ +M EG++ +VT++ +VGGF + G AA F K + N I+
Sbjct: 366 CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHC 425
Query: 198 KCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTY 257
+ A +L R ME+ ID I +Y+ M+DG
Sbjct: 426 QTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVV 485
Query: 258 TFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIM 317
T+ +I G + +A E+ M+E G N +Y++ ++G ++ D + + + M
Sbjct: 486 TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDM 545
Query: 318 KCKGFPVD 325
+G D
Sbjct: 546 VKEGMKPD 553
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+ +Y ++QG G + + +G+ D+ T+ L+ K G + A
Sbjct: 654 GVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSA 713
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
V M + N YN LI G+ R + EA + M + G P + TY S I
Sbjct: 714 LAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISA 773
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
K D++RA + EM G+KP++ T+T L+ G+ + P A + MK G P+
Sbjct: 774 CSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPD 833
Query: 186 LQTCTVILDGLFKCRFHSEA 205
+L L +EA
Sbjct: 834 KAVYHCLLTSLLSRASIAEA 853
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 76/156 (48%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
++G+ I +Y L++ K GR + + EM + + + ++IL+DG+ + G V
Sbjct: 686 QNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDV 745
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
A ++ M GV+P++ TY S I M A + + M G P++ TY +L
Sbjct: 746 WEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTL 805
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALV 158
I GW + ++A+ EM G+KPD + L+
Sbjct: 806 IKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLL 841
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 146/324 (45%), Gaps = 1/324 (0%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G PT+ +Y LI+GL K GR E G +M++ G+ PDV + L++ GK G V
Sbjct: 298 GCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEEL 357
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGG-YCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
V M P VV+YN++I + + + E FD M PS TY+ LI
Sbjct: 358 TNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILID 417
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G+CK V++A+ LL EM +G P + +L+ + + AA ELF +KE+
Sbjct: 418 GYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNV 477
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
+ + V++ KC SEA+ LF M+ D+ YN ++ GM
Sbjct: 478 SSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLL 537
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
D + NI++ G G+ A E+ ++ +G P+ +YN +
Sbjct: 538 RKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHA 597
Query: 305 LDISRSEKYLQIMKCKGFPVDANT 328
+ + ++ MK KGF DA T
Sbjct: 598 GMFEEAARMMREMKDKGFEYDAIT 621
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 145/361 (40%), Gaps = 36/361 (9%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCV 68
P ++Y+ LI K GR L EM + P + ++ L+ + K G V A +
Sbjct: 231 PDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDL 290
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRG----------------- 111
M G P V TY LI G +++EA + M+R G
Sbjct: 291 FEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGK 350
Query: 112 ------------------CLPSVVTYNSLIHGWCKVK-DVDRAICLLGEMVNEGLKPDVV 152
C P+VV+YN++I + K V +M + + P
Sbjct: 351 VGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEF 410
Query: 153 TWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAM 212
T++ L+ G+C+ + A L M E G P +++ L K + + A LF+ +
Sbjct: 411 TYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKEL 470
Query: 213 EKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLL 272
+++ ++ VY VM+ D Y +N ++ G+ G++
Sbjct: 471 KENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMI 530
Query: 273 DEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELL 332
+EA LL +MEENGC + S+N+ ++G R R+ + + +K G D T L
Sbjct: 531 NEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTL 590
Query: 333 I 333
+
Sbjct: 591 L 591
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 110/227 (48%), Gaps = 2/227 (0%)
Query: 8 QPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKG-VMPDVQTFSILVDGFGKEGLVSGAR 66
+PT +YN +I L + G+ ++ + EM +G PD T+S L+ + K G A
Sbjct: 194 KPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAI 253
Query: 67 CVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGW 126
+ M ++P Y +L+G Y ++E+A+ +F+ M R GC P+V TY LI G
Sbjct: 254 RLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGL 313
Query: 127 CKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNL 186
K VD A +M+ +GL PDVV L+ +VG+ +F M P +
Sbjct: 314 GKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTV 373
Query: 187 QTCTVILDGLFKCRFH-SEAMSLFRAMEKSDIDLDIVVYNVMLDGMC 232
+ ++ LF+ + H SE S F M+ + Y++++DG C
Sbjct: 374 VSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYC 420
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 110/259 (42%), Gaps = 36/259 (13%)
Query: 9 PTIVSYNCLIQGLFKF-GRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARC 67
PT+VSYN +I+ LF+ E + +M V P T+SIL+DG+ K V A
Sbjct: 371 PTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALL 430
Query: 68 VMGFMVHVGVEPNVVTYNSLIG--GYCLRHQ----------------------------- 96
++ M G P Y SLI G R++
Sbjct: 431 LLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFG 490
Query: 97 ----MEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVV 152
+ EA+ +F+ M +G P V YN+L+ G K ++ A LL +M G + D+
Sbjct: 491 KCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADIN 550
Query: 153 TWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAM 212
+ ++ GF + G P A E+F T+K G P+ T +L EA + R M
Sbjct: 551 SHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREM 610
Query: 213 EKSDIDLDIVVYNVMLDGM 231
+ + D + Y+ +LD +
Sbjct: 611 KDKGFEYDAITYSSILDAV 629
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
+ KG P +Y LI L K R++ L E+ + + +++++ FGK G +
Sbjct: 436 DEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKL 495
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
S A + M + G P+V YN+L+ G + EA + M GC + ++N +
Sbjct: 496 SEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNII 555
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
++G+ + RAI + + + G+KPD VT+ L+G F G A + MK+ G
Sbjct: 556 LNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGF 615
Query: 183 VPNLQTCTVILDGLFKCRFHSEAMSLF 209
+ T + ILD + + +S F
Sbjct: 616 EYDAITYSSILDAVGNVDHEKDDVSSF 642
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 114/281 (40%), Gaps = 5/281 (1%)
Query: 73 VHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDV 132
+V V P V++ L+ + +A+ VF R C P+ TYNS+I +
Sbjct: 156 TYVSVSPAVLS--ELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQH 213
Query: 133 DRAICLLGEMVNEG-LKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTV 191
++ + EM NEG PD +T++AL+ + ++G+ +A LF MK++ P + T
Sbjct: 214 EKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTT 273
Query: 192 ILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXX 251
+L FK +A+ LF M+++ + Y ++ G+
Sbjct: 274 LLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDG 333
Query: 252 XXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLR-KLDISRS 310
D N ++ L G ++E + M C P SYN + L K +S
Sbjct: 334 LTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEV 393
Query: 311 EKYLQIMKCKGFPVDANTTELLICIY-SANKGDNAFQELQQ 350
+ MK T +LI Y N+ + A L++
Sbjct: 394 SSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEE 434
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 134 bits (337), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 155/352 (44%), Gaps = 37/352 (10%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
S+G P S+N ++ + K G+ K +++ M + G PDV +++ L+DG + G +
Sbjct: 49 SRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIR 108
Query: 64 GARCVM-------GFM-------------------------VHVGV-----EPNVVTYNS 86
A V+ GF+ V++GV PNVVTY++
Sbjct: 109 SASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYST 168
Query: 87 LIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEG 146
I +C +++ A+K F M R P+VVT+ LI G+CK D++ A+ L EM
Sbjct: 169 WIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVR 228
Query: 147 LKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAM 206
+ +VVT+TAL+ GFC+ G+ A+E++ M E PN T I+DG F+ AM
Sbjct: 229 MSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAM 288
Query: 207 SLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGL 266
M + LDI Y V++ G+C D F M+
Sbjct: 289 KFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAY 348
Query: 267 CWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMK 318
G + A + ++ E G P+ + + + G+ + + + Y I K
Sbjct: 349 FKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEK 400
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 154/318 (48%), Gaps = 5/318 (1%)
Query: 8 QPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARC 67
P +V+Y+ I K G + + M + + P+V TF+ L+DG+ K G + A
Sbjct: 160 SPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVS 219
Query: 68 VMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWC 127
+ M V + NVVTY +LI G+C + +M+ A +++ MV P+ + Y ++I G+
Sbjct: 220 LYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFF 279
Query: 128 KVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQ 187
+ D D A+ L +M+N+G++ D+ + ++ G C GK A E+ M++ VP++
Sbjct: 280 QRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMV 339
Query: 188 TCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXX 247
T +++ FK A++++ + + + D+V + M+DG+
Sbjct: 340 IFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIE 399
Query: 248 XXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDI 307
+ + ++I LC EG E E L ++ E G P++ Y ++ GL ++ ++
Sbjct: 400 KA-----NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNL 454
Query: 308 SRSEKYLQIMKCKGFPVD 325
+ K M +G +D
Sbjct: 455 VDAFKLKTRMVQEGLLLD 472
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 140/304 (46%), Gaps = 39/304 (12%)
Query: 33 LLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYC 92
L ++ +G P +F+ +V K G V A ++ M G EP+V++YNSLI G+C
Sbjct: 43 FLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHC 102
Query: 93 LRHQMEEAMKVFD-LMVRRG--CLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKP 149
+ A V + L G C P +V++NSL +G+ K+K +D +G M+ + P
Sbjct: 103 RNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVML-KCCSP 161
Query: 150 DVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLF 209
+VVT++ + FC+ G+ A + F +MK PN+ T T ++DG K A+SL+
Sbjct: 162 NVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLY 221
Query: 210 RAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWE 269
+ M + + L++V Y ++DG C +
Sbjct: 222 KEMRRVRMSLNVVTYTALIDGFCK-----------------------------------K 246
Query: 270 GLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTT 329
G + AEE+ RM E+ PN Y + G ++ D + K+L M +G +D
Sbjct: 247 GEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAY 306
Query: 330 ELLI 333
++I
Sbjct: 307 GVII 310
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 130/306 (42%), Gaps = 30/306 (9%)
Query: 11 IVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMG 70
+V+Y LI G K G + + M++ V P+ ++ ++DGF + G A +
Sbjct: 233 VVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLA 292
Query: 71 FMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVK 130
M++ G+ ++ Y +I G C +++EA ++ + M + +P +V + ++++ + K
Sbjct: 293 KMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSG 352
Query: 131 DVDRAICLLGEMVNEGLKPDVVT------------------------------WTALVGG 160
+ A+ + +++ G +PDVV +T L+
Sbjct: 353 RMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDA 412
Query: 161 FCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLD 220
C+ G + + LF + E G VP+ T + GL K +A L M + + LD
Sbjct: 413 LCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLD 472
Query: 221 IVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLM 280
++ Y ++ G+ D+ F+++IR EG + A +LL+
Sbjct: 473 LLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLL 532
Query: 281 RMEENG 286
M+ G
Sbjct: 533 DMQRRG 538
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 109/227 (48%), Gaps = 9/227 (3%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
++G++ I +Y +I GL G+ KE ++ +M + ++PD+ F+ +++ + K G +
Sbjct: 296 NQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMK 355
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSV--VTYNS 121
A + ++ G EP+VV +++I G Q+ EA+ F C+ V Y
Sbjct: 356 AAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF-------CIEKANDVMYTV 408
Query: 122 LIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHG 181
LI CK D L ++ GL PD +T+ + G C+ G + A +L M + G
Sbjct: 409 LIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEG 468
Query: 182 QVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVML 228
+ +L T ++ GL EA +F M S I D V+++++
Sbjct: 469 LLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLI 515
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 89/205 (43%), Gaps = 30/205 (14%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG-------- 60
P +V + ++ FK GR K + ++++++G PDV S ++DG K G
Sbjct: 336 PDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVY 395
Query: 61 ------------LVSGARCVMGFMVHV----------GVEPNVVTYNSLIGGYCLRHQME 98
++ A C G + V G+ P+ Y S I G C + +
Sbjct: 396 FCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLV 455
Query: 99 EAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALV 158
+A K+ MV+ G L ++ Y +LI+G + A + EM+N G+ PD + L+
Sbjct: 456 DAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLI 515
Query: 159 GGFCQVGKPLAAKELFFTMKEHGQV 183
+ + G AA +L M+ G V
Sbjct: 516 RAYEKEGNMAAASDLLLDMQRRGLV 540
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 54/111 (48%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+ P Y I GL K G + L M+Q+G++ D+ ++ L+ G +GL+ A
Sbjct: 433 GLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEA 492
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSV 116
R V M++ G+ P+ ++ LI Y M A + M RRG + +V
Sbjct: 493 RQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAV 543
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 151/328 (46%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+ P +V++N +I GL GR+ E +M+++G+ P + T+SILV G + + A
Sbjct: 290 GVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDA 349
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
V+ M G PNV+ YN+LI + + +A+++ DLMV +G + TYN+LI G
Sbjct: 350 YFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKG 409
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+CK D A LL EM++ G + ++T+++ C +A M P
Sbjct: 410 YCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPG 469
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
T ++ GL K HS+A+ L+ +D N +L G+C
Sbjct: 470 GGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQK 529
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
D ++N +I G C + LDEA L M + G P+ +Y++ + GL
Sbjct: 530 EILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMN 589
Query: 306 DISRSEKYLQIMKCKGFPVDANTTELLI 333
+ + ++ K G D T ++I
Sbjct: 590 KVEEAIQFWDDCKRNGMLPDVYTYSVMI 617
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 156/343 (45%), Gaps = 1/343 (0%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KG+ P + + I K G+ +E L +M + GV P+V TF+ ++DG G G
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 313
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A MV G+EP ++TY+ L+ G ++ +A V M ++G P+V+ YN+LI
Sbjct: 314 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 373
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
+ + +++AI + MV++GL T+ L+ G+C+ G+ A+ L M G
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 433
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
N + T ++ L A+ M ++ + ++ G+C
Sbjct: 434 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 493
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
DT T N ++ GLC G LDEA + + GC +R SYN + G K
Sbjct: 494 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK 553
Query: 305 LDISRSEKYLQIMKCKGFPVDANTTELLIC-IYSANKGDNAFQ 346
+ + +L M +G D T +LIC +++ NK + A Q
Sbjct: 554 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQ 596
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 143/301 (47%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
+KG + N L+ GL + G+ E + E++ +G + D +++ L+ G + +
Sbjct: 498 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 557
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A + MV G++P+ TY+ LI G +++EEA++ +D R G LP V TY+ +I
Sbjct: 558 EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 617
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
G CK + + EM+++ ++P+ V + L+ +C+ G+ A EL MK G
Sbjct: 618 DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 677
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXX 243
PN T T ++ G+ EA LF M ++ ++ Y ++DG
Sbjct: 678 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECL 737
Query: 244 XXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLR 303
+ T+ +MI G +G + EA LL M E G P+ +Y F++G L+
Sbjct: 738 LREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 797
Query: 304 K 304
+
Sbjct: 798 Q 798
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 151/324 (46%), Gaps = 2/324 (0%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G++PT+++Y+ L++GL + R + +L EM +KG P+V ++ L+D F + G ++
Sbjct: 324 RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNK 383
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A + MV G+ TYN+LI GYC Q + A ++ M+ G + ++ S+I
Sbjct: 384 AIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVIC 443
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
C D A+ +GEM+ + P T L+ G C+ GK A EL+F G V
Sbjct: 444 LLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVV 503
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
+ +T +L GL + EA + + + +D V YN ++ G C
Sbjct: 504 DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 563
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
D YT++I+I GL ++EA + + NG P+ +Y+V + G +
Sbjct: 564 DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA 623
Query: 305 LDISRSEKYLQIMKCKGFPVDANT 328
+++ M K V NT
Sbjct: 624 ERTEEGQEFFDEMMSKN--VQPNT 645
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 154/376 (40%), Gaps = 49/376 (13%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFS------------- 50
SKG+ T +YN LI+G K G+ LL EM+ G + +F+
Sbjct: 393 SKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFD 452
Query: 51 ----------------------ILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLI 88
L+ G K G S A + ++ G + T N+L+
Sbjct: 453 SALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALL 512
Query: 89 GGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLK 148
G C +++EA ++ ++ RGC+ V+YN+LI G C K +D A L EMV GLK
Sbjct: 513 HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLK 572
Query: 149 PDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSL 208
PD T++ L+ G + K A + + K +G +P++ T +V++DG K E
Sbjct: 573 PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEF 632
Query: 209 FRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCW 268
F M ++ + VVYN ++ C ++ T+ +I+G+
Sbjct: 633 FDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSI 692
Query: 269 EGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCK-------- 320
++EA+ L M G PN Y + G + + + E L+ M K
Sbjct: 693 ISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKIT 752
Query: 321 ------GFPVDANTTE 330
G+ D N TE
Sbjct: 753 YTVMIGGYARDGNVTE 768
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 83/167 (49%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
SK +QP V YN LI+ + GR L +M KG+ P+ T++ L+ G V
Sbjct: 638 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 697
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A+ + M G+EPNV Y +LI GY QM + + M + P+ +TY +I
Sbjct: 698 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 757
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAA 170
G+ + +V A LL EM +G+ PD +T+ + G+ + G L A
Sbjct: 758 GGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 10/125 (8%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G++P + Y LI G K G+ + LL EM K V P+ T+++++ G+ ++G V+
Sbjct: 709 EGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTE 768
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A ++ M G+ P+ +TY I GY + + EA K D Y ++I
Sbjct: 769 ASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSD----------EENYAAIIE 818
Query: 125 GWCKV 129
GW K+
Sbjct: 819 GWNKL 823
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 151/328 (46%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+ P +V++N +I GL GR+ E +M+++G+ P + T+SILV G + + A
Sbjct: 290 GVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDA 349
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
V+ M G PNV+ YN+LI + + +A+++ DLMV +G + TYN+LI G
Sbjct: 350 YFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKG 409
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+CK D A LL EM++ G + ++T+++ C +A M P
Sbjct: 410 YCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPG 469
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
T ++ GL K HS+A+ L+ +D N +L G+C
Sbjct: 470 GGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQK 529
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
D ++N +I G C + LDEA L M + G P+ +Y++ + GL
Sbjct: 530 EILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMN 589
Query: 306 DISRSEKYLQIMKCKGFPVDANTTELLI 333
+ + ++ K G D T ++I
Sbjct: 590 KVEEAIQFWDDCKRNGMLPDVYTYSVMI 617
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 156/343 (45%), Gaps = 1/343 (0%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KG+ P + + I K G+ +E L +M + GV P+V TF+ ++DG G G
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 313
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A MV G+EP ++TY+ L+ G ++ +A V M ++G P+V+ YN+LI
Sbjct: 314 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 373
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
+ + +++AI + MV++GL T+ L+ G+C+ G+ A+ L M G
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 433
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
N + T ++ L A+ M ++ + ++ G+C
Sbjct: 434 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 493
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
DT T N ++ GLC G LDEA + + GC +R SYN + G K
Sbjct: 494 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK 553
Query: 305 LDISRSEKYLQIMKCKGFPVDANTTELLIC-IYSANKGDNAFQ 346
+ + +L M +G D T +LIC +++ NK + A Q
Sbjct: 554 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQ 596
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 143/301 (47%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
+KG + N L+ GL + G+ E + E++ +G + D +++ L+ G + +
Sbjct: 498 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 557
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A + MV G++P+ TY+ LI G +++EEA++ +D R G LP V TY+ +I
Sbjct: 558 EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 617
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
G CK + + EM+++ ++P+ V + L+ +C+ G+ A EL MK G
Sbjct: 618 DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 677
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXX 243
PN T T ++ G+ EA LF M ++ ++ Y ++DG
Sbjct: 678 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECL 737
Query: 244 XXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLR 303
+ T+ +MI G +G + EA LL M E G P+ +Y F++G L+
Sbjct: 738 LREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 797
Query: 304 K 304
+
Sbjct: 798 Q 798
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 151/324 (46%), Gaps = 2/324 (0%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G++PT+++Y+ L++GL + R + +L EM +KG P+V ++ L+D F + G ++
Sbjct: 324 RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNK 383
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A + MV G+ TYN+LI GYC Q + A ++ M+ G + ++ S+I
Sbjct: 384 AIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVIC 443
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
C D A+ +GEM+ + P T L+ G C+ GK A EL+F G V
Sbjct: 444 LLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVV 503
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
+ +T +L GL + EA + + + +D V YN ++ G C
Sbjct: 504 DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 563
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
D YT++I+I GL ++EA + + NG P+ +Y+V + G +
Sbjct: 564 DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA 623
Query: 305 LDISRSEKYLQIMKCKGFPVDANT 328
+++ M K V NT
Sbjct: 624 ERTEEGQEFFDEMMSKN--VQPNT 645
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 154/376 (40%), Gaps = 49/376 (13%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFS------------- 50
SKG+ T +YN LI+G K G+ LL EM+ G + +F+
Sbjct: 393 SKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFD 452
Query: 51 ----------------------ILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLI 88
L+ G K G S A + ++ G + T N+L+
Sbjct: 453 SALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALL 512
Query: 89 GGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLK 148
G C +++EA ++ ++ RGC+ V+YN+LI G C K +D A L EMV GLK
Sbjct: 513 HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLK 572
Query: 149 PDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSL 208
PD T++ L+ G + K A + + K +G +P++ T +V++DG K E
Sbjct: 573 PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEF 632
Query: 209 FRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCW 268
F M ++ + VVYN ++ C ++ T+ +I+G+
Sbjct: 633 FDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSI 692
Query: 269 EGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCK-------- 320
++EA+ L M G PN Y + G + + + E L+ M K
Sbjct: 693 ISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKIT 752
Query: 321 ------GFPVDANTTE 330
G+ D N TE
Sbjct: 753 YTVMIGGYARDGNVTE 768
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 83/167 (49%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
SK +QP V YN LI+ + GR L +M KG+ P+ T++ L+ G V
Sbjct: 638 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 697
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A+ + M G+EPNV Y +LI GY QM + + M + P+ +TY +I
Sbjct: 698 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 757
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAA 170
G+ + +V A LL EM +G+ PD +T+ + G+ + G L A
Sbjct: 758 GGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 10/125 (8%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G++P + Y LI G K G+ + LL EM K V P+ T+++++ G+ ++G V+
Sbjct: 709 EGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTE 768
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A ++ M G+ P+ +TY I GY + + EA K D Y ++I
Sbjct: 769 ASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSD----------EENYAAIIE 818
Query: 125 GWCKV 129
GW K+
Sbjct: 819 GWNKL 823
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 159/334 (47%), Gaps = 14/334 (4%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQK-----GVMPDVQTFSILVDGFGKEG 60
G++ ++ S N L+ L + R+ L++ M + G+ P++ T ++LV K+
Sbjct: 150 GVKRSVRSLNTLLNVLIQNQRF----DLVHAMFKNSKESFGITPNIFTCNLLVKALCKKN 205
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
+ A V+ + +G+ PN+VTY +++GGY R ME A +V + M+ RG P TY
Sbjct: 206 DIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYT 265
Query: 121 SLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEH 180
L+ G+CK+ A ++ +M ++P+ VT+ ++ C+ K A+ +F M E
Sbjct: 266 VLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLER 325
Query: 181 GQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXX 240
+P+ C ++D L + EA L+R M K++ D + + ++ +C
Sbjct: 326 SFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEA 385
Query: 241 XXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHG 300
T+N +I G+C +G L EA L M E C PN +YNV + G
Sbjct: 386 RKLFDEFEKGSIP-SLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEG 444
Query: 301 LLRKLDISRSEKYLQIMKCKG-FPVDANTTELLI 333
L + ++ + L+ M G FP N T LI
Sbjct: 445 LSKNGNVKEGVRVLEEMLEIGCFP---NKTTFLI 475
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 160/354 (45%), Gaps = 11/354 (3%)
Query: 2 KNSK---GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGK 58
KNSK GI P I + N L++ L K + +L E+ G++P++ T++ ++ G+
Sbjct: 179 KNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVA 238
Query: 59 EGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVT 118
G + A+ V+ M+ G P+ TY L+ GYC + EA V D M + P+ VT
Sbjct: 239 RGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVT 298
Query: 119 YNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMK 178
Y +I CK K A + EM+ PD ++ C+ K A L+ M
Sbjct: 299 YGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKML 358
Query: 179 EHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXX 238
++ +P+ + ++ L K +EA LF EK I ++ YN ++ GMC
Sbjct: 359 KNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIP-SLLTYNTLIAGMCEKGELT 417
Query: 239 XXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFV 298
+ +T+N++I GL G + E +L M E GC PN+ ++ +
Sbjct: 418 EAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILF 477
Query: 299 HGLLRKLDISRSEKYLQI--MKCKGFPVDANTTELLICIYSA--NKGDNAFQEL 348
GL + + + E ++I M VD + EL + ++ +KG +EL
Sbjct: 478 EGLQK---LGKEEDAMKIVSMAVMNGKVDKESWELFLKKFAGELDKGVLPLKEL 528
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 147/317 (46%), Gaps = 43/317 (13%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G P +Y LI GL +FGR E L EM++K P V T++ L++G V
Sbjct: 186 RGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDE 245
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A + M G+EPNV TY+SL+ G C + +AM++F++M+ RGC P++VTY +LI
Sbjct: 246 AMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLIT 305
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G CK + + A+ LL M +GLKPD + ++ GFC + K A M G P
Sbjct: 306 GLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITP 365
Query: 185 N-------LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXX 237
N ++T ++ GL + S A +L+ +M I +++
Sbjct: 366 NRLTWNIHVKTSNEVVRGLC-ANYPSRAFTLYLSMRSRGISVEV---------------- 408
Query: 238 XXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVF 297
T +++ LC +G +A +L+ + +GC P++ ++ +
Sbjct: 409 -------------------ETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLL 449
Query: 298 VHGLLRKLDISRSEKYL 314
+ L K + + L
Sbjct: 450 IGHTLDKTIVGEASDTL 466
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 142/304 (46%), Gaps = 42/304 (13%)
Query: 37 MMQKGVMPDVQTFSILVDGFGK-EGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRH 95
M + G+ P V + ++L+ + +G V + M G +P+ TY +LI G C
Sbjct: 147 MREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFG 206
Query: 96 QMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWT 155
+++EA K+F MV + C P+VVTY SLI+G C K+VD A+ L EM ++G++P+V T++
Sbjct: 207 RIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYS 266
Query: 156 ALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKS 215
+L+ G C+ G+ L A ELF M G PN+ T T ++ GL K + EA+ L M
Sbjct: 267 SLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQ 326
Query: 216 DIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEA 275
+ D +Y ++ G C EA
Sbjct: 327 GLKPDAGLYGKVISGFCAISK-----------------------------------FREA 351
Query: 276 EELLMRMEENGCPPNRCSYNVFV---HGLLRKLDI---SRSEKYLQIMKCKGFPVDANTT 329
L M G PNR ++N+ V + ++R L SR+ M+ +G V+ T
Sbjct: 352 ANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETL 411
Query: 330 ELLI 333
E L+
Sbjct: 412 ESLV 415
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 114/262 (43%), Gaps = 8/262 (3%)
Query: 71 FMVHVGVEPNVVTYNSLIG---GYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWC 127
+V + +E VV+ + L+ GY H+ ++++VF M C PS Y +++
Sbjct: 73 LIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILV 132
Query: 128 KVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQV-GKPLAAKELFFTMKEHGQVPNL 186
+ ++ A M GL P V + L+ C+ G A ++F M + G P+
Sbjct: 133 EENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDS 192
Query: 187 QTCTVILDGLFKCRFH--SEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
T ++ GL CRF EA LF M + D +V Y +++G+C
Sbjct: 193 YTYGTLISGL--CRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYL 250
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
+ +T++ ++ GLC +G +A EL M GC PN +Y + GL ++
Sbjct: 251 EEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKE 310
Query: 305 LDISRSEKYLQIMKCKGFPVDA 326
I + + L M +G DA
Sbjct: 311 QKIQEAVELLDRMNLQGLKPDA 332
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 96/198 (48%), Gaps = 8/198 (4%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
SKGI+P + +Y+ L+ GL K GR + L MM +G P++ T++ L+ G KE +
Sbjct: 254 KSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKI 313
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTY--- 119
A ++ M G++P+ Y +I G+C + EA D M+ G P+ +T+
Sbjct: 314 QEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIH 373
Query: 120 ----NSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFF 175
N ++ G C RA L M + G+ +V T +LV C+ G+ A +L
Sbjct: 374 VKTSNEVVRGLC-ANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVD 432
Query: 176 TMKEHGQVPNLQTCTVIL 193
+ G +P+ T +++
Sbjct: 433 EIVTDGCIPSKGTWKLLI 450
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 78/166 (46%), Gaps = 8/166 (4%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
M ++G +P +V+Y LI GL K + +E LL M +G+ PD + ++ GF
Sbjct: 287 MMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAIS 346
Query: 61 LVSGARCVMGFMVHVGVEPNVVTY-------NSLIGGYCLRHQMEEAMKVFDLMVRRGCL 113
A + M+ G+ PN +T+ N ++ G C + A ++ M RG
Sbjct: 347 KFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYP-SRAFTLYLSMRSRGIS 405
Query: 114 PSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVG 159
V T SL+ CK + +A+ L+ E+V +G P TW L+G
Sbjct: 406 VEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIG 451
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 117/228 (51%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
+KG +PT+V+Y +I GL K R E L E K + +V +S L+DGFGK G +
Sbjct: 615 TKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRID 674
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A ++ ++ G+ PN+ T+NSL+ ++ EA+ F M C P+ VTY LI
Sbjct: 675 EAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILI 734
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
+G CKV+ ++A EM +G+KP +++T ++ G + G A LF K +G V
Sbjct: 735 NGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGV 794
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGM 231
P+ +++GL +A SLF + + + V+LD +
Sbjct: 795 PDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTL 842
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 153/326 (46%)
Query: 8 QPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARC 67
P + N + +FK G ++G + E+ + +PD +++SIL+ G K G +
Sbjct: 514 SPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYE 573
Query: 68 VMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWC 127
+ M G + YN +I G+C ++ +A ++ + M +G P+VVTY S+I G
Sbjct: 574 LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLA 633
Query: 128 KVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQ 187
K+ +D A L E ++ ++ +VV +++L+ GF +VG+ A + + + G PNL
Sbjct: 634 KIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLY 693
Query: 188 TCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXX 247
T +LD L K +EA+ F++M++ + V Y ++++G+C
Sbjct: 694 TWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEM 753
Query: 248 XXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDI 307
T ++ MI GL G + EA L R + NG P+ YN + GL
Sbjct: 754 QKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRA 813
Query: 308 SRSEKYLQIMKCKGFPVDANTTELLI 333
+ + + +G P+ T +L+
Sbjct: 814 MDAFSLFEETRRRGLPIHNKTCVVLL 839
Score = 131 bits (330), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 162/339 (47%), Gaps = 12/339 (3%)
Query: 2 KNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGL 61
+ +KG P++++YNC++ L K G+ E A ++E M+K P++ T++IL+D + G
Sbjct: 334 QRAKGSIPSVIAYNCILTCLRKMGKVDE-ALKVFEEMKKDAAPNLSTYNILIDMLCRAGK 392
Query: 62 VSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNS 121
+ A + M G+ PNV T N ++ C +++EA +F+ M + C P +T+ S
Sbjct: 393 LDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCS 452
Query: 122 LIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHG 181
LI G KV VD A + +M++ + + + +T+L+ F G+ +++ M
Sbjct: 453 LIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQN 512
Query: 182 QVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXX 241
P+LQ +D +FK + ++F ++ D Y++++ G+
Sbjct: 513 CSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETY 572
Query: 242 XXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGL 301
DT +NI+I G C G +++A +LL M+ G P +Y + GL
Sbjct: 573 ELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL 632
Query: 302 LR--KLDISRSEKYLQIMKCKGFPVDANTTELLICIYSA 338
+ +LD E Y+ + K + EL + IYS+
Sbjct: 633 AKIDRLD----EAYMLFEEAK-----SKRIELNVVIYSS 662
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 163/352 (46%), Gaps = 13/352 (3%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G +PT+ + LI+G K GR LL EM + D+ +++ +D FGK G V A
Sbjct: 198 GYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMA 257
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ G++P+ VTY S+IG C ++++EA+++F+ + + +P YN++I G
Sbjct: 258 WKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMG 317
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+ D A LL +G P V+ + ++ ++GK A ++F MK+ PN
Sbjct: 318 YGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APN 376
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
L T +++D L + A L +M+K+ + ++ N+M+D +C
Sbjct: 377 LSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFE 436
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSY-----NVFVHG 300
D TF +I GL G +D+A ++ +M ++ C N Y N F HG
Sbjct: 437 EMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHG 496
Query: 301 LLRKLDISRSEKYLQIMKCKGFPVDANTTELLICIYSA---NKGDNAFQELQ 349
RK D + K + C NT + C++ A KG F+E++
Sbjct: 497 --RKEDGHKIYKDMINQNCSPDLQLLNT--YMDCMFKAGEPEKGRAMFEEIK 544
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 137/313 (43%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+ P + + N ++ L K + E + EM K PD TF L+DG GK G V A
Sbjct: 407 GLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDA 466
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
V M+ N + Y SLI + + E+ K++ M+ + C P + N+ +
Sbjct: 467 YKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDC 526
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
K + ++ + E+ PD +++ L+ G + G ELF++MKE G V +
Sbjct: 527 MFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLD 586
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+ +++DG KC ++A L M+ + +V Y ++DG+
Sbjct: 587 TRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFE 646
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
+ ++ +I G G +DEA +L + + G PN ++N + L++
Sbjct: 647 EAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAE 706
Query: 306 DISRSEKYLQIMK 318
+I+ + Q MK
Sbjct: 707 EINEALVCFQSMK 719
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 121/294 (41%), Gaps = 1/294 (0%)
Query: 8 QPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARC 67
+P +Y LI L +M + G P V F+ L+ GF KEG V A
Sbjct: 165 RPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALS 224
Query: 68 VMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWC 127
++ M ++ ++V YN I + +++ A K F + G P VTY S+I C
Sbjct: 225 LLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLC 284
Query: 128 KVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQ 187
K +D A+ + + P + ++ G+ GK A L + G +P++
Sbjct: 285 KANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVI 344
Query: 188 TCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXX 247
IL L K EA+ +F M+K D ++ YN+++D +C
Sbjct: 345 AYNCILTCLRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSM 403
Query: 248 XXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGL 301
+ T NIM+ LC LDEA + M+ C P+ ++ + GL
Sbjct: 404 QKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGL 457
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 148/356 (41%), Gaps = 40/356 (11%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
+ G++P V+Y +I L K R E + + + +P ++ ++ G+G G
Sbjct: 266 ANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFD 325
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRH--QMEEAMKVFDLMVRRGCLPSVVTYNS 121
A ++ G P+V+ YN ++ CLR +++EA+KVF+ M ++ P++ TYN
Sbjct: 326 EAYSLLERQRAKGSIPSVIAYNCILT--CLRKMGKVDEALKVFEEM-KKDAAPNLSTYNI 382
Query: 122 LIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHG 181
LI C+ +D A L M GL P+V T +V C+ K A +F M
Sbjct: 383 LIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKV 442
Query: 182 QVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVY----------------- 224
P+ T ++DGL K +A ++ M SD + +VY
Sbjct: 443 CTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGH 502
Query: 225 ------------------NVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGL 266
N +D M D +++I+I GL
Sbjct: 503 KIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGL 562
Query: 267 CWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGF 322
G +E EL M+E GC + +YN+ + G + ++++ + L+ MK KGF
Sbjct: 563 IKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGF 618
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 95/195 (48%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
SK I+ +V Y+ LI G K GR E +L E+MQKG+ P++ T++ L+D K ++
Sbjct: 650 SKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEIN 709
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A M + PN VTY LI G C + +A + M ++G PS ++Y ++I
Sbjct: 710 EALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMI 769
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
G K ++ A L G PD + A++ G + + A LF + G
Sbjct: 770 SGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLP 829
Query: 184 PNLQTCTVILDGLFK 198
+ +TC V+LD L K
Sbjct: 830 IHNKTCVVLLDTLHK 844
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 141/330 (42%), Gaps = 1/330 (0%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
S + IV YN I K G+ +E+ G+ PD T++ ++ K +
Sbjct: 231 SSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLD 290
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A + + P YN++I GY + +EA + + +G +PSV+ YN ++
Sbjct: 291 EAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCIL 350
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
K+ VD A+ + EM + P++ T+ L+ C+ GK A EL +M++ G
Sbjct: 351 TCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLF 409
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXX 243
PN++T +++D L K + EA ++F M+ D + + ++DG+
Sbjct: 410 PNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKV 469
Query: 244 XXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLR 303
++ + +I+ G ++ ++ M C P+ N ++ + +
Sbjct: 470 YEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFK 529
Query: 304 KLDISRSEKYLQIMKCKGFPVDANTTELLI 333
+ + + +K + F DA + +LI
Sbjct: 530 AGEPEKGRAMFEEIKARRFVPDARSYSILI 559
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 128/303 (42%), Gaps = 3/303 (0%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G P++ + ++ G K + +EG ++ M + P ++ L+ F
Sbjct: 128 GFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMM 187
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ M +G EP V + +LI G+ +++ A+ + D M +V YN I
Sbjct: 188 LTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDS 247
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+ KV VD A E+ GLKPD VT+T+++G C+ + A E+F ++++ +VP
Sbjct: 248 FGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPC 307
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
++ G EA SL ++ YN +L +
Sbjct: 308 TYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCL-RKMGKVDEALKVF 366
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLR-- 303
+ T+NI+I LC G LD A EL M++ G PN + N+ V L +
Sbjct: 367 EEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQ 426
Query: 304 KLD 306
KLD
Sbjct: 427 KLD 429
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 132/334 (39%), Gaps = 35/334 (10%)
Query: 13 SYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFM 72
SYN L+ + + + +L EM G P V T +V G K + V+ M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 73 VHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDV 132
P Y +LIG + + + + +F M G P+V + +LI G+ K V
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 133 DRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVI 192
D A+ LL EM + L D+V + + F +VGK A + F ++ +G P+ T T +
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279
Query: 193 LDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXX 252
+ L K EA+ +F +EK+
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKN-----------------------------------RR 304
Query: 253 XFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEK 312
TY +N MI G G DEA LL R G P+ +YN + L + + + K
Sbjct: 305 VPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALK 364
Query: 313 YLQIMKCKGFPVDANTTELLICIYSANKGDNAFQ 346
+ MK P + L+ + A K D AF+
Sbjct: 365 VFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFE 398
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 162/368 (44%), Gaps = 37/368 (10%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
GI P +V+YNC+I+G R +E LL +M KG +PD ++ ++ KE +
Sbjct: 307 GIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEV 366
Query: 66 RCVMGFMV-HVGVEPNVVTYNSLIG----------------------------GY----- 91
R +M M G+ P+ VTYN+LI GY
Sbjct: 367 RDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVH 426
Query: 92 --CLRHQMEEAMKVFDLMVRRG-CLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLK 148
C +M EA + + M+ +G C P VVTY ++++G+C++ +VD+A LL M G K
Sbjct: 427 ALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHK 486
Query: 149 PDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSL 208
P+ V++TAL+ G C+ GK L A+E+ +EH PN T +VI+ GL + SEA +
Sbjct: 487 PNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDV 546
Query: 209 FRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCW 268
R M V N++L +C + F +I G C
Sbjct: 547 VREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQ 606
Query: 269 EGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANT 328
LD A +L M + +Y V L +K I+ + + ++ M KG T
Sbjct: 607 NDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVT 666
Query: 329 TELLICIY 336
+I Y
Sbjct: 667 YRTVIHRY 674
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 156/328 (47%), Gaps = 5/328 (1%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+GI T +++ ++ + G+ ++ +L M + GV P++ + +D F + +
Sbjct: 236 RGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEK 295
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A + M VG+ PNVVTYN +I GYC H++EEA+++ + M +GCLP V+Y +++
Sbjct: 296 ALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMG 355
Query: 125 GWCKVKDVDRAICLLGEMVNE-GLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
CK K + L+ +M E GL PD VT+ L+ + A +E G
Sbjct: 356 YLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFR 415
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAM-EKSDIDLDIVVYNVMLDGMCXXXXXXXXXX 242
+ + I+ L K SEA L M K D+V Y +++G C
Sbjct: 416 IDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKK 475
Query: 243 XXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLL 302
+T ++ ++ G+C G EA E++ EE+ PN +Y+V +HGL
Sbjct: 476 LLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLR 535
Query: 303 RKLDISRSEKYLQIMKCKGF---PVDAN 327
R+ +S + ++ M KGF PV+ N
Sbjct: 536 REGKLSEACDVVREMVLKGFFPGPVEIN 563
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 145/292 (49%), Gaps = 2/292 (0%)
Query: 14 YNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMV 73
Y +++ L K + +L M ++G+ + FS ++ + + G + A V+ M
Sbjct: 210 YYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQ 269
Query: 74 HVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVD 133
GVEPN++ N+ I + +++E+A++ + M G +P+VVTYN +I G+C + V+
Sbjct: 270 RAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVE 329
Query: 134 RAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTM-KEHGQVPNLQTCTVI 192
AI LL +M ++G PD V++ ++G C+ + + ++L M KEHG VP+ T +
Sbjct: 330 EAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTL 389
Query: 193 LDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXX 252
+ L K EA+ + ++ +D + Y+ ++ +C
Sbjct: 390 IHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGH 449
Query: 253 -XFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLR 303
D T+ ++ G C G +D+A++LL M +G PN SY ++G+ R
Sbjct: 450 CPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCR 501
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 141/325 (43%), Gaps = 5/325 (1%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
M G+ P V+YN LI L K E L + +KG D +S +V KEG
Sbjct: 373 MAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEG 432
Query: 61 LVSGARCVMGFMVHVG-VEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTY 119
+S A+ ++ M+ G P+VVTY +++ G+C ++++A K+ +M G P+ V+Y
Sbjct: 433 RMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSY 492
Query: 120 NSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKE 179
+L++G C+ A ++ P+ +T++ ++ G + GK A ++ M
Sbjct: 493 TALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVL 552
Query: 180 HGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXX 239
G P ++L L + EA +++V + ++ G C
Sbjct: 553 KGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDA 612
Query: 240 XXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVH 299
D +T+ ++ L +G + EA EL+ +M G P +Y +H
Sbjct: 613 ALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIH 672
Query: 300 GL--LRKLD--ISRSEKYLQIMKCK 320
+ K+D ++ EK + KC+
Sbjct: 673 RYCQMGKVDDLVAILEKMISRQKCR 697
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 133/291 (45%), Gaps = 3/291 (1%)
Query: 45 DVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVF 104
D + +++ K L G+R V+ M G+ ++ ++ Y Q+ +A+KV
Sbjct: 206 DPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVL 265
Query: 105 DLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQV 164
LM R G P+++ N+ I + + +++A+ L M G+ P+VVT+ ++ G+C +
Sbjct: 266 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 325
Query: 165 GKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSD-IDLDIVV 223
+ A EL M G +P+ + I+ L K + E L + M K + D V
Sbjct: 326 HRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVT 385
Query: 224 YNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRME 283
YN ++ + D ++ ++ LC EG + EA++L+ M
Sbjct: 386 YNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEML 445
Query: 284 ENG-CPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGF-PVDANTTELL 332
G CPP+ +Y V+G R ++ +++K LQ+M G P + T LL
Sbjct: 446 SKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALL 496
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 138/336 (41%), Gaps = 38/336 (11%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKG-VMPDVQTFSILVDGFGKEGLVS 63
KG + + Y+ ++ L K GR E L+ EM+ KG PDV T++ +V+GF + G V
Sbjct: 412 KGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVD 471
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYC------------------------------- 92
A+ ++ M G +PN V+Y +L+ G C
Sbjct: 472 KAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIM 531
Query: 93 --LRHQ--MEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLK 148
LR + + EA V MV +G P V N L+ C+ A + E +N+G
Sbjct: 532 HGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCA 591
Query: 149 PDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSL 208
+VV +T ++ GFCQ + AA + M + ++ T T ++D L K +EA L
Sbjct: 592 INVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATEL 651
Query: 209 FRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCW 268
+ M ID V Y ++ C Y N +I LC
Sbjct: 652 MKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTIY--NQVIEKLCV 709
Query: 269 EGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
G L+EA+ LL ++ + + + G L+K
Sbjct: 710 LGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKK 745
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 97/186 (52%), Gaps = 2/186 (1%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
+KG +V++ +I G + +L +M DV T++ LVD GK+G ++
Sbjct: 587 NKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIA 646
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A +M M+H G++P VTY ++I YC ++++ + + + M+ R ++ YN +I
Sbjct: 647 EATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTI--YNQVI 704
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
C + ++ A LLG+++ + D T AL+ G+ + G PL+A ++ M +
Sbjct: 705 EKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLI 764
Query: 184 PNLQTC 189
P+++ C
Sbjct: 765 PDVKMC 770
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 161/343 (46%), Gaps = 1/343 (0%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCV 68
P S + L++GL + + + +L M+ G +PD T+++++ K+G + A +
Sbjct: 137 PHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVL 196
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
+ M G P+V+TYN++I E+A++ + ++ GC P ++TY L+ C+
Sbjct: 197 LEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCR 256
Query: 129 VKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQT 188
RAI +L +M EG PD+VT+ +LV C+ G + + HG N T
Sbjct: 257 YCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVT 316
Query: 189 CTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXX 248
+L L + E + M ++ ++ YN++++G+C
Sbjct: 317 YNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQML 376
Query: 249 XXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDIS 308
D T+N ++ + EG++D+A ELL ++ CPP +YN + GL +K +
Sbjct: 377 EQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMK 436
Query: 309 RS-EKYLQIMKCKGFPVDANTTELLICIYSANKGDNAFQELQQ 350
++ E Y Q++ FP D L+ AN + A Q L++
Sbjct: 437 KALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKE 479
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 140/296 (47%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G P +++Y L++ + ++ +L +M +G PD+ T++ LV+ + G +
Sbjct: 239 GCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEV 298
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
V+ ++ G+E N VTYN+L+ C +E ++ ++M + P+V+TYN LI+G
Sbjct: 299 ASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILING 358
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
CK + + RAI +M+ + PD+VT+ ++G + G A EL +K P
Sbjct: 359 LCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPG 418
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
L T ++DGL K +A+ L+ M + I D + ++ G C
Sbjct: 419 LITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLK 478
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGL 301
T+ ++I+GLC + ++ A E++ M GC P+ Y V G+
Sbjct: 479 ETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGV 534
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 143/325 (44%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCV 68
P ++YN +I L K G + LL +M G PDV T++ ++ G A
Sbjct: 172 PDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRF 231
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
+ G P ++TY L+ C A++V + M GC P +VTYNSL++ C+
Sbjct: 232 WKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCR 291
Query: 129 VKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQT 188
+++ ++ +++ GL+ + VT+ L+ C +E+ M + P + T
Sbjct: 292 RGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVIT 351
Query: 189 CTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXX 248
++++GL K R S A+ F M + DIV YN +L M
Sbjct: 352 YNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLK 411
Query: 249 XXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDIS 308
T+N +I GL +GL+ +A EL +M + G P+ + ++G R +
Sbjct: 412 NTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVE 471
Query: 309 RSEKYLQIMKCKGFPVDANTTELLI 333
+ + L+ +G + +T L+I
Sbjct: 472 EAGQVLKETSNRGNGIRGSTYRLVI 496
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 111/229 (48%), Gaps = 15/229 (6%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
S G++ V+YN L+ L W E +L M Q P V T++IL++G K L+S
Sbjct: 307 SHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLS 366
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A M+ P++VTYN+++G +++A+++ L+ C P ++TYNS+I
Sbjct: 367 RAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVI 426
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
G K + +A+ L +M++ G+ PD +T +L+ GFC+ A ++ G
Sbjct: 427 DGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNG 486
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMC 232
T +++ GL K K +I++ I V +ML G C
Sbjct: 487 IRGSTYRLVIQGLCK---------------KKEIEMAIEVVEIMLTGGC 520
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 128/282 (45%), Gaps = 5/282 (1%)
Query: 45 DVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVF 104
D +T + ++ G ++ A ++ M P+ + ++L+ G Q+++AM +
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 105 DLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQV 164
+MV G +P +TYN +I CK + A+ LL +M G PDV+T+ ++
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222
Query: 165 GKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRF--HSEAMSLFRAMEKSDIDLDIV 222
G A + ++G P + T TV+++ CR+ + A+ + M DIV
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPFMITYTVLVE--LVCRYCGSARAIEVLEDMAVEGCYPDIV 280
Query: 223 VYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRM 282
YN +++ C +T T+N ++ LC DE EE+L M
Sbjct: 281 TYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIM 340
Query: 283 EENGCPPNRCSYNVFVHGLLRKLDISRS-EKYLQIMKCKGFP 323
+ P +YN+ ++GL + +SR+ + + Q+++ K P
Sbjct: 341 YQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLP 382
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 92/192 (47%), Gaps = 35/192 (18%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCV 68
PT+++YN LI GL K Y+M+++ +PD+ T++ ++ KEG+V A +
Sbjct: 347 PTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIEL 406
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI----- 123
+G + + P ++TYNS+I G + M++A++++ M+ G P +T SLI
Sbjct: 407 LGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCR 466
Query: 124 ------------------------------HGWCKVKDVDRAICLLGEMVNEGLKPDVVT 153
G CK K+++ AI ++ M+ G KPD
Sbjct: 467 ANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETI 526
Query: 154 WTALVGGFCQVG 165
+TA+V G ++G
Sbjct: 527 YTAIVKGVEEMG 538
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 162/372 (43%), Gaps = 38/372 (10%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKG-VMPDVQTFSILVDGFGKEGLVSG 64
GI+PT+ +YN L+ GL + + A ++E+M+ G + PD+ T++ ++ G+ K G
Sbjct: 217 GIEPTLYTYNFLMNGLVS-AMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQK 275
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLI-----------------------------------G 89
A + M G E + +TY ++I G
Sbjct: 276 AMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIG 335
Query: 90 GYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKP 149
G C ++ E VF+ M+R+G P+V Y LI G+ K V+ AI LL M++EG KP
Sbjct: 336 GLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKP 395
Query: 150 DVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLF 209
DVVT++ +V G C+ G+ A + F T + G N + ++DGL K EA LF
Sbjct: 396 DVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLF 455
Query: 210 RAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDT-YTFNIMIRGLCW 268
M + D YN ++D T YT+ I++ G+
Sbjct: 456 EEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFK 515
Query: 269 EGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANT 328
E +EA +L M + G P + GL ++R+ K L + G +DA
Sbjct: 516 EHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAAC 575
Query: 329 TELLICIYSANK 340
+++ + A +
Sbjct: 576 EDMINTLCKAGR 587
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 137/299 (45%), Gaps = 2/299 (0%)
Query: 10 TIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVM 69
T+ + N LI+ K G +E + +M + G+ P + T++ L++G V A V
Sbjct: 186 TVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVF 245
Query: 70 GFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKV 129
M ++P++VTYN++I GYC Q ++AM+ M RG +TY ++I
Sbjct: 246 EVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYAD 305
Query: 130 KDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTC 189
D + L EM +G++ ++ ++GG C+ GK +F M G PN+
Sbjct: 306 SDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIY 365
Query: 190 TVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXX 249
TV++DG K +A+ L M D+V Y+V+++G+C
Sbjct: 366 TVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRF 425
Query: 250 XXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLL--RKLD 306
++ ++ +I GL G +DEAE L M E GC + YN + RK+D
Sbjct: 426 DGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVD 484
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 133/285 (46%), Gaps = 2/285 (0%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
+ KGIQ +++ +I GL K G+ EG + M++KG P+V +++L+DG+ K G V
Sbjct: 319 DEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSV 378
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
A ++ M+ G +P+VVTY+ ++ G C ++EEA+ F G + + Y+SL
Sbjct: 379 EDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSL 438
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTM-KEHG 181
I G K VD A L EM +G D + AL+ F + K A LF M +E G
Sbjct: 439 IDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEG 498
Query: 182 QVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXX 241
+ T T++L G+FK + EA+ L+ M I + + G+C
Sbjct: 499 CDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARAC 558
Query: 242 XXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENG 286
D + MI LC G + EA +L + E G
Sbjct: 559 KILDELAPMGVILDAACED-MINTLCKAGRIKEACKLADGITERG 602
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 115/229 (50%), Gaps = 1/229 (0%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
++G + ++Y +IQ + + L EM +KG+ FS+++ G KEG ++
Sbjct: 285 TRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLN 344
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
V M+ G +PNV Y LI GY +E+A+++ M+ G P VVTY+ ++
Sbjct: 345 EGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVV 404
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
+G CK V+ A+ +GL + + +++L+ G + G+ A+ LF M E G
Sbjct: 405 NGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCT 464
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSD-IDLDIVVYNVMLDGM 231
+ ++D K R EA++LF+ ME+ + D + Y ++L GM
Sbjct: 465 RDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGM 513
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 89/250 (35%), Gaps = 35/250 (14%)
Query: 119 YNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMK 178
Y SL+ KDVDR + E+ V AL+ F ++G ++ MK
Sbjct: 155 YVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMK 214
Query: 179 EHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXX 238
E+G P L T +++GL F A +F ME I DIV YN M+ G C
Sbjct: 215 ENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQ 274
Query: 239 XXXXXXXXXXXXXXXFDTYT-----------------------------------FNIMI 263
D T F+++I
Sbjct: 275 KAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVI 334
Query: 264 RGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFP 323
GLC EG L+E + M G PN Y V + G + + + + L M +GF
Sbjct: 335 GGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFK 394
Query: 324 VDANTTELLI 333
D T +++
Sbjct: 395 PDVVTYSVVV 404
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 120/220 (54%)
Query: 12 VSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGF 71
V+YN ++ G R + +L EM+++G+ P++ T++ ++ GF + G + A
Sbjct: 196 VTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLE 255
Query: 72 MVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKD 131
M E +VVTY +++ G+ + +++ A VFD M+R G LPSV TYN++I CK +
Sbjct: 256 MKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDN 315
Query: 132 VDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTV 191
V+ A+ + EMV G +P+V T+ L+ G G+ +EL M+ G PN QT +
Sbjct: 316 VENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNM 375
Query: 192 ILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGM 231
++ +C +A+ LF M D ++ YN+++ GM
Sbjct: 376 MIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGM 415
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 109/202 (53%), Gaps = 1/202 (0%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+GI P + +YN +++G F+ G+ + EM ++ DV T++ +V GFG G +
Sbjct: 224 RGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKR 283
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
AR V M+ GV P+V TYN++I C + +E A+ +F+ MVRRG P+V TYN LI
Sbjct: 284 ARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIR 343
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G + R L+ M NEG +P+ T+ ++ + + + A LF M +P
Sbjct: 344 GLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLP 403
Query: 185 NLQTCTVILDGLFKCRFHSEAM 206
NL T +++ G+F R SE M
Sbjct: 404 NLDTYNILISGMF-VRKRSEDM 424
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 129/293 (44%), Gaps = 1/293 (0%)
Query: 45 DVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVF 104
D +F + +D + L ++ M + + P+ T+ + Y + ++A+K+F
Sbjct: 90 DASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLF 149
Query: 105 DLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQV 164
M GC + ++N+++ CK K V++A L + D VT+ ++ G+C +
Sbjct: 150 LNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLI 208
Query: 165 GKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVY 224
+ A E+ M E G PNL T +L G F+ A F M+K D ++D+V Y
Sbjct: 209 KRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTY 268
Query: 225 NVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEE 284
++ G T+N MI+ LC + ++ A + M
Sbjct: 269 TTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVR 328
Query: 285 NGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLICIYS 337
G PN +YNV + GL + SR E+ +Q M+ +G + T ++I YS
Sbjct: 329 RGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYS 381
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 129/297 (43%), Gaps = 46/297 (15%)
Query: 7 IQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA- 65
I P+ ++ + + G+ + L M + G D+ +F+ ++D K V A
Sbjct: 122 IGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAY 181
Query: 66 ---RCVMG-FMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNS 121
R + G F V + VTYN ++ G+CL + +A++V MV RG P++ TYN+
Sbjct: 182 ELFRALRGRFSV------DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNT 235
Query: 122 LIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHG 181
++ G+ + + A EM + DVVT+T +V GF G+ A+ +F M G
Sbjct: 236 MLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREG 295
Query: 182 QVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXX 241
+P++ T ++ L K A+ +F M + + ++ YNV
Sbjct: 296 VLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNV--------------- 340
Query: 242 XXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFV 298
+IRGL G EEL+ RME GC PN +YN+ +
Sbjct: 341 --------------------LIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMI 377
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 155/335 (46%), Gaps = 4/335 (1%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKG-VMPDVQTFSILVDGFGKEGLVSG 64
G+ P +V++N ++ +K GR A +E+M+ V PD TF+I++ K G S
Sbjct: 111 GVGPDLVTHNIVLSA-YKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQ 169
Query: 65 ARCVMGFMVHVGVE--PNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
A + M E P+VVT+ S++ Y ++ ++E VF+ MV G P++V+YN+L
Sbjct: 170 ALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNAL 229
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
+ + A+ +LG++ G+ PDVV++T L+ + + +P AKE+F M++ +
Sbjct: 230 MGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERR 289
Query: 183 VPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXX 242
PN+ T ++D F +EA+ +FR ME+ I ++V +L
Sbjct: 290 KPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDT 349
Query: 243 XXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLL 302
+T +N I L++A L M + + ++ + + G
Sbjct: 350 VLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSC 409
Query: 303 RKLDISRSEKYLQIMKCKGFPVDANTTELLICIYS 337
R + YL+ M+ P+ ++C YS
Sbjct: 410 RMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYS 444
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 157/357 (43%), Gaps = 7/357 (1%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGV--MPDVQTFSILVDGFGK 58
MK +K ++P ++N +I L K G+ + L M +K PDV TF+ ++ +
Sbjct: 142 MKGAK-VRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSV 200
Query: 59 EGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVT 118
+G + R V MV G++PN+V+YN+L+G Y + A+ V + + G +P VV+
Sbjct: 201 KGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVS 260
Query: 119 YNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMK 178
Y L++ + + + +A + M E KP+VVT+ AL+ + G A E+F M+
Sbjct: 261 YTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQME 320
Query: 179 EHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXX 238
+ G PN+ + +L + + ++ A + I+L+ YN +
Sbjct: 321 QDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELE 380
Query: 239 XXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFV 298
D+ TF I+I G C EA L ME+ P + Y+ +
Sbjct: 381 KAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVL 440
Query: 299 HGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLICIYSAN----KGDNAFQELQQN 351
++ ++ +E MK G D ++ Y+A+ K F E++ N
Sbjct: 441 CAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEAN 497
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 144/335 (42%), Gaps = 3/335 (0%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
++G++P IVSYN L+ G +L ++ Q G++PDV +++ L++ +G+
Sbjct: 216 AEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPG 275
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A+ V M +PNVVTYN+LI Y + EA+++F M + G P+VV+ +L+
Sbjct: 276 KAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLL 335
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
+ K +L + G+ + + + +G + + A L+ +M++
Sbjct: 336 AACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVK 395
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXX 243
+ T T+++ G + + EA+S + ME I L VY+ +L
Sbjct: 396 ADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESI 455
Query: 244 XXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLR 303
D + M+ +A EL + ME NG P+ + + + +
Sbjct: 456 FNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNK 515
Query: 304 KLDISRSEKYLQIMKCKGFPVDANTTELLICIYSA 338
S + +M+ K P T + I+SA
Sbjct: 516 GGQPSNVFVLMDLMREKEIPF---TGAVFFEIFSA 547
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 122/290 (42%), Gaps = 4/290 (1%)
Query: 14 YNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMV 73
YN +I+ + + GL +EM + PD +T+ L++ G+ G A +M M+
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 74 HVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVD 133
+ P+ TYN+LI EA++V M G P +VT+N ++ + +
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 134 RAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ--VPNLQTCTV 191
+A+ M ++PD T+ ++ ++G+ A +LF +M+E P++ T T
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 193
Query: 192 ILDGLFKCRFHSEA-MSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXX 250
I+ L+ + E ++F AM + +IV YN ++
Sbjct: 194 IMH-LYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN 252
Query: 251 XXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHG 300
D ++ ++ +A+E+ + M + PN +YN +
Sbjct: 253 GIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDA 302
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/321 (19%), Positives = 140/321 (43%), Gaps = 8/321 (2%)
Query: 38 MQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQM 97
+QK +++++ + V AR + M +P+ TY++LI + Q
Sbjct: 3 IQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQW 62
Query: 98 EEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTAL 157
AM + D M+R PS TYN+LI+ + A+ + +M + G+ PD+VT +
Sbjct: 63 RWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIV 122
Query: 158 VGGFCQVGKPLAAKELFFTMKEHGQV-PNLQTCTVILDGLFKCRFHSEAMSLFRAM--EK 214
+ + + G+ + +F + + +V P+ T +I+ L K S+A+ LF +M ++
Sbjct: 123 LSAY-KSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKR 181
Query: 215 SDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDE 274
++ D+V + ++ + ++N ++ G+
Sbjct: 182 AECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGT 241
Query: 275 AEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLIC 334
A +L +++NG P+ SY ++ R ++++ +M+ + + T LI
Sbjct: 242 ALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALID 301
Query: 335 IYSAN----KGDNAFQELQQN 351
Y +N + F++++Q+
Sbjct: 302 AYGSNGFLAEAVEIFRQMEQD 322
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 149/331 (45%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
+ +G+ +V+Y LI+G K G +E + + +K ++ D + +L+DG+ + G +
Sbjct: 288 SERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQI 347
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
A V M+ +GV N NSLI GYC Q+ EA ++F M P TYN+L
Sbjct: 348 RDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTL 407
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
+ G+C+ VD A+ L +M + + P V+T+ L+ G+ ++G L+ M + G
Sbjct: 408 VDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGV 467
Query: 183 VPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXX 242
+ +C+ +L+ LFK +EAM L+ + + D + NVM+ G+C
Sbjct: 468 NADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKE 527
Query: 243 XXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLL 302
T+ + G G L EA + ME G P YN + G
Sbjct: 528 ILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAF 587
Query: 303 RKLDISRSEKYLQIMKCKGFPVDANTTELLI 333
+ +++ + ++ +G T LI
Sbjct: 588 KYRHLNKVADLVIELRARGLTPTVATYGALI 618
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 154/324 (47%), Gaps = 1/324 (0%)
Query: 2 KNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGL 61
++S G++ +V+YN LI G G + +L M ++GV +V T++ L+ G+ K+GL
Sbjct: 252 ESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGL 311
Query: 62 VSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNS 121
+ A V + + + Y L+ GYC Q+ +A++V D M+ G + NS
Sbjct: 312 MEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNS 371
Query: 122 LIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHG 181
LI+G+CK + A + M + LKPD T+ LV G+C+ G A +L M +
Sbjct: 372 LINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKE 431
Query: 182 QVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXX 241
VP + T ++L G + + +SL++ M K ++ D + + +L+ +
Sbjct: 432 VVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAM 491
Query: 242 XXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGL 301
DT T N+MI GLC ++EA+E+L + C P +Y HG
Sbjct: 492 KLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGY 551
Query: 302 LRKLDISRSEKYLQIMKCKG-FPV 324
+ ++ + + M+ KG FP
Sbjct: 552 YKVGNLKEAFAVKEYMERKGIFPT 575
Score = 127 bits (320), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 160/368 (43%), Gaps = 39/368 (10%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G+ +S + L++ LFK G + E L ++ +G++ D T ++++ G K V+
Sbjct: 465 RGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNE 524
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A+ ++ + +P V TY +L GY ++EA V + M R+G P++ YN+LI
Sbjct: 525 AKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLIS 584
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G K + +++ L+ E+ GL P V T+ AL+ G+C +G A F M E G
Sbjct: 585 GAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITL 644
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDL------------------------- 219
N+ C+ I + LF+ EA L + + D+ L
Sbjct: 645 NVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAE 704
Query: 220 -------------DIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXF-DTYTFNIMIRG 265
+ +VYNV + G+C D YT+ I+I G
Sbjct: 705 SVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHG 764
Query: 266 LCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVD 325
G +++A L M G PN +YN + GL + ++ R+++ L + KG +
Sbjct: 765 CAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPN 824
Query: 326 ANTTELLI 333
A T LI
Sbjct: 825 AITYNTLI 832
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 152/359 (42%), Gaps = 41/359 (11%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
++G+ ++ N +I GL K + E +L + P VQT+ L G+ K G +
Sbjct: 499 ARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLK 558
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLI-GGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
A V +M G+ P + YN+LI G + RH + A V +L R G P+V TY +L
Sbjct: 559 EAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRAR-GLTPTVATYGAL 617
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDV--------------------------VTWTA 156
I GWC + +D+A EM+ +G+ +V V +
Sbjct: 618 ITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDL 677
Query: 157 LVGGFCQVGKPLAA------------KELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSE 204
L+ G+ + + L A + + + + VPN V + GL K +
Sbjct: 678 LLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLED 737
Query: 205 AMSLFRAMEKSDIDL-DIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMI 263
A LF + SD + D Y +++ G + T+N +I
Sbjct: 738 ARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALI 797
Query: 264 RGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGF 322
+GLC G +D A+ LL ++ + G PN +YN + GL++ +++ + + + M KG
Sbjct: 798 KGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGL 856
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 109/230 (47%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
N ++P +YN L+ G + G E L +M QK V+P V T++IL+ G+ + G
Sbjct: 393 NDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAF 452
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
+ M+ GV + ++ ++L+ EAMK+++ ++ RG L +T N +
Sbjct: 453 HDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVM 512
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
I G CK++ V+ A +L + KP V T+ AL G+ +VG A + M+ G
Sbjct: 513 ISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGI 572
Query: 183 VPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMC 232
P ++ ++ G FK R ++ L + + + Y ++ G C
Sbjct: 573 FPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWC 622
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 120/256 (46%), Gaps = 1/256 (0%)
Query: 49 FSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMV 108
F +++ + ++GLV A V M + G P++++ NSL+ + + A+ V+D M+
Sbjct: 158 FDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMI 217
Query: 109 RRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNE-GLKPDVVTWTALVGGFCQVGKP 167
P V T + +++ +C+ +VD+A+ E + GL+ +VVT+ +L+ G+ +G
Sbjct: 218 SFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDV 277
Query: 168 LAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVM 227
+ M E G N+ T T ++ G K EA +F +++ + D +Y V+
Sbjct: 278 EGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVL 337
Query: 228 LDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGC 287
+DG C +T N +I G C G L EAE++ RM +
Sbjct: 338 MDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSL 397
Query: 288 PPNRCSYNVFVHGLLR 303
P+ +YN V G R
Sbjct: 398 KPDHHTYNTLVDGYCR 413
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 113/234 (48%), Gaps = 3/234 (1%)
Query: 72 MVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVF--DLMVRRGCLPSVVTYNSLIHGWCKV 129
M+ V P+V T + ++ YC +++AM VF + G +VVTYNSLI+G+ +
Sbjct: 216 MISFEVSPDVFTCSIVVNAYCRSGNVDKAM-VFAKETESSLGLELNVVTYNSLINGYAMI 274
Query: 130 KDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTC 189
DV+ +L M G+ +VVT+T+L+ G+C+ G A+ +F +KE V +
Sbjct: 275 GDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMY 334
Query: 190 TVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXX 249
V++DG + +A+ + M + + + + N +++G C
Sbjct: 335 GVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMND 394
Query: 250 XXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLR 303
D +T+N ++ G C G +DEA +L +M + P +YN+ + G R
Sbjct: 395 WSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSR 448
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 62/125 (49%), Gaps = 10/125 (8%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCV 68
P +Y LI G G + L EM KG++P++ T++ L+ G K G V A+ +
Sbjct: 753 PDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRL 812
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
+ + G+ PN +TYN+LI G + EAM++ + M+ +G L+ G K
Sbjct: 813 LHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKG----------LVRGSDK 862
Query: 129 VKDVD 133
DVD
Sbjct: 863 QGDVD 867
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 155/335 (46%), Gaps = 4/335 (1%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKG-VMPDVQTFSILVDGFGKEGLVSG 64
G+ P +V++N ++ +K GR A +E+M+ V PD TF+I++ K G S
Sbjct: 243 GVGPDLVTHNIVLSA-YKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQ 301
Query: 65 ARCVMGFMVHVGVE--PNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
A + M E P+VVT+ S++ Y ++ ++E VF+ MV G P++V+YN+L
Sbjct: 302 ALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNAL 361
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
+ + A+ +LG++ G+ PDVV++T L+ + + +P AKE+F M++ +
Sbjct: 362 MGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERR 421
Query: 183 VPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXX 242
PN+ T ++D F +EA+ +FR ME+ I ++V +L
Sbjct: 422 KPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDT 481
Query: 243 XXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLL 302
+T +N I L++A L M + + ++ + + G
Sbjct: 482 VLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSC 541
Query: 303 RKLDISRSEKYLQIMKCKGFPVDANTTELLICIYS 337
R + YL+ M+ P+ ++C YS
Sbjct: 542 RMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYS 576
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 157/357 (43%), Gaps = 7/357 (1%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGV--MPDVQTFSILVDGFGK 58
MK +K ++P ++N +I L K G+ + L M +K PDV TF+ ++ +
Sbjct: 274 MKGAK-VRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSV 332
Query: 59 EGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVT 118
+G + R V MV G++PN+V+YN+L+G Y + A+ V + + G +P VV+
Sbjct: 333 KGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVS 392
Query: 119 YNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMK 178
Y L++ + + + +A + M E KP+VVT+ AL+ + G A E+F M+
Sbjct: 393 YTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQME 452
Query: 179 EHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXX 238
+ G PN+ + +L + + ++ A + I+L+ YN +
Sbjct: 453 QDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELE 512
Query: 239 XXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFV 298
D+ TF I+I G C EA L ME+ P + Y+ +
Sbjct: 513 KAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVL 572
Query: 299 HGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLICIYSAN----KGDNAFQELQQN 351
++ ++ +E MK G D ++ Y+A+ K F E++ N
Sbjct: 573 CAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEAN 629
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 144/335 (42%), Gaps = 3/335 (0%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
++G++P IVSYN L+ G +L ++ Q G++PDV +++ L++ +G+
Sbjct: 348 AEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPG 407
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A+ V M +PNVVTYN+LI Y + EA+++F M + G P+VV+ +L+
Sbjct: 408 KAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLL 467
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
+ K +L + G+ + + + +G + + A L+ +M++
Sbjct: 468 AACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVK 527
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXX 243
+ T T+++ G + + EA+S + ME I L VY+ +L
Sbjct: 528 ADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESI 587
Query: 244 XXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLR 303
D + M+ +A EL + ME NG P+ + + + +
Sbjct: 588 FNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNK 647
Query: 304 KLDISRSEKYLQIMKCKGFPVDANTTELLICIYSA 338
S + +M+ K P T + I+SA
Sbjct: 648 GGQPSNVFVLMDLMREKEIPF---TGAVFFEIFSA 679
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 122/290 (42%), Gaps = 4/290 (1%)
Query: 14 YNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMV 73
YN +I+ + + GL +EM + PD +T+ L++ G+ G A +M M+
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 205
