Miyakogusa Predicted Gene
- Lj2g3v0520130.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0520130.1 CUFF.34646.1
(524 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 603 e-172
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 365 e-101
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 358 4e-99
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 350 1e-96
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 346 3e-95
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 339 2e-93
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 333 2e-91
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 332 3e-91
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 321 7e-88
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 5e-86
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 315 7e-86
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 7e-86
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 314 8e-86
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 1e-85
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 313 2e-85
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 311 6e-85
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 311 7e-85
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 310 1e-84
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 308 4e-84
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 302 3e-82
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 301 6e-82
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 300 1e-81
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 300 1e-81
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 298 6e-81
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 296 2e-80
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 296 2e-80
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 295 4e-80
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 295 6e-80
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 295 7e-80
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 293 1e-79
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 293 1e-79
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 293 2e-79
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 292 4e-79
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 292 4e-79
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 292 5e-79
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 291 5e-79
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 291 6e-79
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 9e-79
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 290 2e-78
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 290 2e-78
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 289 3e-78
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 289 3e-78
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 6e-78
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 288 8e-78
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 287 1e-77
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 2e-77
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 285 5e-77
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 285 6e-77
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 285 6e-77
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 284 9e-77
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 9e-77
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 1e-76
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 1e-76
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 279 4e-75
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 278 5e-75
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 278 5e-75
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 7e-75
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 9e-75
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 3e-74
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 3e-73
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 272 4e-73
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 4e-73
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 272 5e-73
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 1e-72
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 1e-72
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 1e-72
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 270 2e-72
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 269 3e-72
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 269 3e-72
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 7e-72
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 267 1e-71
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 2e-71
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 2e-71
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 3e-71
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 3e-71
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 3e-71
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 9e-71
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 2e-70
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 3e-70
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 5e-70
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 1e-69
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 2e-69
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 7e-69
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 257 1e-68
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 257 2e-68
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 4e-68
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 4e-68
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 6e-68
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 7e-68
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 7e-68
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 254 8e-68
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 9e-68
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 251 7e-67
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 1e-66
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 1e-66
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 2e-66
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 250 2e-66
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 2e-66
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 3e-66
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 3e-66
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 3e-66
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 5e-66
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 8e-66
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 1e-65
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 1e-65
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 247 1e-65
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 247 2e-65
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 2e-65
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 5e-65
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 6e-65
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 243 2e-64
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 2e-64
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 4e-64
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 240 1e-63
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 240 2e-63
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 240 2e-63
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 240 2e-63
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 3e-63
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 3e-63
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 4e-63
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 5e-63
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 238 7e-63
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 2e-62
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 2e-62
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 2e-62
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 2e-62
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 4e-62
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 7e-62
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 235 7e-62
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 8e-62
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 9e-62
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 9e-62
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 233 3e-61
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 4e-61
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 6e-61
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 5e-60
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 5e-60
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 6e-60
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 2e-59
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 2e-59
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 226 2e-59
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 226 2e-59
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 3e-59
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 3e-59
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 226 4e-59
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 225 5e-59
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 223 2e-58
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 223 2e-58
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 3e-58
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 221 8e-58
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 221 1e-57
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 5e-57
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 5e-57
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 8e-57
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 1e-56
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 217 1e-56
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 2e-56
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 1e-55
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 2e-55
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 2e-55
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 3e-55
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 3e-55
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 7e-55
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 9e-55
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 1e-54
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 210 2e-54
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 3e-54
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 209 4e-54
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 207 1e-53
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 1e-53
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 2e-53
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 3e-53
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 5e-53
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 7e-53
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 203 2e-52
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 202 4e-52
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 1e-51
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 200 2e-51
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 4e-51
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 2e-50
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 4e-49
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 183 3e-46
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 4e-45
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 4e-45
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 178 8e-45
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 178 1e-44
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 176 5e-44
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 161 1e-39
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 2e-38
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 150 2e-36
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 1e-31
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 8e-31
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 9e-29
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 2e-28
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 4e-27
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 96 7e-20
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 3e-18
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 4e-17
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 86 5e-17
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 7e-17
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 9e-17
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 9e-17
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 85 1e-16
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 84 3e-16
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 2e-15
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 80 3e-15
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 78 2e-14
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 77 4e-14
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 5e-14
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 76 7e-14
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 1e-13
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 74 3e-13
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 3e-13
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 3e-13
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 4e-13
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 72 8e-13
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 8e-13
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 72 1e-12
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 2e-12
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 70 3e-12
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 3e-12
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 5e-12
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 9e-12
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 2e-11
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 8e-11
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 65 8e-11
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 9e-11
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 65 1e-10
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 64 3e-10
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 5e-10
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 6e-10
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 8e-10
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 1e-09
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 61 2e-09
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 5e-09
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 59 6e-09
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 6e-09
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 59 9e-09
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 59 1e-08
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 57 5e-08
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 56 6e-08
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 56 6e-08
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 8e-08
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 53 6e-07
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 603 bits (1555), Expect = e-172, Method: Compositional matrix adjust.
Identities = 289/525 (55%), Positives = 371/525 (70%), Gaps = 27/525 (5%)
Query: 5 LNEQVLTILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDH 64
LN+ + ++ KS HLNHLKQ+Q+ + G +H+ F FKL+RFC L L NL YAR IFD
Sbjct: 23 LNQFISAVISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDR 82
Query: 65 LHSPNIYLYT--------------SSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSC--- 107
PN +LY SS FS FR M+ S P RPN+FIYP VLKS
Sbjct: 83 FSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVP---RPNHFIYPLVLKSTPYL 139
Query: 108 HESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAM 167
+ ST VH + K+GF Y +VQTAL+ SY+ + + A ++FDEM ERNVVS+TAM
Sbjct: 140 SSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAM 199
Query: 168 ISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGY 227
+SGYAR GD+ +A+ LF++MPERDVPSWNA++A CTQNG F E + LFR M+ + R
Sbjct: 200 LSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIR-- 257
Query: 228 RCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLAL 287
PN VT+VC LSAC T LQL K IH + Y+ D D F+SNSLVD+YGKCGNL
Sbjct: 258 ----PNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEE 313
Query: 288 ARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECG-GDVRPDGVTFVGLLNA 346
A VF+M K LT+WNSMINCFALHG+SE AIAVFE+M++ D++PD +TF+GLLNA
Sbjct: 314 ASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNA 373
Query: 347 CTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEV 406
CTHGGLV +G YF++MT +GIEP+IEHYGCL+DLLGRAGRFDEA+EV+ M M+ DE
Sbjct: 374 CTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEA 433
Query: 407 VWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILK 466
+WGSL N CK++G DLAE A K L+ ++P+NGGY M+AN+YGE+G W+E R +++K
Sbjct: 434 IWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIK 493
Query: 467 QQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESLIGF 511
Q +YK PG S IEID++VHQF+SLD+S P+ EE+Y +L+SLI F
Sbjct: 494 HQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSLISF 538
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/514 (36%), Positives = 296/514 (57%), Gaps = 28/514 (5%)
Query: 7 EQVLTILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLH 66
+ ++++L ++ H+ + A + H F F+L+R C+ TL ++ YA +F ++
Sbjct: 30 KTLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCS-TLDSVDYAYDVFSYVS 88
Query: 67 SPNIYLYTSST------------FSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTG 114
+PN+YLYT+ SL+ RM+ NS P+N++ VLK+C + +
Sbjct: 89 NPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNS----VLPDNYVITSVLKAC-DLKVCR 143
Query: 115 AVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARV 174
+HAQ++K GF V +++ Y + G L NA+K+FDEM +R+ V+ T MI+ Y+
Sbjct: 144 EIHAQVLKLGFGSSRSVGLKMMEIYGKS-GELVNAKKMFDEMPDRDHVAATVMINCYSEC 202
Query: 175 GDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNP 234
G + AL+LF ++ +D W A+I G +N ++ + LFREM N
Sbjct: 203 GFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENV-------SANE 255
Query: 235 VTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEM 294
T VC LSAC L+LG+W+H +V + +F+ N+L++MY +CG++ AR+VF +
Sbjct: 256 FTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRV 315
Query: 295 NPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVE 354
DK + S+N+MI+ A+HG S AI F MV G RP+ VT V LLNAC+HGGL++
Sbjct: 316 MRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRG--FRPNQVTLVALLNACSHGGLLD 373
Query: 355 QGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNG 414
G F M R + +EPQIEHYGC+VDLLGR GR +EA + + +EPD ++ G+L +
Sbjct: 374 IGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSA 433
Query: 415 CKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVP 474
CK++G +L E AK+L E + + G ++L+N+Y GKW E + ++ K P
Sbjct: 434 CKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEP 493
Query: 475 GCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESL 508
GCS IE+D+Q+H+F D + P E +Y L+ L
Sbjct: 494 GCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQEL 527
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 358 bits (920), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 182/512 (35%), Positives = 299/512 (58%), Gaps = 29/512 (5%)
Query: 10 LTILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSPN 69
+ L + N K++ A + G + + F K+V FC + ++ YA R+F+ + +PN
Sbjct: 14 IPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCD-KIEDMDYATRLFNQVSNPN 72
Query: 70 IYLYTS------------STFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRST---G 114
++LY S +++++L S P+ F +P + KSC S
Sbjct: 73 VFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFEL---PDRFTFPFMFKSCASLGSCYLGK 129
Query: 115 AVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARV 174
VH + K G + + + AL+D Y + L +A KVFDEM ER+V+S+ +++SGYAR+
Sbjct: 130 QVHGHLCKFGPRFHVVTENALIDMYMK-FDDLVDAHKVFDEMYERDVISWNSLLSGYARL 188
Query: 175 GDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNP 234
G + A LF M ++ + SW A+I+G T G + E + FREM E P+
Sbjct: 189 GQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIE-------PDE 241
Query: 235 VTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEM 294
++L+ L +C L+LGKWIH Y + F + + N+L++MY KCG ++ A ++F
Sbjct: 242 ISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQ 301
Query: 295 NPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVE 354
K + SW++MI+ +A HG + GAI F +M V+P+G+TF+GLL+AC+H G+ +
Sbjct: 302 MEGKDVISWSTMISGYAYHGNAHGAIETFNEMQR--AKVKPNGITFLGLLSACSHVGMWQ 359
Query: 355 QGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNG 414
+G YF+MM ++Y IEP+IEHYGCL+D+L RAG+ + A+E+ + M M+PD +WGSL +
Sbjct: 360 EGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSS 419
Query: 415 CKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVP 474
C+ G D+A A L+E++P + G ++LAN+Y +LGKW++V + ++++ + K P
Sbjct: 420 CRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTP 479
Query: 475 GCSWIEIDDQVHQFFSLDQSSPKAEELYSVLE 506
G S IE+++ V +F S D S P E+ VL+
Sbjct: 480 GGSLIEVNNIVQEFVSGDNSKPFWTEISIVLQ 511
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 350 bits (899), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 187/517 (36%), Positives = 306/517 (59%), Gaps = 29/517 (5%)
Query: 7 EQVLTILGKSNHLNHLKQLQAHL---TTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFD 63
E++ ++ KS ++ + Q+ A + L H KL R A + + ++ +F
Sbjct: 30 EKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYA-SHGKIRHSLALFH 88
Query: 64 HLHSPNIYLYTSS------------TFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESR 111
P+++L+T++ F L+ ++L + PN F + +LKSC ++
Sbjct: 89 QTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSE----INPNEFTFSSLLKSC-STK 143
Query: 112 STGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGY 171
S +H ++K G P V T LVD Y++G G + +A+KVFD M ER++VS TAMI+ Y
Sbjct: 144 SGKLIHTHVLKFGLGIDPYVATGLVDVYAKG-GDVVSAQKVFDRMPERSLVSSTAMITCY 202
Query: 172 ARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNK 231
A+ G+V++A LFD M ERD+ SWN +I G Q+GF ++ + LF++++A K
Sbjct: 203 AKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKP------K 256
Query: 232 PNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKV 291
P+ +T+V ALSAC L+ G+WIH +V + ++ + L+DMY KCG+L A V
Sbjct: 257 PDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLV 316
Query: 292 FEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGG 351
F P K + +WN+MI +A+HG S+ A+ +F +M G ++P +TF+G L AC H G
Sbjct: 317 FNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITG-LQPTDITFIGTLQACAHAG 375
Query: 352 LVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSL 411
LV +G FE M +EYGI+P+IEHYGCLV LLGRAG+ A E ++ M+M+ D V+W S+
Sbjct: 376 LVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSV 435
Query: 412 FNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSY 471
CK++G L + A+ L+ ++ N G ++L+N+Y +G ++ V V ++K++
Sbjct: 436 LGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIV 495
Query: 472 KVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESL 508
K PG S IEI+++VH+F + D+ K++E+Y++L +
Sbjct: 496 KEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKI 532
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 346 bits (887), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 183/507 (36%), Positives = 297/507 (58%), Gaps = 35/507 (6%)
Query: 19 LNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSPNIYLYTSSTF 78
+N +KQL AH G T +L L + NL YAR++FDH + +LY
Sbjct: 1 MNGIKQLHAHCLRTGVDETKDLLQRL-----LLIPNLVYARKLFDHHQNSCTFLYNK--- 52
Query: 79 SLFRRMLCNSNPTTT------------RPNNFIYPHVLKSCHES---RSTGAVHAQIVKT 123
L + + P + RP++ + + + R +H+Q ++
Sbjct: 53 -LIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRS 111
Query: 124 GFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKL 183
GFE T L+ +Y++ LG L A +VFDEM +R+V + AMI+GY R GD+ +A++L
Sbjct: 112 GFESDSFCCTTLITAYAK-LGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMEL 170
Query: 184 FDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSA 243
FD MP ++V SW +I+G +QNG +SE +++F L E+ + KPN +T+V L A
Sbjct: 171 FDSMPRKNVTSWTTVISGFSQNGNYSEALKMF-----LCMEKD-KSVKPNHITVVSVLPA 224
Query: 244 CGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFE-MNPDKGLTS 302
C + L++G+ + GY +N FF + ++ N+ ++MY KCG + +A+++FE + + L S
Sbjct: 225 CANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCS 284
Query: 303 WNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEM 362
WNSMI A HG+ + A+ +F QM+ G +PD VTFVGLL AC HGG+V +G F+
Sbjct: 285 WNSMIGSLATHGKHDEALTLFAQMLREGE--KPDAVTFVGLLLACVHGGMVVKGQELFKS 342
Query: 363 MTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTD 422
M + I P++EHYGC++DLLGR G+ EA ++++ M M+PD VVWG+L C +G +
Sbjct: 343 MEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVE 402
Query: 423 LAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVPGCSW-IEI 481
+AE A++ L +++P N G ++++N+Y KWD V + +++K++ K G S+ +E+
Sbjct: 403 IAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEV 462
Query: 482 DDQVHQFFSLDQSSPKAEELYSVLESL 508
VH+F D+S P++ E+Y VLE +
Sbjct: 463 GVDVHKFTVEDKSHPRSYEIYQVLEEI 489
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 339 bits (870), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 179/513 (34%), Positives = 286/513 (55%), Gaps = 31/513 (6%)
Query: 8 QVLTILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSN--LPYARRIFDHL 65
+ ++ L + + LKQ+ A + G + K + FC + S+ LPYA+ +FD
Sbjct: 16 ETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGF 75
Query: 66 HSPNIYLYT------------SSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRS- 112
P+ +L+ + L++RMLC+S P N + +P +LK+C +
Sbjct: 76 DRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPH----NAYTFPSLLKACSNLSAF 131
Query: 113 --TGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISG 170
T +HAQI K G+E +L++SY+ G A +FD + E + VS+ ++I G
Sbjct: 132 EETTQIHAQITKLGYENDVYAVNSLINSYAVT-GNFKLAHLLFDRIPEPDDVSWNSVIKG 190
Query: 171 YARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCN 230
Y + G +D AL LF +M E++ SW +I+G Q E ++LF EM E
Sbjct: 191 YVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVE------ 244
Query: 231 KPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARK 290
P+ V+L ALSAC L+ GKWIH Y+ K +DS + L+DMY KCG + A +
Sbjct: 245 -PDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALE 303
Query: 291 VFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHG 350
VF+ K + +W ++I+ +A HG AI+ F +M + G ++P+ +TF +L AC++
Sbjct: 304 VFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMG--IKPNVITFTAVLTACSYT 361
Query: 351 GLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGS 410
GLVE+G F M R+Y ++P IEHYGC+VDLLGRAG DEA ++ M ++P+ V+WG+
Sbjct: 362 GLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGA 421
Query: 411 LFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKS 470
L C+++ +L E + L+ IDP++GG + AN++ KWD+ R++K+Q
Sbjct: 422 LLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGV 481
Query: 471 YKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYS 503
KVPGCS I ++ H+F + D+S P+ E++ S
Sbjct: 482 AKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQS 514
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 333 bits (853), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 170/455 (37%), Positives = 273/455 (60%), Gaps = 16/455 (3%)
Query: 59 RRIFDHLHSPNIYLYTSSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRST---GA 115
R I ++ SP + S S++ RM P+ +P +L S H
Sbjct: 32 RAIVHNVSSPQRH----SPISVYLRM----RNHRVSPDFHTFPFLLPSFHNPLHLPLGQR 83
Query: 116 VHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVG 175
HAQI+ G ++ P V+T+L++ YS G L +A++VFD+ +++ ++ ++++ YA+ G
Sbjct: 84 THAQILLFGLDKDPFVRTSLLNMYS-SCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAG 142
Query: 176 DVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPV 235
+D A KLFDEMPER+V SW+ LI G G + E + LFREM + +PN
Sbjct: 143 LIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFV--RPNEF 200
Query: 236 TLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFE-M 294
T+ LSACG L+ GKW+H Y+ K +D + +L+DMY KCG+L A++VF +
Sbjct: 201 TMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNAL 260
Query: 295 NPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVE 354
K + ++++MI C A++G ++ +F +M ++ P+ VTFVG+L AC H GL+
Sbjct: 261 GSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTT-SDNINPNSVTFVGILGACVHRGLIN 319
Query: 355 QGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNG 414
+G SYF+MM E+GI P I+HYGC+VDL GR+G EA + M MEPD ++WGSL +G
Sbjct: 320 EGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 379
Query: 415 CKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVP 474
++ G E A K+L+E+DP N G ++L+NVY + G+W EV+ + ++ + KVP
Sbjct: 380 SRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVP 439
Query: 475 GCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESLI 509
GCS++E++ VH+F D+S ++E +Y++L+ ++
Sbjct: 440 GCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIM 474
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 332 bits (852), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 189/520 (36%), Positives = 286/520 (55%), Gaps = 45/520 (8%)
Query: 19 LNHLKQLQAHLTTLGHAHTDFYAFKLVRFCA---LTLSNLPYARRIFDHLHSPNIYLYTS 75
+ L Q+ A G A +++RFCA L +L YA +IF+ + N + + +
Sbjct: 36 IRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNT 95
Query: 76 S--------------TFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHES---RSTGAVHA 118
+LF M+ + PN F +P VLK+C ++ + +H
Sbjct: 96 IIRGFSESDEDKALIAITLFYEMMSDE---FVEPNRFTFPSVLKACAKTGKIQEGKQIHG 152
Query: 119 QIVKTGFEQYPIVQTALVDSY--------SRGLGGLGNAEK---VFDEMRERN--VVSFT 165
+K GF V + LV Y +R L EK V + R+R+ +V +
Sbjct: 153 LALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWN 212
Query: 166 AMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAER 225
MI GY R+GD +A LFD+M +R V SWN +I+G + NGFF + + +FREM ++
Sbjct: 213 VMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREM-----KK 267
Query: 226 GYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNL 285
G +PN VTLV L A L+LG+W+H Y + +D + ++L+DMY KCG +
Sbjct: 268 GD--IRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGII 325
Query: 286 ALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLN 345
A VFE P + + +W++MIN FA+HGQ+ AI F +M + G VRP V ++ LL
Sbjct: 326 EKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAG--VRPSDVAYINLLT 383
Query: 346 ACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDE 405
AC+HGGLVE+G YF M G+EP+IEHYGC+VDLLGR+G DEA E + M ++PD+
Sbjct: 384 ACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDD 443
Query: 406 VVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRIL 465
V+W +L C++ G ++ + A L+++ PH+ G + L+N+Y G W EV + +
Sbjct: 444 VIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRM 503
Query: 466 KQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVL 505
K++ K PGCS I+ID +H+F D S PKA+E+ S+L
Sbjct: 504 KEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSML 543
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 321 bits (823), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 180/521 (34%), Positives = 279/521 (53%), Gaps = 63/521 (12%)
Query: 7 EQVLTILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLH 66
E ++ G + L+ ++ H+ G F A KL+ + L ++ YAR++FD
Sbjct: 81 ELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYS-DLGSVDYARKVFDKTR 139
Query: 67 SPNIYLYTSSTFSLFRRMLC------------NSNPTTTRPNNFIYPHVLKSCHESRST- 113
IY++ + LFR + N + F Y +VLK+C S T
Sbjct: 140 KRTIYVWNA----LFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTV 195
Query: 114 ------GAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAM 167
+HA + + G+ + + T LVD Y
Sbjct: 196 NHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMY---------------------------- 227
Query: 168 ISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGY 227
AR G VD A +F MP R+V SW+A+IA +NG E +R FREM+ R
Sbjct: 228 ----ARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMM-----RET 278
Query: 228 RCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLAL 287
+ + PN VT+V L AC + L+ GK IHGY+ + + ++LV MYG+CG L +
Sbjct: 279 KDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEV 338
Query: 288 ARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNAC 347
++VF+ D+ + SWNS+I+ + +HG + AI +FE+M+ G P VTFV +L AC
Sbjct: 339 GQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGAS--PTPVTFVSVLGAC 396
Query: 348 THGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVV 407
+H GLVE+G FE M R++GI+PQIEHY C+VDLLGRA R DEA ++V+ M EP V
Sbjct: 397 SHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKV 456
Query: 408 WGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQ 467
WGSL C+++G +LAE A+++L ++P N G ++LA++Y E WDEV+ V ++L+
Sbjct: 457 WGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEH 516
Query: 468 QKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESL 508
+ K+PG W+E+ +++ F S+D+ +P E++++ L L
Sbjct: 517 RGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKL 557
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 143/330 (43%), Gaps = 40/330 (12%)
Query: 93 TRPNNFIYPHVLKSC-HESRSTGA--VHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNA 149
+ P+ Y ++ C H S + A VH I+ G +Q P + T L+ YS LG + A
Sbjct: 73 SSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYS-DLGSVDYA 131
Query: 150 EKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFS 209
KVFD+ R+R + WNAL T G
Sbjct: 132 RKVFDKTRKRTIY-------------------------------VWNALFRALTLAGHGE 160
Query: 210 EGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDS 269
E + L+ +M + E V C S C +++ GK IH ++ + +
Sbjct: 161 EVLGLYWKMNRIGVESDRFTY--TYVLKACVASECTVNHLMK-GKEIHAHLTRRGYSSHV 217
Query: 270 FISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVEC 329
+I +LVDMY + G + A VF P + + SW++MI C+A +G++ A+ F +M+
Sbjct: 218 YIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRE 277
Query: 330 GGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRF 389
D P+ VT V +L AC +EQG + R G++ + LV + GR G+
Sbjct: 278 TKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRR-GLDSILPVISALVTMYGRCGKL 336
Query: 390 DEAMEVVRGMSMEPDEVVWGSLFNGCKVYG 419
+ V M + D V W SL + V+G
Sbjct: 337 EVGQRVFDRMH-DRDVVSWNSLISSYGVHG 365
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 90/221 (40%), Gaps = 19/221 (8%)
Query: 196 NALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKW 255
N LI + G + IR+ + + P+ T + CGH S L
Sbjct: 50 NQLIQSLCKEGKLKQAIRVLSQE-----------SSPSQQTYELLILCCGHRSSLSDALR 98
Query: 256 IHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQ 315
+H ++ N D F++ L+ MY G++ ARKVF+ + + WN++ L G
Sbjct: 99 VHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGH 158
Query: 316 SEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGL----VEQGCSYFEMMTREYGIEP 371
E + ++ +M G V D T+ +L AC + +G +TR G
Sbjct: 159 GEEVLGLYWKMNRIG--VESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRR-GYSS 215
Query: 372 QIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLF 412
+ LVD+ R G D A V GM + + V W ++
Sbjct: 216 HVYIMTTLVDMYARFGCVDYASYVFGGMPVR-NVVSWSAMI 255
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 315 bits (807), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 180/548 (32%), Positives = 290/548 (52%), Gaps = 61/548 (11%)
Query: 10 LTILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSN-LPYARRIFDHLHSP 68
L++L +L L Q+ G ++ KL+ CA+++S+ LPYARR+ P
Sbjct: 9 LSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEP 68
Query: 69 NIYLYTS------------STFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRS--TG 114
+ +++ + ++ ++F M+ P++F + V+K+ RS TG
Sbjct: 69 DAFMFNTLVRGYSESDEPHNSVAVFVEMM---RKGFVFPDSFSFAFVIKAVENFRSLRTG 125
Query: 115 -AVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTA------- 166
+H Q +K G E + V T L+ Y G G + A KVFDEM + N+V++ A
Sbjct: 126 FQMHCQALKHGLESHLFVGTTLIGMYG-GCGCVEFARKVFDEMHQPNLVAWNAVITACFR 184
Query: 167 ------------------------MISGYARVGDVDSALKLFDEMPERDVPSWNALIAGC 202
M++GY + G+++SA ++F EMP RD SW+ +I G
Sbjct: 185 GNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGI 244
Query: 203 TQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYK 262
NG F+E FRE+ PN V+L LSAC + + GK +HG+V K
Sbjct: 245 AHNGSFNESFLYFRELQRAGM-------SPNEVSLTGVLSACSQSGSFEFGKILHGFVEK 297
Query: 263 NDFFVDSFISNSLVDMYGKCGNLALARKVFE-MNPDKGLTSWNSMINCFALHGQSEGAIA 321
+ ++N+L+DMY +CGN+ +AR VFE M + + SW SMI A+HGQ E A+
Sbjct: 298 AGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVR 357
Query: 322 VFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVD 381
+F +M G V PDG++F+ LL+AC+H GL+E+G YF M R Y IEP+IEHYGC+VD
Sbjct: 358 LFNEMTAYG--VTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVD 415
Query: 382 LLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGY 441
L GR+G+ +A + + M + P +VW +L C +G +LAE ++L E+DP+N G
Sbjct: 416 LYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGD 475
Query: 442 GIMLANVYGELGKWDEVRNVWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEEL 501
++L+N Y GKW +V ++ + + Q+ K S +E+ +++F + ++ E
Sbjct: 476 LVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEA 535
Query: 502 YSVLESLI 509
+ L+ +I
Sbjct: 536 HEKLKEII 543
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 315 bits (806), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 187/529 (35%), Positives = 280/529 (52%), Gaps = 53/529 (10%)
Query: 4 NLNEQVLTILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFD 63
N QV +++ KS L+ + +G A D Y+ N+ A+R+FD
Sbjct: 169 NKGVQVHSLIAKSPFLSDV--------YIGSALVDMYS---------KCGNVNDAQRVFD 211
Query: 64 HLHSPNIYLYTS------------STFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESR 111
+ N+ + S +F+ ML + P+ V+ +C
Sbjct: 212 EMGDRNVVSWNSLITCFEQNGPAVEALDVFQMML----ESRVEPDEVTLASVISACASLS 267
Query: 112 STGA---VHAQIVKTG-FEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAM 167
+ VH ++VK I+ A VD Y++ + A +FD M RNV++ T+M
Sbjct: 268 AIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAK-CSRIKEARFIFDSMPIRNVIAETSM 326
Query: 168 ISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGY 227
ISGYA +A +F +M ER+V SWNALIAG TQNG E + LF +R
Sbjct: 327 ISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLF-----CLLKRES 381
Query: 228 RCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFV------DSFISNSLVDMYGK 281
C P + L AC + L LG H +V K+ F D F+ NSL+DMY K
Sbjct: 382 VC--PTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVK 439
Query: 282 CGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFV 341
CG + VF ++ SWN+MI FA +G A+ +F +M+E G +PD +T +
Sbjct: 440 CGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGE--KPDHITMI 497
Query: 342 GLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSM 401
G+L+AC H G VE+G YF MTR++G+ P +HY C+VDLLGRAG +EA ++ M M
Sbjct: 498 GVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPM 557
Query: 402 EPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNV 461
+PD V+WGSL CKV+ L ++ A+KLLE++P N G ++L+N+Y ELGKW++V NV
Sbjct: 558 QPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNV 617
Query: 462 WRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESLIG 510
+ ++++ K PGCSWI+I H F D+S P+ ++++S+L+ LI
Sbjct: 618 RKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIA 666
Score = 172 bits (435), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 196/373 (52%), Gaps = 18/373 (4%)
Query: 100 YPHVLKSCHESRSTGA----VHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDE 155
+ +L SC +S+ + VHA ++K+GF +Q L+D+YS+ G L + +VFD+
Sbjct: 22 FAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSK-CGSLEDGRQVFDK 80
Query: 156 MRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLF 215
M +RN+ ++ ++++G ++G +D A LF MPERD +WN++++G Q+ E + F
Sbjct: 81 MPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYF 140
Query: 216 REMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSL 275
A+ + G+ N+ + LSAC + + G +H + K+ F D +I ++L
Sbjct: 141 ----AMMHKEGFVLNE---YSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSAL 193
Query: 276 VDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRP 335
VDMY KCGN+ A++VF+ D+ + SWNS+I CF +G + A+ VF+ M+E V P
Sbjct: 194 VDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLE--SRVEP 251
Query: 336 DGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEV 395
D VT +++AC ++ G + + + I VD+ + R EA +
Sbjct: 252 DEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFI 311
Query: 396 VRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKW 455
M + + + S+ +G + T A K+ E + + + ++A Y + G+
Sbjct: 312 FDSMPIR-NVIAETSMISGYAMAASTKAARLMFTKMAERNVVS--WNALIAG-YTQNGEN 367
Query: 456 DEVRNVWRILKQQ 468
+E +++ +LK++
Sbjct: 368 EEALSLFCLLKRE 380
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 153/356 (42%), Gaps = 88/356 (24%)
Query: 54 NLPYARRIFDHLHSPNIYLYTS------------STFSLFRRM----LCNSNPTTT---- 93
+L R++FD + NIY + S SLFR M C N +
Sbjct: 70 SLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQ 129
Query: 94 -------------------RPNNFIYPHVLKSC---HESRSTGAVHAQIVKTGFEQYPIV 131
N + + VL +C ++ VH+ I K+ F +
Sbjct: 130 HDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYI 189
Query: 132 QTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERD 191