Query: 74 HVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVD 133
+ P+ TYN+LI EA++V M G P +VT+N ++ + +
Sbjct: 206 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 265
Query: 134 RAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ--VPNLQTCTV 191
+A+ M ++PD T+ ++ ++G+ A +LF +M+E P++ T T
Sbjct: 266 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 325
Query: 192 ILDGLFKCRFHSEA-MSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXX 250
I+ L+ + E ++F AM + +IV YN ++
Sbjct: 326 IMH-LYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN 384
Query: 251 XXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHG 300
D ++ ++ +A+E+ + M + PN +YN +
Sbjct: 385 GIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDA 434
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/321 (19%), Positives = 140/321 (43%), Gaps = 8/321 (2%)
Query: 38 MQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQM 97
+QK +++++ + V AR + M +P+ TY++LI + Q
Sbjct: 135 IQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQW 194
Query: 98 EEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTAL 157
AM + D M+R PS TYN+LI+ + A+ + +M + G+ PD+VT +
Sbjct: 195 RWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIV 254
Query: 158 VGGFCQVGKPLAAKELFFTMKEHGQV-PNLQTCTVILDGLFKCRFHSEAMSLFRAM--EK 214
+ + + G+ + +F + + +V P+ T +I+ L K S+A+ LF +M ++
Sbjct: 255 LSAY-KSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKR 313
Query: 215 SDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDE 274
++ D+V + ++ + ++N ++ G+
Sbjct: 314 AECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGT 373
Query: 275 AEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLIC 334
A +L +++NG P+ SY ++ R ++++ +M+ + + T LI
Sbjct: 374 ALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALID 433
Query: 335 IYSAN----KGDNAFQELQQN 351
Y +N + F++++Q+
Sbjct: 434 AYGSNGFLAEAVEIFRQMEQD 454
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 153/330 (46%), Gaps = 4/330 (1%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCV 68
P++ +YN +++ + + ++ GL EM Q+ + PD T+S L+ FGKEG+ A
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW 212
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
+ M V ++V Y++LI +A+ +F + R G P +V YNS+I+ + K
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGK 272
Query: 129 VKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQT 188
K A L+ EM G+ P+ V+++ L+ + + K L A +F MKE +L T
Sbjct: 273 AKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTT 332
Query: 189 CTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXX 248
C +++D + EA LF ++ K DI+ ++V YN +L
Sbjct: 333 CNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQ 392
Query: 249 XXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVH--GLLRKLD 306
+ T+N MI+ ++A L+ M+ G PN +Y+ + G KLD
Sbjct: 393 RKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLD 452
Query: 307 ISRSEKYLQIMKCKGFPVDANTTELLICIY 336
R+ Q ++ G +D + +I Y
Sbjct: 453 --RAATLFQKLRSSGVEIDQVLYQTMIVAY 480
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 98/179 (54%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
N G+ P VSY+ L+ + ++ E + EM + D+ T +I++D +G+ +V
Sbjct: 287 NEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMV 346
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
A + + + +EPNVV+YN+++ Y EA+ +F LM R+ +VVTYN++
Sbjct: 347 KEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTM 406
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHG 181
I + K + ++A L+ EM + G++P+ +T++ ++ + + GK A LF ++ G
Sbjct: 407 IKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSG 465
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 100/203 (49%), Gaps = 6/203 (2%)
Query: 28 KEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSL 87
KE L + + + + P+V +++ ++ +G+ L A + M +E NVVTYN++
Sbjct: 347 KEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTM 406
Query: 88 IGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGL 147
I Y + E+A + M RG P+ +TY+++I W K +DRA L ++ + G+
Sbjct: 407 IKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGV 466
Query: 148 KPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMS 207
+ D V + ++ + +VG AK L +K +P T+ L K EA
Sbjct: 467 EIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITI----LAKAGRTEEATW 522
Query: 208 LFR-AMEKSDIDLDIVVYNVMLD 229
+FR A E ++ DI V+ M++
Sbjct: 523 VFRQAFESGEVK-DISVFGCMIN 544
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 109/223 (48%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
GI P +V+YN +I K ++E L+ EM + GV+P+ ++S L+ + + A
Sbjct: 255 GITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEA 314
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
V M V ++ T N +I Y ++EA ++F + + P+VV+YN+++
Sbjct: 315 LSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRV 374
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+ + + AI L M + ++ +VVT+ ++ + + + A L M+ G PN
Sbjct: 375 YGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPN 434
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVML 228
T + I+ K A +LF+ + S +++D V+Y M+
Sbjct: 435 AITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMI 477
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 94/210 (44%), Gaps = 4/210 (1%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
K I+ +V+YN +I+ K ++ L+ EM +G+ P+ T+S ++ +GK G +
Sbjct: 394 KDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDR 453
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A + + GVE + V Y ++I Y M A ++ + LP + + I
Sbjct: 454 AATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHEL----KLPDNIPRETAIT 509
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
K + A + + G D+ + ++ + + + + E+F M+ G P
Sbjct: 510 ILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFP 569
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEK 214
+ ++L+ K R +A +++R M++
Sbjct: 570 DSNVIAMVLNAYGKQREFEKADTVYREMQE 599
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 159/324 (49%), Gaps = 7/324 (2%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G +P+++SY L+ + ++ + ++ E+ Q G D F+ +++ F + G + A
Sbjct: 75 GHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDA 134
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCL---PSVVTYNSL 122
+ M +G+ P TYN+LI GY + + E + ++ DLM+ G + P++ T+N L
Sbjct: 135 VQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVL 194
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELF---FTMKE 179
+ WCK K V+ A ++ +M G++PD VT+ + + Q G+ + A+ MKE
Sbjct: 195 VQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKE 254
Query: 180 HGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXX 239
+ PN +TC +++ G + + + R M++ ++ ++VV+N +++G
Sbjct: 255 KAK-PNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDG 313
Query: 240 XXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVH 299
D T++ ++ G +++A ++ M + G P+ +Y++
Sbjct: 314 IDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAK 373
Query: 300 GLLRKLDISRSEKYLQIMKCKGFP 323
G +R + ++E+ L+ + + P
Sbjct: 374 GYVRAKEPKKAEELLETLIVESRP 397
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 160/353 (45%), Gaps = 13/353 (3%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKG---VMPDVQTFSILVDGFGKEGLV 62
G+ PT +YN LI+G G+ + + LL M+++G V P+++TF++LV + K+ V
Sbjct: 145 GLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKV 204
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQM--EEAMKVFDLMVRRGCLPSVVTYN 120
A V+ M GV P+ VTYN++ Y + + E+ V ++++ P+ T
Sbjct: 205 EEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCG 264
Query: 121 SLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEH 180
++ G+C+ V + + M ++ ++V + +L+ GF +V E+ MKE
Sbjct: 265 IVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKEC 324
Query: 181 GQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXX 240
++ T + +++ + +A +F+ M K+ + D Y+++ G
Sbjct: 325 NVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKA 384
Query: 241 XXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHG 300
+ F +I G C G +D+A + +M + G PN ++ + G
Sbjct: 385 EELLETLIVESRP-NVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWG 443
Query: 301 LLRKLDISRSEKYLQIMKCKGFPVDANTTELLICIY-------SANKGDNAFQ 346
L ++E+ LQ+M+ G + +T LL + +NK NA +
Sbjct: 444 YLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALK 496
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 132/312 (42%), Gaps = 9/312 (2%)
Query: 46 VQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFD 105
V++ + L++ + G A+ V + G P++++Y +L+ ++ Q +
Sbjct: 45 VRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVS 104
Query: 106 LMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVG 165
+ + G + +N++I+ + + +++ A+ L +M GL P T+ L+ G+ G
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAG 164
Query: 166 KPLAAKELFFTMKEHGQV---PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIV 222
KP + EL M E G V PN++T V++ K + EA + + ME+ + D V
Sbjct: 165 KPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTV 224
Query: 223 VYNVMLDGMCXX--XXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLM 280
YN + + T I++ G C EG + + +
Sbjct: 225 TYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVR 284
Query: 281 RMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLICIYSA-- 338
RM+E N +N ++G + +D ++ L +MK D T ++ +S+
Sbjct: 285 RMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAG 344
Query: 339 --NKGDNAFQEL 348
K F+E+
Sbjct: 345 YMEKAAQVFKEM 356
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 107/214 (50%), Gaps = 3/214 (1%)
Query: 7 IQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQK-GVMPDVQTFSILVDGFGKEGLVSGA 65
++ +V +N LI G + ++G + +M++ V DV T+S +++ + G + A
Sbjct: 291 VEANLVVFNSLINGFVEVMD-RDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKA 349
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
V MV GV+P+ Y+ L GY + ++A ++ + ++ P+VV + ++I G
Sbjct: 350 AQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISG 408
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
WC +D A+ + +M G+ P++ T+ L+ G+ +V +P A+E+ M+ G P
Sbjct: 409 WCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPE 468
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDL 219
T ++ + E+ A++ DI++
Sbjct: 469 NSTFLLLAEAWRVAGLTDESNKAINALKCKDIEI 502
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 140/315 (44%)
Query: 14 YNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMV 73
++ L + +++ +M G +P V++ + + +G V A M
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 74 HVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVD 133
+ PN T N ++ GYC ++++ +++ M R G + V+YN+LI G C+ +
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 134 RAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVIL 193
A+ L M GL+P+VVT+ L+ GFC+ K A ++F MK PN T ++
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 194 DGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXX 253
+G + H A + M + I DI+ YN ++ G+C
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLV 410
Query: 254 FDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKY 313
++ TF+ +I G C D EL M +GC PN ++N+ V R D + +
Sbjct: 411 PNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQV 470
Query: 314 LQIMKCKGFPVDANT 328
L+ M + P+D+ T
Sbjct: 471 LREMVRRSIPLDSRT 485
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 134/277 (48%)
Query: 7 IQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGAR 66
I P + N ++ G + G+ +G LL +M + G +++ L+ G ++GL+S A
Sbjct: 234 ISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSAL 293
Query: 67 CVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGW 126
+ M G++PNVVT+N+LI G+C +++EA KVF M P+ VTYN+LI+G+
Sbjct: 294 KLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGY 353
Query: 127 CKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNL 186
+ D + A +MV G++ D++T+ AL+ G C+ K A + + + VPN
Sbjct: 354 SQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNS 413
Query: 187 QTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXX 246
T + ++ G + L+++M +S + +N+++ C
Sbjct: 414 STFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLRE 473
Query: 247 XXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRME 283
D+ T + + GL +G ++LL ME
Sbjct: 474 MVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEME 510
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 90/234 (38%), Gaps = 2/234 (0%)
Query: 102 KVFD--LMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVG 159
KVFD L R C + ++SL + +K A +M + G P V + A +
Sbjct: 152 KVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMS 211
Query: 160 GFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDL 219
G+ A + M+ PN T +++ G + + + L + ME+
Sbjct: 212 SLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRA 271
Query: 220 DIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELL 279
V YN ++ G C + TFN +I G C L EA ++
Sbjct: 272 TDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVF 331
Query: 280 MRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLI 333
M+ PN +YN ++G ++ D + ++ + M C G D T LI
Sbjct: 332 GEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALI 385
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 79/190 (41%), Gaps = 1/190 (0%)
Query: 154 WTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAME 213
+ +L F + K A + F MK++G +P +++C + L A+ +R M
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 214 KSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLD 273
+ I + N+++ G C ++N +I G C +GLL
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 274 EAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLI 333
A +L M ++G PN ++N +HG R + + + K MK + T LI
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 334 CIYSANKGDN 343
YS +GD+
Sbjct: 351 NGYS-QQGDH 359
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 140/315 (44%)
Query: 14 YNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMV 73
++ L + +++ +M G +P V++ + + +G V A M
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 74 HVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVD 133
+ PN T N ++ GYC ++++ +++ M R G + V+YN+LI G C+ +
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 134 RAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVIL 193
A+ L M GL+P+VVT+ L+ GFC+ K A ++F MK PN T ++
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 194 DGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXX 253
+G + H A + M + I DI+ YN ++ G+C
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLV 410
Query: 254 FDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKY 313
++ TF+ +I G C D EL M +GC PN ++N+ V R D + +
Sbjct: 411 PNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQV 470
Query: 314 LQIMKCKGFPVDANT 328
L+ M + P+D+ T
Sbjct: 471 LREMVRRSIPLDSRT 485
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 134/277 (48%)
Query: 7 IQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGAR 66
I P + N ++ G + G+ +G LL +M + G +++ L+ G ++GL+S A
Sbjct: 234 ISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSAL 293
Query: 67 CVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGW 126
+ M G++PNVVT+N+LI G+C +++EA KVF M P+ VTYN+LI+G+
Sbjct: 294 KLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGY 353
Query: 127 CKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNL 186
+ D + A +MV G++ D++T+ AL+ G C+ K A + + + VPN
Sbjct: 354 SQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNS 413
Query: 187 QTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXX 246
T + ++ G + L+++M +S + +N+++ C
Sbjct: 414 STFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLRE 473
Query: 247 XXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRME 283
D+ T + + GL +G ++LL ME
Sbjct: 474 MVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEME 510
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 90/234 (38%), Gaps = 2/234 (0%)
Query: 102 KVFD--LMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVG 159
KVFD L R C + ++SL + +K A +M + G P V + A +
Sbjct: 152 KVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMS 211
Query: 160 GFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDL 219
G+ A + M+ PN T +++ G + + + L + ME+
Sbjct: 212 SLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRA 271
Query: 220 DIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELL 279
V YN ++ G C + TFN +I G C L EA ++
Sbjct: 272 TDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVF 331
Query: 280 MRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLI 333
M+ PN +YN ++G ++ D + ++ + M C G D T LI
Sbjct: 332 GEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALI 385
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 79/190 (41%), Gaps = 1/190 (0%)
Query: 154 WTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAME 213
+ +L F + K A + F MK++G +P +++C + L A+ +R M
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 214 KSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLD 273
+ I + N+++ G C ++N +I G C +GLL
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 274 EAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLI 333
A +L M ++G PN ++N +HG R + + + K MK + T LI
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 334 CIYSANKGDN 343
YS +GD+
Sbjct: 351 NGYS-QQGDH 359
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 139/300 (46%), Gaps = 5/300 (1%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+ I YN L+ K G ++ LL EM +KGV PD+ T++ L+ + K+ + A
Sbjct: 198 GVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEA 257
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
V M GV PN+VTYNS I G+ +M EA ++F ++ + VTY +LI G
Sbjct: 258 LSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFR-EIKDDVTANHVTYTTLIDG 316
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+C++ D+D A+ L M + G P VVT+ +++ C+ G+ A L M P+
Sbjct: 317 YCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPD 376
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
TC +++ K A+ + + M +S + LD+ Y ++ G C
Sbjct: 377 NITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELF 436
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
T++ ++ G + DE +LL E+ G C+ GL+R++
Sbjct: 437 SMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGL----CADVALYRGLIRRI 492
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 119/227 (52%), Gaps = 1/227 (0%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+ P IV+YN I G + GR +E L E+ + V + T++ L+DG+ + + A
Sbjct: 268 GVAPNIVTYNSFIHGFSREGRMREATRLFREI-KDDVTANHVTYTTLIDGYCRMNDIDEA 326
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ M G P VVTYNS++ C ++ EA ++ M + P +T N+LI+
Sbjct: 327 LRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINA 386
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+CK++D+ A+ + +M+ GLK D+ ++ AL+ GFC+V + AKE F+M E G P
Sbjct: 387 YCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPG 446
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMC 232
T + ++DG + E L EK + D+ +Y ++ +C
Sbjct: 447 YATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRIC 493
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 138/311 (44%), Gaps = 2/311 (0%)
Query: 41 GVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEA 100
G+ P +Q ++L++ K+ L + MV +GV N+ YN L+ E+A
Sbjct: 163 GLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKA 222
Query: 101 MKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGG 160
K+ M +G P + TYN+LI +CK A+ + M G+ P++VT+ + + G
Sbjct: 223 EKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHG 282
Query: 161 FCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLD 220
F + G+ A LF +K+ N T T ++DG + EA+ L ME
Sbjct: 283 FSREGRMREATRLFREIKD-DVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPG 341
Query: 221 IVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLM 280
+V YN +L +C D T N +I C + A ++
Sbjct: 342 VVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKK 401
Query: 281 RMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGF-PVDANTTELLICIYSAN 339
+M E+G + SY +HG + L++ +++ L M KGF P A + L+ Y+ N
Sbjct: 402 KMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQN 461
Query: 340 KGDNAFQELQQ 350
K D + L++
Sbjct: 462 KQDEITKLLEE 472
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 125/287 (43%), Gaps = 1/287 (0%)
Query: 47 QTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDL 106
FS L+ + K G+++ + V + G++P++ L+ + + K+F
Sbjct: 134 HVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKK 193
Query: 107 MVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGK 166
MV+ G + ++ YN L+H K D ++A LL EM +G+ PD+ T+ L+ +C+
Sbjct: 194 MVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSM 253
Query: 167 PLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNV 226
A + M+ G PN+ T + G + EA LFR + K D+ + V Y
Sbjct: 254 HFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREI-KDDVTANHVTYTT 312
Query: 227 MLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENG 286
++DG C T+N ++R LC +G + EA LL M
Sbjct: 313 LIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKK 372
Query: 287 CPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLI 333
P+ + N ++ + D+ + K + M G +D + + LI
Sbjct: 373 IEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALI 419
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 114/222 (51%), Gaps = 2/222 (0%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGK-EGLV 62
S+G P +V+YN +++ L + GR +E LL EM K + PD T + L++ + K E +V
Sbjct: 335 SRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMV 394
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
S + V M+ G++ ++ +Y +LI G+C ++E A + M+ +G P TY+ L
Sbjct: 395 SAVK-VKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWL 453
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
+ G+ D LL E GL DV + L+ C++ + AK LF +M++ G
Sbjct: 454 VDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGL 513
Query: 183 VPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVY 224
V + T + ++ +EA +LF M + +++ +Y
Sbjct: 514 VGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLY 555
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 153/316 (48%), Gaps = 2/316 (0%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G +P++++Y L+ L + + L+ ++ + G+ PD F+ +++ + G +
Sbjct: 348 EGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQ 407
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCL-PSVVTYNSLI 123
A + M G +P T+N+LI GY ++EE+ ++ D+M+R L P+ T N L+
Sbjct: 408 AMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILV 467
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
WC + ++ A ++ +M + G+KPDVVT+ L + ++G A+++ H +V
Sbjct: 468 QAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKV 527
Query: 184 -PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXX 242
PN++TC I++G + EA+ F M++ + ++ V+N ++ G
Sbjct: 528 KPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGE 587
Query: 243 XXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLL 302
D TF+ ++ G + EE+ M E G P+ ++++ G
Sbjct: 588 VVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYA 647
Query: 303 RKLDISRSEKYLQIMK 318
R + ++E+ L M+
Sbjct: 648 RAGEPEKAEQILNQMR 663
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 137/296 (46%), Gaps = 2/296 (0%)
Query: 7 IQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGAR 66
+QP + N L+Q + +E ++Y+M GV PDV TF+ L + + G A
Sbjct: 456 LQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAE 515
Query: 67 -CVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ M+H V+PNV T +++ GYC +MEEA++ F M G P++ +NSLI G
Sbjct: 516 DMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKG 575
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+ + D+D ++ M G+KPDVVT++ L+ + VG +E++ M E G P+
Sbjct: 576 FLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPD 635
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+ +++ G + +A + M K + ++V+Y ++ G C
Sbjct: 636 IHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYK 695
Query: 246 XX-XXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHG 300
+ T+ +I G +AEELL ME P R + + G
Sbjct: 696 KMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADG 751
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 156/349 (44%), Gaps = 3/349 (0%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G++P + +N +I + G + + +M + G P TF+ L+ G+GK G + +
Sbjct: 384 GLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEES 443
Query: 66 RCVMGFMVHVG-VEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
++ M+ ++PN T N L+ +C + ++EEA + M G P VVT+N+L
Sbjct: 444 SRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAK 503
Query: 125 GWCKVKDVDRA-ICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
+ ++ A ++ M++ +KP+V T +V G+C+ GK A F+ MKE G
Sbjct: 504 AYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVH 563
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXX 243
PNL ++ G + ME+ + D+V ++ +++
Sbjct: 564 PNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEI 623
Query: 244 XXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLR 303
D + F+I+ +G G ++AE++L +M + G PN Y + G
Sbjct: 624 YTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCS 683
Query: 304 KLDISRS-EKYLQIMKCKGFPVDANTTELLICIYSANKGDNAFQELQQN 351
++ ++ + Y ++ G + T E LI + K +EL ++
Sbjct: 684 AGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKD 732
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 112/210 (53%), Gaps = 1/210 (0%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLY-EMMQKGVMPDVQTFSILVDGFGKEGLV 62
S G++P +V++N L + + G ++ M+ V P+V+T +V+G+ +EG +
Sbjct: 488 SYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKM 547
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
A M +GV PN+ +NSLI G+ + M+ +V DLM G P VVT+++L
Sbjct: 548 EEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTL 607
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
++ W V D+ R + +M+ G+ PD+ ++ L G+ + G+P A+++ M++ G
Sbjct: 608 MNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGV 667
Query: 183 VPNLQTCTVILDGLFKCRFHSEAMSLFRAM 212
PN+ T I+ G +AM +++ M
Sbjct: 668 RPNVVIYTQIISGWCSAGEMKKAMQVYKKM 697
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 103/192 (53%), Gaps = 3/192 (1%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQK-GVMPDVQTFSILVDGFGKEGLVSG 64
G+ P + +N LI+G +G G + ++M++ GV PDV TFS L++ + G +
Sbjct: 561 GVHPNLFVFNSLIKGFLNINDM-DGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKR 619
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
+ M+ G++P++ ++ L GY + E+A ++ + M + G P+VV Y +I
Sbjct: 620 CEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIIS 679
Query: 125 GWCKVKDVDRAICLLGEMVN-EGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
GWC ++ +A+ + +M GL P++ T+ L+ GF + +P A+EL M+ V
Sbjct: 680 GWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVV 739
Query: 184 PNLQTCTVILDG 195
P +T +I DG
Sbjct: 740 PTRKTMQLIADG 751
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 129/296 (43%), Gaps = 2/296 (0%)
Query: 45 DVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVF 104
DV++ + L++G + G A + ++ G +P+++TY +L+ + + +
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 105 DLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQV 164
+ + G P + +N++I+ + ++D+A+ + +M G KP T+ L+ G+ ++
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 165 GKPLAAKELFFTM-KEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVV 223
GK + L M ++ PN +TC +++ R EA ++ M+ + D+V
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 224 YNVMLDGMCXXXXX-XXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRM 282
+N + + T ++ G C EG ++EA RM
Sbjct: 498 FNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRM 557
Query: 283 EENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLICIYSA 338
+E G PN +N + G L D+ + + +M+ G D T L+ +S+
Sbjct: 558 KELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSS 613
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 1/125 (0%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
GI P I +++ L +G + G ++ +L +M + GV P+V ++ ++ G+ G + A
Sbjct: 631 GIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKA 690
Query: 66 RCVMGFMVH-VGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
V M VG+ PN+ TY +LI G+ Q +A ++ M + +P+ T +
Sbjct: 691 MQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIAD 750
Query: 125 GWCKV 129
GW +
Sbjct: 751 GWKSI 755
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 131/259 (50%), Gaps = 4/259 (1%)
Query: 59 EGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVT 118
+G + A + M++ GV P ++T+N L+ G C +E+A + M G P+ V+
Sbjct: 134 QGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVS 193
Query: 119 YNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGK-PLAAKELFFTM 177
YN+LI G C V +VD+A+ L M G++P+ VT +V CQ G K+L +
Sbjct: 194 YNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEI 253
Query: 178 KEHGQVP---NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXX 234
+ Q ++ CT+++D FK +A+ +++ M + ++ D VVYNV++ G+C
Sbjct: 254 LDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSS 313
Query: 235 XXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSY 294
D +T+N +I LC EG DEA +L M+ G P++ SY
Sbjct: 314 GNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISY 373
Query: 295 NVFVHGLLRKLDISRSEKY 313
V + GL D++R+ ++
Sbjct: 374 KVIIQGLCIHGDVNRANEF 392
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 123/276 (44%)
Query: 11 IVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMG 70
IV L+ FK G + + EM QK V D +++++ G G + A M
Sbjct: 265 IVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMC 324
Query: 71 FMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVK 130
MV GV P+V TYN+LI C + +EA + M G P ++Y +I G C
Sbjct: 325 DMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHG 384
Query: 131 DVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCT 190
DV+RA L M+ L P+V+ W ++ G+ + G +A + M +G PN+ T
Sbjct: 385 DVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNN 444
Query: 191 VILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXX 250
++ G K +A + M + I D YN++L C
Sbjct: 445 ALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRR 504
Query: 251 XXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENG 286
D T+ ++RGLCW+G L +AE LL R++ G
Sbjct: 505 GCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATG 540
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 138/327 (42%), Gaps = 4/327 (1%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRW-KEGAGLLYEMM---QKGVMPDVQTFSILVDGFGK 58
N GI+P V+ N ++ L + G LL E++ Q D+ +IL+D K
Sbjct: 218 NKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFK 277
Query: 59 EGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVT 118
G V A V M V + V YN +I G C M A MV+RG P V T
Sbjct: 278 NGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFT 337
Query: 119 YNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMK 178
YN+LI CK D A L G M N G+ PD +++ ++ G C G A E +M
Sbjct: 338 YNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSML 397
Query: 179 EHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXX 238
+ +P + V++DG + S A+S+ M + ++ N ++ G
Sbjct: 398 KSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLI 457
Query: 239 XXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFV 298
DT T+N+++ C G L A +L M GC P+ +Y V
Sbjct: 458 DAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELV 517
Query: 299 HGLLRKLDISRSEKYLQIMKCKGFPVD 325
GL K + ++E L ++ G +D
Sbjct: 518 RGLCWKGRLKKAESLLSRIQATGITID 544
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 114/224 (50%), Gaps = 2/224 (0%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G+ P + +YN LI L K G++ E L M GV PD ++ +++ G G V+
Sbjct: 329 RGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNR 388
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A + M+ + P V+ +N +I GY A+ V +LM+ G P+V T N+LIH
Sbjct: 389 ANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIH 448
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G+ K + A + EM + + PD T+ L+G C +G A +L+ M G P
Sbjct: 449 GYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQP 508
Query: 185 NLQTCTVILDGL-FKCRFHSEAMSLFRAMEKSDIDLDIVVYNVM 227
++ T T ++ GL +K R +A SL ++ + I +D V + ++
Sbjct: 509 DIITYTELVRGLCWKGRL-KKAESLLSRIQATGITIDHVPFLIL 551
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 80/159 (50%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCV 68
P ++ +N +I G ++G +L M+ GV P+V T + L+ G+ K G + A V
Sbjct: 403 PEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWV 462
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
M + P+ TYN L+G C + A +++D M+RRGC P ++TY L+ G C
Sbjct: 463 KNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCW 522
Query: 129 VKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKP 167
+ +A LL + G+ D V + L + ++ +P
Sbjct: 523 KGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRP 561
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 144/301 (47%), Gaps = 7/301 (2%)
Query: 7 IQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGAR 66
+ P +V++N L+ L K ++ A ++E M+ PD +T+SIL++G+GKE + AR
Sbjct: 199 LPPNLVAFNGLLSALCKSKNVRK-AQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAR 257
Query: 67 CVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGW 126
V M+ G P++VTY+ ++ C +++EA+ + M C P+ Y+ L+H +
Sbjct: 258 EVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTY 317
Query: 127 CKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNL 186
++ A+ EM G+K DV + +L+G FC+ + + MK G PN
Sbjct: 318 GTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNS 377
Query: 187 QTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXX 246
++C +IL L + EA +FR M K + D Y +++ C
Sbjct: 378 KSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWKY 436
Query: 247 XXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLD 306
+TF+++I GLC E +A LL M E G P+ ++ G LR+L
Sbjct: 437 MRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTF-----GRLRQLL 491
Query: 307 I 307
I
Sbjct: 492 I 492
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 152/332 (45%), Gaps = 3/332 (0%)
Query: 2 KNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGL 61
+ + + ++ +Y+ +I+ K ++K L+ M+K M +V+TF I++ + +
Sbjct: 125 EKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLI-NAMRKKKMLNVETFCIVMRKYARAQK 183
Query: 62 VSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNS 121
V A M + PN+V +N L+ C + +A +VF+ M R P TY+
Sbjct: 184 VDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM-RDRFTPDSKTYSI 242
Query: 122 LIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHG 181
L+ GW K ++ +A + EM++ G PD+VT++ +V C+ G+ A + +M
Sbjct: 243 LLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSI 302
Query: 182 QVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXX 241
P +V++ EA+ F ME+S + D+ V+N ++ C
Sbjct: 303 CKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVY 362
Query: 242 XXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGL 301
++ + NI++R L G DEA ++ +M + C P+ +Y + +
Sbjct: 363 RVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VCEPDADTYTMVIKMF 421
Query: 302 LRKLDISRSEKYLQIMKCKGFPVDANTTELLI 333
K ++ ++K + M+ KG +T +LI
Sbjct: 422 CEKKEMETADKVWKYMRKKGVFPSMHTFSVLI 453
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 104/207 (50%), Gaps = 1/207 (0%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G P IV+Y+ ++ L K GR E G++ M P +S+LV +G E + A
Sbjct: 267 GCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEA 326
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
M G++ +V +NSLIG +C ++M+ +V M +G P+ + N ++
Sbjct: 327 VDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRH 386
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+ + D A + +M+ + +PD T+T ++ FC+ + A +++ M++ G P+
Sbjct: 387 LIERGEKDEAFDVFRKMI-KVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPS 445
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAM 212
+ T +V+++GL + R +A L M
Sbjct: 446 MHTFSVLINGLCEERTTQKACVLLEEM 472
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 145/331 (43%), Gaps = 2/331 (0%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
SKG++P SYN +I GL K G LL E + P T+ +L++ KE
Sbjct: 335 SKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTG 394
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
AR V+ M+ YN + G C+ E + V M++ C P T N++I
Sbjct: 395 KARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVI 454
Query: 124 HGWCKVKDVDRAICLLGEMVNEGL-KPDVVTWTALVGGFCQVGKPLAAKELF-FTMKEHG 181
+G CK+ VD A+ +L +M+ PD VT ++ G G+ A ++ M E+
Sbjct: 455 NGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENK 514
Query: 182 QVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXX 241
P + ++ GLFK EAMS+F +EK+ + D Y +++DG+C
Sbjct: 515 IKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAK 574
Query: 242 XXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGL 301
D + + ++GLC G L +A L + ++G PN YN +
Sbjct: 575 KFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAEC 634
Query: 302 LRKLDISRSEKYLQIMKCKGFPVDANTTELL 332
R + + L+ M+ G DA T +L
Sbjct: 635 SRSGLKREAYQILEEMRKNGQAPDAVTWRIL 665
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 158/366 (43%), Gaps = 35/366 (9%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G +P ++ + +I L GR+ E + G +PD +T ++++
Sbjct: 84 RGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVS 143
Query: 65 ARCVMGFMVHVGVE--PNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
V+ ++ E P++ YN L+ C +++ +A K+ M RG LP VVT+ +L
Sbjct: 144 TLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTL 203
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGF-----CQVGKPLAAKELFFTM 177
I G+C++++++ A + EM G++P+ +T + L+GGF + G+ L KEL+ M
Sbjct: 204 IGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKL-MKELWEYM 262
Query: 178 KEHGQVPNLQTCTVIL------DGLFKCRFH-SEAMSLFRAMEKSDIDLDIVVYNVMLDG 230
K L +G F F +E MSL E +++ Y M+D
Sbjct: 263 KNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSL---CESVNVEF---AYGHMIDS 316
Query: 231 MCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPN 290
+C ++N +I GLC +G A +LL E P+
Sbjct: 317 LCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPS 376
Query: 291 RCSYNVFVHGLLRKLDISRSEKYLQIM--------------KCKGFPVDANTTELLICIY 336
+Y + + L ++LD ++ L++M +G V N TE+L +
Sbjct: 377 EYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLV 436
Query: 337 SANKGD 342
S +GD
Sbjct: 437 SMLQGD 442
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 150/361 (41%), Gaps = 15/361 (4%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
M+N +G P +V++ LI G + + + EM G+ P+ T S+L+ GF K
Sbjct: 188 MRN-RGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMR 246
Query: 61 LVSGARCVMG----FMVH-VGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPS 115
V R +M +M + + +L+ C + ++ + M +
Sbjct: 247 DVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNV 306
Query: 116 VVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFF 175
Y +I C+ + A ++ M ++GLKP ++ A++ G C+ G + A +L
Sbjct: 307 EFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLE 366
Query: 176 TMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXX 235
E P+ T ++++ L K +A ++ M + + +YN+ L G+C
Sbjct: 367 EGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMD 426
Query: 236 XXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENG-CPPNRCSY 294
D YT N +I GLC G +D+A ++L M C P+ +
Sbjct: 427 NPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTL 486
Query: 295 NVFVHGLLRKLDISRSEKYLQIM-----KCKGFPVDANTTELLICIYSANKGDNAFQELQ 349
N + GLL + R+E+ L ++ + K P ++ ++ +KGD A
Sbjct: 487 NTVMCGLLAQ---GRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFG 543
Query: 350 Q 350
Q
Sbjct: 544 Q 544
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 83/210 (39%), Gaps = 3/210 (1%)
Query: 109 RRGCLPSVVTYNSLIHGWCKVK-DVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKP 167
RR + + IH C V+ + D A+ +L + G +PD + ++++ C G+
Sbjct: 47 RRRSVTDRAYWRRRIHSICAVRRNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRF 106
Query: 168 LAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAME--KSDIDLDIVVYN 225
A F G +P+ +TC VI+ L R + + + K + + YN
Sbjct: 107 DEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYN 166
Query: 226 VMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEEN 285
+++ +C D TF +I G C L+ A ++ M
Sbjct: 167 RLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVC 226
Query: 286 GCPPNRCSYNVFVHGLLRKLDISRSEKYLQ 315
G PN + +V + G L+ D+ K ++
Sbjct: 227 GIRPNSLTLSVLIGGFLKMRDVETGRKLMK 256
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 148/336 (44%), Gaps = 1/336 (0%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
GI+P +YN L++G K G K+ ++ EM ++GV PD T+S+L+D + G A
Sbjct: 334 GIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESA 393
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
R V+ M V+PN ++ L+ G+ R + ++ +V M G P YN +I
Sbjct: 394 RIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDT 453
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+ K +D A+ M++EG++PD VTW L+ C+ G+ + A+E+F M+ G +P
Sbjct: 454 FGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPC 513
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
T ++++ + L M+ I ++V + ++D
Sbjct: 514 ATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLE 573
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
+ +N +I GL ++A M +G P+ + N ++
Sbjct: 574 EMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDR 633
Query: 306 DISRSEKYLQIMKCKGFPVDANT-TELLICIYSANK 340
+ + LQ MK G D T T L+ + +K
Sbjct: 634 RDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDK 669
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 87/162 (53%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G P +YN +I RW + LL +M +G++P+V T + LVD +GK G +
Sbjct: 508 RGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFND 567
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A + M VG++P+ YN+LI Y R E+A+ F +M G PS++ NSLI+
Sbjct: 568 AIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLIN 627
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGK 166
+ + + A +L M G+KPDVVT+T L+ +V K
Sbjct: 628 AFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDK 669
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 102/196 (52%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
S+GI+P V++N LI K GR + M ++G +P T++I+++ +G +
Sbjct: 472 SEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWD 531
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
+ ++G M G+ PNVVT+ +L+ Y + +A++ + M G PS YN+LI
Sbjct: 532 DMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALI 591
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
+ + + ++A+ M ++GLKP ++ +L+ F + + A + MKE+G
Sbjct: 592 NAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVK 651
Query: 184 PNLQTCTVILDGLFKC 199
P++ T T ++ L +
Sbjct: 652 PDVVTYTTLMKALIRV 667
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 139/333 (41%), Gaps = 2/333 (0%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGL-LYEMMQKGVMP-DVQTFSILVDGFGKEGLVS 63
G Q V+Y+ +IQ L + + L LY+ +++ + DVQ + ++ GF K G S
Sbjct: 227 GYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPS 286
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A ++G G+ T S+I + EA +F+ + + G P YN+L+
Sbjct: 287 KALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALL 346
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
G+ K + A ++ EM G+ PD T++ L+ + G+ +A+ + M+
Sbjct: 347 KGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQ 406
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXX 243
PN + +L G + + + M+ + D YNV++D
Sbjct: 407 PNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTT 466
Query: 244 XXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLR 303
D T+N +I C G AEE+ ME GC P +YN+ ++
Sbjct: 467 FDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGD 526
Query: 304 KLDISRSEKYLQIMKCKGFPVDANTTELLICIY 336
+ ++ L MK +G + T L+ +Y
Sbjct: 527 QERWDDMKRLLGKMKSQGILPNVVTHTTLVDVY 559
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 135/338 (39%), Gaps = 8/338 (2%)
Query: 15 NCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVH 74
N +I G K G + LL G+ T ++ G A + +
Sbjct: 273 NDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQ 332
Query: 75 VGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDR 134
G++P YN+L+ GY +++A + M +RG P TY+ LI + +
Sbjct: 333 SGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWES 392
Query: 135 AICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILD 194
A +L EM ++P+ ++ L+ GF G+ ++ MK G P+ Q V++D
Sbjct: 393 ARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVID 452
Query: 195 --GLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXX 252
G F C H AM+ F M I+ D V +N ++D C
Sbjct: 453 TFGKFNCLDH--AMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGC 510
Query: 253 XFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEK 312
T+NIMI + D+ + LL +M+ G PN ++ V + + + +
Sbjct: 511 LPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIE 570
Query: 313 YLQIMKCKGFPVDANTTELLICIYS----ANKGDNAFQ 346
L+ MK G + LI Y+ + + NAF+
Sbjct: 571 CLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFR 608
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 134/350 (38%), Gaps = 1/350 (0%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
M + G+ + +I L GR E L E+ Q G+ P + ++ L+ G+ K G
Sbjct: 294 MAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTG 353
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
+ A ++ M GV P+ TY+ LI Y + E A V M P+ ++
Sbjct: 354 PLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFS 413
Query: 121 SLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEH 180
L+ G+ + + +L EM + G+KPD + ++ F + A F M
Sbjct: 414 RLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSE 473
Query: 181 GQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXX 240
G P+ T ++D K H A +F AME+ YN+M++
Sbjct: 474 GIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDM 533
Query: 241 XXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHG 300
+ T ++ G ++A E L M+ G P+ YN ++
Sbjct: 534 KRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINA 593
Query: 301 LLRKLDISRSEKYLQIMKCKGFPVDANTTELLICIYSANKGD-NAFQELQ 349
++ ++ ++M G LI + ++ D AF LQ
Sbjct: 594 YAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQ 643
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 76/167 (45%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
S+GI P +V++ L+ K GR+ + L EM G+ P ++ L++ + + GL
Sbjct: 542 SQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSE 601
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A M G++P+++ NSLI + + EA V M G P VVTY +L+
Sbjct: 602 QAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLM 661
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAA 170
+V + + EM+ G KPD + L + + L A
Sbjct: 662 KALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSALRYMKQTLRA 708
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 108/279 (38%), Gaps = 7/279 (2%)
Query: 49 FSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMV 108
+SIL+ G+ + F++ +TYN+LIG + +E+A+ + M
Sbjct: 170 YSILIHALGR-----SEKLYEAFLLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMR 224
Query: 109 RRGCLPSVVTYNSLIHGWCKVKDVDRAIC--LLGEMVNEGLKPDVVTWTALVGGFCQVGK 166
+ G V Y+ +I + +D + L E+ + L+ DV ++ GF + G
Sbjct: 225 QDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGD 284
Query: 167 PLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNV 226
P A +L + G T I+ L EA +LF + +S I YN
Sbjct: 285 PSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNA 344
Query: 227 MLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENG 286
+L G D +T++++I G + A +L ME
Sbjct: 345 LLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGD 404
Query: 287 CPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVD 325
PN ++ + G + + ++ + L+ MK G D
Sbjct: 405 VQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPD 443
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 94/239 (39%), Gaps = 35/239 (14%)
Query: 98 EEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTAL 157
E+ + F L ++ P +TYN+LI + D+++A+ L+ +M +G + D V ++ +
Sbjct: 181 EKLYEAFLLSQKQTLTP--LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLV 238
Query: 158 VGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDI 217
+ + K +D + R L++ +E+ +
Sbjct: 239 IQSLTRSNK--------------------------IDSVMLLR-------LYKEIERDKL 265
Query: 218 DLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEE 277
+LD+ + N ++ G T T +I L G EAE
Sbjct: 266 ELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEA 325
Query: 278 LLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLICIY 336
L + ++G P +YN + G ++ + +E + M+ +G D +T LLI Y
Sbjct: 326 LFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAY 384
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 160/344 (46%), Gaps = 5/344 (1%)
Query: 7 IQPTIVSYNCLIQGLFKFGRWKEGAGLLYEM-MQKGVMPDVQTFSILVDGFGKEGLVSGA 65
I+ + +N LI GL K GR KE LL M +++ +P+ T++ L+DG+ + G + A
Sbjct: 366 IKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETA 425
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ V+ M ++PNVVT N+++GG C H + A+ F M + G +VVTY +LIH
Sbjct: 426 KEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHA 485
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
C V +V++A+ +M+ G PD + AL+ G CQV + A + +KE G +
Sbjct: 486 CCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLD 545
Query: 186 LQTCTVILDGLFKCRFHSEAM-SLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
L +++ GLF + ++E + + MEK D + YN ++
Sbjct: 546 LLAYNMLI-GLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMM 604
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRME-ENGCPPNRCSYNVFVHGLLR 303
T+ +I C G LDEA +L M + PN YN+ ++ +
Sbjct: 605 EQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSK 664
Query: 304 KLDISRSEKYLQIMKCKGFPVDANT-TELLICIYSANKGDNAFQ 346
+ ++ + MK K + T L C+ +G+ +
Sbjct: 665 LGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLK 708
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 157/359 (43%), Gaps = 15/359 (4%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
+S G+ P V I L K R +L ++M+ + F+ L+ G+ +
Sbjct: 251 SSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDI 310
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRG--------CLP 114
S ++ M V + P+VVT LI C +++EA++VF+ M RG
Sbjct: 311 SRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQM--RGKRTDDGNVIKA 368
Query: 115 SVVTYNSLIHGWCKVKDVDRAICLLGEM-VNEGLKPDVVTWTALVGGFCQVGKPLAAKEL 173
+ +N+LI G CKV + A LL M + E P+ VT+ L+ G+C+ GK AKE+
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEV 428
Query: 174 FFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSL--FRAMEKSDIDLDIVVYNVMLDGM 231
MKE PN+ T I+ G+ CR H M++ F MEK + ++V Y ++
Sbjct: 429 VSRMKEDEIKPNVVTVNTIVGGM--CRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHAC 486
Query: 232 CXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNR 291
C D + +I GLC +A ++ +++E G +
Sbjct: 487 CSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDL 546
Query: 292 CSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLICIYSANKGDNAFQELQQ 350
+YN+ + K + + + L M+ +G D+ T LI + +K + + + +
Sbjct: 547 LAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMME 605
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 144/343 (41%), Gaps = 36/343 (10%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCV 68
P V+YNCLI G + G+ + ++ M + + P+V T + +V G + ++ A
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
M GV+ NVVTY +LI C +E+AM ++ M+ GC P Y +LI G C+
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Query: 129 VK-----------------------------------DVDRAICLLGEMVNEGLKPDVVT 153
V+ + ++ +L +M EG KPD +T
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSIT 583
Query: 154 WTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAME 213
+ L+ F + + + + M+E G P + T ++D EA+ LF+ M
Sbjct: 584 YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMG 643
Query: 214 -KSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLL 272
S ++ + V+YN++++ + T+N + + L +
Sbjct: 644 LHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQG 703
Query: 273 DEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQ 315
+ +L+ M E C PN+ + + + L ++ + K++Q
Sbjct: 704 ETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQ 746
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEM-MQKGVMPDVQTFSILVDGFGKEGLVSG 64
G+ PT+ +Y +I G E L +M + V P+ ++IL++ F K G
Sbjct: 611 GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQ 670
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A + M V PNV TYN+L + Q E +K+ D MV + C P+ +T L+
Sbjct: 671 ALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILME 730
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 160/344 (46%), Gaps = 5/344 (1%)
Query: 7 IQPTIVSYNCLIQGLFKFGRWKEGAGLLYEM-MQKGVMPDVQTFSILVDGFGKEGLVSGA 65
I+ + +N LI GL K GR KE LL M +++ +P+ T++ L+DG+ + G + A
Sbjct: 366 IKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETA 425
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ V+ M ++PNVVT N+++GG C H + A+ F M + G +VVTY +LIH
Sbjct: 426 KEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHA 485
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
C V +V++A+ +M+ G PD + AL+ G CQV + A + +KE G +
Sbjct: 486 CCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLD 545
Query: 186 LQTCTVILDGLFKCRFHSEAM-SLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
L +++ GLF + ++E + + MEK D + YN ++
Sbjct: 546 LLAYNMLI-GLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMM 604
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRME-ENGCPPNRCSYNVFVHGLLR 303
T+ +I C G LDEA +L M + PN YN+ ++ +
Sbjct: 605 EQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSK 664
Query: 304 KLDISRSEKYLQIMKCKGFPVDANT-TELLICIYSANKGDNAFQ 346
+ ++ + MK K + T L C+ +G+ +
Sbjct: 665 LGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLK 708
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 157/359 (43%), Gaps = 15/359 (4%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
+S G+ P V I L K R +L ++M+ + F+ L+ G+ +
Sbjct: 251 SSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDI 310
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRG--------CLP 114
S ++ M V + P+VVT LI C +++EA++VF+ M RG
Sbjct: 311 SRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQM--RGKRTDDGNVIKA 368
Query: 115 SVVTYNSLIHGWCKVKDVDRAICLLGEM-VNEGLKPDVVTWTALVGGFCQVGKPLAAKEL 173
+ +N+LI G CKV + A LL M + E P+ VT+ L+ G+C+ GK AKE+
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEV 428
Query: 174 FFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSL--FRAMEKSDIDLDIVVYNVMLDGM 231
MKE PN+ T I+ G+ CR H M++ F MEK + ++V Y ++
Sbjct: 429 VSRMKEDEIKPNVVTVNTIVGGM--CRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHAC 486
Query: 232 CXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNR 291
C D + +I GLC +A ++ +++E G +
Sbjct: 487 CSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDL 546
Query: 292 CSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLICIYSANKGDNAFQELQQ 350
+YN+ + K + + + L M+ +G D+ T LI + +K + + + +
Sbjct: 547 LAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMME 605
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 132/310 (42%), Gaps = 4/310 (1%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCV 68
P V+YNCLI G + G+ + ++ M + + P+V T + +V G + ++ A
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
M GV+ NVVTY +LI C +E+AM ++ M+ GC P Y +LI G C+
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Query: 129 VKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQT 188
V+ AI ++ ++ G D++ + L+G FC E+ M++ G+ P+ T
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSIT 583
Query: 189 CTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXX-XXXXXXXXXXXXX 247
++ K + + M + +D + Y ++D C
Sbjct: 584 YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMG 643
Query: 248 XXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDI 307
+T +NI+I G +A L M+ PN +YN L K
Sbjct: 644 LHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEK--- 700
Query: 308 SRSEKYLQIM 317
++ E L++M
Sbjct: 701 TQGETLLKLM 710
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 159/344 (46%), Gaps = 5/344 (1%)
Query: 7 IQPTIVSYNCLIQGLFKFGRWKEGAGLLYEM-MQKGVMPDVQTFSILVDGFGKEGLVSGA 65
I+ + +N LI GL K GR KE LL M +++ P+ T++ L+DG+ + G + A
Sbjct: 366 IKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETA 425
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ V+ M ++PNVVT N+++GG C H + A+ F M + G +VVTY +LIH
Sbjct: 426 KEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHA 485
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
C V +V++A+ +M+ G PD + AL+ G CQV + A + +KE G +
Sbjct: 486 CCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLD 545
Query: 186 LQTCTVILDGLFKCRFHSEAM-SLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
L +++ GLF + ++E + + MEK D + YN ++
Sbjct: 546 LLAYNMLI-GLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMM 604
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRME-ENGCPPNRCSYNVFVHGLLR 303
T+ +I C G LDEA +L M + PN YN+ ++ +
Sbjct: 605 EQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSK 664
Query: 304 KLDISRSEKYLQIMKCKGFPVDANT-TELLICIYSANKGDNAFQ 346
+ ++ + MK K + T L C+ +G+ +
Sbjct: 665 LGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLK 708
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 157/359 (43%), Gaps = 15/359 (4%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
+S G+ P V I L K R +L ++M+ + F+ L+ G+ +
Sbjct: 251 SSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDI 310
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRG--------CLP 114
S ++ M V + P+VVT LI C +++EA++VF+ M RG
Sbjct: 311 SRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKM--RGKRTDDGNVIKA 368
Query: 115 SVVTYNSLIHGWCKVKDVDRAICLLGEM-VNEGLKPDVVTWTALVGGFCQVGKPLAAKEL 173
+ +N+LI G CKV + A LL M + E P+ VT+ L+ G+C+ GK AKE+
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEV 428
Query: 174 FFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSL--FRAMEKSDIDLDIVVYNVMLDGM 231
MKE PN+ T I+ G+ CR H M++ F MEK + ++V Y ++
Sbjct: 429 VSRMKEDEIKPNVVTVNTIVGGM--CRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHAC 486
Query: 232 CXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNR 291
C D + +I GLC +A ++ +++E G +
Sbjct: 487 CSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDL 546
Query: 292 CSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLICIYSANKGDNAFQELQQ 350
+YN+ + K + + + L M+ +G D+ T LI + +K + + + +
Sbjct: 547 LAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMME 605
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 147/351 (41%), Gaps = 36/351 (10%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
MK + P V+YNCLI G + G+ + ++ M + + P+V T + +V G +
Sbjct: 396 MKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHH 455
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
++ A M GV+ NVVTY +LI C +E+AM ++ M+ GC P Y
Sbjct: 456 GLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYY 515
Query: 121 SLIHGWCKVK-----------------------------------DVDRAICLLGEMVNE 145
+LI G C+V+ + ++ +L +M E
Sbjct: 516 ALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKE 575
Query: 146 GLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEA 205
G KPD +T+ L+ F + + + + M+E G P + T ++D EA
Sbjct: 576 GKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEA 635
Query: 206 MSLFRAME-KSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIR 264
+ LF+ M S ++ + V+YN++++ + T+N + +
Sbjct: 636 LKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFK 695
Query: 265 GLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQ 315
L + + +L+ M E C PN+ + + + L ++ + K++Q
Sbjct: 696 CLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQ 746
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 138/326 (42%), Gaps = 37/326 (11%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV--- 62
G+QP + +YN LI GL + + + ++ G +PDV T++ L+D +GK G +
Sbjct: 780 GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDEL 839
Query: 63 -------SGARCVMGFMVHVGV--------------------------EPNVVTYNSLIG 89
S C + H V P TY LI
Sbjct: 840 FELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLID 899
Query: 90 GYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKP 149
G ++ EA ++F+ M+ GC P+ YN LI+G+ K + D A L MV EG++P
Sbjct: 900 GLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRP 959
Query: 150 DVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLF 209
D+ T++ LV C VG+ F +KE G P++ +I++GL K EA+ LF
Sbjct: 960 DLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLF 1019
Query: 210 RAMEKSD-IDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCW 268
M+ S I D+ YN ++ + + +TFN +IRG
Sbjct: 1020 NEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSL 1079
Query: 269 EGLLDEAEELLMRMEENGCPPNRCSY 294
G + A + M G PN +Y
Sbjct: 1080 SGKPEHAYAVYQTMVTGGFSPNTGTY 1105
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 154/343 (44%), Gaps = 1/343 (0%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G +P++ +Y+ L+ GL K GLL EM G+ P+V TF+I + G+ G ++
Sbjct: 217 EGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINE 276
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A ++ M G P+VVTY LI C +++ A +VF+ M P VTY +L+
Sbjct: 277 AYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLD 336
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
+ +D+D EM +G PDVVT+T LV C+ G A + M++ G +P
Sbjct: 337 RFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILP 396
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
NL T ++ GL + +A+ LF ME + Y V +D
Sbjct: 397 NLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETF 456
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
+ N + L G EA+++ +++ G P+ +YN+ + +
Sbjct: 457 EKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKV 516
Query: 305 LDISRSEKYLQIMKCKGFPVDANTTELLI-CIYSANKGDNAFQ 346
+I + K L M G D LI +Y A++ D A++
Sbjct: 517 GEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWK 559
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 140/298 (46%)
Query: 36 EMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRH 95
EM + G +PDV TF+ILVD K G A + M G+ PN+ TYN+LI G H
Sbjct: 353 EMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVH 412
Query: 96 QMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWT 155
++++A+++F M G P+ TY I + K D A+ +M +G+ P++V
Sbjct: 413 RLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACN 472
Query: 156 ALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKS 215
A + + G+ AK++F+ +K+ G VP+ T +++ K EA+ L M ++
Sbjct: 473 ASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMEN 532
Query: 216 DIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEA 275
+ D++V N +++ + T+N ++ GL G + EA
Sbjct: 533 GCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEA 592
Query: 276 EELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLI 333
EL M + GCPPN ++N L + +++ + K L M G D T +I
Sbjct: 593 IELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTII 650
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 123/271 (45%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+GI P + +YN LI GL + R + L M GV P T+ + +D +GK G
Sbjct: 392 QGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVS 451
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A M G+ PN+V N+ + + EA ++F + G +P VTYN ++
Sbjct: 452 ALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMK 511
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
+ KV ++D AI LL EM+ G +PDV+ +L+ + + A ++F MKE P
Sbjct: 512 CYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKP 571
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
+ T +L GL K EA+ LF M + + + +N + D +C
Sbjct: 572 TVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKML 631
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEA 275
D +T+N +I GL G + EA
Sbjct: 632 FKMMDMGCVPDVFTYNTIIFGLVKNGQVKEA 662
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 111/211 (52%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
+KGI P IV+ N + L K GR +E + Y + G++PD T+++++ + K G +
Sbjct: 461 TKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEID 520
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A ++ M+ G EP+V+ NSLI +++EA K+F M P+VVTYN+L+
Sbjct: 521 EAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLL 580
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
G K + AI L MV +G P+ +T+ L C+ + A ++ F M + G V
Sbjct: 581 AGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCV 640
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEK 214
P++ T I+ GL K EAM F M+K
Sbjct: 641 PDVFTYNTIIFGLVKNGQVKEAMCFFHQMKK 671
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 140/343 (40%), Gaps = 37/343 (10%)
Query: 15 NCLIQGLFKFGRWKEGAGLLYEMMQKGVMP-DVQTFSILVDGFGKEGLVSGARCVMGFMV 73
N +++ L G+ +E A ++++MQK ++ D T+ + +G + A + M
Sbjct: 122 NYMLEALRVDGKLEEMA-YVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMR 180
Query: 74 HVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVD 133
G N +YN LI EAM+V+ M+ G PS+ TY+SL+ G K +D+D
Sbjct: 181 EFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDID 240
Query: 134 RAICLLGEMVNEGLKP-----------------------------------DVVTWTALV 158
+ LL EM GLKP DVVT+T L+
Sbjct: 241 SVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLI 300
Query: 159 GGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDID 218
C K AKE+F MK P+ T +LD R + MEK
Sbjct: 301 DALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHV 360
Query: 219 LDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEEL 278
D+V + +++D +C + +T+N +I GL LD+A EL
Sbjct: 361 PDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEL 420
Query: 279 LMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKG 321
ME G P +Y VF+ + D + + + MK KG
Sbjct: 421 FGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKG 463
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 157/353 (44%), Gaps = 12/353 (3%)
Query: 2 KNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQK--GVMPDVQTFSILVDGFGKE 59
++ I I+ Y+C + GA L+E K GV P + T+++L+ G +
Sbjct: 746 RDGDSILVPIIRYSCKHNNV-------SGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEA 798
Query: 60 GLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTY 119
++ A+ V + G P+V TYN L+ Y +++E +++ M C + +T+
Sbjct: 799 DMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITH 858
Query: 120 NSLIHGWCKVKDVDRAICLLGE-MVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMK 178
N +I G K +VD A+ L + M + P T+ L+ G + G+ AK+LF M
Sbjct: 859 NIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGML 918
Query: 179 EHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXX 238
++G PN ++++G K A +LF+ M K + D+ Y+V++D +C
Sbjct: 919 DYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVD 978
Query: 239 XXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEEN-GCPPNRCSYNVF 297
D +N++I GL L+EA L M+ + G P+ +YN
Sbjct: 979 EGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSL 1038
Query: 298 VHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLICIYS-ANKGDNAFQELQ 349
+ L + + K ++ G + T LI YS + K ++A+ Q
Sbjct: 1039 ILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQ 1091
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 137/325 (42%)
Query: 13 SYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFM 72
SYN LI L K E + M+ +G P +QT+S L+ G GK + ++ M
Sbjct: 190 SYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM 249
Query: 73 VHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDV 132
+G++PNV T+ I ++ EA ++ M GC P VVTY LI C + +
Sbjct: 250 ETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKL 309
Query: 133 DRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVI 192
D A + +M KPD VT+ L+ F + K+ + M++ G VP++ T T++
Sbjct: 310 DCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTIL 369
Query: 193 LDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXX 252
+D L K EA M I ++ YN ++ G+
Sbjct: 370 VDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGV 429
Query: 253 XFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEK 312
YT+ + I G A E +M+ G PN + N ++ L + +++
Sbjct: 430 KPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQ 489
Query: 313 YLQIMKCKGFPVDANTTELLICIYS 337
+K G D+ T +++ YS
Sbjct: 490 IFYGLKDIGLVPDSVTYNMMMKCYS 514
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 104/211 (49%), Gaps = 1/211 (0%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
+ + PT +Y LI GL K GR E L M+ G P+ ++IL++GFGK G
Sbjct: 883 SDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEA 942
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
A + MV GV P++ TY+ L+ C+ +++E + F + G P VV YN +
Sbjct: 943 DAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLI 1002
Query: 123 IHGWCKVKDVDRAICLLGEM-VNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHG 181
I+G K ++ A+ L EM + G+ PD+ T+ +L+ G A +++ ++ G
Sbjct: 1003 INGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAG 1062
Query: 182 QVPNLQTCTVILDGLFKCRFHSEAMSLFRAM 212
PN+ T ++ G A ++++ M
Sbjct: 1063 LEPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1093
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 82/154 (53%), Gaps = 1/154 (0%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G++P + +Y+ L+ L GR EG E+ + G+ PDV ++++++G GK +
Sbjct: 955 EGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEE 1014
Query: 65 ARCVMGFM-VHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A + M G+ P++ TYNSLI + +EEA K+++ + R G P+V T+N+LI
Sbjct: 1015 ALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALI 1074
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTAL 157
G+ + A + MV G P+ T+ L
Sbjct: 1075 RGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 129/341 (37%), Gaps = 48/341 (14%)
Query: 5 KGIQPTIVSYNCLIQGL-------FKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFG 57
K +P + S + +GL F +K AG L ++ +T + +++
Sbjct: 76 KSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNL------NLVHTTETCNYMLEALR 129
Query: 58 KEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVV 117
+G + V M ++ + TY ++ ++ +++A M G + +
Sbjct: 130 VDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAY 189
Query: 118 TYNSLIH-----------------------------------GWCKVKDVDRAICLLGEM 142
+YN LIH G K +D+D + LL EM
Sbjct: 190 SYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM 249
Query: 143 VNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFH 202
GLKP+V T+T + + GK A E+ M + G P++ T TV++D L R
Sbjct: 250 ETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKL 309
Query: 203 SEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIM 262
A +F M+ D V Y +LD D TF I+
Sbjct: 310 DCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTIL 369
Query: 263 IRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLR 303
+ LC G EA + L M + G PN +YN + GLLR
Sbjct: 370 VDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLR 410
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 44/87 (50%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
MK S+GI P + +YN LI L G +E + E+ + G+ P+V TF+ L+ G+ G
Sbjct: 1022 MKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSG 1081
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSL 87
A V MV G PN TY L
Sbjct: 1082 KPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 149/339 (43%), Gaps = 3/339 (0%)
Query: 6 GIQPTIVSYNCLIQGLFKFGR-WKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
G PT+V+YN ++ K GR W++ G+L EM KG+ D T S ++ +EGL+
Sbjct: 240 GPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLRE 299
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A+ + G EP VTYN+L+ + EA+ V M C VTYN L+
Sbjct: 300 AKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVA 359
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
+ + A ++ M +G+ P+ +T+T ++ + + GK A +LF++MKE G VP
Sbjct: 360 AYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVP 419
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
N T +L L K +E + + M+ + + +N ML
Sbjct: 420 NTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVF 479
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
D TFN +I G +A ++ M G +YN ++ L RK
Sbjct: 480 REMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARK 539
Query: 305 LDISRSEKYLQIMKCKGFPVDANTTELLICIYSANKGDN 343
D E + MK KGF + L++ Y+ KG N
Sbjct: 540 GDWRSGENVISDMKSKGFKPTETSYSLMLQCYA--KGGN 576
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 138/321 (42%), Gaps = 10/321 (3%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G P +YN ++ L K R E +L +M G P+ T++ ++ G +G+
Sbjct: 416 GCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFV 475
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
V M G EP+ T+N+LI Y +A K++ M R G V TYN+L++
Sbjct: 476 NRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNA 535
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+ D ++ +M ++G KP +++ ++ + + G L + + +KE P+
Sbjct: 536 LARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPS 595
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+L FKCR + + F +K D+V++N ML
Sbjct: 596 WMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILE 655
Query: 246 XXXXXXXXFDTYTFNIMI-----RGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHG 300
D T+N ++ RG CW+ AEE+L +E++ P+ SYN + G
Sbjct: 656 SIREDGLSPDLVTYNSLMDMYVRRGECWK-----AEEILKTLEKSQLKPDLVSYNTVIKG 710
Query: 301 LLRKLDISRSEKYLQIMKCKG 321
R+ + + + L M +G
Sbjct: 711 FCRRGLMQEAVRMLSEMTERG 731
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/313 (20%), Positives = 128/313 (40%), Gaps = 35/313 (11%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G + +YN L+ L + G W+ G ++ +M KG P ++S+++ + K G G
Sbjct: 521 GFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGI 580
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ + + P+ + +L+ + + + F L + G P +V +NS++
Sbjct: 581 ERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSI 640
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+ + D+A +L + +GL PD+VT+ +L+ + + G+ A+E
Sbjct: 641 FTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEE------------- 687
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+ + +EKS + D+V YN ++ G C
Sbjct: 688 ----------------------ILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLS 725
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
+T+N + G G+ E E+++ M +N C PN ++ + V G R
Sbjct: 726 EMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAG 785
Query: 306 DISRSEKYLQIMK 318
S + ++ +K
Sbjct: 786 KYSEAMDFVSKIK 798
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 112/248 (45%), Gaps = 35/248 (14%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFG----------RWKEGAGLLYEMM--------------- 38
SKG +PT SY+ ++Q K G R KEG M+
Sbjct: 554 SKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALA 613
Query: 39 ----------QKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLI 88
+ G PD+ F+ ++ F + + A ++ + G+ P++VTYNSL+
Sbjct: 614 GSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLM 673
Query: 89 GGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLK 148
Y R + +A ++ + + P +V+YN++I G+C+ + A+ +L EM G++
Sbjct: 674 DMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIR 733
Query: 149 PDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSL 208
P + T+ V G+ +G +++ M ++ PN T +++DG + +SEAM
Sbjct: 734 PCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDF 793
Query: 209 FRAMEKSD 216
++ D
Sbjct: 794 VSKIKTFD 801
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 137/334 (41%), Gaps = 45/334 (13%)
Query: 17 LIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVG 76
++ L + ++ A LL ++ + + DV+ ++ ++ + + G A + M +G
Sbjct: 181 FVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMG 240
Query: 77 VEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAI 136
P +VTYN + + VF M R W K+ +
Sbjct: 241 PSPTLVTYNVI-------------LDVFGKMGR---------------SWRKI------L 266
Query: 137 CLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGL 196
+L EM ++GLK D T + ++ + G AKE F +K G P T +L
Sbjct: 267 GVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVF 326
Query: 197 FKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDT 256
K ++EA+S+ + ME++ D V YN ++ +
Sbjct: 327 GKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNA 386
Query: 257 YTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQI 316
T+ +I G DEA +L M+E GC PN C+YN + L +K SRS + +++
Sbjct: 387 ITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKK---SRSNEMIKM 443
Query: 317 ---MKCKGFPVDANT--TELLICIYSANKGDNAF 345
MK G + T T L +C NKG + F
Sbjct: 444 LCDMKSNGCSPNRATWNTMLALC---GNKGMDKF 474
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 80/199 (40%), Gaps = 2/199 (1%)
Query: 150 DVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKC-RFHSEAMSL 208
DV +T ++ + + GK A +LF MKE G P L T VILD K R + + +
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGV 268
Query: 209 FRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCW 268
M + D + +L T T+N +++
Sbjct: 269 LDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGK 328
Query: 269 EGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANT 328
G+ EA +L MEEN CP + +YN V +R + +++M KG +A T
Sbjct: 329 AGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAIT 388
Query: 329 TELLICIY-SANKGDNAFQ 346
+I Y A K D A +
Sbjct: 389 YTTVIDAYGKAGKEDEALK 407
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 143/299 (47%), Gaps = 35/299 (11%)
Query: 12 VSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGF 71
+SYN +I G FK G EM G+ P+V T++ L++G K + A +
Sbjct: 585 MSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDE 644
Query: 72 MVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKD 131
M + GV+ ++ Y +LI G+C R ME A +F ++ G PS YNSLI G+ + +
Sbjct: 645 MKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGN 704
Query: 132 VDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTV 191
+ A+ L +M+ +GL+ D+ T+T L+ G + G + A EL+ M+ G VP+ TV
Sbjct: 705 MVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTV 764
Query: 192 ILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXX 251
I++GL K + + +F M+K+++ ++++YN
Sbjct: 765 IVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNA------------------------- 799
Query: 252 XXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRS 310
+I G EG LDEA L M + G P+ ++++ V G + L R+
Sbjct: 800 ----------VIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVGNLQPVRA 848
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 154/334 (46%), Gaps = 7/334 (2%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KG++P +Y+ LI G F+ + ++ M + + + +++G K G S
Sbjct: 507 KGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSK 566
Query: 65 ARCVMGFMVHVGVEPNV----VTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
AR ++ M+ E + ++YNS+I G+ +M+ A+ ++ M G P+V+TY
Sbjct: 567 ARELLANMIE---EKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYT 623
Query: 121 SLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEH 180
SL++G CK +D+A+ + EM N+G+K D+ + AL+ GFC+ +A LF + E
Sbjct: 624 SLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEE 683
Query: 181 GQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXX 240
G P+ ++ G A+ L++ M K + D+ Y ++DG+
Sbjct: 684 GLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILA 743
Query: 241 XXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHG 300
D + +++ GL +G + ++ M++N PN YN + G
Sbjct: 744 SELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAG 803
Query: 301 LLRKLDISRSEKYLQIMKCKGFPVDANTTELLIC 334
R+ ++ + + M KG D T ++L+
Sbjct: 804 HYREGNLDEAFRLHDEMLDKGILPDGATFDILVS 837
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 138/297 (46%), Gaps = 2/297 (0%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+ P++ + +IQG K + +E L E + G + +V + ++ K+G A
Sbjct: 404 GLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETG-LANVFVCNTILSWLCKQGKTDEA 462
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ M G+ PNVV+YN+++ G+C + M+ A VF ++ +G P+ TY+ LI G
Sbjct: 463 TELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDG 522
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV-P 184
+ D A+ ++ M + ++ + V + ++ G C+VG+ A+EL M E ++
Sbjct: 523 CFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCV 582
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
+ + I+DG FK A++ + M + I +++ Y +++G+C
Sbjct: 583 SCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMR 642
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGL 301
D + +I G C ++ A L + E G P++ YN + G
Sbjct: 643 DEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGF 699
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 150/360 (41%), Gaps = 35/360 (9%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
MK K P+ +Y +I K G + L EM+ G+ +V + L+ G K
Sbjct: 294 MKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNN 353
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
+ A + M G PN VT++ LI + +ME+A++ + M G PSV +
Sbjct: 354 DLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVH 413
Query: 121 SLIHGW----------------------------------CKVKDVDRAICLLGEMVNEG 146
++I GW CK D A LL +M + G
Sbjct: 414 TIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRG 473
Query: 147 LKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAM 206
+ P+VV++ ++ G C+ A+ +F + E G PN T ++++DG F+ A+
Sbjct: 474 IGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNAL 533
Query: 207 SLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXX-FDTYTFNIMIRG 265
+ M S+I+++ VVY +++G+C ++N +I G
Sbjct: 534 EVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDG 593
Query: 266 LCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVD 325
EG +D A M NG PN +Y ++GL + + ++ + MK KG +D
Sbjct: 594 FFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLD 653
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 109/225 (48%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
GI P +++Y L+ GL K R + + EM KGV D+ + L+DGF K + A
Sbjct: 614 GISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESA 673
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ ++ G+ P+ YNSLI G+ M A+ ++ M++ G + TY +LI G
Sbjct: 674 SALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDG 733
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
K ++ A L EM GL PD + +T +V G + G+ + ++F MK++ PN
Sbjct: 734 LLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPN 793
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDG 230
+ ++ G ++ EA L M I D +++++ G
Sbjct: 794 VLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 142/329 (43%), Gaps = 37/329 (11%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+ V+ L++ + + E +L +++G PD +S+ V K ++ A
Sbjct: 228 GVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMA 287
Query: 66 RCVMGFMVHVGV-EPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
++ M + P+ TY S+I + M++A+++ D M+ G +VV SLI
Sbjct: 288 NSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLIT 347
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G CK D+ A+ L +M EG P+ VT++ L+ F + G+ A E + M+ G P
Sbjct: 348 GHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTP 407
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
++ I+ G K + H EA+ LF D + + NV
Sbjct: 408 SVFHVHTIIQGWLKGQKHEEALKLF------DESFETGLANV------------------ 443
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
+ N ++ LC +G DEA ELL +ME G PN SYN + G R+
Sbjct: 444 ------------FVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQ 491
Query: 305 LDISRSEKYLQIMKCKGFPVDANTTELLI 333
++ + + KG + T +LI
Sbjct: 492 KNMDLARIVFSNILEKGLKPNNYTYSILI 520
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 92/171 (53%), Gaps = 4/171 (2%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G+ P+ YN LI G G L +M++ G+ D+ T++ L+DG K+G +
Sbjct: 683 EGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLIL 742
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A + M VG+ P+ + Y ++ G + Q + +K+F+ M + P+V+ YN++I
Sbjct: 743 ASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIA 802
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVG--KPLAAKEL 173
G + ++D A L EM+++G+ PD T+ LV G QVG +P+ A L
Sbjct: 803 GHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG--QVGNLQPVRAASL 851
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 156/340 (45%), Gaps = 10/340 (2%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G++ TI SYN L + + + GR+ +M+ +GV P T+++++ GF + A
Sbjct: 215 GVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETA 274
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
M G+ P+ T+N++I G+C +M+EA K+F M PSVV+Y ++I G
Sbjct: 275 LRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKG 334
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+ V VD + + EM + G++P+ T++ L+ G C GK + AK + M P
Sbjct: 335 YLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPK 394
Query: 186 LQTCTV-ILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
+ + +L K + A + +AM ++ + Y V+++ C
Sbjct: 395 DNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLL 454
Query: 245 XX--------XXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNV 296
+ +N +I LC G +AE L ++ + G ++ + N
Sbjct: 455 DTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGV-QDQDALNN 513
Query: 297 FVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLICIY 336
+ G ++ + S + L+IM +G P ++N ELLI Y
Sbjct: 514 LIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSY 553
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 108/216 (50%)
Query: 17 LIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVG 76
+I+ L + + +L +M +KGV D F +L++ +GK G+V + + M +G
Sbjct: 156 MIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLG 215
Query: 77 VEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAI 136
VE + +YNSL R + A + F+ MV G P+ TYN ++ G+ ++ A+
Sbjct: 216 VERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETAL 275
Query: 137 CLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGL 196
+M G+ PD T+ ++ GFC+ K A++LF MK + P++ + T ++ G
Sbjct: 276 RFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGY 335
Query: 197 FKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMC 232
+ + +F M S I+ + Y+ +L G+C
Sbjct: 336 LAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLC 371
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 138/330 (41%), Gaps = 22/330 (6%)
Query: 14 YNCL-----IQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCV 68
YN L ++ +F RW E +GL+ D T ++ G+ ++ ARC+
Sbjct: 121 YNVLHGAKKLEHALQFFRWTERSGLIRH--------DRDTHMKMIKMLGEVSKLNHARCI 172
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
+ M GV + + LI Y ++E++K+F M G ++ +YNSL +
Sbjct: 173 LLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILR 232
Query: 129 VKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQT 188
A +MV+EG++P T+ ++ GF + A F MK G P+ T
Sbjct: 233 RGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDAT 292
Query: 189 CTVILDGLFKCRFH--SEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXX 246
+++G CRF EA LF M+ + I +V Y M+ G
Sbjct: 293 FNTMINGF--CRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEE 350
Query: 247 XXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL- 305
+ T++ ++ GLC G + EA+ +L M P S +F+ L+ +
Sbjct: 351 MRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNS--IFLKLLVSQSK 408
Query: 306 --DISRSEKYLQIMKCKGFPVDANTTELLI 333
D++ + + L+ M P +A +LI
Sbjct: 409 AGDMAAATEVLKAMATLNVPAEAGHYGVLI 438
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 101/253 (39%), Gaps = 5/253 (1%)
Query: 82 VTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLP-SVVTYNSLIHGWCKVKDVDRAICLLG 140
+ YN L G L H A++ F R G + T+ +I +V ++ A C+L
Sbjct: 119 LVYNVLHGAKKLEH----ALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILL 174
Query: 141 EMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCR 200
+M +G+ D + L+ + + G + ++F MK+ G +++ + + +
Sbjct: 175 DMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRG 234
Query: 201 FHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFN 260
+ A F M ++ YN+ML G D TFN
Sbjct: 235 RYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFN 294
Query: 261 IMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCK 320
MI G C +DEAE+L + M+ N P+ SY + G L + + + M+
Sbjct: 295 TMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSS 354
Query: 321 GFPVDANTTELLI 333
G +A T L+
Sbjct: 355 GIEPNATTYSTLL 367
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 139/292 (47%), Gaps = 1/292 (0%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGL-V 62
S+G+ ++ SY LI + GR++ LL M + + P + T++ +++ + GL
Sbjct: 169 SQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDW 228
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
G + M H G++P++VTYN+L+ +R +EA VF M G +P + TY+ L
Sbjct: 229 EGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHL 288
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
+ + K++ +++ LLGEM + G PD+ ++ L+ + + G A +F M+ G
Sbjct: 289 VETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGC 348
Query: 183 VPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXX 242
PN T +V+L+ + + + LF M+ S+ D D YN++++
Sbjct: 349 TPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVT 408
Query: 243 XXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSY 294
D T+ +I GL ++A ++L M N P+ +Y
Sbjct: 409 LFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAY 460
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 147/334 (44%), Gaps = 2/334 (0%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+GIQP IV+YN L+ G E + M G++PD+ T+S LV+ FGK +
Sbjct: 241 EGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEK 300
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
++G M G P++ +YN L+ Y ++EAM VF M GC P+ TY+ L++
Sbjct: 301 VCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLN 360
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
+ + D L EM + PD T+ L+ F + G LF M E P
Sbjct: 361 LFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEP 420
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
+++T I+ K H +A + + M +DI Y +++
Sbjct: 421 DMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAF 480
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
TF+ ++ GL+ E+E +L R+ ++G P NR ++N + +
Sbjct: 481 NTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQG 540
Query: 305 LDISRSEK-YLQIMKCKGFPVDANTTELLICIYS 337
+ K Y+ + K + P D T E ++ +YS
Sbjct: 541 GKFEEAVKTYVDMEKSRCDP-DERTLEAVLSVYS 573
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 128/278 (46%), Gaps = 4/278 (1%)
Query: 25 GRWKEGAGLLYEMMQKGV--MPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVV 82
G W+ L++ MQ+ + P+ ++I++ G+EGL+ V M GV +V
Sbjct: 119 GDWQRSL-RLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVF 177
Query: 83 TYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVK-DVDRAICLLGE 141
+Y +LI Y + E ++++ D M PS++TYN++I+ + D + + L E
Sbjct: 178 SYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAE 237
Query: 142 MVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRF 201
M +EG++PD+VT+ L+ G A+ +F TM + G VP+L T + +++ K R
Sbjct: 238 MRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRR 297
Query: 202 HSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNI 261
+ L M DI YNV+L+ + T+++
Sbjct: 298 LEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSV 357
Query: 262 MIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVH 299
++ G D+ +L + M+ + P+ +YN+ +
Sbjct: 358 LLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIE 395
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 110/225 (48%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
S P +YN LI+ + G +KE L ++M+++ + PD++T+ ++ GK GL
Sbjct: 380 SSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHE 439
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
AR ++ +M + P+ Y +I + EEA+ F+ M G PS+ T++SL+
Sbjct: 440 DARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLL 499
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
+ + + V + +L +V+ G+ + T+ A + + Q GK A + + M++
Sbjct: 500 YSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCD 559
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVML 228
P+ +T +L R E F M+ SDI I+ Y +ML
Sbjct: 560 PDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMML 604
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 135/305 (44%), Gaps = 1/305 (0%)
Query: 29 EGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLI 88
E M++ G+ P V L+ + V+ A+ G G+ P+ TY+ L+
Sbjct: 156 EACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILV 215
Query: 89 GGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLK 148
G+ A KVFD M+ R C+ ++ YN+L+ CK DVD + EM N GLK
Sbjct: 216 RGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLK 275
Query: 149 PDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSL 208
PD ++ + +C G +A ++ MK + VPN+ T I+ L K +A L
Sbjct: 276 PDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLL 335
Query: 209 FRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCW 268
M + + D YN ++ C D +T+N++++ L
Sbjct: 336 LDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIR 395
Query: 269 EGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL-DISRSEKYLQIMKCKGFPVDAN 327
G D A E+ M E P +Y V +HGL+RK + + +Y ++M +G P +
Sbjct: 396 IGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYST 455
Query: 328 TTELL 332
T E+L
Sbjct: 456 TVEML 460
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 112/229 (48%), Gaps = 6/229 (2%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAG---LLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
GI P+ +Y+ L++G + R ++ +G + EM+++ + D+ ++ L+D K G V
Sbjct: 203 GIVPSAKTYSILVRG---WARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDV 259
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
G + M ++G++P+ ++ I YC + A KV D M R +P+V T+N +
Sbjct: 260 DGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHI 319
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
I CK + VD A LL EM+ +G PD T+ +++ C + A +L M
Sbjct: 320 IKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKC 379
Query: 183 VPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGM 231
+P+ T ++L L + A ++ M + + Y VM+ G+
Sbjct: 380 LPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGL 428
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 94/188 (50%)
Query: 11 IVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMG 70
+++YN L+ L K G G + EM G+ PD +F+I + + G V A V+
Sbjct: 243 LLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLD 302
Query: 71 FMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVK 130
M + PNV T+N +I C ++++A + D M+++G P TYNS++ C
Sbjct: 303 RMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHC 362
Query: 131 DVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCT 190
+V+RA LL M PD T+ ++ ++G+ A E++ M E P + T T
Sbjct: 363 EVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYT 422
Query: 191 VILDGLFK 198
V++ GL +
Sbjct: 423 VMIHGLVR 430
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 80/188 (42%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G++P S+ I G +L M + ++P+V TF+ ++ K V A
Sbjct: 273 GLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDA 332
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ M+ G P+ TYNS++ +C ++ A K+ M R CLP TYN ++
Sbjct: 333 YLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKL 392
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
++ DRA + M P V T+T ++ G + L +F M +P
Sbjct: 393 LIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPP 452
Query: 186 LQTCTVIL 193
T +L
Sbjct: 453 YSTTVEML 460
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 136/286 (47%), Gaps = 3/286 (1%)
Query: 25 GRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTY 84
G + +G LL M G+ PD+ F++ +D K G + A V+ + G+ + V+
Sbjct: 285 GYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSV 344
Query: 85 NSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVN 144
+S+I G+C + EEA+K+ R P++ Y+S + C D+ RA + E+
Sbjct: 345 SSVIDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFE 401
Query: 145 EGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSE 204
GL PD V +T ++ G+C +G+ A + F + + G P+L T T+++ + S+
Sbjct: 402 LGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISD 461
Query: 205 AMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIR 264
A S+FR M+ + LD+V YN ++ G D T+NI+I
Sbjct: 462 AESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIH 521
Query: 265 GLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRS 310
+ G +DEA E++ + G P+ ++ + G ++ D +
Sbjct: 522 SMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEA 567
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 115/227 (50%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+ P V Y +I G GR + +++ G P + T +IL+ + G +S A
Sbjct: 403 GLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDA 462
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
V M G++ +VVTYN+L+ GY HQ+ + ++ D M G P V TYN LIH
Sbjct: 463 ESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHS 522
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+D A ++ E++ G P + +T ++GGF + G A L+F M + P+
Sbjct: 523 MVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPD 582
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMC 232
+ TC+ +L G K + +A+ LF + + + D+V+YN ++ G C
Sbjct: 583 VVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYC 629
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 110/199 (55%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
++G++ +V+YN L+ G K + + L+ EM G+ PDV T++IL+ G +
Sbjct: 470 KTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYI 529
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
A ++ ++ G P+ + + +IGG+ R +EA ++ M P VVT ++L
Sbjct: 530 DEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSAL 589
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
+HG+CK + +++AI L ++++ GLKPDVV + L+ G+C VG A EL M + G
Sbjct: 590 LHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGM 649
Query: 183 VPNLQTCTVILDGLFKCRF 201
+PN T ++ GL RF
Sbjct: 650 LPNESTHHALVLGLEGKRF 668
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 131/299 (43%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
+S ++P I Y+ + + G + + E+ + G++PD ++ ++DG+ G
Sbjct: 365 HSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRT 424
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
A G ++ G P++ T LIG + +A VF M G VVTYN+L
Sbjct: 425 DKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNL 484
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
+HG+ K +++ L+ EM + G+ PDV T+ L+ G A E+ + G
Sbjct: 485 MHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGF 544
Query: 183 VPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXX 242
VP+ T ++ G K EA L+ M + D+V + +L G C
Sbjct: 545 VPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIV 604
Query: 243 XXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGL 301
D +N +I G C G +++A EL+ M + G PN +++ V GL
Sbjct: 605 LFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 122/300 (40%), Gaps = 3/300 (1%)
Query: 49 FSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMV 108
FSIL+D +E V+ A + + G+ P+ SL+ H +E A + + M+
Sbjct: 204 FSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHML 263
Query: 109 RRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPL 168
RG + + I +C D+ LL M + G++PD+V +T + C+ G
Sbjct: 264 SRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLK 323
Query: 169 AAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVML 228
A + F +K G + + + ++DG K EA+ L + + +I VY+ L
Sbjct: 324 EATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVYSSFL 380
Query: 229 DGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCP 288
+C D + MI G C G D+A + + ++G P
Sbjct: 381 SNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNP 440
Query: 289 PNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLICIYSANKGDNAFQEL 348
P+ + + + R IS +E + MK +G +D T L+ Y N EL
Sbjct: 441 PSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFEL 500
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 136/286 (47%), Gaps = 3/286 (1%)
Query: 25 GRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTY 84
G + +G LL M G+ PD+ F++ +D K G + A V+ + G+ + V+
Sbjct: 285 GYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSV 344
Query: 85 NSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVN 144
+S+I G+C + EEA+K+ R P++ Y+S + C D+ RA + E+
Sbjct: 345 SSVIDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFE 401
Query: 145 EGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSE 204
GL PD V +T ++ G+C +G+ A + F + + G P+L T T+++ + S+
Sbjct: 402 LGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISD 461
Query: 205 AMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIR 264
A S+FR M+ + LD+V YN ++ G D T+NI+I
Sbjct: 462 AESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIH 521
Query: 265 GLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRS 310
+ G +DEA E++ + G P+ ++ + G ++ D +
Sbjct: 522 SMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEA 567
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 115/227 (50%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+ P V Y +I G GR + +++ G P + T +IL+ + G +S A
Sbjct: 403 GLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDA 462
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
V M G++ +VVTYN+L+ GY HQ+ + ++ D M G P V TYN LIH
Sbjct: 463 ESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHS 522
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+D A ++ E++ G P + +T ++GGF + G A L+F M + P+
Sbjct: 523 MVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPD 582
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMC 232
+ TC+ +L G K + +A+ LF + + + D+V+YN ++ G C
Sbjct: 583 VVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYC 629
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 110/199 (55%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
++G++ +V+YN L+ G K + + L+ EM G+ PDV T++IL+ G +
Sbjct: 470 KTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYI 529
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
A ++ ++ G P+ + + +IGG+ R +EA ++ M P VVT ++L
Sbjct: 530 DEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSAL 589
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
+HG+CK + +++AI L ++++ GLKPDVV + L+ G+C VG A EL M + G
Sbjct: 590 LHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGM 649
Query: 183 VPNLQTCTVILDGLFKCRF 201
+PN T ++ GL RF
Sbjct: 650 LPNESTHHALVLGLEGKRF 668
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 131/299 (43%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
+S ++P I Y+ + + G + + E+ + G++PD ++ ++DG+ G
Sbjct: 365 HSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRT 424
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
A G ++ G P++ T LIG + +A VF M G VVTYN+L
Sbjct: 425 DKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNL 484
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
+HG+ K +++ L+ EM + G+ PDV T+ L+ G A E+ + G
Sbjct: 485 MHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGF 544
Query: 183 VPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXX 242
VP+ T ++ G K EA L+ M + D+V + +L G C
Sbjct: 545 VPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIV 604
Query: 243 XXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGL 301
D +N +I G C G +++A EL+ M + G PN +++ V GL
Sbjct: 605 LFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 122/300 (40%), Gaps = 3/300 (1%)
Query: 49 FSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMV 108
FSIL+D +E V+ A + + G+ P+ SL+ H +E A + + M+
Sbjct: 204 FSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHML 263
Query: 109 RRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPL 168
RG + + I +C D+ LL M + G++PD+V +T + C+ G
Sbjct: 264 SRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLK 323
Query: 169 AAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVML 228
A + F +K G + + + ++DG K EA+ L + + +I VY+ L
Sbjct: 324 EATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVYSSFL 380
Query: 229 DGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCP 288
+C D + MI G C G D+A + + ++G P
Sbjct: 381 SNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNP 440
Query: 289 PNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLICIYSANKGDNAFQEL 348
P+ + + + R IS +E + MK +G +D T L+ Y N EL
Sbjct: 441 PSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFEL 500
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 135/294 (45%)
Query: 8 QPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARC 67
+P + YN ++ G K G + M ++ PDV TF+IL++G+ + A
Sbjct: 190 KPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALD 249
Query: 68 VMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWC 127
+ M G EPNVV++N+LI G+ ++EE +K+ M+ GC S T L+ G C
Sbjct: 250 LFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLC 309
Query: 128 KVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQ 187
+ VD A L+ +++N+ + P + +LV C K + A E+ + + GQ P
Sbjct: 310 REGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFI 369
Query: 188 TCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXX 247
CT +++GL K +A M + I D V +N++L +C
Sbjct: 370 ACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLA 429
Query: 248 XXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGL 301
D T+++++ G EG E E L+ M + P+ +YN + GL
Sbjct: 430 SSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGL 483
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 110/227 (48%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KG +P +VS+N LI+G G+ +EG + YEM++ G T ILVDG +EG V
Sbjct: 257 KGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDD 316
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A ++ +++ V P+ Y SL+ C ++ AM++ + + ++G P + +L+
Sbjct: 317 ACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVE 376
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G K ++A + +M+N G+ PD VT+ L+ C A L G P
Sbjct: 377 GLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEP 436
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGM 231
+ T V++ G K E L M D+ DI YN ++DG+
Sbjct: 437 DETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGL 483
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 112/268 (41%), Gaps = 4/268 (1%)
Query: 67 CVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRR-GCLPSVVTYNSLIHG 125
C G +EP + S I YC +M+ A+ FD M R P+V YN++++G
Sbjct: 146 CSSGIFSCPELEP---IFRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNG 202
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+ K D+D+A+ M E KPDV T+ L+ G+C+ K A +LF MKE G PN
Sbjct: 203 YVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPN 262
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+ + ++ G E + + M + +++DG+C
Sbjct: 263 VVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVL 322
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
+ + ++ LC E A E++ + + G P + V GL +
Sbjct: 323 DLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSG 382
Query: 306 DISRSEKYLQIMKCKGFPVDANTTELLI 333
++ +++ M G D+ T LL+
Sbjct: 383 RTEKASGFMEKMMNAGILPDSVTFNLLL 410
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 76/163 (46%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
+K + P+ Y L++ L + ++ E+ +KG P + LV+G K G
Sbjct: 326 NKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTE 385
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A M M++ G+ P+ VT+N L+ C +A ++ L +G P TY+ L+
Sbjct: 386 KASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLV 445
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGK 166
G+ K L+ EM+++ + PD+ T+ L+ G GK
Sbjct: 446 SGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGK 488
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
+ +SKG +P +Y+ L+ G K GR KEG L+ EM+ K ++PD+ T++ L+DG G
Sbjct: 428 LASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTG 487
Query: 61 LVSGARCVM 69
S + M
Sbjct: 488 KFSRKQVRM 496
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 140/314 (44%), Gaps = 12/314 (3%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
M+ + G+ P ++N LI G K E + +M PDV T++ ++DG + G
Sbjct: 199 MRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAG 258
Query: 61 LVSGARCVMGFMVH--VGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVT 118
V A V+ M+ V PNVV+Y +L+ GYC++ +++EA+ VF M+ RG P+ VT
Sbjct: 259 KVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVT 318
Query: 119 YNSLIHGWCKVKDVD--RAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFT 176
YN+LI G + D + I + G PD T+ L+ C G AA ++F
Sbjct: 319 YNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQE 378
Query: 177 MKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLD-------IVVYNVMLD 229
M P+ + +V++ L A +LF + + ++ L YN M +
Sbjct: 379 MLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFE 438
Query: 230 GMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPP 289
+C D ++ +I G C EG A ELL+ M P
Sbjct: 439 YLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVP 497
Query: 290 NRCSYNVFVHGLLR 303
+ +Y + + GLL+
Sbjct: 498 DLETYELLIDGLLK 511
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 138/318 (43%), Gaps = 13/318 (4%)
Query: 14 YNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMV 73
+N LI+ G ++E L M Q G+ P V TF+ L+ K G A + M
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 74 HV-GVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDV 132
GV P+ T+N+LI G+C ++EA ++F M C P VVTYN++I G C+ V
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 133 DRAICLLGEMVNEG--LKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCT 190
A +L M+ + + P+VV++T LV G+C + A +F M G PN T
Sbjct: 261 KIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYN 320
Query: 191 VILDGLFKCRFHSEAMSLFRAMEKSDIDL--DIVVYNVMLDGMCXXXXXXXXXXXXXXXX 248
++ GL + + E + + D +N+++ C
Sbjct: 321 TLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEML 380
Query: 249 XXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEE-------NGCPPNRCSYNVFVHGL 301
D+ +++++IR LC D AE L + E + C P +YN L
Sbjct: 381 NMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYL 440
Query: 302 LRKLDISRSEK-YLQIMK 318
++EK + Q+MK
Sbjct: 441 CANGKTKQAEKVFRQLMK 458
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 111/274 (40%), Gaps = 47/274 (17%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLY--EMMQKGVMPDVQTFSILVDGFGKEGL 61
S+G++P V+YN LI+GL + R+ E +L PD TF+IL+ G
Sbjct: 309 SRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGH 368
Query: 62 VSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFD-------LMVRRGCLP 114
+ A V M+++ + P+ +Y+ LI C+R++ + A +F+ L+ + C P
Sbjct: 369 LDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKP 428
Query: 115 SVVTYN----------------------------------SLIHGWCKVKDVDRAICLLG 140
YN +LI G C+ A LL
Sbjct: 429 LAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPSYKTLITGHCREGKFKPAYELLV 488
Query: 141 EMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCR 200
M+ PD+ T+ L+ G ++G+ L A + M +P T +L L K +
Sbjct: 489 LMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRK 548
Query: 201 FHSEAMSLFRAME----KSDIDLDIVVYNVMLDG 230
F +E+ L M + +IDL V ++
Sbjct: 549 FANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSS 582
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 98/208 (47%), Gaps = 4/208 (1%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G+Q SY LI G + G++K LL M+++ +PD++T+ +L+DG K G
Sbjct: 459 RGVQDP-PSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALL 517
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A + M+ P T++S++ R E+ + LM+ + ++ ++
Sbjct: 518 AHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVR 577
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
++A ++ + + G +V L+G C+ K L A L E Q+
Sbjct: 578 LLFSSAQKEKAFLIVRLLYDNGY---LVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMV 634
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAM 212
++ TC +++GL K + HSEA SL+ +
Sbjct: 635 DIDTCNTVIEGLCKHKRHSEAFSLYNEL 662
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 82/218 (37%), Gaps = 38/218 (17%)
Query: 119 YNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMK 178
+NSLI + ++ L M G+ P V+T+ +L+ + G+ A +LF M+
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 179 E-HGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXX 237
+G P+ T +++G K EA +F+ ME + D+V YN
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNT----------- 249
Query: 238 XXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELL--MRMEENGCPPNRCSYN 295
+I GLC G + A +L M + PN SY
Sbjct: 250 ------------------------IIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYT 285
Query: 296 VFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLI 333
V G K +I + M +G +A T LI
Sbjct: 286 TLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLI 323
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 134/268 (50%), Gaps = 2/268 (0%)
Query: 33 LLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVE-PNVVTYNSLIGGY 91
LLY G+ P+ F+ILV K G ++ A V+ M G+ PN +TY++L+
Sbjct: 183 LLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCL 242
Query: 92 CLRHQMEEAMKVF-DLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPD 150
+ +EA+++F D++ + G P VT+N +I+G+C+ +V+RA +L M G P+
Sbjct: 243 FAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPN 302
Query: 151 VVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFR 210
V ++AL+ GFC+VGK AK+ F +K+ G + T +++ + EAM L
Sbjct: 303 VYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLG 362
Query: 211 AMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEG 270
M+ S D + YNV+L G+ + ++ I++ LC G
Sbjct: 363 EMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNG 422
Query: 271 LLDEAEELLMRMEENGCPPNRCSYNVFV 298
L++A + L M E G P+ ++N V
Sbjct: 423 ELEKAVKFLSVMSERGIWPHHATWNELV 450
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 147/296 (49%), Gaps = 4/296 (1%)
Query: 42 VMPDVQTFSILVDGFGKEGLVSGARCVMGFMVH-VGVEPNVVTYNSLIGGYCLRHQMEEA 100
V P + S ++ G V+ +R ++ + H +G++PN +N L+ +C + A
Sbjct: 156 VKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFA 215
Query: 101 MKVFDLMVRRG-CLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVN-EGLKPDVVTWTALV 158
V + M R G P+ +TY++L+ A+ L +M++ EG+ PD VT+ ++
Sbjct: 216 FLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMI 275
Query: 159 GGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDID 218
GFC+ G+ AK++ MK++G PN+ + +++G K EA F ++K+ +
Sbjct: 276 NGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLK 335
Query: 219 LDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEEL 278
LD V Y +++ C DT T+N+++RGL EG +EA ++
Sbjct: 336 LDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQM 395
Query: 279 LMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKG-FPVDANTTELLI 333
L + G N+ SY + ++ L ++ ++ K+L +M +G +P A EL++
Sbjct: 396 LDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVV 451
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 90/188 (47%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
M + +GI P V++N +I G + G + +L M + G P+V +S L++GF K G
Sbjct: 258 MISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVG 317
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
+ A+ + G++ + V Y +L+ +C + +EAMK+ M C +TYN
Sbjct: 318 KIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYN 377
Query: 121 SLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEH 180
++ G + A+ +L + +EG+ + ++ ++ C G+ A + M E
Sbjct: 378 VILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSER 437
Query: 181 GQVPNLQT 188
G P+ T
Sbjct: 438 GIWPHHAT 445
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 130/316 (41%), Gaps = 42/316 (13%)
Query: 39 QKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQME 98
QKG + T+S+L+D + ++ M + + +L+ + +
Sbjct: 82 QKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFSRSDLHD 141
Query: 99 EAMKVFDLM-VRRGCLPSVVTYNSLIHGWCKVKDVD--RAICLLGEMVNEGLKPDVVTWT 155
+ M++F+L+ V PS+ ++ ++ +V+ R + L + N GL+P+ +
Sbjct: 142 KVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKH-NLGLQPNTCIFN 200
Query: 156 ALVGGFCQVGKPLAAKELFFTMKEHG-QVPNLQTCTVILDGLFKCRFHSEAMSLFRAM-E 213
LV C+ G A + MK G PN T + ++D LF EA+ LF M
Sbjct: 201 ILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMIS 260
Query: 214 KSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLD 273
K I D V TFN+MI G C G ++
Sbjct: 261 KEGISPDPV-----------------------------------TFNVMINGFCRAGEVE 285
Query: 274 EAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDA-NTTELL 332
A+++L M++NGC PN +Y+ ++G + I +++ +K G +D T L+
Sbjct: 286 RAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLM 345
Query: 333 ICIYSANKGDNAFQEL 348
C + D A + L
Sbjct: 346 NCFCRNGETDEAMKLL 361
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G++ V Y L+ + G E LL EM D T+++++ G EG A
Sbjct: 333 GLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEA 392
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ GV N +Y ++ C ++E+A+K +M RG P T+N L+
Sbjct: 393 LQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVR 452
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTM 177
C+ + + +L + GL P +W A+V C+ K + EL ++
Sbjct: 453 LCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSL 504
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 110/209 (52%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+ ++ SYN +I L K R + A L EM +G+ P++ TF+ + G+ G V
Sbjct: 420 GLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKV 479
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
V+ ++ G +P+V+T++ +I C ++++A F M+ G P+ +TYN LI
Sbjct: 480 HGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRS 539
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
C D DR++ L +M GL PD+ + A + FC++ K A+EL TM G P+
Sbjct: 540 CCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPD 599
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEK 214
T + ++ L + SEA +F ++E+
Sbjct: 600 NFTYSTLIKALSESGRESEAREMFSSIER 628
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 137/306 (44%), Gaps = 35/306 (11%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
S+G++P Y L+Q L R+ EG L +M G++ V +++ ++D K +
Sbjct: 383 SRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIE 442
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A + M G+ PN+VT+N+ + GY +R +++ V + ++ G P V+T++ +I
Sbjct: 443 NAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLII 502
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
+ C+ K++ A EM+ G++P+ +T+ L+ C G + +LF MKE+G
Sbjct: 503 NCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLS 562
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXX 243
P+L + K R +A L + M + +
Sbjct: 563 PDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKP------------------------ 598
Query: 244 XXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLR 303
D +T++ +I+ L G EA E+ +E +GC P+ + + LR
Sbjct: 599 -----------DNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTKRLVEELDLR 647
Query: 304 KLDISR 309
K +SR
Sbjct: 648 KSGLSR 653
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 133/327 (40%), Gaps = 1/327 (0%)
Query: 19 QGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVE 78
LF+ G LL E+ G + +L+ +G+ GL V + +G++
Sbjct: 118 NALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMK 177
Query: 79 PNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICL 138
P+ YN++I + ++ A F M GC P TYN LIHG CK VD AI L
Sbjct: 178 PSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRL 237
Query: 139 LGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFK 198
+ +M EG +P+V T+T L+ GF G+ A + M+ PN T + G+F+
Sbjct: 238 VKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFR 297
Query: 199 CRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYT 258
C +A + + D +L V Y+ +L + D+ T
Sbjct: 298 CLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSST 357
Query: 259 FNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMK 318
FN + L L E + G P Y V V LL S ++YL+ M
Sbjct: 358 FNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMG 417
Query: 319 CKGFPVDANTTELLI-CIYSANKGDNA 344
G + +I C+ A + +NA
Sbjct: 418 VDGLLSSVYSYNAVIDCLCKARRIENA 444
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 137/322 (42%), Gaps = 2/322 (0%)
Query: 12 VSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGK-EGLVSGARCVMG 70
V Y+ ++ L KE L ++ ++G +PD TF+ + K LV R G
Sbjct: 321 VGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDG 380
Query: 71 FMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVK 130
F V GV+P Y L+ + E + M G L SV +YN++I CK +
Sbjct: 381 F-VSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKAR 439
Query: 131 DVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCT 190
++ A L EM + G+ P++VT+ + G+ G + + HG P++ T +
Sbjct: 440 RIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFS 499
Query: 191 VILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXX 250
+I++ L + + +A F+ M + I+ + + YN+++ C
Sbjct: 500 LIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKEN 559
Query: 251 XXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRS 310
D Y +N I+ C + +AEELL M G P+ +Y+ + L S +
Sbjct: 560 GLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEA 619
Query: 311 EKYLQIMKCKGFPVDANTTELL 332
+ ++ G D+ T L+
Sbjct: 620 REMFSSIERHGCVPDSYTKRLV 641
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 130/357 (36%), Gaps = 35/357 (9%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
S G +P +YN LI G+ K G E L+ +M Q+G P+V T++IL+DGF G V
Sbjct: 208 SDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVD 267
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGG--------------------------------- 90
A + M + PN T + + G
Sbjct: 268 EALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVL 327
Query: 91 YCLRHQ--MEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLK 148
YCL + +E + + RG +P T+N+ + K D+ + V+ G+K
Sbjct: 328 YCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVK 387
Query: 149 PDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSL 208
P + LV + M G + ++ + ++D L K R A
Sbjct: 388 PGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMF 447
Query: 209 FRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCW 268
M+ I ++V +N L G D TF+++I LC
Sbjct: 448 LTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCR 507
Query: 269 EGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVD 325
+ +A + M E G PN +YN+ + D RS K MK G D
Sbjct: 508 AKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPD 564
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 142/320 (44%), Gaps = 4/320 (1%)
Query: 7 IQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGAR 66
+ T+ SY+ L++ + G +K L+ EM+Q G +TF++L+ G+ GL A
Sbjct: 145 FRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQA- 203
Query: 67 CVMGFMVH--VGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
V+ FM P +YN+++ Q + V+ M+ G P V+TYN L+
Sbjct: 204 -VVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLW 262
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
++ +DR L EM +G PD T+ L+ + KPLAA MKE G P
Sbjct: 263 TNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDP 322
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
++ T ++DGL + M K+ D+V Y VM+ G
Sbjct: 323 SVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMF 382
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
+ +T+N MIRGLC G EA LL ME GC PN Y+ V L +
Sbjct: 383 REMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKA 442
Query: 305 LDISRSEKYLQIMKCKGFPV 324
+S + K ++ M KG V
Sbjct: 443 GKLSEARKVIREMVKKGHYV 462
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 101/209 (48%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G P +++YN L+ ++ G+ L EM + G PD T++IL+ GK A
Sbjct: 249 GFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAA 308
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ M VG++P+V+ Y +LI G +E D MV+ GC P VV Y +I G
Sbjct: 309 LTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITG 368
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+ ++D+A + EM +G P+V T+ +++ G C G+ A L M+ G PN
Sbjct: 369 YVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPN 428
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEK 214
+ ++ L K SEA + R M K
Sbjct: 429 FVVYSTLVSYLRKAGKLSEARKVIREMVK 457
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 91/181 (50%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G P +YN L+ L K + L M + G+ P V ++ L+DG + G +
Sbjct: 284 GFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEAC 343
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ + MV G P+VV Y +I GY + ++++A ++F M +G LP+V TYNS+I G
Sbjct: 344 KYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRG 403
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
C + A LL EM + G P+ V ++ LV + GK A+++ M + G +
Sbjct: 404 LCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVH 463
Query: 186 L 186
L
Sbjct: 464 L 464
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KG P + +YN +I+GL G ++E LL EM +G P+ +S LV K G +S
Sbjct: 388 KGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSE 447
Query: 65 ARCVMGFMVHVG 76
AR V+ MV G
Sbjct: 448 ARKVIREMVKKG 459
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 141/299 (47%), Gaps = 12/299 (4%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G +P + L+ L K R K+ ++ M+ G++PD ++ LV+ K G V A
Sbjct: 101 GHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYA 160
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ M G N VTYN+L+ G C+ + ++++ + ++++G P+ TY+ L+
Sbjct: 161 MQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEA 220
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
K + D A+ LL E++ +G +P++V++ L+ GFC+ G+ A LF + G N
Sbjct: 221 AYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKAN 280
Query: 186 LQTCTVIL-----DGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXX 240
+ + ++L DG ++ EA SL M+ D +V YN++++ +
Sbjct: 281 VVSYNILLRCLCCDGRWE-----EANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQA 335
Query: 241 XXXXXXXXXXXXXF--DTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVF 297
F ++N +I LC EG +D + L M C PN +YN
Sbjct: 336 LQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAI 394
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 132/275 (48%), Gaps = 3/275 (1%)
Query: 44 PDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKV 103
PD+ + S D E +S + + +V G +PNV L+ C +++++A++V
Sbjct: 69 PDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRV 128
Query: 104 FDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQ 163
+LMV G +P Y L++ CK +V A+ L+ +M + G + VT+ ALV G C
Sbjct: 129 IELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCM 188
Query: 164 VGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVV 223
+G + + + + G PN T + +L+ +K R EA+ L + + ++V
Sbjct: 189 LGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVS 248
Query: 224 YNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRME 283
YNV+L G C + ++NI++R LC +G +EA LL M+
Sbjct: 249 YNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMD 308
Query: 284 ENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMK 318
P+ +YN+ ++ L R+E+ LQ++K
Sbjct: 309 GGDRAPSVVTYNILINSLAFH---GRTEQALQVLK 340
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 139/312 (44%), Gaps = 11/312 (3%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KG+ P +Y+ L++ +K E LL E++ KG P++ ++++L+ GF KEG
Sbjct: 205 KGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDD 264
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A + + G + NVV+YN L+ C + EEA + M PSVVTYN LI+
Sbjct: 265 AMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILIN 324
Query: 125 GWCKVKDVDRAICLLGEMV--NEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
++A+ +L EM N + ++ ++ C+ GK + M
Sbjct: 325 SLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRC 384
Query: 183 VPNLQTCTVILDGLFKCRFHS---EAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXX 239
PN T I G C +S EA + +++ Y ++ +C
Sbjct: 385 KPNEGTYNAI--GSL-CEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFA 441
Query: 240 XXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEEN-GCPPNRCSYNVFV 298
D +T++ +IRGLC EG+ A E+L MEE+ C P ++N +
Sbjct: 442 AFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMI 501
Query: 299 HGL--LRKLDIS 308
GL +R+ D++
Sbjct: 502 LGLCKIRRTDLA 513
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 138/325 (42%), Gaps = 15/325 (4%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KG +P +VSYN L+ G K GR + L E+ KG +V +++IL+ +G
Sbjct: 240 KGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEE 299
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVR--RGCLPSVVTYNSL 122
A ++ M P+VVTYN LI + E+A++V M + + +YN +
Sbjct: 300 ANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPV 359
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
I CK VD + L EM+ KP+ T+ A +G C+ + +E F+ ++
Sbjct: 360 IARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNA-IGSLCEHNSKV--QEAFYIIQ---S 413
Query: 183 VPNLQTCTV------ILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXX 236
+ N Q C ++ L + A L M + D D Y+ ++ G+C
Sbjct: 414 LSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGM 473
Query: 237 XXXXXXXXXXXXXXXXXFDTY-TFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYN 295
T FN MI GLC D A E+ M E PN +Y
Sbjct: 474 FTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYA 533
Query: 296 VFVHGLLRKLDISRSEKYLQIMKCK 320
+ V G+ + ++ +++ L ++ +
Sbjct: 534 ILVEGIAHEDELELAKEVLDELRLR 558
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 86/213 (40%), Gaps = 36/213 (16%)
Query: 2 KNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSIL--------- 52
K + + T SYN +I L K G+ L EM+ + P+ T++ +
Sbjct: 344 KGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSK 403
Query: 53 --------------------------VDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNS 86
+ ++G A ++ M G +P+ TY++
Sbjct: 404 VQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSA 463
Query: 87 LIGGYCLRHQMEEAMKVFDLMVR-RGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNE 145
LI G CL AM+V +M C P+V +N++I G CK++ D A+ + MV +
Sbjct: 464 LIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEK 523
Query: 146 GLKPDVVTWTALVGGFCQVGKPLAAKELFFTMK 178
P+ T+ LV G + AKE+ ++
Sbjct: 524 KRMPNETTYAILVEGIAHEDELELAKEVLDELR 556
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 147/315 (46%), Gaps = 11/315 (3%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+ P +++YN LI+G +F E + M + G+ PDV T++ L+ G K +++
Sbjct: 43 GVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRV 102
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVR-RGCLPSVVTYNSLIH 124
+ M+H G+ P++ +YN+L+ Y + EA K+ + G +P + TYN L+
Sbjct: 103 LQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLD 162
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
CK D AI L + + +KP+++T+ L+ G C+ + + + +K+ G P
Sbjct: 163 ALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTP 221
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLD-----IVVYNVMLDGMCXXXXXXX 239
N T T +L FK + + + LF M+K D VV ++ G
Sbjct: 222 NAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECM 281
Query: 240 XXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVH 299
D ++N ++ +G LD ++LL +E G P+ ++ + V+
Sbjct: 282 HELVRSGTRSQ----DIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVN 337
Query: 300 GLLRKLDISRSEKYL 314
GLL + +EK+L
Sbjct: 338 GLLNIGNTGGAEKHL 352
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 144/321 (44%), Gaps = 3/321 (0%)
Query: 15 NCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVH 74
N + L KF + LL + ++ GV+PDV T++ L+ G+ + + A V M
Sbjct: 17 NISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMRE 76
Query: 75 VGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDR 134
G+EP+V TYNSLI G + +++FD M+ G P + +YN+L+ + K+
Sbjct: 77 AGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGE 136
Query: 135 AICLLGEMVN-EGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVIL 193
A +L E ++ GL P + T+ L+ C+ G A ELF +K + P L T +++
Sbjct: 137 AFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSRVK-PELMTYNILI 195
Query: 194 DGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXX 253
+GL K R + R ++KS + V Y ML
Sbjct: 196 NGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYT 255
Query: 254 FDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGC-PPNRCSYNVFVHGLLRKLDISRSEK 312
FD + ++ L G +EA E + + +G + SYN ++ + ++ +
Sbjct: 256 FDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDD 315
Query: 313 YLQIMKCKGFPVDANTTELLI 333
L+ ++ KG D T +++
Sbjct: 316 LLEEIEMKGLKPDDYTHTIIV 336
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 123/262 (46%), Gaps = 38/262 (14%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+ P I +YN L+ L K G + A L++ ++ V P++ T++IL++G K V
Sbjct: 149 GLVPGIDTYNILLDALCKSGH-TDNAIELFKHLKSRVKPELMTYNILINGLCKSRRVGSV 207
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRG-------------- 111
+M + G PN VTY +++ Y ++E+ +++F M + G
Sbjct: 208 DWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSA 267
Query: 112 ------------CL----------PSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKP 149
C+ +V+YN+L++ + K ++D LL E+ +GLKP
Sbjct: 268 LIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKP 327
Query: 150 DVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLF 209
D T T +V G +G A++ + E G P++ TC ++DGL K AM LF
Sbjct: 328 DDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLF 387
Query: 210 RAME-KSDIDLDIVVYNVMLDG 230
+ME + + VV+N+ DG
Sbjct: 388 ASMEVRDEFTYTSVVHNLCKDG 409
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 82/168 (48%), Gaps = 4/168 (2%)
Query: 11 IVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMG 70
IVSYN L+ FK G LL E+ KG+ PD T +I+V+G G GA +
Sbjct: 294 IVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLA 353
Query: 71 FMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVK 130
+ +G++P+VVT N LI G C ++ AM++F M R TY S++H CK
Sbjct: 354 CIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVR----DEFTYTSVVHNLCKDG 409
Query: 131 DVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMK 178
+ A LL N+G+K A++ G + AA++ +K
Sbjct: 410 RLVCASKLLLSCYNKGMKIPSSARRAVLSGIRETVSYQAARKTHIKIK 457
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 154/335 (45%), Gaps = 4/335 (1%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G++P + CL+ L K G KE A ++E M++ P+++ F+ L+ G+ +EG + A
Sbjct: 197 GLEPDEYVFGCLLDALCKNGSVKE-ASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEA 255
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ V+ M G+EP++V + +L+ GY +M +A + + M +RG P+V Y LI
Sbjct: 256 KEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQA 315
Query: 126 WCKV-KDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
C+ K +D A+ + EM G + D+VT+TAL+ GFC+ G + M++ G +P
Sbjct: 316 LCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMP 375
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
+ T I+ K E + L M++ D+++YNV++ C
Sbjct: 376 SQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLW 435
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENG--CPPNRCSYNVFVHGLL 302
TF IMI G +G L EA M G P + ++ L+
Sbjct: 436 NEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLV 495
Query: 303 RKLDISRSEKYLQIMKCKGFPVDANTTELLICIYS 337
R + ++ + K + N + I I++
Sbjct: 496 RDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHA 530
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 149/325 (45%), Gaps = 11/325 (3%)
Query: 32 GLLYEMMQKGV-MPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGG 90
GL+ EM + + + + F +L+ F +V A V+ M G+EP+ + L+
Sbjct: 152 GLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDA 211
Query: 91 YCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPD 150
C ++EA KVF+ M R P++ + SL++GWC+ + A +L +M GL+PD
Sbjct: 212 LCKNGSVKEASKVFEDM-REKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPD 270
Query: 151 VVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHS---EAMS 207
+V +T L+ G+ GK A +L M++ G PN+ TV++ L CR EAM
Sbjct: 271 IVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQAL--CRTEKRMDEAMR 328
Query: 208 LFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLC 267
+F ME+ + DIV Y ++ G C T+ ++
Sbjct: 329 VFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHE 388
Query: 268 WEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDAN 327
+ +E EL+ +M+ GC P+ YNV + + ++ + + M+ G +
Sbjct: 389 KKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVD 448
Query: 328 TTELLICIYSAN----KGDNAFQEL 348
T ++I +++ + N F+E+
Sbjct: 449 TFVIMINGFTSQGFLIEACNHFKEM 473
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 97/197 (49%), Gaps = 3/197 (1%)
Query: 5 KGIQPTIVSYNCLIQGLFKF-GRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
+G +P + Y LIQ L + R E + EM + G D+ T++ L+ GF K G++
Sbjct: 300 RGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMID 359
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
V+ M GV P+ VTY ++ + + Q EE +++ + M RRGC P ++ YN +I
Sbjct: 360 KGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVI 419
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHG-- 181
CK+ +V A+ L EM GL P V T+ ++ GF G + A F M G
Sbjct: 420 RLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIF 479
Query: 182 QVPNLQTCTVILDGLFK 198
P T +L+ L +
Sbjct: 480 SAPQYGTLKSLLNNLVR 496
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 136/316 (43%), Gaps = 36/316 (11%)
Query: 37 MMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQ 96
M + G+ P+ TF+IL + F + + M G EP++VTYN+L+ YC R +
Sbjct: 227 MCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGR 286
Query: 97 MEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTA 156
++EA ++ +M RR +P +VTY SLI G CK V A MV+ G+KPD +++
Sbjct: 287 LKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNT 346
Query: 157 LVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFK------------------ 198
L+ +C+ G +K+L M + VP+ TC VI++G +
Sbjct: 347 LIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLK 406
Query: 199 -------CRF-----------HSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXX 240
C F + L R +E+ + YN +++ +
Sbjct: 407 VDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEA 466
Query: 241 XXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHG 300
D T+ +I LC G EAE L+ M ++ P+ V+G
Sbjct: 467 LVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYG 526
Query: 301 LLRKLDISRSEKYLQI 316
++LD ++E+ L +
Sbjct: 527 YCKELDFDKAERLLSL 542
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 134/300 (44%), Gaps = 5/300 (1%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G +P +V+YN L+ + GR KE L M ++ V+PD+ T++ L+ G K+G V
Sbjct: 265 EGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVRE 324
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A MV G++P+ ++YN+LI YC M+++ K+ M+ +P T ++
Sbjct: 325 AHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVE 384
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELF-FTMKEHGQV 183
G+ + + A+ + E+ + L+ CQ GKP AAK L ++E G
Sbjct: 385 GFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHE 444
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXX 243
+T +++ L +C EA+ L ++ + LD Y ++ +C
Sbjct: 445 AKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESL 504
Query: 244 XXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEEL--LMRMEENGCPPNRCSYNVFVHGL 301
D++ ++ G C E D+AE L L ME P SYN V +
Sbjct: 505 MAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPE--SYNSLVKAV 562
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 133/323 (41%), Gaps = 1/323 (0%)
Query: 12 VSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGF 71
V ++ L++G K G +EG + E++ G V T + L++G K L+ V
Sbjct: 167 VVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSV 226
Query: 72 MVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKD 131
M VG+ PN T+N L +C E + M G P +VTYN+L+ +C+
Sbjct: 227 MCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGR 286
Query: 132 VDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTV 191
+ A L M + PD+VT+T+L+ G C+ G+ A + F M + G P+ +
Sbjct: 287 LKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNT 346
Query: 192 ILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXX 251
++ K ++ L M + + D V+++G
Sbjct: 347 LIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLK 406
Query: 252 XXFDTYTFNIMIRGLCWEGLLDEAEELLMR-MEENGCPPNRCSYNVFVHGLLRKLDISRS 310
+ +I LC EG A+ LL R +EE G +YN + L R I +
Sbjct: 407 VDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEA 466
Query: 311 EKYLQIMKCKGFPVDANTTELLI 333
+K + +DA T LI
Sbjct: 467 LVLKGKLKNQNQVLDAKTYRALI 489
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 111/260 (42%), Gaps = 35/260 (13%)
Query: 45 DVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVF 104
D F +LV G+ K GLV V ++ G +VVT N L+ G ME+ +V+
Sbjct: 165 DPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVY 224
Query: 105 DLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQV 164
+M R G P+ T+N L + +C + L +M EG +PD+VT+ LV +C+
Sbjct: 225 SVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRR 284
Query: 165 GKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVY 224
G+ A L+ M VP+L T T ++ GL K EA F M I D + Y
Sbjct: 285 GRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSY 344
Query: 225 NVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEE 284
N +I C EG++ ++++LL M
Sbjct: 345 NT-----------------------------------LIYAYCKEGMMQQSKKLLHEMLG 369
Query: 285 NGCPPNRCSYNVFVHGLLRK 304
N P+R + V V G +R+
Sbjct: 370 NSVVPDRFTCKVIVEGFVRE 389
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 2/182 (1%)
Query: 17 LIQGLFKFGRWKEGAGLLYEMMQK-GVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHV 75
LI L + G+ LL ++++ G +T++ L++ + + A + G + +
Sbjct: 417 LIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQ 476
Query: 76 GVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRA 135
+ TY +LIG C + EA + M P +L++G+CK D D+A
Sbjct: 477 NQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKA 536
Query: 136 ICLLGEMVNEGLKPDVVTWTALVGGFCQVG-KPLAAKELFFTMKEHGQVPNLQTCTVILD 194
LL E D ++ +LV C+ G A EL M+ G VPN TC ++
Sbjct: 537 ERLLSLFAMEFRIFDPESYNSLVKAVCETGCGYKKALELQERMQRLGFVPNRLTCKYLIQ 596
Query: 195 GL 196
L
Sbjct: 597 VL 598
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 159/349 (45%), Gaps = 32/349 (9%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G +P+++SY L+ + ++ + ++ E+ Q G D F+ +++ F + G + A
Sbjct: 75 GHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDA 134
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCL---PSVVTYNSL 122
+ M +G+ P TYN+LI GY + + E + ++ DLM+ G + P++ T+N L
Sbjct: 135 VQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVL 194
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELF---FTMKE 179
+ WCK K V+ A ++ +M G++PD VT+ + + Q G+ + A+ MKE
Sbjct: 195 VQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKE 254
Query: 180 HGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXX---- 235
+ PN +TC +++ G + + + R M++ ++ ++VV+N +++G
Sbjct: 255 KAK-PNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDG 313
Query: 236 ---------------------XXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDE 274
D T++ ++ G +++
Sbjct: 314 IDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEK 373
Query: 275 AEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFP 323
A ++ M + G P+ +Y++ G +R + ++E+ L+ + + P
Sbjct: 374 AAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRP 422
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 162/392 (41%), Gaps = 66/392 (16%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKG---VMPDVQTFSILVDGFGKEGLV 62
G+ PT +YN LI+G G+ + + LL M+++G V P+++TF++LV + K+ V
Sbjct: 145 GLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKV 204
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSL----------------------------------- 87
A V+ M GV P+ VTYN++
Sbjct: 205 EEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCG 264
Query: 88 --IGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNE 145
+GGYC ++ + ++ M ++V +NSLI+G+ +V D D
Sbjct: 265 IVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRD------------ 312
Query: 146 GLKPDVVTWTALVGGFCQ----VGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRF 201
G+ D VT T L+ F + VG ++ MKE ++ T + +++ +
Sbjct: 313 GI--DEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGY 370
Query: 202 HSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNI 261
+A +F+ M K+ + D Y+++ G + F
Sbjct: 371 MEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRP-NVVIFTT 429
Query: 262 MIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKG 321
+I G C G +D+A + +M + G PN ++ + G L ++E+ LQ+M+ G
Sbjct: 430 VISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCG 489
Query: 322 FPVDANTTELLICIY-------SANKGDNAFQ 346
+ +T LL + +NK NA +
Sbjct: 490 VKPENSTFLLLAEAWRVAGLTDESNKAINALK 521
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 114/266 (42%), Gaps = 5/266 (1%)
Query: 46 VQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFD 105
V++ + L++ + G A+ V + G P++++Y +L+ ++ Q +
Sbjct: 45 VRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVS 104
Query: 106 LMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVG 165
+ + G + +N++I+ + + +++ A+ L +M GL P T+ L+ G+ G
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAG 164
Query: 166 KPLAAKELFFTMKEHGQV---PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIV 222
KP + EL M E G V PN++T V++ K + EA + + ME+ + D V
Sbjct: 165 KPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTV 224
Query: 223 VYNVMLDGMCXX--XXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLM 280
YN + + T I++ G C EG + + +
Sbjct: 225 TYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVR 284
Query: 281 RMEENGCPPNRCSYNVFVHGLLRKLD 306
RM+E N +N ++G + +D
Sbjct: 285 RMKEMRVEANLVVFNSLINGFVEVMD 310
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 95/195 (48%), Gaps = 1/195 (0%)
Query: 25 GRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTY 84
G K +L M + V DV T+S +++ + G + A V MV GV+P+ Y
Sbjct: 334 GNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAY 393
Query: 85 NSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVN 144
+ L GY + ++A ++ + ++ P+VV + ++I GWC +D A+ + +M
Sbjct: 394 SILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCK 452
Query: 145 EGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSE 204
G+ P++ T+ L+ G+ +V +P A+E+ M+ G P T ++ + E
Sbjct: 453 FGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDE 512
Query: 205 AMSLFRAMEKSDIDL 219
+ A++ DI++
Sbjct: 513 SNKAINALKCKDIEI 527
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 83/200 (41%), Gaps = 4/200 (2%)
Query: 151 VVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFR 210
V + T L+ + G+P A+ +F T+ E G P+L + T +L + + + S+
Sbjct: 45 VRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVS 104
Query: 211 AMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEG 270
+E+S LD + +N +++ T T+N +I+G G
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAG 164
Query: 271 LLDEAEELLMRMEENG---CPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDAN 327
+ + ELL M E G PN ++NV V +K + + + ++ M+ G D
Sbjct: 165 KPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTV 224
Query: 328 TTELLICIYSANKGDNAFQE 347
T + Y KG+ E
Sbjct: 225 TYNTIATCY-VQKGETVRAE 243
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 113/220 (51%), Gaps = 2/220 (0%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGK-EGLVSG 64
G +P I L++ L + GR + L ++ +G + + + +DG K EG+ G
Sbjct: 539 GFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRG 598
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
+ G P+V+ Y+ LI C + EA +F+ MV +G P+V TYNS+I
Sbjct: 599 LELFRDICAN-GHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMID 657
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
GWCK ++DR + + M + PDV+T+T+L+ G C G+P A + MK P
Sbjct: 658 GWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYP 717
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVY 224
N T ++ GL KC + EA+ FR ME+ +++ D VY
Sbjct: 718 NRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVY 757
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 117/263 (44%)
Query: 39 QKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQME 98
K ++PD + SI+++ K V A ++ +V G+ P + YN++I G C + E
Sbjct: 432 NKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSE 491
Query: 99 EAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALV 158
E++K+ M G PS T N + + D A+ LL +M G +P + T LV
Sbjct: 492 ESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLV 551
Query: 159 GGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDID 218
C+ G+ + A + + G + ++ T +DGL K + LFR + +
Sbjct: 552 KKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHC 611
Query: 219 LDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEEL 278
D++ Y+V++ +C T+N MI G C EG +D
Sbjct: 612 PDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSC 671
Query: 279 LMRMEENGCPPNRCSYNVFVHGL 301
++RM E+ P+ +Y +HGL
Sbjct: 672 IVRMYEDEKNPDVITYTSLIHGL 694
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 134/328 (40%), Gaps = 1/328 (0%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+ P + YN +I+G+ K GR +E LL EM GV P T + + + GA
Sbjct: 469 GLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGA 528
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ M G EP + L+ C + +A K D + G L +V + I G
Sbjct: 529 LDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDG 588
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
K + VDR + L ++ G PDV+ + L+ C+ + + A LF M G P
Sbjct: 589 LIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPT 648
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+ T ++DG K +S M + + + D++ Y ++ G+C
Sbjct: 649 VATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWN 708
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
+ TF +I+GLC G EA MEE P+ Y V L
Sbjct: 709 EMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSE 768
Query: 306 DISRSEKYLQIMKCKG-FPVDANTTELL 332
+I+ + M KG FPV + +L
Sbjct: 769 NINAGFGIFREMVHKGRFPVSVDRNYML 796
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 122/301 (40%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
++K I P S + +I L K + LL++++Q G++P ++ +++G KEG
Sbjct: 431 HNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRS 490
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
+ ++G M GVEP+ T N + G R A+ + M G P + L
Sbjct: 491 EESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFL 550
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
+ C+ A L ++ EG +V TA + G + ELF + +G
Sbjct: 551 VKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGH 610
Query: 183 VPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXX 242
P++ V++ L K EA LF M + + YN M+DG C
Sbjct: 611 CPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLS 670
Query: 243 XXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLL 302
D T+ +I GLC G EA M+ C PNR ++ + GL
Sbjct: 671 CIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLC 730
Query: 303 R 303
+
Sbjct: 731 K 731
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 93/182 (51%), Gaps = 2/182 (1%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
+ G P +++Y+ LI+ L K R E L EM+ KG+ P V T++ ++DG+ KEG +
Sbjct: 607 ANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEID 666
Query: 64 -GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
G C++ M P+V+TY SLI G C + EA+ ++ M + C P+ +T+ +L
Sbjct: 667 RGLSCIVR-MYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMAL 725
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
I G CK A+ EM + ++PD + +LV F A +F M G+
Sbjct: 726 IQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGR 785
Query: 183 VP 184
P
Sbjct: 786 FP 787
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 80/181 (44%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G +V+ I GL K G L ++ G PDV + +L+ K
Sbjct: 573 EGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTME 632
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A + MV G++P V TYNS+I G+C +++ + M P V+TY SLIH
Sbjct: 633 ADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIH 692
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G C AI EM + P+ +T+ AL+ G C+ G A F M+E P
Sbjct: 693 GLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEP 752
Query: 185 N 185
+
Sbjct: 753 D 753
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 99/231 (42%), Gaps = 4/231 (1%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G + + +YN + L + + L+ +++ F + G GLV
Sbjct: 100 EGYRNDMYAYNAMASILSRARQNASLKALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDE 159
Query: 65 ARCVMGFMVHVGV-EPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGC--LPSVVTYNS 121
A V + +G+ PN TYN L+ + + L R C T
Sbjct: 160 ASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTP 219
Query: 122 LIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHG 181
++ +C +RA+ + E+++ G + ++ T LV FC+ G+ A EL ++E
Sbjct: 220 VLQVYCNTGKSERALSVFNEILSRGWLDEHIS-TILVVSFCKWGQVDKAFELIEMLEERD 278
Query: 182 QVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMC 232
N +T V++ G K +A LF M + ++ DI +Y+V++ G+C
Sbjct: 279 IRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLC 329
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 92/219 (42%), Gaps = 12/219 (5%)
Query: 97 MEEAMKVFDLMVRRG-CLPSVVTYNSLIHGWCKV--KDVDRAICLLGEMVNEGLKPDVVT 153
++EA VFD + G C+P+ TYN L+ K V+ L EM + G D T
Sbjct: 157 VDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFT 216
Query: 154 WTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAME 213
T ++ +C GK A +F + G + T+++ K +A L +E
Sbjct: 217 LTPVLQVYCNTGKSERALSVFNEILSRGWLDE-HISTILVVSFCKWGQVDKAFELIEMLE 275
Query: 214 KSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLD 273
+ DI L+ Y V++ G D ++++I GLC L+
Sbjct: 276 ERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLE 335
Query: 274 EAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEK 312
A L + ++ +G PP+R G+L KL S SE+
Sbjct: 336 MALSLYLEIKRSGIPPDR--------GILGKLLCSFSEE 366
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 139/352 (39%), Gaps = 34/352 (9%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEG--AGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGAR 66
P +YNCL++ + K L EM G D T + ++ + G A
Sbjct: 175 PNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERAL 234
Query: 67 CVMGFMVHVG-VEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
V ++ G ++ ++ T L+ +C Q+++A ++ +++ R + TY LIHG
Sbjct: 235 SVFNEILSRGWLDEHISTI--LVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHG 292
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+ K +D+A L +M G+ D+ + L+GG C+ A L+ +K G P+
Sbjct: 293 FVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPD 352
Query: 186 LQTCTVILDGLFKCRFHSEA------------------MSLFRAMEKSDIDLDIV--VYN 225
+L C F E+ M L++++ + I D+V Y+
Sbjct: 353 RGILGKLL-----CSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYS 407
Query: 226 VMLDGMCXXXXXXXXXXXXXXXXXXXXXF-DTYTFNIMIRGLCWEGLLDEAEELLMRMEE 284
+ + M D+ + +I+I L +D A LL + +
Sbjct: 408 FIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQ 467
Query: 285 NGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLICIY 336
NG P YN + G+ ++ S K L MK G T L CIY
Sbjct: 468 NGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFT---LNCIY 516
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 143/333 (42%), Gaps = 37/333 (11%)
Query: 19 QGLFKFGRWKEGAGLLYEM-MQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGV 77
Q L + + G Y + Q G D T++ +V G+ ++ MV G
Sbjct: 336 QVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGC 395
Query: 78 EPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAIC 137
+PN VTYN LI Y + + EAM VF+ M GC P VTY +LI K +D A+
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 138 LLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLF 197
+ M GL PD T++ ++ + G AA +LF M + G PNL T +++D
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 198 KCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTY 257
K R + A+ L+R M+ + + D V Y+++++
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVME---------------------------- 547
Query: 258 TFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIM 317
+ G C G L+EAE + M++ P+ Y + V + ++ ++ ++ Q M
Sbjct: 548 -----VLGHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM 600
Query: 318 KCKGFPVDANT-TELLICIYSANKGDNAFQELQ 349
G + T LL NK A++ LQ
Sbjct: 601 LHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQ 633
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 105/224 (46%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G QP V+YN LI + E + +M + G PD T+ L+D K G + A
Sbjct: 394 GCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIA 453
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ M G+ P+ TY+ +I + A K+F MV +GC P++VTYN ++
Sbjct: 454 MDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDL 513
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
K ++ A+ L +M N G +PD VT++ ++ G A+ +F M++ +P+
Sbjct: 514 HAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPD 573
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLD 229
+++D K +A ++AM + + ++ N +L
Sbjct: 574 EPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLS 617
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 113/229 (49%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
+K G + +Y ++ L + ++ LL EM++ G P+ T++ L+ +G+
Sbjct: 354 LKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRAN 413
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
++ A V M G +P+ VTY +LI + ++ AM ++ M G P TY+
Sbjct: 414 YLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYS 473
Query: 121 SLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEH 180
+I+ K + A L EMV++G P++VT+ ++ + A +L+ M+
Sbjct: 474 VIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA 533
Query: 181 GQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLD 229
G P+ T +++++ L C + EA ++F M++ + D VY +++D
Sbjct: 534 GFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVD 582
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
M+N+ G +P V+Y+ +++ L G +E + EM QK +PD + +LVD +GK G
Sbjct: 530 MQNA-GFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAG 588
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
V A M+H G+ PNV T NSL+ + +++ EA ++ M+ G PS+ TY
Sbjct: 589 NVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYT 648
Query: 121 SLI 123
L+
Sbjct: 649 LLL 651
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G P +V+YN ++ K ++ L +M G PD T+SI+++ G G +
Sbjct: 498 QGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEE 557
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A V M P+ Y L+ + +E+A + + M+ G P+V T NSL+
Sbjct: 558 AEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLS 617
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALV 158
+ +V + A LL M+ GL+P + T+T L+
Sbjct: 618 TFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 143/333 (42%), Gaps = 37/333 (11%)
Query: 19 QGLFKFGRWKEGAGLLYEM-MQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGV 77
Q L + + G Y + Q G D T++ +V G+ ++ MV G
Sbjct: 336 QVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGC 395
Query: 78 EPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAIC 137
+PN VTYN LI Y + + EAM VF+ M GC P VTY +LI K +D A+
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 138 LLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLF 197
+ M GL PD T++ ++ + G AA +LF M + G PNL T +++D
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 198 KCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTY 257
K R + A+ L+R M+ + + D V Y+++++
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVME---------------------------- 547
Query: 258 TFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIM 317
+ G C G L+EAE + M++ P+ Y + V + ++ ++ ++ Q M
Sbjct: 548 -----VLGHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM 600
Query: 318 KCKGFPVDANT-TELLICIYSANKGDNAFQELQ 349
G + T LL NK A++ LQ
Sbjct: 601 LHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQ 633
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 105/224 (46%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G QP V+YN LI + E + +M + G PD T+ L+D K G + A
Sbjct: 394 GCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIA 453
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ M G+ P+ TY+ +I + A K+F MV +GC P++VTYN ++
Sbjct: 454 MDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDL 513
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
K ++ A+ L +M N G +PD VT++ ++ G A+ +F M++ +P+
Sbjct: 514 HAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPD 573
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLD 229
+++D K +A ++AM + + ++ N +L
Sbjct: 574 EPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLS 617
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 113/229 (49%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
+K G + +Y ++ L + ++ LL EM++ G P+ T++ L+ +G+
Sbjct: 354 LKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRAN 413
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
++ A V M G +P+ VTY +LI + ++ AM ++ M G P TY+
Sbjct: 414 YLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYS 473
Query: 121 SLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEH 180
+I+ K + A L EMV++G P++VT+ ++ + A +L+ M+
Sbjct: 474 VIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA 533
Query: 181 GQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLD 229
G P+ T +++++ L C + EA ++F M++ + D VY +++D
Sbjct: 534 GFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVD 582
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
M+N+ G +P V+Y+ +++ L G +E + EM QK +PD + +LVD +GK G
Sbjct: 530 MQNA-GFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAG 588
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
V A M+H G+ PNV T NSL+ + +++ EA ++ M+ G PS+ TY
Sbjct: 589 NVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYT 648
Query: 121 SLI 123
L+
Sbjct: 649 LLL 651
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G P +V+YN ++ K ++ L +M G PD T+SI+++ G G +
Sbjct: 498 QGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEE 557
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A V M P+ Y L+ + +E+A + + M+ G P+V T NSL+
Sbjct: 558 AEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLS 617
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALV 158
+ +V + A LL M+ GL+P + T+T L+
Sbjct: 618 TFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 142/296 (47%), Gaps = 7/296 (2%)
Query: 11 IVSYNCLIQGLFKFGRWKEG--AGLLYEMMQKGVMPDVQTFSILVDGFGK-EGLVSGARC 67
+ + NCL+ L GR K G A +L++ +++ P++ T+++L++G+ + L+ AR
Sbjct: 264 VETINCLLDSL---GRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAAR- 319
Query: 68 VMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWC 127
+ M+ G++P++V +N ++ G + +A+K+F +M +G P+V +Y +I +C
Sbjct: 320 IWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFC 379
Query: 128 KVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQ 187
K ++ AI +MV+ GL+PD +T L+ GF K EL M+E G P+ +
Sbjct: 380 KQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGK 439
Query: 188 TCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXX 247
T ++ + + A ++ M +++I+ I +N+++
Sbjct: 440 TYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEM 499
Query: 248 XXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLR 303
D ++ ++IRGL EG EA L M + G YN F R
Sbjct: 500 IKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHR 555
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 105/223 (47%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCV 68
P +++Y L+ G + E A + +M+ +G+ PD+ +++++G + S A +
Sbjct: 296 PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKL 355
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
M G PNV +Y +I +C + ME A++ FD MV G P Y LI G+
Sbjct: 356 FHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGT 415
Query: 129 VKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQT 188
K +D LL EM +G PD T+ AL+ P A ++ M ++ P++ T
Sbjct: 416 QKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHT 475
Query: 189 CTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGM 231
+I+ F R + +++ M K I D Y V++ G+
Sbjct: 476 FNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGL 518
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 105/221 (47%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G++P IV++N +++GL + + + L + M KG P+V++++I++ F K+ +
Sbjct: 327 QGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMET 386
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A MV G++P+ Y LI G+ + +++ ++ M +G P TYN+LI
Sbjct: 387 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK 446
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
K + A + +M+ ++P + T+ ++ + + ++ M + G P
Sbjct: 447 LMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICP 506
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYN 225
+ + TV++ GL EA M + ++ YN
Sbjct: 507 DDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYN 547
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 129/289 (44%), Gaps = 4/289 (1%)
Query: 12 VSYNCLIQGLFKFGRWKEGAGLLY--EMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVM 69
+S++ +++ L +F ++ A + ++G D +T++ ++ K V+
Sbjct: 159 LSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVL 218
Query: 70 GFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKV 129
M G+ + T+ + + + ++A+ +F+LM + V T N L+ +
Sbjct: 219 EEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRA 277
Query: 130 KDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTC 189
K + + +L + + E P+++T+T L+ G+C+V + A ++ M + G P++
Sbjct: 278 K-LGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAH 336
Query: 190 TVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXX 249
V+L+GL + R S+A+ LF M+ ++ Y +M+ C
Sbjct: 337 NVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVD 396
Query: 250 XXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFV 298
D + +I G + LD ELL M+E G PP+ +YN +
Sbjct: 397 SGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALI 445
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 82/177 (46%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+QP Y CLI G + LL EM +KG PD +T++ L+ + + A
Sbjct: 398 GLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHA 457
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ M+ +EP++ T+N ++ Y + E V++ M+++G P +Y LI G
Sbjct: 458 TRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRG 517
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
A L EM+++G+K ++ + F + G+P +EL K G+
Sbjct: 518 LIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGK 574
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 80/168 (47%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
SKG P + SY +I+ K + +M+ G+ PD ++ L+ GFG + +
Sbjct: 360 KSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL 419
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
++ M G P+ TYN+LI + E A ++++ M++ PS+ T+N +
Sbjct: 420 DTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMI 479
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAA 170
+ + ++ + + EM+ +G+ PD ++T L+ G GK A
Sbjct: 480 MKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREA 527
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 102/257 (39%), Gaps = 3/257 (1%)
Query: 93 LRHQMEEAMKVFDLMV-RRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDV 151
RH + A + F R+G TYNS++ K + + + +L EM +GL +
Sbjct: 171 FRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-M 229
Query: 152 VTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRA 211
T+T + F + A +F MK++ ++T +LD L + + EA LF
Sbjct: 230 ETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDK 289
Query: 212 MEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGL 271
+ K +++ Y V+L+G C D N+M+ GL
Sbjct: 290 L-KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRK 348
Query: 272 LDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTEL 331
+A +L M+ G PN SY + + ++ + + +Y M G DA
Sbjct: 349 KSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTC 408
Query: 332 LICIYSANKGDNAFQEL 348
LI + K + EL
Sbjct: 409 LITGFGTQKKLDTVYEL 425
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 143/333 (42%), Gaps = 37/333 (11%)
Query: 19 QGLFKFGRWKEGAGLLYEM-MQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGV 77
Q L + + G Y + Q G D T++ +V G+ ++ MV G
Sbjct: 336 QVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGC 395
Query: 78 EPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAIC 137
+PN VTYN LI Y + + EAM VF+ M GC P VTY +LI K +D A+
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 138 LLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLF 197
+ M GL PD T++ ++ + G AA +LF M + G PNL T +++D
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 198 KCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTY 257
K R + A+ L+R M+ + + D V Y+++++
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVME---------------------------- 547
Query: 258 TFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIM 317
+ G C G L+EAE + M++ P+ Y + V + ++ ++ ++ Q M
Sbjct: 548 -----VLGHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM 600
Query: 318 KCKGFPVDANT-TELLICIYSANKGDNAFQELQ 349
G + T LL NK A++ LQ
Sbjct: 601 LHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQ 633
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 105/224 (46%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G QP V+YN LI + E + +M + G PD T+ L+D K G + A
Sbjct: 394 GCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIA 453
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ M G+ P+ TY+ +I + A K+F MV +GC P++VTYN ++