+ALVD YS+ G + +A++VFDEM +RNVVS+ ++I+ + + G AL +F M E
Sbjct: 190 GSALVDMYSK-CGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESR 248
Query: 192 VPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQ 251
V +P+ VTL +SAC S ++
Sbjct: 249 V--------------------------------------EPDEVTLASVISACASLSAIK 270
Query: 252 LGKWIHGYVYKNDFFV-DSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCF 310
+G+ +HG V KND D +SN+ VDMY KC + AR +F+ P + + + SMI+ +
Sbjct: 271 VGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGY 330
Query: 311 ALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTRE 366
A+ ++ A +F +M E + V++ L+ T G E+ S F ++ RE
Sbjct: 331 AMAASTKAARLMFTKMAE------RNVVSWNALIAGYTQNGENEEALSLFCLLKRE 380
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 315 bits (806), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 193/586 (32%), Positives = 296/586 (50%), Gaps = 100/586 (17%)
Query: 7 EQVLTILGKSNHLNHLKQLQAHLTTLGHAHTDFY-AFKLVRFCALTL-SNLPYARRIFDH 64
E+ L L K +LN +KQL A + + H D + A KL+ +L +NL A R+F+
Sbjct: 20 EERLQDLPKCANLNQVKQLHAQIIR-RNLHEDLHIAPKLISALSLCRQTNL--AVRVFNQ 76
Query: 65 LHSPNIYLYTSSTFSLFRRMLCNSNPTTTR------------PNNFIYPHVLKSCHESRS 112
+ PN++L S L R NS P +NF YP +LK+C
Sbjct: 77 VQEPNVHLCNS----LIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSW 132
Query: 113 TGAV---HAQIVKTGFEQYPIVQTALVDSYSRGLGGLG---------------------- 147
V H I K G V AL+D YSR GGLG
Sbjct: 133 LPVVKMMHNHIEKLGLSSDIYVPNALIDCYSR-CGGLGVRDAMKLFEKMSERDTVSWNSM 191
Query: 148 -----------NAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWN 196
+A ++FDEM +R+++S+ M+ GYAR ++ A +LF++MPER+ SW+
Sbjct: 192 LGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWS 251
Query: 197 AL---------------------------------IAGCTQNGFFSEGIRLFREMVALAA 223
+ IAG + G E RL +MVA
Sbjct: 252 TMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGL 311
Query: 224 ERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCG 283
K + ++ L+AC + +L LG IH + +++ ++++ N+L+DMY KCG
Sbjct: 312 -------KFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCG 364
Query: 284 NLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGL 343
NL A VF P K L SWN+M++ +HG + AI +F +M G +RPD VTF+ +
Sbjct: 365 NLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREG--IRPDKVTFIAV 422
Query: 344 LNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEP 403
L +C H GL+++G YF M + Y + PQ+EHYGCLVDLLGR GR EA++VV+ M MEP
Sbjct: 423 LCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEP 482
Query: 404 DEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWR 463
+ V+WG+L C+++ D+A+ L+++DP + G +L+N+Y W+ V ++
Sbjct: 483 NVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRS 542
Query: 464 ILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESLI 509
+K K G S +E++D +H+F D+S PK++++Y +L SLI
Sbjct: 543 KMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSLI 588
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 314 bits (805), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 175/518 (33%), Positives = 290/518 (55%), Gaps = 27/518 (5%)
Query: 6 NEQVLTILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHL 65
N + I + + + LKQ+ A L G A +++ FC + S++ YA +F +
Sbjct: 25 NTYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRI 84
Query: 66 HSPNIYL-------YTSSTF-----SLFRRMLCNSNPTTTRPNNFIYPHVLKS---CHES 110
+ N ++ ++ S+F S+F MLC+S + +P YP V K+ ++
Sbjct: 85 NHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSS--PSVKPQRLTYPSVFKAYGRLGQA 142
Query: 111 RSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISG 170
R +H ++K G E ++ ++ Y G L A ++F M +VV++ +MI G
Sbjct: 143 RDGRQLHGMVIKEGLEDDSFIRNTMLHMYVT-CGCLIEAWRIFLGMIGFDVVAWNSMIMG 201
Query: 171 YARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCN 230
+A+ G +D A LFDEMP+R+ SWN++I+G +NG F + + +FREM E+
Sbjct: 202 FAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREM----QEKDV--- 254
Query: 231 KPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARK 290
KP+ T+V L+AC + + G+WIH Y+ +N F ++S + +L+DMY KCG +
Sbjct: 255 KPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLN 314
Query: 291 VFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHG 350
VFE P K L+ WNSMI A +G E A+ +F ++ G + PD V+F+G+L AC H
Sbjct: 315 VFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSG--LEPDSVSFIGVLTACAHS 372
Query: 351 GLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGS 410
G V + +F +M +Y IEP I+HY +V++LG AG +EA +++ M +E D V+W S
Sbjct: 373 GEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSS 432
Query: 411 LFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKS 470
L + C+ G ++A+ AAK L ++DP ++L+N Y G ++E ++K+++
Sbjct: 433 LLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQM 492
Query: 471 YKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESL 508
K GCS IE+D +VH+F S + PK+ E+YS+L+ L
Sbjct: 493 EKEVGCSSIEVDFEVHEFISCGGTHPKSAEIYSLLDIL 530
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 313 bits (803), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 176/515 (34%), Positives = 281/515 (54%), Gaps = 28/515 (5%)
Query: 10 LTILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSN-LPYARRIFDHLHSP 68
+ +L ++Q+ A L G D V+ AL+ L YA +I D P
Sbjct: 10 IALLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKP 69
Query: 69 NIYLYTS------------STFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCH--ESRSTG 114
++ S +F +RR+L + N +P+N+ ++++C R TG
Sbjct: 70 TLFALNSMIRAHCKSPVPEKSFDFYRRILSSGN--DLKPDNYTVNFLVQACTGLRMRETG 127
Query: 115 -AVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYAR 173
VH ++ GF+ P VQT L+ Y+ LG L + KVF+ + + V TAM++ AR
Sbjct: 128 LQVHGMTIRRGFDNDPHVQTGLISLYAE-LGCLDSCHKVFNSIPCPDFVCRTAMVTACAR 186
Query: 174 VGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPN 233
GDV A KLF+ MPERD +WNA+I+G Q G E + +F M K N
Sbjct: 187 CGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGV-------KVN 239
Query: 234 PVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFE 293
V ++ LSAC L G+W H Y+ +N + ++ +LVD+Y KCG++ A +VF
Sbjct: 240 GVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFW 299
Query: 294 MNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLV 353
+K + +W+S +N A++G E + +F M + G V P+ VTFV +L C+ G V
Sbjct: 300 GMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDG--VTPNAVTFVSVLRGCSVVGFV 357
Query: 354 EQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFN 413
++G +F+ M E+GIEPQ+EHYGCLVDL RAGR ++A+ +++ M M+P VW SL +
Sbjct: 358 DEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLH 417
Query: 414 GCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKV 473
++Y +L A+KK+LE++ N G ++L+N+Y + WD V +V + +K + K
Sbjct: 418 ASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQ 477
Query: 474 PGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESL 508
PGCS +E++ +VH+FF D+S PK ++ +V + +
Sbjct: 478 PGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDI 512
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 313 bits (801), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 153/380 (40%), Positives = 234/380 (61%), Gaps = 11/380 (2%)
Query: 129 PIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMP 188
P+V AL+D +S+ G + A ++FD + +R +VS+T MISGYAR G +D + KLFD+M
Sbjct: 293 PLVN-ALMDMFSK-CGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDME 350
Query: 189 ERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTS 248
E+DV WNA+I G Q + + LF+EM KP+ +T++ LSAC
Sbjct: 351 EKDVVLWNAMIGGSVQAKRGQDALALFQEMQT-------SNTKPDEITMIHCLSACSQLG 403
Query: 249 MLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMIN 308
L +G WIH Y+ K ++ + SLVDMY KCGN++ A VF + ++ ++I
Sbjct: 404 ALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIG 463
Query: 309 CFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYG 368
ALHG + AI+ F +M++ G + PD +TF+GLL+AC HGG+++ G YF M +
Sbjct: 464 GLALHGDASTAISYFNEMIDAG--IAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFN 521
Query: 369 IEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAA 428
+ PQ++HY +VDLLGRAG +EA ++ M ME D VWG+L GC+++G +L E AA
Sbjct: 522 LNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAA 581
Query: 429 KKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVPGCSWIEIDDQVHQF 488
KKLLE+DP + G ++L +YGE W++ + R++ ++ K+PGCS IE++ V +F
Sbjct: 582 KKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEF 641
Query: 489 FSLDQSSPKAEELYSVLESL 508
D+S P++E++Y L L
Sbjct: 642 IVRDKSRPESEKIYDRLHCL 661
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 118/462 (25%), Positives = 208/462 (45%), Gaps = 81/462 (17%)
Query: 5 LNEQVLTILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSN-LPYARRIFD 63
L+ +L++L K L HLKQ+QA + G F + +L+ FCAL+ S L Y+ +I
Sbjct: 52 LHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILK 111
Query: 64 HLHSPNIYLYTSS------------TFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESR 111
+ +PNI+ + + +F L+++ML +RP++F YP + K C + R
Sbjct: 112 GIENPNIFSWNVTIRGFSESENPKESFLLYKQML-RHGCCESRPDHFTYPVLFKVCADLR 170
Query: 112 STGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGY 171
+ H LG+ K+ E+ A I +
Sbjct: 171 LSSLGHMI--------------------------LGHVLKLRLELVSH---VHNASIHMF 201
Query: 172 ARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNK 231
A GD+++A K+FDE P RD+ SWN LI G + G + I +++ M + K
Sbjct: 202 ASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGV-------K 254
Query: 232 PNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKV 291
P+ VT++ +S+C L GK + YV +N + + N+L+DM+ KCG++ AR++
Sbjct: 255 PDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRI 314
Query: 292 FEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVE---------CGGDV--------- 333
F+ + + SW +MI+ +A G + + +F+ M E GG V
Sbjct: 315 FDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDAL 374
Query: 334 -----------RPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDL 382
+PD +T + L+AC+ G ++ G + +Y + + LVD+
Sbjct: 375 ALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGI-WIHRYIEKYSLSLNVALGTSLVDM 433
Query: 383 LGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLA 424
+ G EA+ V G+ + + + ++ G ++G A
Sbjct: 434 YAKCGNISEALSVFHGIQTR-NSLTYTAIIGGLALHGDASTA 474
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 138/278 (49%), Gaps = 15/278 (5%)
Query: 152 VFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEG 211
+ D +++F A+ + +D ++K+ + ++ SWN I G +++ E
Sbjct: 82 ILDPFASSRLIAFCAL----SESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKES 137
Query: 212 IRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFI 271
L+++M+ G ++P+ T C + LG I G+V K + S +
Sbjct: 138 FLLYKQML----RHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHV 193
Query: 272 SNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGG 331
N+ + M+ CG++ ARKVF+ +P + L SWN +IN + G++E AI V++ M G
Sbjct: 194 HNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEG- 252
Query: 332 DVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDE 391
V+PD VT +GL+++C+ G + +G ++E + +E G+ I L+D+ + G E
Sbjct: 253 -VKPDDVTMIGLVSSCSMLGDLNRGKEFYEYV-KENGLRMTIPLVNALMDMFSKCGDIHE 310
Query: 392 AMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAK 429
A + + + V W ++ +G Y R L + + K
Sbjct: 311 ARRIFDNLE-KRTIVSWTTMISG---YARCGLLDVSRK 344
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 311 bits (798), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 180/530 (33%), Positives = 288/530 (54%), Gaps = 39/530 (7%)
Query: 1 MKPNLNEQVLTILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARR 60
+ LN V ++ N+L LKQ ++ G + K + C+ +L YA
Sbjct: 10 LSSGLNWFVTSLKIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACS-NAGHLRYAYS 68
Query: 61 IFDHLHSPNIYLYT---------------SSTFSLFRRM--LCNSNPTTTRPNNFIYPHV 103
+F H PN YL+ S +++R++ LC +P+ F +P V
Sbjct: 69 VFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALC------AKPDTFTFPFV 122
Query: 104 LKSCHESRST---GAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERN 160
LK +H Q+V GF+ V T L+ Y GGLG+A K+FDEM ++
Sbjct: 123 LKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYF-SCGGLGDARKMFDEMLVKD 181
Query: 161 VVSFTAMISGYARVGDVDSALKLFDEMP--ERDVPSWNALIAGCTQNGFFSEGIRLFREM 218
V + A+++GY +VG++D A L + MP R+ SW +I+G ++G SE I +F+ M
Sbjct: 182 VNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRM 241
Query: 219 VALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDM 278
+ E P+ VTL+ LSAC L+LG+ I YV ++N+++DM
Sbjct: 242 LMENVE-------PDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDM 294
Query: 279 YGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGV 338
Y K GN+ A VFE ++ + +W ++I A HG A+A+F +MV+ G VRP+ V
Sbjct: 295 YAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAG--VRPNDV 352
Query: 339 TFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRG 398
TF+ +L+AC+H G V+ G F M +YGI P IEHYGC++DLLGRAG+ EA EV++
Sbjct: 353 TFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKS 412
Query: 399 MSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEV 458
M + + +WGSL V+ +L E A +L++++P+N G ++LAN+Y LG+WDE
Sbjct: 413 MPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDES 472
Query: 459 RNVWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESL 508
R + ++K K+ G S IE++++V++F S D + P+ E ++ +L+ +
Sbjct: 473 RMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIHEILQEM 522
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 311 bits (797), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 144/346 (41%), Positives = 215/346 (62%), Gaps = 9/346 (2%)
Query: 165 TAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAE 224
TA+ + Y+++ +++SA KLFDE PE+ +PSWNA+I+G TQNG + I LFREM
Sbjct: 358 TALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEF- 416
Query: 225 RGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGN 284
PNPVT+ C LSAC L LGKW+H V DF ++S +L+ MY KCG+
Sbjct: 417 ------SPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGS 470
Query: 285 LALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLL 344
+A AR++F++ K +WN+MI+ + LHGQ + A+ +F +M+ G + P VTF+ +L
Sbjct: 471 IAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSG--ITPTPVTFLCVL 528
Query: 345 NACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPD 404
AC+H GLV++G F M YG EP ++HY C+VD+LGRAG A++ + MS+EP
Sbjct: 529 YACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPG 588
Query: 405 EVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRI 464
VW +L C+++ T+LA ++KL E+DP N GY ++L+N++ + + V +
Sbjct: 589 SSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQT 648
Query: 465 LKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESLIG 510
K++K K PG + IEI + H F S DQS P+ +E+Y LE L G
Sbjct: 649 AKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEG 694
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 130/257 (50%), Gaps = 14/257 (5%)
Query: 164 FTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAA 223
T IS Y++ G + LF E + D+ ++NA+I G T NG + LF+E++ A
Sbjct: 259 LTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGA 318
Query: 224 ERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCG 283
+ TLV + GH L L IHGY K++F + +S +L +Y K
Sbjct: 319 -------RLRSSTLVSLVPVSGH---LMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLN 368
Query: 284 NLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGL 343
+ ARK+F+ +P+K L SWN+MI+ + +G +E AI++F +M + + P+ VT +
Sbjct: 369 EIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQK--SEFSPNPVTITCI 426
Query: 344 LNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEP 403
L+AC G + G + + R E I L+ + + G EA + M+ +
Sbjct: 427 LSACAQLGALSLG-KWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMT-KK 484
Query: 404 DEVVWGSLFNGCKVYGR 420
+EV W ++ +G ++G+
Sbjct: 485 NEVTWNTMISGYGLHGQ 501
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 101/491 (20%), Positives = 200/491 (40%), Gaps = 62/491 (12%)
Query: 10 LTILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSPN 69
L +S ++HL Q A + G + KL + + L + YAR IF + P+
Sbjct: 24 LDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLS-DLGAIYYARDIFLSVQRPD 82
Query: 70 IYLYTSSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCH-ESRSTGAVHAQIVKTGFEQY 128
++L+ L R N +P ++ ++ H+ KS + S+ A +GF
Sbjct: 83 VFLFNV----LMRGFSVNESPHSSLS---VFAHLRKSTDLKPNSSTYAFAISAASGFRD- 134
Query: 129 PIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMP 188
D R + G + E+ + + ++ Y + V+ A K+FD MP
Sbjct: 135 --------DRAGRVIHGQAVVDGCDSEL-----LLGSNIVKMYFKFWRVEDARKVFDRMP 181
Query: 189 ERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTS 248
E+D WN +I+G +N + E I++FR+++ C + + TL+ L A
Sbjct: 182 EKDTILWNTMISGYRKNEMYVESIQVFRDLI------NESCTRLDTTTLLDILPAVAELQ 235
Query: 249 MLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMIN 308
L+LG IH K + ++ + +Y KCG + + +F + ++N+MI+
Sbjct: 236 ELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIH 295
Query: 309 CFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVE------------QG 356
+ +G++E ++++F++++ G +R T V L+ H L+
Sbjct: 296 GYTSNGETELSLSLFKELMLSGARLRSS--TLVSLVPVSGHLMLIYAIHGYCLKSNFLSH 353
Query: 357 CSYFEMMTREYGIEPQIE---------------HYGCLVDLLGRAGRFDEAMEVVRGMS- 400
S +T Y +IE + ++ + G ++A+ + R M
Sbjct: 354 ASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQK 413
Query: 401 --MEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGY-GIMLANVYGELGKWDE 457
P+ V + + C G L ++ + D + Y L +Y + G E
Sbjct: 414 SEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAE 473
Query: 458 VRNVWRILKQQ 468
R ++ ++ ++
Sbjct: 474 ARRLFDLMTKK 484
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 116/233 (49%), Gaps = 18/233 (7%)
Query: 119 QIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMR----ERNVVSFTAMISGYARV 174
++ K+ F P+ T ++ + ++ LG L + V D +R E ++ TA+I YA+
Sbjct: 410 EMQKSEFSPNPVTITCILSACAQ-LGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKC 468
Query: 175 GDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNP 234
G + A +LFD M +++ +WN +I+G +G E + +F EM+ P P
Sbjct: 469 GSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGI-------TPTP 521
Query: 235 VTLVCALSACGHTSMLQLGKWI-HGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFE 293
VT +C L AC H +++ G I + +++ F +VD+ G+ G+L A + E
Sbjct: 522 VTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIE 581
Query: 294 -MNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLN 345
M+ + G + W +++ +H + A V E++ E + PD V + LL+
Sbjct: 582 AMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFE----LDPDNVGYHVLLS 630
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 310 bits (795), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 152/471 (32%), Positives = 270/471 (57%), Gaps = 29/471 (6%)
Query: 55 LPYARRIFDHLHSPNIYLYTS------------STFSLFRRMLCNSNPTTTRPNNFIYPH 102
+ YAR +FD + ++ + + F LF M + P+ I +
Sbjct: 162 INYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEM----KDSNVMPDEMILCN 217
Query: 103 VLKSCHES---RSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRER 159
++ +C + R A++ +++ + TALV Y+ G G + A + F +M R
Sbjct: 218 IVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYA-GAGCMDMAREFFRKMSVR 276
Query: 160 NVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMV 219
N+ TAM+SGY++ G +D A +FD+ ++D+ W +I+ ++ + E +R+F EM
Sbjct: 277 NLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMC 336
Query: 220 ALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMY 279
KP+ V++ +SAC + +L KW+H ++ N + I+N+L++MY
Sbjct: 337 CSGI-------KPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMY 389
Query: 280 GKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVT 339
KCG L R VFE P + + SW+SMIN ++HG++ A+++F +M + +V P+ VT
Sbjct: 390 AKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQ--ENVEPNEVT 447
Query: 340 FVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGM 399
FVG+L C+H GLVE+G F MT EY I P++EHYGC+VDL GRA EA+EV+ M
Sbjct: 448 FVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESM 507
Query: 400 SMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVR 459
+ + V+WGSL + C+++G +L +FAAK++LE++P + G ++++N+Y +W++VR
Sbjct: 508 PVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVR 567
Query: 460 NVWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESLIG 510
N+ R+++++ +K G S I+ + + H+F D+ ++ E+Y+ L+ ++
Sbjct: 568 NIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVS 618
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 119/453 (26%), Positives = 198/453 (43%), Gaps = 47/453 (10%)
Query: 9 VLTILGKSNHLNHLKQLQAHL--TTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLH 66
+L L LNH+KQL AH+ T + H +F + + NL YA +F +
Sbjct: 15 ILEKLSFCKSLNHIKQLHAHILRTVINHK---LNSFLFNLSVSSSSINLSYALNVFSSIP 71
Query: 67 SPNIYLYTSSTFSLFRRMLCNSN-PTTT------------RPNNFIYPHVLKSCHESRST 113
SP S F+ F R L S+ P T R + F + +LK+ + +
Sbjct: 72 SPP----ESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSAL 127
Query: 114 ---GAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISG 170
+H K P V+T +D Y+ G + A VFDEM R+VV++ MI
Sbjct: 128 FEGMELHGVAFKIATLCDPFVETGFMDMYA-SCGRINYARNVFDEMSHRDVVTWNTMIER 186
Query: 171 YARVGDVDSALKLFDEMPERDV-PSWNAL---IAGCTQNGFFSEGIRLFREMVALAAERG 226
Y R G VD A KLF+EM + +V P L ++ C + G +R R + E
Sbjct: 187 YCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTG----NMRYNRAIYEFLIEND 242
Query: 227 YRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLA 286
R + LV + G M + ++ + F+S ++V Y KCG L
Sbjct: 243 VRMDTHLLTALVTMYAGAGCMDMAR-------EFFRKMSVRNLFVSTAMVSGYSKCGRLD 295
Query: 287 LARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNA 346
A+ +F+ K L W +MI+ + + A+ VFE+M C ++PD V+ +++A
Sbjct: 296 DAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEM--CCSGIKPDVVSMFSVISA 353
Query: 347 CTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEV 406
C + G++++ + G+E ++ L+++ + G D +V M + V
Sbjct: 354 CANLGILDKA-KWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMP-RRNVV 411
Query: 407 VWGSLFNGCKVYGRTD--LAEFAAKKLLEIDPH 437
W S+ N ++G L+ FA K ++P+
Sbjct: 412 SWSSMINALSMHGEASDALSLFARMKQENVEPN 444
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 308 bits (790), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 176/519 (33%), Positives = 273/519 (52%), Gaps = 67/519 (12%)
Query: 43 KLVRFCALTLSNLPYARRIFDHLHSPNIYL-------YTSSTF-----SLFRRMLCNSNP 90
KL+R A +L ++ AR++FD + N+ + Y ++ F +F M C N
Sbjct: 79 KLMRAYA-SLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTM-CGCN- 135
Query: 91 TTTRPNNFIYPHVLKSCHESRST---GAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLG 147
RP+++ +P VLK+C S + +H K G V LV Y + G L
Sbjct: 136 --VRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGK-CGFLS 192
Query: 148 NAEKVFDEMRERNVVSFTAMISGYARVGDVDSALK------------------------- 182
A V DEM R+VVS+ +++ GYA+ D AL+
Sbjct: 193 EARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVS 252
Query: 183 ------------LFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCN 230
+F +M ++ + SWN +I +N E + L+ M A E
Sbjct: 253 NTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFE------ 306
Query: 231 KPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARK 290
P+ V++ L ACG TS L LGK IHGY+ + + + N+L+DMY KCG L AR
Sbjct: 307 -PDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARD 365
Query: 291 VFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHG 350
VFE + + SW +MI+ + G+ A+A+F ++ + G + PD + FV L AC+H
Sbjct: 366 VFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSG--LVPDSIAFVTTLAACSHA 423
Query: 351 GLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGS 410
GL+E+G S F++MT Y I P++EH C+VDLLGRAG+ EA ++ MSMEP+E VWG+
Sbjct: 424 GLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGA 483
Query: 411 LFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKS 470
L C+V+ TD+ AA KL ++ P GY ++L+N+Y + G+W+EV N+ I+K +
Sbjct: 484 LLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGL 543
Query: 471 YKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESLI 509
K PG S +E++ +H F D+S P+++E+Y L+ L+
Sbjct: 544 KKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLV 582
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 84/188 (44%), Gaps = 5/188 (2%)
Query: 254 KWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALH 313
+ +H + D +S + L+ Y ++A ARKVF+ P++ + N MI + +
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 314 GQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQI 373
G + VF M CG +VRPD TF +L AC+ G + G T+ G+ +
Sbjct: 119 GFYGEGVKVFGTM--CGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATK-VGLSSTL 175
Query: 374 EHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLE 433
LV + G+ G EA V+ MS D V W SL G R D A +++
Sbjct: 176 FVGNGLVSMYGKCGFLSEARLVLDEMSRR-DVVSWNSLVVGYAQNQRFDDALEVCREMES 234
Query: 434 ID-PHNGG 440
+ H+ G
Sbjct: 235 VKISHDAG 242
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 302 bits (774), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 170/523 (32%), Positives = 288/523 (55%), Gaps = 36/523 (6%)
Query: 10 LTILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLS-NLP-----YARRIFD 63
L +L + + LK + L F A +L+ C + N P YA IF
Sbjct: 16 LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75
Query: 64 HLHSPNIYLYT------------SSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESR 111
+ +PN++++ S F + +ML + P+N +P ++K+ E
Sbjct: 76 QIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQML----KSRIWPDNITFPFLIKASSEME 131
Query: 112 ST---GAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMI 168
H+QIV+ GF+ V+ +LV Y+ G + A ++F +M R+VVS+T+M+
Sbjct: 132 CVLVGEQTHSQIVRFGFQNDVYVENSLVHMYA-NCGFIAAAGRIFGQMGFRDVVSWTSMV 190
Query: 169 SGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYR 228
+GY + G V++A ++FDEMP R++ +W+ +I G +N F + I LF M G
Sbjct: 191 AGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFM----KREGVV 246
Query: 229 CNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALA 288
N+ +V +S+C H L+ G+ + YV K+ V+ + +LVDM+ +CG++ A
Sbjct: 247 ANE---TVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKA 303
Query: 289 RKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACT 348
VFE P+ SW+S+I A+HG + A+ F QM+ G P VTF +L+AC+
Sbjct: 304 IHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLG--FIPRDVTFTAVLSACS 361
Query: 349 HGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVW 408
HGGLVE+G +E M +++GIEP++EHYGC+VD+LGRAG+ EA + M ++P+ +
Sbjct: 362 HGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPIL 421
Query: 409 GSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQ 468
G+L CK+Y T++AE L+++ P + GY ++L+N+Y G+WD++ ++ ++K++
Sbjct: 422 GALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEK 481
Query: 469 KSYKVPGCSWIEIDDQVHQF-FSLDQSSPKAEELYSVLESLIG 510
K PG S IEID ++++F DQ P+ ++ E ++G
Sbjct: 482 LVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILG 524
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 301 bits (772), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 146/393 (37%), Positives = 242/393 (61%), Gaps = 13/393 (3%)
Query: 131 VQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPER 190
+ A++D Y++ G + +A+++FD M E++ V++T M+ GYA D ++A ++ + MP++
Sbjct: 269 LANAMLDMYTK-CGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQK 327
Query: 191 DVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSML 250
D+ +WNALI+ QNG +E + +F E+ + + K N +TLV LSAC L
Sbjct: 328 DIVAWNALISAYEQNGKPNEALIVFHEL------QLQKNMKLNQITLVSTLSACAQVGAL 381
Query: 251 QLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCF 310
+LG+WIH Y+ K+ ++ ++++L+ MY KCG+L +R+VF + + W++MI
Sbjct: 382 ELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGL 441
Query: 311 ALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIE 370
A+HG A+ +F +M E +V+P+GVTF + AC+H GLV++ S F M YGI
Sbjct: 442 AMHGCGNEAVDMFYKMQE--ANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIV 499
Query: 371 PQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKK 430
P+ +HY C+VD+LGR+G ++A++ + M + P VWG+L CK++ +LAE A +
Sbjct: 500 PEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTR 559
Query: 431 LLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVPGCSWIEIDDQVHQFFS 490
LLE++P N G ++L+N+Y +LGKW+ V + + ++ K PGCS IEID +H+F S
Sbjct: 560 LLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLS 619
Query: 491 LDQSSPKAEELY----SVLESLIGFGNEVMIEQ 519
D + P +E++Y V+E L G E I Q
Sbjct: 620 GDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQ 652
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/458 (23%), Positives = 202/458 (44%), Gaps = 94/458 (20%)
Query: 10 LTILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALT-LSNLPYARRIFDHLHSP 68
++++ + L LKQ H+ G + A KL AL+ ++L YAR++FD + P
Sbjct: 34 ISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKP 93
Query: 69 NIYLYTSSTFSLFRRMLCNSNPTTT-------------RPNNFIYPHVLKSCHESRSTG- 114
N + + +L R +P + PN + +P ++K+ E S
Sbjct: 94 NSFAWN----TLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSL 149
Query: 115 --AVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYA 172
++H VK+ V +L+ Y G L +A KVF ++E++VVS+ +MI+G+
Sbjct: 150 GQSLHGMAVKSAVGSDVFVANSLIHCYF-SCGDLDSACKVFTTIKEKDVVSWNSMINGFV 208
Query: 173 RVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKP 232
+ G D AL+LF +M DV K
Sbjct: 209 QKGSPDKALELFKKMESEDV--------------------------------------KA 230
Query: 233 NPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVF 292
+ VT+V LSAC L+ G+ + Y+ +N V+ ++N+++DMY KCG++ A+++F
Sbjct: 231 SHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLF 290
Query: 293 E-----------------------------MN--PDKGLTSWNSMINCFALHGQSEGAIA 321
+ +N P K + +WN++I+ + +G+ A+
Sbjct: 291 DAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALI 350
Query: 322 VFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVD 381
VF ++ + +++ + +T V L+AC G +E G + +++GI L+
Sbjct: 351 VFHEL-QLQKNMKLNQITLVSTLSACAQVGALELG-RWIHSYIKKHGIRMNFHVTSALIH 408
Query: 382 LLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYG 419
+ + G +++ EV + + D VW ++ G ++G
Sbjct: 409 MYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMHG 445
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 176/392 (44%), Gaps = 53/392 (13%)
Query: 88 SNPTTTRPNNFIYPHV--LKSCHESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGG 145
SNP NN H+ ++ C R H +++TG D YS
Sbjct: 19 SNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTG---------TFSDPYS----- 64
Query: 146 LGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQN 205
A K+F A +S +A ++ A K+FDE+P+ + +WN LI
Sbjct: 65 ---ASKLFA----------MAALSSFA---SLEYARKVFDEIPKPNSFAWNTLIRAYASG 108
Query: 206 GFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDF 265
I F +MV+ + +C PN T + A S L LG+ +HG K+
Sbjct: 109 PDPVLSIWAFLDMVSES-----QC-YPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAV 162
Query: 266 FVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQ 325
D F++NSL+ Y CG+L A KVF +K + SWNSMIN F G + A+ +F++
Sbjct: 163 GSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKK 222
Query: 326 MVECGGDVRPDGVTFVGLLNACTHGGLVE---QGCSYFEMMTREYGIEPQIEHYGCLVDL 382
M DV+ VT VG+L+AC +E Q CSY E E + + ++D+
Sbjct: 223 ME--SEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIE----ENRVNVNLTLANAMLDM 276
Query: 383 LGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYG 442
+ G ++A + M E D V W ++ +G Y ++ E AA+++L P
Sbjct: 277 YTKCGSIEDAKRLFDAME-EKDNVTWTTMLDG---YAISEDYE-AAREVLNSMPQKDIVA 331
Query: 443 I-MLANVYGELGKWDEVRNVWRILKQQKSYKV 473
L + Y + GK +E V+ L+ QK+ K+
Sbjct: 332 WNALISAYEQNGKPNEALIVFHELQLQKNMKL 363
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 300 bits (769), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 164/511 (32%), Positives = 283/511 (55%), Gaps = 21/511 (4%)
Query: 9 VLTILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSP 68
V++ K L +++ A + G D LV + + + A+R+FD +
Sbjct: 242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM-YMKCNAIDVAKRLFDEYGAS 300
Query: 69 NIYLYTSSTFSLFRRMLCNSN--------PTTTRPNNFIYPHVLKSCHESRST---GAVH 117
N+ L + + R+ L + RP+ + SC + R+ + H
Sbjct: 301 NLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCH 360
Query: 118 AQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDV 177
+++ GFE + + AL+D Y + A ++FD M + VV++ ++++GY G+V
Sbjct: 361 GYVLRNGFESWDNICNALIDMYMK-CHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEV 419
Query: 178 DSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTL 237
D+A + F+ MPE+++ SWN +I+G Q F E I +F ++ ++ G + VT+
Sbjct: 420 DAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF---CSMQSQEGV---NADGVTM 473
Query: 238 VCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPD 297
+ SACGH L L KWI+ Y+ KN +D + +LVDM+ +CG+ A +F +
Sbjct: 474 MSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTN 533
Query: 298 KGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGC 357
+ +++W + I A+ G +E AI +F+ M+E G ++PDGV FVG L AC+HGGLV+QG
Sbjct: 534 RDVSAWTAAIGAMAMAGNAERAIELFDDMIEQG--LKPDGVAFVGALTACSHGGLVQQGK 591
Query: 358 SYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKV 417
F M + +G+ P+ HYGC+VDLLGRAG +EA++++ M MEP++V+W SL C+V
Sbjct: 592 EIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRV 651
Query: 418 YGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVPGCS 477
G ++A +AA+K+ + P G ++L+NVY G+W+++ V +K++ K PG S
Sbjct: 652 QGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTS 711
Query: 478 WIEIDDQVHQFFSLDQSSPKAEELYSVLESL 508
I+I + H+F S D+S P+ + ++L+ +
Sbjct: 712 SIQIRGKTHEFTSGDESHPEMPNIEAMLDEV 742
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 130/497 (26%), Positives = 212/497 (42%), Gaps = 65/497 (13%)
Query: 13 LGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLV-RFCAL-TLSNLPYARRIFDHLHS-PN 69
L ++ LK LT G + KLV R C L T +L +A+ +F++ S
Sbjct: 39 LKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGT 98
Query: 70 IYLYTSSTFSLFRRMLCNSN--------PTTTRPNNFIYPHVLKSCHESRSTG---AVHA 118
++Y S LCN + P+ + +P L +C +SR+ G +H
Sbjct: 99 CFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHG 158
Query: 119 QIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVD 178
IVK G+ + VQ +LV Y A G++D
Sbjct: 159 LIVKMGYAKDLFVQNSLVHFY--------------------------------AECGELD 186
Query: 179 SALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLV 238
SA K+FDEM ER+V SW ++I G + F + + LF MV R PN VT+V
Sbjct: 187 SARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMV-----RDEEVT-PNSVTMV 240
Query: 239 CALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDK 298
C +SAC L+ G+ ++ ++ + V+ + ++LVDMY KC + +A+++F+
Sbjct: 241 CVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGAS 300
Query: 299 GLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCS 358
L N+M + + G + A+ VF M++ G VRPD ++ + +++C+ + G S
Sbjct: 301 NLDLCNAMASNYVRQGLTREALGVFNLMMDSG--VRPDRISMLSAISSCSQLRNILWGKS 358
Query: 359 YFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVY 418
+ R G E L+D+ + R D A + MS V W S+ G
Sbjct: 359 CHGYVLRN-GFESWDNICNALIDMYMKCHRQDTAFRIFDRMS-NKTVVTWNSIVAGYVEN 416
Query: 419 GRTDLAEFAAKKLLEIDPHNGGYG---IMLANVYGELGKWDEVRNVWRILKQQKSYKVPG 475
G D AA + E P I+ V G L ++E V+ ++ Q+ G
Sbjct: 417 GEVD----AAWETFETMPEKNIVSWNTIISGLVQGSL--FEEAIEVFCSMQSQEGVNADG 470
Query: 476 CSWIEIDDQVHQFFSLD 492
+ + I +LD
Sbjct: 471 VTMMSIASACGHLGALD 487
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 300 bits (769), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 164/511 (32%), Positives = 283/511 (55%), Gaps = 21/511 (4%)
Query: 9 VLTILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSP 68
V++ K L +++ A + G D LV + + + A+R+FD +
Sbjct: 242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM-YMKCNAIDVAKRLFDEYGAS 300
Query: 69 NIYLYTSSTFSLFRRMLCNSN--------PTTTRPNNFIYPHVLKSCHESRST---GAVH 117
N+ L + + R+ L + RP+ + SC + R+ + H
Sbjct: 301 NLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCH 360
Query: 118 AQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDV 177
+++ GFE + + AL+D Y + A ++FD M + VV++ ++++GY G+V
Sbjct: 361 GYVLRNGFESWDNICNALIDMYMK-CHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEV 419
Query: 178 DSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTL 237
D+A + F+ MPE+++ SWN +I+G Q F E I +F ++ ++ G + VT+
Sbjct: 420 DAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF---CSMQSQEGV---NADGVTM 473
Query: 238 VCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPD 297
+ SACGH L L KWI+ Y+ KN +D + +LVDM+ +CG+ A +F +
Sbjct: 474 MSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTN 533
Query: 298 KGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGC 357
+ +++W + I A+ G +E AI +F+ M+E G ++PDGV FVG L AC+HGGLV+QG
Sbjct: 534 RDVSAWTAAIGAMAMAGNAERAIELFDDMIEQG--LKPDGVAFVGALTACSHGGLVQQGK 591
Query: 358 SYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKV 417
F M + +G+ P+ HYGC+VDLLGRAG +EA++++ M MEP++V+W SL C+V
Sbjct: 592 EIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRV 651
Query: 418 YGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVPGCS 477
G ++A +AA+K+ + P G ++L+NVY G+W+++ V +K++ K PG S
Sbjct: 652 QGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTS 711
Query: 478 WIEIDDQVHQFFSLDQSSPKAEELYSVLESL 508
I+I + H+F S D+S P+ + ++L+ +
Sbjct: 712 SIQIRGKTHEFTSGDESHPEMPNIEAMLDEV 742
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 130/497 (26%), Positives = 212/497 (42%), Gaps = 65/497 (13%)
Query: 13 LGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLV-RFCAL-TLSNLPYARRIFDHLHS-PN 69
L ++ LK LT G + KLV R C L T +L +A+ +F++ S
Sbjct: 39 LKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGT 98
Query: 70 IYLYTSSTFSLFRRMLCNSN--------PTTTRPNNFIYPHVLKSCHESRSTG---AVHA 118
++Y S LCN + P+ + +P L +C +SR+ G +H
Sbjct: 99 CFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHG 158
Query: 119 QIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVD 178
IVK G+ + VQ +LV Y A G++D
Sbjct: 159 LIVKMGYAKDLFVQNSLVHFY--------------------------------AECGELD 186
Query: 179 SALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLV 238
SA K+FDEM ER+V SW ++I G + F + + LF MV R PN VT+V
Sbjct: 187 SARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMV-----RDEEVT-PNSVTMV 240
Query: 239 CALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDK 298
C +SAC L+ G+ ++ ++ + V+ + ++LVDMY KC + +A+++F+
Sbjct: 241 CVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGAS 300
Query: 299 GLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCS 358
L N+M + + G + A+ VF M++ G VRPD ++ + +++C+ + G S
Sbjct: 301 NLDLCNAMASNYVRQGLTREALGVFNLMMDSG--VRPDRISMLSAISSCSQLRNILWGKS 358
Query: 359 YFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVY 418
+ R G E L+D+ + R D A + MS V W S+ G
Sbjct: 359 CHGYVLRN-GFESWDNICNALIDMYMKCHRQDTAFRIFDRMS-NKTVVTWNSIVAGYVEN 416
Query: 419 GRTDLAEFAAKKLLEIDPHNGGYG---IMLANVYGELGKWDEVRNVWRILKQQKSYKVPG 475
G D AA + E P I+ V G L ++E V+ ++ Q+ G
Sbjct: 417 GEVD----AAWETFETMPEKNIVSWNTIISGLVQGSL--FEEAIEVFCSMQSQEGVNADG 470
Query: 476 CSWIEIDDQVHQFFSLD 492
+ + I +LD
Sbjct: 471 VTMMSIASACGHLGALD 487
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 298 bits (763), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 148/421 (35%), Positives = 245/421 (58%), Gaps = 17/421 (4%)
Query: 95 PNNFIYPHVLKSCHESRSTGA---VHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEK 151
P+ VL S +S +H ++K G + V +A++D Y + G +
Sbjct: 250 PDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKS-GHVYGIIS 308
Query: 152 VFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPER----DVPSWNALIAGCTQNGF 207
+F++ A I+G +R G VD AL++F+ E+ +V SW ++IAGC QNG
Sbjct: 309 LFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGK 368
Query: 208 FSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFV 267
E + LFREM KPN VT+ L ACG+ + L G+ HG+ +
Sbjct: 369 DIEALELFREMQVAGV-------KPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLD 421
Query: 268 DSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMV 327
+ + ++L+DMY KCG + L++ VF M P K L WNS++N F++HG+++ +++FE ++
Sbjct: 422 NVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLM 481
Query: 328 ECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAG 387
++PD ++F LL+AC GL ++G YF+MM+ EYGI+P++EHY C+V+LLGRAG
Sbjct: 482 RT--RLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAG 539
Query: 388 RFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLAN 447
+ EA ++++ M EPD VWG+L N C++ DLAE AA+KL ++P N G ++L+N
Sbjct: 540 KLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSN 599
Query: 448 VYGELGKWDEVRNVWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLES 507
+Y G W EV ++ ++ K PGCSWI++ ++V+ + D+S P+ +++ ++
Sbjct: 600 IYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDE 659
Query: 508 L 508
+
Sbjct: 660 I 660
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 113/467 (24%), Positives = 218/467 (46%), Gaps = 65/467 (13%)
Query: 58 ARRIFDHLHSPNIYLYTSSTFSLFR-RMLCNSNPTTTR-------PNNFIYPHVLKSCHE 109
A + + P IY ++S ++L + ++ S +R P++ + P++ K C E
Sbjct: 69 ADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAE 128
Query: 110 S---RSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTA 166
+ +H +G + VQ ++ Y R G +G+A KVFD M +++VV+ +A
Sbjct: 129 LSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMR-CGRMGDARKVFDRMSDKDVVTCSA 187
Query: 167 MISGYARVGDVDSALKLFDEMP----ERDVPSWNALIAGCTQNGFFSEGIRLFREMVALA 222
++ YAR G ++ +++ EM E ++ SWN +++G ++G+ E + +F+++ L
Sbjct: 188 LLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHL- 246
Query: 223 AERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKC 282
G+ C P+ VT+ L + G + ML +G+ IHGYV K D + ++++DMYGK
Sbjct: 247 ---GF-C--PDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKS 300
Query: 283 GNL----------------------------ALARKVFEM-------NPDKGLTSWNSMI 307
G++ L K EM + + SW S+I
Sbjct: 301 GHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSII 360
Query: 308 NCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREY 367
A +G+ A+ +F +M G V+P+ VT +L AC + + G S R +
Sbjct: 361 AGCAQNGKDIEALELFREMQVAG--VKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVH 418
Query: 368 GIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTD--LAE 425
++ + L+D+ + GR + + ++V M + V W SL NG ++G+ ++
Sbjct: 419 LLD-NVHVGSALIDMYAKCGRINLS-QIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSI 476
Query: 426 FAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYK 472
F + + P + +L+ G++G DE ++++ ++ K
Sbjct: 477 FESLMRTRLKPDFISFTSLLSAC-GQVGLTDEGWKYFKMMSEEYGIK 522
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 103/249 (41%), Gaps = 41/249 (16%)
Query: 113 TGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYA 172
T HA+I+K+G + + L+ SYS Y
Sbjct: 34 TTQAHARILKSGAQNDGYISAKLIASYSN-----------------------------YN 64
Query: 173 RVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKP 232
D D L+ +P+ + S+++LI T+ F++ I +F M + P
Sbjct: 65 CFNDADLVLQ---SIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGL-------IP 114
Query: 233 NPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVF 292
+ L C S ++GK IH + +D+F+ S+ MY +CG + ARKVF
Sbjct: 115 DSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVF 174
Query: 293 EMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGL 352
+ DK + + ++++ +A G E + + +M G + + V++ G+L+ G
Sbjct: 175 DRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSG--IEANIVSWNGILSGFNRSGY 232
Query: 353 VEQGCSYFE 361
++ F+
Sbjct: 233 HKEAVVMFQ 241
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 296 bits (759), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 158/435 (36%), Positives = 258/435 (59%), Gaps = 21/435 (4%)
Query: 96 NNFIYPHVLKSCHESRS---TGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKV 152
N F + +L +C +SR H Q++ GF ++ +++D+Y++ G + +A++
Sbjct: 178 NEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAK-CGQMESAKRC 236
Query: 153 FDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGI 212
FDEM +++ +T +ISGYA++GD+++A KLF EMPE++ SW ALIAG + G + +
Sbjct: 237 FDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRAL 296
Query: 213 RLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFIS 272
LFR+M+AL KP T L A + L+ GK IHGY+ + + ++ +
Sbjct: 297 DLFRKMIALGV-------KPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVI 349
Query: 273 NSLVDMYGKCGNLALARKVFEMNPDK-GLTSWNSMINCFALHGQSEGAIAVFEQMVECGG 331
+SL+DMY K G+L + +VF + DK WN+MI+ A HG A+ + + M++
Sbjct: 350 SSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKF-- 407
Query: 332 DVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDE 391
V+P+ T V +LNAC+H GLVE+G +FE MT ++GI P EHY CL+DLLGRAG F E
Sbjct: 408 RVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKE 467
Query: 392 AMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGE 451
M + M EPD+ +W ++ C+++G +L + AA +L+++DP + I+L+++Y +
Sbjct: 468 LMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYAD 527
Query: 452 LGKWDEVRNVWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKA--EELYSVLESLI 509
GKW+ V + ++K+++ K SWIEI+ +V F D S A EE+Y +L +L
Sbjct: 528 HGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNLA 587
Query: 510 GFGNEVMIEQQALTT 524
+IE++A T
Sbjct: 588 A-----VIEEEASRT 597
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 154/352 (43%), Gaps = 46/352 (13%)
Query: 103 VLKSCHESRSTGA---VHAQIVKTGFEQ-YPIVQTALVDSYSRGLGGLGNAEKVFDEMRE 158
+L+ C +++S +H + TGF++ ++ L+ Y + G +A KVFD+M
Sbjct: 52 LLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMK-CGKPIDACKVFDQMHL 110
Query: 159 RNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREM 218
RN+ S+ M+SGY + G + A +FD MPERDV SWN ++ G Q+G E + ++E
Sbjct: 111 RNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEF 170
Query: 219 VALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDM 278
K N + L+AC + LQL + HG V F + +S S++D
Sbjct: 171 RRSGI-------KFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDA 223
Query: 279 YGKCGNLALARKVF-EMN------------------------------PDKGLTSWNSMI 307
Y KCG + A++ F EM P+K SW ++I
Sbjct: 224 YAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALI 283
Query: 308 NCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREY 367
+ G A+ +F +M+ G V+P+ TF L A + G M R
Sbjct: 284 AGYVRQGSGNRALDLFRKMIALG--VKPEQFTFSSCLCASASIASLRHGKEIHGYMIRT- 340
Query: 368 GIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYG 419
+ P L+D+ ++G + + V R + D V W ++ + +G
Sbjct: 341 NVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHG 392
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 99/233 (42%), Gaps = 38/233 (16%)
Query: 237 LVCALSACGHTSMLQLGKWIHGYVYKNDF-FVDSFISNSLVDMYGKCGN----------- 284
L L CG T L+ GKWIH ++ F ++ +SN L+ MY KCG
Sbjct: 49 LASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQM 108
Query: 285 --------------------LALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFE 324
L AR VF+ P++ + SWN+M+ +A G A+ ++
Sbjct: 109 HLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYK 168
Query: 325 QMVECGGDVRPDGVTFVGLLNACTHGGLVE-QGCSYFEMMTREYGIEPQIEHYGCLVDLL 383
+ G ++ + +F GLL AC ++ ++ +++ G + ++D
Sbjct: 169 EFRRSG--IKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLV--AGFLSNVVLSCSIIDAY 224
Query: 384 GRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDP 436
+ G+ + A M+++ D +W +L +G G + AE ++ E +P
Sbjct: 225 AKCGQMESAKRCFDEMTVK-DIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNP 276
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 296 bits (759), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 166/442 (37%), Positives = 244/442 (55%), Gaps = 19/442 (4%)
Query: 73 YTSSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCH--ESRSTGA-VHAQIVKTGFEQYP 129
Y +F +ML +S P+ F VL +C E G +H+ IV TGF+
Sbjct: 258 YDLRALDIFSKMLRDS---LLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISG 314
Query: 130 IVQTALVDSYSRGLGGLGNAEKVFDE--MRERNVVSFTAMISGYARVGDVDSALKLFDEM 187
IV AL+ YSR GG+ A ++ ++ ++ + FTA++ GY ++GD++ A +F +
Sbjct: 315 IVLNALISMYSR-CGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSL 373
Query: 188 PERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHT 247
+RDV +W A+I G Q+G + E I LFR MV +PN TL LS
Sbjct: 374 KDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGG-------QRPNSYTLAAMLSVASSL 426
Query: 248 SMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEM-NPDKGLTSWNSM 306
+ L GK IHG K+ +SN+L+ MY K GN+ A + F++ ++ SW SM
Sbjct: 427 ASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSM 486
Query: 307 INCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTRE 366
I A HG +E A+ +FE M+ G +RPD +T+VG+ +ACTH GLV QG YF+MM
Sbjct: 487 IIALAQHGHAEEALELFETMLMEG--LRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDV 544
Query: 367 YGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEF 426
I P + HY C+VDL GRAG EA E + M +EPD V WGSL + C+V+ DL +
Sbjct: 545 DKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKV 604
Query: 427 AAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVPGCSWIEIDDQVH 486
AA++LL ++P N G LAN+Y GKW+E + + +K + K G SWIE+ +VH
Sbjct: 605 AAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVH 664
Query: 487 QFFSLDQSSPKAEELYSVLESL 508
F D + P+ E+Y ++ +
Sbjct: 665 VFGVEDGTHPEKNEIYMTMKKI 686
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 133/256 (51%), Gaps = 14/256 (5%)
Query: 116 VHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVG 175
VH +++K+G + L++ YS+ G +A K+FDEM R S+ ++S Y++ G
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSK-TGYALHARKLFDEMPLRTAFSWNTVLSAYSKRG 94
Query: 176 DVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPV 235
D+DS + FD++P+RD SW +I G G + + IR+ +MV E P
Sbjct: 95 DMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIE-------PTQF 147
Query: 236 TLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMN 295
TL L++ T ++ GK +H ++ K + +SNSL++MY KCG+ +A+ VF+
Sbjct: 148 TLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRM 207
Query: 296 PDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQ 355
+ ++SWN+MI GQ + A+A FEQM E D VT+ +++ G +
Sbjct: 208 VVRDISSWNAMIALHMQVGQMDLAMAQFEQMAE------RDIVTWNSMISGFNQRGYDLR 261
Query: 356 GCSYFEMMTREYGIEP 371
F M R+ + P
Sbjct: 262 ALDIFSKMLRDSLLSP 277
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 295 bits (756), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 165/419 (39%), Positives = 243/419 (57%), Gaps = 17/419 (4%)
Query: 95 PNNFIYPHVLKSCHE----SRSTG-AVHAQIVKTGFEQ-YPIVQTALVDSYSRGLGGLGN 148
PN+ + +L C + S + G +H K G ++ + +V TA++ YS+ G
Sbjct: 69 PNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSK-RGRFKK 127
Query: 149 AEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFF 208
A VFD M ++N V++ MI GY R G VD+A K+FD+MPERD+ SW A+I G + G+
Sbjct: 128 ARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQ 187
Query: 209 SEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVD 268
E + FREM KP+ V ++ AL+AC + L G W+H YV DF +
Sbjct: 188 EEALLWFREMQISGV-------KPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNN 240
Query: 269 SFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVE 328
+SNSL+D+Y +CG + AR+VF + + SWNS+I FA +G + ++ F +M E
Sbjct: 241 VRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQE 300
Query: 329 CGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGR 388
G +PD VTF G L AC+H GLVE+G YF++M +Y I P+IEHYGCLVDL RAGR
Sbjct: 301 KG--FKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGR 358
Query: 389 FDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTD-LAEFAAKKLLEIDPHNGGYGIMLAN 447
++A+++V+ M M+P+EVV GSL C +G LAE K L +++ + ++L+N
Sbjct: 359 LEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSN 418
Query: 448 VYGELGKWDEVRNVWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLE 506
+Y GKW+ + R +K K PG S IEIDD +H F + D + + + VLE
Sbjct: 419 MYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLE 477
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 112/275 (40%), Gaps = 47/275 (17%)
Query: 194 SWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGH--TSMLQ 251
SW + I T+NG +E + F +M E PN +T + LS CG +
Sbjct: 38 SWTSRINLLTRNGRLAEAAKEFSDMTLAGVE-------PNHITFIALLSGCGDFTSGSEA 90
Query: 252 LGKWIHGYVYK------------------------------NDFFVD--SFISNSLVDMY 279
LG +HGY K D+ D S N+++D Y
Sbjct: 91 LGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGY 150
Query: 280 GKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVT 339
+ G + A K+F+ P++ L SW +MIN F G E A+ F +M G V+PD V
Sbjct: 151 MRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISG--VKPDYVA 208
Query: 340 FVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGM 399
+ LNACT+ G + G + + + L+DL R G + A +V
Sbjct: 209 IIAALNACTNLGALSFGL-WVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVF--Y 265
Query: 400 SMEPDEVV-WGSLFNGCKVYGRTDLAEFAAKKLLE 433
+ME VV W S+ G G + +K+ E
Sbjct: 266 NMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQE 300
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 295 bits (754), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 165/498 (33%), Positives = 267/498 (53%), Gaps = 24/498 (4%)
Query: 23 KQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSPNIYLYTSSTFSLFR 82
K+L H+ G + LV+ +L + AR +FD +++ + + S +
Sbjct: 155 KKLHCHVVKFGLGSNLYVQNALVKMYSLC-GLMDMARGVFDRRCKEDVFSW-NLMISGYN 212
Query: 83 RM---------LCNSNPTTTRPNNFIYPHVLKSCHESRSTG---AVHAQIVKTGFEQYPI 130
RM L P + VL +C + + VH + + E
Sbjct: 213 RMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLR 272
Query: 131 VQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPER 190
++ ALV++Y+ G + A ++F M+ R+V+S+T+++ GY G++ A FD+MP R
Sbjct: 273 LENALVNAYA-ACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVR 331
Query: 191 DVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSML 250
D SW +I G + G F+E + +FREM + P+ T+V L+AC H L
Sbjct: 332 DRISWTIMIDGYLRAGCFNESLEIFREMQSAGM-------IPDEFTMVSVLTACAHLGSL 384
Query: 251 QLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCF 310
++G+WI Y+ KN D + N+L+DMY KCG A+KVF + +W +M+
Sbjct: 385 EIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGL 444
Query: 311 ALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIE 370
A +GQ + AI VF QM + ++PD +T++G+L+AC H G+V+Q +F M ++ IE
Sbjct: 445 ANNGQGQEAIKVFFQMQDMS--IQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIE 502
Query: 371 PQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKK 430
P + HYGC+VD+LGRAG EA E++R M M P+ +VWG+L +++ +AE AAKK
Sbjct: 503 PSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKK 562
Query: 431 LLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVPGCSWIEIDDQVHQFFS 490
+LE++P NG +L N+Y +W ++R V R + K PG S IE++ H+F +
Sbjct: 563 ILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVA 622
Query: 491 LDQSSPKAEELYSVLESL 508
D+S ++EE+Y LE L
Sbjct: 623 GDKSHLQSEEIYMKLEEL 640
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 141/350 (40%), Gaps = 40/350 (11%)
Query: 75 SSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTGAVHAQIVKTGFEQYPIVQTA 134
+S S+F+ +L ++ + + + +L C + +H+Q + G P Q
Sbjct: 12 NSELSIFKALLMSTITESISNDYSRFISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKK 71
Query: 135 LVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPS 194
L + LGG V A KLF ++PE DV
Sbjct: 72 LFVFWCSRLGG------------------------------HVSYAYKLFVKIPEPDVVV 101
Query: 195 WNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGK 254
WN +I G ++ EG+RL+ M+ + G + L+ L G L GK
Sbjct: 102 WNNMIKGWSKVDCDGEGVRLYLNML----KEGVTPDSHTFPFLLNGLKRDG--GALACGK 155
Query: 255 WIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHG 314
+H +V K + ++ N+LV MY CG + +AR VF+ + + SWN MI+ +
Sbjct: 156 KLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMK 215
Query: 315 QSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIE 374
+ E +I + +M V P VT + +L+AC+ + C E EP +
Sbjct: 216 EYEESIELLVEMER--NLVSPTSVTLLLVLSACSKVK-DKDLCKRVHEYVSECKTEPSLR 272
Query: 375 HYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLA 424
LV+ G D A+ + R M D + W S+ G G LA
Sbjct: 273 LENALVNAYAACGEMDIAVRIFRSMKAR-DVISWTSIVKGYVERGNLKLA 321
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 295 bits (754), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 178/578 (30%), Positives = 295/578 (51%), Gaps = 93/578 (16%)
Query: 11 TILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSPNI 70
+++ + H LKQ+ A L LG + F KL+ + + ++ +AR++FD L P I
Sbjct: 26 SLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIH-ASSSFGDITFARQVFDDLPRPQI 84
Query: 71 YLYTSSTFSLFRR--------MLCNSNPTTTRPNNFIYPHVLKSCH---ESRSTGAVHAQ 119
+ + + R M N P++F +PH+LK+C + VHAQ
Sbjct: 85 FPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQ 144
Query: 120 IVKTGFEQYPIVQTALVDSYS--RGLG-------GLGNAEK------------------- 151
+ + GF+ VQ L+ Y+ R LG GL E+
Sbjct: 145 VFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPM 204
Query: 152 ----VFDEMRERNV----VSFTAMISG--------------------------------- 170
+F +MR+ +V V+ ++++
Sbjct: 205 EALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLN 264
Query: 171 --YARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYR 228
YA+ G V +A LFD+M ++ WNA+I+G +NG+ E I +F EM+ +
Sbjct: 265 TMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMIN-------K 317
Query: 229 CNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALA 288
+P+ +++ A+SAC L+ + ++ YV ++D+ D FIS++L+DM+ KCG++ A
Sbjct: 318 DVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGA 377
Query: 289 RKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACT 348
R VF+ D+ + W++MI + LHG++ AI+++ M E GG V P+ VTF+GLL AC
Sbjct: 378 RLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAM-ERGG-VHPNDVTFLGLLMACN 435
Query: 349 HGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVW 408
H G+V +G +F M ++ I PQ +HY C++DLLGRAG D+A EV++ M ++P VW
Sbjct: 436 HSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVW 494
Query: 409 GSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQ 468
G+L + CK + +L E+AA++L IDP N G+ + L+N+Y WD V V +K++
Sbjct: 495 GALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEK 554
Query: 469 KSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLE 506
K GCSW+E+ ++ F D+S P+ EE+ +E
Sbjct: 555 GLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVE 592
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 293 bits (751), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 149/390 (38%), Positives = 236/390 (60%), Gaps = 10/390 (2%)
Query: 126 EQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFD 185
E+ + T+++ Y + G + +AE++F+ M + V++ AMISG + G++ A ++FD
Sbjct: 231 EKTEVSWTSMLMGYVQN-GRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFD 289
Query: 186 EMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACG 245
M ER+ SW +I +NGF E + LF L ++G R P TL+ LS C
Sbjct: 290 SMKERNDASWQTVIKIHERNGFELEALDLF----ILMQKQGVR---PTFPTLISILSVCA 342
Query: 246 HTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNS 305
+ L GK +H + + F VD ++++ L+ MY KCG L ++ +F+ P K + WNS
Sbjct: 343 SLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNS 402
Query: 306 MINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTR 365
+I+ +A HG E A+ VF +M G +P+ VTFV L+AC++ G+VE+G +E M
Sbjct: 403 IISGYASHGLGEEALKVFCEM-PLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMES 461
Query: 366 EYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAE 425
+G++P HY C+VD+LGRAGRF+EAME++ M++EPD VWGSL C+ + + D+AE
Sbjct: 462 VFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAE 521
Query: 426 FAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVPGCSWIEIDDQV 485
F AKKL+EI+P N G I+L+N+Y G+W +V + +++K + K PGCSW E++++V
Sbjct: 522 FCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKV 581
Query: 486 HQFFSLD-QSSPKAEELYSVLESLIGFGNE 514
H F S P+ E + +L+ L G E
Sbjct: 582 HAFTRGGINSHPEQESILKILDELDGLLRE 611
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 124/267 (46%), Gaps = 29/267 (10%)
Query: 148 NAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGF 207
+A K+FDEM +RN++S+ ++SGY + G++D A K+FD MPER+V SW AL+ G NG
Sbjct: 66 DARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGK 125
Query: 208 FSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHG-YVYKNDFF 266
LF ++ + N V+ L LQ G+ +Y+
Sbjct: 126 VDVAESLF-----------WKMPEKNKVSWTVML-----IGFLQDGRIDDACKLYEMIPD 169
Query: 267 VDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQM 326
D+ S++ K G + AR++F+ ++ + +W +M+ + + + + A +F+ M
Sbjct: 170 KDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM 229
Query: 327 VECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRA 386
E V++ +L G +E FE+M ++P I ++ LG+
Sbjct: 230 PE------KTEVSWTSMLMGYVQNGRIEDAEELFEVMP----VKPVIA-CNAMISGLGQK 278
Query: 387 GRFDEAMEVVRGMSMEPDEVVWGSLFN 413
G +A V M E ++ W ++
Sbjct: 279 GEIAKARRVFDSMK-ERNDASWQTVIK 304
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 101/212 (47%), Gaps = 32/212 (15%)
Query: 125 FEQYP----IVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSA 180
F++ P I LV Y + G + A KVFD M ERNVVS+TA++ GY G VD A
Sbjct: 71 FDEMPDRNIISWNGLVSGYMKN-GEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVA 129
Query: 181 LKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCA 240
LF +MPE++ SW ++ G Q+G + +L+ EM+ +K N
Sbjct: 130 ESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLY-EMIP---------DKDN------- 172
Query: 241 LSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNS------LVDMYGKCGNLALARKVFEM 294
TSM+ G G V + D S +V YG+ + ARK+F++
Sbjct: 173 ---IARTSMIH-GLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDV 228
Query: 295 NPDKGLTSWNSMINCFALHGQSEGAIAVFEQM 326
P+K SW SM+ + +G+ E A +FE M
Sbjct: 229 MPEKTEVSWTSMLMGYVQNGRIEDAEELFEVM 260
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 123/294 (41%), Gaps = 62/294 (21%)
Query: 143 LGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGC 202
+G + A K+FD +++ S+ +M++GY A KLFDEMP+R++ SWN L++G
Sbjct: 30 IGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGY 89
Query: 203 TQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYK 262
+NG E ++F M P V + +A + GYV+
Sbjct: 90 MKNGEIDEARKVFDLM---------------PERNVVSWTAL-----------VKGYVHN 123
Query: 263 NDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAV 322
G + +A +F P+K SW M+ F G+ + A +
Sbjct: 124 --------------------GKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKL 163
Query: 323 FEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDL 382
+E + + D + +++ G V++ F+ M+ E + + +V
Sbjct: 164 YEMIPD------KDNIARTSMIHGLCKEGRVDEAREIFDEMS-----ERSVITWTTMVTG 212
Query: 383 LGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDP 436
G+ R D+A ++ M E EV W S+ G GR + AE +L E+ P
Sbjct: 213 YGQNNRVDDARKIFDVMP-EKTEVSWTSMLMGYVQNGRIEDAE----ELFEVMP 261
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 115/271 (42%), Gaps = 62/271 (22%)
Query: 168 ISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGY 227
I+ +R+G + A KLFD + + SWN+++AG N + +LF EM
Sbjct: 24 ITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM--------- 74
Query: 228 RCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLAL 287
P+ + W N LV Y K G +
Sbjct: 75 ----PDR----------------NIISW-----------------NGLVSGYMKNGEIDE 97
Query: 288 ARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNAC 347
ARKVF++ P++ + SW +++ + +G+ + A ++F +M E + V++ +L
Sbjct: 98 ARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPE------KNKVSWTVMLIGF 151
Query: 348 THGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVV 407
G ++ C +EM+ + I +G L + GR DEA E+ MS E +
Sbjct: 152 LQDGRIDDACKLYEMIPDKDNIARTSMIHG-----LCKEGRVDEAREIFDEMS-ERSVIT 205
Query: 408 WGSLFNGCKVYGRTDLAEFAAKKLLEIDPHN 438
W ++ G YG+ + + A+K+ ++ P
Sbjct: 206 WTTMVTG---YGQNNRVD-DARKIFDVMPEK 232
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 83/181 (45%), Gaps = 15/181 (8%)
Query: 288 ARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNAC 347
ARK+F+ PD+ + SWN +++ + +G+ + A VF+ M E + V++ L+
Sbjct: 67 ARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPE------RNVVSWTALVKGY 120
Query: 348 THGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVV 407
H G V+ S F M + + + G L D GR D+A ++ M + D +
Sbjct: 121 VHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQD-----GRIDDACKLYE-MIPDKDNIA 174
Query: 408 WGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQ 467
S+ +G GR D A + E+ + + YG+ + D+ R ++ ++ +
Sbjct: 175 RTSMIHGLCKEGRVDEAR---EIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPE 231
Query: 468 Q 468
+
Sbjct: 232 K 232
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 293 bits (751), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 178/534 (33%), Positives = 279/534 (52%), Gaps = 72/534 (13%)
Query: 4 NLNEQVLTILGKSNHLNHLKQLQAHL--TTLGHAHTDFYAFKLVRFCALTLSNLPYARRI 61
N ++++ ++ + ++ LKQL A TT + + + + + S++ YA R+
Sbjct: 46 NHHQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRV 105
Query: 62 FDHLHSPNIYLYTS-------------STFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCH 108
FD + + + +++ + F L+R+ML + P+ +P VLK+C
Sbjct: 106 FDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKML---ERGESSPDKHTFPFVLKACA 162
Query: 109 E--SRSTGA-VHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFT 165
S G VH QIVK GF GG +V
Sbjct: 163 YIFGFSEGKQVHCQIVKHGF------------------GG--------------DVYVNN 190
Query: 166 AMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAER 225
+I Y G +D A K+FDEMPER + SWN++I + G + ++LFREM
Sbjct: 191 GLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREM------- 243
Query: 226 GYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKN---DFFVDSFISNSLVDMYGKC 282
R +P+ T+ LSAC L LG W H ++ + D +D + NSL++MY KC
Sbjct: 244 -QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKC 302
Query: 283 GNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVG 342
G+L +A +VF+ + L SWN+MI FA HG++E A+ F++MV+ +VRP+ VTFVG
Sbjct: 303 GSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVG 362
Query: 343 LLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSME 402
LL AC H G V +G YF+MM R+Y IEP +EHYGC+VDL+ RAG EA+++V M M+
Sbjct: 363 LLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMK 422
Query: 403 PDEVVWGSLFNG-CKVYGRTDLAEFAAKKLLEIDPHN-------GGYGIMLANVYGELGK 454
PD V+W SL + CK +L+E A+ ++ N G ++L+ VY +
Sbjct: 423 PDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASR 482
Query: 455 WDEVRNVWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESL 508
W++V V +++ + K PGCS IEI+ H+FF+ D S P+ +++Y L+ +
Sbjct: 483 WNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVI 536
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 293 bits (750), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 138/351 (39%), Positives = 217/351 (61%), Gaps = 9/351 (2%)
Query: 158 ERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFRE 217
+ V + I+ Y + G V++ +LFDEMP + + +WNA+I+G +QNG + + L+ +
Sbjct: 188 DSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQ 247
Query: 218 MVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVD 277
M + C P+P TLV LS+C H ++G + V N F + F+SN+ +
Sbjct: 248 MKSSGV-----C--PDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASIS 300
Query: 278 MYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDG 337
MY +CGNLA AR VF++ P K L SW +MI C+ +HG E + +F+ M++ G +RPDG
Sbjct: 301 MYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRG--IRPDG 358
Query: 338 VTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVR 397
FV +L+AC+H GL ++G F M REY +EP EHY CLVDLLGRAGR DEAME +
Sbjct: 359 AVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIE 418
Query: 398 GMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDE 457
M +EPD VWG+L CK++ D+AE A K++E +P+N GY ++++N+Y + +
Sbjct: 419 SMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEG 478
Query: 458 VRNVWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESL 508
+ + +++++ K PG S++E +VH F + D+S + EE++ +L+ L
Sbjct: 479 IWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDEL 529
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 184/409 (44%), Gaps = 58/409 (14%)
Query: 75 SSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHE---SRSTGAVHAQIVKTGFEQYPIV 131
S + SL+R ML + + P+ F +P +LKSC S +H + K G E P V
Sbjct: 35 SESISLYRSML----RSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFV 90
Query: 132 QTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERD 191
TA+IS Y + G V A K+F+E P+
Sbjct: 91 --------------------------------LTALISMYCKCGLVADARKVFEENPQSS 118
Query: 192 VPS--WNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSM 249
S +NALI+G T N ++ +FR M E G + VT++ + C
Sbjct: 119 QLSVCYNALISGYTANSKVTDAAYMFRRM----KETGVSVDS---VTMLGLVPLCTVPEY 171
Query: 250 LQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINC 309
L LG+ +HG K + + NS + MY KCG++ R++F+ P KGL +WN++I+
Sbjct: 172 LWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISG 231
Query: 310 FALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGI 369
++ +G + + ++EQM G V PD T V +L++C H G + G +++ G
Sbjct: 232 YSQNGLAYDVLELYEQMKSSG--VCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESN-GF 288
Query: 370 EPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAK 429
P + + + R G +A V M ++ V W ++ ++G ++
Sbjct: 289 VPNVFVSNASISMYARCGNLAKARAVFDIMPVK-SLVSWTAMIGCYGMHGMGEIGLMLFD 347
Query: 430 KLLE--IDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKV-PG 475
+++ I P +G +M+ + G D+ ++R +K++ YK+ PG
Sbjct: 348 DMIKRGIRP-DGAVFVMVLSACSHSGLTDKGLELFRAMKRE--YKLEPG 393
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 11/156 (7%)
Query: 195 WNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGK 254
WN + FSE I L+R M+ + P+ + L +C S+ G+
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGS-------SPDAFSFPFILKSCASLSLPVSGQ 73
Query: 255 WIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTS--WNSMINCFAL 312
+H +V K + F+ +L+ MY KCG +A ARKVFE NP S +N++I+ +
Sbjct: 74 QLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTA 133
Query: 313 HGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACT 348
+ + A +F +M E G V D VT +GL+ CT
Sbjct: 134 NSKVTDAAYMFRRMKETG--VSVDSVTMLGLVPLCT 167
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 129/320 (40%), Gaps = 64/320 (20%)
Query: 95 PNNFIYPHVLKSCHE--SRSTGAVHAQIVKT-GFEQYPIVQTALVDSYSRGLGGLGNAEK 151
P+ F VL SC ++ G ++V++ GF V A + Y+R G L A
Sbjct: 255 PDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYAR-CGNLAKARA 313
Query: 152 VFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNA----LIAGCTQNGF 207
VFD M +++VS+TAMI Y G + L LFD+M +R + A +++ C+ +G
Sbjct: 314 VFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGL 373
Query: 208 FSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFV 267
+G+ LFR M +R Y+ +P P C
Sbjct: 374 TDKGLELFRAM-----KREYKL-EPGPEHYSC---------------------------- 399
Query: 268 DSFISNSLVDMYGKCGNLALARKVFE---MNPDKGLTSWNSMINCFALHGQSEGAIAVFE 324
LVD+ G+ G L A + E + PD + W +++ +H + A F
Sbjct: 400 -------LVDLLGRAGRLDEAMEFIESMPVEPDGAV--WGALLGACKIHKNVDMAELAFA 450
Query: 325 QMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQ-----IEHYGCL 379
+++E P+ + + L++ ++G +M RE + +EH G
Sbjct: 451 KVIE----FEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKG-R 505
Query: 380 VDLLGRAGRFDEAMEVVRGM 399
V L R E E V M
Sbjct: 506 VHLFLAGDRSHEQTEEVHRM 525
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 292 bits (748), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 150/387 (38%), Positives = 228/387 (58%), Gaps = 10/387 (2%)
Query: 126 EQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFD 185
E+ ++ ++ Y +G + A +FD+M R+V+S+ ++ GYA +GD+++ ++FD
Sbjct: 87 ERDIVLWNTMISGYIE-MGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFD 145
Query: 186 EMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACG 245
+MPER+V SWN LI G QNG SE + F+ MV + G PN T+ LSAC
Sbjct: 146 DMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMV----DEGSVV--PNDATMTLVLSACA 199
Query: 246 HTSMLQLGKWIHGYVYKNDF-FVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWN 304
GKW+H Y + VD + N+L+DMYGKCG + +A +VF+ + L SWN
Sbjct: 200 KLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWN 259
Query: 305 SMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMT 364
+MIN A HG A+ +F +M G + PD VTFVG+L AC H GLVE G +YF M
Sbjct: 260 TMINGLAAHGHGTEALNLFHEMKNSG--ISPDKVTFVGVLCACKHMGLVEDGLAYFNSMF 317
Query: 365 REYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLA 424
++ I P+IEH GC+VDLL RAG +A+E + M ++ D V+W +L KVY + D+
Sbjct: 318 TDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIG 377
Query: 425 EFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVPGCSWIEIDDQ 484
E A ++L++++P N +ML+N+YG+ G++D+ + ++ K G SWIE DD
Sbjct: 378 EVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDG 437
Query: 485 VHQFFSLDQSSPKAEELYSVLESLIGF 511
+ +F+S + P+ EEL +L L F
Sbjct: 438 LVKFYSSGEKHPRTEELQRILRELKSF 464
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 128/282 (45%), Gaps = 58/282 (20%)
Query: 143 LGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGC 202
+G + +A KVF EM E+NVV +T+MI+GY D+ SA + FD PERD+ WN +I+G
Sbjct: 41 MGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGY 100
Query: 203 TQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYK 262
+ G E LF +M P V + W
Sbjct: 101 IEMGNMLEARSLFDQM---------------PCRDVMS--------------W------- 124
Query: 263 NDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAV 322
N++++ Y G++ +VF+ P++ + SWN +I +A +G+ +
Sbjct: 125 ----------NTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGS 174
Query: 323 FEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGI-----EPQIEHYG 377
F++MV+ G V P+ T +L+AC G + F +YG + +
Sbjct: 175 FKRMVD-EGSVVPNDATMTLVLSACAKLGAFD-----FGKWVHKYGETLGYNKVDVNVKN 228
Query: 378 CLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYG 419
L+D+ G+ G + AMEV +G+ D + W ++ NG +G
Sbjct: 229 ALIDMYGKCGAIEIAMEVFKGIK-RRDLISWNTMINGLAAHG 269
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 292 bits (747), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 162/444 (36%), Positives = 246/444 (55%), Gaps = 51/444 (11%)
Query: 95 PNNFIYPHVLKSCHESRSTGAVHAQIVKTGFEQYPIVQTA----LVDSYSRGLGGLGNAE 150
P+ F Y +++ SC+ V+ + ++ F++ P A ++ Y+R G + A
Sbjct: 122 PDTFSY-NIMLSCY----VRNVNFEKAQSFFDRMPFKDAASWNTMITGYARR-GEMEKAR 175
Query: 151 KVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVP----------------- 193
++F M E+N VS+ AMISGY GD++ A F P R V
Sbjct: 176 ELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVEL 235
Query: 194 ---------------SWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLV 238
+WNA+I+G +N +G++LFR M+ E G R PN L
Sbjct: 236 AEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAML----EEGIR---PNSSGLS 288
Query: 239 CALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDK 298
AL C S LQLG+ IH V K+ D SL+ MY KCG L A K+FE+ K
Sbjct: 289 SALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKK 348
Query: 299 GLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCS 358
+ +WN+MI+ +A HG ++ A+ +F +M++ +RPD +TFV +L AC H GLV G +
Sbjct: 349 DVVAWNAMISGYAQHGNADKALCLFREMID--NKIRPDWITFVAVLLACNHAGLVNIGMA 406
Query: 359 YFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVY 418
YFE M R+Y +EPQ +HY C+VDLLGRAG+ +EA++++R M P V+G+L C+V+
Sbjct: 407 YFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVH 466
Query: 419 GRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVPGCSW 478
+LAEFAA+KLL+++ N + LAN+Y +W++V V + +K+ KVPG SW
Sbjct: 467 KNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSW 526
Query: 479 IEIDDQVHQFFSLDQSSPKAEELY 502
IEI ++VH F S D+ P+ + ++
Sbjct: 527 IEIRNKVHHFRSSDRIHPELDSIH 550
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 132/296 (44%), Gaps = 20/296 (6%)
Query: 130 IVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPE 189
I +L+ S+ + A ++FDE+ E + S+ M+S Y R + + A FD MP
Sbjct: 93 ITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPF 152
Query: 190 RDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSM 249
+D SWN +I G + G + LF M+ + N V+ +S G+
Sbjct: 153 KDAASWNTMITGYARRGEMEKARELFYSMM-----------EKNEVSWNAMIS--GYIEC 199
Query: 250 LQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVF-EMNPDKGLTSWNSMIN 308
L K H + V ++ +++ Y K + LA +F +M +K L +WN+MI+
Sbjct: 200 GDLEKASHFFKVAPVRGVVAW--TAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMIS 257
Query: 309 CFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYG 368
+ + + E + +F M+E G +RP+ L C+ ++ G +++++
Sbjct: 258 GYVENSRPEDGLKLFRAMLEEG--IRPNSSGLSSALLGCSELSALQLGRQIHQIVSKS-T 314
Query: 369 IEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLA 424
+ + L+ + + G +A ++ M + D V W ++ +G +G D A
Sbjct: 315 LCNDVTALTSLISMYCKCGELGDAWKLFEVMK-KKDVVAWNAMISGYAQHGNADKA 369
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 292 bits (747), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 168/517 (32%), Positives = 273/517 (52%), Gaps = 63/517 (12%)
Query: 10 LTILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFC--ALTLSNLPYARRIFDHLHS 67
+ ++ K N L L Q+QA+ H + KL+ FC + T S++ YAR +F+ +
Sbjct: 33 ILLISKCNSLRELMQIQAYAIK-SHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSE 91
Query: 68 PNIYLYTS------------STFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTG- 114
P+I ++ S FSLF +L + P+N+ +P +LK+C +++
Sbjct: 92 PDIVIFNSMARGYSRFTNPLEVFSLFVEILEDG----ILPDNYTFPSLLKACAVAKALEE 147
Query: 115 --AVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYA 172
+H +K G + NV +I+ Y
Sbjct: 148 GRQLHCLSMKLGLDD--------------------------------NVYVCPTLINMYT 175
Query: 173 RVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKP 232
DVDSA +FD + E V +NA+I G + +E + LFREM + KP
Sbjct: 176 ECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQG-------KYLKP 228
Query: 233 NPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVF 292
N +TL+ LS+C L LGKWIH Y K+ F ++ +L+DM+ KCG+L A +F
Sbjct: 229 NEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIF 288
Query: 293 EMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGL 352
E K +W++MI +A HG++E ++ +FE+M +V+PD +TF+GLLNAC+H G
Sbjct: 289 EKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMR--SENVQPDEITFLGLLNACSHTGR 346
Query: 353 VEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLF 412
VE+G YF M ++GI P I+HYG +VDLL RAG ++A E + + + P ++W L
Sbjct: 347 VEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILL 406
Query: 413 NGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYK 472
C + DLAE ++++ E+D +GG ++L+N+Y KW+ V ++ +++K +K+ K
Sbjct: 407 AACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVK 466
Query: 473 VPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESLI 509
VPGCS IE+++ VH+FFS D +L+ L+ ++
Sbjct: 467 VPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMV 503
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 291 bits (746), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 147/395 (37%), Positives = 235/395 (59%), Gaps = 16/395 (4%)
Query: 125 FEQYP-----IVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDS 179
F+Q P ++ A++D + + G + +A ++FDEM + V+++T MI GY + D+D+
Sbjct: 167 FDQMPHVKDVVIYNAMMDGFVKS-GDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDA 225
Query: 180 ALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVC 239
A KLFD MPER++ SWN +I G QN EGIRLF+EM A + P+ VT++
Sbjct: 226 ARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSL------DPDDVTILS 279
Query: 240 ALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKG 299
L A T L LG+W H +V + + +++DMY KCG + A+++F+ P+K
Sbjct: 280 VLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQ 339
Query: 300 LTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSY 359
+ SWN+MI+ +AL+G + A+ +F M+ + +PD +T + ++ AC HGGLVE+G +
Sbjct: 340 VASWNAMIHGYALNGNARAALDLFVTMM---IEEKPDEITMLAVITACNHGGLVEEGRKW 396
Query: 360 FEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYG 419
F +M RE G+ +IEHYGC+VDLLGRAG EA +++ M EP+ ++ S + C Y
Sbjct: 397 FHVM-REMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYK 455
Query: 420 RTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVPGCSWI 479
+ AE KK +E++P N G ++L N+Y +WD+ V ++++ ++ K GCS I
Sbjct: 456 DIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLI 515
Query: 480 EIDDQVHQFFSLDQSSPKAEELYSVLESLIGFGNE 514
EI+ V +F S D + P ++ VL L+ NE
Sbjct: 516 EINYIVSEFISGDTTHPHRRSIHLVLGDLLMHMNE 550
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 111/259 (42%), Gaps = 20/259 (7%)
Query: 158 ERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSW-NALIAGCTQNGFFSEGIRLFR 216
E NV FT + A + A KLFD+ P+RD N++I + + + L+R
Sbjct: 7 ETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYR 66
Query: 217 EMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLV 276
++ R C P+ T +C + + G +H +++ F D ++S +V
Sbjct: 67 DL------RKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVV 120
Query: 277 DMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPD 336
DMY K G + AR F+ P + SW ++I+ + G+ + A +F+QM D
Sbjct: 121 DMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHV-----KD 175
Query: 337 GVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIE-PQIEHYGCLVDLLGRAGRFDEAMEV 395
V + +++ G + F+ MT + I + H C + + A + +AM
Sbjct: 176 VVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMP- 234
Query: 396 VRGMSMEPDEVVWGSLFNG 414
E + V W ++ G
Sbjct: 235 ------ERNLVSWNTMIGG 247
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 291 bits (746), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 177/534 (33%), Positives = 282/534 (52%), Gaps = 67/534 (12%)
Query: 17 NHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSN-LPYARRIFDHLHSPNIY---- 71
++ LKQ+ A + G +L+ +L++ L YA ++FD + P++
Sbjct: 23 KNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNH 82
Query: 72 --------LYTSSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCH--ESRSTG-AVHAQI 120
+ T SL+ M P+ + + VLK+C E RS G A H ++
Sbjct: 83 VLRGSAQSMKPEKTVSLYTEM----EKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKV 138
Query: 121 VKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSA 180
V+ GF V+ AL+ + G LG A ++FD+ + + V++++M SGYA+ G +D A
Sbjct: 139 VRHGFVLNEYVKNALI-LFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEA 197
Query: 181 LKLFDEMP-------------------------------ERDVPSWNALIAGCTQNGFFS 209
++LFDEMP E+DV +WNA+I+G G+
Sbjct: 198 MRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPK 257
Query: 210 EGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYK-----ND 264
E + +F+EM A E P+ VT++ LSAC L+ GK +H Y+ + +
Sbjct: 258 EALGIFKEMRD-AGEH------PDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSS 310
Query: 265 FFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFE 324
+V + I N+L+DMY KCG++ A +VF D+ L++WN++I ALH +EG+I +FE
Sbjct: 311 IYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFE 369
Query: 325 QMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLG 384
+M V P+ VTF+G++ AC+H G V++G YF +M Y IEP I+HYGC+VD+LG
Sbjct: 370 EMQRL--KVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLG 427
Query: 385 RAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIM 444
RAG+ +EA V M +EP+ +VW +L CK+YG +L ++A +KLL + G ++
Sbjct: 428 RAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVL 487
Query: 445 LANVYGELGKWDEVRNVWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKA 498
L+N+Y G+WD V+ V ++ + K G S IE DD L S P++
Sbjct: 488 LSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIEEDDDKLMMRYLLSSEPES 541
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 93/412 (22%), Positives = 175/412 (42%), Gaps = 44/412 (10%)