Sbjct: 454 MDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDL 513
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
K ++ A+ L +M N G +PD VT++ ++ G A+ +F M++ +P+
Sbjct: 514 HAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPD 573
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLD 229
+++D K +A ++AM + + ++ N +L
Sbjct: 574 EPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLS 617
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 113/229 (49%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
+K G + +Y ++ L + ++ LL EM++ G P+ T++ L+ +G+
Sbjct: 354 LKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRAN 413
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
++ A V M G +P+ VTY +LI + ++ AM ++ M G P TY+
Sbjct: 414 YLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYS 473
Query: 121 SLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEH 180
+I+ K + A L EMV++G P++VT+ ++ + A +L+ M+
Sbjct: 474 VIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA 533
Query: 181 GQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLD 229
G P+ T +++++ L C + EA ++F M++ + D VY +++D
Sbjct: 534 GFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVD 582
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
M+N+ G +P V+Y+ +++ L G +E + EM QK +PD + +LVD +GK G
Sbjct: 530 MQNA-GFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAG 588
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
V A M+H G+ PNV T NSL+ + +++ EA ++ M+ G PS+ TY
Sbjct: 589 NVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYT 648
Query: 121 SLI 123
L+
Sbjct: 649 LLL 651
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G P +V+YN ++ K ++ L +M G PD T+SI+++ G G +
Sbjct: 498 QGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEE 557
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A V M P+ Y L+ + +E+A + + M+ G P+V T NSL+
Sbjct: 558 AEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLS 617
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALV 158
+ +V + A LL M+ GL+P + T+T L+
Sbjct: 618 TFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 133/298 (44%), Gaps = 3/298 (1%)
Query: 39 QKGVMPDVQTFSILVDGF--GKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQ 96
Q P TF IL+ + +S V+ MV+ G+EP+ VT + + C +
Sbjct: 115 QPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGR 174
Query: 97 MEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNE-GLKPDVVTWT 155
++EA + + + P TYN L+ CK KD+ + EM ++ +KPD+V++T
Sbjct: 175 VDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFT 234
Query: 156 ALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKS 215
L+ C A L + G P+ I+ G SEA+ +++ M++
Sbjct: 235 ILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEE 294
Query: 216 DIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEA 275
++ D + YN ++ G+ DT T+ ++ G+C +G A
Sbjct: 295 GVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGA 354
Query: 276 EELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLI 333
LL ME GC PN C+YN +HGL + + + + ++MK G +++N L+
Sbjct: 355 LSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLV 412
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 118/262 (45%), Gaps = 36/262 (13%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQK------------------------- 40
G++P V+ + ++ L + GR E L+ E+ +K
Sbjct: 154 GLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVV 213
Query: 41 -----------GVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIG 89
V PD+ +F+IL+D + A ++ + + G +P+ YN+++
Sbjct: 214 YEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMK 273
Query: 90 GYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKP 149
G+C + EA+ V+ M G P +TYN+LI G K V+ A L MV+ G +P
Sbjct: 274 GFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEP 333
Query: 150 DVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLF 209
D T+T+L+ G C+ G+ L A L M+ G PN T +L GL K R + M L+
Sbjct: 334 DTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELY 393
Query: 210 RAMEKSDIDLDIVVYNVMLDGM 231
M+ S + L+ Y ++ +
Sbjct: 394 EMMKSSGVKLESNGYATLVRSL 415
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 90/169 (53%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G +P YN +++G + E G+ +M ++GV PD T++ L+ G K G V A
Sbjct: 260 GFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEA 319
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
R + MV G EP+ TY SL+ G C + + A+ + + M RGC P+ TYN+L+HG
Sbjct: 320 RMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHG 379
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELF 174
CK + +D+ + L M + G+K + + LV + GK A E+F
Sbjct: 380 LCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVF 428
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 1/268 (0%)
Query: 37 MMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQ 96
M+ G+ PD T I V + G V A+ +M + P+ TYN L+ C
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKD 209
Query: 97 MEEAMKVFDLMVRR-GCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWT 155
+ + D M P +V++ LI C K++ A+ L+ ++ N G KPD +
Sbjct: 210 LHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYN 269
Query: 156 ALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKS 215
++ GFC + K A ++ MKE G P+ T ++ GL K EA + M +
Sbjct: 270 TIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDA 329
Query: 216 DIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEA 275
+ D Y +++GMC + T+N ++ GLC L+D+
Sbjct: 330 GYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKG 389
Query: 276 EELLMRMEENGCPPNRCSYNVFVHGLLR 303
EL M+ +G Y V L++
Sbjct: 390 MELYEMMKSSGVKLESNGYATLVRSLVK 417
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 100/227 (44%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
M++ ++P +VS+ LI + +E L+ ++ G PD ++ ++ GF
Sbjct: 220 MRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLS 279
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
S A V M GVEP+ +TYN+LI G ++EEA MV G P TY
Sbjct: 280 KGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYT 339
Query: 121 SLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEH 180
SL++G C+ + A+ LL EM G P+ T+ L+ G C+ EL+ MK
Sbjct: 340 SLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSS 399
Query: 181 GQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVM 227
G ++ L K +EA +F S D Y+ +
Sbjct: 400 GVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTL 446
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 132/301 (43%), Gaps = 35/301 (11%)
Query: 17 LIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVG 76
LIQ K G + + +++ + +Q+ + L++ G + A+ +
Sbjct: 122 LIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMR 181
Query: 77 VEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAI 136
+ PN V++N LI G+ + E A KVFD M+ PSVVTYNSLI C+ D+ +A
Sbjct: 182 LRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAK 241
Query: 137 CLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGL 196
LL +M+ + ++P+ VT+ L+ G C G+ AK+L F M+ G P L +++ L
Sbjct: 242 SLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDL 301
Query: 197 FKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDT 256
K EA L M+K I D+V+YN
Sbjct: 302 GKRGRIDEAKLLLGEMKKRRIKPDVVIYN------------------------------- 330
Query: 257 YTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQI 316
I++ LC E + EA +L M+ GC PN +Y + + G R D L
Sbjct: 331 ----ILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNA 386
Query: 317 M 317
M
Sbjct: 387 M 387
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%)
Query: 7 IQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGAR 66
++P VS+N LI+G W+ + EM++ V P V T++ L+ + + A+
Sbjct: 182 LRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAK 241
Query: 67 CVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGW 126
++ M+ + PN VT+ L+ G C + + EA K+ M RGC P +V Y L+
Sbjct: 242 SLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDL 301
Query: 127 CKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNL 186
K +D A LLGEM +KPDVV + LV C + A + M+ G PN
Sbjct: 302 GKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNA 361
Query: 187 QTCTVILDGLFKCRFHSEAMSLFRAM 212
T +++DG + +++ AM
Sbjct: 362 ATYRMMIDGFCRIEDFDSGLNVLNAM 387
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 104/213 (48%), Gaps = 12/213 (5%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
K I+P V++ L++GL G + E L+++M +G P + + IL+ GK G +
Sbjct: 250 KRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDE 309
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A+ ++G M ++P+VV YN L+ C ++ EA +V M +GC P+ TY +I
Sbjct: 310 AKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMID 369
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGF---------CQVGKPLAAKELFF 175
G+C+++D D + +L M+ P T+ +V G C V + + K L F
Sbjct: 370 GFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSF 429
Query: 176 TMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSL 208
G NL + I DG C SE +S+
Sbjct: 430 G---SGAWQNLLSDLCIKDGGVYCEALSEVISI 459
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 117/267 (43%), Gaps = 2/267 (0%)
Query: 10 TIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVM 69
TI S N LI L G ++ + P+ +F+IL+ GF + A V
Sbjct: 150 TIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVF 209
Query: 70 GFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKV 129
M+ + V+P+VVTYNSLIG C M +A + + M+++ P+ VT+ L+ G C
Sbjct: 210 DEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCK 269
Query: 130 KDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTC 189
+ + A L+ +M G KP +V + L+ + G+ AK L MK+ P++
Sbjct: 270 GEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIY 329
Query: 190 TVILDGL-FKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXX 248
++++ L +CR EA + M+ + Y +M+DG C
Sbjct: 330 NILVNHLCTECRV-PEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAML 388
Query: 249 XXXXXFDTYTFNIMIRGLCWEGLLDEA 275
TF M+ GL G LD A
Sbjct: 389 ASRHCPTPATFVCMVAGLIKGGNLDHA 415
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 128/306 (41%)
Query: 28 KEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSL 87
+E L ++ + G D ++S L+ K ++ + + V + L
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGL 122
Query: 88 IGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGL 147
I Y +++A+ VF + C+ ++ + N+LI+ ++++A + L
Sbjct: 123 IQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRL 182
Query: 148 KPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMS 207
+P+ V++ L+ GF AA ++F M E P++ T ++ L + +A S
Sbjct: 183 RPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKS 242
Query: 208 LFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLC 267
L M K I + V + +++ G+C + I++ L
Sbjct: 243 LLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLG 302
Query: 268 WEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDAN 327
G +DEA+ LL M++ P+ YN+ V+ L + + + + L M+ KG +A
Sbjct: 303 KRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAA 362
Query: 328 TTELLI 333
T ++I
Sbjct: 363 TYRMMI 368
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 164/381 (43%), Gaps = 55/381 (14%)
Query: 8 QPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARC 67
+ + +++ +I + RW+E A L MM+ GV+PD F ++ G G V +
Sbjct: 143 ERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKV 202
Query: 68 VMGFMVHVGV-------------------------------EPNVVTYNSLIGGYCLRHQ 96
+ ++ +G+ E +V+ +NS++ YC +
Sbjct: 203 IHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGK 262
Query: 97 MEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTA 156
EEA+++ M + G P +VT+N LI G+ ++ D A+ L+ +M G+ DV TWTA
Sbjct: 263 HEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTA 322
Query: 157 LVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKC------RFHSEAMSLFR 210
++ G G A ++F M G VPN T I+ + C SE S+
Sbjct: 323 MISGLIHNGMRYQALDMFRKMFLAGVVPNAVT---IMSAVSACSCLKVINQGSEVHSI-- 377
Query: 211 AMEKSDIDLDIVVYNVMLD--GMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCW 268
A++ ID D++V N ++D C D YT+N MI G C
Sbjct: 378 AVKMGFID-DVLVGNSLVDMYSKCGKLEDARKVFDSVKNK------DVYTWNSMITGYCQ 430
Query: 269 EGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANT 328
G +A EL RM++ PN ++N + G ++ D + Q M+ G V NT
Sbjct: 431 AGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDG-KVQRNT 489
Query: 329 T--ELLICIYSAN-KGDNAFQ 346
L+I Y N K D A +
Sbjct: 490 ATWNLIIAGYIQNGKKDEALE 510
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 125/286 (43%), Gaps = 38/286 (13%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+GI P +V++N LI G + G+ L+ +M G+ DV T++ ++ G G+
Sbjct: 276 EGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQ 335
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A + M GV PN VT S + + + +V + V+ G + V+ NSL+
Sbjct: 336 ALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVD 395
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
+ K ++ A + + N+ DV TW +++ G+CQ G A ELF M++ P
Sbjct: 396 MYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRP 451
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
N+ T ++ G K EAM LF+ MEK DG
Sbjct: 452 NIITWNTMISGYIKNGDEGEAMDLFQRMEK--------------DGKVQR---------- 487
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPN 290
+T T+N++I G G DEA EL +M+ + PN
Sbjct: 488 ----------NTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPN 523
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 115/276 (41%), Gaps = 14/276 (5%)
Query: 15 NCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVH 74
+C+ G GR +L+ PDV + L+ + K G ++ AR V M
Sbjct: 90 SCIDSGSIHLGR------ILHARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMR- 142
Query: 75 VGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDR 134
E N+ T++++IG Y ++ E K+F LM++ G LP + ++ G DV+
Sbjct: 143 ---ERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEA 199
Query: 135 AICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILD 194
+ ++ G+ + +++ + + G+ A + F M+E + +L
Sbjct: 200 GKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVI----AWNSVLL 255
Query: 195 GLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXF 254
+ H EA+ L + MEK I +V +N+++ G
Sbjct: 256 AYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITA 315
Query: 255 DTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPN 290
D +T+ MI GL G+ +A ++ +M G PN
Sbjct: 316 DVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPN 351
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 32/215 (14%)
Query: 11 IVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMG 70
+ ++N +I G + G + L M + P++ T++ ++ G+ K G A +
Sbjct: 418 VYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQ 477
Query: 71 FMVHVG-VEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL------- 122
M G V+ N T+N +I GY + +EA+++F M +P+ VT SL
Sbjct: 478 RMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANL 537
Query: 123 --------IHGWCKVKDVDRAICLLGEMVNEGLKP----------------DVVTWTALV 158
IHG +++D + + + K D++TW +L+
Sbjct: 538 LGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLI 597
Query: 159 GGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVIL 193
GG+ G A LF MK G PN T + I+
Sbjct: 598 GGYVLHGSYGPALALFNQMKTQGITPNRGTLSSII 632
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 132/339 (38%), Gaps = 46/339 (13%)
Query: 15 NCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVH 74
N L+ K G+ ++ + + K DV T++ ++ G+ + G A + M
Sbjct: 391 NSLVDMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKAYELFTRMQD 446
Query: 75 VGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLP-SVVTYNSLIHGWCKVKDVD 133
+ PN++T+N++I GY EAM +F M + G + + T+N +I G+ + D
Sbjct: 447 ANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKD 506
Query: 134 RAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVIL 193
A+ L +M P+ VT +L+ + +E+ HG V L
Sbjct: 507 EALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREI------HGCVLRRN-----L 555
Query: 194 DGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXX 253
D + H+ +L KS DI + GM
Sbjct: 556 DAI-----HAVKNALTDTYAKSG---DIEYSRTIFLGM--------------------ET 587
Query: 254 FDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYN--VFVHGLLRKLDISRSE 311
D T+N +I G G A L +M+ G PNR + + + HGL+ +D +
Sbjct: 588 KDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKV 647
Query: 312 KYLQIMKCKGFPVDANTTELLICIYSANKGDNAFQELQQ 350
Y P + + ++ AN+ + A Q +Q+
Sbjct: 648 FYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQE 686
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 141/296 (47%), Gaps = 7/296 (2%)
Query: 11 IVSYNCLIQGLFKFGRWKEG--AGLLYEMMQKGVMPDVQTFSILVDGFGK-EGLVSGARC 67
+ + NCL+ L GR K G A +L++ +++ P++ T+++L++G+ + L+ AR
Sbjct: 263 VETINCLLDSL---GRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAAR- 318
Query: 68 VMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWC 127
+ M+ G++P++V +N ++ G + +A+K+F +M +G P+V +Y +I +C
Sbjct: 319 IWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFC 378
Query: 128 KVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQ 187
K ++ AI +MV+ GL+PD +T L+ GF K EL M+E G P+ +
Sbjct: 379 KQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGK 438
Query: 188 TCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXX 247
T ++ + + ++ M +++I+ I +N+++
Sbjct: 439 TYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEM 498
Query: 248 XXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLR 303
D ++ ++IRGL EG EA L M + G YN F R
Sbjct: 499 IKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHR 554
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 129/289 (44%), Gaps = 4/289 (1%)
Query: 12 VSYNCLIQGLFKFGRWKEGAGLLY--EMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVM 69
+S++ +++ L +F ++ A + ++G D +T++ ++ K V+
Sbjct: 158 LSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVL 217
Query: 70 GFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKV 129
M G+ + T+ + + + ++A+ +F+LM + V T N L+ +
Sbjct: 218 EEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRA 276
Query: 130 KDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTC 189
K + + +L + + E P+++T+T L+ G+C+V + A ++ M +HG P++
Sbjct: 277 K-LGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAH 335
Query: 190 TVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXX 249
V+L+GL + S+A+ LF M+ ++ Y +M+ C
Sbjct: 336 NVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVD 395
Query: 250 XXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFV 298
D + +I G + LD ELL M+E G PP+ +YN +
Sbjct: 396 SGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALI 444
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 103/220 (46%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G++P IV++N +++GL + + + L + M KG P+V++++I++ F K+ + A
Sbjct: 327 GLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETA 386
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
MV G++P+ Y LI G+ + +++ ++ M +G P TYN+LI
Sbjct: 387 IEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKL 446
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
K + + +M+ ++P + T+ ++ + + ++ M + G P+
Sbjct: 447 MANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPD 506
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYN 225
+ TV++ GL EA M + ++ YN
Sbjct: 507 DNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYN 546
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+QP Y CLI G + LL EM +KG PD +T++ L+ + +
Sbjct: 397 GLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHG 456
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ M+ +EP++ T+N ++ Y + E V+D M+++G P +Y LI G
Sbjct: 457 TRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRG 516
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
A L EM+++G+K ++ + F + G+P +EL K G+
Sbjct: 517 LISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGK 573
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
SKG P + SY +I+ K + +M+ G+ PD ++ L+ GFG + +
Sbjct: 359 KSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL 418
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
++ M G P+ TYN+LI + E ++++ M++ PS+ T+N +
Sbjct: 419 DTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMI 478
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAA 170
+ + ++ + + EM+ +G+ PD ++T L+ G GK A
Sbjct: 479 MKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREA 526
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 102/257 (39%), Gaps = 3/257 (1%)
Query: 93 LRHQMEEAMKVFDLMV-RRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDV 151
RH + A + F R+G TYNS++ K + + + +L EM +GL +
Sbjct: 170 FRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-M 228
Query: 152 VTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRA 211
T+T + F + A +F MK++ ++T +LD L + + EA LF
Sbjct: 229 ETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDK 288
Query: 212 MEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGL 271
+ K +++ Y V+L+G C D N+M+ GL
Sbjct: 289 L-KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMK 347
Query: 272 LDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTEL 331
+A +L M+ G PN SY + + ++ + + +Y M G DA
Sbjct: 348 KSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTC 407
Query: 332 LICIYSANKGDNAFQEL 348
LI + K + EL
Sbjct: 408 LITGFGTQKKLDTVYEL 424
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 141/296 (47%), Gaps = 7/296 (2%)
Query: 11 IVSYNCLIQGLFKFGRWKEG--AGLLYEMMQKGVMPDVQTFSILVDGFGK-EGLVSGARC 67
+ + NCL+ L GR K G A +L++ +++ P++ T+++L++G+ + L+ AR
Sbjct: 264 VETINCLLDSL---GRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAAR- 319
Query: 68 VMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWC 127
+ M+ G++P++V +N ++ G + +A+K+F +M +G P+V +Y +I +C
Sbjct: 320 IWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFC 379
Query: 128 KVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQ 187
K ++ AI +MV+ GL+PD +T L+ GF K EL M+E G P+ +
Sbjct: 380 KQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGK 439
Query: 188 TCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXX 247
T ++ + + ++ M +++I+ I +N+++
Sbjct: 440 TYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEM 499
Query: 248 XXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLR 303
D ++ ++IRGL EG EA L M + G YN F R
Sbjct: 500 IKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHR 555
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 103/220 (46%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G++P IV++N +++GL + + + L + M KG P+V++++I++ F K+ + A
Sbjct: 328 GLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETA 387
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
MV G++P+ Y LI G+ + +++ ++ M +G P TYN+LI
Sbjct: 388 IEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKL 447
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
K + + +M+ ++P + T+ ++ + + ++ M + G P+
Sbjct: 448 MANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPD 507
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYN 225
+ TV++ GL EA M + ++ YN
Sbjct: 508 DNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYN 547
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 98/216 (45%), Gaps = 1/216 (0%)
Query: 83 TYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEM 142
T+ + + + ++A+ +F+LM + V T N L+ + K + + +L +
Sbjct: 231 TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAK-LGKEAQVLFDK 289
Query: 143 VNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFH 202
+ E P+++T+T L+ G+C+V + A ++ M +HG P++ V+L+GL +
Sbjct: 290 LKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKK 349
Query: 203 SEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIM 262
S+A+ LF M+ ++ Y +M+ C D + +
Sbjct: 350 SDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 409
Query: 263 IRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFV 298
I G + LD ELL M+E G PP+ +YN +
Sbjct: 410 ITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALI 445
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+QP Y CLI G + LL EM +KG PD +T++ L+ + +
Sbjct: 398 GLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHG 457
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ M+ +EP++ T+N ++ Y + E V+D M+++G P +Y LI G
Sbjct: 458 TRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRG 517
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
A L EM+++G+K ++ + F + G+P +EL K G+
Sbjct: 518 LISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGK 574
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
SKG P + SY +I+ K + +M+ G+ PD ++ L+ GFG + +
Sbjct: 360 KSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL 419
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
++ M G P+ TYN+LI + E ++++ M++ PS+ T+N +
Sbjct: 420 DTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMI 479
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAA 170
+ + ++ + + EM+ +G+ PD ++T L+ G GK A
Sbjct: 480 MKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREA 527
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 103/257 (40%), Gaps = 3/257 (1%)
Query: 93 LRHQMEEAMKVFDLMV-RRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDV 151
RH + A + F R+G + TYNS++ K + + + +L EM +GL +
Sbjct: 171 FRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-M 229
Query: 152 VTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRA 211
T+T + F + A +F MK++ ++T +LD L + + EA LF
Sbjct: 230 ETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDK 289
Query: 212 MEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGL 271
+ K +++ Y V+L+G C D N+M+ GL
Sbjct: 290 L-KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMK 348
Query: 272 LDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTEL 331
+A +L M+ G PN SY + + ++ + + +Y M G DA
Sbjct: 349 KSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTC 408
Query: 332 LICIYSANKGDNAFQEL 348
LI + K + EL
Sbjct: 409 LITGFGTQKKLDTVYEL 425
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 112/215 (52%)
Query: 13 SYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFM 72
SY +++ L G+ E +L ++ +KGV+ D ++ + GK +S + M
Sbjct: 409 SYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKM 468
Query: 73 VHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDV 132
G P++ TYN LI + +++EA+ +F+ + R C P +++YNSLI+ K DV
Sbjct: 469 KKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDV 528
Query: 133 DRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVI 192
D A EM +GL PDVVT++ L+ F + + A LF M G PN+ T ++
Sbjct: 529 DEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNIL 588
Query: 193 LDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVM 227
LD L K +EA+ L+ M++ + D + Y V+
Sbjct: 589 LDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 99/190 (52%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
+ KG+ + YN + L K + L +M + G PD+ T++IL+ FG+ G V
Sbjct: 434 HEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEV 493
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
A + + +P++++YNSLI ++EA F M +G P VVTY++L
Sbjct: 494 DEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTL 553
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
+ + K + V+ A L EM+ +G +P++VT+ L+ + G+ A +L+ MK+ G
Sbjct: 554 MECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGL 613
Query: 183 VPNLQTCTVI 192
P+ T TV+
Sbjct: 614 TPDSITYTVL 623
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 99/216 (45%)
Query: 14 YNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMV 73
Y+ L++ L K G E L +M V + ++ +++ G A ++ +
Sbjct: 375 YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIH 434
Query: 74 HVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVD 133
GV + + YN++ Q+ +F+ M + G P + TYN LI + +V +VD
Sbjct: 435 EKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVD 494
Query: 134 RAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVIL 193
AI + E+ KPD++++ +L+ + G A F M+E G P++ T + ++
Sbjct: 495 EAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLM 554
Query: 194 DGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLD 229
+ K A SLF M +IV YN++LD
Sbjct: 555 ECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLD 590
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 147/379 (38%), Gaps = 73/379 (19%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQK-GVMPDVQTFSILVDGFGKEGLVSG 64
G + I +YN L+ L K E A ++E M+K D T++I++ G+ G
Sbjct: 233 GHKLDIFAYNMLLDALAK----DEKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDE 288
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVT------ 118
A + M+ G+ NVV YN+L+ +++A++VF MV GC P+ T
Sbjct: 289 AVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLN 348
Query: 119 --------------------------YNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVV 152
Y+ L+ K+ V A L +M + +K +
Sbjct: 349 LLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERD 408
Query: 153 TWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAM 212
++ +++ C GK + A E+ + E G V + + L K + S LF M
Sbjct: 409 SYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKM 468
Query: 213 EKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLL 272
+K DI +T+NI+I G +
Sbjct: 469 KKDGPSPDI-----------------------------------FTYNILIASFGRVGEV 493
Query: 273 DEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANT-TEL 331
DEA + +E + C P+ SYN ++ L + D+ + + M+ KG D T + L
Sbjct: 494 DEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTL 553
Query: 332 LICIYSANKGDNAFQELQQ 350
+ C + + A+ ++
Sbjct: 554 MECFGKTERVEMAYSLFEE 572
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 134/326 (41%), Gaps = 32/326 (9%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSIL----------- 52
++G+ +V YN L+Q L K + + M++ G P+ T+S+L
Sbjct: 298 TEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLV 357
Query: 53 -VDG--------------------FGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGY 91
+DG K G VS A + M V+ +Y S++
Sbjct: 358 RLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESL 417
Query: 92 CLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDV 151
C + EA+++ + +G + + YN++ K+K + L +M +G PD+
Sbjct: 418 CGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDI 477
Query: 152 VTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRA 211
T+ L+ F +VG+ A +F ++ P++ + +++ L K EA F+
Sbjct: 478 FTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKE 537
Query: 212 MEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGL 271
M++ ++ D+V Y+ +++ + T+NI++ L G
Sbjct: 538 MQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGR 597
Query: 272 LDEAEELLMRMEENGCPPNRCSYNVF 297
EA +L +M++ G P+ +Y V
Sbjct: 598 TAEAVDLYSKMKQQGLTPDSITYTVL 623
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 145/335 (43%), Gaps = 4/335 (1%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
QP ++ +N LI + ++KE L ++++ +P T+++L+ + GL+ A
Sbjct: 172 SFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERA 231
Query: 66 RCVMGFMVHVGVEPN---VVTYNSLIGGYCLRH-QMEEAMKVFDLMVRRGCLPSVVTYNS 121
V+ M + V P V YN+ I G R EEA+ VF M R C P+ TYN
Sbjct: 232 EVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNL 291
Query: 122 LIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHG 181
+I+ + K + L EM + KP++ T+TALV F + G A+E+F ++E G
Sbjct: 292 MINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDG 351
Query: 182 QVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXX 241
P++ +++ + + A +F M+ + D YN+M+D
Sbjct: 352 LEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAE 411
Query: 242 XXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGL 301
+ +++ + + E ++ M ENG P+ N ++
Sbjct: 412 AVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLY 471
Query: 302 LRKLDISRSEKYLQIMKCKGFPVDANTTELLICIY 336
R ++ EK L M+ D +T +LI IY
Sbjct: 472 GRLGQFTKMEKILAEMENGPCTADISTYNILINIY 506
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 106/218 (48%)
Query: 8 QPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARC 67
+P I +Y L+ + G ++ + ++ + G+ PDV ++ L++ + + G GA
Sbjct: 318 KPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAE 377
Query: 68 VMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWC 127
+ M H+G EP+ +YN ++ Y +A VF+ M R G P++ ++ L+ +
Sbjct: 378 IFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYS 437
Query: 128 KVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQ 187
K +DV + ++ EM G++PD +++ + ++G+ +++ M+ ++
Sbjct: 438 KARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADIS 497
Query: 188 TCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYN 225
T ++++ K F LF +++ + D+V +
Sbjct: 498 TYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWT 535
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 126/304 (41%), Gaps = 4/304 (1%)
Query: 37 MMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQ 96
+ + PDV F++L+D +G++ A + ++ P TY LI YC+
Sbjct: 168 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 227
Query: 97 MEEAMKVFDLMVRRGCLPS---VVTYNSLIHGWCKVK-DVDRAICLLGEMVNEGLKPDVV 152
+E A V M P V YN+ I G K K + + AI + M + KP
Sbjct: 228 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 287
Query: 153 TWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAM 212
T+ ++ + + K + +L+ M+ H PN+ T T +++ + +A +F +
Sbjct: 288 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 347
Query: 213 EKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLL 272
++ ++ D+ VYN +++ D ++NIM+ GL
Sbjct: 348 QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 407
Query: 273 DEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELL 332
+AE + M+ G P S+ + + + D+++ E ++ M G D +
Sbjct: 408 SDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSM 467
Query: 333 ICIY 336
+ +Y
Sbjct: 468 LNLY 471
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G +P SYN ++ + G + + EM + G+ P +++ +L+ + K V+
Sbjct: 386 GCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKC 445
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ M GVEP+ NS++ Y Q + K+ M C + TYN LI+
Sbjct: 446 EAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINI 505
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+ K ++R L E+ + +PDVVTWT+ +G + + + E+F M + G P+
Sbjct: 506 YGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPD 565
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEK 214
T V+L + S+ R M K
Sbjct: 566 GGTAKVLLSACSSEEQVEQVTSVLRTMHK 594
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 107/267 (40%), Gaps = 4/267 (1%)
Query: 78 EPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAIC 137
+P+V+ +N LI Y + Q +EA ++ ++ +P+ TY LI +C ++RA
Sbjct: 174 QPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEV 233
Query: 138 LLGEMVNEGLKPD---VVTWTALVGGFCQ-VGKPLAAKELFFTMKEHGQVPNLQTCTVIL 193
+L EM N + P V + A + G + G A ++F MK P +T +++
Sbjct: 234 VLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMI 293
Query: 194 DGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXX 253
+ K + L+ M +I Y +++
Sbjct: 294 NLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLE 353
Query: 254 FDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKY 313
D Y +N ++ G A E+ M+ GC P+R SYN+ V R S +E
Sbjct: 354 PDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAV 413
Query: 314 LQIMKCKGFPVDANTTELLICIYSANK 340
+ MK G + LL+ YS +
Sbjct: 414 FEEMKRLGIAPTMKSHMLLLSAYSKAR 440
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 65/140 (46%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
+ G++P N ++ + G++ + +L EM D+ T++IL++ +GK G +
Sbjct: 453 SENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFL 512
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
+ + P+VVT+ S IG Y + + ++VF+ M+ GC P T L
Sbjct: 513 ERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVL 572
Query: 123 IHGWCKVKDVDRAICLLGEM 142
+ + V++ +L M
Sbjct: 573 LSACSSEEQVEQVTSVLRTM 592
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 154/374 (41%), Gaps = 39/374 (10%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
QP ++ +N LI + ++KE L ++++ +P T+++L+ + GL+ A
Sbjct: 150 SFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERA 209
Query: 66 RCVMGFMVHVGVEPN---VVTYNSLIGGYCLRH-QMEEAMKVFDLMVRRGCLPSVVTYNS 121
V+ M + V P V YN+ I G R EEA+ VF M R C P+ TYN
Sbjct: 210 EVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNL 269
Query: 122 LIH----------GW---CKVKD--VDRAICLLGEMVN--------------------EG 146
+I+ W C+++ IC +VN +G
Sbjct: 270 MINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDG 329
Query: 147 LKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAM 206
L+PDV + AL+ + + G P A E+F M+ G P+ + +++D + HS+A
Sbjct: 330 LEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAE 389
Query: 207 SLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGL 266
++F M++ I + + ++L DT+ N M+
Sbjct: 390 AVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLY 449
Query: 267 CWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDA 326
G + E++L ME C + +YN+ ++ + + R E+ +K K F D
Sbjct: 450 GRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDV 509
Query: 327 NTTELLICIYSANK 340
T I YS K
Sbjct: 510 VTWTSRIGAYSRKK 523
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 126/304 (41%), Gaps = 4/304 (1%)
Query: 37 MMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQ 96
+ + PDV F++L+D +G++ A + ++ P TY LI YC+
Sbjct: 146 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 205
Query: 97 MEEAMKVFDLMVRRGCLPS---VVTYNSLIHGWCKVK-DVDRAICLLGEMVNEGLKPDVV 152
+E A V M P V YN+ I G K K + + AI + M + KP
Sbjct: 206 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 265
Query: 153 TWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAM 212
T+ ++ + + K + +L+ M+ H PN+ T T +++ + +A +F +
Sbjct: 266 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 325
Query: 213 EKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLL 272
++ ++ D+ VYN +++ D ++NIM+ GL
Sbjct: 326 QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 385
Query: 273 DEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELL 332
+AE + M+ G P S+ + + + D+++ E ++ M G D +
Sbjct: 386 SDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSM 445
Query: 333 ICIY 336
+ +Y
Sbjct: 446 LNLY 449
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G +P SYN ++ + G + + EM + G+ P +++ +L+ + K V+
Sbjct: 364 GCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKC 423
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ M GVEP+ NS++ Y Q + K+ M C + TYN LI+
Sbjct: 424 EAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINI 483
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+ K ++R L E+ + +PDVVTWT+ +G + + + E+F M + G P+
Sbjct: 484 YGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPD 543
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEK 214
T V+L + S+ R M K
Sbjct: 544 GGTAKVLLSACSSEEQVEQVTSVLRTMHK 572
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 65/140 (46%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
+ G++P N ++ + G++ + +L EM D+ T++IL++ +GK G +
Sbjct: 431 SENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFL 490
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
+ + P+VVT+ S IG Y + + ++VF+ M+ GC P T L
Sbjct: 491 ERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVL 550
Query: 123 IHGWCKVKDVDRAICLLGEM 142
+ + V++ +L M
Sbjct: 551 LSACSSEEQVEQVTSVLRTM 570
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 90/181 (49%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G P + +YN L+ L + LL M + GV P V F+ L+DG + G +
Sbjct: 287 GFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEAC 346
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ M V VG P+VV Y +I GY ++E+A ++F M +G LP+V TYNS+I G
Sbjct: 347 KYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRG 406
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+C A LL EM + G P+ V ++ LV GK L A E+ M E G +
Sbjct: 407 FCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVH 466
Query: 186 L 186
L
Sbjct: 467 L 467
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 138/323 (42%), Gaps = 6/323 (1%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+ + T Y+ L++ + G +K L+ EM++ G TF++L+ G+ GL
Sbjct: 146 ENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGL--- 202
Query: 65 ARCVMGFMVH---VGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNS 121
AR V+ + P +YN+++ Q + V++ M+ G P V+TYN
Sbjct: 203 ARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNI 262
Query: 122 LIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHG 181
++ ++ DR LL EMV +G PD+ T+ L+ KPLAA L M+E G
Sbjct: 263 VMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVG 322
Query: 182 QVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXX 241
P + T ++DGL + K D+V Y VM+ G
Sbjct: 323 VEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAE 382
Query: 242 XXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGL 301
+ +T+N MIRG C G EA LL ME GC PN Y+ V+ L
Sbjct: 383 EMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNL 442
Query: 302 LRKLDISRSEKYLQIMKCKGFPV 324
+ + + ++ M KG V
Sbjct: 443 KNAGKVLEAHEVVKDMVEKGHYV 465
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 141/333 (42%), Gaps = 2/333 (0%)
Query: 6 GIQPTIVSYNCLIQGLFKFGR-WKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+ P V+ LI L K GR KE + +M +KGV F LV F EGL
Sbjct: 303 NVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEE 362
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A + M G+ N + YN+L+ Y + +EE +F M +G PS TYN L+
Sbjct: 363 ALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMD 422
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGK-PLAAKELFFTMKEHGQV 183
+ + D LL EM + GL+P+V ++T L+ + + K A + F MK+ G
Sbjct: 423 AYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLK 482
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXX 243
P+ + T ++ +H +A + F M K I + Y +LD
Sbjct: 483 PSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEI 542
Query: 244 XXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLR 303
T+N ++ G +GL EA +++ + G P+ +YN+ ++ R
Sbjct: 543 WKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYAR 602
Query: 304 KLDISRSEKYLQIMKCKGFPVDANTTELLICIY 336
++ + L+ M D+ T +I +
Sbjct: 603 GGQDAKLPQLLKEMAALNLKPDSITYSTMIYAF 635
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 135/332 (40%), Gaps = 36/332 (10%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KGI+ + YN L+ K +E GL EM KG+ P T++IL+D + +
Sbjct: 373 KGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDI 432
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEE-AMKVFDLMVRRGCLPSVVTYNSLI 123
++ M +G+EPNV +Y LI Y +M + A F M + G PS +Y +LI
Sbjct: 433 VETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALI 492
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
H + ++A EM EG+KP V T+T+++ F + G E++ M
Sbjct: 493 HAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIK 552
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXX 243
T +LDG K + EA + K + ++ YN+++
Sbjct: 553 GTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLM--------------- 597
Query: 244 XXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLR 303
N RG G + +LL M P+ +Y+ ++ +R
Sbjct: 598 ----------------NAYARG----GQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVR 637
Query: 304 KLDISRSEKYLQIMKCKGFPVDANTTELLICI 335
D R+ Y ++M G D + E L I
Sbjct: 638 VRDFKRAFFYHKMMVKSGQVPDPRSYEKLRAI 669
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 134/317 (42%), Gaps = 1/317 (0%)
Query: 19 QGLFKFGRWKEGAGLLYEM-MQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGV 77
Q L + + G Y + Q G D T++ +V G+ ++ MV G
Sbjct: 331 QVLKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGC 390
Query: 78 EPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAIC 137
+PN VTYN LI Y + ++EAM VF+ M GC P VTY +LI K +D A+
Sbjct: 391 KPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMD 450
Query: 138 LLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLF 197
+ M GL PD T++ ++ + G AA LF M G PNL T +++
Sbjct: 451 MYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHA 510
Query: 198 KCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTY 257
K R + A+ L+R M+ + D V Y+++++ + D
Sbjct: 511 KARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEP 570
Query: 258 TFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIM 317
+ +++ G +D+A + M + G PN + N + LR +S + LQ M
Sbjct: 571 VYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSM 630
Query: 318 KCKGFPVDANTTELLIC 334
G T LL+
Sbjct: 631 LALGLHPSLQTYTLLLS 647
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 107/223 (47%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G +P V+YN LI + KE + +M + G PD T+ L+D K G + A
Sbjct: 389 GCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIA 448
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ M G+ P+ TY+ +I + A ++F MV +GC P++VT+N +I
Sbjct: 449 MDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIAL 508
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
K ++ + A+ L +M N G +PD VT++ ++ G A+ +F M+ VP+
Sbjct: 509 HAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPD 568
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVML 228
+++D K +A ++AM ++ + ++ N +L
Sbjct: 569 EPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLL 611
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 111/229 (48%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
+K G + +Y ++ L + ++ E LL EM++ G P+ T++ L+ +G+
Sbjct: 349 LKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRAN 408
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
+ A V M G EP+ VTY +LI + ++ AM ++ M G P TY+
Sbjct: 409 YLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYS 468
Query: 121 SLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEH 180
+I+ K + A L EMV +G P++VT+ ++ + A +L+ M+
Sbjct: 469 VIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNA 528
Query: 181 GQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLD 229
G P+ T +++++ L C F EA +F M++ + D VY +++D
Sbjct: 529 GFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVD 577
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 67/123 (54%), Gaps = 1/123 (0%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
M+N+ G QP V+Y+ +++ L G +E G+ EM +K +PD + +LVD +GK G
Sbjct: 525 MQNA-GFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAG 583
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
V A M+ G+ PNV T NSL+ + H+M EA + M+ G PS+ TY
Sbjct: 584 NVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYT 643
Query: 121 SLI 123
L+
Sbjct: 644 LLL 646
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 74/154 (48%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G P +V++N +I K ++ L +M G PD T+SI+++ G G +
Sbjct: 493 QGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEE 552
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A V M P+ Y L+ + +++A + + M++ G P+V T NSL+
Sbjct: 553 AEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLS 612
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALV 158
+ +V + A LL M+ GL P + T+T L+
Sbjct: 613 TFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 646
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 140/323 (43%), Gaps = 1/323 (0%)
Query: 14 YNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMV 73
YN +I K ++ L+ M + V ++TF+IL+ + + GL S A M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 74 HVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVD 133
G P+ + ++ +I + + EA FD + R P V+ Y +L+ GWC+ ++
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEIS 272
Query: 134 RAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVIL 193
A + EM G++P+V T++ ++ C+ G+ A ++F M + G PN T ++
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLM 332
Query: 194 DGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXX 253
K + + ++ M+K + D + YN +++ C
Sbjct: 333 RVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCE 392
Query: 254 FDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKY 313
+ TFN + R + + ++ A + +M E C PN +YN+ + + K
Sbjct: 393 VNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKM 452
Query: 314 LQIMKCKGFPVDANTTELLICIY 336
+ M K + NT LL+ ++
Sbjct: 453 KKEMDDKEVEPNVNTYRLLVTMF 475
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 138/318 (43%), Gaps = 2/318 (0%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G P ++++ +I L + R E ++ ++ PDV ++ LV G+ + G +S A
Sbjct: 216 GCVPDKIAFSIVISNLSRKRRASEAQSF-FDSLKDRFEPDVIVYTNLVRGWCRAGEISEA 274
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
V M G+EPNV TY+ +I C Q+ A VF M+ GC P+ +T+N+L+
Sbjct: 275 EKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRV 334
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
K ++ + + +M G +PD +T+ L+ C+ A ++ TM + N
Sbjct: 335 HVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVN 394
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
T I + K R + A ++ M ++ + + V YN+++
Sbjct: 395 ASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKK 454
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGC-PPNRCSYNVFVHGLLRK 304
+ T+ +++ C G + A +L M E C P+ Y + + L R
Sbjct: 455 EMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRA 514
Query: 305 LDISRSEKYLQIMKCKGF 322
+ + E+ ++ M KG
Sbjct: 515 GQLKKHEELVEKMIQKGL 532
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 128/281 (45%), Gaps = 1/281 (0%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G +P + CL+ L K G K+ A L +E M+ +++ F+ L+ G+ + G + A
Sbjct: 213 GFEPDEYVFGCLLDALCKHGSVKDAAKL-FEDMRMRFPVNLRYFTSLLYGWCRVGKMMEA 271
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ V+ M G EP++V Y +L+ GY +M +A + M RRG P+ Y LI
Sbjct: 272 KYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQA 331
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
CKV ++ A+ + EM + DVVT+TALV GFC+ GK + M + G +P+
Sbjct: 332 LCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPS 391
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
T I+ K E + L M + + DI +YNV++ C
Sbjct: 392 ELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWN 451
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENG 286
TF IMI GL +G L EA + M G
Sbjct: 452 EMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRG 492
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 113/225 (50%), Gaps = 4/225 (1%)
Query: 10 TIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGV-MPDVQTFSILVDGFGKEGLVSGARCV 68
+I Y +++ L K ++ GL+ EM ++ + + + F +LV F +V A V
Sbjct: 146 SIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEV 205
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTY-NSLIHGWC 127
+ M G EP+ + L+ C +++A K+F+ M R P + Y SL++GWC
Sbjct: 206 LDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR--FPVNLRYFTSLLYGWC 263
Query: 128 KVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQ 187
+V + A +L +M G +PD+V +T L+ G+ GK A +L M+ G PN
Sbjct: 264 RVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNAN 323
Query: 188 TCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMC 232
TV++ L K EAM +F ME+ + + D+V Y ++ G C
Sbjct: 324 CYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFC 368
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 99/194 (51%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
N G +P IV Y L+ G G+ + LL +M ++G P+ +++L+ K +
Sbjct: 279 NEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRM 338
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
A V M E +VVTY +L+ G+C ++++ V D M+++G +PS +TY +
Sbjct: 339 EEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHI 398
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
+ K + + + L+ +M PD+ + ++ C++G+ A L+ M+E+G
Sbjct: 399 MVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGL 458
Query: 183 VPNLQTCTVILDGL 196
P + T ++++GL
Sbjct: 459 SPGVDTFVIMINGL 472
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 92/196 (46%), Gaps = 2/196 (1%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G +P Y LIQ L K R +E + EM + DV T++ LV GF K G +
Sbjct: 316 RGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDK 375
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
V+ M+ G+ P+ +TY ++ + + EE +++ + M + P + YN +I
Sbjct: 376 CYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIR 435
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHG--Q 182
CK+ +V A+ L EM GL P V T+ ++ G G L A + F M G
Sbjct: 436 LACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFS 495
Query: 183 VPNLQTCTVILDGLFK 198
V T ++L+ + K
Sbjct: 496 VSQYGTLKLLLNTVLK 511
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 92/227 (40%), Gaps = 6/227 (2%)
Query: 122 LIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHG 181
L+ + V +AI +L EM G +PD + L+ C+ G A +LF M+
Sbjct: 189 LVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRF 248
Query: 182 QVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXX 241
V NL+ T +L G + EA + M ++ + DIV Y +L G
Sbjct: 249 PV-NLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAY 307
Query: 242 XXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGL 301
+ + ++I+ LC ++EA ++ + ME C + +Y V G
Sbjct: 308 DLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGF 367
Query: 302 LRKLDISRSEKYLQIMKCKGF-PVDANTTELLICIYSANKGDNAFQE 347
+ I + L M KG P + +++ A++ +F+E
Sbjct: 368 CKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMV----AHEKKESFEE 410
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 152/347 (43%), Gaps = 9/347 (2%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
GI ++ ++ L+ G F+ G ++ L +M+Q G P++ T++ L+ GF G+V A
Sbjct: 242 GISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEA 301
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
V+ + G+ P++V N +I Y + EEA KVF + +R +P T+ S++
Sbjct: 302 FTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSS 361
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPD--VVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
C D L + G+ D +VT L F ++G A ++ M
Sbjct: 362 LCLSGKFD-----LVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFA 416
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXX 243
+ T TV L L + A+ +++ + K LD ++ ++D +
Sbjct: 417 LDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHL 476
Query: 244 XXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLR 303
D ++ + I+GL ++EA L M+E G PNR +Y + GL +
Sbjct: 477 FKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCK 536
Query: 304 KLDISRSEKYLQIMKCKGFPVDANTTELLICIYSANKGDNAFQELQQ 350
+ + + K L+ +G +D NT + + S +GD F E +
Sbjct: 537 EKETEKVRKILRECIQEGVELDPNTKFQVYSLLSRYRGD--FSEFRS 581
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 90/188 (47%), Gaps = 3/188 (1%)
Query: 48 TFSILVDGF---GKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVF 104
+F I + F G G + G + V+ M+ G PN + ++ C + EA +V
Sbjct: 176 SFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVV 235
Query: 105 DLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQV 164
LM+ G SV ++ L+ G+ + + +A+ L +M+ G P++VT+T+L+ GF +
Sbjct: 236 GLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDL 295
Query: 165 GKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVY 224
G A + ++ G P++ C +++ + EA +F ++EK + D +
Sbjct: 296 GMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTF 355
Query: 225 NVMLDGMC 232
+L +C
Sbjct: 356 ASILSSLC 363
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 100/250 (40%), Gaps = 32/250 (12%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFS------------ 50
S+G+ P IV N +I + GR++E + + ++ ++PD TF+
Sbjct: 309 QSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKF 368
Query: 51 --------------------ILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGG 90
+L + F K G S A V+ M + + TY +
Sbjct: 369 DLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSA 428
Query: 91 YCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPD 150
C A+K++ ++++ ++++I ++ + A+ L + E D
Sbjct: 429 LCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLD 488
Query: 151 VVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFR 210
VV++T + G + + A L MKE G PN +T I+ GL K + + + R
Sbjct: 489 VVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILR 548
Query: 211 AMEKSDIDLD 220
+ ++LD
Sbjct: 549 ECIQEGVELD 558
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 127/285 (44%), Gaps = 10/285 (3%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
+ GI + +Y L++GL R +G LL M GV P+ ++ L+ K G V
Sbjct: 175 ASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVG 234
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
AR +M M EPN VT+N LI YC ++ ++M + + G +P VVT ++
Sbjct: 235 RARSLMSEMK----EPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVM 290
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
C V A+ +L + ++G K DVV LV G+C +GK A+ F M+ G +
Sbjct: 291 EVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYL 350
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMC----XXXXXXX 239
PN++T +++ G A+ F M+ I + +N ++ G+
Sbjct: 351 PNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKI 410
Query: 240 XXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEE 284
D Y N +I G E ++A E L++ME+
Sbjct: 411 LEMMQDSDTVHGARIDPY--NCVIYGFYKENRWEDALEFLLKMEK 453
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 135/301 (44%), Gaps = 4/301 (1%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
M +S G+ P + +I+G + K ++ + + G+ P ++ F+ ++D KE
Sbjct: 102 MPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKED 161
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
+ M+ G+ +V TY L+ G L +++ + K+ +M G P+ V YN
Sbjct: 162 IDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYN 221
Query: 121 SLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEH 180
+L+H CK V RA L+ EM +P+ VT+ L+ +C K + + L
Sbjct: 222 TLLHALCKNGKVGRARSLMSEMK----EPNDVTFNILISAYCNEQKLIQSMVLLEKCFSL 277
Query: 181 GQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXX 240
G VP++ T T +++ L SEA+ + +E +D+V N ++ G C
Sbjct: 278 GFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVA 337
Query: 241 XXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHG 300
+ T+N++I G C G+LD A + M+ + N ++N + G
Sbjct: 338 QRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRG 397
Query: 301 L 301
L
Sbjct: 398 L 398
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 89/186 (47%), Gaps = 3/186 (1%)
Query: 1 MKNSKGIQ-PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKE 59
M++S + I YNC+I G +K RW++ L +M + + P S + ++
Sbjct: 414 MQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKM--EKLFPRAVDRSFKLISLCEK 471
Query: 60 GLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTY 119
G + + M+ G P+++ + LI Y ++EE++++ + MV RG LP T+
Sbjct: 472 GGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTF 531
Query: 120 NSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKE 179
N++I G+CK V I + +M G PD ++ L+ C G A LF M E
Sbjct: 532 NAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVE 591
Query: 180 HGQVPN 185
VP+
Sbjct: 592 KSIVPD 597
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 124/326 (38%), Gaps = 42/326 (12%)
Query: 13 SYNCLIQGLFKFGRWKEGAGLLYEMMQK-GVMPDVQTFSILVDGFGKEGLVSGARCVMGF 71
+Y L L F R+ LL EM G+ PD F ++ GFG+ L+ V+
Sbjct: 78 TYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDL 137
Query: 72 MVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDL-MVRRGCLPSVVTYNSLIHGWCKVK 130
+ G++P++ +NS++ ++ ++ A + F M+ G V TY L+ G
Sbjct: 138 VSKFGIKPSLKVFNSILD-VLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTN 196
Query: 131 DVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCT 190
+ LL M G+ P+ V + L+ C+ GK A+ L MKE PN
Sbjct: 197 RIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PN----- 247
Query: 191 VILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXX 250
V +N+++ C
Sbjct: 248 ------------------------------DVTFNILISAYCNEQKLIQSMVLLEKCFSL 277
Query: 251 XXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRS 310
D T ++ LC EG + EA E+L R+E G + + N V G + +
Sbjct: 278 GFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVA 337
Query: 311 EKYLQIMKCKGFPVDANTTELLICIY 336
+++ M+ KG+ + T LLI Y
Sbjct: 338 QRFFIEMERKGYLPNVETYNLLIAGY 363
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 104/218 (47%), Gaps = 9/218 (4%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVM---PDVQTFSILVDGFGKE 59
+ I+ ++N LI+GL GR +G +L EMMQ + ++ ++ GF KE
Sbjct: 380 KTDAIRWNFATFNTLIRGLSIGGRTDDGLKIL-EMMQDSDTVHGARIDPYNCVIYGFYKE 438
Query: 60 GLVSGARCVMGFMVHV-GVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVT 118
A + F++ + + P V + + C + M++ +D M+ G +PS++
Sbjct: 439 NRWEDA---LEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIV 495
Query: 119 YNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMK 178
+ LIH + + ++ ++ L+ +MV G P T+ A++ GFC+ K + + M
Sbjct: 496 SHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMA 555
Query: 179 EHGQVPNLQTCTVILDGL-FKCRFHSEAMSLFRAMEKS 215
E G VP+ ++ +L+ L K + R +EKS
Sbjct: 556 ERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKS 593
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 63/119 (52%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G P+I+ +CLI + G+ +E L+ +M+ +G +P TF+ ++ GF K+ V
Sbjct: 487 EGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMN 546
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
+ M G P+ +YN L+ C++ +++A +F MV + +P ++SL+
Sbjct: 547 GIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLM 605
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 80/209 (38%), Gaps = 36/209 (17%)
Query: 111 GCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNE-GLKPDVVTWTALVGGFCQVGKPLA 169
G + S TY +L H C + D LL EM + GL PD + ++ GF +
Sbjct: 71 GFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKR 130
Query: 170 AKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLD 229
+ + + G P+L+ ILD L K E DI + +M
Sbjct: 131 VISVVDLVSKFGIKPSLKVFNSILDVLVK--------------EDIDIAREFFTRKMMAS 176
Query: 230 GMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPP 289
G+ D YT+ I+++GL + + +LL M+ +G P
Sbjct: 177 GIHG---------------------DVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAP 215
Query: 290 NRCSYNVFVHGLLRKLDISRSEKYLQIMK 318
N YN +H L + + R+ + MK
Sbjct: 216 NAVVYNTLLHALCKNGKVGRARSLMSEMK 244
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 102/196 (52%), Gaps = 2/196 (1%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+ P SYN L+Q L +M+++ V+PDV ++ IL+ GF ++G V+GA
Sbjct: 185 GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGA 244
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ M++ G P+ ++Y +L+ C + Q+ EA K+ M +GC P +V YN++I G
Sbjct: 245 MELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILG 304
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+C+ A +L +M++ G P+ V++ L+GG C G K+ M G P+
Sbjct: 305 FCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPH 364
Query: 186 LQTCTVILDGLFKCRF 201
++ G C F
Sbjct: 365 FSVSNCLVKGF--CSF 378
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 98/189 (51%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+ + P + SY LIQG + G+ LL +M+ KG +PD +++ L++ ++ +
Sbjct: 219 RDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLRE 278
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A ++ M G P++V YN++I G+C + +A KV D M+ GC P+ V+Y +LI
Sbjct: 279 AYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIG 338
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G C D L EM+++G P LV GFC GK A ++ + ++G+
Sbjct: 339 GLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETL 398
Query: 185 NLQTCTVIL 193
+ T +++
Sbjct: 399 HSDTWEMVI 407
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 124/288 (43%), Gaps = 1/288 (0%)
Query: 47 QTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGY-CLRHQMEEAMKVFD 105
+ F+ L+ + + L M+ P N ++ R +++A ++F
Sbjct: 120 EIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFK 179
Query: 106 LMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVG 165
G +P+ +YN L+ +C D+ A L G+M+ + PDV ++ L+ GFC+ G
Sbjct: 180 SSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKG 239
Query: 166 KPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYN 225
+ A EL M G VP+ + T +L+ L + EA L M+ + D+V YN
Sbjct: 240 QVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYN 299
Query: 226 VMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEEN 285
M+ G C ++ ++ +I GLC +G+ DE ++ L M
Sbjct: 300 TMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISK 359
Query: 286 GCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLI 333
G P+ N V G + + ++++ G + ++T E++I
Sbjct: 360 GFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVI 407
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 77/159 (48%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
+KG P +SY L+ L + + +E LL M KG PD+ ++ ++ GF +E
Sbjct: 253 NKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAM 312
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
AR V+ M+ G PN V+Y +LIGG C + +E K + M+ +G P N L+
Sbjct: 313 DARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLV 372
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFC 162
G+C V+ A ++ ++ G TW ++ C
Sbjct: 373 KGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLIC 411
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 68/147 (46%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KG P +V YN +I G + R + +L +M+ G P+ ++ L+ G +G+
Sbjct: 289 KGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDE 348
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
+ + M+ G P+ N L+ G+C ++EEA V +++++ G T+ +I
Sbjct: 349 GKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIP 408
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDV 151
C + ++ L + V E + D
Sbjct: 409 LICNEDESEKIKLFLEDAVKEEITGDT 435
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 109/228 (47%), Gaps = 3/228 (1%)
Query: 7 IQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGAR 66
++P ++N L G + K+ LL EM++ G P+ T+ +D F + G+V A
Sbjct: 264 VKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAA 323
Query: 67 CVMGFMVHVGVE---PNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
+ FM+ G P T+ +I + EE ++ M+ GCLP V TY +I
Sbjct: 324 DLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVI 383
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
G C + VD A L EM N+G PD+VT+ + C+ K A +L+ M E
Sbjct: 384 EGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCA 443
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGM 231
P++QT +++ F+ A + + M+K D D+ Y M++G+
Sbjct: 444 PSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGL 491
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 103/226 (45%), Gaps = 3/226 (1%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVM---PDVQTFSILVDGFGKEGLV 62
G +P +Y I + G E A L M+ KG P +TF++++ K
Sbjct: 298 GHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKA 357
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
++G M+ G P+V TY +I G C+ +++EA K D M +G P +VTYN
Sbjct: 358 EECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCF 417
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
+ C+ + D A+ L G MV P V T+ L+ F ++ P A + M +
Sbjct: 418 LRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDC 477
Query: 183 VPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVML 228
V +++T +++GLF C EA L + + L V++ L
Sbjct: 478 VQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFL 523
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 100/229 (43%), Gaps = 4/229 (1%)
Query: 73 VHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDV 132
+ V +P + +N L+ C ++E + M R P T+N L GWC+V+D
Sbjct: 226 IRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRM-RHRVKPDANTFNVLFFGWCRVRDP 284
Query: 133 DRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHG---QVPNLQTC 189
+A+ LL EM+ G KP+ T+ A + FCQ G A +LF M G P +T
Sbjct: 285 KKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTF 344
Query: 190 TVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXX 249
+++ L K E L M + D+ Y +++GMC
Sbjct: 345 ALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSN 404
Query: 250 XXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFV 298
D T+N +R LC DEA +L RM E+ C P+ +YN+ +
Sbjct: 405 KGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLI 453
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 3/178 (1%)
Query: 2 KNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGL 61
K S PT ++ +I L K + +E L+ M+ G +PDV T+ +++G
Sbjct: 332 KGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEK 391
Query: 62 VSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNS 121
V A + M + G P++VTYN + C + +EA+K++ MV C PSV TYN
Sbjct: 392 VDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNM 451
Query: 122 LIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKE 179
LI + ++ D D A EM DV T+ A++ G + AKE F ++E
Sbjct: 452 LISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHR---AKEACFLLEE 506
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 93/261 (35%), Gaps = 34/261 (13%)
Query: 87 LIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEG 146
++ YC R+ +R P + +N L+ CK V LL M +
Sbjct: 205 ILRKYCERYLTHVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHR- 263
Query: 147 LKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAM 206
+KPD T+ L G+C+V P A +L M E G P T +D + EA
Sbjct: 264 VKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAA 323
Query: 207 SLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGL 266
LF M + G TF +MI L
Sbjct: 324 DLFDFM--------------ITKGSAVSAPTAK------------------TFALMIVAL 351
Query: 267 CWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDA 326
+E EL+ RM GC P+ +Y + G+ + + K+L M KG+P D
Sbjct: 352 AKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDI 411
Query: 327 NTTELLICIYSAN-KGDNAFQ 346
T + + N K D A +
Sbjct: 412 VTYNCFLRVLCENRKTDEALK 432
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 158/388 (40%), Gaps = 67/388 (17%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQ-----------KGV------- 42
M ++G++PT V++N +I+GL G + A YE ++ KG
Sbjct: 491 MMENRGVKPTYVTHNMVIEGLIDAGEL-DKAEAFYESLEHKSRENDASMVKGFCAAGCLD 549
Query: 43 ------------MPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGG 90
+P F++ ++ +S A+ ++ M +GVEP Y LIG
Sbjct: 550 HAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGA 609
Query: 91 YCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPD 150
+C + + +A + F+++V + +P + TY +I+ +C++ + +A L +M +KPD
Sbjct: 610 WCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPD 669
Query: 151 VVTWTAL----------------------------VGGFCQVGKPLAAKELFFTMKEHGQ 182
VVT++ L + +C + LF MK
Sbjct: 670 VVTYSVLLNSDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREI 729
Query: 183 VPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXX 242
VP++ T TV+L + +L R M+ D+ D+ Y V++D C
Sbjct: 730 VPDVVTYTVLLK-------NKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKR 782
Query: 243 XXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLL 302
D + +I C G L EA+ + RM E+G P+ Y + G
Sbjct: 783 IFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCC 842
Query: 303 RKLDISRSEKYLQIMKCKGF-PVDANTT 329
R + ++ K ++ M KG P A+ +
Sbjct: 843 RNGFVLKAVKLVKEMLEKGIKPTKASLS 870
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 129/307 (42%), Gaps = 8/307 (2%)
Query: 12 VSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGF 71
++Y +++GL R ++ ++ +M + G+ PDV +S +++G K + A V
Sbjct: 292 IAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNK 351
Query: 72 MVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKD 131
M+ N V +S++ YC EA +F V YN K+
Sbjct: 352 MLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGK 411
Query: 132 VDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTV 191
V+ AI L EM +G+ PDV+ +T L+GG C GK A +L M G+ P++ V
Sbjct: 412 VEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNV 471
Query: 192 ILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXX 251
+ GL EA + ME + V +N++++G+
Sbjct: 472 LAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKS 531
Query: 252 XXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCP-PNRCSYNVFVHGLLRKLDISRS 310
D M++G C G LD A E +R+E P P + +F K IS++
Sbjct: 532 RENDAS----MVKGFCAAGCLDHAFERFIRLE---FPLPKSVYFTLFTSLCAEKDYISKA 584
Query: 311 EKYLQIM 317
+ L M
Sbjct: 585 QDLLDRM 591
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 148/363 (40%), Gaps = 39/363 (10%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG--- 60
S G P I + N LI + GR G +E+ + G+ D T+ ++V +
Sbjct: 175 SLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALWRNDDKE 234
Query: 61 ---------LVSGAR--CVMG-----------------FMVHVGVEPNV--------VTY 84
L+S R CV F++ + N+ + Y
Sbjct: 235 ELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAY 294
Query: 85 NSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVN 144
++ G C ++E+A V M + G P V Y+++I G K ++ +A+ + +M+
Sbjct: 295 RKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLK 354
Query: 145 EGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSE 204
+ + + V ++++ +CQ+G A +LF +E + V D L K E
Sbjct: 355 KRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEE 414
Query: 205 AMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIR 264
A+ LFR M I D++ Y ++ G C D +N++
Sbjct: 415 AIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAG 474
Query: 265 GLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPV 324
GL GL EA E L ME G P ++N+ + GL+ ++ ++E + + ++ K
Sbjct: 475 GLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSREN 534
Query: 325 DAN 327
DA+
Sbjct: 535 DAS 537
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 129/353 (36%), Gaps = 64/353 (18%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
+ G P IV YN L GL G +E L M +GV P T +++++G G +
Sbjct: 458 DGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGEL 517
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQME------------------------ 98
A + H E + CL H E
Sbjct: 518 DKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAE 577
Query: 99 -----EAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVT 153
+A + D M + G P Y LI WC+V +V +A +V + + PD+ T
Sbjct: 578 KDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFT 637
Query: 154 WTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAME 213
+T ++ +C++ +P A LF MK P++ T +V+L+ + + R ME
Sbjct: 638 YTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREME 690
Query: 214 KSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRG-------- 265
D+ D+V Y +M++ C D T+ ++++
Sbjct: 691 AFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSR 750
Query: 266 -----------------LCWE---GLLDEAEELLMRMEENGCPPNRCSYNVFV 298
+ W+ G L EA+ + +M E+G P+ Y +
Sbjct: 751 EMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALI 803
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 120/289 (41%), Gaps = 6/289 (2%)
Query: 12 VSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGF 71
V YN L K G+ +E L EM KG+ PDV ++ L+ G +G S A +M
Sbjct: 397 VCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIE 456
Query: 72 MVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKD 131
M G P++V YN L GG +EA + +M RG P+ VT+N +I G +
Sbjct: 457 MDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGE 516
Query: 132 VDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTV 191
+D+A + ++ + D ++V GFC G A E F ++ +P T+
Sbjct: 517 LDKAEAFYESLEHKSREND----ASMVKGFCAAGCLDHAFERFIRLE--FPLPKSVYFTL 570
Query: 192 ILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXX 251
+ + S+A L M K ++ + +Y ++ C
Sbjct: 571 FTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKK 630
Query: 252 XXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHG 300
D +T+ IMI C +A L M+ P+ +Y+V ++
Sbjct: 631 IVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS 679
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 89/184 (48%), Gaps = 7/184 (3%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCV 68
P +V Y +I K+ L +M ++ ++PDV T+++L+ + L +R +
Sbjct: 696 PDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNL---SREM 752
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
F V+P+V Y LI C + EA ++FD M+ G P Y +LI CK
Sbjct: 753 KAF----DVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCK 808
Query: 129 VKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQT 188
+ + A + M+ G+KPDVV +TAL+ G C+ G L A +L M E G P +
Sbjct: 809 MGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKAS 868
Query: 189 CTVI 192
+ +
Sbjct: 869 LSAV 872
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 80/153 (52%), Gaps = 7/153 (4%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+ I P +V+Y L++ K L EM V PDV +++L+D K G +
Sbjct: 727 REIVPDVVTYTVLLKN-------KPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGE 779
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A+ + M+ GV+P+ Y +LI C ++EA +FD M+ G P VV Y +LI
Sbjct: 780 AKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIA 839
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTAL 157
G C+ V +A+ L+ EM+ +G+KP + +A+
Sbjct: 840 GCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAV 872
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 133/332 (40%), Gaps = 8/332 (2%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
GI P + Y+ +I+G K + + +M++K + S ++ + + G S A
Sbjct: 321 GIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEA 380
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ + + V YN ++EEA+++F M +G P V+ Y +LI G
Sbjct: 381 YDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGG 440
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
C A L+ EM G PD+V + L GG G A E M+ G P
Sbjct: 441 CCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPT 500
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
T ++++GL +A + + ++E + D M+ G C
Sbjct: 501 YVTHNMVIEGLIDAGELDKAEAFYESLEHKSREND----ASMVKGFCAAGCLDHAFERFI 556
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWE-GLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
+T + LC E + +A++LL RM + G P + Y + R
Sbjct: 557 RLEFPLPKSVYFT---LFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRV 613
Query: 305 LDISRSEKYLQIMKCKGFPVDANTTELLICIY 336
++ ++ ++ +I+ K D T ++I Y
Sbjct: 614 NNVRKAREFFEILVTKKIVPDLFTYTIMINTY 645
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 63/124 (50%)
Query: 7 IQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGAR 66
++P + Y LI K G E + +M++ GV PD ++ L+ K G + A+
Sbjct: 757 VKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAK 816
Query: 67 CVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGW 126
+ M+ GV+P+VV Y +LI G C + +A+K+ M+ +G P+ + +++ +
Sbjct: 817 MIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAVHYAK 876
Query: 127 CKVK 130
K K
Sbjct: 877 LKAK 880
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 156/352 (44%), Gaps = 8/352 (2%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
M + G++P ++YN L+ + + +M PD+ T++ ++ +G+ G
Sbjct: 287 MVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCG 346
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
L + A + + G P+ VTYNSL+ + E+ +V+ M + G +TYN
Sbjct: 347 LAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYN 406
Query: 121 SLIHGWCKVKDVDRAICLLGEMVN-EGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKE 179
++IH + K +D A+ L +M G PD +T+T L+ + + + A L M +
Sbjct: 407 TIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLD 466
Query: 180 HGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXX 239
G P LQT + ++ G K EA F M +S D + Y+VMLD +
Sbjct: 467 VGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRK 526
Query: 240 XXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEEN-GCPPNRCSYNVFV 298
+ +MI GL E D+ ++ + MEE G P S +V V
Sbjct: 527 AWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEIS-SVLV 585
Query: 299 HGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLICIYSAN-KGDNAFQELQ 349
G L + + L++ G+ ++ +T ++ YS++ + AF+ L+
Sbjct: 586 KGECFDL----AARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLE 633
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 150/334 (44%), Gaps = 4/334 (1%)
Query: 14 YNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCV--MGF 71
YN ++ + G++ + L+ M Q+G +PD+ +F+ L++ K G ++ V +
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 72 MVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKD 131
+ + G+ P+ +TYN+L+ ++ A+KVF+ M C P + TYN++I + +
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 132 VDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTV 191
A L E+ +G PD VT+ +L+ F + KE++ M++ G + T
Sbjct: 348 AAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNT 407
Query: 192 ILDGLFKCRFHSEAMSLFRAMEK-SDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXX 250
I+ K A+ L++ M+ S + D + Y V++D +
Sbjct: 408 IIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDV 467
Query: 251 XXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRS 310
T++ +I G G +EAE+ M +G P+ +Y+V + LLR + ++
Sbjct: 468 GIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKA 527
Query: 311 EKYLQIMKCKGFPVDANTTELLIC-IYSANKGDN 343
+ M G EL+I + N+ D+
Sbjct: 528 WGLYRDMISDGHTPSYTLYELMILGLMKENRSDD 561
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/302 (20%), Positives = 137/302 (45%)
Query: 49 FSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMV 108
++ +++ +GK+ L A V+G + G P++ T+NSL+ Y E A +F+ M+
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 109 RRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPL 168
R G P+V + N L+H C ++ ++ E+ + G K + ++ F + G
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIF 874
Query: 169 AAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVML 228
K+++ +MK G +P ++ ++++ L K + +A + ME+++ +++ ++N ML
Sbjct: 875 EVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSML 934
Query: 229 DGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCP 288
D T+N +I C + +E L+ +M G
Sbjct: 935 KMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLD 994
Query: 289 PNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLICIYSANKGDNAFQEL 348
P +Y + ++ + ++E+ + + KG +D + ++ I + D+ ++L
Sbjct: 995 PKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKL 1054
Query: 349 QQ 350
Q
Sbjct: 1055 LQ 1056
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 117/268 (43%), Gaps = 4/268 (1%)
Query: 81 VVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDV--DRAICL 138
V YN+++G Y + +A ++ D M +RGC+P ++++N+LI+ K + + A+ L
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVEL 284
Query: 139 LGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFK 198
L + N GL+PD +T+ L+ + A ++F M+ H P+L T ++ +
Sbjct: 285 LDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGR 344
Query: 199 CRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYT 258
C +EA LF +E D V YN +L D T
Sbjct: 345 CGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMT 404
Query: 259 FNIMIRGLCWEGLLDEAEELLMRMEE-NGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIM 317
+N +I +G LD A +L M+ +G P+ +Y V + L + + + M
Sbjct: 405 YNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEM 464
Query: 318 KCKGFPVDANTTELLICIYS-ANKGDNA 344
G T LIC Y+ A K + A
Sbjct: 465 LDVGIKPTLQTYSALICGYAKAGKREEA 492
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/320 (19%), Positives = 123/320 (38%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G PT+ S N L+ L GR +E ++ E+ G + +++D F + G +
Sbjct: 817 GPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEV 876
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ + M G P + Y +I C ++ +A + M + +NS++
Sbjct: 877 KKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKM 936
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+ ++D + + + + GL+PD T+ L+ +C+ +P L M+ G P
Sbjct: 937 YTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPK 996
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
L T ++ K + +A LF + + LD Y+ M+
Sbjct: 997 LDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQ 1056
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
T ++++ G EAE++L +++ Y+ + LR
Sbjct: 1057 MMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSK 1116
Query: 306 DISRSEKYLQIMKCKGFPVD 325
D + + L MK +G D
Sbjct: 1117 DYNSGIERLLEMKKEGLEPD 1136
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/373 (20%), Positives = 138/373 (36%), Gaps = 70/373 (18%)
Query: 14 YNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMV 73
Y +I+ K W++ ++ + Q G PD++T++ L+ + + G AR + M+
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 74 HVGVEPNVVTYNSLIGGYCLRHQME----------------------------------- 98
G P V + N L+ C+ ++E
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIF 874
Query: 99 EAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALV 158
E K++ M G LP++ Y +I CK K V A ++ EM K ++ W +++
Sbjct: 875 EVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSML 934
Query: 159 GGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDID 218
+ + +++ +KE G P+ T ++ + R E L + M
Sbjct: 935 KMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMR----- 989
Query: 219 LDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEEL 278
N+ LD DTY +I + L++AE+L
Sbjct: 990 ------NLGLD----------------------PKLDTY--KSLISAFGKQKCLEQAEQL 1019