Query: 91 TTTRPNNFIYPHVLKSCHESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGL-GGLGNA 149
T R N P + ++C R+ +HA +V G V L+ S S + G L A
Sbjct: 6 TNDRTTNRRRPKLWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYA 65
Query: 150 EKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVP----SWNALIAGCTQN 205
K+FDE+ + +V ++ G A+ + + L+ EM +R V ++ ++ C++
Sbjct: 66 HKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKL 125
Query: 206 GFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSM-------------LQL 252
+ S G ++V G+ N+ L+ + CG + +
Sbjct: 126 EWRSNGFAFHGKVV----RHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAW 181
Query: 253 GKWIHGYVYKNDF-----------FVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLT 301
GY + + D N ++ KC + AR++F+ +K +
Sbjct: 182 SSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVV 241
Query: 302 SWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQG----C 357
+WN+MI+ + G + A+ +F++M + G PD VT + LL+AC G +E G
Sbjct: 242 TWNAMISGYVNCGYPKEALGIFKEMRDAGE--HPDVVTILSLLSACAVLGDLETGKRLHI 299
Query: 358 SYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKV 417
E + I + L+D+ + G D A+EV RG+ + D W +L G +
Sbjct: 300 YILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVK-DRDLSTWNTLIVGLAL 358
Query: 418 -YGRTDLAEFAAKKLLEIDPHNGGY-GIMLANVYGELGKWDEVRNVWRILKQ 467
+ + F + L++ P+ + G++LA + G+ DE R + +++
Sbjct: 359 HHAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHS--GRVDEGRKYFSLMRD 408
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 291 bits (745), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 162/491 (32%), Positives = 267/491 (54%), Gaps = 30/491 (6%)
Query: 5 LNEQVLTILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDH 64
+ ++L +L N L ++ AHL ++ + C +LSN YA R+F H
Sbjct: 3 IERKLLRLLHGHNTRTRLPEIHAHLLRHFLHGSNLLLAHFISICG-SLSNSDYANRVFSH 61
Query: 65 LHSPNIYLYTS------------STFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCH---E 109
+ +PN+ ++ + + S F M + + Y +LKSC +
Sbjct: 62 IQNPNVLVFNAMIKCYSLVGPPLESLSFFSSM----KSRGIWADEYTYAPLLKSCSSLSD 117
Query: 110 SRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMIS 169
R VH ++++TGF + ++ +V+ Y+ G G +G+A+KVFDEM ERNVV + MI
Sbjct: 118 LRFGKCVHGELIRTGFHRLGKIRIGVVELYTSG-GRMGDAQKVFDEMSERNVVVWNLMIR 176
Query: 170 GYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRC 229
G+ GDV+ L LF +M ER + SWN++I+ ++ G E + LF EM+ ++G+
Sbjct: 177 GFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMI----DQGF-- 230
Query: 230 NKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSF-ISNSLVDMYGKCGNLALA 288
P+ T+V L +L GKWIH + F D + N+LVD Y K G+L A
Sbjct: 231 -DPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAA 289
Query: 289 RKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACT 348
+F + + SWN++I+ A++G+ E I +F+ M+E G V P+ TF+G+L C+
Sbjct: 290 TAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIE-EGKVAPNEATFLGVLACCS 348
Query: 349 HGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVW 408
+ G VE+G F +M + +E + EHYG +VDL+ R+GR EA + ++ M + + +W
Sbjct: 349 YTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMW 408
Query: 409 GSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQ 468
GSL + C+ +G LAE AA +L++I+P N G ++L+N+Y E G+W +V V ++K+
Sbjct: 409 GSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKN 468
Query: 469 KSYKVPGCSWI 479
+ K G S I
Sbjct: 469 RLRKSTGQSTI 479
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 137/345 (39%), Positives = 217/345 (62%), Gaps = 8/345 (2%)
Query: 166 AMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAER 225
A+I YA+ G ++ A ++F+ + +RD+ SWN++I C Q+ S I +FR+M +
Sbjct: 481 AVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGV--SGI 538
Query: 226 GYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNL 285
Y C V++ ALSAC + GK IHG++ K+ D + ++L+DMY KCGNL
Sbjct: 539 CYDC-----VSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNL 593
Query: 286 ALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLN 345
A VF+ +K + SWNS+I HG+ + ++ +F +MVE G +RPD +TF+ +++
Sbjct: 594 KAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSG-IRPDQITFLEIIS 652
Query: 346 ACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDE 405
+C H G V++G +F MT +YGI+PQ EHY C+VDL GRAGR EA E V+ M PD
Sbjct: 653 SCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDA 712
Query: 406 VVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRIL 465
VWG+L C+++ +LAE A+ KL+++DP N GY ++++N + +W+ V V ++
Sbjct: 713 GVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLM 772
Query: 466 KQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESLIG 510
K+++ K+PG SWIEI+ + H F S D + P++ +YS+L SL+G
Sbjct: 773 KEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLG 817
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 120/256 (46%), Gaps = 11/256 (4%)
Query: 165 TAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAE 224
+A+I Y + V A +F + DV + A+I+G NG + + + +FR +V +
Sbjct: 379 SALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKIS 438
Query: 225 RGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGN 284
PN +TLV L G L+LG+ +HG++ K F I +++DMY KCG
Sbjct: 439 -------PNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGR 491
Query: 285 LALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLL 344
+ LA ++FE + + SWNSMI A AI +F QM G + D V+ L
Sbjct: 492 MNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSG--ICYDCVSISAAL 549
Query: 345 NACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPD 404
+AC + G + M + + + + L+D+ + G AM V + M E +
Sbjct: 550 SACANLPSESFGKAIHGFMIK-HSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK-EKN 607
Query: 405 EVVWGSLFNGCKVYGR 420
V W S+ C +G+
Sbjct: 608 IVSWNSIIAACGNHGK 623
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 121/279 (43%), Gaps = 35/279 (12%)
Query: 165 TAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAE 224
+++I Y G +D KLFD + ++D WN ++ G + G I+ F M
Sbjct: 177 SSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVM------ 230
Query: 225 RGYRCNK--PNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKC 282
R ++ PN VT C LS C ++ LG +HG V + + I NSL+ MY KC
Sbjct: 231 ---RMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKC 287
Query: 283 GNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVG 342
G A K+F M +WN MI+ + G E ++ F +M+ G V PD +TF
Sbjct: 288 GRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSG--VLPDAITFSS 345
Query: 343 LLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSME 402
LL + S FE + I I + +D+ + D + RG+SM
Sbjct: 346 LLPS----------VSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFK-CRGVSMA 394
Query: 403 PDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGY 441
+ +F+ C D+ F A ++ HNG Y
Sbjct: 395 QN------IFSQC---NSVDVVVFTA--MISGYLHNGLY 422
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 123/262 (46%), Gaps = 35/262 (13%)
Query: 166 AMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAER 225
+++S Y++ G D A KLF M D +WN +I+G Q+G E + F EM++
Sbjct: 279 SLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGV-- 336
Query: 226 GYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNL 285
P+ +T L + L+ K IH Y+ ++ +D F++++L+D Y KC +
Sbjct: 337 -----LPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGV 391
Query: 286 ALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLN 345
++A+ +F + + +MI+ + +G ++ +F +V+ + P+ +T V +L
Sbjct: 392 SMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKV--KISPNEITLVSILP 449
Query: 346 AC-----------THGGLVEQGCSYFEMMTREYGIEPQIEHYGC-LVDLLGRAGRFDEAM 393
HG ++++G F+ + GC ++D+ + GR + A
Sbjct: 450 VIGILLALKLGRELHGFIIKKG---FDNRC----------NIGCAVIDMYAKCGRMNLAY 496
Query: 394 EVVRGMSMEPDEVVWGSLFNGC 415
E+ +S + D V W S+ C
Sbjct: 497 EIFERLS-KRDIVSWNSMITRC 517
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 107/246 (43%), Gaps = 13/246 (5%)
Query: 171 YARVGDVDSALKLFDEMPER--DVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYR 228
YA G K+F + R + WN++I+ +NG ++ + + +M+
Sbjct: 80 YAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVS---- 135
Query: 229 CNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALA 288
P+ T C + AC + ++ V + F+++SL+ Y + G + +
Sbjct: 136 ---PDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVP 192
Query: 289 RKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACT 348
K+F+ K WN M+N +A G + I F M + P+ VTF +L+ C
Sbjct: 193 SKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRM--DQISPNAVTFDCVLSVCA 250
Query: 349 HGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVW 408
L++ G ++ G++ + L+ + + GRFD+A ++ R MS D V W
Sbjct: 251 SKLLIDLGVQLHGLVVVS-GVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMS-RADTVTW 308
Query: 409 GSLFNG 414
+ +G
Sbjct: 309 NCMISG 314
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 22/169 (13%)
Query: 160 NVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMV 219
+V S + +I YA+ G++ +A+ +F M E+++ SWN++IA C +G + + LF EMV
Sbjct: 576 DVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMV 635
Query: 220 ALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNS----- 274
+ R P+ +T + +S+C H +G G + D I
Sbjct: 636 EKSGIR------PDQITFLEIISSCCH-----VGDVDEGVRFFRSMTEDYGIQPQQEHYA 684
Query: 275 -LVDMYGKCGNLALAR---KVFEMNPDKGLTSWNSMINCFALHGQSEGA 319
+VD++G+ G L A K PD G+ W +++ LH E A
Sbjct: 685 CVVDLFGRAGRLTEAYETVKSMPFPPDAGV--WGTLLGACRLHKNVELA 731
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 102/223 (45%), Gaps = 8/223 (3%)
Query: 234 PVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVF- 292
P L L AC + ++L+ GK +H ++ N DS+ ++ MY CG+ + K+F
Sbjct: 35 PRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFY 94
Query: 293 EMNPDK-GLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGG 351
++ + + WNS+I+ F +G A+A + +M+ C G V PD TF L+ AC
Sbjct: 95 RLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKML-CFG-VSPDVSTFPCLVKACVALK 152
Query: 352 LVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSL 411
+G + G++ L+ G+ D ++ + ++ D V+W +
Sbjct: 153 NF-KGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRV-LQKDCVIWNVM 210
Query: 412 FNGCKVYGRTD--LAEFAAKKLLEIDPHNGGYGIMLANVYGEL 452
NG G D + F+ ++ +I P+ + +L+ +L
Sbjct: 211 LNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKL 253
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 6/109 (5%)
Query: 115 AVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARV 174
A+H ++K ++ L+D Y++ G L A VF M+E+N+VS+ ++I+
Sbjct: 563 AIHGFMIKHSLASDVYSESTLIDMYAK-CGNLKAAMNVFKTMKEKNIVSWNSIIAACGNH 621
Query: 175 GDVDSALKLFDEMPER-----DVPSWNALIAGCTQNGFFSEGIRLFREM 218
G + +L LF EM E+ D ++ +I+ C G EG+R FR M
Sbjct: 622 GKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSM 670
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 290 bits (741), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 169/503 (33%), Positives = 267/503 (53%), Gaps = 59/503 (11%)
Query: 51 TLSNLPYARRIFDHLHSPNIYLYTS------------STFSLFRRMLCNSNPTTTRPNNF 98
+ L A + PN+++Y + + L+ RML +S P+++
Sbjct: 817 SFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDS----VSPSSY 872
Query: 99 IYPHVLK-SCHESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMR 157
Y ++K S SR ++ A I K GF + +QT L+D YS G + A KVFDEM
Sbjct: 873 TYSSLVKASSFASRFGESLQAHIWKFGFGFHVKIQTTLIDFYS-ATGRIREARKVFDEMP 931
Query: 158 ERNVVSFTAMISGYARVGDVDS-------------------------------ALKLFDE 186
ER+ +++T M+S Y RV D+DS A LF++
Sbjct: 932 ERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQ 991
Query: 187 MPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGH 246
MP +D+ SW +I G +QN + E I +F +M+ E G P+ VT+ +SAC H
Sbjct: 992 MPVKDIISWTTMIKGYSQNKRYREAIAVFYKMM----EEGI---IPDEVTMSTVISACAH 1044
Query: 247 TSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSM 306
+L++GK +H Y +N F +D +I ++LVDMY KCG+L A VF P K L WNS+
Sbjct: 1045 LGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSI 1104
Query: 307 INCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTRE 366
I A HG ++ A+ +F +M V+P+ VTFV + ACTH GLV++G + M +
Sbjct: 1105 IEGLAAHGFAQEALKMFAKMEM--ESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDD 1162
Query: 367 YGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEF 426
Y I +EHYG +V L +AG EA+E++ M EP+ V+WG+L +GC+++ +AE
Sbjct: 1163 YSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEI 1222
Query: 427 AAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKV-PGCSWIEIDDQV 485
A KL+ ++P N GY +L ++Y E +W +V + +++ K+ PG S I ID +
Sbjct: 1223 AFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRD 1282
Query: 486 HQFFSLDQSSPKAEELYSVLESL 508
H F + D+S ++E+ +L+ +
Sbjct: 1283 HLFAAADKSHSASDEVCLLLDEI 1305
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 289 bits (740), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 149/383 (38%), Positives = 231/383 (60%), Gaps = 10/383 (2%)
Query: 126 EQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFD 185
E+ + A++ Y +G + A+++FD M RNV ++ MI+GYA+ G + A LFD
Sbjct: 309 ERNEVSWNAMLAGYVQG-ERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFD 367
Query: 186 EMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACG 245
+MP+RD SW A+IAG +Q+G E +RLF +M G R N+ + ALS C
Sbjct: 368 KMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQM----EREGGRLNRS---SFSSALSTCA 420
Query: 246 HTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNS 305
L+LGK +HG + K + F+ N+L+ MY KCG++ A +F+ K + SWN+
Sbjct: 421 DVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNT 480
Query: 306 MINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTR 365
MI ++ HG E A+ FE M G ++PD T V +L+AC+H GLV++G YF MT+
Sbjct: 481 MIAGYSRHGFGEVALRFFESMKREG--LKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQ 538
Query: 366 EYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAE 425
+YG+ P +HY C+VDLLGRAG ++A +++ M EPD +WG+L +V+G T+LAE
Sbjct: 539 DYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAE 598
Query: 426 FAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVPGCSWIEIDDQV 485
AA K+ ++P N G ++L+N+Y G+W +V + ++ + KVPG SWIEI ++
Sbjct: 599 TAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKT 658
Query: 486 HQFFSLDQSSPKAEELYSVLESL 508
H F D+ P+ +E+++ LE L
Sbjct: 659 HTFSVGDEFHPEKDEIFAFLEEL 681
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 151/347 (43%), Gaps = 59/347 (17%)
Query: 125 FEQYP----IVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSA 180
F++ P + ++ Y R G A K+FDEM ER++VS+ MI GY R ++ A
Sbjct: 87 FKRMPRWSSVSYNGMISGYLRN-GEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKA 145
Query: 181 LKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCA 240
+LF+ MPERDV SWN +++G QNG + +F M + N V+
Sbjct: 146 RELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMP-----------EKNDVSWNAL 194
Query: 241 LSACGHTSMLQ-------------LGKW---IHGYVYKNDF-----FVDSF-----IS-N 273
LSA S ++ L W + G+V K F DS +S N
Sbjct: 195 LSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWN 254
Query: 274 SLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDV 333
+++ Y + G + AR++F+ +P + + +W +M++ + + E A +F++M E
Sbjct: 255 TIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPE----- 309
Query: 334 RPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAM 393
+ V++ +L G +E F++M + + ++ + G+ EA
Sbjct: 310 -RNEVSWNAMLAGYVQGERMEMAKELFDVMPCR-----NVSTWNTMITGYAQCGKISEAK 363
Query: 394 EVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGG 440
+ M + D V W ++ G G + F A +L GG
Sbjct: 364 NLFDKMP-KRDPVSWAAMIAGYSQSGHS----FEALRLFVQMEREGG 405
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 132/306 (43%), Gaps = 72/306 (23%)
Query: 131 VQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPER 190
QT + S ++ L G+++ ++E NV IS Y R G + AL++F MP
Sbjct: 44 TQTQIQKSQTKPLLKCGDSD-----IKEWNVA-----ISSYMRTGRCNEALRVFKRMPRW 93
Query: 191 DVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSML 250
S+N +I+G +NG F +LF EM ER
Sbjct: 94 SSVSYNGMISGYLRNGEFELARKLFDEM----PER------------------------- 124
Query: 251 QLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCF 310
L W N ++ Y + NL AR++FE+ P++ + SWN+M++ +
Sbjct: 125 DLVSW-----------------NVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGY 167
Query: 311 ALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIE 370
A +G + A +VF++M E + V++ LL+A +E+ C F+ +RE
Sbjct: 168 AQNGCVDDARSVFDRMPE------KNDVSWNALLSAYVQNSKMEEACMLFK--SRE---N 216
Query: 371 PQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKK 430
+ + CL+ + + EA + M++ D V W ++ G G+ D A++
Sbjct: 217 WALVSWNCLLGGFVKKKKIVEARQFFDSMNVR-DVVSWNTIITGYAQSGKID----EARQ 271
Query: 431 LLEIDP 436
L + P
Sbjct: 272 LFDESP 277
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 289 bits (740), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 141/343 (41%), Positives = 213/343 (62%), Gaps = 8/343 (2%)
Query: 166 AMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAER 225
A++ YA++G VDSA +F+ +P DV SWN +I+G QNGF SE I EM + E
Sbjct: 389 AVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAI----EMYNIMEEE 444
Query: 226 GYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNL 285
G N T V L AC L+ G +HG + KN ++D F+ SL DMYGKCG L
Sbjct: 445 GEIA--ANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRL 502
Query: 286 ALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLN 345
A +F P WN++I C HG E A+ +F++M++ G V+PD +TFV LL+
Sbjct: 503 EDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEG--VKPDHITFVTLLS 560
Query: 346 ACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDE 405
AC+H GLV++G FEMM +YGI P ++HYGC+VD+ GRAG+ + A++ ++ MS++PD
Sbjct: 561 ACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDA 620
Query: 406 VVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRIL 465
+WG+L + C+V+G DL + A++ L E++P + GY ++L+N+Y GKW+ V + I
Sbjct: 621 SIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIA 680
Query: 466 KQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESL 508
+ K PG S +E+D++V F++ +Q+ P EE+Y L +L
Sbjct: 681 HGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTAL 723
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 112/421 (26%), Positives = 175/421 (41%), Gaps = 64/421 (15%)
Query: 7 EQVLTILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVR-FCALTLSNLPYARRIFDHL 65
+ V T+ +L K L A L + KLV +C L N+ AR FDH+
Sbjct: 55 DDVHTLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYC--YLGNVALARHTFDHI 112
Query: 66 HSPNIYLY------------TSSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRST 113
+ ++Y + +S F + +S T P+ +P VLK+C
Sbjct: 113 QNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLT---PDYRTFPSVLKACRTVIDG 169
Query: 114 GAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYAR 173
+H +K GF V +L+ YSR Y
Sbjct: 170 NKIHCLALKFGFMWDVYVAASLIHLYSR-----------------------------YKA 200
Query: 174 VGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPN 233
VG+ A LFDEMP RD+ SWNA+I+G Q+G E + L + A+ +
Sbjct: 201 VGN---ARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM-----------D 246
Query: 234 PVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFE 293
VT+V LSAC G IH Y K+ + F+SN L+D+Y + G L +KVF+
Sbjct: 247 SVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFD 306
Query: 294 MNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLV 353
+ L SWNS+I + L+ Q AI++F++M ++PD +T + L + + G +
Sbjct: 307 RMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRL--SRIQPDCLTLISLASILSQLGDI 364
Query: 354 EQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFN 413
S R+ I +V + + G D A V + D + W ++ +
Sbjct: 365 RACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP-NTDVISWNTIIS 423
Query: 414 G 414
G
Sbjct: 424 G 424
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 140/305 (45%), Gaps = 20/305 (6%)
Query: 159 RNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREM 218
+NV +++ Y +G+V A FD + RDV +WN +I+G + G SE IR F
Sbjct: 84 QNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLF 143
Query: 219 VALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDM 278
+ + P+ T L AC + G IH K F D +++ SL+ +
Sbjct: 144 MLSSGL------TPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHL 194
Query: 279 YGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGV 338
Y + + AR +F+ P + + SWN+MI+ + G ++ A+ + G D V
Sbjct: 195 YSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL------SNGLRAMDSV 248
Query: 339 TFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRG 398
T V LL+ACT G +G + + ++G+E ++ L+DL GR + +V
Sbjct: 249 TVVSLLSACTEAGDFNRGVT-IHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDR 307
Query: 399 MSMEPDEVVWGSLFNGCKVYGR--TDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWD 456
M + D + W S+ ++ + ++ F +L I P + I LA++ +LG
Sbjct: 308 MYVR-DLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQP-DCLTLISLASILSQLGDIR 365
Query: 457 EVRNV 461
R+V
Sbjct: 366 ACRSV 370
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 95/191 (49%), Gaps = 19/191 (9%)
Query: 160 NVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMV 219
+V T++ Y + G ++ AL LF ++P + WN LIA +G + + LF+EM+
Sbjct: 485 DVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEML 544
Query: 220 ALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISN--SLVD 277
+ G KP+ +T V LSAC H+ ++ G+W + + D+ + + + +VD
Sbjct: 545 ----DEGV---KPDHITFVTLLSACSHSGLVDEGQWCFE-MMQTDYGITPSLKHYGCMVD 596
Query: 278 MYGKCGNLALARKVFE---MNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVR 334
MYG+ G L A K + + PD + W ++++ +HG + E + E V
Sbjct: 597 MYGRAGQLETALKFIKSMSLQPDASI--WGALLSACRVHGNVDLGKIASEHLFE----VE 650
Query: 335 PDGVTFVGLLN 345
P+ V + LL+
Sbjct: 651 PEHVGYHVLLS 661
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 288 bits (737), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 164/511 (32%), Positives = 276/511 (54%), Gaps = 62/511 (12%)
Query: 19 LNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLP---YARRIFDHLHSP-NIYLYT 74
+ L+Q+ A G + +D K + F ++L + P YA ++F + P N++++
Sbjct: 30 ITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWN 89
Query: 75 S------------STFSLFRRMLCNSNPTTTRPNNFIYPHVLKSC---HESRSTGAVHAQ 119
+ S FSL+R M + P+ YP ++K+ + R +H+
Sbjct: 90 TLIRGYAEIGNSISAFSLYREMRVSG---LVEPDTHTYPFLIKAVTTMADVRLGETIHSV 146
Query: 120 IVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDS 179
++++GF VQ +L+ Y A GDV S
Sbjct: 147 VIRSGFGSLIYVQNSLLHLY--------------------------------ANCGDVAS 174
Query: 180 ALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVC 239
A K+FD+MPE+D+ +WN++I G +NG E + L+ EM + KP+ T+V
Sbjct: 175 AYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM-------NSKGIKPDGFTIVS 227
Query: 240 ALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKG 299
LSAC L LGK +H Y+ K + SN L+D+Y +CG + A+ +F+ DK
Sbjct: 228 LLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKN 287
Query: 300 LTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSY 359
SW S+I A++G + AI +F+ M G + P +TFVG+L AC+H G+V++G Y
Sbjct: 288 SVSWTSLIVGLAVNGFGKEAIELFKYMESTEG-LLPCEITFVGILYACSHCGMVKEGFEY 346
Query: 360 FEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYG 419
F M EY IEP+IEH+GC+VDLL RAG+ +A E ++ M M+P+ V+W +L C V+G
Sbjct: 347 FRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 406
Query: 420 RTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVPGCSWI 479
+DLAEFA ++L+++P++ G ++L+N+Y +W +V+ + + + + KVPG S +
Sbjct: 407 DSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLV 466
Query: 480 EIDDQVHQFFSLDQSSPKAEELYSVLESLIG 510
E+ ++VH+F D+S P+++ +Y+ L+ + G
Sbjct: 467 EVGNRVHEFLMGDKSHPQSDAIYAKLKEMTG 497
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 288 bits (736), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 183/587 (31%), Positives = 283/587 (48%), Gaps = 96/587 (16%)
Query: 8 QVLTILGKSNHLNHLKQLQAHLTT--LGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHL 65
++ T+L H HLKQ+ L T + + D + +L+R C + YARR+ L
Sbjct: 3 ELKTLLDLPLHFLHLKQIHCLLLTSPIFYTRRDLFLSRLLRRCCTAATQFRYARRLLCQL 62
Query: 66 HSPNIYLYTS------STFSLFRRMLCNSNPTTTR----PNNFIYPHVLKSCHESRSTGA 115
+ +I L+ S +L RR+ + R P+ +P +LK+ + R +
Sbjct: 63 QTLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNP 122
Query: 116 V--HAQIVKTGFEQYPIVQ-------------------------------TALVDSYSRG 142
HA IVK G + P V+ TA++D + R
Sbjct: 123 FQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRN 182
Query: 143 LGGLGNAEKVFDEMR-------ERNVVSF------------------------------- 164
G A F EM+ E VVS
Sbjct: 183 -GSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVF 241
Query: 165 --TAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALA 222
++++ Y + D A K+FDEMP R+V +W ALIAG Q+ F +G+ +F EM+
Sbjct: 242 IGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSD 301
Query: 223 AERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKC 282
PN TL LSAC H L G+ +H Y+ KN +++ +L+D+Y KC
Sbjct: 302 V-------APNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKC 354
Query: 283 GNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVG 342
G L A VFE +K + +W +MIN FA HG + A +F M+ V P+ VTF+
Sbjct: 355 GCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTML--SSHVSPNEVTFMA 412
Query: 343 LLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSME 402
+L+AC HGGLVE+G F M + +EP+ +HY C+VDL GR G +EA ++ M ME
Sbjct: 413 VLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPME 472
Query: 403 PDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVW 462
P VVWG+LF C ++ +L ++AA +++++ P + G +LAN+Y E WDEV V
Sbjct: 473 PTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVR 532
Query: 463 RILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSP-KAEELYSVLESL 508
+ +K Q+ K PG SWIE+ ++ +F + D P ++++LY L+++
Sbjct: 533 KQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTV 579
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 179/593 (30%), Positives = 290/593 (48%), Gaps = 101/593 (17%)
Query: 7 EQVLTILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLH 66
+Q+ T++ + +NHLKQ+ L H H D + L+ L Y+ +F H
Sbjct: 14 QQIKTLISVACTVNHLKQIHVSLIN-HHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQ 72
Query: 67 SPNIYLYTS------------STFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHE--SRS 112
PNI+LY S T LF + + F +P VLK+C SR
Sbjct: 73 FPNIFLYNSLINGFVNNHLFHETLDLFLSI----RKHGLYLHGFTFPLVLKACTRASSRK 128
Query: 113 TGA-VHAQIVKTG---------------------------FEQYP----IVQTALVDSYS 140
G +H+ +VK G F++ P + TAL Y+
Sbjct: 129 LGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYT 188
Query: 141 RG----------------------------------LGGLGNAEKVFDEMRE----RNVV 162
+G L + E + M E +N
Sbjct: 189 TSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSF 248
Query: 163 SFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALA 222
T +++ YA+ G ++ A +FD M E+D+ +W+ +I G N F EGI LF +M+
Sbjct: 249 VRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQEN 308
Query: 223 AERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKC 282
KP+ ++V LS+C L LG+W + +++F + F++N+L+DMY KC
Sbjct: 309 L-------KPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKC 361
Query: 283 GNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVG 342
G +A +VF+ +K + N+ I+ A +G + + AVF Q + G + PDG TF+G
Sbjct: 362 GAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLG--ISPDGSTFLG 419
Query: 343 LLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSME 402
LL C H GL++ G +F ++ Y ++ +EHYGC+VDL GRAG D+A ++ M M
Sbjct: 420 LLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMR 479
Query: 403 PDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVW 462
P+ +VWG+L +GC++ T LAE K+L+ ++P N G + L+N+Y G+WDE V
Sbjct: 480 PNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVR 539
Query: 463 RILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESLIGFGNEV 515
++ ++ K+PG SWIE++ +VH+F + D+S P ++++Y+ LE L GNE+
Sbjct: 540 DMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDL---GNEM 589
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 286 bits (732), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 161/486 (33%), Positives = 269/486 (55%), Gaps = 31/486 (6%)
Query: 54 NLPYARRIFDHLHSPNIYLYTS--STFS----------LFRRMLCNSNPTTTRPNNFIYP 101
N+ AR++FD + ++ + S S +S +++ ML S+ +PN
Sbjct: 182 NIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSD---FKPNGVTVI 238
Query: 102 HVLKSCHESRSTG---AVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRE 158
V ++C +S VH ++++ + + A++ Y++ G L A +FDEM E
Sbjct: 239 SVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAK-CGSLDYARALFDEMSE 297
Query: 159 RNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREM 218
++ V++ A+ISGY G V A+ LF EM + +WNA+I+G QN E I FREM
Sbjct: 298 KDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREM 357
Query: 219 VALAAERGYRC-NKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVD 277
+ RC ++PN VTL L + ++S L+ GK IH + +N + +++ S++D
Sbjct: 358 I--------RCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIID 409
Query: 278 MYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDG 337
Y K G L A++VF+ D+ L +W ++I +A+HG S+ A ++F+QM +C G +PD
Sbjct: 410 NYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQM-QCLG-TKPDD 467
Query: 338 VTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVR 397
VT +L+A H G + F+ M +Y IEP +EHY C+V +L RAG+ +AME +
Sbjct: 468 VTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFIS 527
Query: 398 GMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDE 457
M ++P VWG+L NG V G ++A FA +L E++P N G ++AN+Y + G+W+E
Sbjct: 528 KMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEE 587
Query: 458 VRNVWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESLI-GFGNEVM 516
V +K+ K+PG SWIE + + F + D S +++E+Y ++E L+ ++
Sbjct: 588 AEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEIIEGLVESMSDKEY 647
Query: 517 IEQQAL 522
I +Q L
Sbjct: 648 IRKQEL 653
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 114/463 (24%), Positives = 187/463 (40%), Gaps = 110/463 (23%)
Query: 21 HLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSPNIYLYTS----- 75
H+ QL A + +F A KL+ F A +FD + N + Y +
Sbjct: 40 HVLQLHARIVVFSIKPDNFLASKLISFYTRQ-DRFRQALHVFDEITVRNAFSYNALLIAY 98
Query: 76 -------STFSLFRRMLCNS--NPTTTRPNNFIYPHVLKS---CHE---SRSTGAVHAQI 120
FSLF + +S + RP++ VLK+ C + VH +
Sbjct: 99 TSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFV 158
Query: 121 VKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSA 180
++ GF+ V ++ Y++ + +A KVFDEM ER+VVS+ +MISGY
Sbjct: 159 IRGGFDSDVFVGNGMITYYTK-CDNIESARKVFDEMSERDVVSWNSMISGY--------- 208
Query: 181 LKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCN--KPNPVTLV 238
+Q+G F + ++++ M+A C+ KPN VT++
Sbjct: 209 ----------------------SQSGSFEDCKKMYKAMLA--------CSDFKPNGVTVI 238
Query: 239 CALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDK 298
ACG +S L G +H + +N +D + N+++ Y KCG+L AR +F+ +K
Sbjct: 239 SVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEK 298
Query: 299 -------------------------------GLTSWNSMINCFALHGQSEGAIAVFEQMV 327
GL++WN+MI+ + E I F +M+
Sbjct: 299 DSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMI 358
Query: 328 ECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTRE------YGIEPQIEHYGCLVD 381
CG RP+ VT LL + T+ ++ G R Y I++Y L
Sbjct: 359 RCGS--RPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGF 416
Query: 382 LLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLA 424
LLG FD + R + + W ++ V+G +D A
Sbjct: 417 LLGAQRVFDNCKD--RSL------IAWTAIITAYAVHGDSDSA 451
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 144/304 (47%), Gaps = 14/304 (4%)
Query: 165 TAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAE 224
+ +IS Y R AL +FDE+ R+ S+NAL+ T + + LF + +
Sbjct: 61 SKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCY 120
Query: 225 RGYRCNKPNPVTLVC---ALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGK 281
+P+ +++ C ALS C + L + +HG+V + F D F+ N ++ Y K
Sbjct: 121 SS-DAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTK 179
Query: 282 CGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFV 341
C N+ ARKVF+ ++ + SWNSMI+ ++ G E +++ M+ C D +P+GVT +
Sbjct: 180 CDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLAC-SDFKPNGVTVI 238
Query: 342 GLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSM 401
+ AC + G + M + I+ + ++ + G D A + MS
Sbjct: 239 SVFQACGQSSDLIFGLEVHKKMIENH-IQMDLSLCNAVIGFYAKCGSLDYARALFDEMS- 296
Query: 402 EPDEVVWGSLFNGCKVYG--RTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVR 459
E D V +G++ +G +G + +A F+ + + + N ++ N + E EV
Sbjct: 297 EKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHE-----EVI 351
Query: 460 NVWR 463
N +R
Sbjct: 352 NSFR 355
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 285 bits (730), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 146/362 (40%), Positives = 225/362 (62%), Gaps = 16/362 (4%)
Query: 160 NVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMV 219
N+ A+I Y++ G++++A LF+ +P +DV SWN LI G T + E + LF+EM+
Sbjct: 300 NLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEML 359
Query: 220 ALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVD--SFISNSLVD 277
PN VT++ L AC H + +G+WIH Y+ K V S + SL+D
Sbjct: 360 RSG-------ETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLID 412
Query: 278 MYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDG 337
MY KCG++ A +VF K L+SWN+MI FA+HG+++ + +F +M + G ++PD
Sbjct: 413 MYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIG--IQPDD 470
Query: 338 VTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVR 397
+TFVGLL+AC+H G+++ G F MT++Y + P++EHYGC++DLLG +G F EA E++
Sbjct: 471 ITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMIN 530
Query: 398 GMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDE 457
M MEPD V+W SL CK++G +L E A+ L++I+P N G ++L+N+Y G+W+E
Sbjct: 531 MMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNE 590
Query: 458 VRNVWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESLIGFGNEVMI 517
V +L + KVPGCS IEID VH+F D+ P+ E+Y +LE + EV++
Sbjct: 591 VAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEM-----EVLL 645
Query: 518 EQ 519
E+
Sbjct: 646 EK 647
Score = 222 bits (565), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 140/483 (28%), Positives = 250/483 (51%), Gaps = 36/483 (7%)
Query: 6 NEQVLTILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALT--LSNLPYARRIFD 63
N L++L L L+ + A + +G +T++ KL+ FC L+ LPYA +F
Sbjct: 33 NHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFK 92
Query: 64 HLHSPNIYLYTSSTFSLFRRMLCNSNPTTTR------------PNNFIYPHVLKSCHESR 111
+ PN+ ++ + +FR +S+P + PN++ +P VLKSC +S+
Sbjct: 93 TIQEPNLLIWNT----MFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSK 148
Query: 112 STG---AVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMI 168
+ +H ++K G + V T+L+ Y + G L +A KVFD+ R+VVS+TA+I
Sbjct: 149 AFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQN-GRLEDAHKVFDKSPHRDVVSYTALI 207
Query: 169 SGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYR 228
GYA G +++A KLFDE+P +DV SWNA+I+G + G + E + LF++M+
Sbjct: 208 KGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNV----- 262
Query: 229 CNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALA 288
+P+ T+V +SAC + ++LG+ +H ++ + F + I N+L+D+Y KCG L A
Sbjct: 263 --RPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETA 320
Query: 289 RKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACT 348
+FE P K + SWN++I + + A+ +F++M+ G P+ VT + +L AC
Sbjct: 321 CGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE--TPNDVTMLSILPACA 378
Query: 349 HGGLVEQG-CSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVV 407
H G ++ G + + R G+ L+D+ + G + A +V + +
Sbjct: 379 HLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSS 437
Query: 408 WGSLFNGCKVYGRTDLA--EFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRIL 465
W ++ G ++GR D + F+ + + I P + + + L + G D R+++R +
Sbjct: 438 WNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITF-VGLLSACSHSGMLDLGRHIFRTM 496
Query: 466 KQQ 468
Q
Sbjct: 497 TQD 499
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 148/367 (40%), Gaps = 75/367 (20%)
Query: 81 FRRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTGAVHAQIVKTGFEQYPIVQTALVD--S 138
F + +S+P N +L +C +S +HAQ++K G + L++
Sbjct: 17 FHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCI 76
Query: 139 YSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNAL 198
S GL A VF ++E N++ + M G+A D SALKL+ M
Sbjct: 77 LSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCM----------- 125
Query: 199 IAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHG 258
S G+ PN T L +C + + G+ IHG
Sbjct: 126 ---------ISLGLL------------------PNSYTFPFVLKSCAKSKAFKEGQQIHG 158
Query: 259 YVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPD--------------------- 297
+V K +D ++ SL+ MY + G L A KVF+ +P
Sbjct: 159 HVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIEN 218
Query: 298 ----------KGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNAC 347
K + SWN+MI+ +A G + A+ +F+ M++ +VRPD T V +++AC
Sbjct: 219 AQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKT--NVRPDESTMVTVVSAC 276
Query: 348 THGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVV 407
G +E G + ++G ++ L+DL + G + A + + + D +
Sbjct: 277 AQSGSIELG-RQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK-DVIS 334
Query: 408 WGSLFNG 414
W +L G
Sbjct: 335 WNTLIGG 341
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 285 bits (729), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 167/511 (32%), Positives = 265/511 (51%), Gaps = 65/511 (12%)
Query: 9 VLTILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTL--SNLPYARRIFDHLH 66
+L+ ++ L ++Q A + G H F A KLV F A + YA I + +
Sbjct: 42 ILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIG 101
Query: 67 SPN-------IYLYTSST-----FSLFRRMLCNSNPTTTRPNNFIYPHVLKSC------H 108
SPN I Y +S+ ++FR ML P+ + + VLK+C
Sbjct: 102 SPNGFTHNSVIRAYANSSTPEVALTVFREMLLGP----VFPDKYSFTFVLKACAAFCGFE 157
Query: 109 ESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRG-------------------------- 142
E R +H +K+G V+ LV+ Y R
Sbjct: 158 EGRQ---IHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLS 214
Query: 143 ----LGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNAL 198
G + A +FDEM ERNV S+ MISGYA G V A ++FD MP RDV SWNA+
Sbjct: 215 AYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAM 274
Query: 199 IAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHG 258
+ G ++E + +F +M+ + E KP+ TLV LSAC L G+W+H
Sbjct: 275 VTAYAHVGCYNEVLEVFNKMLDDSTE------KPDGFTLVSVLSACASLGSLSQGEWVHV 328
Query: 259 YVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEG 318
Y+ K+ ++ F++ +LVDMY KCG + A +VF + +++WNS+I+ ++HG +
Sbjct: 329 YIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKD 388
Query: 319 AIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGC 378
A+ +F +MV G +P+G+TF+G+L+AC H G+++Q FEMM+ Y +EP IEHYGC
Sbjct: 389 ALEIFSEMVYEG--FKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGC 446
Query: 379 LVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHN 438
+VDLLGR G+ +EA E+V + + ++ SL CK +G+ + AE A +LLE++ +
Sbjct: 447 MVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRD 506
Query: 439 GGYGIMLANVYGELGKWDEVRNVWRILKQQK 469
++N+Y G+W++V + R ++ ++
Sbjct: 507 SSGYAQMSNLYASDGRWEKVIDGRRNMRAER 537
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 285 bits (728), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 149/402 (37%), Positives = 232/402 (57%), Gaps = 18/402 (4%)
Query: 116 VHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVG 175
VH ++K GFE+Y + AL+ Y + G + +AE +F ++R + + S+ ++I+ + G
Sbjct: 316 VHGYVIKGGFEEYLPSRNALIHVYGKQ-GKVKDAEHLFRQIRNKGIESWNSLITSFVDAG 374
Query: 176 DVDSALKLFDEMPE--------RDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGY 227
+D AL LF E+ E +V +W ++I GC G + + FR+M +
Sbjct: 375 KLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQM-------QF 427
Query: 228 RCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLAL 287
N VT+ C LS C L LG+ IHG+V + + + N+LV+MY KCG L+
Sbjct: 428 SKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSE 487
Query: 288 ARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNAC 347
VFE DK L SWNS+I + +HG +E A+++F++M+ G PDG+ V +L+AC
Sbjct: 488 GSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSG--FHPDGIALVAVLSAC 545
Query: 348 THGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVV 407
+H GLVE+G F M++ +G+EPQ EHY C+VDLLGR G EA E+V+ M MEP V
Sbjct: 546 SHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCV 605
Query: 408 WGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQ 467
G+L N C+++ D+AE A +L ++P G ++L+N+Y G+W+E NV + K+
Sbjct: 606 LGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKK 665
Query: 468 QKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESLI 509
+ KV G SWIE+ + ++F S + E +Y VLE L+
Sbjct: 666 KDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLV 707
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 135/277 (48%), Gaps = 17/277 (6%)
Query: 96 NNFIYPHVLKSCHESRSTG---AVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKV 152
+ +I P +L++C G A H Q+++ G ++ V L+ Y + G +G+A +
Sbjct: 157 DGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKA-GRMGDAYNL 215
Query: 153 FDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPER----DVPSWNALIAGCTQNGFF 208
F EM RN +S+ MI G+++ D +SA+K+F+ M D +W ++++ +Q G F
Sbjct: 216 FVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKF 275
Query: 209 SEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVD 268
+ ++ F M N + L S C L + + +HGYV K F
Sbjct: 276 EDVLKYFHLMRMSG-------NAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEY 328
Query: 269 SFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVE 328
N+L+ +YGK G + A +F +KG+ SWNS+I F G+ + A+++F ++ E
Sbjct: 329 LPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEE 388
Query: 329 CGG--DVRPDGVTFVGLLNACTHGGLVEQGCSYFEMM 363
+V+ + VT+ ++ C G + YF M
Sbjct: 389 MNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQM 425
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 132/323 (40%), Gaps = 54/323 (16%)
Query: 42 FKLVRFCALTLSNLPYARRIFDHLHSPNIYLYTSSTFSLFRRMLCNSNPTTTRPNNFIYP 101
++L FC LT S PY + SP+ + SS +SL SN + + F
Sbjct: 16 WRLRNFCFLT-SQCPYTS-----ISSPDT-VSVSSYYSL------TSNNDQSLFHYF--D 60
Query: 102 HVLKSCHESRSTGAVHAQIVKTGFE-QYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERN 160
H+L C ++ VHAQ++ + F + + L+ Y+R LG L +A VF+
Sbjct: 61 HLLGLCLTAQQCRQVHAQVLLSDFIFRSGSLAANLISVYAR-LGLLLDARNVFE------ 113
Query: 161 VVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVA 220
VS + D+ WN+++ +G + + L+R M
Sbjct: 114 TVSLVLL----------------------SDLRLWNSILKANVSHGLYENALELYRGM-- 149
Query: 221 LAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYG 280
+RG + L L AC + L + H V + + + N L+ +Y
Sbjct: 150 --RQRGL---TGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYP 204
Query: 281 KCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTF 340
K G + A +F P + SWN MI F+ E A+ +FE M + +PD VT+
Sbjct: 205 KAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQR--EEFKPDEVTW 262
Query: 341 VGLLNACTHGGLVEQGCSYFEMM 363
+L+ + G E YF +M
Sbjct: 263 TSVLSCHSQCGKFEDVLKYFHLM 285
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 284 bits (727), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 134/352 (38%), Positives = 219/352 (62%), Gaps = 9/352 (2%)
Query: 158 ERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFRE 217
+RNV ++IS Y + +VD+A +F ++ R + SWNA+I G QNG + + F +
Sbjct: 369 DRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQ 428
Query: 218 MVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVD 277
M + R KP+ T V ++A S+ KWIHG V ++ + F++ +LVD
Sbjct: 429 MRS-------RTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVD 481
Query: 278 MYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDG 337
MY KCG + +AR +F+M ++ +T+WN+MI+ + HG + A+ +FE+M + G ++P+G
Sbjct: 482 MYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQK--GTIKPNG 539
Query: 338 VTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVR 397
VTF+ +++AC+H GLVE G F MM Y IE ++HYG +VDLLGRAGR +EA + +
Sbjct: 540 VTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIM 599
Query: 398 GMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDE 457
M ++P V+G++ C+++ + AE AA++L E++P +GGY ++LAN+Y W++
Sbjct: 600 QMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEK 659
Query: 458 VRNVWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESLI 509
V V + +Q K PGCS +EI ++VH FFS + P ++++Y+ LE LI
Sbjct: 660 VGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLI 711
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 115/425 (27%), Positives = 193/425 (45%), Gaps = 65/425 (15%)
Query: 12 ILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVR-FCALTLSNLPYARRIFDHLHSPNI 70
+L + + L L+Q+ + G F+ KLV FC ++ A R+F+ + S
Sbjct: 43 LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFC--RYGSVDEAARVFEPIDSKLN 100
Query: 71 YLYTS------------STFSLFRRMLCNSNPTTTRPNNFIYPHVLKSC---HESRSTGA 115
LY + F RM + P + + ++LK C E R
Sbjct: 101 VLYHTMLKGFAKVSDLDKALQFFVRMRYDD----VEPVVYNFTYLLKVCGDEAELRVGKE 156
Query: 116 VHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVG 175
+H +VK+GF ++ + T + + YA+
Sbjct: 157 IHGLLVKSGFSL--------------------------------DLFAMTGLENMYAKCR 184
Query: 176 DVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPV 235
V+ A K+FD MPERD+ SWN ++AG +QNG R+ EMV E KP+ +
Sbjct: 185 QVNEARKVFDRMPERDLVSWNTIVAGYSQNGM----ARMALEMVKSMCEENL---KPSFI 237
Query: 236 TLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMN 295
T+V L A ++ +GK IHGY ++ F IS +LVDMY KCG+L AR++F+
Sbjct: 238 TIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM 297
Query: 296 PDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQ 355
++ + SWNSMI+ + + + A+ +F++M++ G V+P V+ +G L+AC G +E+
Sbjct: 298 LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEG--VKPTDVSVMGALHACADLGDLER 355
Query: 356 GCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGC 415
G + ++ E G++ + L+ + + D A + G V W ++ G
Sbjct: 356 G-RFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMF-GKLQSRTLVSWNAMILGF 413
Query: 416 KVYGR 420
GR
Sbjct: 414 AQNGR 418
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 73/134 (54%), Gaps = 8/134 (5%)
Query: 92 TTRPNNFIYPHVLKSCHE---SRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGN 148
T +P+ F Y V+ + E + +H ++++ ++ V TALVD Y++ G +
Sbjct: 433 TVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAK-CGAIMI 491
Query: 149 AEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVP----SWNALIAGCTQ 204
A +FD M ER+V ++ AMI GY G +AL+LF+EM + + ++ ++I+ C+
Sbjct: 492 ARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSH 551
Query: 205 NGFFSEGIRLFREM 218
+G G++ F M
Sbjct: 552 SGLVEAGLKCFYMM 565
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 284 bits (727), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 170/521 (32%), Positives = 277/521 (53%), Gaps = 41/521 (7%)
Query: 10 LTILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCAL--TLSNL-------PYARR 60
L + ++ L K L AH+ LG +V+ C L TL N+ +A +
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLG----------IVQCCPLANTLVNVYGKCGAASHALQ 59
Query: 61 IFDHLHSPNIYLYTSSTFSLFRRMLCNSN---------PTTTRPNNFIYPHVLKSCHESR 111
+FD + + + S +L + L + RP++F++ ++K+C
Sbjct: 60 VFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLG 119
Query: 112 STG---AVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMI 168
S VH + + + +V+++LVD Y++ G L +A+ VFD +R +N +S+TAM+
Sbjct: 120 SIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAK-CGLLNSAKAVFDSIRVKNTISWTAMV 178
Query: 169 SGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYR 228
SGYA+ G + AL+LF +P +++ SW ALI+G Q+G E +F EM R R
Sbjct: 179 SGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEM------RRER 232
Query: 229 CNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALA 288
+ +P+ L + AC + + G+ +HG V F FISN+L+DMY KC ++ A
Sbjct: 233 VDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAA 292
Query: 289 RKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACT 348
+ +F + + SW S+I A HGQ+E A+A+++ MV G V+P+ VTFVGL+ AC+
Sbjct: 293 KDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHG--VKPNEVTFVGLIYACS 350
Query: 349 HGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVW 408
H G VE+G F+ MT++YGI P ++HY CL+DLLGR+G DEA ++ M PDE W
Sbjct: 351 HVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTW 410
Query: 409 GSLFNGCKVYGRTDLAEFAAKKLL-EIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQ 467
+L + CK GR + A L+ + I+L+N+Y W +V R L +
Sbjct: 411 AALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGE 470
Query: 468 QKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESL 508
+ K PG S +E+ + F++ + S P E+++ +L+ L
Sbjct: 471 MEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKL 511
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 168/523 (32%), Positives = 280/523 (53%), Gaps = 24/523 (4%)
Query: 2 KPNLNEQVLTILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVR-FCALTLSNLPYARR 60
K L +++ L +LN +KQ+ H+ G + + KL+R L + PYARR
Sbjct: 45 KELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARR 104
Query: 61 IFDHLHSPNIYLYTS--------STFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRS 112
+ + + N +L+T+ F M P +F + +LK+C +
Sbjct: 105 VIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKD 164
Query: 113 TG---AVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMIS 169
HAQ + + V ++D Y + + A KVFDEM ER+V+S+T +I+
Sbjct: 165 LNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVK-CESIDCARKVFDEMPERDVISWTELIA 223
Query: 170 GYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRC 229
YARVG+++ A +LF+ +P +D+ +W A++ G QN E + F M + G R
Sbjct: 224 AYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRM----EKSGIRA 279
Query: 230 NKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDS--FISNSLVDMYGKCGNLAL 287
++ VT+ +SAC + K+ + I ++L+DMY KCGN+
Sbjct: 280 DE---VTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEE 336
Query: 288 ARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNAC 347
A VF +K + +++SMI A HG+++ A+ +F MV +++P+ VTFVG L AC
Sbjct: 337 AVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMV-TQTEIKPNTVTFVGALMAC 395
Query: 348 THGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVV 407
+H GLV+QG F+ M + +G++P +HY C+VDLLGR GR EA+E+++ MS+EP V
Sbjct: 396 SHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGV 455
Query: 408 WGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQ 467
WG+L C+++ ++AE AA+ L E++P G I+L+NVY G W V V +++K+
Sbjct: 456 WGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKE 515
Query: 468 QKSYKVPGCSW-IEIDDQVHQFFSLDQSSPKAEELYSVLESLI 509
+ K P SW ++ + Q+H+FF + + P + ++ LE L+
Sbjct: 516 KGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELV 558
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 174/518 (33%), Positives = 278/518 (53%), Gaps = 67/518 (12%)
Query: 11 TILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALT-LSNLPYARRIFDHLHSP- 68
T++ K + +KQLQ+H T GH + F +L+ CA++ +L +A +IF ++ P
Sbjct: 8 TMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPL 67
Query: 69 ----NIYL-------YTSSTFSLFRRMLCNSNPTTT--RPNNFIYPHVLKSCHESRSTGA 115
N + + S FS +R ML S+ ++ R + LK+C + + A
Sbjct: 68 TNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSA 127
Query: 116 ---VHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYA 172
+H QI + G ++ T L+D+YS+
Sbjct: 128 MDQLHCQINRRGLSADSLLCTTLLDAYSKN------------------------------ 157
Query: 173 RVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKP 232
GD+ SA KLFDEMP RDV SWNALIAG SE + L++ M R
Sbjct: 158 --GDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRR------- 208
Query: 233 NPVTLVCALSACGHTSMLQLGKWI-HGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKV 291
+ VT+V AL AC H ++ G+ I HGY ND + +SN+ +DMY KCG + A +V
Sbjct: 209 SEVTVVAALGACSHLGDVKEGENIFHGY--SND---NVIVSNAAIDMYSKCGFVDKAYQV 263
Query: 292 FE-MNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHG 350
FE K + +WN+MI FA+HG++ A+ +F+++ + G ++PD V+++ L AC H
Sbjct: 264 FEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNG--IKPDDVSYLAALTACRHA 321
Query: 351 GLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGS 410
GLVE G S F M + G+E ++HYGC+VDLL RAGR EA +++ MSM PD V+W S
Sbjct: 322 GLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQS 380
Query: 411 LFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKS 470
L ++Y ++AE A++++ E+ +N G ++L+NVY G+W +V V ++ ++
Sbjct: 381 LLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQV 440
Query: 471 YKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESL 508
K+PG S+IE +H+F++ D+S + E+Y ++ +
Sbjct: 441 KKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEI 478
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 279 bits (713), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 158/484 (32%), Positives = 248/484 (51%), Gaps = 41/484 (8%)
Query: 19 LNHLKQLQAHLTTLGHAHTDFY---AFKLVRFCALTLSN--------LPYARRIFDHLHS 67
L HL Q A T G DF F V F ++S + YA +F + +
Sbjct: 17 LKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYATSVFRFITN 76
Query: 68 PNIY----------LYTSSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRS----- 112
P+ + L+ S+ S +R + P+ +P V K+C ++
Sbjct: 77 PSTFCFNTIIRICTLHEPSSLSS-KRFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTL 135
Query: 113 TGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYA 172
+H Q ++ G L+ YS + + +A ++FDE +R+VV++ +I G
Sbjct: 136 VKTLHCQALRFGLLSDLFTLNTLIRVYSL-IAPIDSALQLFDENPQRDVVTYNVLIDGLV 194
Query: 173 RVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKP 232
+ ++ A +LFD MP RD+ SWN+LI+G Q E I+LF EMVAL KP
Sbjct: 195 KAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGL-------KP 247
Query: 233 NPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVF 292
+ V +V LSAC + Q GK IH Y + F+DSF++ LVD Y KCG + A ++F
Sbjct: 248 DNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIF 307
Query: 293 EMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGL 352
E+ DK L +WN+MI A+HG E + F +MV G ++PDGVTF+ +L C+H GL
Sbjct: 308 ELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSG--IKPDGVTFISVLVGCSHSGL 365
Query: 353 VEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSME----PDEVVW 408
V++ + F+ M Y + +++HYGC+ DLLGRAG +EA E++ M + + W
Sbjct: 366 VDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAW 425
Query: 409 GSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQ 468
L GC+++G ++AE AA ++ + P +GG ++ +Y +W+EV V I+ +
Sbjct: 426 SGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRD 485
Query: 469 KSYK 472
K K
Sbjct: 486 KKVK 489
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 278 bits (712), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 157/462 (33%), Positives = 243/462 (52%), Gaps = 55/462 (11%)
Query: 58 ARRIFDHLHSPNIYLYTS--STFSLFR------RMLCNSNPTTTRPNNFIYPHVLKSCHE 109
A ++FD + N+ +T+ S +S + +L RPN + Y VL+SC+
Sbjct: 115 AHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNG 174
Query: 110 SRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMIS 169
+H I+K G E V++AL+D +
Sbjct: 175 MSDVRMLHCGIIKEGLESDVFVRSALIDVF------------------------------ 204
Query: 170 GYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREM--VALAAERGY 227
A++G+ + AL +FDEM D WN++I G QN + LF+ M AE+
Sbjct: 205 --AKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQA- 261
Query: 228 RCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLAL 287
TL L AC ++L+LG H ++ K D D ++N+LVDMY KCG+L
Sbjct: 262 --------TLTSVLRACTGLALLELGMQAHVHIVKYD--QDLILNNALVDMYCKCGSLED 311
Query: 288 ARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNAC 347
A +VF ++ + +W++MI+ A +G S+ A+ +FE+M G +P+ +T VG+L AC
Sbjct: 312 ALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSG--TKPNYITIVGVLFAC 369
Query: 348 THGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVV 407
+H GL+E G YF M + YGI+P EHYGC++DLLG+AG+ D+A++++ M EPD V
Sbjct: 370 SHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVT 429
Query: 408 WGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQ 467
W +L C+V LAE+AAKK++ +DP + G +L+N+Y KWD V + ++
Sbjct: 430 WRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRD 489
Query: 468 QKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESLI 509
+ K PGCSWIE++ Q+H F D S P+ E+ L LI
Sbjct: 490 RGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLI 531
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 141/331 (42%), Gaps = 57/331 (17%)
Query: 166 AMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAER 225
+I+ Y + ++ A +LFD+MP+R+V SW +I+ ++ + + L M+
Sbjct: 101 VLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLML------ 154
Query: 226 GYRCN-KPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGN 284
R N +PN T L +C S +++ +H + K D F+ ++L+D++ K G
Sbjct: 155 --RDNVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGE 209
Query: 285 LALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLL 344
A VF+ WNS+I FA + +S+ A+ +F++M G + T +L
Sbjct: 210 PEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAG--FIAEQATLTSVL 267
Query: 345 NACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPD 404
ACT L+E G + + + + LVD+ + G ++A+ V M E D
Sbjct: 268 RACTGLALLELGMQAHVHIVK---YDQDLILNNALVDMYCKCGSLEDALRVFNQMK-ERD 323
Query: 405 EVVWGSLFNGCKV--YGRTDLAEF------------------------------------ 426
+ W ++ +G Y + L F
Sbjct: 324 VITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFR 383
Query: 427 AAKKLLEIDPHNGGYGIMLANVYGELGKWDE 457
+ KKL IDP YG M+ ++ G+ GK D+
Sbjct: 384 SMKKLYGIDPVREHYGCMI-DLLGKAGKLDD 413
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 87/192 (45%), Gaps = 23/192 (11%)
Query: 241 LSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGL 300
+ C + G I ++Y N F+ N L++MY K L A ++F+ P + +
Sbjct: 68 IKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNV 127
Query: 301 TSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACT--------HGGL 352
SW +MI+ ++ + A+ + M+ +VRP+ T+ +L +C H G+
Sbjct: 128 ISWTTMISAYSKCKIHQKALELLVLMLR--DNVRPNVYTYSSVLRSCNGMSDVRMLHCGI 185
Query: 353 VEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLF 412
+++ G+E + L+D+ + G ++A+ V M + D +VW S+
Sbjct: 186 IKE------------GLESDVFVRSALIDVFAKLGEPEDALSVFDEM-VTGDAIVWNSII 232
Query: 413 NGCKVYGRTDLA 424
G R+D+A
Sbjct: 233 GGFAQNSRSDVA 244
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 278 bits (712), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 134/343 (39%), Positives = 206/343 (60%), Gaps = 8/343 (2%)
Query: 166 AMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAER 225
A++ YA+ G + A +F EM +D+ SWN +I G ++N + +E + LF L E+
Sbjct: 437 ALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFN---LLLEEK 493
Query: 226 GYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNL 285
+ P+ T+ C L AC S G+ IHGY+ +N +F D ++NSLVDMY KCG L
Sbjct: 494 RF---SPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGAL 550
Query: 286 ALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLN 345
LA +F+ K L SW MI + +HG + AIA+F QM + G + D ++FV LL
Sbjct: 551 LLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAG--IEADEISFVSLLY 608
Query: 346 ACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDE 405
AC+H GLV++G +F +M E IEP +EHY C+VD+L R G +A + M + PD
Sbjct: 609 ACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDA 668
Query: 406 VVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRIL 465
+WG+L GC+++ LAE A+K+ E++P N GY +++AN+Y E KW++V+ + + +
Sbjct: 669 TIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRI 728
Query: 466 KQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESL 508
Q+ K PGCSWIEI +V+ F + D S+P+ E + + L +
Sbjct: 729 GQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKV 771
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 168/376 (44%), Gaps = 62/376 (16%)
Query: 54 NLPYARRIFDHLHSPNIYLYT------------SSTFSLFRRMLCNSNPTTTRPNNFIYP 101
+L A R+FD + + S + LF++M+ + +++ +
Sbjct: 144 DLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMM----SSGVEMDSYTFS 199
Query: 102 HVLKSCHESRSTGA---VHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRE 158
V KS RS +H I+K+GF E
Sbjct: 200 CVSKSFSSLRSVHGGEQLHGFILKSGFG-------------------------------E 228
Query: 159 RNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREM 218
RN V ++++ Y + VDSA K+FDEM ERDV SWN++I G NG +G+ +F +M
Sbjct: 229 RNSVG-NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQM 287
Query: 219 VALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDM 278
+ E + T+V + C + ++ LG+ +H K F + N+L+DM
Sbjct: 288 LVSGIE-------IDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDM 340
Query: 279 YGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGV 338
Y KCG+L A+ VF D+ + S+ SMI +A G + A+ +FE+M E G + PD
Sbjct: 341 YSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG--ISPDVY 398
Query: 339 TFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRG 398
T +LN C L+++G E + +E + I L+D+ + G EA V
Sbjct: 399 TVTAVLNCCARYRLLDEGKRVHEWI-KENDLGFDIFVSNALMDMYAKCGSMQEAELVFSE 457
Query: 399 MSMEPDEVVWGSLFNG 414
M ++ D + W ++ G
Sbjct: 458 MRVK-DIISWNTIIGG 472
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 103/190 (54%), Gaps = 8/190 (4%)
Query: 167 MISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERG 226
++ Y++ GD+DSA +F EM +R V S+ ++IAG + G E ++LF EM E G
Sbjct: 337 LLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM----EEEG 392
Query: 227 YRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLA 286
P+ T+ L+ C +L GK +H ++ +ND D F+SN+L+DMY KCG++
Sbjct: 393 I---SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQ 449
Query: 287 LARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNA 346
A VF K + SWN++I ++ + + A+++F ++E PD T +L A
Sbjct: 450 EAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLE-EKRFSPDERTVACVLPA 508
Query: 347 CTHGGLVEQG 356
C ++G
Sbjct: 509 CASLSAFDKG 518
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 156/355 (43%), Gaps = 45/355 (12%)
Query: 83 RMLCNSNPTTTRPNNFIYPHVLKSCHESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRG 142
++LC S P VL+ C +S+S +K G E VD++ RG
Sbjct: 82 KLLCVSGKWDIDPRTLC--SVLQLCADSKS--------LKDGKE---------VDNFIRG 122
Query: 143 LGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGC 202
G + ++ N+ S +++ Y GD+ A ++FDE+ WN L+
Sbjct: 123 NGFVIDS----------NLGSKLSLM--YTNCGDLKEASRVFDEVKIEKALFWNILMNEL 170
Query: 203 TQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYK 262
++G FS I LF++M++ E + T C + + G+ +HG++ K
Sbjct: 171 AKSGDFSGSIGLFKKMMSSGVE-------MDSYTFSCVSKSFSSLRSVHGGEQLHGFILK 223
Query: 263 NDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAV 322
+ F + + NSLV Y K + ARKVF+ ++ + SWNS+IN + +G +E ++V
Sbjct: 224 SGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSV 283
Query: 323 FEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDL 382
F QM+ G + D T V + C L+ G + + + + L+D+
Sbjct: 284 FVQMLVSG--IEIDLATIVSVFAGCADSRLISLGRAVHSIGVKAC-FSREDRFCNTLLDM 340
Query: 383 LGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPH 437
+ G D A V R MS + V + S+ G Y R LA A K E++
Sbjct: 341 YSKCGDLDSAKAVFREMS-DRSVVSYTSMIAG---YAREGLAGEAVKLFEEMEEE 391
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 105/244 (43%), Gaps = 40/244 (16%)
Query: 73 YTSSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTGA---VHAQIVKTGFEQYP 129
Y + SLF +L P+ VL +C + +H I++ G+
Sbjct: 478 YANEALSLFNLLL---EEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDR 534
Query: 130 IVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMP- 188
V +LVD Y++ G L A +FD++ +++VS+T MI+GY G A+ LF++M
Sbjct: 535 HVANSLVDMYAK-CGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQ 593
Query: 189 ---ERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCN-KPNPVTLVCALSAC 244
E D S+ +L+ C+ +G EG R F M + C +P C +
Sbjct: 594 AGIEADEISFVSLLYACSHSGLVDEGWRFFNIM-------RHECKIEPTVEHYACIVDML 646
Query: 245 GHTSMLQLGKWIHGYVYKNDFFV--DSFISNSLVDMYGKCG-------NLA--LARKVFE 293
T G I Y + + + D+ I +L+ CG LA +A KVFE
Sbjct: 647 ART-----GDLIKAYRFIENMPIPPDATIWGALL-----CGCRIHHDVKLAEKVAEKVFE 696
Query: 294 MNPD 297
+ P+
Sbjct: 697 LEPE 700
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 278 bits (711), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 165/518 (31%), Positives = 273/518 (52%), Gaps = 61/518 (11%)
Query: 9 VLTILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLS-NLPYARRIFDHLHS 67
++ +L N + L+++ +H+ G H L+RFCA++++ +L +A+ +FDH S
Sbjct: 8 IVRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDS 67
Query: 68 -PNI----YL---YTSSTFSL-----FRRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTG 114
P+ YL +++S+ L + RML +S +RP+ F + LKSC +S
Sbjct: 68 DPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSS---VSRPDLFTFNFALKSCERIKSIP 124
Query: 115 A---VHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGY 171
+H ++++GF IV T+LV YS
Sbjct: 125 KCLEIHGSVIRSGFLDDAIVATSLVRCYSAN----------------------------- 155
Query: 172 ARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNK 231
G V+ A K+FDEMP RD+ SWN +I + G ++ + +++ M G
Sbjct: 156 ---GSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRM-------GNEGVC 205
Query: 232 PNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKV 291
+ TLV LS+C H S L +G +H F+SN+L+DMY KCG+L A V
Sbjct: 206 GDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGV 265
Query: 292 FEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGG 351
F + + +WNSMI + +HG AI+ F +MV G VRP+ +TF+GLL C+H G
Sbjct: 266 FNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASG--VRPNAITFLGLLLGCSHQG 323
Query: 352 LVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSL 411
LV++G +FE+M+ ++ + P ++HYGC+VDL GRAG+ + ++E++ S D V+W +L
Sbjct: 324 LVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTL 383
Query: 412 FNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSY 471
CK++ +L E A KKL++++ N G +++ ++Y ++ ++++
Sbjct: 384 LGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQ 443
Query: 472 KVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESLI 509
VPG SWIEI DQVH+F D+ P++ +YS L +I
Sbjct: 444 TVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVI 481
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 278 bits (710), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 157/436 (36%), Positives = 243/436 (55%), Gaps = 26/436 (5%)
Query: 81 FRRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTG---AVHAQIVKTGFEQYPIVQTALVD 137
F+R+LC RPN F + V+ S SR +H +K G V +A+++
Sbjct: 81 FKRLLC----LGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLN 136
Query: 138 SYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNA 197
Y + L L +A + FD+ R+ NVVS T +ISGY + + + AL LF MPER V +WNA
Sbjct: 137 CYVK-LSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNA 195
Query: 198 LIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIH 257
+I G +Q G E + F +M+ G PN T CA++A + + GK IH
Sbjct: 196 VIGGFSQTGRNEEAVNTFVDML----REGVVI--PNESTFPCAITAISNIASHGAGKSIH 249
Query: 258 GYVYK---NDFFVDSFISNSLVDMYGKCGNLALARKVFEM--NPDKGLTSWNSMINCFAL 312
K F V F+ NSL+ Y KCGN+ + F + + SWNSMI +A
Sbjct: 250 ACAIKFLGKRFNV--FVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAH 307
Query: 313 HGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEP- 371
+G+ E A+A+FE+MV+ ++RP+ VT +G+L AC H GL+++G YF +Y +P
Sbjct: 308 NGRGEEAVAMFEKMVK-DTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYD-DPN 365
Query: 372 --QIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAK 429
++EHY C+VD+L R+GRF EA E+++ M ++P W +L GC+++ LA+ AA
Sbjct: 366 LLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAAS 425
Query: 430 KLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVPGCSWIEIDDQVHQFF 489
K+LE+DP + +ML+N Y + W V + R +K+ + GCSWIE+ DQ+ F
Sbjct: 426 KILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKETGLKRFTGCSWIEVRDQIRVFV 485
Query: 490 SLDQSSPKAEELYSVL 505
+ D+++ +E+Y +L
Sbjct: 486 NADKNNELKDEVYRML 501
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 114/262 (43%), Gaps = 19/262 (7%)
Query: 177 VDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVT 236
+ +A K+FDE+PE DV S A+I + E + F+ ++ L +PN T
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGI-------RPNEFT 95
Query: 237 LVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNP 296
+ + + ++LGK +H Y K + F+ +++++ Y K L AR+ F+
Sbjct: 96 FGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTR 155
Query: 297 DKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQG 356
D + S ++I+ + + E A+++F M E VT+ ++ + G E+
Sbjct: 156 DPNVVSITNLISGYLKKHEFEEALSLFRAMPE------RSVVTWNAVIGGFSQTGRNEEA 209
Query: 357 CSYFEMMTREYGIEPQIEHYGCLVDLLGR-----AGRFDEAMEVVRGMSMEPDEVVWGSL 411
+ F M RE + P + C + + AG+ A ++ + + VW SL
Sbjct: 210 VNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHAC-AIKFLGKRFNVFVWNSL 268
Query: 412 FNGCKVYGRTDLAEFAAKKLLE 433
+ G + + A KL E
Sbjct: 269 ISFYSKCGNMEDSLLAFNKLEE 290
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 276 bits (705), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 154/504 (30%), Positives = 263/504 (52%), Gaps = 58/504 (11%)
Query: 23 KQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSPNIYLYTS------- 75
KQ G+ F + L+ + T L AR++FD + NI +TS
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYS-TCGKLEDARKVFDEIPKRNIVSWTSMIRGYDL 154
Query: 76 -----STFSLFRRMLCNSNPTTTRP--NNFIYPHVLKSCHESRSTG---AVHAQIVKTGF 125
SLF+ +L + N ++ V+ +C + G ++H+ ++K GF
Sbjct: 155 NGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGF 214
Query: 126 EQYPIVQTALVDSYSR-GLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLF 184
++ V L+D+Y++ G GG+ A K+FD++ +++ VS+ +++S YA+ G + A ++F
Sbjct: 215 DRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVF 274
Query: 185 DEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSAC 244
+ + V ++NA +TL L A
Sbjct: 275 RRLVKNKVVTFNA-------------------------------------ITLSTVLLAV 297
Query: 245 GHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWN 304
H+ L++GK IH V + D + S++DMY KCG + ARK F+ +K + SW
Sbjct: 298 SHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWT 357
Query: 305 SMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMT 364
+MI + +HG + A+ +F M++ G VRP+ +TFV +L AC+H GL +G +F M
Sbjct: 358 AMIAGYGMHGHAAKALELFPAMIDSG--VRPNYITFVSVLAACSHAGLHVEGWRWFNAMK 415
Query: 365 REYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLA 424
+G+EP +EHYGC+VDLLGRAG +A ++++ M M+PD ++W SL C+++ +LA
Sbjct: 416 GRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELA 475
Query: 425 EFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVPGCSWIEIDDQ 484
E + +L E+D N GY ++L+++Y + G+W +V V I+K + K PG S +E++ +
Sbjct: 476 EISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGE 535
Query: 485 VHQFFSLDQSSPKAEELYSVLESL 508
VH F D+ P+ E++Y L L
Sbjct: 536 VHVFLIGDEEHPQREKIYEFLAEL 559
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 154/347 (44%), Gaps = 48/347 (13%)
Query: 95 PNNFIYPHVLKSCH---ESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEK 151
P +P +K+C + S H Q G++ V +AL+ YS G L +A K
Sbjct: 74 PTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYST-CGKLEDARK 132
Query: 152 VFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEG 211
VFDE+ +RN+VS+T+MI GY G+ A+ LF ++ + +A+
Sbjct: 133 VFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFL----------- 181
Query: 212 IRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFI 271
+ + LV +SAC L + IH +V K F +
Sbjct: 182 ---------------------DSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSV 220
Query: 272 SNSLVDMYGKCGN--LALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVEC 329
N+L+D Y K G +A+ARK+F+ DK S+NS+++ +A G S A VF ++V+
Sbjct: 221 GNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVK- 279
Query: 330 GGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRF 389
V + +T +L A +H G + G + + R G+E + ++D+ + GR
Sbjct: 280 NKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIR-MGLEDDVIVGTSIIDMYCKCGRV 338
Query: 390 DEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDP 436
+ A + M + W ++ G ++G A K LE+ P
Sbjct: 339 ETARKAFDRMK-NKNVRSWTAMIAGYGMHGH-------AAKALELFP 377
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 15/185 (8%)
Query: 183 LFDEMPER-DVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCAL 241
LF+ ++ DV SWN++IA ++G +E + F M L+ P + CA+
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSL-------YPTRSSFPCAI 83
Query: 242 SACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLT 301
AC + GK H + + D F+S++L+ MY CG L ARKVF+ P + +
Sbjct: 84 KACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIV 143
Query: 302 SWNSMINCFALHGQSEGAIAVFEQMVECGGD----VRPDGVTFVGLLNACTH---GGLVE 354
SW SMI + L+G + A+++F+ ++ D + D + V +++AC+ GL E
Sbjct: 144 SWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTE 203
Query: 355 QGCSY 359
S+
Sbjct: 204 SIHSF 208
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 158/454 (34%), Positives = 234/454 (51%), Gaps = 63/454 (13%)
Query: 55 LPYARRIFD-----HLHSPNIYLYTSSTFS----------LFRRMLCNSNPTTTRPNNFI 99
L AR+IFD L + ++ + +S ++ MLC + P NF
Sbjct: 183 LDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLC----SFIEPGNFS 238
Query: 100 YPHVLKSC---HESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEM 156
LK+C + R +HAQIVK EKV
Sbjct: 239 ISVALKACVDLKDLRVGRGIHAQIVK-------------------------RKEKV---- 269
Query: 157 RERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFR 216
+ V + ++ Y G D A K+FD M ER+V +WN+LI+ ++ E LFR
Sbjct: 270 ---DQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFR 326
Query: 217 EMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLV 276
+M + TL L AC + L GK IH + K+ D + NSL+
Sbjct: 327 KMQEEMIGFSW-------ATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLM 379
Query: 277 DMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPD 336
DMYGKCG + +R+VF++ K L SWN M+NC+A++G E I +FE M+E G V PD
Sbjct: 380 DMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESG--VAPD 437
Query: 337 GVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVV 396
G+TFV LL+ C+ GL E G S FE M E+ + P +EHY CLVD+LGRAG+ EA++V+
Sbjct: 438 GITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVI 497
Query: 397 RGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWD 456
M +P +WGSL N C+++G + E AAK+L ++PHN G +M++N+Y + WD
Sbjct: 498 ETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWD 557
Query: 457 EVRNVWRILKQQKSYKVPGCSWIEIDDQVHQFFS 490
V + ++KQ+ K GCSW+++ D++ F +
Sbjct: 558 NVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVA 591
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 272 bits (696), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 143/415 (34%), Positives = 230/415 (55%), Gaps = 40/415 (9%)
Query: 99 IYPHVLKSCHESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRE 158
+ P ++S SR A+H +VK G ++ VQ L+D YSR
Sbjct: 411 VVPACVRSGAFSRKE-AIHGFVVKRGLDRDRFVQNTLMDMYSR----------------- 452
Query: 159 RNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREM 218
+G +D A+++F +M +RD+ +WN +I G + + + L +M
Sbjct: 453 ---------------LGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKM 497
Query: 219 VAL---AAERGYRCN-KPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNS 274
L ++ R + KPN +TL+ L +C S L GK IH Y KN+ D + ++
Sbjct: 498 QNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSA 557
Query: 275 LVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVR 334
LVDMY KCG L ++RKVF+ P K + +WN +I + +HG + AI + M+ G V+
Sbjct: 558 LVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQG--VK 615
Query: 335 PDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAME 394
P+ VTF+ + AC+H G+V++G F +M +YG+EP +HY C+VDLLGRAGR EA +
Sbjct: 616 PNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQ 675
Query: 395 VVRGMSMEPDEV-VWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELG 453
++ M + ++ W SL +++ ++ E AA+ L++++P+ + ++LAN+Y G
Sbjct: 676 LMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAG 735
Query: 454 KWDEVRNVWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESL 508
WD+ V R +K+Q K PGCSWIE D+VH+F + D S P++E+L LE+L
Sbjct: 736 LWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETL 790
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 121/258 (46%), Gaps = 11/258 (4%)
Query: 158 ERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFRE 217
E N +++ Y ++G + S+ L RD+ +WN +++ QN E + RE
Sbjct: 233 ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLRE 292
Query: 218 MVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKN-DFFVDSFISNSLV 276
MV E P+ T+ L AC H ML+ GK +H Y KN +SF+ ++LV
Sbjct: 293 MVLEGVE-------PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALV 345
Query: 277 DMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPD 336
DMY C + R+VF+ D+ + WN+MI ++ + + A+ +F M E G + +
Sbjct: 346 DMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAG-LLAN 404
Query: 337 GVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVV 396
T G++ AC G + + + + G++ L+D+ R G+ D AM +
Sbjct: 405 STTMAGVVPACVRSGAFSRKEAIHGFVVKR-GLDRDRFVQNTLMDMYSRLGKIDIAMRIF 463
Query: 397 RGMSMEPDEVVWGSLFNG 414
M + D V W ++ G
Sbjct: 464 GKME-DRDLVTWNTMITG 480
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 153/370 (41%), Gaps = 76/370 (20%)
Query: 95 PNNFIYPHVLKSCHESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFD 154
P+ F VL +C H ++++TG E + +Y+ G L
Sbjct: 300 PDEFTISSVLPACS--------HLEMLRTGKELH---------AYALKNGSL-------- 334
Query: 155 EMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRL 214
+ N +A++ Y V S ++FD M +R + WNA+IAG +QN E + L
Sbjct: 335 ---DENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLL 391
Query: 215 FREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNS 274
F + + G N T+ + AC + + IHG+V K D F+ N+
Sbjct: 392 F---IGMEESAGLLANS---TTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNT 445
Query: 275 LVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQM------VE 328
L+DMY + G + +A ++F D+ L +WN+MI + E A+ + +M V
Sbjct: 446 LMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVS 505
Query: 329 CGG---DVRPDGVTFVGLLNACTHGGLVEQG----------------------------C 357
G ++P+ +T + +L +C + +G C
Sbjct: 506 KGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKC 565
Query: 358 SYFEMMTREYGIEPQ--IEHYGCLVDLLGRAGRFDEAMEVVRGM---SMEPDEVVWGSLF 412
+M + + PQ + + ++ G G EA++++R M ++P+EV + S+F
Sbjct: 566 GCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVF 625
Query: 413 NGCKVYGRTD 422
C G D
Sbjct: 626 AACSHSGMVD 635
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 122/270 (45%), Gaps = 49/270 (18%)
Query: 94 RPNNFIYPHVLKSCHESRST---GAVHAQIVKTGFEQYPI-VQTALVDSYSRGLGGLGNA 149
+P+N+ +P +LK+ + + +HA + K G+ + V LV+ Y R G G
Sbjct: 94 KPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLY-RKCGDFGAV 152
Query: 150 EKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFS 209
KVFD + ERN VS+ ++IS + AL+ F M + +V
Sbjct: 153 YKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENV----------------- 195
Query: 210 EGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSM---LQLGKWIHGYVYKNDFF 266
+P+ TLV ++AC + M L +GK +H Y +
Sbjct: 196 ---------------------EPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-E 233
Query: 267 VDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQM 326
++SFI N+LV MYGK G LA ++ + + L +WN++++ + Q A+ +M
Sbjct: 234 LNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREM 293
Query: 327 VECGGDVRPDGVTFVGLLNACTHGGLVEQG 356
V G V PD T +L AC+H ++ G
Sbjct: 294 VLEG--VEPDEFTISSVLPACSHLEMLRTG 321
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 119/251 (47%), Gaps = 24/251 (9%)
Query: 195 WNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGK 254
W L+ ++ E + + +M+ L KP+ L A ++LGK
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGI-------KPDNYAFPALLKAVADLQDMELGK 117
Query: 255 WIHGYVYKNDFFVDSF-ISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALH 313
IH +VYK + VDS ++N+LV++Y KCG+ KVF+ ++ SWNS+I+
Sbjct: 118 QIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSF 177
Query: 314 GQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTRE---YGIE 370
+ E A+ F M++ +V P T V ++ AC++ + E MM ++ YG+
Sbjct: 178 EKWEMALEAFRCMLD--ENVEPSSFTLVSVVTACSNLPMPEG-----LMMGKQVHAYGLR 230
Query: 371 P-QIEHY--GCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNG-CKVYGRTDLAEF 426
++ + LV + G+ G+ + +V+ G D V W ++ + C+ + E+
Sbjct: 231 KGELNSFIINTLVAMYGKLGKLASS-KVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEY 289
Query: 427 AAKKLLE-IDP 436
+ +LE ++P
Sbjct: 290 LREMVLEGVEP 300
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 130/326 (39%), Gaps = 64/326 (19%)
Query: 66 HSPNIYLYTSSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTGA---VHAQIVK 122
H + L +L R++ ++ + +PN+ +L SC + +HA +K
Sbjct: 486 HHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIK 545
Query: 123 TGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALK 182
V +ALVD Y++ G L + KVFD++ ++NV+++ +I Y G+ A+
Sbjct: 546 NNLATDVAVGSALVDMYAK-CGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAID 604
Query: 183 LFDEMPERDVP----SWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLV 238
L M + V ++ ++ A C+ +G EG+R+F
Sbjct: 605 LLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF----------------------- 641
Query: 239 CALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISN--SLVDMYGKCGNLALARKVFEMNP 296
YV K D+ V+ + +VD+ G+ G + A ++ M P
Sbjct: 642 --------------------YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMP 681
Query: 297 D--KGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVE 354
+W+S++ +H E + +++ +V +V L N + GL +
Sbjct: 682 RDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNV---ASHYVLLANIYSSAGLWD 738
Query: 355 QGCSYFEMMTREYGIEPQ-----IEH 375
+ M +E G+ + IEH
Sbjct: 739 KATEVRRNM-KEQGVRKEPGCSWIEH 763
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 272 bits (695), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 172/508 (33%), Positives = 266/508 (52%), Gaps = 61/508 (12%)
Query: 23 KQLQAHLTTLGHAHTDFYAFKLVRF---CALTLSNLPYARRIFDHLHSPNIYL------- 72
+ L AHL T G A A KLV F C L AR++FD + +I
Sbjct: 36 RVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLD----ARKVFDEMPKRDISGCVVMIGA 91
Query: 73 -----YTSSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHE--SRSTGA-VHAQIVKTG 124
Y + FR M + + + FI P +LK+ R G +H ++K
Sbjct: 92 CARNGYYQESLDFFREMYKDG----LKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFS 147
Query: 125 FEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLF 184
+E + ++L+D YS+ G +GNA KVF ++ E+++V F AMISGYA D AL L
Sbjct: 148 YESDAFIVSSLIDMYSK-FGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLV 206
Query: 185 DEMP----ERDVPSWNALIAGCTQ----------------NGFFSEGIRLFREMVALA-- 222
+M + DV +WNALI+G + +G+ + + + L
Sbjct: 207 KDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHN 266
Query: 223 --AERGYRCNK--------PNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFIS 272
E+ + K PN T++ L AC + ++ GK IHGY F+
Sbjct: 267 FQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVR 326
Query: 273 NSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGD 332
++L+DMYGKCG ++ A +F P K ++NSMI C+A HG ++ A+ +F+QM E G+
Sbjct: 327 SALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQM-EATGE 385
Query: 333 VRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEA 392