Query: 279 LMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLICIYSA 338
+ G +R Y+ + S++EK LQ+MK G T LL+ YS+
Sbjct: 1020 FEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSS 1079
Query: 339 NKGDNAFQELQQN 351
+ +++ N
Sbjct: 1080 SGNPQEAEKVLSN 1092
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 70/153 (45%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+ P + +Y LI K ++ L E++ KG+ D + ++ G S A
Sbjct: 992 GLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKA 1051
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ M + G+EP + T + L+ Y +EA KV + + + Y+S+I
Sbjct: 1052 EKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDA 1111
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALV 158
+ + KD + I L EM EGL+PD WT V
Sbjct: 1112 YLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFV 1144
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 89/147 (60%), Gaps = 3/147 (2%)
Query: 37 MMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQ 96
M++ + P T++ ++DGF K+ V A+ ++ M G P+VVT+++LI GYC +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 97 MEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTA 156
++ M++F M RRG + + VTY +LIHG+C+V D+D A LL EM++ G+ PD +T+
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 157 LVGGFC---QVGKPLAAKELFFTMKEH 180
++ G C ++ K A E ++H
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQKSEDH 147
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 87/145 (60%)
Query: 72 MVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKD 131
M+ + P +TYNS+I G+C + ++++A ++ D M +GC P VVT+++LI+G+CK K
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 132 VDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTV 191
VD + + EM G+ + VT+T L+ GFCQVG AA++L M G P+ T
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 192 ILDGLFKCRFHSEAMSLFRAMEKSD 216
+L GL + +A ++ ++KS+
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQKSE 145
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 71/137 (51%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
I PT ++YN +I G K R + +L M KG PDV TFS L++G+ K V
Sbjct: 5 SIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNG 64
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ M G+ N VTY +LI G+C ++ A + + M+ G P +T++ ++ G
Sbjct: 65 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAG 124
Query: 126 WCKVKDVDRAICLLGEM 142
C K++ +A +L ++
Sbjct: 125 LCSKKELRKAFAILEDL 141
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 65/126 (51%)
Query: 107 MVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGK 166
M+R P+ +TYNS+I G+CK VD A +L M ++G PDVVT++ L+ G+C+ +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 167 PLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNV 226
E+F M G V N T T ++ G + A L M + D + ++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 227 MLDGMC 232
ML G+C
Sbjct: 121 MLAGLC 126
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 59/102 (57%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
SKG P +V+++ LI G K R G + EM ++G++ + T++ L+ GF + G +
Sbjct: 38 SKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLD 97
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFD 105
A+ ++ M+ GV P+ +T++ ++ G C + ++ +A + +
Sbjct: 98 AAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILE 139
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 64/144 (44%)
Query: 142 MVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRF 201
M+ + P +T+ +++ GFC+ + AK + +M G P++ T + +++G K +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 202 HSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNI 261
M +F M + I + V Y ++ G C D TF+
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 262 MIRGLCWEGLLDEAEELLMRMEEN 285
M+ GLC + L +A +L ++++
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQKS 144
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 146/332 (43%), Gaps = 5/332 (1%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KG + + +Y+ + L K +W + E M+ + + T + ++ F G
Sbjct: 115 KGHKHSSDAYDMAVDILGKAKKWDRMKEFV-ERMRGDKLVTLNTVAKIMRRFAGAGEWEE 173
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A + + G+E N + N L+ C ++E+A +V L ++ P+ T+N IH
Sbjct: 174 AVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQA-RVVLLQLKSHITPNAHTFNIFIH 232
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
GWCK V+ A+ + EM G +P V+++T ++ +CQ + + E+ M+ +G P
Sbjct: 233 GWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPP 292
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXX-XXXXXXXXX 243
N T T I+ L + EA+ + M++S D + YN ++ +
Sbjct: 293 NSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVF 352
Query: 244 XXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRME-ENGCPPNRCSYNVFVHGLL 302
+T T+N MI C D+A ELL ME N C P+ +Y +
Sbjct: 353 RVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCF 412
Query: 303 RKLDISRSEKYLQIMKCK-GFPVDANTTELLI 333
++ D+ K L+ M K +D +T LI
Sbjct: 413 KRGDVVEVGKLLKEMVTKHHLSLDESTYTFLI 444
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 92/213 (43%), Gaps = 3/213 (1%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
+ G P ++Y ++ L ++E + M + G PD ++ L+ + G +
Sbjct: 287 ANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLE 346
Query: 64 GARCVMGF-MVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRG-CLPSVVTYNS 121
A V M +GV N TYNS+I YC + ++A+++ M C P V TY
Sbjct: 347 EAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQP 406
Query: 122 LIHGWCKVKDVDRAICLLGEMVNEG-LKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEH 180
L+ K DV LL EMV + L D T+T L+ C+ A LF M
Sbjct: 407 LLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQ 466
Query: 181 GQVPNLQTCTVILDGLFKCRFHSEAMSLFRAME 213
P +TC ++L+ + K H A + M+
Sbjct: 467 DITPRHRTCLLLLEEVKKKNMHESAERIEHIMK 499
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 146/332 (43%), Gaps = 5/332 (1%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KG + + +Y+ + L K +W + E M+ + + T + ++ F G
Sbjct: 115 KGHKHSSDAYDMAVDILGKAKKWDRMKEFV-ERMRGDKLVTLNTVAKIMRRFAGAGEWEE 173
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A + + G+E N + N L+ C ++E+A +V L ++ P+ T+N IH
Sbjct: 174 AVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQA-RVVLLQLKSHITPNAHTFNIFIH 232
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
GWCK V+ A+ + EM G +P V+++T ++ +CQ + + E+ M+ +G P
Sbjct: 233 GWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPP 292
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXX-XXXXXXXXX 243
N T T I+ L + EA+ + M++S D + YN ++ +
Sbjct: 293 NSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVF 352
Query: 244 XXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRME-ENGCPPNRCSYNVFVHGLL 302
+T T+N MI C D+A ELL ME N C P+ +Y +
Sbjct: 353 RVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCF 412
Query: 303 RKLDISRSEKYLQIMKCK-GFPVDANTTELLI 333
++ D+ K L+ M K +D +T LI
Sbjct: 413 KRGDVVEVGKLLKEMVTKHHLSLDESTYTFLI 444
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 92/213 (43%), Gaps = 3/213 (1%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
+ G P ++Y ++ L ++E + M + G PD ++ L+ + G +
Sbjct: 287 ANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLE 346
Query: 64 GARCVMGF-MVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRG-CLPSVVTYNS 121
A V M +GV N TYNS+I YC + ++A+++ M C P V TY
Sbjct: 347 EAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQP 406
Query: 122 LIHGWCKVKDVDRAICLLGEMVNEG-LKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEH 180
L+ K DV LL EMV + L D T+T L+ C+ A LF M
Sbjct: 407 LLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQ 466
Query: 181 GQVPNLQTCTVILDGLFKCRFHSEAMSLFRAME 213
P +TC ++L+ + K H A + M+
Sbjct: 467 DITPRHRTCLLLLEEVKKKNMHESAERIEHIMK 499
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 120/253 (47%), Gaps = 37/253 (14%)
Query: 10 TIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVM 69
+ S+N ++ K G + GLL EM G+ PD+ T++ L+ G+ +GL A V+
Sbjct: 154 NLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVL 213
Query: 70 GFMVHVGVEPNVVTYNSL---------------IGGYCLRHQMEEAMKV----FDLMVRR 110
M G++P+ + +SL I GY LR+Q+ + V D+ ++
Sbjct: 214 KRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKT 273
Query: 111 GCLP------------SVVTYNSLIHGW---CKVKDVDRAICLLGEMVNEGLKPDVVTWT 155
G LP ++V +NSL+ G C +KD + L+ M EG+KPD +TW
Sbjct: 274 GYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAE---ALMIRMEKEGIKPDAITWN 330
Query: 156 ALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKS 215
+L G+ +GKP A ++ MKE G PN+ + T I G K A+ +F M++
Sbjct: 331 SLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEE 390
Query: 216 DIDLDIVVYNVML 228
+ + + +L
Sbjct: 391 GVGPNAATMSTLL 403
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 145/314 (46%), Gaps = 16/314 (5%)
Query: 12 VSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMP-DVQTFSILVDGFGKEGLVSGARCVMG 70
+++N ++ + G W++ L EM G D +L KEG G R + G
Sbjct: 55 LAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEG-RQIHG 113
Query: 71 FMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVK 130
+++ +G+E NV NSLI Y ++E + KVF+ M R ++ ++NS++ + K+
Sbjct: 114 YVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDR----NLSSWNSILSSYTKLG 169
Query: 131 DVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCT 190
VD AI LL EM GLKPD+VTW +L+ G+ G A + M+ G P+ + +
Sbjct: 170 YVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSIS 229
Query: 191 VILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXX 250
+L + + ++ + ++ + D+ V ++D
Sbjct: 230 SLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLID----MYIKTGYLPYARMVFDM 285
Query: 251 XXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRS 310
+ +N ++ GL + LL +AE L++RME+ G P+ ++N G + +
Sbjct: 286 MDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGY---ATLGKP 342
Query: 311 EKYLQI---MKCKG 321
EK L + MK KG
Sbjct: 343 EKALDVIGKMKEKG 356
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 99/188 (52%), Gaps = 4/188 (2%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G++P+ S + L+Q + + G K G + +++ + DV + L+D + K G + A
Sbjct: 220 GLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYA 279
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
R V M N+V +NSL+ G +++A + M + G P +T+NSL G
Sbjct: 280 RMVFDMMD----AKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASG 335
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+ + ++A+ ++G+M +G+ P+VV+WTA+ G + G A ++F M+E G PN
Sbjct: 336 YATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPN 395
Query: 186 LQTCTVIL 193
T + +L
Sbjct: 396 AATMSTLL 403
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 106/241 (43%), Gaps = 32/241 (13%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+GI+P +++N L G G+ ++ ++ +M +KGV P+V +++ + G K G
Sbjct: 320 EGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRN 379
Query: 65 ARCVMGFMVHVGVEPNVVTYNSL---------------IGGYCLRHQM----EEAMKVFD 105
A V M GV PN T ++L + G+CLR + A + D
Sbjct: 380 ALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVD 439
Query: 106 LMVRRGCLPSVV------------TYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVT 153
+ + G L S + ++N ++ G+ + I M+ G++PD +T
Sbjct: 440 MYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAIT 499
Query: 154 WTALVGGFCQVGKPLAAKELFFTMK-EHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAM 212
+T+++ G + F M+ +G +P ++ C+ ++D L + + EA + M
Sbjct: 500 FTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTM 559
Query: 213 E 213
Sbjct: 560 S 560
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 105/254 (41%), Gaps = 4/254 (1%)
Query: 45 DVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVF 104
++ +++ ++ + K G V A ++ M G++P++VT+NSL+ GY + ++A+ V
Sbjct: 154 NLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVL 213
Query: 105 DLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQV 164
M G PS + +SL+ + + + G ++ L DV T L+ + +
Sbjct: 214 KRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKT 273
Query: 165 GKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVY 224
G A+ +F M N+ ++ GL +A +L MEK I D + +
Sbjct: 274 GYLPYARMVFDMM----DAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITW 329
Query: 225 NVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEE 284
N + G + ++ + G G A ++ ++M+E
Sbjct: 330 NSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQE 389
Query: 285 NGCPPNRCSYNVFV 298
G PN + + +
Sbjct: 390 EGVGPNAATMSTLL 403
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 130/330 (39%), Gaps = 56/330 (16%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQ---KGVMPDVQTFSILVDGFGKEGL 61
K P Y L++G K GR + A +L M + + PD T++ +V F GL
Sbjct: 408 KVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGL 467
Query: 62 VSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVR-RGCLPSVVTYN 120
+ AR V+ M +GV N +TYN L+ GYC + Q++ A + M G P VV+YN
Sbjct: 468 MDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYN 527
Query: 121 SLIHGWCKVKDVDRAICLLGEMVNEGLKP------------------------------- 149
+I G + D A+ EM G+ P
Sbjct: 528 IIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMND 587
Query: 150 -----DVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSE 204
D++ W LV G+C++G A+ + MKE+G PN+ T + +G+ + R +
Sbjct: 588 PRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGD 647
Query: 205 AMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIR 264
A+ L++ +++ C D + +
Sbjct: 648 ALLLWKEIKER----------------CAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLAD 691
Query: 265 GLCWEGLLDEAEELLMRMEENGCPPNRCSY 294
+A E++ MEENG PPN+ Y
Sbjct: 692 ICVRAAFFKKALEIIACMEENGIPPNKTKY 721
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 118/270 (43%), Gaps = 40/270 (14%)
Query: 37 MMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVH---VGVEPNVVTYNSLIGGYCL 93
++ K PD + ++ L+ G+ K G V+ ++ M P+ VTY +++ +
Sbjct: 405 LLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVN 464
Query: 94 RHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNE-GLKPDVV 152
M+ A +V M R G + +TYN L+ G+CK +DRA LL EM + G++PDVV
Sbjct: 465 AGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVV 524
Query: 153 TWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLF-RA 211
++ ++ G + A F M+ G P + T ++ A +F
Sbjct: 525 SYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEM 584
Query: 212 MEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGL 271
M + +D++ +N++++G C GL
Sbjct: 585 MNDPRVKVDLIAWNMLVEGYCRL-----------------------------------GL 609
Query: 272 LDEAEELLMRMEENGCPPNRCSYNVFVHGL 301
+++A+ ++ RM+ENG PN +Y +G+
Sbjct: 610 IEDAQRVVSRMKENGFYPNVATYGSLANGV 639
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 1/143 (0%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
M GI+P +VSYN +I G EM +G+ P +++ L+ F G
Sbjct: 513 MTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSG 572
Query: 61 LVSGARCVMGFMVH-VGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTY 119
A V M++ V+ +++ +N L+ GYC +E+A +V M G P+V TY
Sbjct: 573 QPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATY 632
Query: 120 NSLIHGWCKVKDVDRAICLLGEM 142
SL +G + + A+ L E+
Sbjct: 633 GSLANGVSQARKPGDALLLWKEI 655
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 88/175 (50%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KGI+P S+ +I G + + E +L M +GV V T++I + K
Sbjct: 216 KGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKE 275
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A+ ++ M+ G++PN VTY+ LI G+C EEA K+F +MV RGC P Y +LI+
Sbjct: 276 AKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIY 335
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKE 179
CK D + A+ L E + + P +LV G + K AKEL +KE
Sbjct: 336 YLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKE 390
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 96/203 (47%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
GI+P + +YN +I+ + G ++ EM +KG+ P+ +F +++ GF E
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEV 241
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
V+ M GV V TYN I C R + +EA + D M+ G P+ VTY+ LIHG
Sbjct: 242 GKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHG 301
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+C D + A L MVN G KPD + L+ C+ G A L E VP+
Sbjct: 302 FCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPS 361
Query: 186 LQTCTVILDGLFKCRFHSEAMSL 208
+++GL K EA L
Sbjct: 362 FSIMKSLVNGLAKDSKVEEAKEL 384
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 75/163 (46%), Gaps = 1/163 (0%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
M +G+ + +YN IQ L K + KE LL M+ G+ P+ T+S L+ GF E
Sbjct: 247 MMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNED 306
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
A+ + MV+ G +P+ Y +LI C E A+ + + + +PS
Sbjct: 307 DFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMK 366
Query: 121 SLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQ 163
SL++G K V+ A L+G+ V E +V W + Q
Sbjct: 367 SLVNGLAKDSKVEEAKELIGQ-VKEKFTRNVELWNEVEAALPQ 408
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 95/237 (40%), Gaps = 36/237 (15%)
Query: 91 YCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVN-EGLKP 149
Y + ++ +++VF + + +V + N+L+ KD A + EM G++P
Sbjct: 126 YAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEP 185
Query: 150 DVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLF 209
D+ T+ ++ FC+ G ++ + M+ G PN + +++ G + E +
Sbjct: 186 DLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVL 245
Query: 210 RAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWE 269
M+ +++ + T+NI I+ LC
Sbjct: 246 AMMKDRGVNIGVS-----------------------------------TYNIRIQSLCKR 270
Query: 270 GLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDA 326
EA+ LL M G PN +Y+ +HG + D ++K +IM +G D+
Sbjct: 271 KKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDS 327
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 126/284 (44%), Gaps = 3/284 (1%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G + +N ++ L K + + +M +K PD+++++IL++G+G+E +
Sbjct: 192 GFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRV 251
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
V M G EP+VV Y +I +C + EEA++ F+ M +R C PS + SLI+G
Sbjct: 252 DEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLING 311
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
K ++ A+ + G + T+ ALVG +C + A + M+ G PN
Sbjct: 312 LGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPN 371
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+T +IL L + + EA +++ M + + Y +M+ C
Sbjct: 372 ARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWD 428
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPP 289
+ F+ +I LC E LDEA E M + G P
Sbjct: 429 EMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRP 472
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 143/344 (41%), Gaps = 5/344 (1%)
Query: 2 KNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGL 61
+N KG + T +YN LI+ L K ++K L+ +M K ++ +TF+++ + +
Sbjct: 119 ENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSK-ETFALISRRYARARK 177
Query: 62 VSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNS 121
V A M G + +N ++ + +A KVFD M ++ P + +Y
Sbjct: 178 VKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTI 237
Query: 122 LIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHG 181
L+ GW + ++ R + EM +EG +PDVV + ++ C+ K A F M++
Sbjct: 238 LLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRN 297
Query: 182 QVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXX 241
P+ +++GL + ++A+ F + S L+ YN ++ C
Sbjct: 298 CKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAY 357
Query: 242 XXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGL 301
+ T++I++ L EA E+ M C P +Y + V
Sbjct: 358 KTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMF 414
Query: 302 LRKLDISRSEKYLQIMKCKG-FPVDANTTELLICIYSANKGDNA 344
K + + K MK KG P + L+ + NK D A
Sbjct: 415 CNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEA 458
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 127/307 (41%), Gaps = 4/307 (1%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
M+ S G++ ++ N L+ L K + + ++ + PD +TF+IL+ GF K
Sbjct: 229 MEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFD-TIKPDARTFNILIHGFCKAR 287
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
AR +M M P+VVTY S + YC ++ + M GC P+VVTY
Sbjct: 288 KFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYT 347
Query: 121 SLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEH 180
++H K K V A+ + +M +G PD +++L+ + G+ A E+F M
Sbjct: 348 IVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQ 407
Query: 181 GQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDL---DIVVYNVMLDGMCXXXXX 237
G ++ ++ A+ L + ME + + ++ Y +L C
Sbjct: 408 GVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKM 467
Query: 238 XXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVF 297
D T+ ++IRGLC G ++EA G P + +
Sbjct: 468 KLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKML 527
Query: 298 VHGLLRK 304
V L +K
Sbjct: 528 VDELEKK 534
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 110/230 (47%), Gaps = 2/230 (0%)
Query: 2 KNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQK-GVMPDVQTFSILVDGFGKEG 60
KN + T+ + + +++ L K G++ + EM + GV D + L+D KE
Sbjct: 194 KNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKEN 253
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
+ A V + ++P+ T+N LI G+C + ++A + DLM P VVTY
Sbjct: 254 SIEHAHEVF-LKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYT 312
Query: 121 SLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEH 180
S + +CK D R +L EM G P+VVT+T ++ + + A ++ MKE
Sbjct: 313 SFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKED 372
Query: 181 GQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDG 230
G VP+ + + ++ L K +A +F M + D++VYN M+
Sbjct: 373 GCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISA 422
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 94/234 (40%), Gaps = 12/234 (5%)
Query: 111 GCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPD------VVTWTALVGGFCQV 164
G + S TYN+++ K ++ D L+ E+VNE K + + T + ++ +
Sbjct: 161 GYVHSGHTYNAMVDVLGKCRNFD----LMWELVNEMNKNEESKLVTLDTMSKVMRRLAKS 216
Query: 165 GKPLAAKELFFTM-KEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVV 223
GK A + F M K +G + ++D L K A +F + + I D
Sbjct: 217 GKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDT-IKPDART 275
Query: 224 YNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRME 283
+N+++ G C D T+ + C EG E+L M
Sbjct: 276 FNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMR 335
Query: 284 ENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLICIYS 337
ENGC PN +Y + +H L + ++ + + MK G DA LI I S
Sbjct: 336 ENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILS 389
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 127/265 (47%), Gaps = 3/265 (1%)
Query: 72 MVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKD 131
M +G NV T+N +I +C ++ EA+ VF M++ G P+VV++N +I G CK D
Sbjct: 209 MDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGD 268
Query: 132 VDRAICLLGE---MVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQT 188
+ A+ LLG+ M + P+ VT+ +++ GFC+ G+ A+ + M + G N +T
Sbjct: 269 MRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERT 328
Query: 189 CTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXX 248
++D + EA+ L M + ++ V+YN ++ +
Sbjct: 329 YGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMN 388
Query: 249 XXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDIS 308
D +T I++RGLC G + EA E ++ E + +N +H +R ++
Sbjct: 389 SKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLA 448
Query: 309 RSEKYLQIMKCKGFPVDANTTELLI 333
+++ L M +G +DA + LI
Sbjct: 449 CADQILGSMLVQGLSLDAISFGTLI 473
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 142/321 (44%), Gaps = 3/321 (0%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
+S G + ++N +I K + E + Y M++ GV P+V +F++++DG K G +
Sbjct: 210 DSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDM 269
Query: 63 SGARCV---MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTY 119
A + MG M V PN VTYNS+I G+C +++ A ++ MV+ G + TY
Sbjct: 270 RFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTY 329
Query: 120 NSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKE 179
+L+ + + D A+ L EM ++GL + V + ++V G A + M
Sbjct: 330 GALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNS 389
Query: 180 HGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXX 239
+ T +++ GL + + EA+ R + + + DIV +N ++
Sbjct: 390 KNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLAC 449
Query: 240 XXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVH 299
D +F +I G EG L+ A E+ M + N YN V+
Sbjct: 450 ADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVN 509
Query: 300 GLLRKLDISRSEKYLQIMKCK 320
GL ++ +E + M+ K
Sbjct: 510 GLSKRGMAGAAEAVVNAMEIK 530
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 139/329 (42%), Gaps = 41/329 (12%)
Query: 7 IQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGAR 66
+ P V+YN +I G K GR + +M++ GV + +T+ LVD +G+ G A
Sbjct: 287 VSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEAL 346
Query: 67 CVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFD---------------LMVRRG 111
+ M G+ N V YNS++ + +E AM V ++VR
Sbjct: 347 RLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGL 406
Query: 112 C--------------------LPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDV 151
C + +V +N+L+H + + K + A +LG M+ +GL D
Sbjct: 407 CRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDA 466
Query: 152 VTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRA 211
+++ L+ G+ + GK A E++ M + + NL I++GL K A ++ A
Sbjct: 467 ISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNA 526
Query: 212 MEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXX--XXXFDTYTFNIMIRGLCWE 269
ME DIV YN +L+ TFNIMI LC
Sbjct: 527 MEIK----DIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKF 582
Query: 270 GLLDEAEELLMRMEENGCPPNRCSYNVFV 298
G ++A+E+L M E G P+ +Y +
Sbjct: 583 GSYEKAKEVLKFMVERGVVPDSITYGTLI 611
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Query: 11 IVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQ--TFSILVDGFGKEGLVSGARCV 68
IV+YN L+ K G +E +L +M ++ V TF+I+++ K G A+ V
Sbjct: 532 IVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEV 591
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
+ FMV GV P+ +TY +LI + E+ +++ D ++ +G P Y S++
Sbjct: 592 LKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIVR 647
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCV 68
+V YN ++ GL K G AG ++ + D+ T++ L++ K G V A +
Sbjct: 499 SNLVIYNSIVNGLSKRGM----AGAAEAVVNAMEIKDIVTYNTLLNESLKTGNVEEADDI 554
Query: 69 MGFMVHVGVEPNV--VTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGW 126
+ M E +V VT+N +I C E+A +V MV RG +P +TY +LI +
Sbjct: 555 LSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSF 614
Query: 127 CKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKE 172
K + ++ + L ++ +G+ P + ++V +PL +E
Sbjct: 615 SKHRSQEKVVELHDYLILQGVTPHEHIYLSIV-------RPLLDRE 653
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 152/371 (40%), Gaps = 36/371 (9%)
Query: 3 NSKGIQPTIVS-YNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGL 61
+S +P + S +N LI K GR + A L EM++ GV D TF+ ++ G G
Sbjct: 296 DSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGH 355
Query: 62 VSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNS 121
+S A ++ M G+ P+ TYN L+ + +E A++ + + + G P VT+ +
Sbjct: 356 LSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRA 415
Query: 122 LIHGWCKVKDVDRAICLLGEM-------------------VNEGL-----------KPDV 151
++H C+ K V ++ EM VNEGL + D
Sbjct: 416 VLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDC 475
Query: 152 V----TWTALVGGFCQVGKPLAAKELFFTMKE-HGQVPNLQTCTVILDGLFKCRFHSEAM 206
V T A++ + + G + A+ +F+ + GQ ++ V++ K + H +A+
Sbjct: 476 VLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKAL 535
Query: 207 SLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGL 266
SLF+ M+ D YN + + T+ MI
Sbjct: 536 SLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASY 595
Query: 267 CWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDA 326
GLL +A +L ME+ G PN Y ++G + + +Y ++M+ G +
Sbjct: 596 VRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNH 655
Query: 327 NTTELLICIYS 337
LI YS
Sbjct: 656 IVLTSLIKAYS 666
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 117/272 (43%), Gaps = 2/272 (0%)
Query: 25 GRWKEGAGLLY-EMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVT 83
G W E + Y + G DV +++++ +GK L A + M + G P+ T
Sbjct: 493 GLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECT 552
Query: 84 YNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMV 143
YNSL ++EA ++ M+ GC P TY ++I + ++ + A+ L M
Sbjct: 553 YNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAME 612
Query: 144 NEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHS 203
G+KP+ V + +L+ GF + G A + F M+EHG N T ++ K
Sbjct: 613 KTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLE 672
Query: 204 EAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMI 263
EA ++ M+ S+ D+ N ML +C D +F M+
Sbjct: 673 EARRVYDKMKDSEGGPDVAASNSML-SLCADLGIVSEAESIFNALREKGTCDVISFATMM 731
Query: 264 RGLCWEGLLDEAEELLMRMEENGCPPNRCSYN 295
G+LDEA E+ M E+G + S+N
Sbjct: 732 YLYKGMGMLDEAIEVAEEMRESGLLSDCTSFN 763
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 136/339 (40%), Gaps = 28/339 (8%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCV 68
P ++ YN +++ L + G+W E EM GV+P T+ +LVD +GK GLV A
Sbjct: 143 PNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKEALLW 202
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
+ M P+ VT +++ + + + A + F GWC
Sbjct: 203 IKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFF-------------------KGWCA 243
Query: 129 VKDVDRAICLLGEMVNEGLKPDVVTWTALVG-GFCQVG--KPLAAKELFFTMKEHG--QV 183
K VD + + + G V + +VG P+ K L F +
Sbjct: 244 GK-VDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGARNPI-EKSLHFASGSDSSPRK 301
Query: 184 PNL-QTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXX 242
P L T ++D K ++A +LF M KS + +D V +N M+
Sbjct: 302 PRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAES 361
Query: 243 XXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLL 302
DT T+NI++ G ++ A E ++ + G P+ ++ +H L
Sbjct: 362 LLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILC 421
Query: 303 RKLDISRSEKYLQIMKCKGFPVDANTTELLICIYSANKG 341
++ ++ E + M +D ++ +++ +Y N+G
Sbjct: 422 QRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMY-VNEG 459
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 113/292 (38%), Gaps = 36/292 (12%)
Query: 31 AGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVM-GFMVHVGVEPNVVTYNSLIG 89
A L+E Q + T + ++D + ++GL A V G G +V+ YN +I
Sbjct: 464 AKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIK 523
Query: 90 GYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKP 149
Y E+A+ +F M +G P TYNSL V VD A +L EM++ G KP
Sbjct: 524 AYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKP 583
Query: 150 DVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLF 209
T+ A++ + ++G S+A+ L+
Sbjct: 584 GCKTYAAMIASYVRLG-----------------------------------LLSDAVDLY 608
Query: 210 RAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWE 269
AMEK+ + + VVY +++G + +I+
Sbjct: 609 EAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKV 668
Query: 270 GLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKG 321
G L+EA + +M+++ P+ + N + +S +E ++ KG
Sbjct: 669 GCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKG 720
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 112/220 (50%)
Query: 13 SYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFM 72
SYN +I G K G +E +L EM++ G PD ++S L++G G+ G ++ + + +
Sbjct: 257 SYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNI 316
Query: 73 VHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDV 132
H G P+ YN++I + +E+M+ + M+ C P++ TY+ L+ G K + V
Sbjct: 317 KHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKV 376
Query: 133 DRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVI 192
A+ + EM++ G+ P T+ + C G P AA ++ ++ G + ++
Sbjct: 377 SDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLL 436
Query: 193 LDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMC 232
L L + ++++ M++S D+ VY ++DG+C
Sbjct: 437 LKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLC 476
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 141/329 (42%), Gaps = 3/329 (0%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+ + SY+ +++ L + + +L M+ +GV PD++ +I +D F + V A
Sbjct: 146 GVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRA 205
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLP-SVVTYNSLIH 124
+ GV+ + ++N+L+ C R + A VF+ ++G +P +YN +I
Sbjct: 206 IELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFN--AKKGNIPFDSCSYNIMIS 263
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
GW K+ +V+ +L EMV G PD ++++ L+ G + G+ + E+F +K G VP
Sbjct: 264 GWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVP 323
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
+ ++ R E+M +R M + + ++ Y+ ++ G+
Sbjct: 324 DANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIF 383
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
T ++ LC G A + + + GC + +Y + + L R
Sbjct: 384 EEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRF 443
Query: 305 LDISRSEKYLQIMKCKGFPVDANTTELLI 333
M+ G+P D E ++
Sbjct: 444 GKCGMLLNVWDEMQESGYPSDVEVYEYIV 472
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 140/320 (43%), Gaps = 4/320 (1%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMP-DVQTFSILVDGFGKEGLV 62
S G++ + S+N L++ L + R A +KG +P D +++I++ G+ K G V
Sbjct: 214 SFGVKCSTESFNALLRCLCE--RSHVSAAKSVFNAKKGNIPFDSCSYNIMISGWSKLGEV 271
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
V+ MV G P+ ++Y+ LI G ++ +++++FD + +G +P YN++
Sbjct: 272 EEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAM 331
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
I + +D D ++ M++E +P++ T++ LV G + K A E+F M G
Sbjct: 332 ICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGV 391
Query: 183 VPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXX 242
+P T L L AM +++ K+ + Y ++L +
Sbjct: 392 LPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLN 451
Query: 243 XXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLL 302
D + ++ GLC G L+ A ++ G PNR Y+ L+
Sbjct: 452 VWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLM 511
Query: 303 RKLDISRSEK-YLQIMKCKG 321
+ K +L+I K +
Sbjct: 512 ASNKTELAYKLFLKIKKARA 531
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 87/200 (43%), Gaps = 9/200 (4%)
Query: 155 TALVGGFCQVGKPLAAKELFFTMKE-------HGQVPNLQTCTVILDGLFKCRFHSEAMS 207
T VG + + + L ++LF M + G P+L+ T+ +D + + A+
Sbjct: 148 TKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIE 207
Query: 208 LFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLC 267
LF E + +N +L +C FD+ ++NIMI G
Sbjct: 208 LFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGNIP-FDSCSYNIMISGWS 266
Query: 268 WEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDAN 327
G ++E E++L M E+G P+ SY+ + GL R I+ S + +K KG DAN
Sbjct: 267 KLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDAN 326
Query: 328 TTELLICIY-SANKGDNAFQ 346
+IC + SA D + +
Sbjct: 327 VYNAMICNFISARDFDESMR 346
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 106/266 (39%), Gaps = 8/266 (3%)
Query: 76 GVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRA 135
GV +V +Y+ ++ R M V MV G P + + + +V V RA
Sbjct: 146 GVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRA 205
Query: 136 ICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCT--VIL 193
I L E + G+K ++ AL+ C+ AAK +F K G +P +C+ +++
Sbjct: 206 IELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKK--GNIP-FDSCSYNIMI 262
Query: 194 DGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXX 253
G K E + + M +S D + Y+ +++G+
Sbjct: 263 SGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNV 322
Query: 254 FDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKY 313
D +N MI DE+ RM + C PN +Y+ V GL++ +S + +
Sbjct: 323 PDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEI 382
Query: 314 LQIMKCKG-FPVDANTTELL--ICIY 336
+ M +G P T L +C Y
Sbjct: 383 FEEMLSRGVLPTTGLVTSFLKPLCSY 408
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 111/236 (47%), Gaps = 14/236 (5%)
Query: 10 TIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVM 69
T S CL++ L + G KE Y M + PDV ++ +++ + G AR ++
Sbjct: 164 TTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLL 223
Query: 70 GFMVHVGVE--PNVVTYNSLIGGYC-----------LRHQMEEAMKVFDLMVRRGCLPSV 116
M G P+ TY LI YC +R +M EA ++F M+ RG +P V
Sbjct: 224 DQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDV 283
Query: 117 VTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFT 176
VTYN LI G CK + RA+ L +M +G P+ VT+ + + + + A E+ T
Sbjct: 284 VTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRT 343
Query: 177 MKEHGQ-VPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGM 231
MK+ G VP T T ++ L + R +EA L M ++ + Y ++ D +
Sbjct: 344 MKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDAL 399
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 84/153 (54%)
Query: 14 YNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMV 73
Y+ LI L K GR E + +L EM +KG PD T+++L++GF E A V+ MV
Sbjct: 261 YSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMV 320
Query: 74 HVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVD 133
G++P+V++YN ++G + + EEA +F+ M RRGC P ++Y + G C+ +
Sbjct: 321 EKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFE 380
Query: 134 RAICLLGEMVNEGLKPDVVTWTALVGGFCQVGK 166
A +L EM+ +G KP + C+ GK
Sbjct: 381 EAAVILDEMLFKGYKPRRDRLEGFLQKLCESGK 413
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 109/250 (43%), Gaps = 9/250 (3%)
Query: 78 EPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAIC 137
+P+ TYN LI G ++A+K+FD MV++ P+ VT+ +LIHG CK V A+
Sbjct: 149 KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALK 208
Query: 138 LLGEMVN-EGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGL 196
+ +M+ G++P V + +L+ CQ+G+ A +L E + + ++ L
Sbjct: 209 MKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSL 268
Query: 197 FKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDT 256
K +E + M + D V YNV+++G C D
Sbjct: 269 IKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDV 328
Query: 257 YTFNIMI----RGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEK 312
++N+++ R WE EA L M GC P+ SY + GL L +
Sbjct: 329 ISYNMILGVFFRIKKWE----EATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAV 384
Query: 313 YLQIMKCKGF 322
L M KG+
Sbjct: 385 ILDEMLFKGY 394
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 119/296 (40%), Gaps = 38/296 (12%)
Query: 8 QPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARC 67
+P +YN LI G + G + + L EM++K V P TF L+ G K+ V A
Sbjct: 149 KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALK 208
Query: 68 VMGFMVHV-GVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGW 126
+ M+ V GV P V Y SLI C ++ A K+ D Y++LI
Sbjct: 209 MKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSL 268
Query: 127 CKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNL 186
K + +L EM +G KPD VT+ L+ GFC +A + M E G P++
Sbjct: 269 IKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDV 328
Query: 187 QTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXX 246
+ +IL F+ + EA LF M + C
Sbjct: 329 ISYNMILGVFFRIKKWEEATYLFEDMPRRG---------------CSP------------ 361
Query: 247 XXXXXXXFDTYTFNIMIRGLCWEGL-LDEAEELLMRMEENGCPPNRCSYNVFVHGL 301
DT ++ I+ GLC EGL +EA +L M G P R F+ L
Sbjct: 362 --------DTLSYRIVFDGLC-EGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKL 408
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G++PT+ Y LI+ L + G L E + + D +S L+ K G +
Sbjct: 218 GVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEV 277
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ M G +P+ VTYN LI G+C+ + E A +V D MV +G P V++YN ++
Sbjct: 278 SMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGV 337
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQ 163
+ ++K + A L +M G PD +++ + G C+
Sbjct: 338 FFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCE 375
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 88/224 (39%), Gaps = 36/224 (16%)
Query: 114 PSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKEL 173
P TYN LIHG + D A+ L EMV + +KP VT+ L+ G C+ + A ++
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 174 FFTM-KEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMC 232
M K +G P + ++ L + S A L + I +D +Y+ +
Sbjct: 210 KHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTL----- 264
Query: 233 XXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRC 292
I L G +E +L M E GC P+
Sbjct: 265 ------------------------------ISSLIKAGRSNEVSMILEEMSEKGCKPDTV 294
Query: 293 SYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLICIY 336
+YNV ++G + D + + L M KG D + +++ ++
Sbjct: 295 TYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVF 338
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 1/141 (0%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KG++P ++SYN ++ F+ +W+E L +M ++G PD ++ I+ DG +
Sbjct: 322 KGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEE 381
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A ++ M+ G +P + C ++E KV + RG ++ +I
Sbjct: 382 AAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSL-HRGIAGDADVWSVMIP 440
Query: 125 GWCKVKDVDRAICLLGEMVNE 145
CK + +I LL V E
Sbjct: 441 TMCKEPVISDSIDLLLNTVKE 461
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 92/168 (54%), Gaps = 13/168 (7%)
Query: 14 YNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMV 73
YN +I GL K G++ E + ++ G+ PDVQT+++++ F G A + M+
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FSSLG---RAEKLYAEMI 72
Query: 74 HVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVD 133
G+ P+ +TYNS+I G C ++++ +A KV S T+N+LI+G+CK V
Sbjct: 73 RRGLVPDTITYNSMIHGLCKQNKLAQARKVS---------KSCSTFNTLINGYCKATRVK 123
Query: 134 RAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHG 181
+ L EM G+ +V+T+T L+ GF QVG A ++F M +G
Sbjct: 124 DGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNG 171
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 88/158 (55%), Gaps = 13/158 (8%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+QP + +YN +I +F L EM+++G++PD T++ ++ G K+ ++ A
Sbjct: 44 GLQPDVQTYNMMI----RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA 99
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
R V + T+N+LI GYC ++++ M +F M RRG + +V+TY +LIHG
Sbjct: 100 R---------KVSKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHG 150
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQ 163
+ +V D + A+ + EMV+ G+ +T+ ++ C
Sbjct: 151 FRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCS 188
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 34 LYEMMQKGVMP-DVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYC 92
++++M++ M D ++I++ G K G A + ++ G++P+V TYN +I
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSS 60
Query: 93 LRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVV 152
L A K++ M+RRG +P +TYNS+IHG CK + +A +
Sbjct: 61 L----GRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCS 107
Query: 153 TWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAM 212
T+ L+ G+C+ + LF M G V N+ T T ++ G + + A+ +F+ M
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 213 EKSDIDLDIVVYNVMLDGMC 232
+ + + + +L +C
Sbjct: 168 VSNGVYSSSITFRDILPQLC 187
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 70/203 (34%), Gaps = 48/203 (23%)
Query: 119 YNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMK 178
YN +IHG CK D A + ++ GL+PDV T+ ++ F +G+ A++L+ M
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FSSLGR---AEKLYAEMI 72
Query: 179 EHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXX 238
G VP D + YN M+ G+C
Sbjct: 73 RRGLVP-----------------------------------DTITYNSMIHGLCKQNKLA 97
Query: 239 XXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFV 298
TFN +I G C + + L M G N +Y +
Sbjct: 98 QARKVSKSCS---------TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLI 148
Query: 299 HGLLRKLDISRSEKYLQIMKCKG 321
HG + D + + Q M G
Sbjct: 149 HGFRQVGDFNTALDIFQEMVSNG 171
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 56/104 (53%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
+ ++ + + ++N LI G K R K+G L EM ++G++ +V T++ L+ GF + G
Sbjct: 96 LAQARKVSKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVG 155
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVF 104
+ A + MV GV + +T+ ++ C R ++ +A+ +
Sbjct: 156 DFNTALDIFQEMVSNGVYSSSITFRDILPQLCSRKELRKAVAML 199
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Query: 208 LFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLC 267
+F+ M +S++D+D YN+++ G+C D T+N+MIR
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRF-- 58
Query: 268 WEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEK 312
L AE+L M G P+ +YN +HGL ++ ++++ K
Sbjct: 59 --SSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARK 101
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 127/317 (40%), Gaps = 37/317 (11%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
GI ++V+ N ++ G K + L EM++ D + L+ G VS
Sbjct: 175 GISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEF--DSERIRCLIRALCDGGDVSEG 232
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ + G++P Y LI G+C +V M+ PS+ Y +I G
Sbjct: 233 YELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKG 292
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
C K A C+ + ++G PD V +T ++ GFC+ G +A++L+F M + G PN
Sbjct: 293 LCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPN 352
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
V++ G FK + +I L YN ML
Sbjct: 353 EFAYNVMIHGHFK---------------RGEISLVEAFYNEMLRNGYGGTML-------- 389
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
+ N MI+G C G DEA E+ M E G PN +YN + G ++
Sbjct: 390 ------------SCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKEN 437
Query: 306 DISRSEKYLQIMKCKGF 322
+ + K + +K G
Sbjct: 438 KVEKGLKLYKELKALGL 454
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 83/154 (53%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KG P V Y +I+G + G L +EM++KG+ P+ +++++ G K G +S
Sbjct: 312 KGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISL 371
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
M+ G +++ N++I G+C + +EA ++F M G P+ +TYN+LI
Sbjct: 372 VEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIK 431
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALV 158
G+CK V++ + L E+ GLKP + + ALV
Sbjct: 432 GFCKENKVEKGLKLYKELKALGLKPSGMAYAALV 465
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 128/341 (37%), Gaps = 45/341 (13%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCV 68
P VS N L L K L G P+ V +EGLV A V
Sbjct: 111 PGPVSLNILFGALLDGKAVKAAKSFL---DTTGFKPEPTLLEQYVKCLSEEGLVEEAIEV 167
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
+ +G+ +VVT NS++ G +++ ++ MV + LI C
Sbjct: 168 YNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSERI--RCLIRALCD 225
Query: 129 VKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQT 188
DV LL + + +GL P + L+ GFC++G E+ TM P++
Sbjct: 226 GGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYI 285
Query: 189 CTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXX 248
I+ GL + EA +F+ ++ D VVY M
Sbjct: 286 YQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTM--------------------- 324
Query: 249 XXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDIS 308
IRG C +G L A +L M + G PN +YNV +HG ++ +IS
Sbjct: 325 --------------IRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEIS 370
Query: 309 RSEKYLQIMKCKGFP---VDANTTELLICIYSANKGDNAFQ 346
E + M G+ + NT C S K D AF+
Sbjct: 371 LVEAFYNEMLRNGYGGTMLSCNTMIKGFC--SHGKSDEAFE 409
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 95/209 (45%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G+ P Y LI G + G + + +L+ M+ P + + ++ G
Sbjct: 242 QGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLE 301
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A C+ + G P+ V Y ++I G+C + + A K++ M+++G P+ YN +IH
Sbjct: 302 AYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIH 361
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G K ++ EM+ G +++ ++ GFC GK A E+F M E G P
Sbjct: 362 GHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTP 421
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAME 213
N T ++ G K + + L++ ++
Sbjct: 422 NAITYNALIKGFCKENKVEKGLKLYKELK 450
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 4/209 (1%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G++ +VSY+ +I K G + L M ++ + PD + ++ +V K VS A
Sbjct: 297 GVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEA 356
Query: 66 RCVMGFMVH-VGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
R +M M G+EPNVVTYNSLI C + EEA +VFD M+ +G P++ TY++ +
Sbjct: 357 RNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMR 416
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
++ + LL +M G +P V T+ L+ C+ L+ MKE P
Sbjct: 417 I---LRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGP 473
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAME 213
+L + V++ GLF EA ++ M+
Sbjct: 474 DLSSYIVMIHGLFLNGKIEEAYGYYKEMK 502
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 127/283 (44%), Gaps = 8/283 (2%)
Query: 11 IVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMP-DVQTFSILVDGF-GKEGLVSGARCV 68
I + L+ L ++ + L++ K P D ++F+I+++G+ G A V
Sbjct: 232 IDDFQSLLSALCRYKNVSDAGHLIF--CNKDKYPFDAKSFNIVLNGWCNVIGSPREAERV 289
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
M +VGV+ +VV+Y+S+I Y + + +K+FD M + P YN+++H K
Sbjct: 290 WMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAK 349
Query: 129 VKDVDRAICLLGEMVNE-GLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQ 187
V A L+ M E G++P+VVT+ +L+ C+ K AK++F M E G P ++
Sbjct: 350 ASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIR 409
Query: 188 TCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXX 247
T + L R E L M K + + Y +++ +C
Sbjct: 410 TYHAFMRIL---RTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEM 466
Query: 248 XXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPN 290
D ++ +MI GL G ++EA M++ G PN
Sbjct: 467 KEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 77/152 (50%), Gaps = 7/152 (4%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
M+ KGI+P +V+YN LI+ L K + +E + EM++KG+ P ++T+ +
Sbjct: 363 MEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFM-----RI 417
Query: 61 LVSGARC--VMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVT 118
L +G ++ M +G EP V TY LI C + + ++D M + P + +
Sbjct: 418 LRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSS 477
Query: 119 YNSLIHGWCKVKDVDRAICLLGEMVNEGLKPD 150
Y +IHG ++ A EM ++G++P+
Sbjct: 478 YIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 131/306 (42%), Gaps = 9/306 (2%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQ-KGVMPDVQTFSILVDGFGKEGLVS 63
+G ++ Y+ +I L K ++ L+ EM + + + QT I++ + V
Sbjct: 155 QGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVG 214
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLP-SVVTYNSL 122
A +E + + SL+ C + +A + + + P ++N +
Sbjct: 215 KAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHL--IFCNKDKYPFDAKSFNIV 272
Query: 123 IHGWCKVKDVDR-AICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHG 181
++GWC V R A + EM N G+K DVV++++++ + + G +LF MK+
Sbjct: 273 LNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKEC 332
Query: 182 QVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSD-IDLDIVVYNVMLDGMCXXXXXXXX 240
P+ + ++ L K F SEA +L + ME+ I+ ++V YN ++ +C
Sbjct: 333 IEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEA 392
Query: 241 XXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHG 300
T++ +R L +E ELL +M + GC P +Y + +
Sbjct: 393 KQVFDEMLEKGLFPTIRTYHAFMRIL---RTGEEVFELLAKMRKMGCEPTVETYIMLIRK 449
Query: 301 LLRKLD 306
L R D
Sbjct: 450 LCRWRD 455
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 129/281 (45%), Gaps = 3/281 (1%)
Query: 11 IVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMG 70
++ YN ++ K ++ L EM+++G+ PD TF+ ++ + G+ A
Sbjct: 175 VILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFE 234
Query: 71 FMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVK 130
M G EP+ VT ++I Y ++ A+ ++D VT+++LI +
Sbjct: 235 KMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSG 294
Query: 131 DVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCT 190
+ D + + EM G+KP++V + L+ + +P AK ++ + +G PN T
Sbjct: 295 NYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYA 354
Query: 191 VILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXX 250
++ + R+ +A++++R M++ + L +++YN +L MC
Sbjct: 355 ALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLL-SMCADNRYVDEAFEIFQDMKN 413
Query: 251 XXX--FDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPP 289
D++TF+ +I G + EAE L++M E G P
Sbjct: 414 CETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEP 454
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 86/190 (45%), Gaps = 1/190 (0%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G++P +V YN LI + + R + + +++ G P+ T++ LV +G+ A
Sbjct: 310 GVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDA 369
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVF-DLMVRRGCLPSVVTYNSLIH 124
+ M G+ V+ YN+L+ ++EA ++F D+ C P T++SLI
Sbjct: 370 LAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLIT 429
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
+ V A L +M G +P + T+++ + + + F + E G P
Sbjct: 430 VYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITP 489
Query: 185 NLQTCTVILD 194
+ + C +L+
Sbjct: 490 DDRFCGCLLN 499
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 107/224 (47%), Gaps = 3/224 (1%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KG+ + V+YN L+ F+ +KE + + +M + + PDV ++++L+ +G+
Sbjct: 276 KGVPQSTVTYNSLMS--FETS-YKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEE 332
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A V M+ GV P YN L+ + + +E+A VF M R P + +Y +++
Sbjct: 333 ALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLS 392
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
+ D++ A + +G +P++VT+ L+ G+ + E++ M+ G
Sbjct: 393 AYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKA 452
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVML 228
N T I+D +C+ A+ ++ ME + D NV+L
Sbjct: 453 NQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLL 496
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 108/233 (46%), Gaps = 6/233 (2%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMM---QKGVMPDVQTFSILVDGFGKE 59
S G +P+ ++Y +++ + ++KE + ++ + + PD + + +++ + K
Sbjct: 201 QSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKA 260
Query: 60 GLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTY 119
G AR V MV GV + VTYNSL+ +E K++D M R P VV+Y
Sbjct: 261 GNYEKARKVFSSMVGKGVPQSTVTYNSLM---SFETSYKEVSKIYDQMQRSDIQPDVVSY 317
Query: 120 NSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKE 179
LI + + + + A+ + EM++ G++P + L+ F G AK +F +M+
Sbjct: 318 ALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRR 377
Query: 180 HGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMC 232
P+L + T +L A F+ ++ + +IV Y ++ G
Sbjct: 378 DRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYA 430
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/334 (19%), Positives = 146/334 (43%), Gaps = 15/334 (4%)
Query: 12 VSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGF 71
+ + LI K G + +L + + G P+V +++ L++ +G+ G + A +
Sbjct: 140 IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRR 199
Query: 72 MVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMV---RRGCLPSVVTYNSLIHGWCK 128
M G EP+ +TY ++ + + +EA +VF+ ++ + P Y+ +I+ + K
Sbjct: 200 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 259
Query: 129 VKDVDRAICLLGEMVNEGLKPDVVTWTALVG---GFCQVGKPLAAKELFFTMKEHGQVPN 185
+ ++A + MV +G+ VT+ +L+ + +V K ++ M+ P+
Sbjct: 260 AGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK------IYDQMQRSDIQPD 313
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+ + +++ + R EA+S+F M + + YN++LD
Sbjct: 314 VVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFK 373
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
D +++ M+ ++ AE+ R++ +G PN +Y + G +
Sbjct: 374 SMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKAN 433
Query: 306 DISRSEKYLQIMKCKGFPVDANTTELLICIYSAN 339
D+ + + + M+ G + AN T +L I A+
Sbjct: 434 DVEKMMEVYEKMRLSG--IKANQT-ILTTIMDAS 464
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 107/224 (47%), Gaps = 3/224 (1%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KG+ + V+YN L+ F+ +KE + + +M + + PDV ++++L+ +G+
Sbjct: 283 KGVPQSTVTYNSLMS--FETS-YKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEE 339
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A V M+ GV P YN L+ + + +E+A VF M R P + +Y +++
Sbjct: 340 ALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLS 399
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
+ D++ A + +G +P++VT+ L+ G+ + E++ M+ G
Sbjct: 400 AYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKA 459
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVML 228
N T I+D +C+ A+ ++ ME + D NV+L
Sbjct: 460 NQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLL 503
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 108/233 (46%), Gaps = 6/233 (2%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMM---QKGVMPDVQTFSILVDGFGKE 59
S G +P+ ++Y +++ + ++KE + ++ + + PD + + +++ + K
Sbjct: 208 QSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKA 267
Query: 60 GLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTY 119
G AR V MV GV + VTYNSL+ +E K++D M R P VV+Y
Sbjct: 268 GNYEKARKVFSSMVGKGVPQSTVTYNSLM---SFETSYKEVSKIYDQMQRSDIQPDVVSY 324
Query: 120 NSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKE 179
LI + + + + A+ + EM++ G++P + L+ F G AK +F +M+
Sbjct: 325 ALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRR 384
Query: 180 HGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMC 232
P+L + T +L A F+ ++ + +IV Y ++ G
Sbjct: 385 DRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYA 437
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/334 (19%), Positives = 146/334 (43%), Gaps = 15/334 (4%)
Query: 12 VSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGF 71
+ + LI K G + +L + + G P+V +++ L++ +G+ G + A +
Sbjct: 147 IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRR 206
Query: 72 MVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMV---RRGCLPSVVTYNSLIHGWCK 128
M G EP+ +TY ++ + + +EA +VF+ ++ + P Y+ +I+ + K
Sbjct: 207 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 266
Query: 129 VKDVDRAICLLGEMVNEGLKPDVVTWTALVG---GFCQVGKPLAAKELFFTMKEHGQVPN 185
+ ++A + MV +G+ VT+ +L+ + +V K ++ M+ P+
Sbjct: 267 AGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK------IYDQMQRSDIQPD 320
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+ + +++ + R EA+S+F M + + YN++LD
Sbjct: 321 VVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFK 380
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
D +++ M+ ++ AE+ R++ +G PN +Y + G +
Sbjct: 381 SMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKAN 440
Query: 306 DISRSEKYLQIMKCKGFPVDANTTELLICIYSAN 339
D+ + + + M+ G + AN T +L I A+
Sbjct: 441 DVEKMMEVYEKMRLSG--IKANQT-ILTTIMDAS 471
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 130/301 (43%), Gaps = 10/301 (3%)
Query: 12 VSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGF 71
V YN L K GR +E LL EM +G++PDV ++ L+DG+ +G V A ++
Sbjct: 389 VCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDE 448
Query: 72 MVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKD 131
M+ G+ P+++TYN L+ G EE +++++ M G P+ VT + +I G C +
Sbjct: 449 MIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARK 508
Query: 132 VDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTV 191
V A + E P+ + V G+C+ G A + F + + P ++ +
Sbjct: 509 VKEAEDFFSSL--EQKCPE--NKASFVKGYCEAGLSKKAYKAFVRL----EYPLRKSVYI 560
Query: 192 -ILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXX 250
+ L + +A + + M ++ + M+ C
Sbjct: 561 KLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVER 620
Query: 251 XXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRS 310
D +T+ IMI C L +AE L M++ G P+ +Y V + L KLD
Sbjct: 621 GLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYL-KLDPEHH 679
Query: 311 E 311
E
Sbjct: 680 E 680
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 136/341 (39%), Gaps = 41/341 (12%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+GI P +++Y LI G G+ + L+ EM+ G+ PD+ T+++LV G + G
Sbjct: 417 RGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEE 476
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEA------------------------ 100
+ M G +PN VT + +I G C +++EA
Sbjct: 477 VLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCE 536
Query: 101 ----MKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTA 156
K + VR Y L C +++A +L +M ++P
Sbjct: 537 AGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGK 596
Query: 157 LVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSD 216
++G FC++ A+ LF TM E G +P+L T T+++ + +A SLF M++
Sbjct: 597 MIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRG 656
Query: 217 IDLDIVVYNVMLDG----------MCXXXXXXXXXXXXXXXXXXXXX---FDTYTFNIMI 263
I D+V Y V+LD C D + ++I
Sbjct: 657 IKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLI 716
Query: 264 RGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
C L++A EL RM ++G P+ +Y + RK
Sbjct: 717 DRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRK 757
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 132/336 (39%), Gaps = 28/336 (8%)
Query: 29 EGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLI 88
E G L +M+ KG+ + S+++ + K + A + + + V YN
Sbjct: 336 EALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAF 395
Query: 89 GGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLK 148
++EEA ++ M RG +P V+ Y +LI G+C V A+ L+ EM+ G+
Sbjct: 396 DALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMS 455
Query: 149 PDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSL 208
PD++T+ LV G + G E++ MK G PN T +VI++GL R EA
Sbjct: 456 PDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDF 515
Query: 209 FRAMEKS----------------------------DIDLDIVVYNVMLDGMCXXXXXXXX 240
F ++E+ + L VY + +C
Sbjct: 516 FSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKA 575
Query: 241 XXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHG 300
MI C + EA+ L M E G P+ +Y + +H
Sbjct: 576 HDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHT 635
Query: 301 LLRKLDISRSEKYLQIMKCKGFPVDANTTELLICIY 336
R ++ ++E + MK +G D T +L+ Y
Sbjct: 636 YCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRY 671
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 124/288 (43%), Gaps = 4/288 (1%)
Query: 10 TIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSIL---VDGFGKEGLVSGAR 66
++ Y I GL G ++ L+ E++ + + ++L V GF E + A
Sbjct: 244 SVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAE 303
Query: 67 CVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGW 126
V+ M +G +V ++I YC + EA+ D M+ +G + V + ++ +
Sbjct: 304 SVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCY 363
Query: 127 CKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNL 186
CK+ A+ E + + D V + ++G+ A EL MK+ G VP++
Sbjct: 364 CKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDV 423
Query: 187 QTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXX 246
T ++DG +A+ L M + + D++ YNV++ G+
Sbjct: 424 INYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYER 483
Query: 247 XXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSY 294
+ T +++I GLC+ + EAE+ +E+ CP N+ S+
Sbjct: 484 MKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQK-CPENKASF 530
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 151/380 (39%), Gaps = 54/380 (14%)
Query: 16 CLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHV 75
L++ G + E +L++ + + D++ + L++ + G + + + +
Sbjct: 151 ALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQL 210
Query: 76 GVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRA 135
G+ N TY ++ C + +EEA L++ SV Y + I+G C + ++A
Sbjct: 211 GLCANEYTYAIVVKALCRKGNLEEAAM---LLIEN---ESVFGYKTFINGLCVTGETEKA 264
Query: 136 ICLLGEMVNEG-LKPDVVTWT--ALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVI 192
+ L+ E+++ L D + +V GFC K AA+ + M+E G ++ C +
Sbjct: 265 VALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAV 324
Query: 193 LDGLFK---------------------------------CRFHS--EAMSLFRAMEKSDI 217
+D K C+ EA+ F+ +I
Sbjct: 325 IDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNI 384
Query: 218 DLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEE 277
LD V YNV D + D + +I G C +G + +A +
Sbjct: 385 FLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALD 444
Query: 278 LLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQI---MKCKGFPVDANTTELLI- 333
L+ M NG P+ +YNV V GL R E+ L+I MK +G +A T ++I
Sbjct: 445 LIDEMIGNGMSPDLITYNVLVSGLARN---GHEEEVLEIYERMKAEGPKPNAVTNSVIIE 501
Query: 334 --CIYSANK-GDNAFQELQQ 350
C K ++ F L+Q
Sbjct: 502 GLCFARKVKEAEDFFSSLEQ 521
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 13/203 (6%)
Query: 25 GRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTY 84
G ++ +L +M V P ++ F K V A+ + MV G+ P++ TY
Sbjct: 570 GYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTY 629
Query: 85 NSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAIC------- 137
+I YC +++++A +F+ M +RG P VVTY L+ + K+ C
Sbjct: 630 TIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVG 689
Query: 138 ------LLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTV 191
+L E G+ DVV +T L+ C++ A ELF M + G P++ T
Sbjct: 690 KRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTT 749
Query: 192 ILDGLFKCRFHSEAMSLFRAMEK 214
++ F+ + A++L + K
Sbjct: 750 LISSYFRKGYIDMAVTLVTELSK 772
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 128/311 (41%), Gaps = 9/311 (2%)
Query: 13 SYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFM 72
+Y +++ L + G +E A LL E V + ++G G A ++ +
Sbjct: 218 TYAIVVKALCRKGNLEEAAMLLIEN------ESVFGYKTFINGLCVTGETEKAVALILEL 271
Query: 73 V---HVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKV 129
+ ++ + ++ G+C +M+ A V M G V ++I +CK
Sbjct: 272 IDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKN 331
Query: 130 KDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTC 189
++ A+ L +M+ +GLK + V + ++ +C++ L A E F ++ +
Sbjct: 332 MNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCY 391
Query: 190 TVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXX 249
V D L K EA L + M+ I D++ Y ++DG C
Sbjct: 392 NVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIG 451
Query: 250 XXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISR 309
D T+N+++ GL G +E E+ RM+ G PN + +V + GL +
Sbjct: 452 NGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKE 511
Query: 310 SEKYLQIMKCK 320
+E + ++ K
Sbjct: 512 AEDFFSSLEQK 522
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGK------ 58
+G+ P + +Y +I + ++ L +M Q+G+ PDV T+++L+D + K
Sbjct: 620 RGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHH 679
Query: 59 -----EGLVSGARC--VMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRG 111
+G V + V+ G+ +VV Y LI C + +E+A ++FD M+ G
Sbjct: 680 ETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSG 739
Query: 112 CLPSVVTYNSLIHGWCKVKDVDRAICLLGEM 142
P +V Y +LI + + +D A+ L+ E+
Sbjct: 740 LEPDMVAYTTLISSYFRKGYIDMAVTLVTEL 770
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 13/182 (7%)
Query: 17 LIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVG 76
+I K +E L M+++G++PD+ T++I++ + + + A + M G
Sbjct: 597 MIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRG 656
Query: 77 VEPNVVTYNSLIGGYCL----RHQM---------EEAMKVFDLMVRRGCLPSVVTYNSLI 123
++P+VVTY L+ Y H+ +A +V G VV Y LI
Sbjct: 657 IKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLI 716
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
CK+ ++++A L M++ GL+PD+V +T L+ + + G A L + + +
Sbjct: 717 DRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKKYNI 776
Query: 184 PN 185
P+
Sbjct: 777 PS 778
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 110/227 (48%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
MK + QP +V+YN L++ + G+ + L ++ V PDV TF+ ++D +GK G
Sbjct: 198 MKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNG 257
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
++ V+ M +P+++T+N LI Y + + E+ + F ++R P++ T+N
Sbjct: 258 MIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFN 317
Query: 121 SLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEH 180
S+I + K + +D+A + +M + P +T+ ++ + G A+E+F + E
Sbjct: 318 SMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGES 377
Query: 181 GQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVM 227
+V T +L+ + + EA LF + D Y +
Sbjct: 378 DRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFL 424
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 128/300 (42%), Gaps = 14/300 (4%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLF----KFGRWKEGAGLLYEMMQKGV---MPDVQTFSILV 53
MKNS G +P YN LI K ++ G L +M KG+ P+V T++IL+
Sbjct: 159 MKNS-GCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKM--KGIERCQPNVVTYNILL 215
Query: 54 DGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCL 113
F + G V + + V P+V T+N ++ Y ++E V M C
Sbjct: 216 RAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECK 275
Query: 114 PSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKEL 173
P ++T+N LI + K ++ ++ ++ KP + T+ +++ + + A+ +
Sbjct: 276 PDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWV 335
Query: 174 FFTMKEHGQVPNLQT--CTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGM 231
F M + +P+ T C +++ G C S A +F + +SD L N ML+
Sbjct: 336 FKKMNDMNYIPSFITYECMIMMYGY--CGSVSRAREIFEEVGESDRVLKASTLNAMLEVY 393
Query: 232 CXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNR 291
C D T+ + + + ++ + L+ +ME++G PN+
Sbjct: 394 CRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNK 453
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 119/301 (39%), Gaps = 10/301 (3%)
Query: 14 YNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDG-FGKEGLVSGARCVMGFM 72
Y+ LI + K G+ + L EM G PD ++ L+ V G++
Sbjct: 136 YSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYL 195
Query: 73 VHV-GVE---PNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
+ G+E PNVVTYN L+ + ++++ +F + P V T+N ++ + K
Sbjct: 196 DKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGK 255
Query: 129 VKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQT 188
+ +L M + KPD++T+ L+ + + + ++ F ++ + P L T
Sbjct: 256 NGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPT 315
Query: 189 CTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYN--VMLDGMCXXXXXXXXXXXXXX 246
++ K R +A +F+ M + + Y +M+ G C
Sbjct: 316 FNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVG 375
Query: 247 XXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLD 306
T N M+ C GL EA++L P+ +Y F++ K D
Sbjct: 376 ESDRV--LKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYK-FLYKAYTKAD 432
Query: 307 I 307
+
Sbjct: 433 M 433
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 90/225 (40%), Gaps = 5/225 (2%)
Query: 79 PNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI----HGWCKVKDVDR 134
P+ Y+ LI + Q AM +F M GC P YN+LI H K K +++
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 135 AICLLGEMVN-EGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVIL 193
L +M E +P+VVT+ L+ F Q GK LF + P++ T ++
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVM 250
Query: 194 DGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXX 253
D K E ++ M ++ DI+ +NV++D
Sbjct: 251 DAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEK 310
Query: 254 FDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFV 298
TFN MI ++D+AE + +M + P+ +Y +
Sbjct: 311 PTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMI 355
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 99/219 (45%), Gaps = 8/219 (3%)
Query: 17 LIQGLFKFGRWKEGAGLLYEMM-QKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHV 75
L + L K +W + + M Q+ +PD +S L+ GK+G A + M +
Sbjct: 103 LFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNS 162
Query: 76 GVEPNVVTYNSLIGGYCLRHQMEEAMK----VFDLM--VRRGCLPSVVTYNSLIHGWCKV 129
G P+ YN+LI + +A++ D M + R C P+VVTYN L+ + +
Sbjct: 163 GCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIER-CQPNVVTYNILLRAFAQS 221
Query: 130 KDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTC 189
VD+ L ++ + PDV T+ ++ + + G + + M+ + P++ T
Sbjct: 222 GKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITF 281
Query: 190 TVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVML 228
V++D K + + F+++ +S + +N M+
Sbjct: 282 NVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMI 320
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 91/246 (36%), Gaps = 32/246 (13%)
Query: 101 MKVFDLMVR-RGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVG 159
++VF M + R +P Y+ LI K A+ L EM N G +PD + AL+
Sbjct: 117 LEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALIT 176
Query: 160 GFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDL 219
A E K G + ++ G+ +C+
Sbjct: 177 AHLHTRDKAKALE-----KVRGYLDKMK-------GIERCQ------------------P 206
Query: 220 DIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELL 279
++V YN++L D YTFN ++ G++ E E +L
Sbjct: 207 NVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVL 266
Query: 280 MRMEENGCPPNRCSYNVFVHGLLRKLDISRSEK-YLQIMKCKGFPVDANTTELLICIYSA 338
RM N C P+ ++NV + +K + + E+ + +M+ K P ++I A
Sbjct: 267 TRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKA 326
Query: 339 NKGDNA 344
D A
Sbjct: 327 RMIDKA 332
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 110/227 (48%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
MK + QP +V+YN L++ + G+ + L ++ V PDV TF+ ++D +GK G
Sbjct: 198 MKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNG 257
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
++ V+ M +P+++T+N LI Y + + E+ + F ++R P++ T+N
Sbjct: 258 MIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFN 317
Query: 121 SLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEH 180
S+I + K + +D+A + +M + P +T+ ++ + G A+E+F + E
Sbjct: 318 SMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGES 377
Query: 181 GQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVM 227
+V T +L+ + + EA LF + D Y +
Sbjct: 378 DRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFL 424
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 128/300 (42%), Gaps = 14/300 (4%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLF----KFGRWKEGAGLLYEMMQKGV---MPDVQTFSILV 53
MKNS G +P YN LI K ++ G L +M KG+ P+V T++IL+
Sbjct: 159 MKNS-GCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKM--KGIERCQPNVVTYNILL 215
Query: 54 DGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCL 113
F + G V + + V P+V T+N ++ Y ++E V M C
Sbjct: 216 RAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECK 275
Query: 114 PSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKEL 173
P ++T+N LI + K ++ ++ ++ KP + T+ +++ + + A+ +
Sbjct: 276 PDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWV 335
Query: 174 FFTMKEHGQVPNLQT--CTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGM 231
F M + +P+ T C +++ G C S A +F + +SD L N ML+
Sbjct: 336 FKKMNDMNYIPSFITYECMIMMYGY--CGSVSRAREIFEEVGESDRVLKASTLNAMLEVY 393
Query: 232 CXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNR 291
C D T+ + + + ++ + L+ +ME++G PN+
Sbjct: 394 CRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNK 453
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 119/301 (39%), Gaps = 10/301 (3%)
Query: 14 YNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDG-FGKEGLVSGARCVMGFM 72
Y+ LI + K G+ + L EM G PD ++ L+ V G++
Sbjct: 136 YSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYL 195
Query: 73 VHV-GVE---PNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
+ G+E PNVVTYN L+ + ++++ +F + P V T+N ++ + K
Sbjct: 196 DKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGK 255
Query: 129 VKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQT 188
+ +L M + KPD++T+ L+ + + + ++ F ++ + P L T
Sbjct: 256 NGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPT 315
Query: 189 CTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYN--VMLDGMCXXXXXXXXXXXXXX 246
++ K R +A +F+ M + + Y +M+ G C
Sbjct: 316 FNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVG 375
Query: 247 XXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLD 306
T N M+ C GL EA++L P+ +Y F++ K D
Sbjct: 376 ESDRV--LKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYK-FLYKAYTKAD 432
Query: 307 I 307
+
Sbjct: 433 M 433
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 90/225 (40%), Gaps = 5/225 (2%)
Query: 79 PNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI----HGWCKVKDVDR 134
P+ Y+ LI + Q AM +F M GC P YN+LI H K K +++
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 135 AICLLGEMVN-EGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVIL 193
L +M E +P+VVT+ L+ F Q GK LF + P++ T ++
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVM 250
Query: 194 DGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXX 253
D K E ++ M ++ DI+ +NV++D
Sbjct: 251 DAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEK 310
Query: 254 FDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFV 298
TFN MI ++D+AE + +M + P+ +Y +
Sbjct: 311 PTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMI 355
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 99/219 (45%), Gaps = 8/219 (3%)
Query: 17 LIQGLFKFGRWKEGAGLLYEMM-QKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHV 75
L + L K +W + + M Q+ +PD +S L+ GK+G A + M +
Sbjct: 103 LFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNS 162
Query: 76 GVEPNVVTYNSLIGGYCLRHQMEEAMK----VFDLM--VRRGCLPSVVTYNSLIHGWCKV 129
G P+ YN+LI + +A++ D M + R C P+VVTYN L+ + +
Sbjct: 163 GCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIER-CQPNVVTYNILLRAFAQS 221
Query: 130 KDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTC 189
VD+ L ++ + PDV T+ ++ + + G + + M+ + P++ T
Sbjct: 222 GKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITF 281
Query: 190 TVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVML 228
V++D K + + F+++ +S + +N M+
Sbjct: 282 NVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMI 320
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 91/246 (36%), Gaps = 32/246 (13%)
Query: 101 MKVFDLMVR-RGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVG 159
++VF M + R +P Y+ LI K A+ L EM N G +PD + AL+
Sbjct: 117 LEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALIT 176
Query: 160 GFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDL 219
A E K G + ++ G+ +C+
Sbjct: 177 AHLHTRDKAKALE-----KVRGYLDKMK-------GIERCQ------------------P 206
Query: 220 DIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELL 279
++V YN++L D YTFN ++ G++ E E +L
Sbjct: 207 NVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVL 266
Query: 280 MRMEENGCPPNRCSYNVFVHGLLRKLDISRSEK-YLQIMKCKGFPVDANTTELLICIYSA 338
RM N C P+ ++NV + +K + + E+ + +M+ K P ++I A
Sbjct: 267 TRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKA 326
Query: 339 NKGDNA 344
D A
Sbjct: 327 RMIDKA 332
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 111/226 (49%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G P SYN +I+ LF+ ++ A L+ + + +PDV T+ I+V+ K+ A
Sbjct: 507 GCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAA 566
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ M +G+ P V Y+S+IG + ++ EA + F M+ G P + Y +I+
Sbjct: 567 FAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINT 626
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+ + +D A L+ E+V L+P T+T L+ GF ++G + M E G PN
Sbjct: 627 YARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPN 686
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGM 231
+ T ++ K + +LF M ++DI D + Y +L G+
Sbjct: 687 VVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGL 732
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 135/333 (40%), Gaps = 40/333 (12%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G++PT+ Y+ +I L K GR E +M++ G+ PD + I+++ + + G + A
Sbjct: 577 GLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEA 636
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ +V + P+ TY LI G+ ME+ + D M+ G P+VV Y +LI
Sbjct: 637 NELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGH 696
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQV--------------------- 164
+ K D + L G M +K D + + L+ G +
Sbjct: 697 FLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQR 756
Query: 165 ---GKPLAA--------KELFFTMKEHGQV-----PNLQTCTVILDGLFKCRFHSEAMSL 208
KPL + F M+ G+V PNL I+ G EA +
Sbjct: 757 LIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNH 816
Query: 209 FRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCW 268
+M+K I ++V Y +++ D ++ +++GLC
Sbjct: 817 LESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFEGTNCEP---DQVMYSTLLKGLCD 873
Query: 269 EGLLDEAEELLMRMEENGCPPNRCSYNVFVHGL 301
+A L++ M+++G PN+ SY + L
Sbjct: 874 FKRPLDALALMLEMQKSGINPNKDSYEKLLQCL 906
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 104/216 (48%), Gaps = 11/216 (5%)
Query: 7 IQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVD---GFGKEGLVS 63
I+ ++Y L+ GL++ K+ ++ E ++ ++ + LV G G S
Sbjct: 718 IKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKS 777
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A V+G V + PN+ +N++I GYC +++EA + M + G +P++VTY L+
Sbjct: 778 FAMEVIG-KVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILM 836
Query: 124 HGWCKVKDVDRAICLLGEMVNEGL--KPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHG 181
+ D++ AI L EG +PD V ++ L+ G C +PL A L M++ G
Sbjct: 837 KSHIEAGDIESAIDLF-----EGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSG 891
Query: 182 QVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDI 217
PN + +L L R EA+ + + M DI
Sbjct: 892 INPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDI 927
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 130/336 (38%), Gaps = 29/336 (8%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
S+ I + Y LI G +K G + LL M+ G++PD T+ +L+ K +
Sbjct: 371 SEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELK 430
Query: 64 GARCVMGFMVH--VGVEPNV--------VTYNSLIG-------------------GYCLR 94
A ++ ++ G+ P V V SL+G C +
Sbjct: 431 YAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQ 490
Query: 95 HQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTW 154
A+ + MV GC P +YNS+I + ++ L+ + PDV T+
Sbjct: 491 RNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTY 550
Query: 155 TALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEK 214
+V C+ AA + M+E G P + + I+ L K EA F M +
Sbjct: 551 LIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLE 610
Query: 215 SDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDE 274
S I D + Y +M++ ++T+ ++I G G++++
Sbjct: 611 SGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEK 670
Query: 275 AEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRS 310
+ L +M E+G PN Y + L+K D S
Sbjct: 671 GCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFS 706
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 132/296 (44%), Gaps = 7/296 (2%)
Query: 12 VSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGF 71
V Y CL++ K L M+++ D F+ L+ GF K G++ R +
Sbjct: 273 VMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQ 332
Query: 72 MVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVF-DLMVRRGCLPSVVTYNSLIHGWCKVK 130
M+ GV+ NV TY+ +IG YC ++ A+++F + +V Y +LI G+ K
Sbjct: 333 MIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKG 392
Query: 131 DVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCT 190
+D+A+ LL M++ G+ PD +T+ L+ + + A + ++ ++G N
Sbjct: 393 GMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGIN----P 448
Query: 191 VILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXX 250
++D L E SL + + D +L V V+ +C
Sbjct: 449 PVIDDLGNIEVKVE--SLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNL 506
Query: 251 XXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLD 306
+++N +I+ L E ++++ L+ ++E P+ +Y + V+ L +K D
Sbjct: 507 GCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKND 562
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 97/214 (45%), Gaps = 2/214 (0%)
Query: 17 LIQGLFKFGRWKEGAGLLYEMMQKGVMP-DVQTFSILVDGFGKEGLVSGARCVMGFMVHV 75