+ D +TF +L AC+H GL + G + F +M +Y I P++EHY C+VDLLGRAG+ EA
Sbjct: 386 -KLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEA 444
Query: 393 MEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGEL 452
E+++ M MEPD VWG+L C+ +G +LA AAK L E++P N G G++L ++Y
Sbjct: 445 YEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANA 504
Query: 453 GKWDEVRNVWRILKQQKSYKVPGCSWIE 480
G W+ V + +++K+++ + G SW+E
Sbjct: 505 GSWESVVRMKKMIKKKRFRRFLGSSWVE 532
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 272 bits (695), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 135/364 (37%), Positives = 218/364 (59%), Gaps = 9/364 (2%)
Query: 126 EQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFD 185
E+ I +++D Y + G + +A+ +FD M R+VV++ MI GYA++G V A LFD
Sbjct: 249 EKDLISWNSMIDGYVKH-GRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFD 307
Query: 186 EMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACG 245
+MP RDV ++N+++AG QN + E + +F +M E+ P+ TLV L A
Sbjct: 308 QMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDM-----EKESHL-LPDDTTLVIVLPAIA 361
Query: 246 HTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNS 305
L +H Y+ + F++ + +L+DMY KCG++ A VFE +K + WN+
Sbjct: 362 QLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNA 421
Query: 306 MINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTR 365
MI A+HG E A + Q+ ++PD +TFVG+LNAC+H GLV++G FE+M R
Sbjct: 422 MIGGLAIHGLGESAFDMLLQIERLS--LKPDDITFVGVLNACSHSGLVKEGLLCFELMRR 479
Query: 366 EYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAE 425
++ IEP+++HYGC+VD+L R+G + A ++ M +EP++V+W + C + + E
Sbjct: 480 KHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGE 539
Query: 426 FAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVPGCSWIEIDDQV 485
AK L+ +N ++L+N+Y G W +VR V ++K++K K+PGCSWIE+D +V
Sbjct: 540 LVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRV 599
Query: 486 HQFF 489
H+FF
Sbjct: 600 HEFF 603
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 157/360 (43%), Gaps = 56/360 (15%)
Query: 96 NNFIYPHVLKSCHE---SRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKV 152
+ F VLK+C + +H + KTG +Q L+ Y + G LG + ++
Sbjct: 120 DKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLK-CGCLGLSRQM 178
Query: 153 FDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMP--ERDVPSWNALIAGCTQNGFFSE 210
FD M +R+ VS+ +MI GY + G + SA +LFD MP +++ SWN++I+G Q S+
Sbjct: 179 FDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQT---SD 235
Query: 211 GIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVY-------KN 263
G+ + ++ A E+ ++ I GYV K
Sbjct: 236 GVDIASKLFADMPEK----------------------DLISWNSMIDGYVKHGRIEDAKG 273
Query: 264 DFFV----DSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGA 319
F V D +++D Y K G + A+ +F+ P + + ++NSM+ + + A
Sbjct: 274 LFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEA 333
Query: 320 IAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYG-- 377
+ +F M E + PD T V +L A G + + Y +E Q G
Sbjct: 334 LEIFSDM-EKESHLLPDDTTLVIVLPAIAQLGRLSKAID-----MHLYIVEKQFYLGGKL 387
Query: 378 --CLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEID 435
L+D+ + G AM V G+ + + W ++ G ++G L E A LL+I+
Sbjct: 388 GVALIDMYSKCGSIQHAMLVFEGIENKSID-HWNAMIGGLAIHG---LGESAFDMLLQIE 443
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 148/351 (42%), Gaps = 51/351 (14%)
Query: 102 HVLKSCHESRSTGAVHAQIVKTGFEQYPIVQTALVDSY--SRGLGGLGNAEKVFDEMRER 159
HVL SC S +H +++KTG + + T +V ++ SR A VF E
Sbjct: 17 HVLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVF---HEY 73
Query: 160 NVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMV 219
+V SF+ G+V+ D WNA+I + + R ++
Sbjct: 74 HVCSFS--------FGEVE------------DPFLWNAVIKSHSHG----KDPRQALLLL 109
Query: 220 ALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMY 279
L E G +K +L L AC ++ G IHG++ K + D F+ N L+ +Y
Sbjct: 110 CLMLENGVSVDK---FSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLY 166
Query: 280 GKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVT 339
KCG L L+R++F+ P + S+NSMI+ + G A +F D+ P +
Sbjct: 167 LKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELF--------DLMPMEMK 218
Query: 340 FVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIE--HYGCLVDLLGRAGRFDEAMEVVR 397
+ N+ G Q ++ ++ + P+ + + ++D + GR ++A +
Sbjct: 219 NLISWNSMISG--YAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFD 276
Query: 398 GMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNG--GYGIMLA 446
M D V W ++ +G Y + AK L + PH Y M+A
Sbjct: 277 VMP-RRDVVTWATMIDG---YAKLGFVHH-AKTLFDQMPHRDVVAYNSMMA 322
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 133/345 (38%), Positives = 216/345 (62%), Gaps = 8/345 (2%)
Query: 166 AMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAER 225
+++ YA GDV SA K+FD+MPE+D+ +WN++I G +NG E + L+ EM
Sbjct: 28 SLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM------- 80
Query: 226 GYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNL 285
+ KP+ T+V LSAC L LGK +H Y+ K + SN L+D+Y +CG +
Sbjct: 81 NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRV 140
Query: 286 ALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLN 345
A+ +F+ DK SW S+I A++G + AI +F+ M G + P +TFVG+L
Sbjct: 141 EEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG-LLPCEITFVGILY 199
Query: 346 ACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDE 405
AC+H G+V++G YF M EY IEP+IEH+GC+VDLL RAG+ +A E ++ M M+P+
Sbjct: 200 ACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNV 259
Query: 406 VVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRIL 465
V+W +L C V+G +DLAEFA ++L+++P++ G ++L+N+Y +W +V+ + + +
Sbjct: 260 VIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQM 319
Query: 466 KQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESLIG 510
+ KVPG S +E+ ++VH+F D+S P+++ +Y+ L+ + G
Sbjct: 320 LRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTG 364
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 96/170 (56%), Gaps = 4/170 (2%)
Query: 250 LQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINC 309
++LG+ IH V ++ F ++ NSL+ +Y CG++A A KVF+ P+K L +WNS+IN
Sbjct: 4 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING 63
Query: 310 FALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGI 369
FA +G+ E A+A++ +M G ++PDG T V LL+AC G + G M + G+
Sbjct: 64 FAENGKPEEALALYTEMNSKG--IKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK-VGL 120
Query: 370 EPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYG 419
+ L+DL R GR +EA + M ++ + V W SL G V G
Sbjct: 121 TRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNG 169
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 80/164 (48%), Gaps = 10/164 (6%)
Query: 159 RNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREM 218
RN+ S ++ YAR G V+ A LFDEM +++ SW +LI G NGF E I LF+ M
Sbjct: 122 RNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 181
Query: 219 VALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISN--SLV 276
+ P +T V L AC H M++ G + + + ++ ++ I + +V
Sbjct: 182 ESTEGLL------PCEITFVGILYACSHCGMVKEG-FEYFRRMREEYKIEPRIEHFGCMV 234
Query: 277 DMYGKCGNLALARKVFEMNP-DKGLTSWNSMINCFALHGQSEGA 319
D+ + G + A + + P + W +++ +HG S+ A
Sbjct: 235 DLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 278
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 85/185 (45%), Gaps = 25/185 (13%)
Query: 54 NLPYARRIFDHLHSPNIYLYTS------------STFSLFRRMLCNSNPTTTRPNNFIYP 101
++ A ++FD + ++ + S +L+ M N +P+ F
Sbjct: 38 DVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM----NSKGIKPDGFTIV 93
Query: 102 HVLKSCHE--SRSTGA-VHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRE 158
+L +C + + + G VH ++K G + L+D Y+R G + A+ +FDEM +
Sbjct: 94 SLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYAR-CGRVEEAKTLFDEMVD 152
Query: 159 RNVVSFTAMISGYARVGDVDSALKLFDEMPERD--VP---SWNALIAGCTQNGFFSEGIR 213
+N VS+T++I G A G A++LF M + +P ++ ++ C+ G EG
Sbjct: 153 KNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFE 212
Query: 214 LFREM 218
FR M
Sbjct: 213 YFRRM 217
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 270 bits (691), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 148/462 (32%), Positives = 240/462 (51%), Gaps = 52/462 (11%)
Query: 59 RRIFDHLHSPNIYLYT--------SSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHES 110
RR+F+ + ++ Y S + RM+ T +P++F VL E
Sbjct: 196 RRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEY 255
Query: 111 RST---GAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAM 167
+H +++ G + + ++LVD Y++
Sbjct: 256 VDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKS------------------------- 290
Query: 168 ISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGY 227
AR+ D + ++F + RD SWN+L+AG QNG ++E +RLFR+MV
Sbjct: 291 ----ARIEDSE---RVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKV---- 339
Query: 228 RCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLAL 287
KP V + AC H + L LGK +HGYV + F + FI+++LVDMY KCGN+
Sbjct: 340 ---KPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKA 396
Query: 288 ARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNAC 347
ARK+F+ SW ++I ALHG A+++FE+M G V+P+ V FV +L AC
Sbjct: 397 ARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQG--VKPNQVAFVAVLTAC 454
Query: 348 THGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVV 407
+H GLV++ YF MT+ YG+ ++EHY + DLLGRAG+ +EA + M +EP V
Sbjct: 455 SHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSV 514
Query: 408 WGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQ 467
W +L + C V+ +LAE A+K+ +D N G +++ N+Y G+W E+ + +++
Sbjct: 515 WSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRK 574
Query: 468 QKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESLI 509
+ K P CSWIE+ ++ H F S D+S P +++ L++++
Sbjct: 575 KGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVM 616
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 109/373 (29%), Positives = 175/373 (46%), Gaps = 26/373 (6%)
Query: 62 FDHLHSPNIYLYTS-----STFSLFRRMLCN---SNPTTTRPNNFIYPHVLKSCH---ES 110
F L SP + + S + SLF + L + + P++ ++P VLKSC +
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 111 RSTGAVHAQIVKTGFEQYPIVQTALVDSYSR--GLGGLGNAEKVFDEMRERNVVSFTAMI 168
R +VH IV+ G + AL++ Y++ G+G + VFDEM +R S +
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 169 SGYARVGD--VDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERG 226
+ +DS ++F+ MP +DV S+N +IAG Q+G + + +R+ REM G
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREM-------G 234
Query: 227 YRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLA 286
KP+ TL L + GK IHGYV + D +I +SLVDMY K +
Sbjct: 235 TTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIE 294
Query: 287 LARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNA 346
+ +VF + SWNS++ + +G+ A+ +F QMV V+P V F ++ A
Sbjct: 295 DSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVT--AKVKPGAVAFSSVIPA 352
Query: 347 CTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEV 406
C H + G + R G I LVD+ + G A ++ M++ DEV
Sbjct: 353 CAHLATLHLGKQLHGYVLRG-GFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV-LDEV 410
Query: 407 VWGSLFNGCKVYG 419
W ++ G ++G
Sbjct: 411 SWTAIIMGHALHG 423
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 270 bits (691), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 142/401 (35%), Positives = 234/401 (58%), Gaps = 20/401 (4%)
Query: 117 HAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGD 176
H VK G V AL+D Y + G + +++F+E+ E++VVS+T ++ +
Sbjct: 134 HGVAVKMGVLTSVKVCNALMDMYGK-CGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEG 192
Query: 177 VDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKP-NPV 235
++ ++F EMPER+ +W ++AG GF E + L EMV +RC N V
Sbjct: 193 LERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMV-------FRCGHGLNFV 245
Query: 236 TLVCALSACGHTSMLQLGKWIHGYVYKNDFFV-------DSFISNSLVDMYGKCGNLALA 288
TL LSAC + L +G+W+H Y K + + D + +LVDMY KCGN+ +
Sbjct: 246 TLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSS 305
Query: 289 RKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACT 348
VF + + + +WN++ + A+HG+ I +F QM+ +V+PD +TF +L+AC+
Sbjct: 306 MNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIR---EVKPDDLTFTAVLSACS 362
Query: 349 HGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVW 408
H G+V++G F + R YG+EP+++HY C+VDLLGRAG +EA ++R M + P+EVV
Sbjct: 363 HSGIVDEGWRCFHSL-RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVL 421
Query: 409 GSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQ 468
GSL C V+G+ ++AE ++L+++ P N Y I+++N+Y G+ D + L+++
Sbjct: 422 GSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKR 481
Query: 469 KSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESLI 509
K+PG S I ++D VH+F S D+S P+ +E+Y L +I
Sbjct: 482 GIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVI 522
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 134/322 (41%), Gaps = 51/322 (15%)
Query: 166 AMISGYARVGDVDSALKLFDEMP--ERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAA 223
A+ YA G++ +A KLFDE+P E+D W L++ ++ G ++LF EM
Sbjct: 48 ALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRV 107
Query: 224 ERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCG 283
E + V++VC C L + HG K + N+L+DMYGKCG
Sbjct: 108 E-------IDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCG 160
Query: 284 NLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVE--------------- 328
++ +++FE +K + SW +++ E VF +M E
Sbjct: 161 LVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLG 220
Query: 329 -----------------CGGDVRPDGVTFVGLLNACTHGGLVEQG------CSYFEMMTR 365
CG + + VT +L+AC G + G EMM
Sbjct: 221 AGFTREVLELLAEMVFRCGHGL--NFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMG 278
Query: 366 EYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLA- 424
E + LVD+ + G D +M V R M + + V W +LF+G ++G+ +
Sbjct: 279 EEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMR-KRNVVTWNALFSGLAMHGKGRMVI 337
Query: 425 EFAAKKLLEIDPHNGGYGIMLA 446
+ + + E+ P + + +L+
Sbjct: 338 DMFPQMIREVKPDDLTFTAVLS 359
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 78/180 (43%), Gaps = 14/180 (7%)
Query: 241 LSACGHTSMLQLGKWIHGYVYKNDF--FVDSFISNSLVDMYGKCGNLALARKVFEMNP-- 296
L C H S L+ GK +H + + S++SN+L Y G + A+K+F+ P
Sbjct: 13 LRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLS 72
Query: 297 DKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTH---GGLV 353
+K W ++++ F+ +G ++ +F +M V D V+ V L C G
Sbjct: 73 EKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRR--KRVEIDDVSVVCLFGVCAKLEDLGFA 130
Query: 354 EQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFN 413
+QG + + G+ ++ L+D+ G+ G E + + E V W + +
Sbjct: 131 QQG----HGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELE-EKSVVSWTVVLD 185
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 162/474 (34%), Positives = 241/474 (50%), Gaps = 32/474 (6%)
Query: 51 TLSNLPYARRIFDHLHSPNIYLYT------------SSTFSLFRRMLCNSNPTTTRPNNF 98
+L + ++FD + ++ + +F+RM S + + +
Sbjct: 93 SLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRM---SQESNLKFDEG 149
Query: 99 IYPHVLKSCHESRS--TGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEM 156
L +C ++ G + V T FE + ALVD + + G L A VFD M
Sbjct: 150 TIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGNALVDMFCK-CGCLDKARAVFDSM 208
Query: 157 RERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFR 216
R++NV +T+M+ GY G +D A LF+ P +DV W A++ G Q F E + LFR
Sbjct: 209 RDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFR 268
Query: 217 EMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLV 276
M +P+ LV L+ C T L+ GKWIHGY+ +N VD + +LV
Sbjct: 269 CMQTAGI-------RPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALV 321
Query: 277 DMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPD 336
DMY KCG + A +VF ++ SW S+I A++G S A+ ++ +M G VR D
Sbjct: 322 DMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVG--VRLD 379
Query: 337 GVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVV 396
+TFV +L AC HGG V +G F MT + ++P+ EH CL+DLL RAG DEA E++
Sbjct: 380 AITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELI 439
Query: 397 RGMSMEPDEV---VWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELG 453
M E DE V+ SL + + YG +AE A+KL +++ + +LA+VY
Sbjct: 440 DKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASAN 499
Query: 454 KWDEVRNVWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQ--SSPKAEELYSVL 505
+W++V NV R +K K PGCS IEID H+F D S PK +E+ S+L
Sbjct: 500 RWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEINSML 553
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 152/363 (41%), Gaps = 75/363 (20%)
Query: 95 PNNFIYPHVLKSCHESRST---GAVHAQIVKTGFEQYPIVQTALVDSY-SRGLGGLGNAE 150
P+NF P VLKS R VH VK G E DSY S L G+
Sbjct: 44 PDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLE---------FDSYVSNSLMGM---- 90
Query: 151 KVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSE 210
YA +G ++ K+FDEMP+RDV SWN LI+ NG F +
Sbjct: 91 --------------------YASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFED 130
Query: 211 GIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSF 270
I +F+ M + E + ++ T+V LSAC L++G+ I+ +V +F +
Sbjct: 131 AIGVFKRM---SQESNLKFDEG---TIVSTLSACSALKNLEIGERIYRFVV-TEFEMSVR 183
Query: 271 ISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFE------ 324
I N+LVDM+ KCG L AR VF+ DK + W SM+ + G+ + A +FE
Sbjct: 184 IGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKD 243
Query: 325 ---------------------QMVEC--GGDVRPDGVTFVGLLNACTHGGLVEQGCSYFE 361
++ C +RPD V LL C G +EQG +
Sbjct: 244 VVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQG-KWIH 302
Query: 362 MMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRT 421
E + LVD+ + G + A+EV + E D W SL G + G +
Sbjct: 303 GYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIK-ERDTASWTSLIYGLAMNGMS 361
Query: 422 DLA 424
A
Sbjct: 362 GRA 364
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 124/253 (49%), Gaps = 9/253 (3%)
Query: 215 FREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNS 274
F +++AL E + P+ TL L + G + G+ +HGY K DS++SNS
Sbjct: 27 FTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNS 86
Query: 275 LVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVR 334
L+ MY G + + KVF+ P + + SWN +I+ + +G+ E AI VF++M + +++
Sbjct: 87 LMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQ-ESNLK 145
Query: 335 PDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAME 394
D T V L+AC+ +E G + + E+ + +I + LVD+ + G D+A
Sbjct: 146 FDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGN--ALVDMFCKCGCLDKARA 203
Query: 395 VVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDP-HNGGYGIMLANVYGELG 453
V M + + W S+ G GR D A+ L E P + + N Y +
Sbjct: 204 VFDSMR-DKNVKCWTSMVFGYVSTGRID----EARVLFERSPVKDVVLWTAMMNGYVQFN 258
Query: 454 KWDEVRNVWRILK 466
++DE ++R ++
Sbjct: 259 RFDEALELFRCMQ 271
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 269 bits (688), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 160/507 (31%), Positives = 275/507 (54%), Gaps = 34/507 (6%)
Query: 19 LNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLS-NLPYARRIFDHLHSPNIYLYTSST 77
++ L ++ L TLG + + + + + F AL+ S ++ YA + L P Y
Sbjct: 21 MSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNY-----G 75
Query: 78 FSLFRRMLCNS-NPTTT------------RPNNFIYPHVLKSCHE---SRSTGAVHAQIV 121
++ R NS NP + P++ YP ++KS + G++H +V
Sbjct: 76 WNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVV 135
Query: 122 KTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSAL 181
K+G E + L+ Y +A K+FDEM +N+V++ +++ YA+ GDV SA
Sbjct: 136 KSGLEWDLFICNTLIHMYG-SFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSAR 194
Query: 182 KLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCAL 241
+FDEM ERDV +W+++I G + G +++ + +F +M+ + + +K N VT+V +
Sbjct: 195 LVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGS------SKANEVTMVSVI 248
Query: 242 SACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLT 301
AC H L GK +H Y+ + + SL+DMY KCG++ A VF K
Sbjct: 249 CACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETD 308
Query: 302 S--WNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSY 359
+ WN++I A HG ++ +F +M E D PD +TF+ LL AC+HGGLV++ +
Sbjct: 309 ALMWNAIIGGLASHGFIRESLQLFHKMRESKID--PDEITFLCLLAACSHGGLVKEAWHF 366
Query: 360 FEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYG 419
F+ + +E G EP+ EHY C+VD+L RAG +A + + M ++P + G+L NGC +G
Sbjct: 367 FKSL-KESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHG 425
Query: 420 RTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVPGCSWI 479
+LAE KKL+E+ PHN G + LANVY ++ R++ ++++ K+ G S +
Sbjct: 426 NLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSIL 485
Query: 480 EIDDQVHQFFSLDQSSPKAEELYSVLE 506
++D H+F + D++ ++++Y+VL+
Sbjct: 486 DLDGTRHRFIAHDKTHFHSDKIYAVLQ 512
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 269 bits (688), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 160/517 (30%), Positives = 267/517 (51%), Gaps = 67/517 (12%)
Query: 19 LNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSPNIYLYTS--- 75
+ L+Q+ AHL G+ + KL+ A + + Y +F + P+ +L+ S
Sbjct: 22 VKQLQQVHAHLIVTGYGRSRSLLTKLITL-ACSARAIAYTHLLFLSVPLPDDFLFNSVIK 80
Query: 76 STFSL---------FRRMLCNSNPTTTRPNNFIYPHVLKSCHES---RSTGAVHAQIVKT 123
ST L +RRML + P+N+ + V+KSC + R VH V +
Sbjct: 81 STSKLRLPLHCVAYYRRML----SSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVS 136
Query: 124 GFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKL 183
GF VQ ALV YS+ GD++ A ++
Sbjct: 137 GFGLDTYVQAALVTFYSK--------------------------------CGDMEGARQV 164
Query: 184 FDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSA 243
FD MPE+ + +WN+L++G QNG E I++F +M E G+ +P+ T V LSA
Sbjct: 165 FDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQM----RESGF---EPDSATFVSLLSA 217
Query: 244 CGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSW 303
C T + LG W+H Y+ ++ + +L+++Y +CG++ AR+VF+ + + +W
Sbjct: 218 CAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAW 277
Query: 304 NSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMM 363
+MI+ + HG + A+ +F +M + G + P+ VTFV +L+AC H GLVE+G S ++ M
Sbjct: 278 TAMISAYGTHGYGQQAVELFNKMEDDCGPI-PNNVTFVAVLSACAHAGLVEEGRSVYKRM 336
Query: 364 TREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVR-----GMSMEPDEVVWGSLFNGCKVY 418
T+ Y + P +EH+ C+VD+LGRAG DEA + + G + P +W ++ CK++
Sbjct: 337 TKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAP--ALWTAMLGACKMH 394
Query: 419 GRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVPGCSW 478
DL AK+L+ ++P N G+ +ML+N+Y GK DEV ++ + + K G S
Sbjct: 395 RNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSV 454
Query: 479 IEIDDQVHQFFSLDQSSPKAEELYSVLESLIGFGNEV 515
IE++++ + F D+S + E+Y LE+LI E+
Sbjct: 455 IEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEI 491
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 268 bits (685), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 144/431 (33%), Positives = 234/431 (54%), Gaps = 38/431 (8%)
Query: 58 ARRIFDHLHSPNIYLYTSSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTGAVH 117
AR IFD + N+ +T+ T R NN + V
Sbjct: 191 ARLIFDEMRERNVVTWTTMI-------------TGYRQNNRV---------------DVA 222
Query: 118 AQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDV 177
++ + E+ + T+++ Y+ G + +AE+ F+ M + V++ AMI G+ VG++
Sbjct: 223 RKLFEVMPEKTEVSWTSMLLGYTLS-GRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEI 281
Query: 178 DSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTL 237
A ++FD M +RD +W +I + GF E + LF +M ++G R P+ +L
Sbjct: 282 SKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQM----QKQGVR---PSFPSL 334
Query: 238 VCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPD 297
+ LS C + LQ G+ +H ++ + F D ++++ L+ MY KCG L A+ VF+
Sbjct: 335 ISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSS 394
Query: 298 KGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGC 357
K + WNS+I+ +A HG E A+ +F +M G P+ VT + +L AC++ G +E+G
Sbjct: 395 KDIIMWNSIISGYASHGLGEEALKIFHEMPSSG--TMPNKVTLIAILTACSYAGKLEEGL 452
Query: 358 SYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKV 417
FE M ++ + P +EHY C VD+LGRAG+ D+AME++ M+++PD VWG+L CK
Sbjct: 453 EIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKT 512
Query: 418 YGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVPGCS 477
+ R DLAE AAKKL E +P N G ++L+++ KW +V V + ++ K PGCS
Sbjct: 513 HSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCS 572
Query: 478 WIEIDDQVHQF 488
WIE+ +VH F
Sbjct: 573 WIEVGKKVHMF 583
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 146/331 (44%), Gaps = 27/331 (8%)
Query: 126 EQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFD 185
E+ + TA+V Y + G +G AE +F M ERN VS+T M G G +D A KL+D
Sbjct: 107 ERNVVSWTAMVKGYMQE-GMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYD 165
Query: 186 EMPERDVPSWNALIAGCTQNGFFSEGIRLFREM------VALAAERGYRCNKPNPVT--- 236
MP +DV + +I G + G E +F EM GYR N V
Sbjct: 166 MMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKL 225
Query: 237 --LVCALSACGHTSMLQLGKWIHGYVYKNDFFVD------SFISNSLVDMYGKCGNLALA 288
++ + TSML LG + G + + F + N+++ +G+ G ++ A
Sbjct: 226 FEVMPEKTEVSWTSML-LGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKA 284
Query: 289 RKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACT 348
R+VF++ D+ +W MI + G A+ +F QM + G VRP + + +L+ C
Sbjct: 285 RRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQG--VRPSFPSLISILSVCA 342
Query: 349 HGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVW 408
++ G + R + + L+ + + G +A V S D ++W
Sbjct: 343 TLASLQYGRQVHAHLVR-CQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFS-SKDIIMW 400
Query: 409 GSLFNGCKVYGRTDLAEFAAKKLLEIDPHNG 439
S+ +G Y L E A K E+ P +G
Sbjct: 401 NSIISG---YASHGLGEEALKIFHEM-PSSG 427
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 117/272 (43%), Gaps = 30/272 (11%)
Query: 149 AEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFF 208
A ++FDEM ERNVVS+ ++SGY + + A +F+ MPER+V SW A++ G Q G
Sbjct: 67 ARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMV 126
Query: 209 SEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVD 268
E LF +R + N V+ + + ++ + D
Sbjct: 127 GEAESLF-----------WRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVA- 174
Query: 269 SFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVE 328
S +++ + G + AR +F+ ++ + +W +MI + + + + A +FE M E
Sbjct: 175 ---STNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPE 231
Query: 329 CGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGR 388
V++ +L T G +E +FE+M ++P I +V G G
Sbjct: 232 ------KTEVSWTSMLLGYTLSGRIEDAEEFFEVMP----MKPVIACNAMIVG-FGEVGE 280
Query: 389 FDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGR 420
+A V M + D W + K Y R
Sbjct: 281 ISKARRVFDLME-DRDNATWRGMI---KAYER 308
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 116/263 (44%), Gaps = 30/263 (11%)
Query: 143 LGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGC 202
+G + A K FD ++ + + S+ +++SGY G A +LFDEM ER+V SWN L++G
Sbjct: 30 IGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGY 89
Query: 203 TQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYK 262
+N E R + L ER N V+ + M+ + + + +
Sbjct: 90 IKNRMIVEA----RNVFELMPER-------NVVSWTAMVKGYMQEGMVGEAESLFWRMPE 138
Query: 263 NDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAV 322
+ + + L+D G + ARK+++M P K + + +MI G+ + A +
Sbjct: 139 RNEVSWTVMFGGLID----DGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLI 194
Query: 323 FEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDL 382
F++M E + VT+ ++ V+ FE+M P+ L
Sbjct: 195 FDEMRE------RNVVTWTTMITGYRQNNRVDVARKLFEVM-------PEKTEVSWTSML 241
Query: 383 LGR--AGRFDEAMEVVRGMSMEP 403
LG +GR ++A E M M+P
Sbjct: 242 LGYTLSGRIEDAEEFFEVMPMKP 264
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 143/434 (32%), Positives = 234/434 (53%), Gaps = 49/434 (11%)
Query: 115 AVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISG---- 170
A+H I++ V+T L+D Y + G L A VFD M +N+V++ +++SG
Sbjct: 246 AIHGYILRNQLWYDVYVETTLIDMYIK-TGYLPYARMVFDMMDAKNIVAWNSLVSGLSYA 304
Query: 171 -------------------------------YARVGDVDSALKLFDEMPER----DVPSW 195
YA +G + AL + +M E+ +V SW
Sbjct: 305 CLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSW 364
Query: 196 NALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKW 255
A+ +GC++NG F +++F +M E G PN T+ L G S+L GK
Sbjct: 365 TAIFSGCSKNGNFRNALKVFIKM----QEEGV---GPNAATMSTLLKILGCLSLLHSGKE 417
Query: 256 IHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQ 315
+HG+ + + D++++ +LVDMYGK G+L A ++F +K L SWN M+ +A+ G+
Sbjct: 418 VHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGR 477
Query: 316 SEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEH 375
E IA F M+E G + PD +TF +L+ C + GLV++G YF++M YGI P IEH
Sbjct: 478 GEEGIAAFSVMLEAG--MEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEH 535
Query: 376 YGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEID 435
C+VDLLGR+G DEA + ++ MS++PD +WG+ + CK++ +LAE A K+L ++
Sbjct: 536 CSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLE 595
Query: 436 PHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSS 495
PHN +M+ N+Y L +W++V + +++ + SWI+ID VH F++ ++
Sbjct: 596 PHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTH 655
Query: 496 PKAEELYSVLESLI 509
P ++Y L L+
Sbjct: 656 PDEGDIYFELYKLV 669
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 171/349 (48%), Gaps = 25/349 (7%)
Query: 116 VHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVG 175
+H +++ G E + +L+ YSR G L + KVF+ M++RN+ S+ +++S Y ++G
Sbjct: 111 IHGYVLRLGLESNVSMCNSLIVMYSRN-GKLELSRKVFNSMKDRNLSSWNSILSSYTKLG 169
Query: 176 DVDSALKLFDEMP----ERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNK 231
VD A+ L DEM + D+ +WN+L++G G + I + + M K
Sbjct: 170 YVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGL-------K 222
Query: 232 PNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKV 291
P+ ++ L A L+LGK IHGY+ +N + D ++ +L+DMY K G L AR V
Sbjct: 223 PSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMV 282
Query: 292 FEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGG 351
F+M K + +WNS+++ + + A A+ +M + G ++PD +T+ L + G
Sbjct: 283 FDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEG--IKPDAITWNSLASGYATLG 340
Query: 352 LVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSME---PDEVVW 408
E+ M +E G+ P + + + + G F A++V M E P+
Sbjct: 341 KPEKALDVIGKM-KEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATM 399
Query: 409 GSLFN--GC--KVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELG 453
+L GC ++ ++ F +K L D + L ++YG+ G
Sbjct: 400 STLLKILGCLSLLHSGKEVHGFCLRKNLICDAY---VATALVDMYGKSG 445
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 113/225 (50%), Gaps = 10/225 (4%)
Query: 165 TAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAE 224
+A + Y R + A KLFDEMP+RD +WN ++ ++G + + + LFREM A
Sbjct: 27 SASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGA- 85
Query: 225 RGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGN 284
K T+V L C + G+ IHGYV + + + NSL+ MY + G
Sbjct: 86 ------KAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGK 139
Query: 285 LALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLL 344
L L+RKVF D+ L+SWNS+++ + G + AI + ++M CG ++PD VT+ LL
Sbjct: 140 LELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICG--LKPDIVTWNSLL 197
Query: 345 NACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRF 389
+ GL + + + M + G++P L+ + G
Sbjct: 198 SGYASKGLSKDAIAVLKRM-QIAGLKPSTSSISSLLQAVAEPGHL 241
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 75/174 (43%), Gaps = 5/174 (2%)
Query: 252 LGKWIHGYVYKNDF-FVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCF 310
LG IHG + K D+ + ++ + YG+C +L A K+F+ P + +WN ++
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 311 ALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIE 370
G E A+ +F +M G T V LL C++ +G + R G+E
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDS--TMVKLLQVCSNKEGFAEGRQIHGYVLR-LGLE 121
Query: 371 PQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLA 424
+ L+ + R G+ + + +V M + + W S+ + G D A
Sbjct: 122 SNVSMCNSLIVMYSRNGKLELSRKVFNSMK-DRNLSSWNSILSSYTKLGYVDDA 174
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 146/416 (35%), Positives = 228/416 (54%), Gaps = 34/416 (8%)
Query: 94 RPNNFIYPHVLKSCHESRSTGAV-HAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKV 152
+PN VL C S GA+ H + + +YPI D G G
Sbjct: 362 KPNEVTLISVLSGC---ASVGALMHGKEIHCYAIKYPI------DLRKNGHG-------- 404
Query: 153 FDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMP--ERDVPSWNALIAGCTQNGFFSE 210
+ N+V +I YA+ VD+A +FD + ERDV +W +I G +Q+G ++
Sbjct: 405 -----DENMV-INQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANK 458
Query: 211 GIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKND-FFVDS 269
+ L EM + +PN T+ CAL AC + L++GK IH Y +N V
Sbjct: 459 ALELLSEMFEEDCQ-----TRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPL 513
Query: 270 FISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVEC 329
F+SN L+DMY KCG+++ AR VF+ K +W S++ + +HG E A+ +F++M
Sbjct: 514 FVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRI 573
Query: 330 GGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRF 389
G + DGVT + +L AC+H G+++QG YF M +G+ P EHY CLVDLLGRAGR
Sbjct: 574 G--FKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRL 631
Query: 390 DEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVY 449
+ A+ ++ M MEP VVW + + C+++G+ +L E+AA+K+ E+ ++ G +L+N+Y
Sbjct: 632 NAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLY 691
Query: 450 GELGKWDEVRNVWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVL 505
G+W +V + +++ + K PGCSW+E FF D++ P A+E+Y VL
Sbjct: 692 ANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVL 747
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 183/394 (46%), Gaps = 40/394 (10%)
Query: 54 NLPYARRIFDHLHSPNIYLYTS------------STFSLFRRMLCNSNPTTTRPNNFIYP 101
+L AR++FD + ++ + S +F RM +N RP+N
Sbjct: 177 SLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRM---TNEFGCRPDNITLV 233
Query: 102 HVLKSCHE--SRSTGA-VHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRE 158
+VL C + S G +H V + Q V LVD Y++ G + A VF M
Sbjct: 234 NVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAK-CGMMDEANTVFSNMSV 292
Query: 159 RNVVSFTAMISGYARVGDVDSALKLFDEMPER----DVPSWNALIAGCTQNGFFSEGIRL 214
++VVS+ AM++GY+++G + A++LF++M E DV +W+A I+G Q G E + +
Sbjct: 293 KDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGV 352
Query: 215 FREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGY-------VYKNDFFV 267
R+M++ KPN VTL+ LS C L GK IH Y + KN
Sbjct: 353 CRQMLSSGI-------KPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGD 405
Query: 268 DSFISNSLVDMYGKCGNLALARKVFE-MNP-DKGLTSWNSMINCFALHGQSEGAIAVFEQ 325
++ + N L+DMY KC + AR +F+ ++P ++ + +W MI ++ HG + A+ + +
Sbjct: 406 ENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSE 465
Query: 326 MVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGR 385
M E RP+ T L AC + G R + CL+D+ +
Sbjct: 466 MFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAK 525
Query: 386 AGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYG 419
G +A V M M +EV W SL G ++G
Sbjct: 526 CGSISDARLVFDNM-MAKNEVTWTSLMTGYGMHG 558
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 152/385 (39%), Gaps = 83/385 (21%)
Query: 95 PNNFIYPHVLKSCHE---SRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEK 151
P+N+ +P V K+C E R + HA + TGF
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFIS------------------------ 160
Query: 152 VFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEG 211
NV A+++ Y+R + A K+FDEM DV SWN++I + G
Sbjct: 161 --------NVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVA 212
Query: 212 IRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFI 271
+ +F M E G R P+ +TLV L C LGK +H + ++ + F+
Sbjct: 213 LEMFSRMTN---EFGCR---PDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFV 266
Query: 272 SNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVE--- 328
N LVDMY KCG + A VF K + SWN+M+ ++ G+ E A+ +FE+M E
Sbjct: 267 GNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKI 326
Query: 329 ------------------------------CGGDVRPDGVTFVGLLNACTHGGLVEQGCS 358
++P+ VT + +L+ C G + G
Sbjct: 327 KMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHG-K 385
Query: 359 YFEMMTREYGIEPQIEHYG-------CLVDLLGRAGRFDEAMEVVRGMS-MEPDEVVWGS 410
+Y I+ + +G L+D+ + + D A + +S E D V W
Sbjct: 386 EIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTV 445
Query: 411 LFNGCKVYGRTDLAEFAAKKLLEID 435
+ G +G + A ++ E D
Sbjct: 446 MIGGYSQHGDANKALELLSEMFEED 470
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 123/269 (45%), Gaps = 12/269 (4%)
Query: 167 MISGYARVGDVDSALKLFDEMPERD--VPSWNALIAGCTQNGFFSEGIRLFREMVALAAE 224
+IS Y VG + A+ L P D V WN+LI NG ++ + LF M +L+
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSW- 123
Query: 225 RGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGN 284
P+ T ACG S ++ G+ H F + F+ N+LV MY +C +
Sbjct: 124 ------TPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRS 177
Query: 285 LALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLL 344
L+ ARKVF+ + SWNS+I +A G+ + A+ +F +M G RPD +T V +L
Sbjct: 178 LSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFG-CRPDNITLVNVL 236
Query: 345 NACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPD 404
C G G I+ CLVD+ + G DEA V MS++ D
Sbjct: 237 PPCASLGTHSLGKQLHCFAVTSEMIQNMFVG-NCLVDMYAKCGMMDEANTVFSNMSVK-D 294
Query: 405 EVVWGSLFNGCKVYGRTDLAEFAAKKLLE 433
V W ++ G GR + A +K+ E
Sbjct: 295 VVSWNAMVAGYSQIGRFEDAVRLFEKMQE 323
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 266 bits (680), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 164/523 (31%), Positives = 279/523 (53%), Gaps = 35/523 (6%)
Query: 7 EQVLTILGKSNHLNHLKQLQAHLTTLGHAHTDFYAF-KLVRFCALTLSNLPYARRIFDHL 65
+ L ++ S+ L+ +KQ+ H+ G Y + LV+F + L N A ++F +
Sbjct: 134 QTFLYLMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKF-YMELGNFGVAEKVFARM 192
Query: 66 HSPN-------IYLYTSSTFSL-----FRRMLCNSNPTTTRPNNFIYPHVLKSC---HES 110
P+ I Y FSL + +M+ + P+ + +L C +
Sbjct: 193 PHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDG----IEPDEYTVLSLLVCCGHLSDI 248
Query: 111 RSTGAVHAQIVKTG--FEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMI 168
R VH I + G + I+ AL+D Y + G A++ FD M+++++ S+ M+
Sbjct: 249 RLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKES-GLAKRAFDAMKKKDMRSWNTMV 307
Query: 169 SGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIR-LFREMVALAAERGY 227
G+ R+GD+++A +FD+MP+RD+ SWN+L+ G ++ G +R LF EM +
Sbjct: 308 VGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKV--- 364
Query: 228 RCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLAL 287
KP+ VT+V +S + L G+W+HG V + D+F+S++L+DMY KCG +
Sbjct: 365 ---KPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIER 421
Query: 288 ARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNAC 347
A VF+ +K + W SMI A HG + A+ +F +M E G V P+ VT + +L AC
Sbjct: 422 AFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEG--VTPNNVTLLAVLTAC 479
Query: 348 THGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVV-RGMSMEPDEV 406
+H GLVE+G F M ++G +P+ EHYG LVDLL RAGR +EA ++V + M M P +
Sbjct: 480 SHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQS 539
Query: 407 VWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILK 466
+WGS+ + C+ + AE A +LL+++P G ++L+N+Y +G+W ++
Sbjct: 540 MWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAME 599
Query: 467 QQKSYKVPGCSWIEIDDQVHQFFSLD-QSSPKAEELYSVLESL 508
+ K G S + + +H+F + + Q+ P+ E+ +L+ L
Sbjct: 600 NRGVKKTAGYSSVVGVEGLHRFVAAEKQNHPRWTEIKRILQHL 642
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 120/462 (25%), Positives = 192/462 (41%), Gaps = 91/462 (19%)
Query: 4 NLNEQVLTILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTL-SNLPYARRIF 62
LN Q L +L N N KQ+ A + F +L+ F A+T NL A+ +F
Sbjct: 32 QLNHQSLVLLENCNSRNQFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLLF 91
Query: 63 -DHLHSPNIYLYTS----------STFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESR 111
+ +PN+++Y + F L+ M+ + P+ + +++K+
Sbjct: 92 LNFTPNPNVFVYNTMISAVSSSKNECFGLYSSMIRHR----VSPDRQTFLYLMKASSFLS 147
Query: 112 STGAVHAQIVKTG-FEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISG 170
+H I+ +G + +LV Y LG G AEKVF M +V SF MI G
Sbjct: 148 EVKQIHCHIIVSGCLSLGNYLWNSLVKFYME-LGNFGVAEKVFARMPHPDVSSFNVMIVG 206
Query: 171 YARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCN 230
YA+ G ALKL+ +M S+GI
Sbjct: 207 YAKQGFSLEALKLYFKM--------------------VSDGI------------------ 228
Query: 231 KPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDS--FISNSLVDMYGKCGNLALA 288
+P+ T++ L CGH S ++LGK +HG++ + S +SN+L+DMY KC LA
Sbjct: 229 EPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLA 288
Query: 289 RKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQM---------------VECGGD- 332
++ F+ K + SWN+M+ F G E A AVF+QM + G D
Sbjct: 289 KRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQ 348
Query: 333 ---------------VRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYG 377
V+PD VT V L++ + G + G ++ R ++
Sbjct: 349 RTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIR-LQLKGDAFLSS 407
Query: 378 CLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYG 419
L+D+ + G + A V + + E D +W S+ G +G
Sbjct: 408 ALIDMYCKCGIIERAFMVFK-TATEKDVALWTSMITGLAFHG 448
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 144/417 (34%), Positives = 227/417 (54%), Gaps = 45/417 (10%)
Query: 94 RPNNFIYPHVLKSCHESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVF 153
RPN F Y +L + S VHAQ+VKT +E+ V TAL+D+
Sbjct: 394 RPNEFTYSVILTAL-PVISPSEVHAQVVKTNYERSSTVGTALLDA--------------- 437
Query: 154 DEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIR 213
Y ++G V+ A K+F + ++D+ +W+A++AG Q G I+
Sbjct: 438 -----------------YVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIK 480
Query: 214 LFREMVALAAERGYRCNKPNPVTLVCALSACGHT--SMLQLGKWIHGYVYKNDFFVDSFI 271
+F E+ KPN T L+ C T SM Q GK HG+ K+ +
Sbjct: 481 MFGELTKGGI-------KPNEFTFSSILNVCAATNASMGQ-GKQFHGFAIKSRLDSSLCV 532
Query: 272 SNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGG 331
S++L+ MY K GN+ A +VF+ +K L SWNSMI+ +A HGQ+ A+ VF++M +
Sbjct: 533 SSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKK--R 590
Query: 332 DVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDE 391
V+ DGVTF+G+ ACTH GLVE+G YF++M R+ I P EH C+VDL RAG+ ++
Sbjct: 591 KVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEK 650
Query: 392 AMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGE 451
AM+V+ M +W ++ C+V+ +T+L AA+K++ + P + ++L+N+Y E
Sbjct: 651 AMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAE 710
Query: 452 LGKWDEVRNVWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESL 508
G W E V +++ ++ K PG SWIE+ ++ + F + D+S P +++Y LE L
Sbjct: 711 SGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDL 767
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 167/392 (42%), Gaps = 76/392 (19%)
Query: 50 LTLSNLPYARRIFDHLHSPNIYLYTS------------STFSLFRRMLCNSNPTTTRPNN 97
L N+ AR +FD ++ + S +F M N R +
Sbjct: 240 LKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLN----YVRLSE 295
Query: 98 FIYPHVLKSC---HESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFD 154
+ V+K C E R T +H +VK GF ++TAL+ +YS+
Sbjct: 296 SSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKC------------ 343
Query: 155 EMRERNVVSFTAMISGYARVGDVDSALKLFDEMP-ERDVPSWNALIAGCTQNGFFSEGIR 213
TAM+ AL+LF E+ +V SW A+I+G QN E +
Sbjct: 344 ----------TAMLD----------ALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVD 383
Query: 214 LFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISN 273
LF EM +G R PN T L+A S + +H V K ++ S +
Sbjct: 384 LFSEM----KRKGVR---PNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGT 432
Query: 274 SLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDV 333
+L+D Y K G + A KVF DK + +W++M+ +A G++E AI +F ++ + G +
Sbjct: 433 ALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTK--GGI 490
Query: 334 RPDGVTFVGLLNACTH-GGLVEQGCSYFEMMTREYGIEPQIEHYGC----LVDLLGRAGR 388
+P+ TF +LN C + QG + + I+ +++ C L+ + + G
Sbjct: 491 KPNEFTFSSILNVCAATNASMGQGKQF-----HGFAIKSRLDSSLCVSSALLTMYAKKGN 545
Query: 389 FDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGR 420
+ A EV + E D V W S+ +G +G+
Sbjct: 546 IESAEEVFK-RQREKDLVSWNSMISGYAQHGQ 576
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 157/390 (40%), Gaps = 71/390 (18%)
Query: 53 SNLPYARRIFDHLHSPNIYLYTS------------STFSLFRRMLCNSNPTTTRPNNFIY 100
SN R++FD + N+ +T+ +LF RM T+PN+F +
Sbjct: 142 SNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRM----QNEGTQPNSFTF 197
Query: 101 PHVLKSCHESRSTG---AVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMR 157
L E G VH +VK G ++ V +L++ Y
Sbjct: 198 AAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLY------------------ 239
Query: 158 ERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFRE 217
+ G+V A LFD+ + V +WN++I+G NG E + +F
Sbjct: 240 --------------LKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYS 285
Query: 218 MVALAAERGYRCN--KPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSL 275
M R N + + + + C + L+ + +H V K F D I +L
Sbjct: 286 M---------RLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTAL 336
Query: 276 VDMYGKCGNLALARKVF-EMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVR 334
+ Y KC + A ++F E+ + SW +MI+ F + E A+ +F +M G VR
Sbjct: 337 MVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG--VR 394
Query: 335 PDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAME 394
P+ T+ +L A ++ + +++ Y + L+D + G+ +EA +
Sbjct: 395 PNEFTYSVILTALP---VISPSEVHAQVVKTNYERSSTVGT--ALLDAYVKLGKVEEAAK 449
Query: 395 VVRGMSMEPDEVVWGSLFNGCKVYGRTDLA 424
V G+ + D V W ++ G G T+ A
Sbjct: 450 VFSGID-DKDIVAWSAMLAGYAQTGETEAA 478
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 117/292 (40%), Gaps = 52/292 (17%)
Query: 47 FCALTLSNLPYARRIFDHLHSPNIYLYTSSTFSLFR--------RMLCNSNPTTTRPNNF 98
F ++ S L A +FD + Y S F R R+ N + +
Sbjct: 35 FGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCS 94
Query: 99 IYPHVLKS----CHESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFD 154
I+ VLK C E +H Q +K GF V T+LVD+Y +G
Sbjct: 95 IFSSVLKVSATLCDELFGR-QLHCQCIKFGFLDDVSVGTSLVDTYMKG------------ 141
Query: 155 EMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRL 214
+ K+FDEM ER+V +W LI+G +N E + L
Sbjct: 142 --------------------SNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTL 181
Query: 215 FREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNS 274
F M + PN T AL + G +H V KN +SNS
Sbjct: 182 FMRMQNEGTQ-------PNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNS 234
Query: 275 LVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQM 326
L+++Y KCGN+ AR +F+ K + +WNSMI+ +A +G A+ +F M
Sbjct: 235 LINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSM 286
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 108/236 (45%), Gaps = 11/236 (4%)
Query: 179 SALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLV 238
+A LFD+ P RD S+ +L+ G +++G E RLF + L E C+ + V V
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGME--MDCSIFSSVLKV 102
Query: 239 CALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDK 298
A + C G+ +H K F D + SLVD Y K N RKVF+ ++
Sbjct: 103 SA-TLCDEL----FGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKER 157
Query: 299 GLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCS 358
+ +W ++I+ +A + ++ + +F +M G +P+ TF L G+ +G
Sbjct: 158 NVVTWTTLISGYARNSMNDEVLTLFMRMQNEG--TQPNSFTFAAALGVLAEEGVGGRGLQ 215
Query: 359 YFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNG 414
++ + G++ I L++L + G +A ++ + V W S+ +G
Sbjct: 216 VHTVVVKN-GLDKTIPVSNSLINLYLKCGNVRKA-RILFDKTEVKSVVTWNSMISG 269
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 266 bits (679), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 151/467 (32%), Positives = 248/467 (53%), Gaps = 42/467 (8%)
Query: 55 LPYARRIFDHLHSPNIYLYTS------------STFSLFRRMLCNSNPTTTRPNNFIYPH 102
L A R+FD + + + + T LF ML + P+ F +
Sbjct: 433 LAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSML----RSRIEPDEFTFGS 488
Query: 103 VLKSCHESRSTG---AVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRER 159
+LK+C S G +H+ IVK+G V +L+D YS+ G + AEK+ +R
Sbjct: 489 ILKAC-TGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSK-CGMIEEAEKIHSRFFQR 546
Query: 160 NVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMV 219
VS G ++ K+ ++ + SWN++I+G + LF M+
Sbjct: 547 ANVS-----------GTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMM 595
Query: 220 ALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMY 279
+ P+ T L C + + LGK IH V K + D +I ++LVDMY
Sbjct: 596 EMGI-------TPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMY 648
Query: 280 GKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVT 339
KCG+L +R +FE + + +WN+MI +A HG+ E AI +FE+M+ +++P+ VT
Sbjct: 649 SKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMIL--ENIKPNHVT 706
Query: 340 FVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGM 399
F+ +L AC H GL+++G YF MM R+YG++PQ+ HY +VD+LG++G+ A+E++R M
Sbjct: 707 FISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREM 766
Query: 400 SMEPDEVVWGSLFNGCKVY-GRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEV 458
E D+V+W +L C ++ ++AE A LL +DP + +L+NVY + G W++V
Sbjct: 767 PFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKV 826
Query: 459 RNVWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVL 505
++ R ++ K K PGCSW+E+ D++H F D++ P+ EE+Y L
Sbjct: 827 SDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEEL 873
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 163/358 (45%), Gaps = 27/358 (7%)
Query: 158 ERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFRE 217
+ +VV+ +A++ YA+ +L++F +PE++ SW+A+IAGC QN S ++ F+E
Sbjct: 212 DTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKE 271
Query: 218 MVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVD 277
M + A + L +C S L+LG +H + K+DF D + + +D
Sbjct: 272 MQKVNA-------GVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLD 324
Query: 278 MYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDG 337
MY KC N+ A+ +F+ + + S+N+MI ++ A+ +F +++ G + D
Sbjct: 325 MYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSG--LGFDE 382
Query: 338 VTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVR 397
++ G+ AC + +G + + + + + +D+ G+ EA V
Sbjct: 383 ISLSGVFRACALVKGLSEGLQIYGLAIKS-SLSLDVCVANAAIDMYGKCQALAEAFRVFD 441
Query: 398 GMSMEPDEVVWGSLFNGCKVYGR--TDLAEFAAKKLLEIDPHNGGYG-IMLANVYGELGK 454
M D V W ++ + G+ L F + I+P +G I+ A G LG
Sbjct: 442 EMR-RRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGY 500
Query: 455 WDEVRNVWRILKQ-QKSYKVPGCSWIEI---------DDQVH-QFFSLDQSSPKAEEL 501
E+ + I+K S GCS I++ +++H +FF S EEL
Sbjct: 501 GMEIHS--SIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEEL 556
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 128/287 (44%), Gaps = 11/287 (3%)
Query: 62 FDHLHSPNIYLYTSSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTGAVHAQIV 121
F+ + I +FS F L N +T +F++ K A HA ++
Sbjct: 17 FNRCLTEKISYRRVPSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQA-HAHMI 75
Query: 122 KTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSAL 181
+GF V L+ Y+ + +A VFD+M R+VVS+ MI+GY++ D+ A
Sbjct: 76 ISGFRPTTFVLNCLLQVYTNSRDFV-SASMVFDKMPLRDVVSWNKMINGYSKSNDMFKAN 134
Query: 182 KLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCAL 241
F+ MP RDV SWN++++G QNG + I +F +M E R T L
Sbjct: 135 SFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGR-------TFAIIL 187
Query: 242 SACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLT 301
C LG IHG V + D +++L+DMY K + +VF+ P+K
Sbjct: 188 KVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSV 247
Query: 302 SWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACT 348
SW+++I + A+ F++M + V + +L +C
Sbjct: 248 SWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQS--IYASVLRSCA 292
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 162/370 (43%), Gaps = 65/370 (17%)
Query: 99 IYPHVLKSC---HESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDE 155
IY VL+SC E R G +HA +K+ F IV+TA +D Y++ + +A+ +FD
Sbjct: 283 IYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAK-CDNMQDAQILFDN 341
Query: 156 MRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLF 215
N S+ AMI+GY++ ++GF + + LF
Sbjct: 342 SENLNRQSYNAMITGYSQ-----------------------------EEHGF--KALLLF 370
Query: 216 REMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSL 275
+ +++ G+ + ++L AC L G I+G K+ +D ++N+
Sbjct: 371 HRL--MSSGLGF-----DEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAA 423
Query: 276 VDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRP 335
+DMYGKC LA A +VF+ + SWN++I +G+ + +F M+ + P
Sbjct: 424 IDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLR--SRIEP 481
Query: 336 DGVTFVGLLNACT----------HGGLVEQ--------GCSYFEMMTREYGIEPQIEHYG 377
D TF +L ACT H +V+ GCS +M ++ IE + +
Sbjct: 482 DEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHS 541
Query: 378 CLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLE--ID 435
+G +E +E + ++ V W S+ +G + +++ A+ +++E I
Sbjct: 542 RFFQRANVSGTMEE-LEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGIT 600
Query: 436 PHNGGYGIML 445
P Y +L
Sbjct: 601 PDKFTYATVL 610
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 114/451 (25%), Positives = 183/451 (40%), Gaps = 96/451 (21%)
Query: 34 HAH---TDFYAFKLVRFCALTL----SNLPYARRIFDHLHSPNIYLYTS----------- 75
HAH +DF A +VR L + N+ A+ +FD+ + N Y +
Sbjct: 304 HAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHG 363
Query: 76 -STFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCH--ESRSTG-AVHAQIVKTGFEQYPIV 131
LF R++ + + V ++C + S G ++ +K+ V
Sbjct: 364 FKALLLFHRLM----SSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCV 419
Query: 132 QTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERD 191
A +D Y + L A +VFDEMR R+ VS
Sbjct: 420 ANAAIDMYGK-CQALAEAFRVFDEMRRRDAVS---------------------------- 450
Query: 192 VPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQ 251
WNA+IA QNG E + LF M+ E P+ T L AC S L
Sbjct: 451 ---WNAIIAAHEQNGKGYETLFLFVSMLRSRIE-------PDEFTFGSILKACTGGS-LG 499
Query: 252 LGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKV----------------FEMN 295
G IH + K+ +S + SL+DMY KCG + A K+ E
Sbjct: 500 YGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKM 559
Query: 296 PDKGL----TSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGG 351
+K L SWNS+I+ + + QSE A +F +M+E G + PD T+ +L+ C +
Sbjct: 560 HNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMG--ITPDKFTYATVLDTCANLA 617
Query: 352 LVEQGCSYFEMMTREYGIEPQIEHYGC--LVDLLGRAGRFDEAMEVVRGMSMEPDEVVWG 409
G + ++ E Q + Y C LVD+ + G ++ ++ S+ D V W
Sbjct: 618 SAGLGKQIHAQVIKK---ELQSDVYICSTLVDMYSKCGDLHDS-RLMFEKSLRRDFVTWN 673
Query: 410 SLFNGCKVYGRTDLA-EFAAKKLLE-IDPHN 438
++ G +G+ + A + + +LE I P++
Sbjct: 674 AMICGYAHHGKGEEAIQLFERMILENIKPNH 704
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 266 bits (679), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 165/524 (31%), Positives = 272/524 (51%), Gaps = 65/524 (12%)
Query: 5 LNEQVLTIL--GKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIF 62
L +Q+L+ L S+ LK++ A + G + + +L+ + + ++ YAR++F
Sbjct: 8 LTKQMLSELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLE-NLVVIGDMCYARQVF 66
Query: 63 DHLHSPNIYLYTSSTFSLFRRMLCNSNPTTT------------RPNNFIYPHVLKSCHE- 109
D +H P I+L+ + LF+ + N P + RP+ F YP V+K+ +
Sbjct: 67 DEMHKPRIFLWNT----LFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQL 122
Query: 110 -SRSTG-AVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAM 167
S G A+HA +VK GF IV T LV
Sbjct: 123 GDFSCGFALHAHVVKYGFGCLGIVATELV------------------------------- 151
Query: 168 ISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGY 227
Y + G++ SA LF+ M +D+ +WNA +A C Q G + + F +M A A +
Sbjct: 152 -MMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQF-- 208
Query: 228 RCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLAL 287
+ T+V LSACG L++G+ I+ K + + + N+ +DM+ KCGN
Sbjct: 209 -----DSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEA 263
Query: 288 ARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNAC 347
AR +FE + + SW++MI +A++G S A+ +F M G +RP+ VTF+G+L+AC
Sbjct: 264 ARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEG--LRPNYVTFLGVLSAC 321
Query: 348 THGGLVEQGCSYFEMMTR--EYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDE 405
+H GLV +G YF +M + + +EP+ EHY C+VDLLGR+G +EA E ++ M +EPD
Sbjct: 322 SHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDT 381
Query: 406 VVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRIL 465
+WG+L C V+ L + A L+E P G Y ++L+N+Y GKWD V V +
Sbjct: 382 GIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKM 441
Query: 466 KQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESLI 509
++ + KV S +E + ++H F D+S P+++ +Y L+ ++
Sbjct: 442 RKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEIL 485
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 265 bits (676), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 163/493 (33%), Positives = 260/493 (52%), Gaps = 43/493 (8%)
Query: 16 SNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSPNIYLYTS 75
SN + HL Q+ A L T G+ +A +L L + R D ++ +IY
Sbjct: 32 SNSITHLFQVHARLITSGNFWDSSWAIRL----------LKSSSRFGDSSYTVSIYRSIG 81
Query: 76 STF---SLFRRMLCNSNPTTTR------------PNNFIYPHVLKSCHESR----STGAV 116
+ +F+ L +S+P P+++ + ++ SC E S
Sbjct: 82 KLYCANPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLI-SCIEKTCCVDSGKMC 140
Query: 117 HAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGD 176
H Q +K G +Q VQ +L+ Y+ G L A+K+F E+ +R++VS+ ++I+G R GD
Sbjct: 141 HGQAIKHGCDQVLPVQNSLMHMYT-CCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGD 199
Query: 177 VDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVT 236
V +A KLFDEMP++++ SWN +I+ I LFREMV G++ N+ T
Sbjct: 200 VLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMV----RAGFQGNES---T 252
Query: 237 LVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNP 296
LV L+ACG ++ L+ G+ +H + + I +L+DMYGKC + LAR++F+
Sbjct: 253 LVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLS 312
Query: 297 DKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQG 356
+ +WN MI LHG+ EG + +FE M+ G +RPD VTFVG+L C GLV QG
Sbjct: 313 IRNKVTWNVMILAHCLHGRPEGGLELFEAMIN--GMLRPDEVTFVGVLCGCARAGLVSQG 370
Query: 357 CSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSME---PDEVVWGSLFN 413
SY+ +M E+ I+P H C+ +L AG +EA E ++ + E P+ W +L +
Sbjct: 371 QSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLS 430
Query: 414 GCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKV 473
+ G L E AK L+E DP N Y +L N+Y G+W++V V ++K++K ++
Sbjct: 431 SSRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRI 490
Query: 474 PGCSWIEIDDQVH 486
PGC +++ + VH
Sbjct: 491 PGCGLVDLKEIVH 503
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 126/346 (36%), Positives = 205/346 (59%), Gaps = 10/346 (2%)
Query: 166 AMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAER 225
+++ YA+ + A +F +P+R SW ALI+G Q G G++LF +M R
Sbjct: 391 SLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKM------R 444
Query: 226 GYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNL 285
G + + T L A + L LGK +H ++ ++ + F + LVDMY KCG++
Sbjct: 445 GSNL-RADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSI 503
Query: 286 ALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLN 345
A +VFE PD+ SWN++I+ A +G E AI F +M+E G ++PD V+ +G+L
Sbjct: 504 KDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESG--LQPDSVSILGVLT 561
Query: 346 ACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDE 405
AC+H G VEQG YF+ M+ YGI P+ +HY C++DLLGR GRF EA +++ M EPDE
Sbjct: 562 ACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDE 621
Query: 406 VVWGSLFNGCKVYGRTDLAEFAAKKLLEIDP-HNGGYGIMLANVYGELGKWDEVRNVWRI 464
++W S+ N C+++ LAE AA+KL ++ + + ++N+Y G+W++VR+V +
Sbjct: 622 IMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKA 681
Query: 465 LKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESLIG 510
++++ KVP SW+E++ ++H F S DQ+ P +E+ + L
Sbjct: 682 MRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTA 727
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 126/266 (47%), Gaps = 10/266 (3%)
Query: 83 RMLCNSNPTTTRPNNFIYPHVLKSCHESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRG 142
++ CNSN +R + S T V A+I+KTGF+ +V+ R
Sbjct: 2 KLYCNSNEVRSRTLATLRQLRQPSPATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRR 61
Query: 143 LGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGC 202
G + A KV+DEM +N VS MISG+ + GDV SA LFD MP+R V +W L+
Sbjct: 62 -GQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWY 120
Query: 203 TQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYK 262
+N F E +LFR+M R C P+ VT L C +H + K
Sbjct: 121 ARNSHFDEAFKLFRQMC-----RSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVK 175
Query: 263 NDFFVDSF--ISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAI 320
F + F +SN L+ Y + L LA +FE P+K ++N++I + G +I
Sbjct: 176 LGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESI 235
Query: 321 AVFEQMVECGGDVRPDGVTFVGLLNA 346
+F +M + G +P TF G+L A
Sbjct: 236 HLFLKMRQSGH--QPSDFTFSGVLKA 259
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 159/381 (41%), Gaps = 68/381 (17%)
Query: 54 NLPYARRIFDHLHSPNIYLYT------------SSTFSLFRRMLCNSNPTTTRPNNFIYP 101
++ AR +FD + + +T F LFR+M C S+ + T P++ +
Sbjct: 94 DVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQM-CRSS-SCTLPDHVTFT 151
Query: 102 HVLKSCHES---RSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRE 158
+L C+++ + G VHA VK GF+ P + + V
Sbjct: 152 TLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNV---------------------- 189
Query: 159 RNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREM 218
++ Y V +D A LF+E+PE+D ++N LI G ++G ++E I LF +M
Sbjct: 190 --------LLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKM 241
Query: 219 VALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDM 278
+ G+ +P+ T L A LG+ +H F D+ + N ++D
Sbjct: 242 ----RQSGH---QPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDF 294
Query: 279 YGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGV 338
Y K + R +F+ P+ S+N +I+ ++ Q E ++ F +M G D R
Sbjct: 295 YSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRR--NF 352
Query: 339 TFVGLLNACTHGGLVEQG----CSYFEMMTREYGIEPQIEHYG-CLVDLLGRAGRFDEAM 393
F +L+ + ++ G C I H G LVD+ + F+EA
Sbjct: 353 PFATMLSIAANLSSLQMGRQLHCQAL------LATADSILHVGNSLVDMYAKCEMFEEAE 406
Query: 394 EVVRGMSMEPDEVVWGSLFNG 414
+ + + + V W +L +G
Sbjct: 407 LIFKSLP-QRTTVSWTALISG 426
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 151/367 (41%), Gaps = 55/367 (14%)
Query: 72 LYTSSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSC---HESRSTGAVHAQIVKTGFEQY 128
LYT S LF +M + +P++F + VLK+ H+ +HA V TGF +
Sbjct: 230 LYTES-IHLFLKM----RQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRD 284
Query: 129 PIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMP 188
V ++D YS+ D + E + LFDEMP
Sbjct: 285 ASVGNQILDFYSK-----------HDRVLETRM---------------------LFDEMP 312
Query: 189 ERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTS 248
E D S+N +I+ +Q + + FREM + +R N P LS + S
Sbjct: 313 ELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRR---NFP----FATMLSIAANLS 365
Query: 249 MLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMIN 308
LQ+G+ +H + NSLVDMY KC A +F+ P + SW ++I+
Sbjct: 366 SLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALIS 425
Query: 309 CFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYG 368
+ G + +F +M G ++R D TF +L A + G + R
Sbjct: 426 GYVQKGLHGAGLKLFTKMR--GSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGN 483
Query: 369 IEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDE--VVWGSLFNGCKVYGRTDLAEF 426
+E G LVD+ + G +A++V M PD V W +L + G + A
Sbjct: 484 LENVFSGSG-LVDMYAKCGSIKDAVQVFEEM---PDRNAVSWNALISAHADNGDGEAAIG 539
Query: 427 AAKKLLE 433
A K++E
Sbjct: 540 AFAKMIE 546
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 28/221 (12%)
Query: 160 NVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMV 219
NV S + ++ YA+ G + A+++F+EMP+R+ SWNALI+ NG I F +M+
Sbjct: 486 NVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMI 545
Query: 220 ALAAERGYRCNKPNPVTLVCALSACGH-------TSMLQLGKWIHGYVYKNDFFVDSFIS 272
E G +P+ V+++ L+AC H T Q I+G K +
Sbjct: 546 ----ESGL---QPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYA----- 593
Query: 273 NSLVDMYGKCGNLALARKVFE---MNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVEC 329
++D+ G+ G A A K+ + PD+ + W+S++N +H A E++
Sbjct: 594 -CMLDLLGRNGRFAEAEKLMDEMPFEPDEIM--WSSVLNACRIHKNQSLAERAAEKLFSM 650
Query: 330 GGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIE 370
+ D +V + N G E+ + M RE GI+
Sbjct: 651 --EKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAM-RERGIK 688
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 12/220 (5%)
Query: 116 VHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVG 175
+HA I+++G + + LVD Y++ G + +A +VF+EM +RN VS+ A+IS +A G
Sbjct: 474 LHAFIIRSGNLENVFSGSGLVDMYAK-CGSIKDAVQVFEEMPDRNAVSWNALISAHADNG 532
Query: 176 DVDSALKLFDEMPER----DVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNK 231
D ++A+ F +M E D S ++ C+ GF +G F+ M +
Sbjct: 533 DGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYG------IT 586
Query: 232 PNPVTLVCALSACGHTSML-QLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARK 290
P C L G + K + ++ D + S + N+ + A K
Sbjct: 587 PKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEK 646
Query: 291 VFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECG 330
+F M + ++ SM N +A G+ E V + M E G
Sbjct: 647 LFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERG 686
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%)
Query: 272 SNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGG 331
+N+++ + K G+++ AR +F+ PD+ + +W ++ +A + + A +F QM
Sbjct: 82 TNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSS 141
Query: 332 DVRPDGVTFVGLLNAC 347
PD VTF LL C
Sbjct: 142 CTLPDHVTFTTLLPGC 157
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 263 bits (671), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 151/502 (30%), Positives = 255/502 (50%), Gaps = 61/502 (12%)
Query: 23 KQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSPNIYLYT-------- 74
+++ AH+ + + +L+ F L AR++ D + N+ +T
Sbjct: 72 QRVHAHMIKTRYLPATYLRTRLLIFYG-KCDCLEDARKVLDEMPEKNVVSWTAMISRYSQ 130
Query: 75 ----SSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTG---AVHAQIVKTGFEQ 127
S ++F M+ + +PN F + VL SC + G +H IVK ++
Sbjct: 131 TGHSSEALTVFAEMM----RSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDS 186
Query: 128 YPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEM 187
+ V ++L+D Y A+ G + A ++F+ +
Sbjct: 187 HIFVGSSLLDMY--------------------------------AKAGQIKEAREIFECL 214
Query: 188 PERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHT 247
PERDV S A+IAG Q G E + +F + + PN VT L+A
Sbjct: 215 PERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGM-------SPNYVTYASLLTALSGL 267
Query: 248 SMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMI 307
++L GK H +V + + + + NSL+DMY KCGNL+ AR++F+ P++ SWN+M+
Sbjct: 268 ALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAML 327
Query: 308 NCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFE-MMTRE 366
++ HG + +F M + V+PD VT + +L+ C+HG + + G + F+ M+ E
Sbjct: 328 VGYSKHGLGREVLELFRLMRD-EKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGE 386
Query: 367 YGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEF 426
YG +P EHYGC+VD+LGRAGR DEA E ++ M +P V GSL C+V+ D+ E
Sbjct: 387 YGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGES 446
Query: 427 AAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVPGCSWIEIDDQVH 486
++L+EI+P N G ++L+N+Y G+W +V NV ++ Q+ K PG SWI+ + +H
Sbjct: 447 VGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLH 506
Query: 487 QFFSLDQSSPKAEELYSVLESL 508
F + D++ P+ EE+ + ++ +
Sbjct: 507 YFHANDRTHPRREEVLAKMKEI 528
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 166/351 (47%), Gaps = 28/351 (7%)
Query: 80 LFRRMLCNSNPTTTRPNNFIYPHVL---KSCHESRSTGAVHAQIV---KTGFEQYPIVQT 133
+F M ++ P N++ +L + C R A+ + + GF Y +
Sbjct: 1 MFNLMRLIHRSFSSSPTNYVLQTILPISQLCSNGRLQEALLEMAMLGPEMGFHGYDALLN 60
Query: 134 ALVDSYSRGLGGLGNAEKVFDEMRERNVVSFT----AMISGYARVGDVDSALKLFDEMPE 189
A +D + L + ++V M + + T ++ Y + ++ A K+ DEMPE
Sbjct: 61 ACLDKRA-----LRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPE 115
Query: 190 RDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSM 249
++V SW A+I+ +Q G SE + +F EM+ KPN T L++C S
Sbjct: 116 KNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDG-------KPNEFTFATVLTSCIRASG 168
Query: 250 LQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINC 309
L LGK IHG + K ++ F+ +SL+DMY K G + AR++FE P++ + S ++I
Sbjct: 169 LGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAG 228
Query: 310 FALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGC-SYFEMMTREYG 368
+A G E A+ +F ++ G + P+ VT+ LL A + L++ G ++ ++ RE
Sbjct: 229 YAQLGLDEEALEMFHRLHSEG--MSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELP 286
Query: 369 IEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYG 419
+++ L+D+ + G A + M E + W ++ G +G
Sbjct: 287 FYAVLQN--SLIDMYSKCGNLSYARRLFDNMP-ERTAISWNAMLVGYSKHG 334
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 262 bits (669), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 151/446 (33%), Positives = 246/446 (55%), Gaps = 28/446 (6%)
Query: 55 LPYARRIFDHLHSPNI--YLYTSSTF---SLFRRMLC---NSNPTTTRPNNFIYPHVLKS 106
L YAR++FD L P + Y Y S + L + +L + + + + + VLK+
Sbjct: 85 LSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKA 144
Query: 107 CHESRST--------GAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRE 158
+ ST VHA+I+K E ++ TALVD+Y + G L +A VF+ M++
Sbjct: 145 SNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKS-GKLESARTVFETMKD 203
Query: 159 RNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREM 218
NVV T+MISGY G V+ A ++F+ +D+ +NA++ G +++G E + +M
Sbjct: 204 ENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSG---ETAKRSVDM 260
Query: 219 VALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDM 278
G+ PN T + AC + ++G+ +H + K+ + + +SL+DM
Sbjct: 261 YISMQRAGFH---PNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDM 317
Query: 279 YGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGV 338
Y KCG + AR+VF+ +K + SW SMI+ + +G E A+ +F +M E + P+ V
Sbjct: 318 YAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEF--RIEPNYV 375
Query: 339 TFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRG 398
TF+G L+AC+H GLV++G FE M R+Y ++P++EHY C+VDL+GRAG ++A E R
Sbjct: 376 TFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARA 435
Query: 399 MSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEI--DPHNGGYGIMLANVYGELGKWD 456
M PD +W +L + C ++G +LA AA +L ++ D G Y + L+NVY KWD
Sbjct: 436 MPERPDSDIWAALLSSCNLHGNVELASIAASELFKLNADKRPGAY-LALSNVYASNDKWD 494
Query: 457 EVRNVWRILKQQKSYKVPGCSWIEID 482
V + ++K+++ K G SW D
Sbjct: 495 NVSKIREVMKRRRISKTIGRSWTSED 520
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 127/305 (41%), Gaps = 52/305 (17%)
Query: 173 RVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKP 232
+ G + A ++FDE+P+ + ++N +I+G ++G L +E++ L Y K
Sbjct: 81 KCGCLSYARQVFDELPKPTLSAYNYMISGYLKHG-------LVKELLLLVQRMSYSGEKA 133
Query: 233 NPVTLVCALSAC---GHTSML--QLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLAL 287
+ TL L A G T +L L + +H + K D +D + +LVD Y K G L
Sbjct: 134 DGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLES 193
Query: 288 ARKVFEMNPDKGLTSWNSMINCFALHGQSEGA-----------IAVFEQMVE----CGGD 332
AR VFE D+ + SMI+ + G E A I V+ MVE G
Sbjct: 194 ARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGET 253
Query: 333 VR---------------PDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYG 377
+ P+ TF ++ AC+ E G + + G+ I+
Sbjct: 254 AKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKS-GVYTHIKMGS 312
Query: 378 CLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAE-----FAAKKLL 432
L+D+ + G ++A V M E + W S+ +G YG+ E F K
Sbjct: 313 SLLDMYAKCGGINDARRVFDQMQ-EKNVFSWTSMIDG---YGKNGNPEEALELFTRMKEF 368
Query: 433 EIDPH 437
I+P+
Sbjct: 369 RIEPN 373
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 87/195 (44%), Gaps = 9/195 (4%)
Query: 251 QLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCF 310
+ GK IH + K F D IS L+ ++ KCG L+ AR+VF+ P L+++N MI+ +
Sbjct: 51 KAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGY 110
Query: 311 ALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGG----LVEQGCSYFEMMTRE 366
HG + + + ++M G + DG T +L A G L C +
Sbjct: 111 LKHGLVKELLLLVQRMSYSGE--KADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIK 168
Query: 367 YGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAE- 425
+E LVD ++G+ + A V M E + V S+ +G G + AE
Sbjct: 169 CDVELDDVLITALVDTYVKSGKLESARTVFETMKDE-NVVCCTSMISGYMNQGFVEDAEE 227
Query: 426 -FAAKKLLEIDPHNG 439
F K+ +I +N
Sbjct: 228 IFNTTKVKDIVVYNA 242
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 152/472 (32%), Positives = 237/472 (50%), Gaps = 65/472 (13%)
Query: 55 LPYARRIFDHLHSPNIYLYTSST---------------FSLFRRMLCNSNPTTTRPNNF- 98
L AR++FD + + Y +T+ +SL +R+ +RPN F
Sbjct: 167 LEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRV------PNSRPNIFT 220
Query: 99 --IYPHVLKSCHESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEM 156
I + R +H IV+ G + ++ ++L+D Y
Sbjct: 221 VSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMY----------------- 263
Query: 157 RERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFR 216
+ G +D A +FD++ E+DV SW ++I ++ + EG LF
Sbjct: 264 ---------------GKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFS 308
Query: 217 EMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLV 276
E+V C +PN T L+AC + +LGK +HGY+ + F SF S+SLV
Sbjct: 309 ELVG-------SCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLV 361
Query: 277 DMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPD 336
DMY KCGN+ A+ V + P L SW S+I A +GQ + A+ F+ +++ G +PD
Sbjct: 362 DMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSG--TKPD 419
Query: 337 GVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVV 396
VTFV +L+ACTH GLVE+G +F +T ++ + +HY CLVDLL R+GRF++ V+
Sbjct: 420 HVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVI 479
Query: 397 RGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWD 456
M M+P + +W S+ GC YG DLAE AA++L +I+P N + +AN+Y GKW+
Sbjct: 480 SEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWE 539
Query: 457 EVRNVWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESL 508
E + + +++ K PG SW EI + H F + D S P ++ L L
Sbjct: 540 EEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLREL 591
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 112/334 (33%), Positives = 172/334 (51%), Gaps = 14/334 (4%)
Query: 94 RPNNFIYPHVLKSCHESRST---GAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAE 150
+P Y ++++ C ++R+ VH I +GF ++ L+ Y++ G L +A
Sbjct: 82 KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAK-CGSLVDAR 140
Query: 151 KVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSE 210
KVFDEM R++ S+ M++GYA VG ++ A KLFDEM E+D SW A++ G + E
Sbjct: 141 KVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEE 200
Query: 211 GIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSF 270
+ L+ M + R PN T+ A++A ++ GK IHG++ + D
Sbjct: 201 ALVLYSLMQRVPNSR------PNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEV 254
Query: 271 ISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECG 330
+ +SL+DMYGKCG + AR +F+ +K + SW SMI+ + + ++F ++V G
Sbjct: 255 LWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELV--G 312
Query: 331 GDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFD 390
RP+ TF G+LNAC E G MTR G +P LVD+ + G +
Sbjct: 313 SCERPNEYTFAGVLNACADLTTEELGKQVHGYMTR-VGFDPYSFASSSLVDMYTKCGNIE 371
Query: 391 EAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLA 424
A VV G +PD V W SL GC G+ D A
Sbjct: 372 SAKHVVDGCP-KPDLVSWTSLIGGCAQNGQPDEA 404
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 97/228 (42%), Gaps = 13/228 (5%)
Query: 211 GIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSF 270
G +L RE V L R KP T + C T L+ GK +H ++ + F
Sbjct: 66 GQKLLREAVQLLG----RAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIV 121
Query: 271 ISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECG 330
I N L+ MY KCG+L ARKVF+ P++ L SWN M+N +A G E A +F++M E
Sbjct: 122 IWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTE-- 179
Query: 331 GDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFD 390
D ++ ++ E+ + +M R P I V
Sbjct: 180 ----KDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIR 235
Query: 391 EAMEV---VRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEID 435
E+ + ++ DEV+W SL + G D A K++E D
Sbjct: 236 RGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKD 283
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/452 (33%), Positives = 241/452 (53%), Gaps = 35/452 (7%)
Query: 40 YAFKLVRFCALTLSNLPYARRIFDHLHSPNIYLYTSSTFSLFRRMLCNSNPTTTRPNNFI 99
YA + +LT YA + +H + N++L S+F+L P +
Sbjct: 5 YASSCTKLISLTKQLSSYANQ-GNHEQALNLFLQMHSSFAL---------PLDAH----V 50
Query: 100 YPHVLKSCHESRST---GAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEM 156
+ LKSC + G+VHA VK+ F P V AL+D Y + L + +A K+FDE+
Sbjct: 51 FSLALKSCAAAFRPVLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLS-VSHARKLFDEI 109
Query: 157 RERNVVSFTAMISGYARVGDVDSALKLF---DEMPERDVPSWNALIAGC--TQNGFFSEG 211
+RN V + AMIS Y G V A++L+ D MP S+NA+I G T++G +
Sbjct: 110 PQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNES--SFNAIIKGLVGTEDGSY-RA 166
Query: 212 IRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFI 271
I +R+M+ KPN +TL+ +SAC +L K IH Y ++N +
Sbjct: 167 IEFYRKMIEFRF-------KPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQL 219
Query: 272 SNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGG 331
+ LV+ YG+CG++ + VF+ D+ + +W+S+I+ +ALHG +E A+ F++M
Sbjct: 220 KSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMEL--A 277
Query: 332 DVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDE 391
V PD + F+ +L AC+H GL ++ YF+ M +YG+ +HY CLVD+L R GRF+E
Sbjct: 278 KVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEE 337
Query: 392 AMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGE 451
A +V++ M +P WG+L C+ YG +LAE AA++LL ++P N ++L +Y
Sbjct: 338 AYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPENPANYVLLGKIYMS 397
Query: 452 LGKWDEVRNVWRILKQQKSYKVPGCSWIEIDD 483
+G+ +E + +K+ PG SW D
Sbjct: 398 VGRQEEAERLRLKMKESGVKVSPGSSWCLFKD 429
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 258 bits (659), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 143/440 (32%), Positives = 235/440 (53%), Gaps = 20/440 (4%)
Query: 73 YTSSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHES---RSTGAVHAQIVKTGFEQYP 129
+ + RRM+ + + F YP V+++C + + VHA +++ E +
Sbjct: 266 FYQEALEMVRRMV----SSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR--EDFS 319
Query: 130 I-VQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMP 188
+LV Y + G A +F++M +++VS+ A++SGY G + A +F EM
Sbjct: 320 FHFDNSLVSLYYK-CGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMK 378
Query: 189 ERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTS 248
E+++ SW +I+G +NGF EG++LF M G+ +P A+ +C
Sbjct: 379 EKNILSWMIMISGLAENGFGEEGLKLFSCM----KREGF---EPCDYAFSGAIKSCAVLG 431
Query: 249 MLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMIN 308
G+ H + K F N+L+ MY KCG + AR+VF P SWN++I
Sbjct: 432 AYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIA 491
Query: 309 CFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYG 368
HG A+ V+E+M++ G +RPD +T + +L AC+H GLV+QG YF+ M Y
Sbjct: 492 ALGQHGHGAEAVDVYEEMLKKG--IRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYR 549
Query: 369 IEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAA 428
I P +HY L+DLL R+G+F +A V+ + +P +W +L +GC+V+G +L AA
Sbjct: 550 IPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAA 609
Query: 429 KKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVPGCSWIEIDDQVHQF 488
KL + P + G ++L+N++ G+W+EV V ++++ + K CSWIE++ QVH F
Sbjct: 610 DKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTF 669
Query: 489 FSLDQSSPKAEELYSVLESL 508
D S P+AE +Y L+ L
Sbjct: 670 LVDDTSHPEAEAVYIYLQDL 689
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 165/400 (41%), Gaps = 79/400 (19%)
Query: 89 NPTTTRPNNFIYPHVLKSCHESRSTG-----AVHAQIVKTGFEQYPIVQTALVDSYSRGL 143
NP R Y L+ C R T AVH I+ GF+ + L+D Y +
Sbjct: 4 NPDLVRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKS- 62
Query: 144 GGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMP--ERDVPSWNALIAG 201
L A ++FDE+ E + ++ T M+SGY GD+ A +F++ P RD +NA+I G
Sbjct: 63 SELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITG 122
Query: 202 CTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACG------------HTSM 249
+ N I LF +M G+ KP+ T L+ H +
Sbjct: 123 FSHNNDGYSAINLFCKM----KHEGF---KPDNFTFASVLAGLALVADDEKQCVQFHAAA 175
Query: 250 LQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGN----LALARKVFE------------ 293
L+ G GY+ + +SN+LV +Y KC + L ARKVF+
Sbjct: 176 LKSGA---GYI--------TSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTT 224
Query: 294 --------------------MNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDV 333
M+ + L ++N+MI+ + G + A+ + +MV G +
Sbjct: 225 MMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSG--I 282
Query: 334 RPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAM 393
D T+ ++ AC GL++ G + R ++ LV L + G+FDEA
Sbjct: 283 ELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDN--SLVSLYYKCGKFDEAR 340
Query: 394 EVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLE 433
+ M + D V W +L +G G A+ K++ E
Sbjct: 341 AIFEKMPAK-DLVSWNALLSGYVSSGHIGEAKLIFKEMKE 379
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 130/324 (40%), Gaps = 79/324 (24%)
Query: 84 MLCNSNPTTTRPNNFIYPHVLKS----CHESRSTGAVHAQIVKTGFEQYPIVQTALVDSY 139
+ C +P+NF + VL + + HA +K+G V ALV Y
Sbjct: 135 LFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVY 194
Query: 140 SRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSW---- 195
S+ S +++ SA K+FDE+ E+D SW
Sbjct: 195 SK-------------------CASSPSLLH---------SARKVFDEILEKDERSWTTMM 226
Query: 196 ----------------------------NALIAGCTQNGFFSEGIRLFREMVALAAERGY 227
NA+I+G GF+ E + + R MV+ E
Sbjct: 227 TGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIEL-- 284
Query: 228 RCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLAL 287
+ T + AC +LQLGK +H YV + + F F NSLV +Y KCG
Sbjct: 285 -----DEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHF-DNSLVSLYYKCGKFDE 338
Query: 288 ARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNAC 347
AR +FE P K L SWN++++ + G A +F++M E + ++++ +++
Sbjct: 339 ARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKE------KNILSWMIMISGL 392
Query: 348 THGGLVEQGCSYFEMMTREYGIEP 371
G E+G F M RE G EP