L +GL G E G+L + MP V + L F K G + A + M
Sbjct: 207 LFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVD 266
Query: 76 GVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRA 135
G + V Y L+ YC + M AM+++ MV R +N+LIHG+ K+ +D+
Sbjct: 267 GYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKG 326
Query: 136 ICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP-NLQTCTVILD 194
+ +M+ +G++ +V T+ ++G +C+ G A LF + N+ T ++
Sbjct: 327 RVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIF 386
Query: 195 GLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVML 228
G +K +A+ L M + I D + Y V+L
Sbjct: 387 GFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLL 420
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 139/334 (41%), Gaps = 34/334 (10%)
Query: 14 YNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMV 73
+N LI G K G +G + +M++KGV +V T+ I++ + KEG V A + F+
Sbjct: 310 FNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYA--LRLFVN 367
Query: 74 HVGVEP---NVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVK 130
+ G E NV Y +LI G+ + M++A+ + M+ G +P +TY L+ K
Sbjct: 368 NTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCH 427
Query: 131 DVDRAICLLGEMVNEG--LKPDV--------VTWTALVG-------------------GF 161
++ A+ +L +++ G + P V V +L+G
Sbjct: 428 ELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTAL 487
Query: 162 CQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDI 221
C +AA M G P + ++ LF+ + SL +++ D D+
Sbjct: 488 CSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDV 547
Query: 222 VVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMR 281
Y ++++ +C ++ +I L +G + EAEE +
Sbjct: 548 DTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAK 607
Query: 282 MEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQ 315
M E+G P+ +Y + ++ R I + + ++
Sbjct: 608 MLESGIQPDEIAYMIMINTYARNGRIDEANELVE 641
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 5/189 (2%)
Query: 2 KNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGL 61
K K I P + +N +I G GR E L M ++G++P++ T++IL+ + G
Sbjct: 785 KVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGD 844
Query: 62 VSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNS 121
+ A + EP+ V Y++L+ G C + +A+ + M + G P+ +Y
Sbjct: 845 IESA---IDLFEGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEK 901
Query: 122 LIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHG 181
L+ C + A+ ++ +M + P + T L+ C+ K A+ LF M + G
Sbjct: 902 LLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSG 961
Query: 182 QVPNLQTCT 190
+ +L CT
Sbjct: 962 R--SLLNCT 968
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/308 (19%), Positives = 117/308 (37%), Gaps = 6/308 (1%)
Query: 32 GLLYEMMQKGVMPDV-QTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGG 90
L+ ++ ++G++ + ++DG +S A V F V G+E + Y +LI
Sbjct: 48 SLIVKLGRRGLLDSAREVIRRVIDGSSS---ISEAALVADFAVDNGIELDSSCYGALIRK 104
Query: 91 YCLRHQMEEAMKVFD-LMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKP 149
Q A ++ ++ G +P +S++ K++ D A L ++ G P
Sbjct: 105 LTEMGQPGVAETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAP 164
Query: 150 DVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLF 209
+ + +V C + L A F +KE G L C + GL +EA+ +
Sbjct: 165 SRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGML 224
Query: 210 RAM-EKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCW 268
+ + + L + +Y + C D + +++ C
Sbjct: 225 DTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCK 284
Query: 269 EGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANT 328
+ + A L +RM E + C +N +HG ++ + + M KG + T
Sbjct: 285 DNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFT 344
Query: 329 TELLICIY 336
++I Y
Sbjct: 345 YHIMIGSY 352
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 108/226 (47%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
++PT+V+Y LI+G + R + +L EM + + F+ ++DG G+ G +S A
Sbjct: 280 NVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEA 339
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+M P +VTYNSL+ +C + A K+ +M+ RG P+ TYN
Sbjct: 340 LGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKY 399
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+ K + + L +++ G PD +T+ ++ C+ GK A ++ MK G P+
Sbjct: 400 FSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPD 459
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGM 231
L T T+++ L + EA F + I + + ++ +G+
Sbjct: 460 LLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGL 505
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 132/307 (42%), Gaps = 2/307 (0%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCV 68
P++ +N L+ G F+ + K+ L EM V P V T+ L++G+ + V A V
Sbjct: 248 PSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEV 307
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
+ M +E N + +N +I G ++ EA+ + + P++VTYNSL+ +CK
Sbjct: 308 LEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCK 367
Query: 129 VKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQT 188
D+ A +L M+ G+ P T+ F + K L+F + E G P+ T
Sbjct: 368 AGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLT 427
Query: 189 CTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXX 248
+IL L + S AM + + M+ ID D++ +++ +C
Sbjct: 428 YHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAV 487
Query: 249 XXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDIS 308
TF ++ GL +G+ D A+ L M + P ++ N + + D
Sbjct: 488 RRGIIPQYITFKMIDNGLRSKGMSDMAKRLSSLM--SSLPHSKKLPNTYREAVDAPPDKD 545
Query: 309 RSEKYLQ 315
R + L
Sbjct: 546 RRKSILH 552
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 141/345 (40%), Gaps = 16/345 (4%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQK---GVMPDVQTFSILVDGFG 57
MK + P++ ++ ++ L K ++ L+++ ++ + TF +L+ +
Sbjct: 127 MKPGFTLSPSL--FDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYA 184
Query: 58 KEGLVSGARCVMGFMVHVGVEP------NVVTYNSLIGGYCLRHQMEEAMKVFDLM---V 108
+ G+V A + F EP + L+ C + EA + + +
Sbjct: 185 RAGMVQQA--IRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTM 242
Query: 109 RRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPL 168
+PSV +N L++GW + + + +A L EM +KP VVT+ L+ G+C++ +
Sbjct: 243 DSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQ 302
Query: 169 AAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVML 228
A E+ MK N I+DGL + SEA+ + + IV YN ++
Sbjct: 303 IAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLV 362
Query: 229 DGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCP 288
C T T+N + +E L ++ E G
Sbjct: 363 KNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHS 422
Query: 289 PNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLI 333
P+R +Y++ + L +S + + + MK +G D TT +LI
Sbjct: 423 PDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLI 467
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 68/122 (55%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
++G+ PT +YN + K + +EG L +++++ G PD T+ +++ ++G +S
Sbjct: 383 TRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLS 442
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A V M + G++P+++T LI C +EEA + FD VRRG +P +T+ +
Sbjct: 443 LAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMID 502
Query: 124 HG 125
+G
Sbjct: 503 NG 504
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 95/191 (49%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
GI+P + +YN +I+ L + G ++ EM +K + P +F +++DGF KE
Sbjct: 177 GIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEV 236
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
R VM M GV V TYN +I C R + EA + D ++ P+ VTY+ LIHG
Sbjct: 237 RKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHG 296
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+C +++D A+ L MV G KPD + L+ C+ G A L E VP+
Sbjct: 297 FCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPS 356
Query: 186 LQTCTVILDGL 196
+++GL
Sbjct: 357 FSVMKWLVNGL 367
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 111/260 (42%), Gaps = 4/260 (1%)
Query: 45 DVQTFSILVDGFGKEG-LVSGARCVMGFMVHVGVEPNVVTYN-SLIGGYCLRHQMEEAMK 102
D FS+ V +E V+ ++ + GF + +P ++ I Y + ++ +++
Sbjct: 74 DRIIFSVAVVTLAREKHFVAVSQLLDGF-IQNQPDPKSESFAVRAIILYGRANMLDRSIQ 132
Query: 103 VFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVN-EGLKPDVVTWTALVGGF 161
F + + +V + N+L+ KD A + EM G++PD+ T+ ++
Sbjct: 133 TFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVL 192
Query: 162 CQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDI 221
C+ G ++ + M+ P + +++DG +K E + R M++ + + +
Sbjct: 193 CESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGV 252
Query: 222 VVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMR 281
YN+M+ +C ++ T++++I G C E LDEA L
Sbjct: 253 ATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEV 312
Query: 282 MEENGCPPNRCSYNVFVHGL 301
M NG P+ Y +H L
Sbjct: 313 MVCNGYKPDSECYFTLIHCL 332
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 82/209 (39%)
Query: 76 GVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRA 135
G+EP++ TYN +I C + + M R+ P+ ++ +I G+ K + D
Sbjct: 177 GIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEV 236
Query: 136 ICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDG 195
++ M G+ V T+ ++ C+ K AK L + PN T ++++ G
Sbjct: 237 RKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHG 296
Query: 196 LFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFD 255
EAM+LF M + D Y ++ +C
Sbjct: 297 FCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPS 356
Query: 256 TYTFNIMIRGLCWEGLLDEAEELLMRMEE 284
++ GL +DEA+EL+ ++E
Sbjct: 357 FSVMKWLVNGLASRSKVDEAKELIAVVKE 385
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 139/324 (42%), Gaps = 8/324 (2%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMM-QKGVMPDVQTFSILVDGFGKEGLVSGARC 67
P V+ N L+ GL + E + ++ K D +++I + GFG G + A
Sbjct: 210 PGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALS 269
Query: 68 VMGFMVH------VGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNS 121
+ M P++ TYNSLI CL + ++A+ V+D + G P TY
Sbjct: 270 LFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRI 329
Query: 122 LIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHG 181
LI G CK +D A+ + GEM G PD + + L+ G + K A +LF M + G
Sbjct: 330 LIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEG 389
Query: 182 QVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXX 241
+ T +++DGLF+ +LF ++K +D + ++++ +C
Sbjct: 390 VRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAV 449
Query: 242 XXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGL 301
D T + ++ G +G D E+L+ + E PN +N V
Sbjct: 450 KLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEAS 509
Query: 302 LRKLDISRSEKYLQIMKCKGFPVD 325
L++ S+ + Y + KG +D
Sbjct: 510 LKRPQ-SKDKDYTPMFPSKGSFLD 532
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 154/395 (38%), Gaps = 58/395 (14%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G + + +Y+ + + + + G E LL M + GV D IL+D + G A
Sbjct: 87 GYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESA 146
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKV-FDLM----------------- 107
V+ +M +G N Y+S++ +H++ A+ + F L+
Sbjct: 147 LGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIV 206
Query: 108 ---------------VRRGCLPS------------------VVTYNSLIHGWCKVKDVDR 134
+RR + S +YN IHG+ D+D
Sbjct: 207 SYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDA 266
Query: 135 AICLLGEM------VNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQT 188
A+ L EM PD+ T+ +L+ C GK A ++ +K G P+ T
Sbjct: 267 ALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNST 326
Query: 189 CTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXX 248
+++ G K +AM ++ M+ + D +VYN +LDG
Sbjct: 327 YRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMV 386
Query: 249 XXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDIS 308
+T+NI+I GL G + L +++ G + ++++ L R+ +
Sbjct: 387 QEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLE 446
Query: 309 RSEKYLQIMKCKGFPVDANT-TELLICIYSANKGD 342
+ K ++ M+ +GF VD T + LLI + + D
Sbjct: 447 GAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWD 481
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 75/148 (50%)
Query: 10 TIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVM 69
T +YN ++ K G ++ G+L +M + D+ T+++++ G GK G A V+
Sbjct: 629 TSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVL 688
Query: 70 GFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKV 129
+ G ++V YN+LI +++EA ++FD M G P VV+YN++I K
Sbjct: 689 DRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKA 748
Query: 130 KDVDRAICLLGEMVNEGLKPDVVTWTAL 157
+ A L M++ G P+ VT T L
Sbjct: 749 GKLKEAYKYLKAMLDAGCLPNHVTDTIL 776
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 88/181 (48%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G +P +Y LIQG K R + + EM G +PD ++ L+DG K V+ A
Sbjct: 319 GHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEA 378
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ MV GV + TYN LI G + E +F + ++G +T++ +
Sbjct: 379 CQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQ 438
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
C+ ++ A+ L+ EM G D+VT ++L+ GF + G+ ++L ++E VPN
Sbjct: 439 LCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPN 498
Query: 186 L 186
+
Sbjct: 499 V 499
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 71/145 (48%)
Query: 48 TFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLM 107
T++ ++ F K+G AR V+ M ++ TYN +I G + + A V D +
Sbjct: 632 TYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRL 691
Query: 108 VRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKP 167
++G +V YN+LI+ K +D A L M + G+ PDVV++ ++ + GK
Sbjct: 692 TKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKL 751
Query: 168 LAAKELFFTMKEHGQVPNLQTCTVI 192
A + M + G +PN T T++
Sbjct: 752 KEAYKYLKAMLDAGCLPNHVTDTIL 776
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 59/130 (45%)
Query: 83 TYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEM 142
TYNS++ + + + A V D M C + TYN +I G K+ D A +L +
Sbjct: 632 TYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRL 691
Query: 143 VNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFH 202
+G D+V + L+ + + A +LF MK +G P++ + +++ K
Sbjct: 692 TKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKL 751
Query: 203 SEAMSLFRAM 212
EA +AM
Sbjct: 752 KEAYKYLKAM 761
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 66/124 (53%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G++ + +YN LI GLF+ GR + G L ++ +KG D TFSI+ +EG + G
Sbjct: 388 EGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEG 447
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A ++ M G ++VT +SL+ G+ + + + K+ + +P+V+ +N+ +
Sbjct: 448 AVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVE 507
Query: 125 GWCK 128
K
Sbjct: 508 ASLK 511
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 69/151 (45%), Gaps = 1/151 (0%)
Query: 80 NVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLP-SVVTYNSLIHGWCKVKDVDRAICL 138
+V N+ + Y + + A K+F++ G + TYNS++ + K A +
Sbjct: 593 DVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGV 652
Query: 139 LGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFK 198
L +M D+ T+ ++ G ++G+ A + + + G ++ +++ L K
Sbjct: 653 LDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGK 712
Query: 199 CRFHSEAMSLFRAMEKSDIDLDIVVYNVMLD 229
EA LF M+ + I+ D+V YN M++
Sbjct: 713 ATRLDEATQLFDHMKSNGINPDVVSYNTMIE 743
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 93/178 (52%), Gaps = 5/178 (2%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+GI+P ++ +I L + K+ LL +M+ KG P F+++V K G +
Sbjct: 370 RGIKP----FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDE 425
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A+ V+ M G++P+V TY +I GY M+EA ++ ++ S VTY++LI
Sbjct: 426 AKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIR 485
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFF-TMKEHG 181
G+CK+++ D A+ LL EM G++P+ + L+ FC E+ F MK+ G
Sbjct: 486 GYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKG 543
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 81/151 (53%), Gaps = 1/151 (0%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
SKG P +N ++ K G E +L M +G+ PDV T+++++ G+ K G++
Sbjct: 400 SKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMD 459
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A+ ++ + + VTY++LI GYC + +EA+K+ + M R G P+ YN LI
Sbjct: 460 EAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLI 519
Query: 124 HGWC-KVKDVDRAICLLGEMVNEGLKPDVVT 153
+C K D ++A L EM +GL + ++
Sbjct: 520 QSFCLKALDWEKAEVLFEEMKQKGLHLNAIS 550
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 131/338 (38%), Gaps = 49/338 (14%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G P +Y ++ L K + +M++ GV+ + + ++ F KEG A
Sbjct: 261 GFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEA 320
Query: 66 RCV--MGFMVHVGVEPNVVTYNSLIGGYC-----LRHQMEEAMKVFDLMVRRGCLPSVVT 118
V + + P V +LI C + E + RRG P
Sbjct: 321 YSVYELAKTKEKSLPPRFVA--TLITALCKNDGTITFAQEMLGDLSGEARRRGIKP---- 374
Query: 119 YNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMK 178
++ +IH C++++V A LL +M+++G P + +V + G AKE+ M+
Sbjct: 375 FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLME 434
Query: 179 EHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXX 238
G P++ T TVI+ G K EA + +K L V Y+
Sbjct: 435 SRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHA------------ 482
Query: 239 XXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFV 298
+IRG C DEA +LL M+ G PN YN +
Sbjct: 483 -----------------------LIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLI 519
Query: 299 HGL-LRKLDISRSEKYLQIMKCKGFPVDANTTELLICI 335
L+ LD ++E + MK KG ++A + L+ +
Sbjct: 520 QSFCLKALDWEKAEVLFEEMKQKGLHLNAISQGLIRAV 557
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/343 (20%), Positives = 133/343 (38%), Gaps = 43/343 (12%)
Query: 15 NCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVH 74
N LI K G+ K + + + G P+ +T+ + ++ K + A V M+
Sbjct: 235 NELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLK 294
Query: 75 VGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLM-VRRGCLPSVVTYNSLIHGWCKVK-DV 132
GV ++I +C + EEA V++L + LP +LI CK +
Sbjct: 295 SGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVA-TLITALCKNDGTI 353
Query: 133 DRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVI 192
A +LG++ E + + ++ ++ C++ AK L M G P ++
Sbjct: 354 TFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLV 413
Query: 193 LDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXX 252
+ K EA + + ME + D+
Sbjct: 414 VHACSKTGDLDEAKEVLKLMESRGLKPDV------------------------------- 442
Query: 253 XFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEK 312
YT+ ++I G G++DEA+E+L ++ + +Y+ + G + + + K
Sbjct: 443 ----YTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALK 498
Query: 313 YLQIMKCKGFPVDANTTELLI---CIYSAN--KGDNAFQELQQ 350
L M G +A+ LI C+ + + K + F+E++Q
Sbjct: 499 LLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQ 541
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 118/231 (51%), Gaps = 4/231 (1%)
Query: 4 SKGIQP-TIVSYNCLIQGLFKFGR-WKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGL 61
SK + P + YN ++ L +FGR ++ + EM++ GV D T+S ++ + L
Sbjct: 178 SKSLFPMETIFYNVTMKSL-RFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNL 236
Query: 62 VSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNS 121
+ A M G+ P+ VTY++++ Y ++EE + +++ V G P + ++
Sbjct: 237 YNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSV 296
Query: 122 LIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHG 181
L + + D D +L EM + +KP+VV + L+ + GKP A+ LF M E G
Sbjct: 297 LGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAG 356
Query: 182 QVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMC 232
PN +T T ++ K R+ +A+ L+ M+ +D ++YN +L+ MC
Sbjct: 357 LTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLN-MC 406
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 101/240 (42%), Gaps = 36/240 (15%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+ P V+Y+ ++ K G+ +E L + G PD FS+L FG+ G G
Sbjct: 251 GLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGI 310
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
R V+ M + V+PNVV YN+L+ + A +F+ M+ G P+ T +L+
Sbjct: 311 RYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKI 370
Query: 126 WCKVKDVDRAICLLGEM-------------------VNEGL-----------------KP 149
+ K + A+ L EM + GL +P
Sbjct: 371 YGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRP 430
Query: 150 DVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLF 209
D ++TA++ + GK A ELF M + G N+ CT ++ L K + + + +F
Sbjct: 431 DNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVF 490
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 120/298 (40%), Gaps = 1/298 (0%)
Query: 2 KNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGL 61
+++ PT + Y L + L +++ +L +M + +T +++ +GK G
Sbjct: 102 RSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGH 161
Query: 62 VSGA-RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
V A G +G + V YNSL+ C A + M+R+G P TY
Sbjct: 162 VDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYA 221
Query: 121 SLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEH 180
L++GWC + A L EM G P L+ G G +AKE+ M +
Sbjct: 222 ILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKG 281
Query: 181 GQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXX 240
G VP++QT ++++ + K + ++ K + +DI Y ++ +
Sbjct: 282 GFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEA 341
Query: 241 XXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFV 298
+ +I+G+C G+ D+A M+ PPNR Y + +
Sbjct: 342 FRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLI 399
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 107/250 (42%), Gaps = 1/250 (0%)
Query: 87 LIGGYCLRHQMEEAMKVFDLMVRR-GCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNE 145
+I Y +++A+++F+ + + GC +V YNSL+H C VK A L+ M+ +
Sbjct: 152 IIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRK 211
Query: 146 GLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEA 205
GLKPD T+ LV G+C GK A+E M G P + ++++GL + A
Sbjct: 212 GLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESA 271
Query: 206 MSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRG 265
+ M K DI +N++++ + D T+ +I
Sbjct: 272 KEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPA 331
Query: 266 LCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVD 325
+ G +DEA LL E+G P Y + G+ R + + MK K P +
Sbjct: 332 VSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPN 391
Query: 326 ANTTELLICI 335
+LI +
Sbjct: 392 RPVYTMLITM 401
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 99/227 (43%), Gaps = 1/227 (0%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G Q T+ YN L+ L + L+ M++KG+ PD +T++ILV+G+ G + A
Sbjct: 177 GCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEA 236
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ + M G P + LI G +E A ++ M + G +P + T+N LI
Sbjct: 237 QEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEA 296
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
K +V+ I + GL D+ T+ L+ ++GK A L E G P
Sbjct: 297 ISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPF 356
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMC 232
I+ G+ + +A S F M+ + VY ML MC
Sbjct: 357 PSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVY-TMLITMC 402
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 92/206 (44%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
+ +G P + LI+GL G + ++ +M + G +PD+QTF+IL++ K G V
Sbjct: 244 SRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEV 303
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
+ +G+ ++ TY +LI +++EA ++ + V G P Y +
Sbjct: 304 EFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPI 363
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
I G C+ D A +M + P+ +T L+ + GK + A M E G
Sbjct: 364 IKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGL 423
Query: 183 VPNLQTCTVILDGLFKCRFHSEAMSL 208
VP + ++ DGL H AM +
Sbjct: 424 VPISRCFDMVTDGLKNGGKHDLAMRI 449
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 84/161 (52%), Gaps = 2/161 (1%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGF-GKEGLVSG 64
GI P +V+YN +I+ L + G + + E+ + G PD+ +F+ L++ F +E V G
Sbjct: 188 GITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEG 247
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
R + M + PN+ +YNS + G + +A+ + D+M G P V TYN+LI
Sbjct: 248 DR-IWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALIT 306
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVG 165
+ +++ + EM +GL PD VT+ L+ C+ G
Sbjct: 307 AYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKG 347
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 104/224 (46%), Gaps = 1/224 (0%)
Query: 56 FGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVF-DLMVRRGCLP 114
+G G+ A + M + E V ++N+L+ Y +++EAMK F +L + G P
Sbjct: 132 YGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITP 191
Query: 115 SVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELF 174
+VTYN++I C+ +D + + E+ G +PD++++ L+ F + + ++
Sbjct: 192 DLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIW 251
Query: 175 FTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXX 234
MK PN+++ + GL + + ++A++L M+ I D+ YN ++
Sbjct: 252 DLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVD 311
Query: 235 XXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEEL 278
DT T+ ++I LC +G LD A E+
Sbjct: 312 NNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEV 355
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 85/168 (50%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G +P ++S+N L++ ++ + EG + M K + P++++++ V G + + A
Sbjct: 223 GFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDA 282
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ M G+ P+V TYN+LI Y + + +EE MK ++ M +G P VTY LI
Sbjct: 283 LNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPL 342
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKEL 173
CK D+DRA+ + E + L + +V GK A +L
Sbjct: 343 LCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQL 390
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 79/202 (39%), Gaps = 6/202 (2%)
Query: 150 DVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLF 209
D V L+ G+ G A +LF M E +++ +L + EAM F
Sbjct: 123 DFVIRIMLLYGYS--GMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTF 180
Query: 210 RAM-EKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCW 268
+ + EK I D+V YN M+ +C D +FN ++
Sbjct: 181 KELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYR 240
Query: 269 EGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANT 328
L E + + M+ PN SYN V GL R + + + +MK +G D +T
Sbjct: 241 RELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHT 300
Query: 329 TELLICIYSANKGDNAFQELQQ 350
LI Y + DN +E+ +
Sbjct: 301 YNALITAY---RVDNNLEEVMK 319
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 116/278 (41%), Gaps = 39/278 (14%)
Query: 45 DVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVF 104
D F+ L+ +E ++ AR V + H +P++ T+N L+ G+ EEA F
Sbjct: 179 DTACFNALLRTLCQEKSMTDARNVYHSLKH-QFQPDLQTFNILLSGW---KSSEEAEAFF 234
Query: 105 DLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQV 164
+ M +G P VVTYNSLI +CK +++++A L+ +M E PDV+T+T ++GG +
Sbjct: 235 EEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLI 294
Query: 165 GKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVY 224
G+P A+E+ MKE+G P D+ Y
Sbjct: 295 GQPDKAREVLKEMKEYGCYP-----------------------------------DVAAY 319
Query: 225 NVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEE 284
N + C + T+N+ R L L + EL +RM
Sbjct: 320 NAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLG 379
Query: 285 NGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGF 322
N C PN S + R + + + + M KGF
Sbjct: 380 NECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGF 417
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 9/208 (4%)
Query: 8 QPTIVSYNCLIQGLFKFGRWKEGAGLLYE---MMQKGVMPDVQTFSILVDGFGKEGLVSG 64
QP + ++N L+ G WK M KG+ PDV T++ L+D + K+ +
Sbjct: 211 QPDLQTFNILLSG------WKSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEK 264
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A ++ M P+V+TY ++IGG L Q ++A +V M GC P V YN+ I
Sbjct: 265 AYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIR 324
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
+C + + A L+ EMV +GL P+ T+ + EL+ M + +P
Sbjct: 325 NFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLP 384
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAM 212
N Q+C ++ + AM L+ M
Sbjct: 385 NTQSCMFLIKMFKRHEKVDMAMRLWEDM 412
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 77/155 (49%), Gaps = 3/155 (1%)
Query: 34 LYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCL 93
+Y ++ PD+QTF+IL+ G+ M G++P+VVTYNSLI YC
Sbjct: 202 VYHSLKHQFQPDLQTFNILLSGWKSSEEAEAFFEEMK---GKGLKPDVVTYNSLIDVYCK 258
Query: 94 RHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVT 153
++E+A K+ D M P V+TY ++I G + D+A +L EM G PDV
Sbjct: 259 DREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAA 318
Query: 154 WTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQT 188
+ A + FC + A +L M + G PN T
Sbjct: 319 YNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATT 353
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 84/173 (48%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KG++P +V+YN LI K ++ L+ +M ++ PDV T++ ++ G G G
Sbjct: 240 KGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDK 299
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
AR V+ M G P+V YN+ I +C+ ++ +A K+ D MV++G P+ TYN
Sbjct: 300 AREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFR 359
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTM 177
D+ R+ L M+ P+ + L+ F + K A L+ M
Sbjct: 360 VLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDM 412
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 80/188 (42%), Gaps = 4/188 (2%)
Query: 150 DVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLF 209
D + AL+ CQ A+ ++ ++K Q P+LQT ++L G + EA + F
Sbjct: 179 DTACFNALLRTLCQEKSMTDARNVYHSLKHQFQ-PDLQTFNILLSG---WKSSEEAEAFF 234
Query: 210 RAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWE 269
M+ + D+V YN ++D C D T+ +I GL
Sbjct: 235 EEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLI 294
Query: 270 GLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTT 329
G D+A E+L M+E GC P+ +YN + + ++K + M KG +A T
Sbjct: 295 GQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTY 354
Query: 330 ELLICIYS 337
L + S
Sbjct: 355 NLFFRVLS 362
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 81/177 (45%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCV 68
P +++Y +I GL G+ + +L EM + G PDV ++ + F + A +
Sbjct: 279 PDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKL 338
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
+ MV G+ PN TYN L + + + +++ M+ CLP+ + LI + +
Sbjct: 339 VDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKR 398
Query: 129 VKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+ VD A+ L +MV +G + L+ C + K A++ M E G P+
Sbjct: 399 HEKVDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPS 455
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
I+P IVSYN LI+ L + E LL E+ KG+ PD+ TF+ L+ +G
Sbjct: 175 SIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELG 234
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ MV V ++ TYN+ + G + +E + +F + G P V ++N++I G
Sbjct: 235 EEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRG 294
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+D A E+V G +PD T+ L+ C+ G +A ELF +
Sbjct: 295 SINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVG 354
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSD 216
T ++D L K EA + + + +D
Sbjct: 355 QTTLQQLVDELVKGSKREEAEEIVKIAKTND 385
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 138/331 (41%), Gaps = 36/331 (10%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
S+ + I Y+ ++ L R +L E + M + ++ +GK G+
Sbjct: 67 SERFRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFE 126
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVF-DLMVRRGCLPSVVTYNSL 122
A+ V M + + +V+++N+L+ Y L + + ++F +L + P +V+YN+L
Sbjct: 127 NAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTL 186
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
I C+ + A+ LL E+ N+GLKPD+VT+
Sbjct: 187 IKALCEKDSLPEAVALLDEIENKGLKPDIVTFN--------------------------- 219
Query: 183 VPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXX 242
T++L K +F ++ M + ++ +DI YN L G+
Sbjct: 220 -------TLLLSSYLKGQFEL-GEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVN 271
Query: 243 XXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLL 302
D ++FN MIRG EG +DEAE + ++G P++ ++ + + +
Sbjct: 272 LFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMC 331
Query: 303 RKLDISRSEKYLQIMKCKGFPVDANTTELLI 333
+ D + + + K + V T + L+
Sbjct: 332 KAGDFESAIELFKETFSKRYLVGQTTLQQLV 362
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 85/170 (50%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
+KG++P IV++N L+ + G+++ G + +M++K V D++T++ + G E
Sbjct: 208 NKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSK 267
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
+ G + G++P+V ++N++I G +M+EA + +V+ G P T+ L+
Sbjct: 268 ELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLL 327
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKEL 173
CK D + AI L E ++ T LV + K A+E+
Sbjct: 328 PAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEI 377
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 99/183 (54%), Gaps = 4/183 (2%)
Query: 29 EGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLI 88
E +L + + V D +++++ F +G ++ A ++ M VG+ P+V+TY S+I
Sbjct: 148 EALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMI 207
Query: 89 GGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEG-- 146
GYC ++++A ++ M + C+ + VTY+ ++ G CK D++RA+ LL EM E
Sbjct: 208 NGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGG 267
Query: 147 --LKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSE 204
+ P+ VT+T ++ FC+ + A + M G +PN T V++ G+ + +
Sbjct: 268 GLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVK 327
Query: 205 AMS 207
A+S
Sbjct: 328 ALS 330
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 117/237 (49%), Gaps = 13/237 (5%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+ P +++Y +I G G+ + L EM + + + T+S +++G K G + A
Sbjct: 195 GLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERA 254
Query: 66 RCVMGFMVHVG----VEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNS 121
++ M + PN VTY +I +C + ++EEA+ V D M RGC+P+ VT
Sbjct: 255 LELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACV 314
Query: 122 LIHGWCKVKDVDRAICLLGEMVNEGLKPDVVT----WTALVGGFCQVGKPLAAKELFFTM 177
LI G V + D + L +++++ +K V+ +++ ++ + A+++F M
Sbjct: 315 LIQG---VLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLM 371
Query: 178 KEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDID--LDIVVYNVMLDGMC 232
G P+ C+ + L + + L++ +EK D+ +D ++ V+L G+C
Sbjct: 372 LVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGLC 428
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 81/187 (43%), Gaps = 31/187 (16%)
Query: 116 VVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFF 175
V YN +I + D++ A L+ EM GL PDV+T+T+++ G+C GK A L
Sbjct: 165 TVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAK 224
Query: 176 TMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXX 235
M +H V N T + IL+G+ K A+ L MEK D
Sbjct: 225 EMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKED------------------- 265
Query: 236 XXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYN 295
+ T+ ++I+ C + ++EA +L RM GC PNR +
Sbjct: 266 ------------GGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTAC 313
Query: 296 VFVHGLL 302
V + G+L
Sbjct: 314 VLIQGVL 320
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 91/179 (50%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G++ N LI+GL + G + LL E Q+ P+V TFS L+ GF +G A
Sbjct: 197 GVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEA 256
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ M +EP+ +T+N LI G + ++EE + + + M +GC P+ TY +++G
Sbjct: 257 FKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYG 316
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
K A ++ +M++ G++P +++ +V G C+ + + M HG VP
Sbjct: 317 LLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVP 375
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 83/159 (52%), Gaps = 2/159 (1%)
Query: 8 QPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARC 67
+P +++++ LI+G G+++E LL M ++ + PD TF+IL+ G K+G V
Sbjct: 234 RPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGID 293
Query: 68 VMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWC 127
++ M G EPN TY ++ G + + EA ++ M+ G PS ++Y ++ G C
Sbjct: 294 LLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLC 353
Query: 128 KVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGK 166
+ K V +L +MVN G P + W +V C V K
Sbjct: 354 ETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQ--CVVSK 390
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%)
Query: 25 GRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTY 84
GR +L+ M G P ++F+ +++ L + +GVE +
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCL 205
Query: 85 NSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVN 144
N LI G C +E A+++ D ++ P+V+T++ LI G+C + A LL M
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 145 EGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSE 204
E ++PD +T+ L+ G + G+ +L MK G PN T +L GL + + E
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE 325
Query: 205 AMSLFRAMEKSDIDLDIVVYNVMLDGMC 232
A + M + + Y M+ G+C
Sbjct: 326 AKEMMSQMISWGMRPSFLSYKKMVLGLC 353
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G P+ S+N ++ L + E + + GV D +IL+ G + G + A
Sbjct: 162 GCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAA 221
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ PNV+T++ LI G+C + + EEA K+ + M + P +T+N LI G
Sbjct: 222 LQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISG 281
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
K V+ I LL M +G +P+ T+ ++ G + L AKE+ M G P+
Sbjct: 282 LRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPS 341
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAM 212
+ ++ GL + + E + R M
Sbjct: 342 FLSYKKMVLGLCETKSVVEMDWVLRQM 368
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%)
Query: 164 VGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVV 223
G+ A E+ F M + G P+ ++ IL+ L + E +F + K +++D
Sbjct: 145 AGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACC 204
Query: 224 YNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRME 283
N+++ G+C + TF+ +IRG C +G +EA +LL RME
Sbjct: 205 LNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERME 264
Query: 284 ENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKG 321
+ P+ ++N+ + GL +K + L+ MK KG
Sbjct: 265 KERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKG 302
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 123/311 (39%), Gaps = 9/311 (2%)
Query: 39 QKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNV-----VTYNSLIGGYCL 93
+K P ++++++ FG+ + VM + +E YN + L
Sbjct: 88 RKDYQPTESLYALMINKFGQAKMYDEIEEVMR---TIKLEKRCRFSEEFFYNLMRIYGNL 144
Query: 94 RHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVT 153
++ A+++ M GC PS ++N +++ K D + G++ D
Sbjct: 145 AGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACC 204
Query: 154 WTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAME 213
L+ G C+ G AA +L + PN+ T + ++ G EA L ME
Sbjct: 205 LNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERME 264
Query: 214 KSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLD 273
K I+ D + +N+++ G+ + T+ ++ GL +
Sbjct: 265 KERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNL 324
Query: 274 EAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGF-PVDANTTELL 332
EA+E++ +M G P+ SY V GL + + L+ M GF P +++
Sbjct: 325 EAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVV 384
Query: 333 ICIYSANKGDN 343
C+ S N D+
Sbjct: 385 QCVVSKNNDDS 395
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 84/168 (50%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
I+P + SYN LI+GL G + E L+ E+ KG+ PD TF+IL+ +G
Sbjct: 172 SIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEG 231
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ MV V+ ++ +YN+ + G + ++ EE + +FD + P V T+ ++I G
Sbjct: 232 EQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKG 291
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKEL 173
+ +D AI E+ G +P + +L+ C+ G +A EL
Sbjct: 292 FVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYEL 339
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 107/250 (42%), Gaps = 2/250 (0%)
Query: 97 MEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNE-GLKPDVVTWT 155
E A KVFD M R C + +++N+L++ K D + E+ + ++PDV ++
Sbjct: 122 FENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYN 181
Query: 156 ALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKS 215
L+ G C G A L ++ G P+ T ++L + E ++ M +
Sbjct: 182 TLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEK 241
Query: 216 DIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEA 275
++ DI YN L G+ D +TF MI+G EG LDEA
Sbjct: 242 NVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEA 301
Query: 276 EELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVD-ANTTELLIC 334
+E+NGC P + +N + + + D+ + + + + K VD A E++
Sbjct: 302 ITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDA 361
Query: 335 IYSANKGDNA 344
+ +K D A
Sbjct: 362 LVKGSKQDEA 371
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 85/170 (50%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
+KG++P +++N L+ + G+++EG + M++K V D+++++ + G E
Sbjct: 205 NKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSE 264
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
+ + ++P+V T+ ++I G+ +++EA+ + + + GC P +NSL+
Sbjct: 265 EMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLL 324
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKEL 173
CK D++ A L E+ + L D +V + K A+E+
Sbjct: 325 PAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEI 374
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 80/158 (50%), Gaps = 1/158 (0%)
Query: 10 TIVSYNCLIQGLFKFGRWKEGAGLLYEMMQK-GVMPDVQTFSILVDGFGKEGLVSGARCV 68
T +S+N L+ ++ G+ E+ K + PDV +++ L+ G +G + A +
Sbjct: 140 TALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVAL 199
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
+ + + G++P+ +T+N L+ + + EE +++ MV + + +YN+ + G
Sbjct: 200 IDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAM 259
Query: 129 VKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGK 166
+ + L ++ LKPDV T+TA++ GF GK
Sbjct: 260 ENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGK 297
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 141/345 (40%), Gaps = 2/345 (0%)
Query: 8 QPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARC 67
QP +Y L+ L K G+ L EM+++G+ P V+ ++ L+ + + L+ A
Sbjct: 121 QPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFS 180
Query: 68 VMGFMVHVGV-EPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGW 126
++ M +P+V TY++L+ Q + ++ M R P+ VT N ++ G+
Sbjct: 181 ILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGY 240
Query: 127 CKVKDVDRAICLLGEM-VNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+V D+ +L +M V+ KPDV T ++ F +GK + + + G P
Sbjct: 241 GRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPE 300
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+T +++ K R + + S+ M K + YN +++
Sbjct: 301 TRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFD 360
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
DT TF +I G GL + + + P N YN + +
Sbjct: 361 QMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVISACAKAD 420
Query: 306 DISRSEKYLQIMKCKGFPVDANTTELLICIYSANKGDNAFQELQQ 350
D+ E+ MK + D+ T E+++ Y ++ L+Q
Sbjct: 421 DLIEMERVYIRMKERQCVCDSRTFEIMVEAYEKEGMNDKIYYLEQ 465
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 1/164 (0%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMM-QKGVMPDVQTFSILVDGFGKEGL 61
+ + I P V+ N ++ G + GR+ + +L +M+ PDV T +I++ FG G
Sbjct: 222 DERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGK 281
Query: 62 VSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNS 121
+ + G+EP T+N LIG Y + ++ V + M + + TYN+
Sbjct: 282 IDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNN 341
Query: 122 LIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVG 165
+I + V D +M +EG+K D T+ L+ G+ G
Sbjct: 342 IIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAG 385
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 117/278 (42%), Gaps = 38/278 (13%)
Query: 14 YNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMV 73
+N +++G K G W + +M +GV D+ ++SI +D K G A + M
Sbjct: 192 HNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMK 251
Query: 74 HVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVD 133
++ +VV YN++I +E ++VF M RGC P+V T+N++I C+ +
Sbjct: 252 SRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMR 311
Query: 134 RAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVIL 193
A +L EM G +PD +T+ L F ++ KP LF M G P + T +++
Sbjct: 312 DAYRMLDEMPKRGCQPDSITYMCL---FSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLM 368
Query: 194 DGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXX 253
+ F + +++ M++S D YN ++D
Sbjct: 369 RKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDA----------------------- 405
Query: 254 FDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNR 291
L +G+LD A E M E G P R
Sbjct: 406 ------------LIQKGMLDMAREYEEEMIERGLSPRR 431
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 97/197 (49%), Gaps = 5/197 (2%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFG-KEGL 61
+++G+ + SY+ + + K G+ + L EM + + DV ++ ++ G +G+
Sbjct: 216 DTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGV 275
Query: 62 VSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNS 121
G R V M G EPNV T+N++I C +M +A ++ D M +RGC P +TY
Sbjct: 276 EFGIR-VFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMC 334
Query: 122 LIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHG 181
L +++ + L G M+ G++P + T+ L+ F + G ++ TMKE G
Sbjct: 335 LF---SRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESG 391
Query: 182 QVPNLQTCTVILDGLFK 198
P+ ++D L +
Sbjct: 392 DTPDSAAYNAVIDALIQ 408
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 121/296 (40%), Gaps = 13/296 (4%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
+ K + + Y+ Q +F W E + G +TF+ ++D GK
Sbjct: 46 DQKTVCEALTCYSNDWQKALEFFNWVE--------RESGFRHTTETFNRVIDILGKYFEF 97
Query: 63 SGARCVMGFMV-HVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNS 121
+ ++ M+ + PN VT+ + Y H ++EA+ +D + YN
Sbjct: 98 EISWALINRMIGNTESVPNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYN- 156
Query: 122 LIHGWCKVKDVDRA--ICLLGEMVNEGLK-PDVVTWTALVGGFCQVGKPLAAKELFFTMK 178
L+ C+ K V A +C ++ G + ++ G+ ++G KE + M
Sbjct: 157 LVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMD 216
Query: 179 EHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXX 238
G +L + ++ +D + K +A+ L++ M+ + LD+V YN ++ +
Sbjct: 217 TEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVE 276
Query: 239 XXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSY 294
+ T N +I+ LC +G + +A +L M + GC P+ +Y
Sbjct: 277 FGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITY 332
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 82/164 (50%), Gaps = 15/164 (9%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG-- 60
+ +G+ V+Y LIQGLF+ G + EM+ GV PD+ T++IL+DG K G
Sbjct: 8 SQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKL 67
Query: 61 ---LVSGAR-------CVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRR 110
LV+G C + GV+PNVVTY ++I G+C + EEA +F M
Sbjct: 68 EKALVAGKVEDGWDLFCSLSLK---GVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKED 124
Query: 111 GCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTW 154
G LP TYN+LI + D + L+ EM + D T+
Sbjct: 125 GPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY 168
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 79/167 (47%), Gaps = 9/167 (5%)
Query: 72 MVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKD 131
M G+ N VTY +LI G + A ++F MV G P ++TYN L+ G CK
Sbjct: 7 MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGK 66
Query: 132 VDRAIC---------LLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
+++A+ L + +G+KP+VVT+T ++ GFC+ G A LF MKE G
Sbjct: 67 LEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGP 126
Query: 183 VPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLD 229
+P+ T ++ + + + L + M D Y ++ D
Sbjct: 127 LPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 173
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 87/178 (48%), Gaps = 9/178 (5%)
Query: 33 LLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYC 92
L EM Q+G++ + T++ L+ G + G A+ + MV GV P+++TYN L+ G C
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLC 62
Query: 93 LRHQMEEAM---------KVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMV 143
++E+A+ +F + +G P+VVTY ++I G+CK + A L +M
Sbjct: 63 KNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMK 122
Query: 144 NEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRF 201
+G PD T+ L+ + G A+ EL M+ + T ++ D L R
Sbjct: 123 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRL 180
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 82/186 (44%), Gaps = 9/186 (4%)
Query: 172 ELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGM 231
ELF M + G V N T T ++ GLF+ A +F+ M + DI+ YN++LDG+
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 232 CXXXXXXXXXXXXX---------XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRM 282
C + T+ MI G C +G +EA L +M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 283 EENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLICIYSANKGD 342
+E+G P+ +YN + LR D + S + ++ M+ F DA+T L+ + + D
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRLD 181
Query: 343 NAFQEL 348
F E+
Sbjct: 182 KGFLEM 187
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 75/137 (54%), Gaps = 9/137 (6%)
Query: 101 MKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGG 160
M++F M +RG + + VTY +LI G + D D A + EMV++G+ PD++T+ L+ G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 161 FCQVGK----PLAAK-----ELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRA 211
C+ GK +A K +LF ++ G PN+ T T ++ G K F EA +LFR
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 212 MEKSDIDLDIVVYNVML 228
M++ D YN ++
Sbjct: 121 MKEDGPLPDSGTYNTLI 137
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 118/286 (41%), Gaps = 7/286 (2%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
MK+ +P + ++ LI K GR+ ++ EM GV T++ ++DG+GK G
Sbjct: 205 MKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAG 264
Query: 61 LVSGARCVMGFMVHVGVE-PNVVTYNSLIGGYC---LRHQMEEAMKVFDLMVRRGCLPSV 116
+ V+ M+ G P+V T NS+IG Y +ME F LM G P +
Sbjct: 265 MFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLM---GVQPDI 321
Query: 117 VTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFT 176
T+N LI + K + ++ M VT+ ++ F + G+ ++F
Sbjct: 322 TTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRK 381
Query: 177 MKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXX 236
MK G PN T +++ K + S+ R + SD+ LD +N +++
Sbjct: 382 MKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGD 441
Query: 237 XXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRM 282
D TF MI+ G+ D +EL +M
Sbjct: 442 LATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQM 487
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 2/210 (0%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQ-KGVMPDVQTFSILVDGFGKEGLVSGARC 67
P + + N +I G + GR Y Q GV PD+ TF+IL+ FGK G+
Sbjct: 284 PDVCTLNSII-GSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCS 342
Query: 68 VMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWC 127
VM FM VTYN +I + ++E+ VF M +G P+ +TY SL++ +
Sbjct: 343 VMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYS 402
Query: 128 KVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQ 187
K V + +L ++VN + D + ++ + Q G KEL+ M+E P+
Sbjct: 403 KAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKI 462
Query: 188 TCTVILDGLFKCRFHSEAMSLFRAMEKSDI 217
T ++ L + M SDI
Sbjct: 463 TFATMIKTYTAHGIFDAVQELEKQMISSDI 492
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 108/264 (40%), Gaps = 6/264 (2%)
Query: 78 EPNVVTYNSL--IGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRA 135
EP TY L + G C Q ++A +F++M+ G P++ Y SLI + K + +D+A
Sbjct: 141 EPRCKTYTKLFKVLGNC--KQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKA 198
Query: 136 ICLLGEMVN-EGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILD 194
L M + KPDV T+T L+ C++G+ K + M G + T I+D
Sbjct: 199 FSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIID 258
Query: 195 GLFKCRFHSEAMSLFRAM-EKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXX 253
G K E S+ M E D D+ N ++
Sbjct: 259 GYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQ 318
Query: 254 FDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKY 313
D TFNI+I G+ + ++ ME+ +YN+ + + I + +
Sbjct: 319 PDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDV 378
Query: 314 LQIMKCKGFPVDANTTELLICIYS 337
+ MK +G ++ T L+ YS
Sbjct: 379 FRKMKYQGVKPNSITYCSLVNAYS 402
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 151/334 (45%), Gaps = 6/334 (1%)
Query: 8 QPTIVSYNCLIQGLFKFGRWKEGAGLLY--EMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
+PT +Y +I+ L K + + + +LY E+ +K P+ F ++ +G G + A
Sbjct: 69 EPTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPE-SIFRDVIAAYGFSGRIEEA 127
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQ-MEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
V + + P+ T N+L+ + Q +E ++ R G T+ LI
Sbjct: 128 IEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILID 187
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFF--TMKEHGQ 182
C++ +VD A L+ M + + D ++ L+ C+ + + +++
Sbjct: 188 ALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRF 247
Query: 183 VPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXX 242
P L+ TV++ L + E +S+ M+ ++ D+V Y ++L G+
Sbjct: 248 SPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADK 307
Query: 243 XXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLL 302
D YT+N+ I GLC + ++ A +++ M + G PN +YN+ + L+
Sbjct: 308 LFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALV 367
Query: 303 RKLDISRSEKYLQIMKCKGFPVDANTTELLICIY 336
+ D+SR++ + M+ G +++T +++I Y
Sbjct: 368 KAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAY 401
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 80/168 (47%)
Query: 7 IQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGAR 66
++P +V Y ++QG+ + + L E++ G+ PDV T+++ ++G K+ + GA
Sbjct: 282 VEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGAL 341
Query: 67 CVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGW 126
+M M +G EPNVVTYN LI + A ++ M G + T++ +I +
Sbjct: 342 KMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAY 401
Query: 127 CKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELF 174
+V +V A LL E N + ++ C+ G A EL
Sbjct: 402 IEVDEVVCAHGLLEEAFNMNVFVKSSRIEEVISRLCEKGLMDQAVELL 449
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 118/282 (41%), Gaps = 8/282 (2%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G++ ++ LI L + G L+ M Q V+ D + +S L+ K +
Sbjct: 174 GVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKH---KDS 230
Query: 66 RC--VMGFMVHVG---VEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
C V+G++ + P + Y ++ + +E + V + M P +V Y
Sbjct: 231 SCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYT 290
Query: 121 SLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEH 180
++ G +D +A L E++ GL PDV T+ + G C+ A ++ +M +
Sbjct: 291 IVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKL 350
Query: 181 GQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXX 240
G PN+ T +++ L K S A +L++ ME + ++ + +++M+
Sbjct: 351 GSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCA 410
Query: 241 XXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRM 282
+ +I LC +GL+D+A ELL +
Sbjct: 411 HGLLEEAFNMNVFVKSSRIEEVISRLCEKGLMDQAVELLAHL 452
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 88/157 (56%), Gaps = 1/157 (0%)
Query: 7 IQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQK-GVMPDVQTFSILVDGFGKEGLVSGA 65
I+P ++N ++ ++ G + + EM ++ G P+V ++++L++ + GL+S A
Sbjct: 241 IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEA 300
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
V M GV ++V YN++IGG C ++ +A ++F M +G + +TY L++G
Sbjct: 301 EKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNG 360
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFC 162
+CK DVD + + EM +G + D +T ALV G C
Sbjct: 361 YCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLC 397
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 133/316 (42%), Gaps = 53/316 (16%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQK-----------------GVMPD 45
S+GI I + N LI + + + GA Y+M ++ + P+
Sbjct: 189 RSRGINAQISTCNALITEVSR----RRGASNGYKMYREVFGLDDVSVDEAKKMIGKIKPN 244
Query: 46 VQTFSILVDGFGKEGLVSGARCVMGFMVH-VGVEPNVVTYNSLIGGYCLRHQMEEAMKVF 104
TF+ ++ F +EG + M VG PNV +YN L+ YC R M EA KV+
Sbjct: 245 ATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVW 304
Query: 105 DLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQV 164
+ M RG + +V YN++I G C +V +A L +M +G++ +T+ LV G+C+
Sbjct: 305 EEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKA 364
Query: 165 GKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVY 224
G + ++ MK G + T +++GL R R +E +DI D V
Sbjct: 365 GDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQ------RVVEAADIVKDAVRE 418
Query: 225 NVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEE 284
+ + ++++ LC +G +D A + M
Sbjct: 419 AMFYPS-------------------------RNCYELLVKRLCEDGKMDRALNIQAEMVG 453
Query: 285 NGCPPNRCSYNVFVHG 300
G P++ +Y F+ G
Sbjct: 454 KGFKPSQETYRAFIDG 469
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 88/199 (44%), Gaps = 4/199 (2%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
M+ G P + SYN L++ G E + EM +GV+ D+ ++ ++ G
Sbjct: 271 MEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNF 330
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
V A+ + M G+E +TY L+ GYC ++ + V+ M R+G +T
Sbjct: 331 EVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIE 390
Query: 121 SLIHGWCKVKDVDR---AICLLGEMVNEGL-KPDVVTWTALVGGFCQVGKPLAAKELFFT 176
+L+ G C +D R A ++ + V E + P + LV C+ GK A +
Sbjct: 391 ALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAE 450
Query: 177 MKEHGQVPNLQTCTVILDG 195
M G P+ +T +DG
Sbjct: 451 MVGKGFKPSQETYRAFIDG 469
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/286 (20%), Positives = 114/286 (39%), Gaps = 27/286 (9%)
Query: 72 MVHVGVEPNVVTYNSLIGGYCLR-----HQMEEAMKVFDLMVR--RGCLPSVVTYNSLIH 124
++H+ + ++ S I LR + +KVF +++ C + ++ LI
Sbjct: 111 LIHILSRSRLKSHASEIIRLALRLAATDEDEDRVLKVFRSLIKSYNRCGSAPFVFDLLIK 170
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAA-------KELF--- 174
K++D A+ ++ ++ + G+ + T AL+ +V + A +E+F
Sbjct: 171 SCLDSKEIDGAVMVMRKLRSRGINAQISTCNALI---TEVSRRRGASNGYKMYREVFGLD 227
Query: 175 -FTMKEHGQV-----PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKS-DIDLDIVVYNVM 227
++ E ++ PN T ++ ++ ++R ME+ ++ YNV+
Sbjct: 228 DVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVL 287
Query: 228 LDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGC 287
++ C +D +N MI GLC + +A+EL M G
Sbjct: 288 MEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGI 347
Query: 288 PPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLI 333
+Y V+G + D+ + MK KGF D T E L+
Sbjct: 348 ECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALV 393
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 149/358 (41%), Gaps = 45/358 (12%)
Query: 14 YNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMV 73
YN ++ L K R++E + EM ++ + +T+ +L++ + V A V
Sbjct: 146 YNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRK 205
Query: 74 HVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRR-GCLPSVVTYNSLIHGWCKVKDV 132
G++ ++V ++ L+ C +E A +F R GC + N +++GWC + +V
Sbjct: 206 EFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGC--DIKAMNMILNGWCVLGNV 263
Query: 133 DRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVI 192
A +++ +PDVV++ ++ + GK A EL+ M + + P+++ C +
Sbjct: 264 HEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNV 323
Query: 193 LDGL-FKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXX- 250
+D L FK R EA+ +FR + + D ++V YN +L +C
Sbjct: 324 IDALCFKKRI-PEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKG 382
Query: 251 -XXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCP--------------------- 288
+ TF+ +++ + + + +L RM +N C
Sbjct: 383 GSCSPNDVTFSYLLK---YSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEK 439
Query: 289 --------------PNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELL 332
P++ +Y + +HGL K I + Y Q M KG + T LL
Sbjct: 440 VREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRTEMLL 497
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 102/236 (43%), Gaps = 34/236 (14%)
Query: 11 IVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMG 70
I + N ++ G G E +++ PDV ++ +++ K+G + A +
Sbjct: 247 IKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYR 306
Query: 71 FMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVK 130
M P+V N++I C + ++ EA++VF + +G P+VVTYNSL+ CK++
Sbjct: 307 AMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIR 366
Query: 131 DVDRAICLLGEMVNEG--LKPDVVTWTALVGG---------------------------- 160
++ L+ EM +G P+ VT++ L+
Sbjct: 367 RTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNL 426
Query: 161 ----FCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAM 212
+ Q K +E++ M+ G P+ +T T+ + GL EA+S F+ M
Sbjct: 427 MFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEM 482
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 5/153 (3%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKG--VMPDVQTFSILVDGFGKEG 60
+ KG P +V+YN L++ L K R ++ L+ EM KG P+ TFS L+ +
Sbjct: 344 SEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSK 403
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
V V+ M E YN + Y + E+ +++ M R G P TY
Sbjct: 404 DVD---IVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYT 460
Query: 121 SLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVT 153
IHG + A+ EM+++G+ P+ T
Sbjct: 461 IRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRT 493
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 128/291 (43%), Gaps = 1/291 (0%)
Query: 15 NCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGK-EGLVSGARCVMGFMV 73
N ++ L K G+ L +M + G+ PDV T++ L+ G K + A ++G +
Sbjct: 170 NSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELP 229
Query: 74 HVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVD 133
H G++ + V Y +++ + EEA M G P++ Y+SL++ + D
Sbjct: 230 HNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYK 289
Query: 134 RAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVIL 193
+A L+ EM + GL P+ V T L+ + + G ++EL ++ G N +++
Sbjct: 290 KADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLM 349
Query: 194 DGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXX 253
DGL K EA S+F M+ + D ++M+ +C
Sbjct: 350 DGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEK 409
Query: 254 FDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
D N M+ C G ++ ++ +M+E P+ ++++ + +++
Sbjct: 410 CDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKE 460
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 140/338 (41%), Gaps = 38/338 (11%)
Query: 15 NCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVH 74
N +++ GRW++ L M Q G + V T+S + G + VS A + +
Sbjct: 102 NVILRDFGISGRWQDLIQLFEWMQQHGKI-SVSTYSSCIKFVGAKN-VSKALEIYQSIPD 159
Query: 75 VGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKD-VD 133
+ NV NS++ +++ +K+FD M R G P VVTYN+L+ G KVK+
Sbjct: 160 ESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYP 219
Query: 134 RAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVIL 193
+AI L+GE+ + G++ D V + ++ G+ A+ MK G PN+ + +L
Sbjct: 220 KAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLL 279
Query: 194 DGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXX 253
+ + +A L M+ + +V VM+
Sbjct: 280 NSYSWKGDYKKADELMTEMK----SIGLVPNKVMM------------------------- 310
Query: 254 FDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKY 313
T + I+G GL D + ELL +E G N Y + + GL + + +
Sbjct: 311 --TTLLKVYIKG----GLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSI 364
Query: 314 LQIMKCKGFPVDANTTELLICIYSANKGDNAFQELQQN 351
MK KG D ++I +K +EL ++
Sbjct: 365 FDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRD 402
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 84/198 (42%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G P I Y+ L+ G +K+ L+ EM G++P+ + L+ + K GL
Sbjct: 266 EGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDR 325
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
+R ++ + G N + Y L+ G ++EEA +FD M +G + +I
Sbjct: 326 SRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMIS 385
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
C+ K A L + K D+V ++ +C+ G+ + + M E P
Sbjct: 386 ALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSP 445
Query: 185 NLQTCTVILDGLFKCRFH 202
+ T +++ K + H
Sbjct: 446 DYNTFHILIKYFIKEKLH 463
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 106/281 (37%), Gaps = 35/281 (12%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
GIQ V Y ++ GR +E + +M +G P++ +S L++ + +G A
Sbjct: 232 GIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKA 291
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+M M +G+ PN V +L+ Y +G L
Sbjct: 292 DELMTEMKSIGLVPNKVMMTTLLKVYI-----------------KGGL------------ 322
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
DR+ LL E+ + G + + + L+ G + GK A+ +F MK G +
Sbjct: 323 ------FDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSD 376
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
++++ L + + EA L R E + D+V+ N ML C
Sbjct: 377 GYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMK 436
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENG 286
D TF+I+I+ E L A + + M G
Sbjct: 437 KMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKG 477
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 120/310 (38%), Gaps = 44/310 (14%)
Query: 10 TIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVM 69
T+VS+N + + FG + GL M+++ PD+ TF L ++ R +
Sbjct: 220 TVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIH 279
Query: 70 GFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKV 129
+H+G + ++ N+ I Y A +FD+M R C V++ +I G+ +
Sbjct: 280 SHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTC----VSWTVMISGYAEK 335
Query: 130 KDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHG-QVPNLQT 188
D+D A+ L M+ G KPD+VT +L+ G + G K + +G + N+
Sbjct: 336 GDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMI 395
Query: 189 CTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXX 248
C ++D KC EA +F + +
Sbjct: 396 CNALIDMYSKCGSIHEARDIFDNTPEKTV------------------------------- 424
Query: 249 XXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDIS 308
T+ MI G G+ EA +L +M + PN ++ + +
Sbjct: 425 --------VTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLE 476
Query: 309 RSEKYLQIMK 318
+ +Y IMK
Sbjct: 477 KGWEYFHIMK 486
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 6/205 (2%)
Query: 10 TIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVM 69
T VS+ +I G + G E L + M++ G PD+ T L+ G GK G + + +
Sbjct: 321 TCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWID 380
Query: 70 GFMVHVGVE-PNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
G + NV+ N+LI Y + EA +FD + +VVT+ ++I G+
Sbjct: 381 ARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEK----TVVTWTTMIAGYAL 436
Query: 129 VKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKE-HGQVPNLQ 187
A+ L +M++ KP+ +T+ A++ G E F MK+ + P L
Sbjct: 437 NGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLD 496
Query: 188 TCTVILDGLFKCRFHSEAMSLFRAM 212
+ ++D L + EA+ L R M
Sbjct: 497 HYSCMVDLLGRKGKLEEALELIRNM 521
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 109/219 (49%), Gaps = 1/219 (0%)
Query: 13 SYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFM 72
++ L++ G+ KE L+ E+ K + D + F ILV G + + A ++ M
Sbjct: 331 AFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIM 390
Query: 73 VHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDV 132
++ + V Y +I GY ++ + +A++ F+++ + G P V TY ++ K+K
Sbjct: 391 KRRKLDDSNV-YGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQF 449
Query: 133 DRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVI 192
++ L EM+ G++PD V TA+V G + A ++F +M+E G P ++ ++
Sbjct: 450 EKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIF 509
Query: 193 LDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGM 231
+ L + + E + +F M S I + +++ ++ M
Sbjct: 510 VKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSM 548
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 83/188 (44%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCV 68
P V+Y+ I+ L + G+ +E L + + D T+ +V G + G + A
Sbjct: 817 PVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDK 876
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
+ M +G +P V Y SLI + Q+E+ ++ M C PSVVTY ++I G+
Sbjct: 877 VNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMS 936
Query: 129 VKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQT 188
+ V+ A M G PD T++ + CQ K A +L M + G P+
Sbjct: 937 LGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTIN 996
Query: 189 CTVILDGL 196
+ GL
Sbjct: 997 FRTVFYGL 1004
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 127/321 (39%), Gaps = 38/321 (11%)
Query: 27 WKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNS 86
+K+ L YEM ++G + T++I++ +G+ GL + A M +G+ P+ T+
Sbjct: 694 FKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKC 753
Query: 87 LIGGYCLR--HQMEEAMKVFDLMVRRG--------------------------CL----- 113
LI C + +EEA + F M+R G CL
Sbjct: 754 LITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGK 813
Query: 114 ---PSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAA 170
P V Y+ I C++ ++ A+ L E D T+ ++V G Q G A
Sbjct: 814 IGFPVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKA 873
Query: 171 KELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDG 230
+ +MKE G P + T ++ FK + + + + ME + +V Y M+ G
Sbjct: 874 LDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICG 933
Query: 231 MCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPN 290
D T++ I LC ++A +LL M + G P+
Sbjct: 934 YMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPS 993
Query: 291 RCSYNVFVHGLLR--KLDISR 309
++ +GL R K D++R
Sbjct: 994 TINFRTVFYGLNREGKHDLAR 1014
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 76/159 (47%)
Query: 13 SYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFM 72
+Y ++ GL + G ++ + M + G P V ++ L+ F KE + M
Sbjct: 856 TYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKM 915
Query: 73 VHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDV 132
EP+VVTY ++I GY ++EEA F M RG P TY+ I+ C+
Sbjct: 916 EGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKS 975
Query: 133 DRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAK 171
+ A+ LL EM+++G+ P + + + G + GK A+
Sbjct: 976 EDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKHDLAR 1014
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 132/314 (42%), Gaps = 44/314 (14%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G + +YN +I+ L GR EMM+KG+ ++T+ +L+D K V
Sbjct: 254 GFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVV 313
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVF-DLMVRRGCLPSVVTYNSLIH 124
+ + MV + + L+ +C+ +++EA+++ +L + CL + + L+
Sbjct: 314 QSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKY-FEILVK 372
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G C+ + A+ ++ M L D + ++ G+ + A E F +K+ G+ P
Sbjct: 373 GLCRANRMVDALEIVDIMKRRKL-DDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPP 431
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
+ T T I+ LFK + + +LF M ++ I+ D V
Sbjct: 432 RVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVA--------------------- 470
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
++ G + + EA ++ MEE G P SY++FV
Sbjct: 471 --------------ITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVK----- 511
Query: 305 LDISRSEKYLQIMK 318
++ RS +Y +I+K
Sbjct: 512 -ELCRSSRYDEIIK 524
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G P + +Y ++Q LFK ++++G L EM++ G+ PD + +V G + V+ A
Sbjct: 428 GRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEA 487
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLM 107
V M G++P +Y+ + C + +E +K+F+ M
Sbjct: 488 WKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQM 529
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 55/120 (45%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G +P + Y LI FK + ++ +M + P V T++ ++ G+ G V A
Sbjct: 884 GTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEA 943
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
M G P+ TY+ I C + E+A+K+ M+ +G PS + + ++ +G
Sbjct: 944 WNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYG 1003
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 109/281 (38%), Gaps = 7/281 (2%)
Query: 76 GVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRA 135
G + N YN I ++ +F M R+GCL + T+ +I + + + A
Sbjct: 673 GYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIA 732
Query: 136 ICLLGEMVNEGLKPDVVTWTALVGGFCQ-VGKPL-AAKELFFTMKEHGQVPNLQTCTVIL 193
I EM + GL P T+ L+ C+ G+ + A F M G VP+ + L
Sbjct: 733 IRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYL 792
Query: 194 DGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXX 253
L + +A S ++ K + V Y++ + +C
Sbjct: 793 GCLCEVGNTKDAKSCLDSLGKIGFPV-TVAYSIYIRALCRIGKLEEALSELASFEGERSL 851
Query: 254 FDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKY 313
D YT+ ++ GL G L +A + + M+E G P Y + ++ + + +
Sbjct: 852 LDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLET 911
Query: 314 LQIMKCKGFPVDANTTELLICIY----SANKGDNAFQELQQ 350
Q M+ + T +IC Y + NAF+ +++
Sbjct: 912 CQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEE 952
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 106/219 (48%)
Query: 12 VSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGF 71
+ Y+ ++ K G + EM+Q+G + +++ V ++G V A ++
Sbjct: 305 IGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSE 364
Query: 72 MVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKD 131
M GV P T+N LIGG+ E+ ++ ++MV RG +PS +N ++ K+++
Sbjct: 365 MEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIEN 424
Query: 132 VDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTV 191
V+RA +L + +++G PD T++ L+ GF + A +LF+ M+ P +
Sbjct: 425 VNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRS 484
Query: 192 ILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDG 230
++ GL C + M+K I+ + +Y+ ++
Sbjct: 485 LIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKA 523
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 85/195 (43%), Gaps = 4/195 (2%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G Y ++ + G KE LL EM + GV P +TF+ L+ GF + G
Sbjct: 333 RGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEK 392
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
MV G+ P+ +N ++ + A ++ + +G +P TY+ LI
Sbjct: 393 GLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIR 452
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G+ + D+D+A+ L EM + P + +L+ G C GK A ++ MK+ P
Sbjct: 453 GFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEP 512
Query: 185 NLQTCTVILDGLFKC 199
N I D L K
Sbjct: 513 NAD----IYDALIKA 523
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 85/174 (48%), Gaps = 4/174 (2%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLY--EMMQKGVMPDVQTFSILVDGFGKEGLVS 63
G+ P ++NCLI G +FG W+E GL Y M+ +G+MP F+ +V K V+
Sbjct: 369 GVSPYDETFNCLIGGFARFG-WEE-KGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVN 426
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A ++ + G P+ TY+ LI G+ + +++A+K+F M R P + SLI
Sbjct: 427 RANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLI 486
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTM 177
G C V+ L M ++P+ + AL+ F ++G A ++ M
Sbjct: 487 VGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEM 540
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 98/224 (43%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCV 68
P+++ L+ + + R +E LL ++ K ++ D +SI+V KEG + AR V
Sbjct: 267 PSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKV 326
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
M+ G N Y + C + ++EA ++ M G P T+N LI G+ +
Sbjct: 327 FDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFAR 386
Query: 129 VKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQT 188
++ + MV GL P + +V ++ A E+ + G VP+ T
Sbjct: 387 FGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHT 446
Query: 189 CTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMC 232
+ ++ G + +A+ LF ME + V+ ++ G+C
Sbjct: 447 YSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLC 490
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 133/348 (38%), Gaps = 39/348 (11%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
K I P ++ +IQ L K GR KE LL + K +P V + LV +E +
Sbjct: 228 KRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEE 287
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
+ ++ ++ + + + Y+ ++ + A KVFD M++RG + Y +
Sbjct: 288 SMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVR 347
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
C+ DV A LL EM G+ P T+ L+GGF + G E M G +P
Sbjct: 348 VCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMP 407
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
+ ++ + K + A + ID V
Sbjct: 408 SCSAFNEMVKSVSKIENVNRANEIL----TKSIDKGFVP--------------------- 442
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
D +T++ +IRG +D+A +L ME P + + GL
Sbjct: 443 ----------DEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTC 492
Query: 305 LDISRSEKYLQIMKCKGFPVDANTTELLICIYS----ANKGDNAFQEL 348
+ EKYL+IMK + +A+ + LI + D + E+
Sbjct: 493 GKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEM 540
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 69/141 (48%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
++G+ P+ ++N +++ + K +L + + KG +PD T+S L+ GF + +
Sbjct: 402 TRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDID 461
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A + M + + P + SLI G C ++E K +M +R P+ Y++LI
Sbjct: 462 QALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALI 521
Query: 124 HGWCKVKDVDRAICLLGEMVN 144
+ K+ D A + EM++
Sbjct: 522 KAFQKIGDKTNADRVYNEMIS 542
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 97/198 (48%), Gaps = 3/198 (1%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGK-EGLV 62
+ G++P V+ + ++ L + GR E L+ E+ +K PD T++ L+ K + L
Sbjct: 152 NNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLH 211
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
V V+P++V++ LI C + EAM + + G P YN++
Sbjct: 212 VVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTI 271
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
+ G+C + A+ + +M EG++PD +T+ L+ G + G+ A+ TM + G
Sbjct: 272 MKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGY 331
Query: 183 VPNLQTCTVILDGLFKCR 200
P+ T T +++G+ CR
Sbjct: 332 EPDTATYTSLMNGM--CR 347
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 1/162 (0%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQK-GVMPDVQTFSILVDGFGKEGLVS 63
K P +YN L++ L K + EM V PD+ +F+IL+D +
Sbjct: 188 KHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLR 247
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A ++ + + G +P+ YN+++ G+C + EA+ V+ M G P +TYN+LI
Sbjct: 248 EAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLI 307
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVG 165
G K V+ A L MV+ G +PD T+T+L+ G C+ G
Sbjct: 308 FGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 107/255 (41%), Gaps = 5/255 (1%)
Query: 84 YNSLIGGYCLRHQMEEAMKVFD--LMVRRGCLPSVVTYNSLIHGWCKVKD--VDRAICLL 139
+NS++ Y + + +K+F L + P T+ L+ C+ D + +L
Sbjct: 88 HNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVL 147
Query: 140 GEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKC 199
MVN GL+PD VT V C+ G+ AK+L + E P+ T +L L KC
Sbjct: 148 NLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKC 207
Query: 200 RFHSEAMSLFRAMEKS-DIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYT 258
+ M D+ D+V + +++D +C D +
Sbjct: 208 KDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFL 267
Query: 259 FNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMK 318
+N +++G C EA + +M+E G P++ +YN + GL + + + YL+ M
Sbjct: 268 YNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMV 327
Query: 319 CKGFPVDANTTELLI 333
G+ D T L+
Sbjct: 328 DAGYEPDTATYTSLM 342
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 110/262 (41%), Gaps = 5/262 (1%)
Query: 14 YNCLIQGLFKFGRWKEGAGLLYEMM--QKGVMPDVQTFSILVDGF--GKEGLVSGARCVM 69
+N ++Q + L ++ Q P TF IL+ + +S V+
Sbjct: 88 HNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVL 147
Query: 70 GFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKV 129
MV+ G+EP+ VT + + C +++EA + + + P TYN L+ CK
Sbjct: 148 NLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKC 207
Query: 130 KDVDRAICLLGEMVNE-GLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQT 188
KD+ + EM ++ +KPD+V++T L+ C A L + G P+
Sbjct: 208 KDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFL 267
Query: 189 CTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXX 248
I+ G SEA+ +++ M++ ++ D + YN ++ G+
Sbjct: 268 YNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMV 327
Query: 249 XXXXXFDTYTFNIMIRGLCWEG 270
DT T+ ++ G+C +G
Sbjct: 328 DAGYEPDTATYTSLMNGMCRKG 349
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 117/293 (39%), Gaps = 6/293 (2%)
Query: 18 IQGLFKFGRWKEGAGLLYEMMQKGVMP-DVQTFSILVDGFGKEGLVSGARCVMGFMV--H 74
++ FK + L + +P D++ + ++ +G +V+ + ++
Sbjct: 56 LRNPFKSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQ 115
Query: 75 VGVEPNVVTYNSLIGGYCLR--HQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDV 132
P T+ L+ C + +V +LMV G P VT + + C+ V
Sbjct: 116 PNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRV 175
Query: 133 DRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV-PNLQTCTV 191
D A L+ E+ + PD T+ L+ C+ E M++ V P+L + T+
Sbjct: 176 DEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTI 235
Query: 192 ILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXX 251
++D + + EAM L + + D +YN ++ G C
Sbjct: 236 LIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEG 295
Query: 252 XXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
D T+N +I GL G ++EA L M + G P+ +Y ++G+ RK
Sbjct: 296 VEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRK 348
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 63/128 (49%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
M++ ++P +VS+ LI + +E L+ ++ G PD ++ ++ GF
Sbjct: 220 MRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLS 279
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
S A V M GVEP+ +TYN+LI G ++EEA MV G P TY
Sbjct: 280 KGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYT 339
Query: 121 SLIHGWCK 128
SL++G C+
Sbjct: 340 SLMNGMCR 347
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 145/338 (42%), Gaps = 3/338 (0%)
Query: 7 IQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGAR 66
+ PT+ ++N L+ + G+L + + G+ D + ++ L+ K G V
Sbjct: 463 LNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMF 522
Query: 67 CVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGW 126
V M + GVE N+ T+ +LI G Q+ +A + ++ + P V +N+LI
Sbjct: 523 EVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISAC 582
Query: 127 CKVKDVDRAICLLGEMVNEG--LKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
+ VDRA +L EM E + PD ++ AL+ C G+ AKE++ + ++G
Sbjct: 583 GQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRG 642
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
+ T+ ++ K A S+++ M++ D+ D V ++ ++D
Sbjct: 643 TPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGIL 702
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
T +++ ++ C +A EL +++ P + N + L
Sbjct: 703 QDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEG 762
Query: 305 LDISRSEKYLQIMKCKGFPVDANTTELLICIYSANKGD 342
+ ++ +YL +K G + T +L+ + S K D
Sbjct: 763 NQLPKAMEYLDEIKTLGLKPNTITYSMLM-LASERKDD 799
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 1/196 (0%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
GI+ T Y + K G W + +M +K V PD FS L+D G ++ A
Sbjct: 639 GIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEA 698
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ G+ ++Y+SL+G C ++A+++++ + P++ T N+LI
Sbjct: 699 FGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITA 758
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
C+ + +A+ L E+ GLKP+ +T++ L+ + + +L K G PN
Sbjct: 759 LCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPN 818
Query: 186 LQTCTVILDGLFKCRF 201
L C I L K RF
Sbjct: 819 LIMCRCIT-SLCKRRF 833
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 121/324 (37%), Gaps = 40/324 (12%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
M NS G++ + ++ LI G + G+ + G + K V PD F+ L+ G+ G
Sbjct: 528 MSNS-GVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSG 586
Query: 61 LVSGARCVMGFM---VHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVV 117
V A V+ M H ++P+ ++ +L+ C Q+E A +V+ ++ + G +
Sbjct: 587 AVDRAFDVLAEMKAETH-PIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPE 645
Query: 118 TYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTM 177
Y ++ K D D A + +M + + PD V ++AL+
Sbjct: 646 VYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALI------------------- 686
Query: 178 KEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXX 237
D + EA + + + I L + Y+ ++ C
Sbjct: 687 ----------------DVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDW 730
Query: 238 XXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVF 297
T N +I LC L +A E L ++ G PN +Y++
Sbjct: 731 KKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSML 790
Query: 298 VHGLLRKLDISRSEKYLQIMKCKG 321
+ RK D S K L K G
Sbjct: 791 MLASERKDDFEVSFKLLSQAKGDG 814
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 109/275 (39%), Gaps = 43/275 (15%)
Query: 44 PDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKV 103
D S L+D + K G V AR V + E ++V +N++I GY Q +EA+ +
Sbjct: 150 SDAFIVSSLIDMYSKFGEVGNARKVFSDLG----EQDLVVFNAMISGYANNSQADEALNL 205
Query: 104 FDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQ 163
M G P V+T+N+LI G+ +++ ++ +L M +G KPDVV+WT+++ G
Sbjct: 206 VKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVH 265
Query: 164 VGKPLAAKELFFTMKEHGQVPN-------LQTCT-------------------------- 190
+ A + F M HG PN L CT
Sbjct: 266 NFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFV 325
Query: 191 --VILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXX 248
+LD KC F SEAM LFR K V +N M+
Sbjct: 326 RSALLDMYGKCGFISEAMILFRKTPKK----TTVTFNSMIFCYANHGLADKAVELFDQME 381
Query: 249 XXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRME 283
D TF ++ GL D + L + M+
Sbjct: 382 ATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQ 416
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 22/197 (11%)
Query: 25 GRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVM----GFMVHVGV--- 77
G ++E EM + G+ +D F L+ +R ++ G M+H V
Sbjct: 96 GYYQESLDFFREMYKDGLK---------LDAFIVPSLLKASRNLLDREFGKMIHCLVLKF 146
Query: 78 --EPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRA 135
E + +SLI Y ++ A KVF + + +V +N++I G+ D A
Sbjct: 147 SYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQ----DLVVFNAMISGYANNSQADEA 202
Query: 136 ICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDG 195
+ L+ +M G+KPDV+TW AL+ GF + E+ M G P++ + T I+ G
Sbjct: 203 LNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISG 262
Query: 196 LFKCRFHSEAMSLFRAM 212
L + +A F+ M
Sbjct: 263 LVHNFQNEKAFDAFKQM 279
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 104/224 (46%), Gaps = 8/224 (3%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G +P +VS+ +I GL + ++ +M+ G+ P+ T L+ +
Sbjct: 248 GYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHG 307
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ + G+ V G+E + ++L+ Y + EAM +F R+ + VT+NS+I
Sbjct: 308 KEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILF----RKTPKKTTVTFNSMIFC 363
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMK-EHGQVP 184
+ D+A+ L +M G K D +T+TA++ G + LF M+ ++ VP
Sbjct: 364 YANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVP 423
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVML 228
L+ ++D L + EA + +AM ++ D+ V+ +L
Sbjct: 424 RLEHYACMVDLLGRAGKLVEAYEMIKAMR---MEPDLFVWGALL 464
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 86/399 (21%), Positives = 152/399 (38%), Gaps = 80/399 (20%)
Query: 4 SKG-IQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
SKG + ++ YN +++ L K +W+ L EM++KG+ P T+ L+D + K GL
Sbjct: 179 SKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLK 238
Query: 63 SGARCVMGFMVHVGVEPNVVT--------------------------------------- 83
A C +G M +G++P+ VT
Sbjct: 239 VHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSS 298
Query: 84 --YNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGW--------------- 126
YN++I Y Q++EA + F M+ G +P+ VT+N++IH +
Sbjct: 299 YTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKT 358
Query: 127 -------------------CKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKP 167
K D++RA EM ++GLKPD V++ L+ F
Sbjct: 359 MKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMV 418
Query: 168 LAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVM 227
A+ L M + + T + + + ++ S F+ + ++ Y+
Sbjct: 419 EEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAG-NMSSEGYSAN 477
Query: 228 LDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGC 287
+D +N+MI+ ++A EL M G
Sbjct: 478 IDAYGERGYLSEAERVFICCQEVNKR-TVIEYNVMIKAYGISKSCEKACELFESMMSYGV 536
Query: 288 PPNRCSYNVFVHGLLRKLDISRSEK-YLQIMKCKGFPVD 325
P++C+YN V +L D+ + YL+ M+ G+ D
Sbjct: 537 TPDKCTYNTLVQ-ILASADMPHKGRCYLEKMRETGYVSD 574
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 106/232 (45%), Gaps = 12/232 (5%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
S G+ P +YN L+Q L +G L +M + G + D + ++ F K G ++
Sbjct: 533 SYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLN 592
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A V MV +EP+VV Y LI + +++AM + M G + V YNSLI
Sbjct: 593 MAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLI 652
Query: 124 HGWCKVKDVDRAICLLGEMV---NEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEH 180
+ KV +D A + +++ N+ PDV T ++ + + A+ +F +MK+
Sbjct: 653 KLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQR 712
Query: 181 GQVPN----LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVML 228
G+ + C +G F+ EA + + M + I D + YN +L
Sbjct: 713 GEANEFTFAMMLCMYKKNGRFE-----EATQIAKQMREMKILTDPLSYNSVL 759
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 124/318 (38%), Gaps = 38/318 (11%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSIL------------- 52
G++P VSY L+ +E GL+ EM V D T S L
Sbjct: 397 GLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKS 456
Query: 53 ---------------------VDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGY 91
+D +G+ G +S A V V + V+ YN +I Y
Sbjct: 457 WSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVN-KRTVIEYNVMIKAY 515
Query: 92 CLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDV 151
+ E+A ++F+ M+ G P TYN+L+ + C L +M G D
Sbjct: 516 GISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDC 575
Query: 152 VTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRA 211
+ + A++ F ++G+ A+E++ M E+ P++ V+++ +AMS A
Sbjct: 576 IPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEA 635
Query: 212 MEKSDIDLDIVVYNVMLD---GMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCW 268
M+++ I + V+YN ++ + D YT N MI
Sbjct: 636 MKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSE 695
Query: 269 EGLLDEAEELLMRMEENG 286
++ +AE + M++ G
Sbjct: 696 RSMVRKAEAIFDSMKQRG 713
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/339 (20%), Positives = 140/339 (41%), Gaps = 15/339 (4%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+GI PT V++N +I G+ E L+ + M+ PD +T++IL+ K +
Sbjct: 327 EGIVPTTVTFNTMIHIYGNNGQLGEVTSLM-KTMKLHCAPDTRTYNILISLHTKNNDIER 385
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A M G++P+ V+Y +L+ + +RH +EEA + M T ++L
Sbjct: 386 AGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTR 445
Query: 125 GWCKVKDVDRA------ICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMK 178
+ + + ++++ + G M +EG ++A + + + G A+ +F +
Sbjct: 446 MYVEAEMLEKSWSWFKRFHVAGNMSSEG-------YSANIDAYGERGYLSEAERVFICCQ 498
Query: 179 EHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXX 238
E + ++ V++ + +A LF +M + D YN ++ +
Sbjct: 499 EVNKRTVIEY-NVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPH 557
Query: 239 XXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFV 298
D + +I G L+ AEE+ M E P+ Y V +
Sbjct: 558 KGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLI 617
Query: 299 HGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLICIYS 337
+ ++ ++ Y++ MK G P ++ LI +Y+
Sbjct: 618 NAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYT 656
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 130/304 (42%), Gaps = 7/304 (2%)
Query: 10 TIVSYNCLIQGLFKFGRWKEGAGLLYE-MMQKGVMPDVQTFSILVDGFGKEGLVSGARCV 68
T++ YN +I+ + + E A L+E MM GV PD T++ LV + RC
Sbjct: 504 TVIEYNVMIKA-YGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCY 562
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
+ M G + + Y ++I + Q+ A +V+ MV P VV Y LI+ +
Sbjct: 563 LEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFAD 622
Query: 129 VKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKE---HGQVPN 185
+V +A+ + M G+ + V + +L+ + +VG A+ ++ + + Q P+
Sbjct: 623 TGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPD 682
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
+ T +++ + +A ++F +M++ + + + +ML
Sbjct: 683 VYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAK 741
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL 305
D ++N ++ +G EA E M +G P+ ++ + +L KL
Sbjct: 742 QMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKS-LGTILMKL 800
Query: 306 DISR 309
+S+
Sbjct: 801 GMSK 804
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 138/315 (43%), Gaps = 8/315 (2%)
Query: 12 VSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGF 71
V++N L+ G + G+ +E L +M ++GV P T S + G V +
Sbjct: 240 VAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAI 299
Query: 72 MVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKD 131
+ G+E + + SL+ YC +E A VFD M + VVT+N +I G+ +
Sbjct: 300 AIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEK----DVVTWNLIISGYVQQGL 355
Query: 132 VDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTV 191
V+ AI + M E LK D VT L+ + KE+ H ++ +
Sbjct: 356 VEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLAST 415
Query: 192 ILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXX 251
++D KC +A +F S ++ D++++N +L
Sbjct: 416 VMDMYAKCGSIVDAKKVF----DSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEG 471
Query: 252 XXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSE 311
+ T+N++I L G +DEA+++ ++M+ +G PN S+ ++G+++ +
Sbjct: 472 VPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAI 531
Query: 312 KYLQIMKCKGFPVDA 326
+L+ M+ G +A
Sbjct: 532 LFLRKMQESGLRPNA 546
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 99/221 (44%), Gaps = 39/221 (17%)
Query: 45 DVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGG-------------- 90
DV T+++++ G+ ++GLV A + M ++ + VT +L+
Sbjct: 339 DVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQ 398
Query: 91 -YCLRHQME--------------------EAMKVFDLMVRRGCLPSVVTYNSLIHGWCKV 129
YC+RH E +A KVFD V + ++ +N+L+ + +
Sbjct: 399 CYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEK----DLILWNTLLAAYAES 454
Query: 130 KDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTC 189
A+ L M EG+ P+V+TW ++ + G+ AK++F M+ G +PNL +
Sbjct: 455 GLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISW 514
Query: 190 TVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDG 230
T +++G+ + EA+ R M++S + + V L
Sbjct: 515 TTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSA 555
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 141/353 (39%), Gaps = 61/353 (17%)
Query: 11 IVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMG 70
+V C G K+ R+ G G+ +++ G+ V S L D +GK G++ A V
Sbjct: 175 VVPNVCKACGALKWSRF--GRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFD 232
Query: 71 FMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN---------- 120
+ + N V +N+L+ GY + EEA+++F M ++G P+ VT +
Sbjct: 233 EIP----DRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMG 288
Query: 121 -------------------------SLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWT 155
SL++ +CKV ++ A + M + DVVTW
Sbjct: 289 GVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRM----FEKDVVTWN 344
Query: 156 ALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAME-- 213
++ G+ Q G L ++ M + ++ L+ V L L +E + L + ++
Sbjct: 345 LIISGYVQQG--LVEDAIY--MCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCY 400
Query: 214 --KSDIDLDIVVYNVMLD--GMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWE 269
+ + DIV+ + ++D C D +N ++
Sbjct: 401 CIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEK------DLILWNTLLAAYAES 454
Query: 270 GLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGF 322
GL EA L M+ G PPN ++N+ + LLR + ++ M+ G
Sbjct: 455 GLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGI 507
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 86/180 (47%), Gaps = 1/180 (0%)
Query: 42 VMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAM 101
V D+ ++ L+ + + GL A + M GV PNV+T+N +I Q++EA
Sbjct: 437 VEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAK 496
Query: 102 KVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGF 161
+F M G +P+++++ ++++G + + AI L +M GL+P+ + T +
Sbjct: 497 DMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSAC 556
Query: 162 CQVGKPLAAKELFFTMKEHGQVPNLQTC-TVILDGLFKCRFHSEAMSLFRAMEKSDIDLD 220
+ + + + + Q +L + T ++D KC ++A +F + S++ L
Sbjct: 557 AHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLS 616
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/241 (19%), Positives = 98/241 (40%), Gaps = 33/241 (13%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G+ P ++++N +I L + G+ E + +M G++P++ +++ +++G + G
Sbjct: 470 EGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEE 529
Query: 65 ARCVMGFMVHVGVEPNVVTYN---------------SLIGGYCLRHQMEEAM-----KVF 104
A + M G+ PN + I GY +R+ ++ +
Sbjct: 530 AILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLV 589
Query: 105 DLMVRRGCL------------PSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVV 152
D+ + G + + N++I + ++ AI L + GLKPD +
Sbjct: 590 DMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNI 649
Query: 153 TWTALVGGFCQVGKPLAAKELFFTM-KEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRA 211
T T ++ G A E+F + + P L+ +++D L +A+ L
Sbjct: 650 TITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEE 709
Query: 212 M 212
M
Sbjct: 710 M 710
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 103/225 (45%), Gaps = 10/225 (4%)
Query: 7 IQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGAR 66
++ ++ +N L+ + G E L Y M +GV P+V T+++++ + G V A+
Sbjct: 437 VEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAK 496
Query: 67 CVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGW 126
+ M G+ PN++++ +++ G EEA+ M G P+ + +
Sbjct: 497 DMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSAC 556
Query: 127 CKVKDVDRAICLLGEMVNEGLKPDVVTW-TALVGGFCQVGKPLAAKELFFTMKEHGQVP- 184
+ + + G ++ +V+ T+LV + + G A+++F + K + ++P
Sbjct: 557 AHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGS-KLYSELPL 615
Query: 185 -NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLD-IVVYNVM 227
N L G K EA++L+R++E + D I + NV+
Sbjct: 616 SNAMISAYALYGNLK-----EAIALYRSLEGVGLKPDNITITNVL 655
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 127/284 (44%), Gaps = 13/284 (4%)
Query: 8 QPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKE-GLVSGAR 66
+P +V +N +I+G K EG L M+++GV PD TF L++G ++ G ++ +
Sbjct: 96 EPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGK 155
Query: 67 CVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGW 126
+ +V G+ N+ N+L+ Y L M+ A VFD R C V ++N +I G+
Sbjct: 156 KLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFD----RRCKEDVFSWNLMISGY 211
Query: 127 CKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNL 186
++K+ + +I LL EM + P VT ++ +V K + + E P+L
Sbjct: 212 NRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSL 271
Query: 187 QTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXX 246
+ +++ C A+ +FR+M+ D++ + ++ G
Sbjct: 272 RLENALVNAYAACGEMDIAVRIFRSMKAR----DVISWTSIVKGYVERGNLKLARTYFDQ 327
Query: 247 XXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPN 290
D ++ IMI G G +E+ E+ M+ G P+
Sbjct: 328 MPVR----DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPD 367
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 120/284 (42%), Gaps = 12/284 (4%)
Query: 11 IVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMG 70
+ S+N +I G + ++E LL EM + V P T +++ K + V
Sbjct: 201 VFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHE 260
Query: 71 FMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVK 130
++ EP++ N+L+ Y +M+ A+++F M R V+++ S++ G+ +
Sbjct: 261 YVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKAR----DVISWTSIVKGYVERG 316
Query: 131 DVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCT 190
++ A +M D ++WT ++ G+ + G + E+F M+ G +P+ T
Sbjct: 317 NLKLARTYFDQMPVR----DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMV 372
Query: 191 VILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXX 250
+L + ++K+ I D+VV N ++D
Sbjct: 373 SVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALID----MYFKCGCSEKAQKVFHD 428
Query: 251 XXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSY 294
D +T+ M+ GL G EA ++ +M++ P+ +Y
Sbjct: 429 MDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITY 472
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 96/199 (48%), Gaps = 7/199 (3%)
Query: 5 KGIQPTIVSY-------NCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFG 57
+G +P +SY N L+ K G W+ G LL +M KG+ P + ++ ++
Sbjct: 410 EGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACS 469
Query: 58 KEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVV 117
K + A + MV G +P V++Y +L+ +EA +V++ M++ G P++
Sbjct: 470 KASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLY 529
Query: 118 TYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTM 177
Y ++ + + LL EM ++G++P VVT+ A++ G + G A E F M
Sbjct: 530 AYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRM 589
Query: 178 KEHGQVPNLQTCTVILDGL 196
K PN T ++++ L
Sbjct: 590 KSENVEPNEITYEMLIEAL 608
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 87/209 (41%), Gaps = 7/209 (3%)
Query: 100 AMKVFDLMVRRGCLPSVVTY-------NSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVV 152
A+++++ ++ G P+ ++Y N L+ K + LL +M ++GLKP
Sbjct: 400 ALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRR 459
Query: 153 TWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAM 212
W A++ + + AA ++F M ++G+ P + + +L L K + + EA ++ M
Sbjct: 460 HWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHM 519
Query: 213 EKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLL 272
K I+ ++ Y M + TFN +I G GL
Sbjct: 520 IKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLS 579
Query: 273 DEAEELLMRMEENGCPPNRCSYNVFVHGL 301
A E RM+ PN +Y + + L
Sbjct: 580 GVAYEWFHRMKSENVEPNEITYEMLIEAL 608
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 76/149 (51%), Gaps = 10/149 (6%)
Query: 37 MMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVE------PNVVTYNSLIGG 90
+ KG +P +Q F ++ GFGK+ + A V+ ++ E PN+ YNSL+G
Sbjct: 138 LKDKGELP-LQVFCAMIKGFGKDKRLKPAVAVVDWLKRKKSESGGVIGPNLFIYNSLLGA 196
Query: 91 YCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPD 150
EA K+ M G +P++VTYN+L+ + + + +A+ +L +G +P+
Sbjct: 197 M---RGFGEAEKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEKGFEPN 253
Query: 151 VVTWTALVGGFCQVGKPLAAKELFFTMKE 179
+T++ + + ++ + A E F ++E
Sbjct: 254 PITYSTALLVYRRMEDGMGALEFFVELRE 282
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 136/323 (42%), Gaps = 19/323 (5%)
Query: 2 KNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGL 61
++++ T VS+ I L + GR E A +M GV P+ TF L+ G G
Sbjct: 27 RHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGD--F 84
Query: 62 VSGARCV----MGFMVHVGVEPN-VVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSV 116
SG+ + G+ +G++ N V+ ++IG Y R + ++A VFD M +
Sbjct: 85 TSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNS---- 140
Query: 117 VTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFT 176
VT+N++I G+ + VD A +M ++ + D+++WTA++ GF + G A F
Sbjct: 141 VTWNTMIDGYMRSGQVDNA----AKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFRE 196
Query: 177 MKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXX 236
M+ G P+ L+ S + + R + D ++ V N ++D C
Sbjct: 197 MQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGC 256
Query: 237 XXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNV 296
++N +I G G E+ +M+E G P+ ++
Sbjct: 257 VEFARQVFYNMEKRT----VVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTG 312
Query: 297 FVHGLLRKLDISRSEKYLQIMKC 319
+ + +Y QIMKC
Sbjct: 313 ALTACSHVGLVEEGLRYFQIMKC 335
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 5/203 (2%)
Query: 11 IVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMG 70
++S+ +I G K G +E EM GV PD ++ G +S V
Sbjct: 171 LISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHR 230
Query: 71 FMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVK 130
+++ + NV NSLI YC +E A +VF M +R +VV++NS+I G+
Sbjct: 231 YVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKR----TVVSWNSVIVGFAANG 286
Query: 131 DVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMK-EHGQVPNLQTC 189
+ ++ +M +G KPD VT+T + VG F MK ++ P ++
Sbjct: 287 NAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHY 346
Query: 190 TVILDGLFKCRFHSEAMSLFRAM 212
++D + +A+ L ++M
Sbjct: 347 GCLVDLYSRAGRLEDALKLVQSM 369
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 108/218 (49%), Gaps = 24/218 (11%)
Query: 8 QPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARC 67
+ IV+ N ++ G K R E L EM + +V ++++++ +G A
Sbjct: 105 ERNIVTCNAMLTGYVKCRRMNEAWTLFREMPK-----NVVSWTVMLTALCDDGRSEDAVE 159
Query: 68 VMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWC 127
+ M E NVV++N+L+ G ME+A +VFD M R VV++N++I G+
Sbjct: 160 LFDEMP----ERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSR----DVVSWNAMIKGYI 211
Query: 128 KVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQ 187
+ ++ A L G+M + +VVTWT++V G+C+ G A LF M E N+
Sbjct: 212 ENDGMEEAKLLFGDMSEK----NVVTWTSMVYGYCRYGDVREAYRLFCEMPER----NIV 263
Query: 188 TCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYN 225
+ T ++ G + EA+ LF M+K D+D V N
Sbjct: 264 SWTAMISGFAWNELYREALMLFLEMKK---DVDAVSPN 298
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 106/224 (47%), Gaps = 11/224 (4%)
Query: 12 VSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGF 71
V++ +I GL + + E A LL +M++ G+ P T+S+L+ G + + +
Sbjct: 432 VTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCV 491
Query: 72 MVHVGV--EPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKV 129
+ +P+++ NSL+ Y +E+A ++F MV++ V++NS+I G
Sbjct: 492 IAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQK----DTVSWNSMIMGLSHH 547
Query: 130 KDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV-PNLQT 188
D+A+ L EM++ G KP+ VT+ ++ G ELF MKE + P +
Sbjct: 548 GLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDH 607
Query: 189 CTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMC 232
++D L + EA A+ + D VY +L G+C
Sbjct: 608 YISMIDLLGRAGKLKEAEEFISALPFTP---DHTVYGALL-GLC 647
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 75/183 (40%), Gaps = 48/183 (26%)
Query: 138 LLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLF 197
LL ++ G VV WT+L+ + + G A+ LF M E N+ TC +L G
Sbjct: 64 LLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPER----NIVTCNAMLTGYV 119
Query: 198 KCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTY 257
KCR +EA +LFR M K ++V + VML +C
Sbjct: 120 KCRRMNEAWTLFREMPK-----NVVSWTVMLTALCD------------------------ 150
Query: 258 TFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIM 317
+G ++A EL M E N S+N V GL+R D+ ++++ M
Sbjct: 151 -----------DGRSEDAVELFDEMPER----NVVSWNTLVTGLIRNGDMEKAKQVFDAM 195
Query: 318 KCK 320
+
Sbjct: 196 PSR 198
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 76/158 (48%), Gaps = 1/158 (0%)
Query: 60 GLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTY 119
G A + M + G EP+ +TY+ L+ G C ++EEA V D M +GC P + T+
Sbjct: 384 GRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTW 443
Query: 120 NSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKE 179
LI G CK ++D+A+ M+ +G D L+ GF K A M +
Sbjct: 444 TILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVK 503
Query: 180 HGQV-PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSD 216
+ V P T +++D L K + EA+ L + M+K +
Sbjct: 504 NANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQN 541
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 74/147 (50%), Gaps = 2/147 (1%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
M+N+ G +P ++Y+ L+ GL K R +E G+L +M +G PD++T++IL+ G K
Sbjct: 396 MRNA-GYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNN 454
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCL-PSVVTY 119
+ A M+ G + + + LI G+ + ++ E A MV+ + P TY
Sbjct: 455 ELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTY 514
Query: 120 NSLIHGWCKVKDVDRAICLLGEMVNEG 146
LI K+K + A+ LL M +
Sbjct: 515 KLLIDKLLKIKKSEEALDLLQMMKKQN 541
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 140/346 (40%), Gaps = 18/346 (5%)
Query: 8 QPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARC 67
Q + V+YN ++ L + E ++ EM G D+ T+ + F K +++
Sbjct: 260 QHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVK 319
Query: 68 VMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVR-------RGCLPSVVTYN 120
+ +M+ +P++ + L LR+ DL+ R G S Y+
Sbjct: 320 LYEYMMDGPFKPSIQDCSLL-----LRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYD 374
Query: 121 SLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEH 180
+ V D A + M N G +PD +T++ LV G C+ + A+ + M+
Sbjct: 375 GIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQ 434
Query: 181 GQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXX 240
G P+++T T+++ G K +A++ F M + D+D + +V++DG
Sbjct: 435 GCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGA 494
Query: 241 XXXXXXXXXXXXXFD-TYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVH 299
T+ ++I L +EA +LL M++ P +Y
Sbjct: 495 SIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYP----AYAEAFD 550
Query: 300 GLLRKL-DISRSEKYLQIMKCKGFPVDANTTELLICIYSANKGDNA 344
G L K + ++K+L ++ K P A ++ Y + +A
Sbjct: 551 GYLAKFGTLEDAKKFLDVLSSKDSPSFAAYFHVIEAFYREGRLTDA 596
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 109/230 (47%), Gaps = 12/230 (5%)
Query: 5 KGIQ-PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKG---VMPDVQTFSILVDGFGKEG 60
KGI+ P I S+N I+G + KE L +M++ G PD T+ +L
Sbjct: 111 KGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLR 170
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
L S ++G ++ + +E +N+ I + ME A KVFD + +V++N
Sbjct: 171 LSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFD----ESPVRDLVSWN 226
Query: 121 SLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEH 180
LI+G+ K+ + ++AI + M +EG+KPD VT LV +G KE + +KE+
Sbjct: 227 CLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKEN 286
Query: 181 GQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDG 230
G + ++D KC EA +F +EK IV + M+ G
Sbjct: 287 GLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKR----TIVSWTTMISG 332
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 94/224 (41%), Gaps = 8/224 (3%)
Query: 8 QPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARC 67
+ +V +N +I G + R ++ L EM PD T + + G +
Sbjct: 351 EKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIW 410
Query: 68 VMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWC 127
+ ++ + NV SL+ Y + EA+ VF + R L TY ++I G
Sbjct: 411 IHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSL----TYTAIIGGLA 466
Query: 128 KVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV-PNL 186
D AI EM++ G+ PD +T+ L+ C G ++ F MK + P L
Sbjct: 467 LHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQL 526
Query: 187 QTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDG 230
+ ++++D L + EA R ME ++ D V+ +L G
Sbjct: 527 KHYSIMVDLLGRAGLLEEA---DRLMESMPMEADAAVWGALLFG 567
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 83/179 (46%), Gaps = 8/179 (4%)
Query: 45 DVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVF 104
D+ +++ L++G+ K G A V M GV+P+ VT L+ + + + +
Sbjct: 221 DLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFY 280
Query: 105 DLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQV 164
+ + G ++ N+L+ + K D+ A + + K +V+WT ++ G+ +
Sbjct: 281 EYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLE----KRTIVSWTTMISGYARC 336
Query: 165 GKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVV 223
G +++LF M+E V ++ G + + +A++LF+ M+ S+ D +
Sbjct: 337 GLLDVSRKLFDDMEEKDVV----LWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEIT 391
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 89/187 (47%), Gaps = 1/187 (0%)
Query: 14 YNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMV 73
+N L++ KE A ++E + PDV+T +IL+ GF + G V+ MV
Sbjct: 179 FNILLRAFCTEREMKE-ARSIFEKLHSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMV 237
Query: 74 HVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVD 133
G +PN VTY I G+C + EA+++F+ M R +V +LIHG ++
Sbjct: 238 KRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKI 297
Query: 134 RAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVIL 193
+A L E+ GL PD + AL+ + G A ++ M+E G P+ T +
Sbjct: 298 KARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMF 357
Query: 194 DGLFKCR 200
G+ K +
Sbjct: 358 IGMMKSK 364
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 104/228 (45%), Gaps = 6/228 (2%)
Query: 9 PTIVSY---NCLIQGLFKFGRWKEGAGLLYEMMQKGVMPD--VQTFSILVDGFGKEGLVS 63
P ++S+ + L+ + KFG ++E +M ++ V F+IL+ F E +
Sbjct: 134 PNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDEFNILLRAFCTEREMK 193
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
AR + +H P+V T N L+ G+ + + MV+RG P+ VTY I
Sbjct: 194 EARSIFE-KLHSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRI 252
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
G+CK ++ A+ L +M V T L+ G + A++LF + + G
Sbjct: 253 DGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLT 312
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGM 231
P+ ++ L KC S A+ + + ME+ I+ D V ++ M GM
Sbjct: 313 PDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGM 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 2/203 (0%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G +P V+Y I G K + E L +M + VQ + L+ G G
Sbjct: 239 RGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIK 298
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
AR + + G+ P+ YN+L+ + A+KV M +G P VT++S+
Sbjct: 299 ARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFI 358
Query: 125 GWCKVKDVD-RAIC-LLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
G K K+ +C +M L P T L+ FC G+ +L+ M E G
Sbjct: 359 GMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGY 418
Query: 183 VPNLQTCTVILDGLFKCRFHSEA 205
P+ ++ L R ++A
Sbjct: 419 CPHGHALELLTTALCARRRANDA 441
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 106/222 (47%), Gaps = 12/222 (5%)
Query: 12 VSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGF 71
VS+N +I G + GR+K+ + EM +K V PD T L++ G R + +
Sbjct: 224 VSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEY 283
Query: 72 MVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLP--SVVTYNSLIHGWCKV 129
+V E N + +LI YC +EE + VF+ C P + +NS+I G
Sbjct: 284 IVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFE------CAPKKQLSCWNSMILGLANN 337
Query: 130 KDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV-PNLQT 188
+RA+ L E+ GL+PD V++ ++ G+ A E F MKE + P+++
Sbjct: 338 GFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKH 397
Query: 189 CTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDG 230
T++++ L EA +L + M ++ D V+++ +L
Sbjct: 398 YTLMVNVLGGAGLLEEAEALIKNMP---VEEDTVIWSSLLSA 436
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 131/309 (42%), Gaps = 14/309 (4%)
Query: 14 YNCLIQGLFKFGRWKEGAGLLYEMM--QKGVMPDVQTFSILVDGFGKEGLVSGARCVMGF 71
+N +I+G + + + +M+ V P T+ + +G+ G R + G
Sbjct: 92 WNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGM 151
Query: 72 MVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKD 131
++ G+E + N+++ Y + EA ++F M+ VV +NS+I G+ K
Sbjct: 152 VIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGF----DVVAWNSMIMGFAKCGL 207
Query: 132 VDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTV 191
+D+A L EM + V+W +++ GF + G+ A ++F M+E P+ T
Sbjct: 208 IDQAQNLFDEMPQR----NGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVS 263
Query: 192 ILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXX 251
+L+ + + + ++ +L+ +V ++D C
Sbjct: 264 LLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQ 323
Query: 252 XXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSE 311
+N MI GL G + A +L +E +G P+ S+ + ++ R++
Sbjct: 324 LS----CWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRAD 379
Query: 312 KYLQIMKCK 320
++ ++MK K
Sbjct: 380 EFFRLMKEK 388
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 83/375 (22%), Positives = 147/375 (39%), Gaps = 37/375 (9%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQK-GVMPDVQTFSILVDGFGKEGL 61
+S+G P+ + LI+ + R +YE M+K G P V ++ ++D K G
Sbjct: 185 DSQGRPPSEKQFEILIR-MHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGY 243
Query: 62 VSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNS 121
A V G+ T+ L+ G C ++EE +++ M C P V Y +
Sbjct: 244 FDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTA 303
Query: 122 LIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHG 181
+I ++D ++ + EM + +KPDV+ + LV G C+ G+ ELF MK
Sbjct: 304 MIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQ 363
Query: 182 QVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXX 241
+ + + V+++G A +L+ + S DI +YN ++ G+C
Sbjct: 364 ILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAY 423
Query: 242 XXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNR---------C 292
D T + ++ L + +L R+ E G P + C
Sbjct: 424 KLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLC 483
Query: 293 S-------------------------YNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDAN 327
+ YN+ + L + DI +S M+ GF D++
Sbjct: 484 ADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSS 543
Query: 328 TTELLICIYSANKGD 342
+ + IC + KGD
Sbjct: 544 SYSIAICCF-VEKGD 557
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 108/286 (37%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KG + +YN L + G ++ L M +G P + F IL+
Sbjct: 152 KGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLR 211
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
V M G +P V YN ++ + A+ V++ G + T+ L+
Sbjct: 212 VYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVK 271
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
G CK ++ + +L M KPDV +TA++ G A+ ++ M+ P
Sbjct: 272 GLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKP 331
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXX 244
++ ++ GL K LF M+ I +D +Y V+++G
Sbjct: 332 DVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLW 391
Query: 245 XXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPN 290
D +N +I+GLC +D+A +L E P+
Sbjct: 392 EDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPD 437
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 10 TIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVM 69
++ YN L++ L+K G ++ L YEM + G PD ++SI + F ++G V A
Sbjct: 506 SVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFH 565
Query: 70 GFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCL------PSVVTYNSLI 123
++ + P++ Y SL G C +++ M L+VR CL P Y +
Sbjct: 566 EKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVM----LLVRE-CLGNVESGPMEFKYALTV 620
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEH 180
CK + ++ + ++ EM EG+ + V + A++ G + G A+E+F +K+
Sbjct: 621 CHVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTELKKR 677
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/312 (18%), Positives = 114/312 (36%), Gaps = 36/312 (11%)
Query: 39 QKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQME 98
QKG D ++ + G A + M G P+ + LI + +
Sbjct: 151 QKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGL 210
Query: 99 EAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALV 158
V++ M + G P V YN ++ K D A+ + + +GL + T+ LV
Sbjct: 211 RVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILV 270
Query: 159 GGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDID 218
G C+ G+ E+ M+E+ P++ T ++ L ++ ++ M + +I
Sbjct: 271 KGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIK 330
Query: 219 LDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEEL 278
D++ Y + + GLC +G ++ EL
Sbjct: 331 PDVMAYGTL-----------------------------------VVGLCKDGRVERGYEL 355
Query: 279 LMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLI-CIYS 337
M M+ +R Y V + G + + + + + G+ D +I + S
Sbjct: 356 FMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCS 415
Query: 338 ANKGDNAFQELQ 349
N+ D A++ Q
Sbjct: 416 VNQVDKAYKLFQ 427
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 82/186 (44%), Gaps = 3/186 (1%)
Query: 46 VQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFD 105
V ++IL++ K G + + + M +G EP+ +Y+ I + + ++ A +
Sbjct: 507 VSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHE 566
Query: 106 LMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGE-MVNEGLKPDVVTWTALVGGFCQV 164
++ C+PS+ Y SL G C++ ++D + L+ E + N P + V C+
Sbjct: 567 KIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPMEFKYALTVCHVCKG 626
Query: 165 GKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDI--DLDIV 222
++ M + G N I+ G+ K A +F ++K + + D+V
Sbjct: 627 SNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTELKKRKVMTEADMV 686
Query: 223 VYNVML 228
VY ML
Sbjct: 687 VYEEML 692
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 94/220 (42%), Gaps = 3/220 (1%)
Query: 84 YNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMV 143
Y++LI Y AM+ F+ M + G S V++N+L++ K+ D+ L E+
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP 164
Query: 144 NEGLK--PDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRF 201
K PD +++ L+ +C G P A E+ M+ G T IL L+K
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGE 224
Query: 202 HSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNI 261
A +L+ M K +LD YNV + DT ++N
Sbjct: 225 LEVADNLWNEMVKKGCELDNAAYNVRIMS-AQKESPERVKELIEEMSSMGLKPDTISYNY 283
Query: 262 MIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGL 301
++ C G+LDEA+++ +E N C PN ++ + L
Sbjct: 284 LMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHL 323
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 87/175 (49%), Gaps = 1/175 (0%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KG++ T +++ ++ L+K G + L EM++KG D +++ + KE
Sbjct: 203 KGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQKES-PER 261
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
+ ++ M +G++P+ ++YN L+ YC R ++EA KV++ + C P+ T+ +LI
Sbjct: 262 VKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIF 321
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKE 179
C + ++ + + V PD T LV G + K AK L T+K+
Sbjct: 322 HLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDAKGLIRTVKK 376
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 99/207 (47%), Gaps = 3/207 (1%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQK--GVMPDVQTFSILVDGFGKEGLVS 63
G + VS+N L+ + + L E+ Q+ ++PD ++ IL+ + G
Sbjct: 132 GTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPE 191
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A +M M G+E + + +++ + ++E A +++ MV++GC YN I
Sbjct: 192 KAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRI 251
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
K + +R L+ EM + GLKPD +++ L+ +C+ G AK+++ ++ +
Sbjct: 252 MSAQK-ESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCA 310
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFR 210
PN T ++ L R + + ++F+
Sbjct: 311 PNAATFRTLIFHLCYSRLYEQGYAIFK 337
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 79/162 (48%), Gaps = 3/162 (1%)
Query: 33 LLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYC 92
+ +M + G++P+ ++DG K+GLV A + G M G P VV Y +++ +C
Sbjct: 121 IFKKMKEGGLIPNA---VAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFC 177
Query: 93 LRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVV 152
H++E+A ++F M G P+ +Y L+ G +D A+ EM+ G P+V
Sbjct: 178 KAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVP 237
Query: 153 TWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILD 194
T+ LV C+V A+ T+ + G N++ +D
Sbjct: 238 TFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMD 279
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 73/135 (54%), Gaps = 3/135 (2%)
Query: 98 EEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTAL 157
E++ ++F M G +P+ V +++ G CK V A+ L G M ++G P+VV +TA+
Sbjct: 116 EDSDEIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAV 172
Query: 158 VGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDI 217
V FC+ K AK +F M+ +G PN + V++ GL+ C +A++ M +S
Sbjct: 173 VEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGH 232
Query: 218 DLDIVVYNVMLDGMC 232
++ + ++D +C
Sbjct: 233 SPNVPTFVELVDALC 247
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 71/142 (50%), Gaps = 3/142 (2%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+ P V+ ++ GL K G +E L M KG +P+V ++ +V+ F K + A
Sbjct: 129 GLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDA 185
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ + M + G+ PN +Y L+ G + +++A+ M+ G P+V T+ L+
Sbjct: 186 KRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDA 245
Query: 126 WCKVKDVDRAICLLGEMVNEGL 147
C+VK V++A + + +G
Sbjct: 246 LCRVKGVEQAQSAIDTLNQKGF 267
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 70/159 (44%), Gaps = 3/159 (1%)
Query: 167 PLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNV 226
P + E+F MKE G +PN +LDGL K EAM LF M ++V+Y
Sbjct: 115 PEDSDEIFKKMKEGGLIPN---AVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTA 171
Query: 227 MLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENG 286
+++ C + +++ ++++GL +LD+A M E+G
Sbjct: 172 VVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESG 231
Query: 287 CPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVD 325
PN ++ V L R + +++ + + KGF V+
Sbjct: 232 HSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVN 270
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 49/107 (45%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KG P +V Y +++ K + ++ + +M G+ P+ ++ +LV G ++
Sbjct: 160 KGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDD 219
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRG 111
A M+ G PNV T+ L+ C +E+A D + ++G
Sbjct: 220 AVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKG 266
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 79/162 (48%), Gaps = 3/162 (1%)
Query: 33 LLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYC 92
+ +M + G++P+ ++DG K+GLV A + G M G P VV Y +++ +C
Sbjct: 121 IFKKMKEGGLIPNA---VAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFC 177
Query: 93 LRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVV 152
H++E+A ++F M G P+ +Y L+ G +D A+ EM+ G P+V
Sbjct: 178 KAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVP 237
Query: 153 TWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILD 194
T+ LV C+V A+ T+ + G N++ +D
Sbjct: 238 TFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMD 279
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 73/135 (54%), Gaps = 3/135 (2%)
Query: 98 EEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTAL 157
E++ ++F M G +P+ V +++ G CK V A+ L G M ++G P+VV +TA+
Sbjct: 116 EDSDEIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAV 172
Query: 158 VGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDI 217
V FC+ K AK +F M+ +G PN + V++ GL+ C +A++ M +S
Sbjct: 173 VEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGH 232
Query: 218 DLDIVVYNVMLDGMC 232
++ + ++D +C
Sbjct: 233 SPNVPTFVELVDALC 247
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 71/142 (50%), Gaps = 3/142 (2%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+ P V+ ++ GL K G +E L M KG +P+V ++ +V+ F K + A
Sbjct: 129 GLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDA 185
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ + M + G+ PN +Y L+ G + +++A+ M+ G P+V T+ L+
Sbjct: 186 KRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDA 245
Query: 126 WCKVKDVDRAICLLGEMVNEGL 147
C+VK V++A + + +G
Sbjct: 246 LCRVKGVEQAQSAIDTLNQKGF 267
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 70/159 (44%), Gaps = 3/159 (1%)
Query: 167 PLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNV 226
P + E+F MKE G +PN +LDGL K EAM LF M ++V+Y
Sbjct: 115 PEDSDEIFKKMKEGGLIPN---AVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTA 171
Query: 227 MLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENG 286
+++ C + +++ ++++GL +LD+A M E+G
Sbjct: 172 VVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESG 231
Query: 287 CPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVD 325
PN ++ V L R + +++ + + KGF V+
Sbjct: 232 HSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVN 270
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 49/107 (45%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KG P +V Y +++ K + ++ + +M G+ P+ ++ +LV G ++
Sbjct: 160 KGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDD 219
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRG 111
A M+ G PNV T+ L+ C +E+A D + ++G
Sbjct: 220 AVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKG 266
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 91/183 (49%), Gaps = 2/183 (1%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+ P +V+Y LI L+K R G GL M+ KG P++ TF++ + A
Sbjct: 207 GLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDA 266
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ M + VEP+ +TYN +I G+ L + A +V+ M +G P++ Y ++IH
Sbjct: 267 NDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHY 326
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
CK + D A + + + + P++ T L+ G + G+ AK + + H +VP
Sbjct: 327 LCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIMELV--HRRVPP 384
Query: 186 LQT 188
++
Sbjct: 385 FRS 387
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 90/202 (44%), Gaps = 18/202 (8%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
GI VS+N I+ + G + EM + G+ PDV T++ L+ K
Sbjct: 172 GIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKH-----E 226
Query: 66 RCVMG-----FMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
RCV+G MV G +PN+ T+N I R + +A + LM + P +TYN
Sbjct: 227 RCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYN 286
Query: 121 SLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTM--- 177
+I G+ + D A + M +G KP++ + ++ C+ G +L +TM
Sbjct: 287 MVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGN----FDLAYTMCKD 342
Query: 178 -KEHGQVPNLQTCTVILDGLFK 198
PNL T ++L GL K
Sbjct: 343 CMRKKWYPNLDTVEMLLKGLVK 364
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 108/269 (40%), Gaps = 1/269 (0%)
Query: 56 FGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMK-VFDLMVRRGCLP 114
+GK G+ A M G + +V ++N+ + + + + D + G
Sbjct: 116 YGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDI 175
Query: 115 SVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELF 174
V++N I +C++ +D A + EM GL PDVVT+T L+ + + + L+
Sbjct: 176 DAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLW 235
Query: 175 FTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXX 234
M G PNL T V + L R +A L M K ++ D + YN+++ G
Sbjct: 236 NLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLA 295
Query: 235 XXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSY 294
+ + MI LC G D A + PN +
Sbjct: 296 RFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTV 355
Query: 295 NVFVHGLLRKLDISRSEKYLQIMKCKGFP 323
+ + GL++K + +++ ++++ + P
Sbjct: 356 EMLLKGLVKKGQLDQAKSIMELVHRRVPP 384
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 1/145 (0%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KG +P + ++N IQ L R + LL M + V PD T+++++ GF
Sbjct: 241 KGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDM 300
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A V M G +PN+ Y ++I C + A + +R+ P++ T L+
Sbjct: 301 AERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLK 360
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKP 149
G K +D+A ++ E+V+ + P
Sbjct: 361 GLVKKGQLDQAKSIM-ELVHRRVPP 384
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 109/220 (49%), Gaps = 23/220 (10%)
Query: 11 IVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMG 70
+V++ +I G K G +E L + + +V T++ +V G+ + +S A +
Sbjct: 77 VVTWTHVITGYIKLGDMREARELFDRVDSR---KNVVTWTAMVSGYLRSKQLSIAEMLFQ 133
Query: 71 FMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVK 130
M E NVV++N++I GY ++++A+++FD M R ++V++NS++ +
Sbjct: 134 EMP----ERNVVSWNTMIDGYAQSGRIDKALELFDEMPER----NIVSWNSMVKALVQRG 185
Query: 131 DVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCT 190
+D A+ L M + DVV+WTA+V G + GK A+ LF M E N+ +
Sbjct: 186 RIDEAMNLFERMP----RRDVVSWTAMVDGLAKNGKVDEARRLFDCMPER----NIISWN 237
Query: 191 VILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDG 230
++ G + EA LF+ M + D +N M+ G
Sbjct: 238 AMITGYAQNNRIDEADQLFQVMP----ERDFASWNTMITG 273
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 121/279 (43%), Gaps = 27/279 (9%)
Query: 32 GLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGY 91
L+ + P V L+ K G ++ AR + + E +VVT+ +I GY
Sbjct: 32 NLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLP----ERDVVTWTHVITGY 87
Query: 92 CLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDV 151
M EA ++FD + R +VVT+ +++ G+ + K + A L EM +V
Sbjct: 88 IKLGDMREARELFDRVDSR---KNVVTWTAMVSGYLRSKQLSIAEMLFQEMPER----NV 140
Query: 152 VTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRA 211
V+W ++ G+ Q G+ A ELF M E N+ + ++ L + EAM+LF
Sbjct: 141 VSWNTMIDGYAQSGRIDKALELFDEMPER----NIVSWNSMVKALVQRGRIDEAMNLFER 196
Query: 212 MEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGL 271
M + D+V + M+DG+ + ++N MI G
Sbjct: 197 MPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPER----NIISWNAMITGYAQNNR 248
Query: 272 LDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRS 310
+DEA++L M E S+N + G +R +++++
Sbjct: 249 IDEADQLFQVMPERDF----ASWNTMITGFIRNREMNKA 283
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 106/246 (43%), Gaps = 27/246 (10%)
Query: 79 PNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICL 138
P V LIG C ++ EA K+FD + R VVT+ +I G+ K+ D+ A L
Sbjct: 44 PRVPQPEWLIGELCKVGKIAEARKLFDGLPER----DVVTWTHVITGYIKLGDMREAREL 99
Query: 139 LGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFK 198
+ + + +VVTWTA+V G+ + + A+ LF M E N+ + ++DG +
Sbjct: 100 FDRVDS---RKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPER----NVVSWNTMIDGYAQ 152
Query: 199 CRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYT 258
+A+ LF M + +IV +N M+ + D +
Sbjct: 153 SGRIDKALELFDEMP----ERNIVSWNSMVKALVQRGRIDEAMNLFERMPRR----DVVS 204
Query: 259 FNIMIRGLCWEGLLDEAEELLMRMEENGCPPNR--CSYNVFVHGLLRKLDISRSEKYLQI 316
+ M+ GL G +DEA L C P R S+N + G + I +++ Q+
Sbjct: 205 WTAMVDGLAKNGKVDEARRLF------DCMPERNIISWNAMITGYAQNNRIDEADQLFQV 258
Query: 317 MKCKGF 322
M + F
Sbjct: 259 MPERDF 264
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 98/226 (43%), Gaps = 45/226 (19%)
Query: 8 QPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARC 67
+ I+S+N +I G + R E L M ++ D +++ ++ GF + ++ A
Sbjct: 230 ERNIISWNAMITGYAQNNRIDEADQLFQVMPER----DFASWNTMITGFIRNREMNKACG 285
Query: 68 VMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCL-PSVVTYNS----- 121
+ M E NV+++ ++I GY + EEA+ VF M+R G + P+V TY S
Sbjct: 286 LFDRMP----EKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSAC 341
Query: 122 -----LIHGWCKVKDVDRAICLLGEMVNEGL-----------------------KPDVVT 153
L+ G + + +++ E+V L + D+++
Sbjct: 342 SDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLIS 401
Query: 154 WTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKC 199
W +++ + G A E++ M++HG P + L+ LF C
Sbjct: 402 WNSMIAVYAHHGHGKEAIEMYNQMRKHGFKP---SAVTYLNLLFAC 444
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 132/346 (38%), Gaps = 31/346 (8%)
Query: 8 QPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKG-VMPDVQTF-SILVDGFGKEGLVSGA 65
+ ++S+ +I G + +E + +M++ G V P+V T+ SIL GLV G
Sbjct: 292 EKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQ 351
Query: 66 RC--VMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
+ ++ VH + N + ++L+ Y ++ A K+FD + C ++++NS+I
Sbjct: 352 QIHQLISKSVH---QKNEIVTSALLNMYSKSGELIAARKMFDNGL--VCQRDLISWNSMI 406
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
+ AI + +M G KP VT+ L+ G E F + +
Sbjct: 407 AVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESL 466
Query: 184 PNLQ---TCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXX 240
P + TC V L C + + D L Y +L C
Sbjct: 467 PLREEHYTCLVDL-----CGRAGRLKDVTNFINCDDARLSRSFYGAILSA-CNVHNEVSI 520
Query: 241 XXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNR-CSY----- 294
D T+ +M G +EA E+ M+M+E G CS+
Sbjct: 521 AKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGK 580
Query: 295 --NVFV-----HGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLI 333
++FV H LD S+ ++ K K DA E L+
Sbjct: 581 QNHLFVVGDKSHPQFEALDSILSDLRNKMRKNKNVTSDAEEAEFLV 626
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 4/209 (1%)
Query: 8 QPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARC 67
+P IV +N + +G +F E L E+++ G++PD TF L+ + R
Sbjct: 91 EPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQ 150
Query: 68 VMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWC 127
+ + +G++ NV +LI Y ++ A VFD +V P VV YN++I G+
Sbjct: 151 LHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVE----PCVVCYNAMITGYA 206
Query: 128 KVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQ 187
+ + A+ L EM + LKP+ +T +++ +G K + K+H ++
Sbjct: 207 RRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVK 266
Query: 188 TCTVILDGLFKCRFHSEAMSLFRAMEKSD 216
T ++D KC +A+S+F M D
Sbjct: 267 VNTALIDMFAKCGSLDDAVSIFEKMRYKD 295
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 121/285 (42%), Gaps = 17/285 (5%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G +P + N LI KF + L +M Q+ V+ +++ ++ + K + A
Sbjct: 91 GHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVI----SWTTMISAYSKCKIHQKA 146
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ M+ V PNV TY+S++ C + M + + +++ G V ++LI
Sbjct: 147 LELLVLMLRDNVRPNVYTYSSVLRS-C--NGMSDVRMLHCGIIKEGLESDVFVRSALIDV 203
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+ K+ + + A+ + EMV D + W +++GGF Q + A ELF MK G +
Sbjct: 204 FAKLGEPEDALSVFDEMVT----GDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAE 259
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
T T +L M + K D DL ++ N ++D C
Sbjct: 260 QATLTSVLRACTGLALLELGMQAHVHIVKYDQDL--ILNNALVDMYCKCGSLEDALRVFN 317
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPN 290
D T++ MI GL G EA +L RM+ +G PN
Sbjct: 318 QMKER----DVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPN 358
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 87/211 (41%), Gaps = 41/211 (19%)
Query: 37 MMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQ 96
++++G+ DV S L+D F K G A V MV + + +NS+IGG+ +
Sbjct: 185 IIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMV----TGDAIVWNSIIGGFAQNSR 240
Query: 97 MEEAMKVFDLMVRRGCLPS--------------------------VVTY-------NSLI 123
+ A+++F M R G + +V Y N+L+
Sbjct: 241 SDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALV 300
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
+CK ++ A+ + +M DV+TW+ ++ G Q G A +LF MK G
Sbjct: 301 DMYCKCGSLEDALRVFNQMKER----DVITWSTMISGLAQNGYSQEALKLFERMKSSGTK 356
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEK 214
PN T +L + FR+M+K
Sbjct: 357 PNYITIVGVLFACSHAGLLEDGWYYFRSMKK 387
>AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein / CBS domain-containing protein |
chr5:3374443-3377332 REVERSE LENGTH=580
Length = 580
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 107/226 (47%), Gaps = 19/226 (8%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGV---MPDVQTFSI--LVDG 55
M GI +SY +++GL K R E +L E ++ G P + + I L+D
Sbjct: 103 MAEPGGIGVDSISYATILKGLGKARRIDEAFQML-ETIEYGTAAGTPKLSSSLIYGLLDA 161
Query: 56 FGKEGLVSGARCVMG----FMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRG 111
G + A ++ ++ G P+V+ YN L+ GY + A+ + D M+R
Sbjct: 162 LINAGDLRRANGLLARYDILLLDHGT-PSVLIYNLLMKGYVNSESPQAAINLLDEMLRLR 220
Query: 112 CLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEG-------LKPDVVTWTALVGGFCQV 164
P +TYN+LIH K D+D A+ +M + L+PDVVT+T LV GF
Sbjct: 221 LEPDRLTYNTLIHACIKCGDLDAAMKFFNDMKEKAEEYYDDFLQPDVVTYTTLVKGFGDA 280
Query: 165 GKPLAAKELFFTMKEHGQVPNLQTC-TVILDGLFKCRFHSEAMSLF 209
L+ +E+F MK V +T T ++D + KC S A+ +F
Sbjct: 281 TDLLSLQEIFLEMKLCENVFIDRTAFTAVVDAMLKCGSTSGALCVF 326
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 121/287 (42%), Gaps = 9/287 (3%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCV 68
P + +N +I G G W +G L M +G P+ T L G L+ A V
Sbjct: 170 PDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSV 229
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
F + + ++ + +L+ Y + A VF+ + P +V +SLI G+ +
Sbjct: 230 HAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISE----PDLVACSSLITGYSR 285
Query: 129 VKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQT 188
+ A+ L E+ G KPD V ++G ++ ++ KE+ + G +++
Sbjct: 286 CGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKV 345
Query: 189 CTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXX 248
C+ ++D KC AMSLF + + +IV +N ++ G+
Sbjct: 346 CSALIDMYSKCGLLKCAMSLFAGIPEK----NIVSFNSLILGLGLHGFASTAFEKFTEIL 401
Query: 249 XXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRME-ENGCPPNRCSY 294
D TF+ ++ C GLL++ +E+ RM+ E G P Y
Sbjct: 402 EMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHY 448
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 79/378 (20%), Positives = 142/378 (37%), Gaps = 43/378 (11%)
Query: 8 QPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARC 67
+ ++ +N +I+ K ++ L ++++ PD T++ L GF + G RC
Sbjct: 68 ERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRC 127
Query: 68 VMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWC 127
+ G + G+ + + ++++ Y + EA K+F + P + +N +I G+
Sbjct: 128 IHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPD----PDLALWNVMILGYG 183
Query: 128 KVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQ-----VGKPLAAKELFFTMKEHGQ 182
D+ I L M + G +P+ T AL G V + A L + H
Sbjct: 184 CCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSY 243
Query: 183 V--------------------------PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSD 216
V P+L C+ ++ G +C H EA+ LF + S
Sbjct: 244 VGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSG 303
Query: 217 IDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAE 276
D V+ ++L D + +I GLL A
Sbjct: 304 KKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAM 363
Query: 277 ELLMRMEENGCPPNRCSYNVFVHGL-LRKLDISRSEKYLQIMKCKGFPVDANTTELL-IC 334
L + E N S+N + GL L + EK+ +I++ P + + LL C
Sbjct: 364 SLFAGIPEK----NIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTC 419
Query: 335 IYSA--NKGDNAFQELQQ 350
+S NKG F+ ++
Sbjct: 420 CHSGLLNKGQEIFERMKS 437
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 131/329 (39%), Gaps = 56/329 (17%)
Query: 11 IVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMG 70
+VS+N +I G + G+ E L E + DV T++ +V G+ + +V AR +
Sbjct: 250 VVSWNTIITGYAQSGKIDEARQLFDE----SPVQDVFTWTAMVSGYIQNRMVEEARELFD 305
Query: 71 FMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVK 130
M E N V++N+++ GY +ME A ++FD+M R +V T+N++I G+ +
Sbjct: 306 KMP----ERNEVSWNAMLAGYVQGERMEMAKELFDVMPCR----NVSTWNTMITGYAQCG 357
Query: 131 DVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN----- 185
+ A L +M K D V+W A++ G+ Q G A LF M+ G N
Sbjct: 358 KISEAKNLFDKMP----KRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFS 413
Query: 186 --LQTCTVIL------------------DGLF----------KCRFHSEAMSLFRAMEKS 215
L TC ++ G F KC EA LF+ M
Sbjct: 414 SALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK 473
Query: 216 DIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEA 275
DIV +N M+ G D T ++ GL+D+
Sbjct: 474 ----DIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKG 529
Query: 276 EELLMRMEEN-GCPPNRCSYNVFVHGLLR 303
+ M ++ G PN Y V L R
Sbjct: 530 RQYFYTMTQDYGVMPNSQHYACMVDLLGR 558
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 131/315 (41%), Gaps = 57/315 (18%)
Query: 11 IVSYNCLIQGLFK---FGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARC 67
+VS+N +I+G + G+ +E L+E+M + DV +++ ++ G+ + G V AR
Sbjct: 126 LVSWNVMIKGYVRNRNLGKARE----LFEIMPE---RDVCSWNTMLSGYAQNGCVDDARS 178
Query: 68 VMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFD-----LMVRRGCL--------- 113
V M E N V++N+L+ Y +MEEA +F +V CL
Sbjct: 179 VFDRMP----EKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKK 234
Query: 114 -------------PSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGG 160
VV++N++I G+ + +D A ++ +E DV TWTA+V G
Sbjct: 235 IVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEA----RQLFDESPVQDVFTWTAMVSG 290
Query: 161 FCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLD 220
+ Q A+ELF M E +V + +L G + A LF M ++
Sbjct: 291 YIQNRMVEEARELFDKMPERNEV----SWNAMLAGYVQGERMEMAKELFDVMPCRNVS-- 344
Query: 221 IVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLM 280
+N M+ G D ++ MI G G EA L +
Sbjct: 345 --TWNTMITGYAQCGKISEAKNLFDKMPKR----DPVSWAAMIAGYSQSGHSFEALRLFV 398
Query: 281 RMEENGCPPNRCSYN 295
+ME G NR S++
Sbjct: 399 QMEREGGRLNRSSFS 413
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 99/218 (45%), Gaps = 8/218 (3%)
Query: 12 VSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGF 71
VS+ +I G + G E L +M ++G + +FS + + + + G
Sbjct: 375 VSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGR 434
Query: 72 MVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKD 131
+V G E N+L+ YC +EEA +F M + +V++N++I G+ +
Sbjct: 435 LVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK----DIVSWNTMIAGYSRHGF 490
Query: 132 VDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTM-KEHGQVPNLQTCT 190
+ A+ M EGLKPD T A++ G ++ F+TM +++G +PN Q
Sbjct: 491 GEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYA 550
Query: 191 VILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVML 228
++D L + +A +L + M + D ++ +L
Sbjct: 551 CMVDLLGRAGLLEDAHNLMKNMP---FEPDAAIWGTLL 585
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 122/303 (40%), Gaps = 51/303 (16%)
Query: 45 DVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVF 104
D++ +++ + + + G + A V M + V+YN +I GY + E A K+F
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRW----SSVSYNGMISGYLRNGEFELARKLF 118
Query: 105 DLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQV 164
D M R +V++N +I G+ + +++ +A L E++ E DV +W ++ G+ Q
Sbjct: 119 DEMPER----DLVSWNVMIKGYVRNRNLGKARELF-EIMPE---RDVCSWNTMLSGYAQN 170
Query: 165 GKPLAAKELFFTMKEHGQVP---------------------------NLQTCTVILDGLF 197
G A+ +F M E V L + +L G
Sbjct: 171 GCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFV 230
Query: 198 KCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTY 257
K + EA F +M D+V +N ++ G D +
Sbjct: 231 KKKKIVEARQFFDSMNVR----DVVSWNTIITGYAQSGKIDEARQLFDESPVQ----DVF 282
Query: 258 TFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIM 317
T+ M+ G +++EA EL +M E N S+N + G ++ + +++ +M
Sbjct: 283 TWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFDVM 338
Query: 318 KCK 320
C+
Sbjct: 339 PCR 341
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 2/162 (1%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLL-YEMMQKGVMPDVQTFSILVDGFGKEGL 61
SKG +PT Y ++ L + G+ KE ++ EMMQ +P V +++L+ G +G
Sbjct: 325 RSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGK 384
Query: 62 VSGARCVMGFMV-HVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
A + M V N TY +L+ G C Q EA +V + M+ + P V TY+
Sbjct: 385 SMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYH 444
Query: 121 SLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFC 162
+I G C + A+ L EMV++ + P+ W AL C
Sbjct: 445 MMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 130/303 (42%), Gaps = 8/303 (2%)
Query: 7 IQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGAR 66
+ I + N L++ L + R + + EM +G PD ++ IL+ GF EG + A
Sbjct: 148 VNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEAT 207
Query: 67 CVMGFMV----HVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
++ M G ++V Y L+ C ++++A+++ ++R+G Y+ +
Sbjct: 208 HLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHI 267
Query: 123 IHG-W-CKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEH 180
G W + ++R LL E + G P + +++A+ + GK + +E+ M+
Sbjct: 268 EAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSK 327
Query: 181 GQVPNLQTCTVILDGLFKCRFHSEAMSLF-RAMEKSDIDLDIVVYNVMLDGMCXXXXXXX 239
G P + L + EA+S+ + M + + VYNV++ G+C
Sbjct: 328 GFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSME 387
Query: 240 XXXXXXXXXXXXX-XFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFV 298
+ T+ ++ GLC +G EA +++ M P +Y++ +
Sbjct: 388 AVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMI 447
Query: 299 HGL 301
GL
Sbjct: 448 KGL 450
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 92/202 (45%), Gaps = 2/202 (0%)
Query: 33 LLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYC 92
LL E + +G +P + ++S + +EG + V+ M G EP Y + + C
Sbjct: 285 LLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALC 344
Query: 93 LRHQMEEAMKVFDLMVRRG-CLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNE-GLKPD 150
+++EA+ V + + +G CLP+V YN LI G C A+ L +M + +
Sbjct: 345 RAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVAN 404
Query: 151 VVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFR 210
T+ LV G C+ G+ L A ++ M P ++T +++ GL EA+
Sbjct: 405 EETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLE 464
Query: 211 AMEKSDIDLDIVVYNVMLDGMC 232
M D+ + V+ + + +C
Sbjct: 465 EMVSQDMVPESSVWKALAESVC 486
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 119/290 (41%), Gaps = 11/290 (3%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMM----QKGVMPDVQTFSILVDGFGK 58
N +G P SY L++G G+ +E LLY M QKG D+ + IL+D
Sbjct: 179 NYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCD 238
Query: 59 EGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGY--CLRHQMEEAMKVFDLMVRRGCLPSV 116
G V A ++G ++ G++ Y+ + G+ +E ++ + RG +P +
Sbjct: 239 AGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCL 298
Query: 117 VTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFT 176
+Y+++ + + +L M ++G +P + A V C+ GK A +
Sbjct: 299 DSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINK 358
Query: 177 MKEHGQ-VPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKS-DIDLDIVVYNVMLDGMCXX 234
G +P + V++ GL EA+ + M K + Y ++DG+C
Sbjct: 359 EMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRD 418
Query: 235 XXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEE 284
T+++MI+GLC +D E +M +EE
Sbjct: 419 GQFLEASQVMEEMLIKSHFPGVETYHMMIKGLC---DMDRRYEAVMWLEE 465
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 107/268 (39%), Gaps = 9/268 (3%)
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAM----KVFDLMVRRGCLPSVVTYN 120
A V M + G P+ +Y L+ G+CL ++EEA +F + ++G +V Y
Sbjct: 171 ASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYR 230
Query: 121 SLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKP--LAAKELFFTMK 178
L+ C +VD AI +LG+++ +GLK + + G + K L
Sbjct: 231 ILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETL 290
Query: 179 EHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXX 238
G +P L + + + LF+ E + AM + +Y + +C
Sbjct: 291 IRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLK 350
Query: 239 XXXXXXXXXXXXXXXFDTY-TFNIMIRGLCWEGLLDEAEELLMRMEEN-GCPPNRCSYNV 296
T +N++I+GLC +G EA L +M + C N +Y
Sbjct: 351 EAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQT 410
Query: 297 FVHGLLRKLDISRSEKYLQIMKCKG-FP 323
V GL R + + ++ M K FP
Sbjct: 411 LVDGLCRDGQFLEASQVMEEMLIKSHFP 438
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 78/183 (42%), Gaps = 2/183 (1%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G P + SY+ + LF+ G+ EG +L M KG P + V + G +
Sbjct: 292 RGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKE 351
Query: 65 ARCVMGF-MVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRR-GCLPSVVTYNSL 122
A V+ M+ P V YN LI G C + EA+ M ++ C+ + TY +L
Sbjct: 352 AVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTL 411
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
+ G C+ A ++ EM+ + P V T+ ++ G C + + A M
Sbjct: 412 VDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDM 471
Query: 183 VPN 185
VP
Sbjct: 472 VPE 474
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 2/162 (1%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLL-YEMMQKGVMPDVQTFSILVDGFGKEGL 61
SKG +PT Y ++ L + G+ KE ++ EMMQ +P V +++L+ G +G
Sbjct: 325 RSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGK 384
Query: 62 VSGARCVMGFMV-HVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
A + M V N TY +L+ G C Q EA +V + M+ + P V TY+
Sbjct: 385 SMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYH 444
Query: 121 SLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFC 162
+I G C + A+ L EMV++ + P+ W AL C
Sbjct: 445 MMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 130/303 (42%), Gaps = 8/303 (2%)
Query: 7 IQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGAR 66
+ I + N L++ L + R + + EM +G PD ++ IL+ GF EG + A
Sbjct: 148 VNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEAT 207
Query: 67 CVMGFMV----HVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
++ M G ++V Y L+ C ++++A+++ ++R+G Y+ +
Sbjct: 208 HLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHI 267
Query: 123 IHG-W-CKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEH 180
G W + ++R LL E + G P + +++A+ + GK + +E+ M+
Sbjct: 268 EAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSK 327
Query: 181 GQVPNLQTCTVILDGLFKCRFHSEAMSLF-RAMEKSDIDLDIVVYNVMLDGMCXXXXXXX 239
G P + L + EA+S+ + M + + VYNV++ G+C
Sbjct: 328 GFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSME 387
Query: 240 XXXXXXXXXXXXX-XFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFV 298
+ T+ ++ GLC +G EA +++ M P +Y++ +
Sbjct: 388 AVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMI 447
Query: 299 HGL 301
GL
Sbjct: 448 KGL 450
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 92/202 (45%), Gaps = 2/202 (0%)
Query: 33 LLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYC 92
LL E + +G +P + ++S + +EG + V+ M G EP Y + + C
Sbjct: 285 LLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALC 344
Query: 93 LRHQMEEAMKVFDLMVRRG-CLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNE-GLKPD 150
+++EA+ V + + +G CLP+V YN LI G C A+ L +M + +
Sbjct: 345 RAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVAN 404
Query: 151 VVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFR 210
T+ LV G C+ G+ L A ++ M P ++T +++ GL EA+
Sbjct: 405 EETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLE 464
Query: 211 AMEKSDIDLDIVVYNVMLDGMC 232
M D+ + V+ + + +C
Sbjct: 465 EMVSQDMVPESSVWKALAESVC 486
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 119/290 (41%), Gaps = 11/290 (3%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMM----QKGVMPDVQTFSILVDGFGK 58
N +G P SY L++G G+ +E LLY M QKG D+ + IL+D
Sbjct: 179 NYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCD 238
Query: 59 EGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGY--CLRHQMEEAMKVFDLMVRRGCLPSV 116
G V A ++G ++ G++ Y+ + G+ +E ++ + RG +P +
Sbjct: 239 AGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCL 298
Query: 117 VTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFT 176
+Y+++ + + +L M ++G +P + A V C+ GK A +
Sbjct: 299 DSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINK 358
Query: 177 MKEHGQ-VPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKS-DIDLDIVVYNVMLDGMCXX 234
G +P + V++ GL EA+ + M K + Y ++DG+C
Sbjct: 359 EMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRD 418
Query: 235 XXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEE 284
T+++MI+GLC +D E +M +EE
Sbjct: 419 GQFLEASQVMEEMLIKSHFPGVETYHMMIKGLC---DMDRRYEAVMWLEE 465
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 107/268 (39%), Gaps = 9/268 (3%)
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAM----KVFDLMVRRGCLPSVVTYN 120
A V M + G P+ +Y L+ G+CL ++EEA +F + ++G +V Y
Sbjct: 171 ASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYR 230
Query: 121 SLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKP--LAAKELFFTMK 178
L+ C +VD AI +LG+++ +GLK + + G + K L
Sbjct: 231 ILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETL 290
Query: 179 EHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXX 238
G +P L + + + LF+ E + AM + +Y + +C
Sbjct: 291 IRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLK 350
Query: 239 XXXXXXXXXXXXXXXFDTY-TFNIMIRGLCWEGLLDEAEELLMRMEEN-GCPPNRCSYNV 296
T +N++I+GLC +G EA L +M + C N +Y
Sbjct: 351 EAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQT 410
Query: 297 FVHGLLRKLDISRSEKYLQIMKCKG-FP 323
V GL R + + ++ M K FP
Sbjct: 411 LVDGLCRDGQFLEASQVMEEMLIKSHFP 438
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 78/183 (42%), Gaps = 2/183 (1%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G P + SY+ + LF+ G+ EG +L M KG P + V + G +
Sbjct: 292 RGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKE 351
Query: 65 ARCVMGF-MVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRR-GCLPSVVTYNSL 122
A V+ M+ P V YN LI G C + EA+ M ++ C+ + TY +L
Sbjct: 352 AVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTL 411
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
+ G C+ A ++ EM+ + P V T+ ++ G C + + A M
Sbjct: 412 VDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDM 471
Query: 183 VPN 185
VP
Sbjct: 472 VPE 474
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 117/288 (40%)
Query: 15 NCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVH 74
+I + G ++ GL E +KG P T SILV+ G A + +
Sbjct: 708 RSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLE 767
Query: 75 VGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDR 134
+E + V YN+LI +++ A ++++ M G S+ TYN++I + + +D+
Sbjct: 768 KNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDK 827
Query: 135 AICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILD 194
AI + GL D +T ++ + + GK A LF M++ G P + +++
Sbjct: 828 AIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVK 887
Query: 195 GLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXF 254
R H E L +AME++ D+ Y ++
Sbjct: 888 ICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPL 947
Query: 255 DTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLL 302
F+ ++ L G+++EAE +M E G P+ + G +
Sbjct: 948 SHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYM 995
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 151/350 (43%), Gaps = 12/350 (3%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
MK +P++V Y +++ + G+ K EM++ G PD ++ + + G
Sbjct: 178 MKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWG 237
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAM--KVFDL---MVRRGCLPS 115
S + V+ + ++ + + L +++ KV DL MV G P+
Sbjct: 238 RHSAM-----LTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPN 292
Query: 116 VVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFF 175
TY ++ + K + A+ GEM + G P+ VT+++++ + G A L+
Sbjct: 293 EFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYE 352
Query: 176 TMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXX 235
M+ G VP+ TC +L +K + +A+SLF ME++ I D V+ +++
Sbjct: 353 DMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLG 412
Query: 236 XXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYN 295
D T+ M + G + +A +++ M+ P +R +Y
Sbjct: 413 LFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYI 472
Query: 296 VFVHGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLICIYSA-NKGDNA 344
V + + ++ +E+ + + G P DA++ ++ +Y+ N G+ A
Sbjct: 473 VMLQCYAKIQNVDCAEEAFRALSKTGLP-DASSCNDMLNLYTRLNLGEKA 521
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 95/226 (42%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
K I+ V YN LI+ + + G+ + + + M GV +QT++ ++ +G+ +
Sbjct: 768 KNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDK 827
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A + G+ + Y ++I Y +M EA+ +F M ++G P +YN ++
Sbjct: 828 AIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVK 887
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
+ LL M G D+ T+ L+ + + + A++ +KE G
Sbjct: 888 ICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPL 947
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDG 230
+ + +L L K EA + M ++ I D +L G
Sbjct: 948 SHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKG 993
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/333 (20%), Positives = 121/333 (36%), Gaps = 44/333 (13%)
Query: 45 DVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVF 104
DV ++++ KEG ++ + ++ M + + V N +I + + +A +
Sbjct: 601 DVMALGLMLNLRLKEGNLNETKAILNLMFKTDLGSSAV--NRVISSFVREGDVSKAEMIA 658
Query: 105 DLMVRRGCLPSVVTYNSLIHGW---CKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGF 161
D+++R G T +LI + K+K+ R GE P +++ +
Sbjct: 659 DIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLAAGE----SKTPGKSVIRSMIDAY 714
Query: 162 CQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDI 221
+ G A LF E G P T +++++ L H EA + R + +I+LD
Sbjct: 715 VRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDT 774
Query: 222 VVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMI----RGLCWE-------- 269
V YN ++ M T+N MI RGL +
Sbjct: 775 VGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSN 834
Query: 270 -----------------------GLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLD 306
G + EA L M++ G P SYN+ V
Sbjct: 835 ARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRL 894
Query: 307 ISRSEKYLQIMKCKGFPVDANTTELLICIYSAN 339
++ LQ M+ G D +T LI +Y+ +
Sbjct: 895 HHEVDELLQAMERNGRCTDLSTYLTLIQVYAES 927
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%)
Query: 57 GKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSV 116
GK A + M VG++P+V+ Y +LI GY + ++++A ++F M +G LP+V
Sbjct: 700 GKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNV 759
Query: 117 VTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFT 176
TYNS+I G C + A LL EM + G P+ V ++ LVG + GK A+++
Sbjct: 760 FTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKE 819
Query: 177 MKEHGQVPNL 186
M + G +L
Sbjct: 820 MVKKGHYVHL 829
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 59/113 (52%)
Query: 34 LYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCL 93
L M + G+ P V ++ L+DG+ G + A+ + M G PNV TYNS+I G C+
Sbjct: 712 LNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCM 771
Query: 94 RHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEG 146
+ EA + M RGC P+ V Y++L+ K + A ++ EMV +G
Sbjct: 772 AGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
GI P+++ Y LI G G + + EM KG +P+V T++ ++ G G A
Sbjct: 719 GIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREA 778
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRG 111
++ M G PN V Y++L+G ++ EA KV MV++G
Sbjct: 779 CWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 54/121 (44%), Gaps = 2/121 (1%)
Query: 205 AMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIR 264
A++ M++ ID ++ Y ++DG + +T+N MIR
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 767
Query: 265 GLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKL-DISRSEKYLQIMKCKGFP 323
GLC G EA LL ME GC PN Y+ V G LRK +S + K ++ M KG
Sbjct: 768 GLCMAGEFREACWLLKEMESRGCNPNFVVYSTLV-GYLRKAGKLSEARKVIKEMVKKGHY 826
Query: 324 V 324
V
Sbjct: 827 V 827
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%)
Query: 100 AMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVG 159
A+ + M G PSV+ Y +LI G+ ++D+A + EM +G P+V T+ +++
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 767
Query: 160 GFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEK 214
G C G+ A L M+ G PN + ++ L K SEA + + M K
Sbjct: 768 GLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVK 822
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 135 AICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILD 194
A+ L M G+ P V+ +T L+ G+ G+ AKE+F M GQ+PN+ T ++
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 767
Query: 195 GLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVML 228
GL EA L + ME + + VVY+ ++
Sbjct: 768 GLCMAGEFREACWLLKEMESRGCNPNFVVYSTLV 801
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KG P + +YN +I+GL G ++E LL EM +G P+ +S LV K G +S
Sbjct: 753 KGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSE 812
Query: 65 ARCVMGFMVHVGVEPNVVT 83
AR V+ MV G ++V+
Sbjct: 813 ARKVIKEMVKKGHYVHLVS 831
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 113/277 (40%), Gaps = 2/277 (0%)
Query: 25 GRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFM-VHVGVEPNVVT 83
G + E L + GV+ D FSI+V + K G + A V+ M + P+V
Sbjct: 572 GEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYL 631
Query: 84 YNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMV 143
+ ++ Y ++ ++ + + G + YN +I+ + +D EM+
Sbjct: 632 FRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMI 691
Query: 144 NEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHS 203
G P+ VT+ L+ + + ELF K HG V + T+I K + ++
Sbjct: 692 RYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIA-AYGKNKDYT 750
Query: 204 EAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMI 263
S + M+ + + YN +LD D YT+NIMI
Sbjct: 751 NMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMI 810
Query: 264 RGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHG 300
+G +DE ++L ++E+G P+ CSYN +
Sbjct: 811 NIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKA 847
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 79/171 (46%)
Query: 11 IVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMG 70
++SYN +I K + + + M G ++ ++ L+D +GK+ + R ++
Sbjct: 733 VISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILK 792
Query: 71 FMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVK 130
M P+ TYN +I Y + ++E V + G P + +YN+LI +
Sbjct: 793 RMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGG 852
Query: 131 DVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHG 181
V+ A+ L+ EM + PD VT+T LV + + L A + MK+ G
Sbjct: 853 MVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMG 903
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 99/226 (43%), Gaps = 10/226 (4%)
Query: 10 TIVSYNCLIQGLFKFGRWKEGAGLLYEM-----MQKGVMPDVQTFSILVDGFGKEGLVSG 64
V+Y+ +++ L + W L+ E+ QK Q F+ ++ K+G V
Sbjct: 173 NFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSY----QVFNTVIYACTKKGNVKL 228
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A M+ GV PNV T L+G Y +EEA F M + G + Y+S+I
Sbjct: 229 ASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCESA-YSSMIT 287
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
+ +++ D+A ++ M + ++ + W ++ + Q GK A+ + +M+ G P
Sbjct: 288 IYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSP 347
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDG 230
N+ ++ G K A LF + ++ D Y M++G
Sbjct: 348 NIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEG 393
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 69/146 (47%)
Query: 13 SYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFM 72
+Y+ +I + + + ++ M Q V ++ + ++++ + ++G + A ++ M
Sbjct: 281 AYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSM 340
Query: 73 VHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDV 132
G PN++ YN+LI GY +ME A +F + G P +Y S+I GW + +
Sbjct: 341 EAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNY 400
Query: 133 DRAICLLGEMVNEGLKPDVVTWTALV 158
+ A E+ G KP+ L+
Sbjct: 401 EEAKHYYQELKRCGYKPNSFNLFTLI 426
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/373 (19%), Positives = 144/373 (38%), Gaps = 37/373 (9%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
+ G P I++YN LI G K + + GL + + G+ PD ++ +++G+G+
Sbjct: 342 AAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYE 401
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A+ + G +PN +LI + A+K + M GC S + ++
Sbjct: 402 EAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSIL-GIIL 460
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVG--------------KPLA 169
+ KV +D C+L + ++ + ++++LV + + G + A
Sbjct: 461 QAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSA 520
Query: 170 AKELFFTM-----KEHGQVP----------------NLQTCTVILDGLFKCRFHSEAMSL 208
+ + + KE GQ+ NL + ++D SEA L
Sbjct: 521 FESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKL 580
Query: 209 FRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXF-DTYTFNIMIRGLC 267
+ ++ S + LD + +++++ D Y F M+R
Sbjct: 581 YLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQ 640
Query: 268 WEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGFPVDAN 327
L D+ + L R+ ++G N+ YN ++ R L + + M GF +
Sbjct: 641 KCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTV 700
Query: 328 TTELLICIYSANK 340
T +L+ +Y K
Sbjct: 701 TFNVLLDVYGKAK 713
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 84/180 (46%), Gaps = 1/180 (0%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G++P + + L+ GL++ E A + M+K + +S ++ + + L A
Sbjct: 240 GVRPNVATIGMLM-GLYQKNWNVEEAEFAFSHMRKFGIVCESAYSSMITIYTRLRLYDKA 298
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
V+ M V + + ++ Y + +ME A + M G P+++ YN+LI G
Sbjct: 299 EEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITG 358
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+ K+ ++ A L + N GL+PD ++ +++ G+ + AK + +K G PN
Sbjct: 359 YGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPN 418
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 84/191 (43%), Gaps = 1/191 (0%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G P V++N L+ K +K+ L + GV+ DV +++ ++ +GK +
Sbjct: 694 GFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVV-DVISYNTIIAAYGKNKDYTNM 752
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ M G ++ YN+L+ Y QME+ + M + P TYN +I+
Sbjct: 753 SSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINI 812
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+ + +D +L E+ GL PD+ ++ L+ + G A L M+ +P+
Sbjct: 813 YGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPD 872
Query: 186 LQTCTVILDGL 196
T T ++ L
Sbjct: 873 KVTYTNLVTAL 883
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/298 (19%), Positives = 122/298 (40%), Gaps = 11/298 (3%)
Query: 25 GRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTY 84
G+ + +L M G P++ ++ L+ G+GK + A+ + + ++G+EP+ +Y
Sbjct: 328 GKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSY 387
Query: 85 NSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVN 144
S+I G+ EEA + + R G P+ +LI+ K D D AI + +M
Sbjct: 388 RSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTG 447
Query: 145 EGLKPDVVTWTALVGGFCQVGK----PLAAKELFFTMKEHGQVPNLQTC-TVILDGLFKC 199
G + + ++ + +VGK P K F H + QT + ++ K
Sbjct: 448 IGCQYSSIL-GIILQAYEKVGKIDVVPCVLKGSF-----HNHIRLNQTSFSSLVMAYVKH 501
Query: 200 RFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTF 259
+ + L R + D + +Y++++ + +
Sbjct: 502 GMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHIT 561
Query: 260 NIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIM 317
+ MI G EAE+L + ++ +G +R +++ V ++ + + L+IM
Sbjct: 562 STMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIM 619
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 72/134 (53%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLV 62
+SKG + SY+ +I L K GR +E L EM ++G+ PDV ++ L++ K ++
Sbjct: 389 SSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMI 448
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
A+ + M G + N+ TYN LI + EE++++FD M+ RG P Y SL
Sbjct: 449 RPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSL 508
Query: 123 IHGWCKVKDVDRAI 136
I G CK ++ A+
Sbjct: 509 IEGLCKETKIEAAM 522
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 100/232 (43%), Gaps = 3/232 (1%)
Query: 2 KNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMP-DVQTFSILVDGFGKEG 60
K G+ P Y I L R E A + E++ G P D L+
Sbjct: 284 KRKLGVAPRSSDYRAFILDLISAKRLTE-AKEVAEVIVSGKFPMDNDILDALIGSVSAVD 342
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
S ++ +MV G P + T + L C + + +K ++L+ +G + +Y+
Sbjct: 343 PDSAVEFLV-YMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYS 401
Query: 121 SLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEH 180
+I CK V + L EM EGL PDV + AL+ C+ AK+L+ M
Sbjct: 402 LMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVE 461
Query: 181 GQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMC 232
G NL T V++ L + E++ LF M + I+ D +Y +++G+C
Sbjct: 462 GCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLC 513
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 1/141 (0%)
Query: 35 YEMMQ-KGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCL 93
YE++ KG ++Q++S+++ K G V + + M G+ P+V YN+LI C
Sbjct: 385 YELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCK 444
Query: 94 RHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVT 153
+ A K++D M GC ++ TYN LI + + + ++ L +M+ G++PD
Sbjct: 445 AEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETI 504
Query: 154 WTALVGGFCQVGKPLAAKELF 174
+ +L+ G C+ K AA E+F
Sbjct: 505 YMSLIEGLCKETKIEAAMEVF 525
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 118/291 (40%), Gaps = 1/291 (0%)
Query: 17 LIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVG 76
++ L K R + +L E+ PD + ++ + F G + + V+ +G
Sbjct: 229 ILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLG 288
Query: 77 VEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAI 136
V P Y + I ++ EA +V +++V G P + G D D A+
Sbjct: 289 VAPRSSDYRAFILDLISAKRLTEAKEVAEVIVS-GKFPMDNDILDALIGSVSAVDPDSAV 347
Query: 137 CLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGL 196
L MV+ G P + T + L C+ K + + + G LQ+ ++++ L
Sbjct: 348 EFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFL 407
Query: 197 FKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDT 256
K E+ + + M+K + D+ +YN +++ C +
Sbjct: 408 CKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNL 467
Query: 257 YTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDI 307
T+N++IR L EG +E+ L +M E G P+ Y + GL ++ I
Sbjct: 468 TTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKI 518
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 74/178 (41%)
Query: 33 LLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYC 92
L M+ G +P ++T S L + + G + +Y+ +I C
Sbjct: 349 FLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLC 408
Query: 93 LRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVV 152
++ E+ M + G P V YN+LI CK + + A L EM EG K ++
Sbjct: 409 KAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLT 468
Query: 153 TWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFR 210
T+ L+ + G+ + LF M E G P+ +++GL K AM +FR
Sbjct: 469 TYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFR 526
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 51/100 (51%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G+ P + YN LI+ K + L EM +G ++ T+++L+ +EG
Sbjct: 426 EGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEE 485
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVF 104
+ + M+ G+EP+ Y SLI G C ++E AM+VF
Sbjct: 486 SLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVF 525
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 117/279 (41%), Gaps = 1/279 (0%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
MK+S QP + +Y+ LI+ + + + LL +M ++G+ P+ T++ L+D +GK
Sbjct: 211 MKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAK 270
Query: 61 L-VSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTY 119
+ V ++ + +P+ T NS + + Q+E ++ G P++ T+
Sbjct: 271 MFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTF 330
Query: 120 NSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKE 179
N L+ + K + + ++ M +VT+ ++ F + G + LF M+
Sbjct: 331 NILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQS 390
Query: 180 HGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXX 239
P+ T ++ + + + R +E SDI LD+V +N ++D
Sbjct: 391 ERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAE 450
Query: 240 XXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEEL 278
D T+ M++ G+ +EL
Sbjct: 451 MKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKEL 489
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 86/190 (45%), Gaps = 6/190 (3%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
S GI+P I ++N L+ K G +K+ + ++ M + + T+++++D FG+ G +
Sbjct: 320 SSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLK 379
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
+ M + P+ VT SL+ Y + ++ V + +V +N L+
Sbjct: 380 QMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLV 439
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
+ +++ +L M +G KPD +T+ +V + G KEL HG V
Sbjct: 440 DAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKEL------HGVV 493
Query: 184 PNLQTCTVIL 193
++ V++
Sbjct: 494 ESVGEAQVVV 503
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 3/204 (1%)
Query: 98 EEAMKVFDLMVRR-GCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTA 156
E A++VF+L+ + P+V Y LI K K ++A L EM+NEG + +TA
Sbjct: 131 ESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTA 190
Query: 157 LVGGFCQVGKPLAAKELFFTMK-EHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKS 215
LV + + G+ AA L MK H P++ T ++++ + + L M +
Sbjct: 191 LVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQ 250
Query: 216 DIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXX-XFDTYTFNIMIRGLCWEGLLDE 274
I + + YN ++D D++T N +R G ++
Sbjct: 251 GIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEM 310
Query: 275 AEELLMRMEENGCPPNRCSYNVFV 298
E + + +G PN ++N+ +
Sbjct: 311 MENCYEKFQSSGIEPNIRTFNILL 334
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 65/147 (44%), Gaps = 6/147 (4%)
Query: 10 TIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVM 69
TIV+YN +I + G K+ L M + + P T LV +G+ V+
Sbjct: 361 TIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVL 420
Query: 70 GFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGW--- 126
F+ + + ++V +N L+ Y + E V +LM ++G P +TY +++ +
Sbjct: 421 RFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRIS 480
Query: 127 ---CKVKDVDRAICLLGEMVNEGLKPD 150
VK++ + +GE KPD
Sbjct: 481 GMTTHVKELHGVVESVGEAQVVVKKPD 507
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 107/255 (41%), Gaps = 29/255 (11%)
Query: 2 KNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGL 61
+NS+ P ++ N LI+GL + R++ M++ GV PD TF ++ K G
Sbjct: 84 RNSEERNPFVL--NALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGF 141
Query: 62 VSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNS 121
R + + V+ + SL+ Y Q++ A +VF+ R S++ +N
Sbjct: 142 RWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNV 201
Query: 122 LIHGWCKVKDVDRAICLLGEM---------------VNEG----------LKPD--VVTW 154
LI+G+C+ KD+ A L M V+ G L P+ VV+W
Sbjct: 202 LINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSW 261
Query: 155 TALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEK 214
T L+ GF Q G A +F M E G PN T +L K + + +
Sbjct: 262 TTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILD 321
Query: 215 SDIDLDIVVYNVMLD 229
+ I LD + ++D
Sbjct: 322 NGIKLDRAIGTALVD 336
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 102/221 (46%), Gaps = 8/221 (3%)
Query: 8 QPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARC 67
+ +VS+ LI G + G ++ +EM++KG+ P+ T + ++ K G +
Sbjct: 255 EKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIR 314
Query: 68 VMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWC 127
+ G+++ G++ + +L+ Y +++ A VF M + ++++ ++I GW
Sbjct: 315 IHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHK----DILSWTAMIQGWA 370
Query: 128 KVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMK-EHGQVPNL 186
+AI +M+ G KPD V + A++ + F +M+ ++ P L
Sbjct: 371 VHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTL 430
Query: 187 QTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVM 227
+ +++D L + +EA L +E I+ D+ + +
Sbjct: 431 KHYVLVVDLLGRAGKLNEAHEL---VENMPINPDLTTWAAL 468
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 13/220 (5%)
Query: 14 YNCLIQGLFKFGRWKEGAGLLYEMMQKGVM---PDVQTFSILVD---GFGKEGLVS---- 63
YN +I K G+ + M+ + P ++T+ IL G G ++
Sbjct: 210 YNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYM 269
Query: 64 -GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLM-VRRGCLPSVVTYNS 121
R + MV G+EP+V N L+ GY L + +A+++F M V C P+ TY+
Sbjct: 270 ETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDY 329
Query: 122 LIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHG 181
LIHG C A LL EM +G P+ ++ +LV F G+ A + + M E+G
Sbjct: 330 LIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENG 389
Query: 182 QVPNLQTCTVILDGLFKCRFHSEAMSLFRAM-EKSDIDLD 220
+V + + ++D + + EA L + EK +D D
Sbjct: 390 RVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQLVDRD 429
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 89/190 (46%), Gaps = 11/190 (5%)
Query: 1 MKNSKGIQ--PTIVSYNCLIQGLFKFGR--------WKEGAGLLYEMMQKGVMPDVQTFS 50
M SK ++ PTI +Y+ L + L G + L +M+ G+ PDV +
Sbjct: 233 MVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALN 292
Query: 51 ILVDGFGKEGLVSGA-RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVR 109
LV G+ V+ A R V EPN TY+ LI G C + + A ++ M
Sbjct: 293 CLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKG 352
Query: 110 RGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLA 169
+G +P+ +YNSL++ + ++D A+ L EM+ G D +++ LV C+ GK
Sbjct: 353 KGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDE 412
Query: 170 AKELFFTMKE 179
A L ++E
Sbjct: 413 ATRLLEMLRE 422
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 103/207 (49%), Gaps = 5/207 (2%)
Query: 7 IQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGAR 66
+ +V++N +I G + R ++G L M+++G+ P+ S + G + + R
Sbjct: 245 VNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGR 304
Query: 67 CVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGW 126
+ + + +V SLI YC ++ +A K+F++M ++ VV +N++I G+
Sbjct: 305 QIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKK----DVVAWNAMISGY 360
Query: 127 CKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTM-KEHGQVPN 185
+ + D+A+CL EM++ ++PD +T+ A++ G F +M +++ P
Sbjct: 361 AQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQ 420
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAM 212
T ++D L + EA+ L R+M
Sbjct: 421 PDHYTCMVDLLGRAGKLEEALKLIRSM 447
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 119/287 (41%), Gaps = 19/287 (6%)
Query: 8 QPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARC 67
+P SYN ++ + +++ M K D +++ ++ G+ + G + AR
Sbjct: 121 EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK----DAASWNTMITGYARRGEMEKARE 176
Query: 68 VMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWC 127
+ M+ E N V++N++I GY +E+A F + RG VV + ++I G+
Sbjct: 177 LFYSMM----EKNEVSWNAMISGYIECGDLEKASHFFKVAPVRG----VVAWTAMITGYM 228
Query: 128 KVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQ 187
K K V+ A + +M + ++VTW A++ G+ + +P +LF M E G PN
Sbjct: 229 KAKKVELAEAMFKDMT---VNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSS 285
Query: 188 TCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXX 247
+ L G + + + + KS + D+ ++ C
Sbjct: 286 GLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVM 345
Query: 248 XXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSY 294
D +N MI G G D+A L M +N P+ ++
Sbjct: 346 KKK----DVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITF 388
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 98/220 (44%), Gaps = 9/220 (4%)
Query: 14 YNCLIQGLFKFGRWKEGAGLLYEMMQKG-VMPDVQTFSILVDGFGKEGLVSGARCVMGFM 72
+N LI+G + G L EM G V PD T+ L+ V + +
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 73 VHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDV 132
+ G + NSL+ Y + A KVFD M + +V +NS+I+G+ +
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEK----DLVAWNSVINGFAENGKP 203
Query: 133 DRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVI 192
+ A+ L EM ++G+KPD T +L+ ++G K + M + G NL + V+
Sbjct: 204 EEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVL 263
Query: 193 LDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMC 232
LD +C EA +LF M +D + V + ++ G+
Sbjct: 264 LDLYARCGRVEEAKTLFDEM----VDKNSVSWTSLIVGLA 299
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 105/224 (46%), Gaps = 10/224 (4%)
Query: 11 IVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMG 70
+V++N +I G + G+ +E L EM KG+ PD T L+ K G ++ + V
Sbjct: 187 LVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHV 246
Query: 71 FMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVK 130
+M+ VG+ N+ + N L+ Y ++EEA +FD MV + V++ SLI G
Sbjct: 247 YMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNS----VSWTSLIVGLAVNG 302
Query: 131 DVDRAICLLGEM-VNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV-PNLQT 188
AI L M EGL P +T+ ++ G E F M+E ++ P ++
Sbjct: 303 FGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEH 362
Query: 189 CTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMC 232
++D L + +A ++M + ++V++ +L G C
Sbjct: 363 FGCMVDLLARAGQVKKAYEYIKSM---PMQPNVVIWRTLL-GAC 402
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 87/197 (44%), Gaps = 6/197 (3%)
Query: 35 YEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLR 94
Y++ K D+ ++ +++GF + G A + M G++P+ T SL+
Sbjct: 176 YKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKI 235
Query: 95 HQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTW 154
+ +V M++ G ++ + N L+ + + V+ A L EMV++ + V+W
Sbjct: 236 GALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDK----NSVSW 291
Query: 155 TALVGGFCQVGKPLAAKELFFTMKE-HGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAM- 212
T+L+ G G A ELF M+ G +P T IL C E FR M
Sbjct: 292 TSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMR 351
Query: 213 EKSDIDLDIVVYNVMLD 229
E+ I+ I + M+D
Sbjct: 352 EEYKIEPRIEHFGCMVD 368
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 118/274 (43%), Gaps = 10/274 (3%)
Query: 70 GFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCL-PSVVTYNSLIHGWCK 128
GF+ G+ PN++TYN + Y + E A++ + L + L PS+ T+ L+ G
Sbjct: 154 GFINQAGIAPNIITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVS 213
Query: 129 VKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEH--GQVPNL 186
++++A+ + +M +G D V ++ L+ G + +L+ +KE G V +
Sbjct: 214 NDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDG 273
Query: 187 QTCTVILDGLFKCRFHSEAMSLFRAM--EKSDIDLDIVVYNVMLDGMCX-----XXXXXX 239
++ G F EAM + E S + + + YN +L+ +
Sbjct: 274 VVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLF 333
Query: 240 XXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVH 299
+ TFN+M+ G C G +EA E+ +M + C P+ S+N ++
Sbjct: 334 DAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMN 393
Query: 300 GLLRKLDISRSEKYLQIMKCKGFPVDANTTELLI 333
L ++ +EK M+ K D T LL+
Sbjct: 394 QLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLM 427
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 139/323 (43%), Gaps = 16/323 (4%)
Query: 8 QPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARC 67
+PTI + N ++ + ++ L + Q G+ P++ T++++ + V
Sbjct: 127 RPTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLD---VRKPEI 183
Query: 68 VMG----FMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
+ F+ + + P++ T+ L+ G +E+AM++ + M +G + V Y+ L+
Sbjct: 184 ALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLM 243
Query: 124 HGWCKVKDVDRAICLLGEMVNE--GLKPDVVTWTALVGGFCQVGKPLAAKELFF-TMKEH 180
G K D D + L E+ + G D V + L+ G+ A E + + E+
Sbjct: 244 MGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGEN 303
Query: 181 GQVP-NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSD-----IDLDIVVYNVMLDGMCXX 234
+V + +L+ L + EA+ LF A++K + +++ +NVM++G C
Sbjct: 304 SKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAG 363
Query: 235 XXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSY 294
DT +FN ++ LC LL EAE+L MEE P+ +Y
Sbjct: 364 GKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTY 423
Query: 295 NVFVHGLLRKLDISRSEKYLQIM 317
+ + ++ I Y + M
Sbjct: 424 GLLMDTCFKEGKIDEGAAYYKTM 446
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 3/159 (1%)
Query: 74 HVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVD 133
H+ V N+ T+N ++ GYC + EEAM+VF M C P +++N+L++ C + +
Sbjct: 345 HLAV--NLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLA 402
Query: 134 RAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVIL 193
A L GEM + +KPD T+ L+ + GK + TM E PNL +
Sbjct: 403 EAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQ 462
Query: 194 DGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMC 232
D L K +A S F M S + +D Y ++ +
Sbjct: 463 DQLIKAGKLDDAKSFFDMM-VSKLKMDDEAYKFIMRALS 500
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 128/321 (39%), Gaps = 14/321 (4%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMM--QKGVMPDVQTFSILVDGFGKEG 60
N GI P I++YN + Q R E A Y++ + P + TF ILV G
Sbjct: 157 NQAGIAPNIITYNLIFQAYLDV-RKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSND 215
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRR--GCLPSVVT 118
+ A + M G + V Y+ L+ G + +K++ + + G + V
Sbjct: 216 NLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVV 275
Query: 119 YNSLIHGWCKVKDVDRAICLLGEMV--NEGLKPDVVTWTALVGGFCQVGKPLAAKELFFT 176
Y L+ G+ + A+ E V N ++ + + ++ + GK A +LF
Sbjct: 276 YGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDA 335
Query: 177 MKEHGQVP-----NLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGM 231
+K+ P NL T V+++G EAM +FR M D + +N +++ +
Sbjct: 336 VKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQL 395
Query: 232 CXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNR 291
C D YT+ +++ EG +DE M E+ PN
Sbjct: 396 CDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNL 455
Query: 292 CSYNVFVHGLLR--KLDISRS 310
YN L++ KLD ++S
Sbjct: 456 AVYNRLQDQLIKAGKLDDAKS 476
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/342 (19%), Positives = 134/342 (39%), Gaps = 45/342 (13%)
Query: 7 IQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSIL-------------- 52
+ P+I ++ L++GL ++ + +M KG + D +S L
Sbjct: 197 LNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVL 256
Query: 53 ---------VDGFGKEGLVSGARCVMGFMVHVGVEP----------------NVVTYNSL 87
+ GF +G+V G FM + E + + YN +
Sbjct: 257 KLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYV 316
Query: 88 IGGYCLRHQMEEAMKVFDLMVRRGCLP-----SVVTYNSLIHGWCKVKDVDRAICLLGEM 142
+ + +EA+K+FD + + P ++ T+N +++G+C + A+ + +M
Sbjct: 317 LEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQM 376
Query: 143 VNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFH 202
+ PD +++ L+ C A++L+ M+E P+ T +++D FK
Sbjct: 377 GDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKI 436
Query: 203 SEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIM 262
E + ++ M +S++ ++ VYN + D + D + +
Sbjct: 437 DEGAAYYKTMVESNLRPNLAVYNRLQDQLI-KAGKLDDAKSFFDMMVSKLKMDDEAYKFI 495
Query: 263 IRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRK 304
+R L G LDE +++ M ++ FV LRK
Sbjct: 496 MRALSEAGRLDEMLKIVDEMLDDDTVRVSEELQEFVKEELRK 537
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 133/325 (40%), Gaps = 26/325 (8%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLL---YEMMQKGVMPDVQTFSILVDGFGKEGLV 62
G + S++ ++ L +FG G+L E++ G PD L+ G G V
Sbjct: 16 GSTASSNSWSTIVPALARFG----SIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYV 71
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
S R + G++ G N NSL+ Y +E+A KVFD M P V+++NSL
Sbjct: 72 SLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPD----PDVISWNSL 127
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVG-KPLAAKELFFTMKEHG 181
+ G+ + ICL E+ + P+ ++TA + ++ PL A +K
Sbjct: 128 VSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGL 187
Query: 182 QVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSD-IDLDIVVYNVMLDGMCXXXXXXXX 240
+ N+ ++D KC F +A+ +F+ ME+ D + + +V + +G
Sbjct: 188 EKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFH 247
Query: 241 XXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHG 300
DT T+N +I G + A ++L M PN S+N + G
Sbjct: 248 QMPNP---------DTVTYNELIDAFVKSGDFNNAFQVLSDMPN----PNSSSWNTILTG 294
Query: 301 LLRKLDISRSEKYLQIMKCKGFPVD 325
+ + ++ M G D
Sbjct: 295 YVNSEKSGEATEFFTKMHSSGVRFD 319
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 95/216 (43%)
Query: 13 SYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFM 72
+Y +I L K GR L +M ++ + P FS LVD GK G + + V M
Sbjct: 315 TYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEM 374
Query: 73 VHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDV 132
G P+ + SLI Y +++ A++++D M + G P+ Y +I K +
Sbjct: 375 QGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKL 434
Query: 133 DRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVI 192
+ A+ + +M G P T++ L+ G+ +A +++ +M G P L + +
Sbjct: 435 EVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISL 494
Query: 193 LDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVML 228
L L R A + M+ +D+ +V++
Sbjct: 495 LTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLM 530
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 1/158 (0%)
Query: 1 MKNSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEG 60
MK K ++P+ ++ L+ + K GR + EM G P F L+D + K G
Sbjct: 339 MKERK-LRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAG 397
Query: 61 LVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYN 120
+ A + M G PN Y +I + ++E AM VF M + G LP+ TY+
Sbjct: 398 KLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYS 457
Query: 121 SLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALV 158
L+ VD A+ + M N GL+P + ++ +L+
Sbjct: 458 CLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLL 495
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 133/337 (39%), Gaps = 35/337 (10%)
Query: 13 SYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFM 72
+YN +IQ L K + + + + G D QT++ L+ F +GL A + M
Sbjct: 245 AYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESM 304
Query: 73 VHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDV 132
+ TY +I +++ A K+F M R PS ++SL+ K +
Sbjct: 305 EKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRL 364
Query: 133 DRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVI 192
D ++ + EM G +P + +L+ + + GK A L+ MK+ G PN T+I
Sbjct: 365 DTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMI 424
Query: 193 LDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXX 252
++ K AM++F+ MEK+ Y+ +L+
Sbjct: 425 IESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLE----------------------- 461
Query: 253 XFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEK 312
M G G +D A ++ M G P SY + L K + + K
Sbjct: 462 ---------MHAG---SGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGK 509
Query: 313 YLQIMKCKGFPVDANTTELLICIYSANKGDNAFQELQ 349
L MK G+ VD +++L+ D A + L+
Sbjct: 510 ILLEMKAMGYSVDVCASDVLMIYIKDASVDLALKWLR 546
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 96/227 (42%), Gaps = 9/227 (3%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G +P+ + LI K G+ L EM + G P+ ++++++ K G + A
Sbjct: 378 GHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVA 437
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
V M G P TY+ L+ + Q++ AMK+++ M G P + +Y SL+
Sbjct: 438 MTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTL 497
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+ VD A +L EM G DV L+ LA K L F M G
Sbjct: 498 LANKRLVDVAGKILLEMKAMGYSVDVCASDVLMIYIKDASVDLALKWLRF-MGSSG---- 552
Query: 186 LQTCTVILDGLF----KCRFHSEAMSLFRAMEKSDIDLDIVVYNVML 228
++T I+ LF K + A L + S +D+V+Y +L
Sbjct: 553 IKTNNFIIRQLFESCMKNGLYDSARPLLETLVHSAGKVDLVLYTSIL 599
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 117/290 (40%), Gaps = 15/290 (5%)
Query: 14 YNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMV 73
+N L+ L K G + GL +MM GV D TFS + F V G + GF++
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFIL 222
Query: 74 HVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVD 133
G NSL+ Y +++ A KVFD M R V+++NS+I+G+ +
Sbjct: 223 KSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTER----DVISWNSIINGYVSNGLAE 278
Query: 134 RAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQT-CTVI 192
+ + + +M+ G++ D+ T ++ G C + ++ ++ C +
Sbjct: 279 KGLSVFVQMLVSGIEIDLATIVSVFAG-CADSRLISLGRAVHSIGVKACFSREDRFCNTL 337
Query: 193 LDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXX 252
LD KC A ++FR M D +V Y M+ G
Sbjct: 338 LDMYSKCGDLDSAKAVFREMS----DRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGI 393
Query: 253 XFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLL 302
D YT ++ LLDE + + ++EN +++FV L
Sbjct: 394 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEND-----LGFDIFVSNAL 438
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 129/327 (39%), Gaps = 13/327 (3%)
Query: 10 TIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVM 69
++VSY +I G + G E L EM ++G+ PDV T + +++ + L+ + V
Sbjct: 361 SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVH 420
Query: 70 GFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKV 129
++ + ++ N+L+ Y M+EA VF M + ++++N++I G+ K
Sbjct: 421 EWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMR----VKDIISWNTIIGGYSKN 476
Query: 130 KDVDRAICLLGEMVNEG-LKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQT 188
+ A+ L ++ E PD T ++ + +E+ + +G +
Sbjct: 477 CYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHV 536
Query: 189 CTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXX 248
++D KC A LF + D+V + VM+ G
Sbjct: 537 ANSLVDMYAKCGALLLAHMLFDDIASK----DLVSWTVMIAGYGMHGFGKEAIALFNQMR 592
Query: 249 XXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRM-EENGCPPNRCSYNVFVHGLLRKLDI 307
D +F ++ GL+DE M E P Y V L R D+
Sbjct: 593 QAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDL 652
Query: 308 SRSEKYLQIMKCKGFPVDANTTELLIC 334
++ ++++ M P DA L+C
Sbjct: 653 IKAYRFIENMP---IPPDATIWGALLC 676
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 123/322 (38%), Gaps = 54/322 (16%)
Query: 10 TIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVM 69
TIVS + L KE G M+ G V + LVD + K G + AR +
Sbjct: 238 TIVSVLPAVSALRLISVGKEIHGY---AMRSGFDSLVNISTALVDMYAKCGSLETARQLF 294
Query: 70 GFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTY---------- 119
M+ E NVV++NS+I Y +EAM +F M+ G P+ V+
Sbjct: 295 DGML----ERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADL 350
Query: 120 -------------------------NSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTW 154
NSLI +CK K+VD A + G++ + L V+W
Sbjct: 351 GDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTL----VSW 406
Query: 155 TALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEK 214
A++ GF Q G+P+ A F M+ P+ T ++ + + A + + +
Sbjct: 407 NAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMR 466
Query: 215 SDIDLDIVVYNVMLD--GMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLL 272
S +D ++ V ++D C T+N MI G G
Sbjct: 467 SCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVT------TWNAMIDGYGTHGFG 520
Query: 273 DEAEELLMRMEENGCPPNRCSY 294
A EL M++ PN ++
Sbjct: 521 KAALELFEEMQKGTIKPNGVTF 542
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 81/174 (46%), Gaps = 4/174 (2%)
Query: 10 TIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVM 69
T+VS+N +I G + GR + +M + V PD T+ ++ + + A+ +
Sbjct: 402 TLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIH 461
Query: 70 GFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKV 129
G ++ ++ NV +L+ Y + A +FD+M R V T+N++I G+
Sbjct: 462 GVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSER----HVTTWNAMIDGYGTH 517
Query: 130 KDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
A+ L EM +KP+ VT+ +++ G A + F+ MKE+ +
Sbjct: 518 GFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSI 571
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 100/225 (44%), Gaps = 10/225 (4%)
Query: 7 IQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMP-DVQTFSILVDGFGKEGLVSGA 65
++ +VS+N +I + KE + +M+ +GV P DV L G +
Sbjct: 298 LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGAL-HACADLGDLERG 356
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
R + V +G++ NV NSLI YC +++ A +F + R ++V++N++I G
Sbjct: 357 RFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSR----TLVSWNAMILG 412
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+ + A+ +M + +KPD T+ +++ ++ AK + + N
Sbjct: 413 FAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKN 472
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDG 230
+ T ++D KC A +F M + + +N M+DG
Sbjct: 473 VFVTTALVDMYAKCGAIMIARLIFDMMSER----HVTTWNAMIDG 513
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 91/219 (41%), Gaps = 8/219 (3%)
Query: 12 VSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGF 71
V Y+ +++G K + M V P V F+ L+ G E + + + G
Sbjct: 101 VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 160
Query: 72 MVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKD 131
+V G ++ L Y Q+ EA KVFD M R +V++N+++ G+ +
Sbjct: 161 LVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPER----DLVSWNTIVAGYSQNGM 216
Query: 132 VDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTV 191
A+ ++ M E LKP +T +++ + KE+ G + T
Sbjct: 217 ARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTA 276
Query: 192 ILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDG 230
++D KC A LF M ++ ++V +N M+D
Sbjct: 277 LVDMYAKCGSLETARQLFDGM----LERNVVSWNSMIDA 311
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 96/204 (47%), Gaps = 6/204 (2%)
Query: 11 IVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGV-MPDVQTFSILVDGFGKEGLVSGARCVM 69
+ S+ LI G + G+ E + EM ++ V + D S +V R V
Sbjct: 202 LYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVH 261
Query: 70 GFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKV 129
G ++ +G + V N+LI Y + A +F M R VV++ SLI G +
Sbjct: 262 GLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHR----DVVSWTSLIVGMAQH 317
Query: 130 KDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTM-KEHGQVPNLQT 188
++A+ L +MV+ G+KP+ VT+ L+ VG +ELF +M K++G P+LQ
Sbjct: 318 GQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQH 377
Query: 189 CTVILDGLFKCRFHSEAMSLFRAM 212
T +LD L + EA +L M
Sbjct: 378 YTCLLDLLGRSGLLDEAENLIHTM 401
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 10/220 (4%)
Query: 12 VSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGF 71
+S+ ++ G K GR KE A L+ ++ + ++ +++ L+ GF + G A V
Sbjct: 172 ISWTAMVSGYAKSGR-KEEALELFRILP---VKNLYSWTALISGFVQSGKGLEAFSVFTE 227
Query: 72 MVHVGVEP-NVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVK 130
M V+ + + +S++G +V L++ G V N+LI + K
Sbjct: 228 MRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCS 287
Query: 131 DVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCT 190
DV A + M + DVV+WT+L+ G Q G+ A L+ M HG PN T
Sbjct: 288 DVIAAKDIFSRMRHR----DVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFV 343
Query: 191 VILDGLFKCRFHSEAMSLFRAMEKS-DIDLDIVVYNVMLD 229
++ F + LF++M K I + Y +LD
Sbjct: 344 GLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLD 383
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/335 (20%), Positives = 131/335 (39%), Gaps = 29/335 (8%)
Query: 7 IQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGAR 66
++P ++ L++ G G + + D S LVD + K GL++ A+
Sbjct: 101 LRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAK 160
Query: 67 CVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGW 126
V + N +++ +++ GY + EEA+++F ++ + ++ ++ +LI G+
Sbjct: 161 AVFDSIR----VKNTISWTAMVSGYAKSGRKEEALELFRILP----VKNLYSWTALISGF 212
Query: 127 CKVKDVDRAICLLGEMVNEGLKP-DVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+ A + EM E + D + +++VG + +A +++ HG V
Sbjct: 213 VQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQV------HGLVIA 266
Query: 186 L--QTCTVILDGLF----KCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXX 239
L +C I + L KC A +F M D+V + ++ GM
Sbjct: 267 LGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHR----DVVSWTSLIVGMAQHGQAEK 322
Query: 240 XXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEEN-GCPPNRCSYNVFV 298
+ TF +I G +++ EL M ++ G P+ Y +
Sbjct: 323 ALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLL 382
Query: 299 HGLLRKLDISRSEKYLQIMKCKGFPVDANTTELLI 333
L R + +E + M FP D T L+
Sbjct: 383 DLLGRSGLLDEAENLIHTMP---FPPDEPTWAALL 414
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 105/227 (46%), Gaps = 12/227 (5%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
S G+ P ++ +++ K +KEG + +++ G D+ + L+ + + G +
Sbjct: 127 SLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLE 186
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLI 123
A V H +VV+Y +LI GY R +E A K+FD + + VV++N++I
Sbjct: 187 DAHKVFDKSPH----RDVVSYTALIKGYASRGYIENAQKLFDEIPVK----DVVSWNAMI 238
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
G+ + + A+ L +M+ ++PD T +V Q G +++ + +HG
Sbjct: 239 SGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFG 298
Query: 184 PNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDG 230
NL+ ++D KC A LF + D++ +N ++ G
Sbjct: 299 SNLKIVNALIDLYSKCGELETACGLFERLPYK----DVISWNTLIGG 341
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 86/188 (45%), Gaps = 8/188 (4%)
Query: 8 QPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARC 67
+P ++ +N + +G L M+ G++P+ TF ++ K +
Sbjct: 96 EPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQ 155
Query: 68 VMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWC 127
+ G ++ +G + ++ + SLI Y ++E+A KVFD R VV+Y +LI G+
Sbjct: 156 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHR----DVVSYTALIKGYA 211
Query: 128 KVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQ 187
++ A L E+ + DVV+W A++ G+ + G A ELF M + P+
Sbjct: 212 SRGYIENAQKLFDEIPVK----DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDES 267
Query: 188 TCTVILDG 195
T ++
Sbjct: 268 TMVTVVSA 275
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 113/286 (39%), Gaps = 45/286 (15%)
Query: 11 IVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMG 70
+VS+N +I G + G +KE L +MM+ V PD T +V + G + R V
Sbjct: 231 VVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHL 290
Query: 71 FMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVK 130
++ G N+ N+LI Y ++E A +F+ + + V+++N+LI G+ +
Sbjct: 291 WIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK----DVISWNTLIGGYTHMN 346
Query: 131 DVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAK--ELFFTMKEHGQVPNLQT 188
A+ L EM+ G P+ VT +++ +G + ++ + G
Sbjct: 347 LYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSL 406
Query: 189 CTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXX 248
T ++D KC DI+ V+N +L
Sbjct: 407 RTSLIDMYAKC---------------GDIEAAHQVFNSILHKSLS--------------- 436
Query: 249 XXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSY 294
++N MI G G D + +L RM + G P+ ++
Sbjct: 437 ---------SWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITF 473
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 87/164 (53%), Gaps = 2/164 (1%)
Query: 35 YEMMQKGVMP-DVQTFSILVDGF-GKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYC 92
+ + K + P DV+ F+++++G+ V+ A+ + M + + PN +Y+ +I +
Sbjct: 246 FMLASKKLFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFS 305
Query: 93 LRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVV 152
+ ++++++D M +RG P + YNSL++ + D A+ L+ ++ EGLKPD V
Sbjct: 306 KVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSV 365
Query: 153 TWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGL 196
T+ +++ C+ GK A+ + TM P + T L+ +
Sbjct: 366 TYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAV 409
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 95/207 (45%), Gaps = 4/207 (1%)
Query: 7 IQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGAR 66
I P SY+ +I K G + L EM ++G+ P ++ ++ LV +E A
Sbjct: 290 ITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAM 349
Query: 67 CVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGW 126
+M + G++P+ VTYNS+I C +++ A V M+ P+V T+ H +
Sbjct: 350 KLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTF----HAF 405
Query: 127 CKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNL 186
+ + ++ + +LG+M L P T+ ++G + +P A +++ M V N
Sbjct: 406 LEAVNFEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANP 465
Query: 187 QTCTVILDGLFKCRFHSEAMSLFRAME 213
+ GL C + +A ++ M+
Sbjct: 466 ALYLATIQGLLSCGWLEKAREIYSEMK 492
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 113/298 (37%), Gaps = 42/298 (14%)
Query: 51 ILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRR 110
+++D + S A M P + L+ C RH E + F L ++
Sbjct: 194 LMMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALC-RHGHIEKAEEFMLASKK 252
Query: 111 GCLPSVVTYNSLIHGWCKV-KDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLA 169
V +N +++GWC + DV A + EM N + P+ +++ ++ F +VG
Sbjct: 253 LFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFD 312
Query: 170 AKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLD 229
+ L+ MK+ G P ++ ++ L + EAM L + + + + D V
Sbjct: 313 SLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSV------- 365
Query: 230 GMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPP 289
T+N MIR LC G LD A +L M P
Sbjct: 366 ----------------------------TYNSMIRPLCEAGKLDVARNVLATMISENLSP 397
Query: 290 NRCSYNVFVHGLLRKLDISRSEKYLQIMKCKGF-PVDANTTELLICIYSANKGDNAFQ 346
++ H L ++ ++ + L MK P + +L ++ + +NA +
Sbjct: 398 TVDTF----HAFLEAVNFEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALK 451
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 83/183 (45%), Gaps = 8/183 (4%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G+ P I YN L+ L + + E L+ ++ ++G+ PD T++ ++ + G +
Sbjct: 323 RGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDV 382
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQME--EAMKVFDLMVRRGCLPSVVTYNSL 122
AR V+ M+ + P V T+++ + +E MK+ DL P+ T+ +
Sbjct: 383 ARNVLATMISENLSPTVDTFHAFLEAVNFEKTLEVLGQMKISDLG------PTEETFLLI 436
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
+ K K + A+ + EM + + + A + G G A+E++ MK G
Sbjct: 437 LGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSKGF 496
Query: 183 VPN 185
V N
Sbjct: 497 VGN 499
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 10/160 (6%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G+ P SYN L+Q L +M+++ V+PDV ++ IL+ GF ++G V+GA
Sbjct: 185 GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGA 244
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
++ M++ G P+ +LIGG C + +E K + M+ +G P N L+ G
Sbjct: 245 MELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKG 300
Query: 126 WCKVKDVDRAICLLGEMV---NEGLKPDVVTWTALVGGFC 162
+C V+ A C + E+V E L D TW ++ C
Sbjct: 301 FCSFGKVEEA-CDVVEVVMKNGETLHSD--TWEMVIPLIC 337
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 5/169 (2%)
Query: 41 GVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEA 100
GVMP+ +++++L+ F +S A + G M+ V P+V +Y LI G+C + Q+ A
Sbjct: 185 GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGA 244
Query: 101 MKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGG 160
M++ D M+ +G +P +LI G C D L EM+++G P LV G
Sbjct: 245 MELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKG 300
Query: 161 FCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLF 209
FC GK A ++ + ++G+ + T +++ L SE + LF
Sbjct: 301 FCSFGKVEEACDVVEVVMKNGETLHSDTWEMVI-PLICNEDESEKIKLF 348
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 68/147 (46%), Gaps = 4/147 (2%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+ + P + SY LIQG + G+ LL +M+ KG +PD L+ G +G+
Sbjct: 219 RDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDE 274
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
+ + M+ G P+ N L+ G+C ++EEA V +++++ G T+ +I
Sbjct: 275 GKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIP 334
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDV 151
C + ++ L + V E + D
Sbjct: 335 LICNEDESEKIKLFLEDAVKEEITGDT 361
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%)
Query: 94 RHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVT 153
R +++A ++F G +P+ +YN L+ +C D+ A L G+M+ + PDV +
Sbjct: 168 RGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDS 227
Query: 154 WTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+ L+ GFC+ G+ A EL M G VP+
Sbjct: 228 YKILIQGFCRKGQVNGAMELLDDMLNKGFVPD 259
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 9/208 (4%)
Query: 8 QPTIVSYNCLIQGLFKFGRWKEGAGL-LYEMMQKGVM-PDVQTFSILVDGFGKEGLVSGA 65
+ +VS+ +I G + W+ L LY M+K P+ TF+ L+ G +
Sbjct: 183 ERNVVSWTAMISGFAQ--EWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQG 240
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
R V +H+G++ + NSLI YC +++A ++FD + VV++NS+I G
Sbjct: 241 RSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNK----DVVSWNSMIAG 296
Query: 126 WCKVKDVDRAICLLGEMV-NEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
+ + +AI L M+ G KPD +T+ ++ G ++ F M EHG P
Sbjct: 297 YAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKP 356
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAM 212
L + ++D L + EA+ L M
Sbjct: 357 ELNHYSCLVDLLGRFGLLQEALELIENM 384
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 116/278 (41%), Gaps = 16/278 (5%)
Query: 12 VSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGF 71
V +N L+ G + R+++ + +M ++GV T + ++ F G + R + G
Sbjct: 228 VLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGL 287
Query: 72 MVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL--IHGWCKV 129
V G ++V N+LI Y +EEA +F+ M R + T+NS+ +H +C
Sbjct: 288 AVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDER----DLFTWNSVLCVHDYC-- 341
Query: 130 KDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHG----QVPN 185
D D + L M+ G++PD+VT T ++ ++ +E+ M G + N
Sbjct: 342 GDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSN 401
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXX 245
++D KC +A +F +M D +N+M++G
Sbjct: 402 EFIHNSLMDMYVKCGDLRDARMVFDSMRVK----DSASWNIMINGYGVQSCGELALDMFS 457
Query: 246 XXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRME 283
D TF +++ G L+E L +ME
Sbjct: 458 CMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQME 495
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 4/212 (1%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G + + YN LI G G + EM G++PD TF L+ G L S
Sbjct: 121 GSERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMEL-SDV 179
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
+ V G +G + + + L+ Y +E+A KVFD + R V +N+L++G
Sbjct: 180 KKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDR---DDSVLWNALVNG 236
Query: 126 WCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPN 185
+ ++ + A+ + +M EG+ T T+++ F G + + + G +
Sbjct: 237 YSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSD 296
Query: 186 LQTCTVILDGLFKCRFHSEAMSLFRAMEKSDI 217
+ ++D K ++ EA S+F AM++ D+
Sbjct: 297 IVVSNALIDMYGKSKWLEEANSIFEAMDERDL 328
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 94/219 (42%), Gaps = 7/219 (3%)
Query: 85 NSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVN 144
++LI Y + AMK+F+ M + G +VV++N+L+ +R L E
Sbjct: 106 STLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQ 165
Query: 145 E--GLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFH 202
+ PD +++ L+ +C GKP A E+ M+ G + T IL L+K
Sbjct: 166 RYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLV 225
Query: 203 SEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIM 262
EA SL+ M DLD VYNV L DT ++N +
Sbjct: 226 DEAESLWIEMVNKGCDLDNTVYNVRLMNAAKESPERVKELMEEMSSVGLKP-DTVSYNYL 284
Query: 263 IRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGL 301
+ C +G++ EA+++ +E+ PN ++ + L
Sbjct: 285 MTAYCVKGMMSEAKKVYEGLEQ----PNAATFRTLIFHL 319
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 96/210 (45%), Gaps = 40/210 (19%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
KG++ TI+++ ++ L+K G E L EM+ KG D +++ + KE
Sbjct: 203 KGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYNVRLMNAAKES-PER 261
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
+ +M M VG++P+ V+YN L+ YC++ M EA KV++ + + P+ T+ +LI
Sbjct: 262 VKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGLEQ----PNAATFRTLIF 317
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVP 184
C + + ++GL V +A+V ++P
Sbjct: 318 HLC-----------INGLYDQGL--TVFKKSAIV----------------------HKIP 342
Query: 185 NLQTCTVILDGLFKCRFHSEAMSLFRAMEK 214
+ +TC + +GL K +A + R ++K
Sbjct: 343 DFKTCKHLTEGLVKNNRMEDARGVARIVKK 372
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 23 KFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVV 82
KFG+ EM + + +++ L+ G+ + G + A + M HV +VV
Sbjct: 125 KFGKMGCARNAFDEMPHRSEV----SWTALISGYIRCGELDLASKLFDQMPHV---KDVV 177
Query: 83 TYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEM 142
YN+++ G+ M A ++FD M + +V+T+ ++IHG+C +KD+D A L M
Sbjct: 178 IYNAMMDGFVKSGDMTSARRLFDEMTHK----TVITWTTMIHGYCNIKDIDAARKLFDAM 233
Query: 143 VNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMK 178
L V+W ++GG+CQ +P LF M+
Sbjct: 234 PERNL----VSWNTMIGGYCQNKQPQEGIRLFQEMQ 265
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 103/251 (41%), Gaps = 41/251 (16%)
Query: 11 IVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMG 70
+V YN ++ G K G L EM K V+ T++ ++ G+ + AR +
Sbjct: 176 VVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVI----TWTTMIHGYCNIKDIDAARKLFD 231
Query: 71 FMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVF-----------DLMVRRGCLPSVVTY 119
M E N+V++N++IGGYC Q +E +++F D + LP++
Sbjct: 232 AMP----ERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDT 287
Query: 120 NSLIHG-WC----KVKDVDRAICL----------------LGEMVNEGLKPDVVTWTALV 158
+L G WC + K +D+ + + + +E + V +W A++
Sbjct: 288 GALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMI 347
Query: 159 GGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDID 218
G+ G AA +LF TM + P+ T ++ E F M + ++
Sbjct: 348 HGYALNGNARAALDLFVTMMIE-EKPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLN 406
Query: 219 LDIVVYNVMLD 229
I Y M+D
Sbjct: 407 AKIEHYGCMVD 417
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 90/206 (43%), Gaps = 6/206 (2%)
Query: 8 QPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVM-PDVQTFSILVDGFGKEGLVSGAR 66
+ +VS+N +I G + + +EG L EM + PD T ++ G +S
Sbjct: 235 ERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGE 294
Query: 67 CVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGW 126
F+ ++ V +++ Y ++E+A ++FD M + V ++N++IHG+
Sbjct: 295 WCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEK----QVASWNAMIHGY 350
Query: 127 CKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNL 186
+ A+ L M+ E KPD +T A++ G ++ F M+E G +
Sbjct: 351 ALNGNARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKI 409
Query: 187 QTCTVILDGLFKCRFHSEAMSLFRAM 212
+ ++D L + EA L M
Sbjct: 410 EHYGCMVDLLGRAGSLKEAEDLITNM 435
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 93/196 (47%), Gaps = 4/196 (2%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWK-EGAGLLYEMMQK-GVMPDVQTFSILVDGFGKEGLV 62
KG++ IV++ +I K RW E L+ ++M+K VM D+ ++ +L+DGF G V
Sbjct: 240 KGVKANIVTFKSMIGCCVK--RWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKV 297
Query: 63 SGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSL 122
A ++ M + YN ++ GY +E+ ++++ M RG P+ TY L
Sbjct: 298 EEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVL 357
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
++G CK V A+ L E+ + D ++ L +VG + E+ M G
Sbjct: 358 MNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGF 417
Query: 183 VPNLQTCTVILDGLFK 198
+P C + D LF+
Sbjct: 418 IPGATICERLADSLFE 433
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 95/193 (49%), Gaps = 2/193 (1%)
Query: 37 MMQKGV-MPDVQTFSILVDGFGKEGLVSGARCVMGFMVHV-GVEPNVVTYNSLIGGYCLR 94
M++ G+ + V + +++V G ++ AR ++ M V GV+ N+VT+ S+IG R
Sbjct: 200 MVESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKR 259
Query: 95 HQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTW 154
EE V LM + + + +Y LI G+ V+ A L+ M ++ L+ + +
Sbjct: 260 WDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLY 319
Query: 155 TALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEK 214
++ G+ + G EL+ M G PN T V+++GL K EAMS +
Sbjct: 320 NLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRV 379
Query: 215 SDIDLDIVVYNVM 227
++ ++D +Y+ +
Sbjct: 380 NEFEIDEEMYSTL 392
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 109/259 (42%), Gaps = 14/259 (5%)
Query: 76 GVEPNVV--TYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVD 133
G E VV +NS+I Y + E ++VF+ M T + + ++
Sbjct: 132 GCEKKVVGRFFNSMIMVYSDNGKFSEVVEVFEYMKNNEVKIDEKTCTLHLLNLKRCDQME 191
Query: 134 RAICLLGEMVNEGLKPDVVT---WTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCT 190
A MV G+ DVVT T +V C G+ A+EL ++E G V ++
Sbjct: 192 LARDFFSLMVESGI--DVVTVYSLTVVVTVLCCNGEITRAREL---VEEMGLVKGVKANI 246
Query: 191 VILDGLFKC---RFHSEAMSL-FRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXX 246
V + C R+ E + L + MEK + LD+ Y V++DG
Sbjct: 247 VTFKSMIGCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLM 306
Query: 247 XXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLD 306
++Y +N+++ G GL+++ EL M G PN+ +Y V ++GL +
Sbjct: 307 MHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGK 366
Query: 307 ISRSEKYLQIMKCKGFPVD 325
+ + +L ++ F +D
Sbjct: 367 VCEAMSFLNELRVNEFEID 385
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 9/193 (4%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
K ++ +VS+ +I FK RW+EG L E++ P+ TF+ +++
Sbjct: 278 KIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEEL 337
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGC-LPSVVTYNSLI 123
+ V G+M VG +P +SL+ Y +E A V D GC P +V++ SLI
Sbjct: 338 GKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVD-----GCPKPDLVSWTSLI 392
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQV 183
G + D A+ ++ G KPD VT+ ++ G E F+++ E ++
Sbjct: 393 GGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRL 452
Query: 184 PNLQ---TCTVIL 193
+ TC V L
Sbjct: 453 SHTSDHYTCLVDL 465
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 101/210 (48%), Gaps = 13/210 (6%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
+ G P IV +N L++ K G + + EM + D+ +++++V+G+ + GL+
Sbjct: 113 TSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNR----DLCSWNVMVNGYAEVGLLE 168
Query: 64 GARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVR-RGCLPSVVTYNSL 122
AR + M E + ++ +++ GY + Q EEA+ ++ LM R P++ T +
Sbjct: 169 EARKLFDEM----TEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIA 224
Query: 123 IHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQ 182
+ VK + R + G +V GL D V W++L+ + + G A+ +F + E
Sbjct: 225 VAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDV 284
Query: 183 VPNLQTCTVILDGLFKCRFHSEAMSLFRAM 212
V + T ++D FK E SLF +
Sbjct: 285 V----SWTSMIDRYFKSSRWREGFSLFSEL 310
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 8/137 (5%)
Query: 78 EPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAIC 137
+P TY +LI +EE KV + + G +P +V +N L+ + K + A
Sbjct: 82 KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARK 141
Query: 138 LLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLF 197
+ EM N D+ +W +V G+ +VG A++LF M E + + T ++ G
Sbjct: 142 VFDEMPNR----DLCSWNVMVNGYAEVGLLEEARKLFDEMTE----KDSYSWTAMVTGYV 193
Query: 198 KCRFHSEAMSLFRAMEK 214
K EA+ L+ M++
Sbjct: 194 KKDQPEEALVLYSLMQR 210
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 83/189 (43%), Gaps = 7/189 (3%)
Query: 13 SYNCLIQGLFKFGRWKEGAGLLYEMMQK--GVMPDVQTFSILVDGFGKEGLVSGARCVMG 70
S+ ++ G K + E A +LY +MQ+ P++ T SI V + + + G
Sbjct: 184 SWTAMVTGYVKKDQ-PEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHG 242
Query: 71 FMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVK 130
+V G++ + V ++SL+ Y ++EA +FD +V + VV++ S+I + K
Sbjct: 243 HIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEK----DVVSWTSMIDRYFKSS 298
Query: 131 DVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCT 190
L E+V +P+ T+ ++ + K++ M G P +
Sbjct: 299 RWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASS 358
Query: 191 VILDGLFKC 199
++D KC
Sbjct: 359 SLVDMYTKC 367
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 87/176 (49%), Gaps = 9/176 (5%)
Query: 11 IVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMG 70
+VS+N ++ G + GR+++ L +M ++ + DV T+S + G+ + GL A V
Sbjct: 295 VVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCR 354
Query: 71 FMVHVGVEPNVVTYNSLIGGY----CLRHQME---EAMKVFDLMVRRGCLPSVVTYNSLI 123
M+ G++PN VT S++ G L H E A+K + + G + N LI
Sbjct: 355 QMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLI 414
Query: 124 HGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKE 179
+ K K VD A + + + + DVVTWT ++GG+ Q G A EL M E
Sbjct: 415 DMYAKCKKVDTARAMFDSLSPK--ERDVVTWTVMIGGYSQHGDANKALELLSEMFE 468
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 119/294 (40%), Gaps = 14/294 (4%)
Query: 11 IVSYNCLIQGLFKFGRWKEGAGLLYEMMQK-GVMPDVQTFSILVDGFGKEGLVSGARCVM 69
+VS+N +I+ K G+ K + M + G PD T ++ G S + +
Sbjct: 193 VVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLH 252
Query: 70 GFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKV 129
F V + N+ N L+ Y M+EA VF M + VV++N+++ G+ ++
Sbjct: 253 CFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNM----SVKDVVSWNAMVAGYSQI 308
Query: 130 KDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTC 189
+ A+ L +M E +K DVVTW+A + G+ Q G A + M G PN T
Sbjct: 309 GRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTL 368
Query: 190 TVILDG-------LFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXX 242
+L G + H A+ + K+ + +V N ++D
Sbjct: 369 ISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARA 428
Query: 243 XXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNV 296
D T+ +MI G G ++A ELL M E C ++ +
Sbjct: 429 MFDSLSPKER--DVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTI 480
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 96/251 (38%), Gaps = 9/251 (3%)
Query: 44 PDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKV 103
PD TF + G+ V + G NV N+L+ Y + +A KV
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 104 FDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNE-GLKPDVVTWTALVGGFC 162
FD M + VV++NS+I + K+ A+ + M NE G +PD +T ++
Sbjct: 185 FDEM----SVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCA 240
Query: 163 QVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIV 222
+G K+L + N+ ++D KC EA ++F M D+V
Sbjct: 241 SLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK----DVV 296
Query: 223 VYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRM 282
+N M+ G D T++ I G GL EA + +M
Sbjct: 297 SWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQM 356
Query: 283 EENGCPPNRCS 293
+G PN +
Sbjct: 357 LSSGIKPNEVT 367
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 116/283 (40%), Gaps = 36/283 (12%)
Query: 13 SYNCLIQGLFKFGRWKEGAGLLYEMMQ-KGVMPDVQTFSILVDGFGKEGLVSGARCVMGF 71
+YN I+ L K G A L ++ +G +V ++ +V KE + G ++
Sbjct: 323 AYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTE 382
Query: 72 MVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKD 131
M+ GV PN T N+ + +C ++EA++++ G P+ ++YN LIH C +
Sbjct: 383 MMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANES 442
Query: 132 VDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTV 191
V++A +L ++ G T++ L C GKP A+EL E +P
Sbjct: 443 VEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCK 502
Query: 192 ILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXX 251
I+ L +A+ + KS +D ++ ++ G
Sbjct: 503 IISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSI------------------- 543
Query: 252 XXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSY 294
++RG D A +L++RM+E G P R Y
Sbjct: 544 ---------TLMRG-------DIAAKLIIRMQEKGYTPTRSLY 570
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/350 (20%), Positives = 131/350 (37%), Gaps = 7/350 (2%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSG 64
+G + + YN ++ L K +L EMM +GV P+ +T + + F K G V
Sbjct: 351 EGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDE 410
Query: 65 ARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIH 124
A + +G P ++YN LI C +E+A V + RG T+++L +
Sbjct: 411 ALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTN 470
Query: 125 GWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGK---PLAAKELFFTMKEHG 181
C D A L+ L P + ++ C VGK L ELF + G
Sbjct: 471 ALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELF---NKSG 527
Query: 182 QVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXX 241
+ + T ++ G A L M++ +Y ++ +C
Sbjct: 528 VDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNF 587
Query: 242 XXXXXXXXXXX-XFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHG 300
+N+ I G + G A + M+ +G P S + +
Sbjct: 588 FTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQS 647
Query: 301 LLRKLDISRSEKYLQIMKCKGFPVDANTTELLICIYSANKGDNAFQELQQ 350
L+ I+ + + ++ +G +++ + ANK D+A L++
Sbjct: 648 YLKNEKIADALHFFHDLREQGKTKKRLYQVMIVGLCKANKLDDAMHFLEE 697
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/324 (20%), Positives = 114/324 (35%), Gaps = 40/324 (12%)
Query: 3 NSKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMP------------------ 44
N G+ + + LI G R A L+ M +KG P
Sbjct: 524 NKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESG 583
Query: 45 ------------------DVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNS 86
VQ +++ ++G G G AR V M G+ P V +
Sbjct: 584 EKNFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNIL 643
Query: 87 LIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEG 146
++ Y ++ +A+ F + +G + Y +I G CK +D A+ L EM EG
Sbjct: 644 MLQSYLKNEKIADALHFFHDLREQGKTKKRL-YQVMIVGLCKANKLDDAMHFLEEMKGEG 702
Query: 147 LKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAM 206
L+P + + + C K A L ++ G+ V+L K + EA
Sbjct: 703 LQPSIECYEVNIQKLCNEEKYDEAVGLVNEFRKSGRRITAFIGNVLLHNAMKSKGVYEAW 762
Query: 207 SLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGL 266
+ R +E D ++ ++ D YT+N+++R +
Sbjct: 763 TRMRNIE--DKIPEMKSLGELIGLFSGRIDMEVELKRLDEVIEKCYPLDMYTYNMLLRMI 820
Query: 267 CWEGLLDEAEELLMRMEENGCPPN 290
D A E++ R+ G PN
Sbjct: 821 VMNQAED-AYEMVERIARRGYVPN 843
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 92/247 (37%), Gaps = 1/247 (0%)
Query: 48 TFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLM 107
T SILV F K+G + A + ++ L+ C + + +EA K+ D +
Sbjct: 253 THSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEI 312
Query: 108 VRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVN-EGLKPDVVTWTALVGGFCQVGK 166
G + YN I K ++ L ++ EG + +V + ++V +
Sbjct: 313 KLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENN 372
Query: 167 PLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNV 226
++ M G PN +T L K F EA+ L+R+ + + YN
Sbjct: 373 LDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNY 432
Query: 227 MLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENG 286
++ +C TF+ + LCW+G D A EL++ E
Sbjct: 433 LIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERD 492
Query: 287 CPPNRCS 293
P R +
Sbjct: 493 LLPKRIA 499
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 97/205 (47%), Gaps = 46/205 (22%)
Query: 14 YNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMV 73
+N +I G +K+G KE A L++MM + DV ++++++ GF K + AR M
Sbjct: 170 WNVMISGYWKWGN-KEEACKLFDMMPEN---DVVSWTVMITGFAKVKDLENARKYFDRMP 225
Query: 74 HVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTY-------------- 119
E +VV++N+++ GY E+A+++F+ M+R G P+ T+
Sbjct: 226 ----EKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPS 281
Query: 120 ---------------------NSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALV 158
+L+ K +D+ A + E+ G + ++VTW A++
Sbjct: 282 LTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNEL---GTQRNLVTWNAMI 338
Query: 159 GGFCQVGKPLAAKELFFTMKEHGQV 183
G+ ++G +A++LF TM + V
Sbjct: 339 SGYTRIGDMSSARQLFDTMPKRNVV 363
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 118/299 (39%), Gaps = 52/299 (17%)
Query: 34 LYEMMQK-GVMPDVQTFSILVDGFGKEGLVSGA--------------RCVMGFMV-HVGV 77
LYE + G+MPD +F +++ G+ G++ A +M V H V
Sbjct: 93 LYEQRSRCGIMPDAFSFPVVIKSAGRFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESV 152
Query: 78 EPNVVTY-----------NSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGW 126
E + N +I GY EEA K+FD+M VV++ +I G+
Sbjct: 153 ESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPEN----DVVSWTVMITGF 208
Query: 127 CKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNL 186
KVKD++ A M + VV+W A++ G+ Q G A LF M G PN
Sbjct: 209 AKVKDLENARKYFDRMPEKS----VVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNE 264
Query: 187 QTCTVILDGLFKCRFHSE---AMSLFRAMEKSDIDLDIVVYNVMLD--GMCXXXXXXXXX 241
T +++ C F ++ SL + +++ + L+ V +LD C
Sbjct: 265 TTWVIVISA---CSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRI 321
Query: 242 XXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHG 300
+ T+N MI G G + A +L M + N S+N + G
Sbjct: 322 FNELGTQR-----NLVTWNAMISGYTRIGDMSSARQLFDTMPKR----NVVSWNSLIAG 371
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 86/174 (49%), Gaps = 7/174 (4%)
Query: 8 QPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARC 67
+ ++VS+N ++ G + G ++ L +M++ GV P+ T+ I++ S R
Sbjct: 226 EKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRS 285
Query: 68 VMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWC 127
++ + V N +L+ + ++ A ++F+ + G ++VT+N++I G+
Sbjct: 286 LVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNEL---GTQRNLVTWNAMISGYT 342
Query: 128 KVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHG 181
++ D+ A L M K +VV+W +L+ G+ G+ A E F M ++G
Sbjct: 343 RIGDMSSARQLFDTMP----KRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYG 392
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 79/170 (46%), Gaps = 5/170 (2%)
Query: 10 TIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKG-VMPDVQTFSILVDGFGKEGLVSGARCV 68
+VS+N LI G G+ +M+ G PD T ++ G + C+
Sbjct: 361 NVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCI 420
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
+ ++ ++ N Y SLI Y + EA +VFD M R VV+YN+L +
Sbjct: 421 VDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER----DVVSYNTLFTAFAA 476
Query: 129 VKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMK 178
D + LL +M +EG++PD VT+T+++ + G + +F +++
Sbjct: 477 NGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIR 526
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 97/223 (43%), Gaps = 8/223 (3%)
Query: 10 TIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVM 69
++V++ L G GR +E L +M++ GV PD ++ G + ++
Sbjct: 176 SVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIV 235
Query: 70 GFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKV 129
+M + ++ N +L+ Y +ME+A VFD MV + +VT++++I G+
Sbjct: 236 KYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEK----DIVTWSTMIQGYASN 291
Query: 130 KDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTC 189
I L +M+ E LKPD + + +G + + H + NL
Sbjct: 292 SFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMA 351
Query: 190 TVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMC 232
++D KC + +F+ M++ DIV+ N + G+
Sbjct: 352 NALIDMYAKCGAMARGFEVFKEMKEK----DIVIMNAAISGLA 390
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 8/222 (3%)
Query: 9 PTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCV 68
P I YN LI G + E L + + G+ TF +++ + +
Sbjct: 74 PNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDL 133
Query: 69 MGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCK 128
+V G +V SL+ Y ++ +A K+FD + R SVVT+ +L G+
Sbjct: 134 HSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDR----SVVTWTALFSGYTT 189
Query: 129 VKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQT 188
AI L +MV G+KPD ++ VG + + + M+E N
Sbjct: 190 SGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFV 249
Query: 189 CTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDG 230
T +++ KC +A S+F +M ++ DIV ++ M+ G
Sbjct: 250 RTTLVNLYAKCGKMEKARSVFDSM----VEKDIVTWSTMIQG 287
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 137/347 (39%), Gaps = 52/347 (14%)
Query: 8 QPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKG-VMPDVQTFSI--------------- 51
+ ++++ +I G FK G +++G GL M Q+G V + T ++
Sbjct: 236 ERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGS 295
Query: 52 --------------------LVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGY 91
L+ + K G + A+ V G M + + V++NSLI G
Sbjct: 296 QIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKN----KDSVSWNSLITGL 351
Query: 92 CLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDV 151
R Q+ EA ++F+ M + +V++ +I G+ ++ + + L G M + D
Sbjct: 352 VQRKQISEAYELFEKMPGK----DMVSWTDMIKGFSGKGEISKCVELFGMMPEK----DN 403
Query: 152 VTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRA 211
+TWTA++ F G A F M + PN T + +L E + +
Sbjct: 404 ITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGR 463
Query: 212 MEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGL 271
+ K +I D+ V N ++ C + ++N MI G + G
Sbjct: 464 VVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEP----NIVSYNTMISGYSYNGF 519
Query: 272 LDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIMK 318
+A +L +E +G PN ++ + + + KY + MK
Sbjct: 520 GKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMK 566
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 106/244 (43%), Gaps = 15/244 (6%)
Query: 78 EPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAIC 137
E N V+Y ++I G+ + +EA ++ + V N L+ G+ + + A+
Sbjct: 141 EKNAVSYATMITGFVRAGRFDEAEFLYAETPVK--FRDSVASNVLLSGYLRAGKWNEAVR 198
Query: 138 LLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLF 197
+ M + +VV+ +++V G+C++G+ + A+ LF M E N+ T T ++DG F
Sbjct: 199 VFQGMAVK----EVVSCSSMVHGYCKMGRIVDARSLFDRMTER----NVITWTAMIDGYF 250
Query: 198 KCRFHSEAMSLF-RAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDT 256
K F + LF R ++ D+ ++ VM FD
Sbjct: 251 KAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDL 310
Query: 257 YTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQI 316
+ N ++ G + EA+ + M+ + S+N + GL+++ IS + + +
Sbjct: 311 FLGNSLMSMYSKLGYMGEAKAVFGVMKNK----DSVSWNSLITGLVQRKQISEAYELFEK 366
Query: 317 MKCK 320
M K
Sbjct: 367 MPGK 370
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 94/231 (40%), Gaps = 31/231 (13%)
Query: 12 VSYNCLIQGLFKFGRWKEGAGLLYEMMQK-------------------------GVMP-- 44
VS+N LI GL + + E L +M K G+MP
Sbjct: 342 VSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEK 401
Query: 45 DVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVF 104
D T++ ++ F G A C M+ V PN T++S++ + E +++
Sbjct: 402 DNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIH 461
Query: 105 DLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQV 164
+V+ + + NSL+ +CK + + A + + +P++V++ ++ G+
Sbjct: 462 GRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCIS----EPNIVSYNTMISGYSYN 517
Query: 165 GKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKS 215
G A +LF ++ G+ PN T +L + F++M+ S
Sbjct: 518 GFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSS 568
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 84/185 (45%)
Query: 12 VSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGF 71
V+Y I + ++ + L EM++KG V +S ++D +GK +S A +M
Sbjct: 389 VTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAK 448
Query: 72 MVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKD 131
M G +PN+ YNSLI + + A K++ M R LP V+Y S+I + + K+
Sbjct: 449 MKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKE 508
Query: 132 VDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTV 191
++R + L E K D +VG F + + L MK G + + +
Sbjct: 509 LERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGTRLDARLYSS 568
Query: 192 ILDGL 196
L+ L
Sbjct: 569 ALNAL 573
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 107/259 (41%), Gaps = 49/259 (18%)
Query: 14 YNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGF----------------- 56
Y + L K GR E +L EM KG+ + +S+L+ F
Sbjct: 251 YTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAG 310
Query: 57 GKEGLVSGARCVMGFMVHVGVEPNVVTYN-------------------SLIGGYCLRHQM 97
GK+ L C+ +++V E N+ T +++ G+ +
Sbjct: 311 GKKLLKDPEMCLKVVLMYVR-EGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGF 369
Query: 98 EEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTAL 157
EA+KV++ ++ C VTY I+ +C+++ ++A L EMV +G VV ++ +
Sbjct: 370 AEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNI 429
Query: 158 VGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRA------ 211
+ + + + A L MK+ G PN+ ++D H AM L RA
Sbjct: 430 MDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLID------MHGRAMDLRRAEKIWKE 483
Query: 212 MEKSDIDLDIVVYNVMLDG 230
M+++ + D V Y M+
Sbjct: 484 MKRAKVLPDKVSYTSMISA 502
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 84/177 (47%)
Query: 52 LVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRG 111
+V+GF K+ + A V + + E VTY I YC + +A +FD MV++G
Sbjct: 359 IVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKG 418
Query: 112 CLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAK 171
VV Y++++ + K + + A+ L+ +M G KP++ + +L+ + A+
Sbjct: 419 FDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAE 478
Query: 172 ELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVML 228
+++ MK +P+ + T ++ + + + L++ + +D + +M+
Sbjct: 479 KIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMV 535
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 95/202 (47%), Gaps = 5/202 (2%)
Query: 12 VSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGF 71
VS+ C+I G K GR E + M+ + V PD T ++ G + + +
Sbjct: 216 VSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSY 275
Query: 72 MVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKD 131
+ H G+ V N++I Y + +A+ VF+ + R +VVT+ ++I G
Sbjct: 276 VDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNER----NVVTWTTIIAGLATHGH 331
Query: 132 VDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMK-EHGQVPNLQTCT 190
A+ + MV G++P+ VT+ A++ VG K LF +M+ ++G PN++
Sbjct: 332 GAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYG 391
Query: 191 VILDGLFKCRFHSEAMSLFRAM 212
++D L + EA + ++M
Sbjct: 392 CMIDLLGRAGKLREADEVIKSM 413
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 103/264 (39%), Gaps = 54/264 (20%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G ++ LIQ F G G G +M + ++ DV ++ L+ G+GK G + A
Sbjct: 146 GFDSSVHVVTGLIQMYFSCG----GLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEA 201
Query: 66 RCVMGFMVHVGVEP----NVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTY-- 119
R ++ M P N V++ +I GY + EA++VF M+ P VT
Sbjct: 202 RSLLEMM------PCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLA 255
Query: 120 ---------------------------------NSLIHGWCKVKDVDRAICLLGEMVNEG 146
N++I + K ++ +A+ + E VNE
Sbjct: 256 VLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVF-ECVNE- 313
Query: 147 LKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAM 206
+VVTWT ++ G G A +F M + G PN T IL +
Sbjct: 314 --RNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGK 371
Query: 207 SLFRAME-KSDIDLDIVVYNVMLD 229
LF +M K I +I Y M+D
Sbjct: 372 RLFNSMRSKYGIHPNIEHYGCMID 395
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:4962293-4965976 FORWARD LENGTH=1227
Length = 1227
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 107/232 (46%), Gaps = 9/232 (3%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGV---MPDVQTFSILVDGFGKEG 60
SKG++P S + L G K+ L M KG VQT +V+ +G
Sbjct: 972 SKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQT--KIVETLISKG 1029
Query: 61 LVSGARCVMGFMVHVGV-EPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTY 119
+ A + + G+ PN Y+++I R ++ A+ + + M++ +P +Y
Sbjct: 1030 EIPKAEDFLTRVTRNGMMAPN---YDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSY 1086
Query: 120 NSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKE 179
+S+I+G + +D+A+ EMV GL P + TW+ LV FC+ + L ++ L +M
Sbjct: 1087 DSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVG 1146
Query: 180 HGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGM 231
G+ P+ + ++D + +A + M+K ++D + ++ M
Sbjct: 1147 LGESPSQEMFKTVIDRFRVEKNTVKASEMMEMMQKCGYEVDFETHWSLISNM 1198
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 72/146 (49%), Gaps = 2/146 (1%)
Query: 68 VMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWC 127
++ F+ V EP+V N ++ C R E A + + G VT+ LI GWC
Sbjct: 310 LLSFIGEVKYEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILI-GWC 368
Query: 128 KVK-DVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNL 186
+ D+ RA+ L E++++G KPDV ++ A++ G + G + MKE+G + +L
Sbjct: 369 CYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSL 428
Query: 187 QTCTVILDGLFKCRFHSEAMSLFRAM 212
T +++ G K R EA + M
Sbjct: 429 STFKIMVTGYCKARQFEEAKRIVNKM 454
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 81/192 (42%), Gaps = 36/192 (18%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
SKG +P + SYN ++ GLF+ G W+ +L EM + G+M + TF I+V G+ K
Sbjct: 386 SKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCKARQFE 445
Query: 64 GARCVMGFMVH-------------------VGVEPNVVT--------------YNSLIGG 90
A+ ++ M VG +P V ++ L G
Sbjct: 446 EAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVRLKRDNDSTFSKAEFFDDLGNG 505
Query: 91 YCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPD 150
L ++ + ++++ R LP +NSLI + D+ A+ LL EM G K
Sbjct: 506 LYLHTDLDAYEQRVNMVLDRSVLPE---FNSLIVRASEDGDLQTALRLLDEMARWGQKLS 562
Query: 151 VVTWTALVGGFC 162
++ L+ C
Sbjct: 563 RRSFAVLMRSLC 574
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 135/337 (40%), Gaps = 46/337 (13%)
Query: 4 SKGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVS 63
S G+ YN + QG K W + +L M++K ++ V+++ V E
Sbjct: 831 SNGLSSYNKIYNVMFQGYCKGNNWMKVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSL 890
Query: 64 GARCVMGFMVHVGVEPN-VVTYNSLIGGYCLRHQME-EAMKVFDLMVRRGCLPSVVTYNS 121
A + F++ P V+ YN LI Y R + E KV M RG LP T+N
Sbjct: 891 SAISLKEFLLLGESNPGGVIIYNMLIF-YMFRAKNHLEVNKVLLEMQGRGVLPDETTFNF 949
Query: 122 LIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHG 181
L+HG+ D ++ L M+++G+KP+ + A+ C G A +L+ M+ G
Sbjct: 950 LVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKG 1009
Query: 182 QVPNLQTCTV---ILDGL-----------FKCRFHSEAMS-------LFRAMEKSDIDLD 220
NL + V I++ L F R M + + ++ ++D+
Sbjct: 1010 W--NLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNGMMAPNYDNIIKKLSDRGNLDIA 1067
Query: 221 IVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDEAEELLM 280
+ + N ML + +++ +I GL LD+A +
Sbjct: 1068 VHLLNTMLKNQSIP--------------------GSSSYDSVINGLLRYNQLDKAMDFHT 1107
Query: 281 RMEENGCPPNRCSYNVFVHGLLRKLDISRSEKYLQIM 317
M E G P+ +++ VH + SE+ ++ M
Sbjct: 1108 EMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSM 1144
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 93/235 (39%), Gaps = 14/235 (5%)
Query: 5 KGIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGK------ 58
KG+ P Y LI L + R + Y + V + + +D GK
Sbjct: 212 KGLVPLTSCYQILIDQLVRVHRTESA----YRICLDWVETRAELNHMNIDSIGKVIELLC 267
Query: 59 -EGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVV 117
+ V AR + +V +G N Y+ + GY + E+ + + P V
Sbjct: 268 LDQKVQEARVLARKLVALGCILNSSIYSKITIGYNEKQDFEDLLSFIGEVKYE---PDVF 324
Query: 118 TYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTM 177
N ++H C+ +RA + E+ + G K D VT+ L+G C G A +
Sbjct: 325 VGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLSEI 384
Query: 178 KEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMC 232
G P++ + IL GLF+ + M+++ + L + + +M+ G C
Sbjct: 385 MSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYC 439
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 128/326 (39%), Gaps = 14/326 (4%)
Query: 15 NCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFM-V 73
N +Q L++ RW A + Y+ + +P Q I+ +EG+V ++ M
Sbjct: 123 NIKVQALWEIFRW---ASVQYQGFKH--LP--QACEIMASMLIREGMVKEVELLLMEMER 175
Query: 74 HVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVD 133
H N + LIG Y +A+ +FD M R+G +P Y LI +V +
Sbjct: 176 HGDTMVNEGIFCDLIGKYVDDFDSRKAVMLFDWMRRKGLVPLTSCYQILIDQLVRVHRTE 235
Query: 134 RA--ICL-LGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCT 190
A ICL E E ++ + ++ C K A+ L + G + N +
Sbjct: 236 SAYRICLDWVETRAELNHMNIDSIGKVIELLCLDQKVQEARVLARKLVALGCILNSSIYS 295
Query: 191 VILDGLFKCRFHSEAMSLFRAMEKSDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXX 250
I G + + + +S ++ + D+ V N +L +C
Sbjct: 296 KITIGYNEKQDFEDLLSFIGEVK---YEPDVFVGNRILHSLCRRFGSERAYVYMEELEHL 352
Query: 251 XXXFDTYTFNIMIRGLCWEGLLDEAEELLMRMEENGCPPNRCSYNVFVHGLLRKLDISRS 310
D TF I+I C+EG + A L + G P+ SYN + GL RK +
Sbjct: 353 GFKQDEVTFGILIGWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHT 412
Query: 311 EKYLQIMKCKGFPVDANTTELLICIY 336
L MK G + +T ++++ Y
Sbjct: 413 HCILDEMKENGMMLSLSTFKIMVTGY 438
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 111/300 (37%), Gaps = 31/300 (10%)
Query: 6 GIQPTIVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGA 65
G + V++ LI G K L E+M KG PDV +++ ++ G ++GL
Sbjct: 353 GFKQDEVTFGILIGWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHT 412
Query: 66 RCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHG 125
C++ M G+ ++ T+ ++ GYC Q EEA ++ + M G + + + L
Sbjct: 413 HCILDEMKENGMMLSLSTFKIMVTGYCKARQFEEAKRIVNKMFGYGLIEASKVEDPLSEA 472
Query: 126 WCKV----------KDVDRAICL------LG-------------EMVNEGLKPDVV-TWT 155
+ V +D D LG + VN L V+ +
Sbjct: 473 FSLVGFDPLAVRLKRDNDSTFSKAEFFDDLGNGLYLHTDLDAYEQRVNMVLDRSVLPEFN 532
Query: 156 ALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSE-AMSLFRAMEK 214
+L+ + G A L M GQ + ++ V++ L R H ++SL K
Sbjct: 533 SLIVRASEDGDLQTALRLLDEMARWGQKLSRRSFAVLMRSLCASRAHLRVSISLLEKWPK 592
Query: 215 SDIDLDIVVYNVMLDGMCXXXXXXXXXXXXXXXXXXXXXFDTYTFNIMIRGLCWEGLLDE 274
LD N ++ C D T+ +IR C + L++
Sbjct: 593 LAYQLDGETLNFLVQEYCKKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLND 652
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 62/137 (45%), Gaps = 1/137 (0%)
Query: 36 EMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRH 95
E+ G D TF IL+ EG + A + ++ G +P+V +YN+++ G +
Sbjct: 348 ELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKG 407
Query: 96 QMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWT 155
+ + D M G + S+ T+ ++ G+CK + + A ++ +M GL
Sbjct: 408 LWQHTHCILDEMKENGMMLSLSTFKIMVTGYCKARQFEEAKRIVNKMFGYGLIEASKVED 467
Query: 156 ALVGGFCQVG-KPLAAK 171
L F VG PLA +
Sbjct: 468 PLSEAFSLVGFDPLAVR 484
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 106/254 (41%), Gaps = 40/254 (15%)
Query: 11 IVSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTF--------------------- 49
+VS+N +I + G EG L+YEM ++G D T
Sbjct: 384 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHA 443
Query: 50 -------------SILVDGFGKEGLVSGARCVMGFMVHVGVEPNVVTYNSLIGGYCLRHQ 96
S L+D + K GL+ ++ + F E + T+NS+I GY
Sbjct: 444 FLIRQGIQFEGMNSYLIDMYSKSGLIRISQKL--FEGSGYAERDQATWNSMISGYTQNGH 501
Query: 97 MEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKDVDRAICLLGEMVNEGLKPDVVTWTA 156
E+ VF M+ + P+ VT S++ ++ VD L G + + L +V +A
Sbjct: 502 TEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASA 561
Query: 157 LVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCTVILDGLFKCRFHSEAMSLFRAMEKSD 216
LV + + G A+++F KE V T T ++ G + A+SLF +M++S
Sbjct: 562 LVDMYSKAGAIKYAEDMFSQTKERNSV----TYTTMILGYGQHGMGERAISLFLSMQESG 617
Query: 217 IDLDIVVYNVMLDG 230
I D + + +L
Sbjct: 618 IKPDAITFVAVLSA 631
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 84/179 (46%), Gaps = 7/179 (3%)
Query: 12 VSYNCLIQGLFKFGRWKEGAGLLYEMMQKGVMPDVQTFSILVDGFGKEGLVSGARCVMGF 71
++N +I G + G ++ + +M+++ + P+ T + ++ + G V + + GF
Sbjct: 487 ATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGF 546
Query: 72 MVHVGVEPNVVTYNSLIGGYCLRHQMEEAMKVFDLMVRRGCLPSVVTYNSLIHGWCKVKD 131
+ ++ NV ++L+ Y ++ A +F R VTY ++I G+ +
Sbjct: 547 SIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNS----VTYTTMILGYGQHGM 602
Query: 132 VDRAICLLGEMVNEGLKPDVVTWTALVGGFCQVGKPLAAKELFFTMKEHGQVPNLQTCT 190
+RAI L M G+KPD +T+ A++ G ++F M+E V N+Q +
Sbjct: 603 GERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMRE---VYNIQPSS 658