Sbjct: 393 AENGFGEEGLKLFSCMKRE-GFEP 415
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 126/360 (35%), Positives = 213/360 (59%), Gaps = 13/360 (3%)
Query: 165 TAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAE 224
TA++ YA+ G + A+++F+ M ++ +W++++AG QN + E + L+R ++ E
Sbjct: 201 TALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLE 260
Query: 225 RGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGN 284
+ N TL + AC + + L GK +H + K+ F + F+++S VDMY KCG+
Sbjct: 261 Q-------NQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGS 313
Query: 285 LALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLL 344
L + +F +K L WN++I+ FA H + + + +FE+M + G + P+ VTF LL
Sbjct: 314 LRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDG--MHPNEVTFSSLL 371
Query: 345 NACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPD 404
+ C H GLVE+G +F++M YG+ P + HY C+VD+LGRAG EA E+++ + +P
Sbjct: 372 SVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPT 431
Query: 405 EVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRI 464
+WGSL C+VY +LAE AA+KL E++P N G ++L+N+Y +W+E+ ++
Sbjct: 432 ASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKL 491
Query: 465 LKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESLI----GFGNEVMIEQQ 520
L+ KV G SWI+I D+VH F + P+ E+ S L++L+ FG + +E +
Sbjct: 492 LRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHE 551
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 6/175 (3%)
Query: 241 LSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGL 300
L C + K HG + + D D + N L++ Y KCG + LAR+VF+ ++ L
Sbjct: 68 LQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSL 127
Query: 301 TSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNAC-THGGLVEQGCSY 359
SWN+MI + + A+ +F +M G + T +L+AC + +E C
Sbjct: 128 VSWNTMIGLYTRNRMESEALDIFLEMRNEG--FKFSEFTISSVLSACGVNCDALE--CKK 183
Query: 360 FEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNG 414
++ + I+ + L+DL + G +A++V M + V W S+ G
Sbjct: 184 LHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ-DKSSVTWSSMVAG 237
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 137/318 (43%), Gaps = 39/318 (12%)
Query: 80 LFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRST---GAVHAQIVKTGFEQYPIVQTALV 136
L+RR + + N F V+ +C + +HA I K+GF V ++ V
Sbjct: 250 LYRR----AQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAV 305
Query: 137 DSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDV---- 192
D Y++ G L + +F E++E+N+ + +ISG+A+ + LF++M + +
Sbjct: 306 DMYAK-CGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNE 364
Query: 193 PSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQL 252
++++L++ C G EG R F+ M R PN V C + G +L
Sbjct: 365 VTFSSLLSVCGHTGLVEEGRRFFKLM------RTTYGLSPNVVHYSCMVDILGRAGLLSE 418
Query: 253 GKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLAL----ARKVFEMNPDKGLTSWNSMIN 308
+ + F + I SL+ NL L A K+FE+ P+ + + N
Sbjct: 419 A---YELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENA-GNHVLLSN 474
Query: 309 CFALHGQSEGAIAVFEQMVECGGDVRP-DGVTFVGLLNACTHGGLVEQG-------CSYF 360
+A + Q E + + +C DV+ G +++ + + + E G CS
Sbjct: 475 IYAANKQWEEIAKSRKLLRDC--DVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTL 532
Query: 361 EMMT---REYGIEPQIEH 375
+ + R++G +P +EH
Sbjct: 533 DNLVIKFRKFGYKPSVEH 550
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 156/496 (31%), Positives = 248/496 (50%), Gaps = 89/496 (17%)
Query: 61 IFDHLHSPNIYLYTS------------STFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCH 108
+F+ + SP YL+ T S+ RM+ RP+ + +P V+K C
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMM---RTGLARPDEYTFPLVMKVCS 121
Query: 109 ---ESRSTGAVHAQIVKTGF-------------------------------EQYPIVQTA 134
+ R +VH +++ GF E+ + TA
Sbjct: 122 NNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTA 181
Query: 135 LVDSYSR---------------------------GL---GGLGNAEKVFDEMRERNVVSF 164
LV +Y + GL G L NA+K+FDEM +R+++S+
Sbjct: 182 LVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISY 241
Query: 165 TAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAE 224
T+MI GYA+ GD+ SA LF+E DV +W+ALI G QNG +E ++F EM A
Sbjct: 242 TSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCA---- 297
Query: 225 RGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKN-DFFVDSFISNSLVDMYGKCG 283
+ KP+ +V +SAC +L + + Y+++ + F ++ +L+DM KCG
Sbjct: 298 ---KNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCG 354
Query: 284 NLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGL 343
++ A K+FE P + L S+ SM+ A+HG AI +FE+MV+ G + PD V F +
Sbjct: 355 HMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEG--IVPDEVAFTVI 412
Query: 344 LNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEP 403
L C LVE+G YFE+M ++Y I +HY C+V+LL R G+ EA E+++ M E
Sbjct: 413 LKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEA 472
Query: 404 DEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWR 463
WGSL GC ++G T++AE A+ L E++P + G ++L+N+Y L +W +V ++
Sbjct: 473 HASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRD 532
Query: 464 ILKQQKSYKVPGCSWI 479
+ + K+ G SWI
Sbjct: 533 KMNENGITKICGRSWI 548
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 255 bits (652), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 162/477 (33%), Positives = 246/477 (51%), Gaps = 44/477 (9%)
Query: 15 KSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSPNIYLYT 74
++NH +L +TT + T + A LSN R+ +H
Sbjct: 17 RTNHFTIFHRLNHFVTTSSSSVTPLSPQDRNKLLATLLSNCTSLARV-RRIHG------- 68
Query: 75 SSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESR------STGAVHAQIVKTGFEQY 128
+FR + + P NN + ++ HES G V + ++ +
Sbjct: 69 ----DIFRSRILDQYPIAFLWNNIMRSYIR---HESPLDAIQVYLGMVRSTVLPDRY-SL 120
Query: 129 PIVQTALVDSYSRGLGGLGNAEKVF-----DEMRERNVVSFTAMISGYARVGDVDSALKL 183
PIV A V + LG ++ V DE E + I+ Y + G+ ++A K+
Sbjct: 121 PIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCE------SGFITLYCKAGEFENARKV 174
Query: 184 FDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSA 243
FDE PER + SWNA+I G G +E + +F +M E P+ T+V ++
Sbjct: 175 FDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLE-------PDDFTMVSVTAS 227
Query: 244 CGHTSMLQLGKWIHGYVY--KNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLT 301
CG L L +H V K + D + NSL+DMYGKCG + LA +FE + +
Sbjct: 228 CGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVV 287
Query: 302 SWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFE 361
SW+SMI +A +G + A+ F QM E G VRP+ +TFVG+L+AC HGGLVE+G +YF
Sbjct: 288 SWSSMIVGYAANGNTLEALECFRQMREFG--VRPNKITFVGVLSACVHGGLVEEGKTYFA 345
Query: 362 MMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRT 421
MM E+ +EP + HYGC+VDLL R G+ EA +VV M M+P+ +VWG L GC+ +G
Sbjct: 346 MMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDV 405
Query: 422 DLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVPGCSW 478
++AE+ A ++E++P N G ++LANVY G W +V V +++K +K K+P S+
Sbjct: 406 EMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYSY 462
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 255 bits (652), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 151/491 (30%), Positives = 243/491 (49%), Gaps = 61/491 (12%)
Query: 6 NEQVLTILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHL 65
N + L ++ K L +LKQ+ A + T+G +H + KL+ + L YA I +
Sbjct: 9 NHRCLNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVC--LSYALSILRQI 66
Query: 66 HSPNIYLY---------------TSSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKS---- 106
+P+++LY T FSL+ ++L +S RPN F YP + K+
Sbjct: 67 PNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQIL-SSRSNFVRPNEFTYPSLFKASGFD 125
Query: 107 CHESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTA 166
R A+HA ++K F E + A
Sbjct: 126 AQWHRHGRALHAHVLK------------------------------FLEPVNHDRFVQAA 155
Query: 167 MISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERG 226
++ YA G + A LF+ + E D+ +WN L+A SE I E++ L
Sbjct: 156 LVGFYANCGKLREARSLFERIREPDLATWNTLLAAYAN----SEEIDSDEEVLLLFMRMQ 211
Query: 227 YRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLA 286
R PN ++LV + +C + G W H YV KN+ ++ F+ SL+D+Y KCG L+
Sbjct: 212 VR---PNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLS 268
Query: 287 LARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNA 346
ARKVF+ + ++ +N+MI A+HG + I +++ ++ G + PD TFV ++A
Sbjct: 269 FARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQG--LVPDSATFVVTISA 326
Query: 347 CTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEV 406
C+H GLV++G F M YGIEP++EHYGCLVDLLGR+GR +EA E ++ M ++P+
Sbjct: 327 CSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNAT 386
Query: 407 VWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILK 466
+W S + +G + E A K LL ++ N G ++L+N+Y + +W +V ++K
Sbjct: 387 LWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMK 446
Query: 467 QQKSYKVPGCS 477
+ K PG S
Sbjct: 447 DHRVNKSPGIS 457
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 255 bits (651), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 156/519 (30%), Positives = 268/519 (51%), Gaps = 60/519 (11%)
Query: 7 EQVLTILGKSNHLNHLKQLQAH-LTTLGHAHTDFYAFKLVRFCALT--LSNLPYARRIFD 63
++ L +L + ++++ KQ+ A + + F A ++ CA + +++ YA IF
Sbjct: 31 QECLYLLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFR 90
Query: 64 HLHSP-----NIYLYTSSTFSLFRRMLCNSNPTTTR---PNNFIYPHVLKSCHESRST-- 113
+ P N + F LC N R P+NF YP +LK+C +S
Sbjct: 91 GIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIRE 150
Query: 114 -GAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYA 172
+H Q+ K G E VQ +L++ Y
Sbjct: 151 GKQIHGQVFKLGLEADVFVQNSLINMY--------------------------------G 178
Query: 173 RVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVA---LAAERGYRC 229
R G+++ + +F+++ + SW+++++ G +SE + LFR M + L AE
Sbjct: 179 RCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEES--- 235
Query: 230 NKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALAR 289
+V AL AC +T L LG IHG++ +N ++ + SLVDMY KCG L A
Sbjct: 236 ------GMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKAL 289
Query: 290 KVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTH 349
+F+ + ++++MI+ ALHG+ E A+ +F +M++ G + PD V +V +LNAC+H
Sbjct: 290 HIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEG--LEPDHVVYVSVLNACSH 347
Query: 350 GGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWG 409
GLV++G F M +E +EP EHYGCLVDLLGRAG +EA+E ++ + +E ++V+W
Sbjct: 348 SGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWR 407
Query: 410 SLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQK 469
+ + C+V +L + AA++LL++ HN G ++++N+Y + WD+V + +
Sbjct: 408 TFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKG 467
Query: 470 SYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESL 508
+ PG S +E+ + H+F S D+S PK +E+Y +L +
Sbjct: 468 LKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQM 506
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 255 bits (651), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 133/350 (38%), Positives = 208/350 (59%), Gaps = 10/350 (2%)
Query: 160 NVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMV 219
++ + +A+I Y+ + + +FDEM +D+ WN++ AG Q E + LF E+
Sbjct: 488 DIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLEL- 546
Query: 220 ALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMY 279
L+ ER P+ T ++A G+ + +QLG+ H + K + +I+N+L+DMY
Sbjct: 547 QLSRER------PDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMY 600
Query: 280 GKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVT 339
KCG+ A K F+ + + WNS+I+ +A HG+ + A+ + E+M+ G + P+ +T
Sbjct: 601 AKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEG--IEPNYIT 658
Query: 340 FVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGM 399
FVG+L+AC+H GLVE G FE+M R +GIEP+ EHY C+V LLGRAGR ++A E++ M
Sbjct: 659 FVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKM 717
Query: 400 SMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVR 459
+P +VW SL +GC G +LAE AA+ + DP + G ML+N+Y G W E +
Sbjct: 718 PTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAK 777
Query: 460 NVWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESLI 509
V +K + K PG SWI I+ +VH F S D+S KA ++Y VL+ L+
Sbjct: 778 KVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLL 827
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 169/412 (41%), Gaps = 72/412 (17%)
Query: 24 QLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSPNIYLYTSS------- 76
QLQ+ L G + L+ F L N+ YAR +FD L + +T+
Sbjct: 169 QLQSFLVKSGFDRDVYVGTLLIDF-YLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKM 227
Query: 77 -----TFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHES---RSTGAVHAQIVKTGFEQY 128
+ LF +++ P+ +I VL +C +HA I++ G E
Sbjct: 228 GRSYVSLQLFYQLM----EDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMD 283
Query: 129 PIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMP 188
+ L+DSY + G V +A KLF+ MP
Sbjct: 284 ASLMNVLIDSY--------------------------------VKCGRVIAAHKLFNGMP 311
Query: 189 ERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTS 248
+++ SW L++G QN E + LF M KP+ L++C
Sbjct: 312 NKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGL-------KPDMYACSSILTSCASLH 364
Query: 249 MLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMIN 308
L G +H Y K + DS+++NSL+DMY KC L ARKVF++ + +N+MI
Sbjct: 365 ALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIE 424
Query: 309 CFALHG---QSEGAIAVFEQMVECGGDVRPDGVTFVGLLNAC---THGGLVEQGCSYFEM 362
++ G + A+ +F M +RP +TFV LL A T GL +Q
Sbjct: 425 GYSRLGTQWELHEALNIFRDMR--FRLIRPSLLTFVSLLRASASLTSLGLSKQ----IHG 478
Query: 363 MTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNG 414
+ +YG+ I L+D+ ++ V M ++ D V+W S+F G
Sbjct: 479 LMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK-DLVIWNSMFAG 529
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 129/254 (50%), Gaps = 16/254 (6%)
Query: 167 MISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERG 226
+I+ Y+R G + A K+F++MPER++ SW+ +++ C +G + E + +F E
Sbjct: 85 LINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRT----- 139
Query: 227 YRCNKPNPVTLVCALSACGHTSMLQLGKW----IHGYVYKNDFFVDSFISNSLVDMYGKC 282
R + PN L + AC + + G+W + ++ K+ F D ++ L+D Y K
Sbjct: 140 -RKDSPNEYILSSFIQAC--SGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKD 196
Query: 283 GNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVG 342
GN+ AR VF+ P+K +W +MI+ G+S ++ +F Q++E +V PDG
Sbjct: 197 GNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLME--DNVVPDGYILST 254
Query: 343 LLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSME 402
+L+AC+ +E G + R YG+E L+D + GR A ++ GM
Sbjct: 255 VLSACSILPFLEGGKQIHAHILR-YGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMP-N 312
Query: 403 PDEVVWGSLFNGCK 416
+ + W +L +G K
Sbjct: 313 KNIISWTTLLSGYK 326
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 162/380 (42%), Gaps = 61/380 (16%)
Query: 65 LHSPNIYLYTS-STFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTG---AVHAQI 120
LH + L+TS S F L +P+ + +L SC + G VHA
Sbjct: 330 LHKEAMELFTSMSKFGL-------------KPDMYACSSILTSCASLHALGFGTQVHAYT 376
Query: 121 VKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSA 180
+K V +L+D Y++ L +A KVFD +VV F AMI GY+R+G
Sbjct: 377 IKANLGNDSYVTNSLIDMYAK-CDCLTDARKVFDIFAAADVVLFNAMIEGYSRLG----- 430
Query: 181 LKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCA 240
W E + +FR+M +R +P+ +T V
Sbjct: 431 ------------TQWE-----------LHEALNIFRDM-------RFRLIRPSLLTFVSL 460
Query: 241 LSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGL 300
L A + L L K IHG ++K +D F ++L+D+Y C L +R VF+ K L
Sbjct: 461 LRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDL 520
Query: 301 TSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYF 360
WNSM + ++E A+ +F ++ RPD TF ++ A + V+ G +
Sbjct: 521 VIWNSMFAGYVQQSENEEALNLFLELQL--SRERPDEFTFANMVTAAGNLASVQLGQEFH 578
Query: 361 -EMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYG 419
+++ R P I + L+D+ + G ++A + + D V W S+ + +G
Sbjct: 579 CQLLKRGLECNPYITN--ALLDMYAKCGSPEDAHKAFDS-AASRDVVCWNSVISSYANHG 635
Query: 420 RTDLAEFAAKKLLE--IDPH 437
A +K++ I+P+
Sbjct: 636 EGKKALQMLEKMMSEGIEPN 655
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 135/311 (43%), Gaps = 38/311 (12%)
Query: 55 LPYARRIFDHLHSPNIYLYTS------------STFSLFRRMLCNSNPTTTRPNNFIYPH 102
L +R +FD + ++ ++ S +LF + + RP+ F + +
Sbjct: 505 LKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLEL----QLSRERPDEFTFAN 560
Query: 103 VLKSCHESRSTG---AVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRER 159
++ + S H Q++K G E P + AL+D Y++ G +A K FD R
Sbjct: 561 MVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAK-CGSPEDAHKAFDSAASR 619
Query: 160 NVVSFTAMISGYARVGDVDSALKLFDEM----PERDVPSWNALIAGCTQNGFFSEGIRLF 215
+VV + ++IS YA G+ AL++ ++M E + ++ +++ C+ G +G++ F
Sbjct: 620 DVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQF 679
Query: 216 REMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSL 275
M+ E P VC +S G L + + + K + + SL
Sbjct: 680 ELMLRFGIE-------PETEHYVCMVSLLGRAGRLNKAREL---IEKMPTKPAAIVWRSL 729
Query: 276 VDMYGKCGNLALARKVFEM---NPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGD 332
+ K GN+ LA EM + K S+ + N +A G A V E+M + G
Sbjct: 730 LSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERM-KVEGV 788
Query: 333 VRPDGVTFVGL 343
V+ G +++G+
Sbjct: 789 VKEPGRSWIGI 799
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 92/189 (48%), Gaps = 7/189 (3%)
Query: 256 IHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQ 315
+HG + +D+++SN L+++Y + G + ARKVFE P++ L SW++M++ HG
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 316 SEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQG-CSYFEMMT--REYGIEPQ 372
E ++ VF + D P+ + AC+ GL +G F++ + + G +
Sbjct: 126 YEESLVVFLEFWRTRKD-SPNEYILSSFIQACS--GLDGRGRWMVFQLQSFLVKSGFDRD 182
Query: 373 IEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLL 432
+ L+D + G D A V + E V W ++ +GC GR+ ++ +L+
Sbjct: 183 VYVGTLLIDFYLKDGNIDYARLVFDALP-EKSTVTWTTMISGCVKMGRSYVSLQLFYQLM 241
Query: 433 EIDPHNGGY 441
E + GY
Sbjct: 242 EDNVVPDGY 250
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 255 bits (651), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 153/516 (29%), Positives = 259/516 (50%), Gaps = 70/516 (13%)
Query: 10 LTILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSPN 69
L I G+ H + L+ + H +G+ + YA +L AR++F+ + +
Sbjct: 75 LLIQGRIVHAHILQSIFRHDIVMGNTLLNMYA---------KCGSLEEARKVFEKMPQRD 125
Query: 70 IYLYTS--STFS----------LFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRST---G 114
+T+ S +S F +ML PN F V+K+ R
Sbjct: 126 FVTWTTLISGYSQHDRPCDALLFFNQML----RFGYSPNEFTLSSVIKAAAAERRGCCGH 181
Query: 115 AVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARV 174
+H VK GF+ V +AL+D Y+R
Sbjct: 182 QLHGFCVKCGFDSNVHVGSALLDLYTR--------------------------------Y 209
Query: 175 GDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNP 234
G +D A +FD + R+ SWNALIAG + + + LF+ M+ G+R P+
Sbjct: 210 GLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGML----RDGFR---PSH 262
Query: 235 VTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEM 294
+ AC T L+ GKW+H Y+ K+ + +F N+L+DMY K G++ ARK+F+
Sbjct: 263 FSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDR 322
Query: 295 NPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVE 354
+ + SWNS++ +A HG + A+ FE+M G +RP+ ++F+ +L AC+H GL++
Sbjct: 323 LAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVG--IRPNEISFLSVLTACSHSGLLD 380
Query: 355 QGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNG 414
+G Y+E+M ++ GI P+ HY +VDLLGRAG + A+ + M +EP +W +L N
Sbjct: 381 EGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNA 439
Query: 415 CKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVP 474
C+++ T+L +AA+ + E+DP + G ++L N+Y G+W++ V + +K+ K P
Sbjct: 440 CRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEP 499
Query: 475 GCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESLIG 510
CSW+EI++ +H F + D+ P+ EE+ E ++
Sbjct: 500 ACSWVEIENAIHMFVANDERHPQREEIARKWEEVLA 535
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 84/176 (47%), Gaps = 8/176 (4%)
Query: 241 LSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGL 300
L C +L G+ +H ++ ++ F D + N+L++MY KCG+L ARKVFE P +
Sbjct: 67 LKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDF 126
Query: 301 TSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYF 360
+W ++I+ ++ H + A+ F QM+ G P+ T ++ A +GC
Sbjct: 127 VTWTTLISGYSQHDRPCDALLFFNQMLRFG--YSPNEFTLSSVIKA---AAAERRGCCGH 181
Query: 361 EM--MTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNG 414
++ + G + + L+DL R G D+A V + D V W +L G
Sbjct: 182 QLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRND-VSWNALIAG 236
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 254 bits (650), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 130/372 (34%), Positives = 218/372 (58%), Gaps = 15/372 (4%)
Query: 142 GLGGLGNAEKVFDEMRERN----VVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNA 197
GLG + +++ + N + +A+I Y + + A +FD M +++V SW A
Sbjct: 282 GLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTA 341
Query: 198 LIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIH 257
++ G Q G E +++F +M + P+ TL A+SAC + S L+ G H
Sbjct: 342 MVVGYGQTGRAEEAVKIFLDMQRSGID-------PDHYTLGQAISACANVSSLEEGSQFH 394
Query: 258 GYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVF-EMNPDKGLTSWNSMINCFALHGQS 316
G + +SNSLV +YGKCG++ + ++F EMN + SW +M++ +A G++
Sbjct: 395 GKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNV-RDAVSWTAMVSAYAQFGRA 453
Query: 317 EGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHY 376
I +F++MV+ G ++PDGVT G+++AC+ GLVE+G YF++MT EYGI P I HY
Sbjct: 454 VETIQLFDKMVQHG--LKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHY 511
Query: 377 GCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDP 436
C++DL R+GR +EAM + GM PD + W +L + C+ G ++ ++AA+ L+E+DP
Sbjct: 512 SCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDP 571
Query: 437 HNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSP 496
H+ +L+++Y GKWD V + R ++++ K PG SWI+ ++H F + D+SSP
Sbjct: 572 HHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSP 631
Query: 497 KAEELYSVLESL 508
+++Y+ LE L
Sbjct: 632 YLDQIYAKLEEL 643
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 195/452 (43%), Gaps = 57/452 (12%)
Query: 13 LGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSPNIYL 72
LG N ++K + ++ F +V AL S+ YARR+FD + PN++
Sbjct: 16 LGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSS-TYARRVFDRIPQPNLFS 74
Query: 73 YTS---------------STF----------------------------SLFRRMLCNSN 89
+ + STF + M+ + +
Sbjct: 75 WNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFS 134
Query: 90 PTTTRPNNFIYPHVLKSCHESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNA 149
TR + S +H Q++K GFE Y +V + L+ Y+ +G + +A
Sbjct: 135 ANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYAN-VGCISDA 193
Query: 150 EKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFS 209
+KVF + +RN V + +++ G G ++ AL+LF M E+D SW A+I G QNG
Sbjct: 194 KKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAK 252
Query: 210 EGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDS 269
E I FREM K + L ACG + GK IH + + +F
Sbjct: 253 EAIECFREMKVQGL-------KMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHI 305
Query: 270 FISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVEC 329
++ ++L+DMY KC L A+ VF+ K + SW +M+ + G++E A+ +F M
Sbjct: 306 YVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRS 365
Query: 330 GGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRF 389
G D PD T ++AC + +E+G S F G+ + LV L G+ G
Sbjct: 366 GID--PDHYTLGQAISACANVSSLEEG-SQFHGKAITSGLIHYVTVSNSLVTLYGKCGDI 422
Query: 390 DEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRT 421
D++ + M++ D V W ++ + +GR
Sbjct: 423 DDSTRLFNEMNVR-DAVSWTAMVSAYAQFGRA 453
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 104/242 (42%), Gaps = 42/242 (17%)
Query: 55 LPYARRIFDHLHSPNIYLYTSSTFSLFR--------RMLCNSNPTTTRPNNFIYPHVLKS 106
L YA+ +FD + N+ +T+ + ++ + + P+++ + +
Sbjct: 321 LHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISA 380
Query: 107 CHESRST---GAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVS 163
C S H + + +G Y V +LV Y + G + ++ ++F+EM R+ VS
Sbjct: 381 CANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGK-CGDIDDSTRLFNEMNVRDAVS 439
Query: 164 FTAMISGYARVGDVDSALKLFDEMPER----DVPSWNALIAGCTQNGFFSEGIRLFREMV 219
+TAM+S YA+ G ++LFD+M + D + +I+ C++ G +G R F+ M
Sbjct: 440 WTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMT 499
Query: 220 A----LAAERGYRCN----------------------KPNPVTLVCALSACGHTSMLQLG 253
+ + + Y C P+ + LSAC + L++G
Sbjct: 500 SEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIG 559
Query: 254 KW 255
KW
Sbjct: 560 KW 561
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 254 bits (649), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 136/415 (32%), Positives = 225/415 (54%), Gaps = 15/415 (3%)
Query: 99 IYPHVLKSCHESRSTGAV---HAQIVKTGFEQYPIVQTALVDSYSR-GLGGLGNAEKVFD 154
+ VL+SC ++ V HAQI K G+ YP + + V +Y R L ++
Sbjct: 32 MLKQVLESCKAPSNSKCVLQAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRLLLWF 91
Query: 155 EMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRL 214
V + +I ++G+ A K+ +++V +WN +I G +N + E ++
Sbjct: 92 LSLSPGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKA 151
Query: 215 FREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNS 274
+ M++ KPN + +L+AC L KW+H + + +++ +S++
Sbjct: 152 LKNMLSFTD------IKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSA 205
Query: 275 LVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVR 334
LVD+Y KCG++ +R+VF ++ WN+MI FA HG + AI VF +M V
Sbjct: 206 LVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEME--AEHVS 263
Query: 335 PDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAME 394
PD +TF+GLL C+H GL+E+G YF +M+R + I+P++EHYG +VDLLGRAGR EA E
Sbjct: 264 PDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYE 323
Query: 395 VVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGK 454
++ M +EPD V+W SL + + Y +L E A + L + +G Y ++L+N+Y K
Sbjct: 324 LIESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNLSK--AKSGDY-VLLSNIYSSTKK 380
Query: 455 WDEVRNVWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESLI 509
W+ + V ++ ++ K G SW+E +H+F + D S + + +Y VLE LI
Sbjct: 381 WESAQKVRELMSKEGIRKAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLI 435
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 251 bits (642), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 167/577 (28%), Positives = 268/577 (46%), Gaps = 111/577 (19%)
Query: 2 KPNLNEQVLTILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRI 61
+ +L L +L K +N L+Q+QA + +F K A+ L + Y+ +
Sbjct: 33 RGDLERDFLFLLKKCISVNQLRQIQAQMLLHSVEKPNFLIPK-----AVELGDFNYSSFL 87
Query: 62 FDHLHSPNIYLYT-------------SSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCH 108
F PN Y + + SL+RRM + +P+ F Y V +C
Sbjct: 88 FSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRM----KFSGLKPDKFTYNFVFIACA 143
Query: 109 ESRSTG---AVHAQIVKTGFEQYPIVQTALVDSYSR------------------------ 141
+ G +VH+ + K G E+ + +L+ Y++
Sbjct: 144 KLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNS 203
Query: 142 ---GLGGLGNAEKVFDEMR----------ERNVVSF------------------------ 164
G G A+ D R ER +VS
Sbjct: 204 MISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKK 263
Query: 165 --------TAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFR 216
+ +IS Y + GD+DSA ++F++M ++D +W A+I +QNG SE +LF
Sbjct: 264 IGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFF 323
Query: 217 EMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLV 276
EM P+ TL LSACG L+LGK I + + + +++ LV
Sbjct: 324 EMEKTGV-------SPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLV 376
Query: 277 DMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPD 336
DMYGKCG + A +VFE P K +WN+MI +A G ++ A+ +F++M V P
Sbjct: 377 DMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM-----SVPPS 431
Query: 337 GVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVV 396
+TF+G+L+AC H GLV QGC YF M+ +G+ P+IEHY ++DLL RAG DEA E +
Sbjct: 432 DITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFM 491
Query: 397 RGMSMEPDEVVWGSLFNGCKVYGRTDLA--EFAAKKLLEI-DPHNGGYGIMLANVYGELG 453
+PDE++ ++ C + R D+A E A + L+E+ + N G ++ +NV ++
Sbjct: 492 ERFPGKPDEIMLAAILGAC--HKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMK 549
Query: 454 KWDEVRNVWRILKQQKSYKVPGCSWIEIDDQVHQFFS 490
WDE + +++ + K PGCSWIEI+ ++ +F +
Sbjct: 550 MWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLA 586
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 158/519 (30%), Positives = 265/519 (51%), Gaps = 55/519 (10%)
Query: 6 NEQVLTILGKSNHLNHLKQLQAHL--TTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFD 63
++ +L+++ S HL+Q+ A L T+L F+ F +L ++ Y+ R+F
Sbjct: 11 DDHLLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFS 70
Query: 64 HLHSPN-------IYLYTSST-----FSLFRRMLCNSN-PTTTRPNNFIYPHVLKSCHES 110
+P I ++ S F LFR + NS+ P ++F LK C
Sbjct: 71 QRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSF----ALKCC--- 123
Query: 111 RSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISG 170
+K+G LGGL K+F + + + T ++
Sbjct: 124 ----------IKSG----------------DLLGGLQIHGKIFSDGFLSDSLLMTTLMDL 157
Query: 171 YARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCN 230
Y+ + A K+FDE+P+RD SWN L + +N + + LF +M C
Sbjct: 158 YSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKM----KNDVDGCV 213
Query: 231 KPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARK 290
KP+ VT + AL AC + L GK +H ++ +N +SN+LV MY +CG++ A +
Sbjct: 214 KPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQ 273
Query: 291 VFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHG 350
VF ++ + SW ++I+ A++G + AI F +M++ G + P+ T GLL+AC+H
Sbjct: 274 VFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFG--ISPEEQTLTGLLSACSHS 331
Query: 351 GLVEQGCSYFEMM-TREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWG 409
GLV +G +F+ M + E+ I+P + HYGC+VDLLGRA D+A +++ M M+PD +W
Sbjct: 332 GLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWR 391
Query: 410 SLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQK 469
+L C+V+G +L E L+E+ G ++L N Y +GKW++V + ++K+++
Sbjct: 392 TLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKR 451
Query: 470 SYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESL 508
+ PGCS IE+ VH+F D S P+ EE+Y +L +
Sbjct: 452 IHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEI 490
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 164/479 (34%), Positives = 251/479 (52%), Gaps = 39/479 (8%)
Query: 17 NHLNHLKQLQAHLTTLGHA--HTDFYAFKLVRFCAL----TLSNLP-YARRIFDHLHSPN 69
++L + QL +H TT G H + KL F L +L P +A ++D L +
Sbjct: 48 SNLKIIHQLHSHFTTSGFLLLHQKQNSGKLFLFNPLLRCYSLGETPLHAYFLYDQLQRLH 107
Query: 70 IYLYTSSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESR-----STGAVHAQIVKTG 124
L + N + ++F Y +LK+ R +H +K G
Sbjct: 108 F--------------LSDHNKSLPPFDSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLG 153
Query: 125 FEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLF 184
FE + VQTALV Y G G + +A KVFDEM ERN V++ MI+G +GD + AL
Sbjct: 154 FESHVYVQTALVGMYLVG-GNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFL 212
Query: 185 DEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSAC 244
++MP R V SW +I G + E I LF MVA A KPN +T++ L A
Sbjct: 213 EKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDA------IKPNEITILAILPAV 266
Query: 245 GHTSMLQLGKWIHGYVYKNDFF-VDSFISNSLVDMYGKCGNLALARKVFEMNPD--KGLT 301
+ L++ +H YV K F D ++NSL+D Y KCG + A K F P+ K L
Sbjct: 267 WNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLV 326
Query: 302 SWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQG-CSYF 360
SW +MI+ FA+HG + A+++F+ M G ++P+ VT + +LNAC+HGGL E+ +F
Sbjct: 327 SWTTMISAFAIHGMGKEAVSMFKDMERLG--LKPNRVTMISVLNACSHGGLAEEEFLEFF 384
Query: 361 EMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGR 420
M EY I P ++HYGCLVD+L R GR +EA ++ + +E VVW L C VY
Sbjct: 385 NTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDD 444
Query: 421 TDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVPGCSWI 479
+LAE +KL+E++ +GG ++++N++ G++ + + + + + K+PG S +
Sbjct: 445 AELAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 156/483 (32%), Positives = 243/483 (50%), Gaps = 45/483 (9%)
Query: 58 ARRIFDHLHSPNIYLYTSST------------FSLFRRMLCNSNPTTTRPNNFIYPHVLK 105
AR +FD + N+ +T+ F LF RM + N+ + K
Sbjct: 227 ARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRM---RQEGDVKVNSNTLAVMFK 283
Query: 106 SCHE---SRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVV 162
+C + R +H + + E + +L+ YS+ LG +G A+ VF M+ ++ V
Sbjct: 284 ACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSK-LGYMGEAKAVFGVMKNKDSV 342
Query: 163 SFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLF------- 215
S+ ++I+G + + A +LF++MP +D+ SW +I G + G S+ + LF
Sbjct: 343 SWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKD 402
Query: 216 ----REMVALAAERGYRCNK-------------PNPVTLVCALSACGHTSMLQLGKWIHG 258
M++ GY PN T LSA + L G IHG
Sbjct: 403 NITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHG 462
Query: 259 YVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEG 318
V K + D + NSLV MY KCGN A K+F + + S+N+MI+ ++ +G +
Sbjct: 463 RVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKK 522
Query: 319 AIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGC 378
A+ +F M+E G P+GVTF+ LL+AC H G V+ G YF+ M Y IEP +HY C
Sbjct: 523 ALKLF-SMLESSGK-EPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYAC 580
Query: 379 LVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHN 438
+VDLLGR+G D+A ++ M +P VWGSL + K + R DLAE AAKKL+E++P +
Sbjct: 581 MVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDS 640
Query: 439 GGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKA 498
++L+ +Y +GK + + I K ++ K PG SWI + +VH F + D+S
Sbjct: 641 ATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNL 700
Query: 499 EEL 501
EE+
Sbjct: 701 EEI 703
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 119/264 (45%), Gaps = 18/264 (6%)
Query: 130 IVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPE 189
+ L+ Y R G A +VF M + VVS ++M+ GY ++G + A LFD M E
Sbjct: 178 VASNVLLSGYLRA-GKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTE 236
Query: 190 RDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSM 249
R+V +W A+I G + GFF +G LF M R K N TL AC
Sbjct: 237 RNVITWTAMIDGYFKAGFFEDGFGLFLRM------RQEGDVKVNSNTLAVMFKACRDFVR 290
Query: 250 LQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINC 309
+ G IHG V + D F+ NSL+ MY K G + A+ VF + +K SWNS+I
Sbjct: 291 YREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITG 350
Query: 310 FALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGI 369
Q A +FE+M D V++ ++ + G + + F MM + I
Sbjct: 351 LVQRKQISEAYELFEKMPG------KDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNI 404
Query: 370 EPQIEHYGCLVDLLGRAGRFDEAM 393
+ ++ G ++EA+
Sbjct: 405 T-----WTAMISAFVSNGYYEEAL 423
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 169/391 (43%), Gaps = 53/391 (13%)
Query: 65 LHSPNIYLYTSSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTGAVHAQIVKTG 124
++ NI L +ST ++ N P T + NF L++ S + ++QI K
Sbjct: 12 IYRHNICLRCNSTLAV-----SNHEPITQKTRNF-----LETTTTSTAIFQCNSQISK-- 59
Query: 125 FEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLF 184
++R G L AE +F +M R++VS+ AMIS YA G + A ++F
Sbjct: 60 --------------HARN-GNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVF 104
Query: 185 DEMPERDVPSWNALIAGCTQNGF-FSEGIRLF-----REMVALAAE-----RGYRCNKP- 232
DEMP R S+NA+I +N + LF + V+ A R R ++
Sbjct: 105 DEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAE 164
Query: 233 -----NPVTLVCALSACGHTS-MLQLGKWIHGYVYKNDFFVDSFIS-NSLVDMYGKCGNL 285
PV ++++ S L+ GKW V +S +S+V Y K G +
Sbjct: 165 FLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRI 224
Query: 286 ALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLN 345
AR +F+ ++ + +W +MI+ + G E +F +M + GDV+ + T +
Sbjct: 225 VDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQ-EGDVKVNSNTLAVMFK 283
Query: 346 ACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDE 405
AC +G +++R +E + L+ + + G EA + V G+ D
Sbjct: 284 ACRDFVRYREGSQIHGLVSR-MPLEFDLFLGNSLMSMYSKLGYMGEA-KAVFGVMKNKDS 341
Query: 406 VVWGSLFNGCKVYGRTDLAEFAAKKLLEIDP 436
V W SL G + R ++E A +L E P
Sbjct: 342 VSWNSLITG--LVQRKQISE--AYELFEKMP 368
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 129/342 (37%), Positives = 206/342 (60%), Gaps = 9/342 (2%)
Query: 167 MISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERG 226
++ Y + ++ A ++F+ + +DV SW ++I+ NG SE + LFR MV E G
Sbjct: 527 LVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMV----ETG 582
Query: 227 YRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLA 286
+ V L+C LSA S L G+ IH Y+ + F ++ I+ ++VDMY CG+L
Sbjct: 583 L---SADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQ 639
Query: 287 LARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNA 346
A+ VF+ KGL + SMIN + +HG + A+ +F++M +V PD ++F+ LL A
Sbjct: 640 SAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRH--ENVSPDHISFLALLYA 697
Query: 347 CTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEV 406
C+H GL+++G + ++M EY +EP EHY CLVD+LGRA EA E V+ M EP
Sbjct: 698 CSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAE 757
Query: 407 VWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILK 466
VW +L C+ + ++ E AA++LLE++P N G ++++NV+ E G+W++V V +K
Sbjct: 758 VWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMK 817
Query: 467 QQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESL 508
K PGCSWIE+D +VH+F + D+S P+++E+Y L +
Sbjct: 818 ASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEV 859
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 149/356 (41%), Gaps = 64/356 (17%)
Query: 9 VLTILGKSNHLNHLKQLQAHL-TTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHS 67
VL + GK ++ +QL + + T DF A KLV F +L A ++FD +
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLV-FMYGKCGSLDDAEKVFDEMPD 144
Query: 68 PNIYLYTS------------STFSLFRRMLCNSNPTTTRPNNFIYPHVLKSC---HESRS 112
+ + + S +L+ M P +P +LK+C + RS
Sbjct: 145 RTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSS----FPALLKACAKLRDIRS 200
Query: 113 TGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYA 172
+H+ +VK G+ + ALV S YA
Sbjct: 201 GSELHSLLVKLGYHSTGFIVNALV--------------------------------SMYA 228
Query: 173 RVGDVDSALKLFDEMPER-DVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNK 231
+ D+ +A +LFD E+ D WN++++ + +G E + LFREM
Sbjct: 229 KNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGP-------A 281
Query: 232 PNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDS-FISNSLVDMYGKCGNLALARK 290
PN T+V AL+AC S +LGK IH V K+ ++ N+L+ MY +CG + A +
Sbjct: 282 PNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAER 341
Query: 291 VFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNA 346
+ + + +WNS+I + + + A+ F M+ G + D V+ ++ A
Sbjct: 342 ILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGH--KSDEVSMTSIIAA 395
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 110/245 (44%), Gaps = 11/245 (4%)
Query: 171 YARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCN 230
Y + G +D A K+FDEMP+R +WN +I NG + + L+ M G
Sbjct: 126 YGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLS-- 183
Query: 231 KPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARK 290
+ L AC ++ G +H + K + FI N+LV MY K +L+ AR+
Sbjct: 184 -----SFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARR 238
Query: 291 VFEMNPDKG-LTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTH 349
+F+ +KG WNS+++ ++ G+S + +F +M G P+ T V L AC
Sbjct: 239 LFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGP--APNSYTIVSALTACDG 296
Query: 350 GGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWG 409
+ G + + ++ L+ + R G+ +A ++R M+ D V W
Sbjct: 297 FSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWN 355
Query: 410 SLFNG 414
SL G
Sbjct: 356 SLIKG 360
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 111/460 (24%), Positives = 182/460 (39%), Gaps = 109/460 (23%)
Query: 24 QLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSPN--------IYLYTS 75
+L + L LG+ T F LV A +L ARR+FD + Y++
Sbjct: 203 ELHSLLVKLGYHSTGFIVNALVSMYAKN-DDLSAARRLFDGFQEKGDAVLWNSILSSYST 261
Query: 76 S-----TFSLFRRMLCNSNPTTTRPNNFIYPHVLKSC---HESRSTGAVHAQIVKTGFEQ 127
S T LFR M + T PN++ L +C ++ +HA ++K+
Sbjct: 262 SGKSLETLELFREM----HMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHS 317
Query: 128 YPI-VQTALVDSYSRGLGGLGNAEKVFDEMRERNVV------------------------ 162
+ V AL+ Y+R G + AE++ +M +VV
Sbjct: 318 SELYVCNALIAMYTR-CGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSD 376
Query: 163 -----------SFTAMISGYARVGDVDSALKL---------------------------- 183
S T++I+ R+ ++ + ++L
Sbjct: 377 MIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNL 436
Query: 184 -------FDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVT 236
F M ++D+ SW +IAG QN E + LFR++ E + +
Sbjct: 437 TCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRME-------IDEMI 489
Query: 237 LVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNP 296
L L A + + K IH ++ + +D+ I N LVD+YGKC N+ A +VFE
Sbjct: 490 LGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIK 548
Query: 297 DKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQG 356
K + SW SMI+ AL+G A+ +F +MVE G + D V + +L+A + +G
Sbjct: 549 GKDVVSWTSMISSSALNGNESEAVELFRRMVETG--LSADSVALLCILSAAASLSALNKG 606
Query: 357 CSYFEMMTRE-YGIEPQI-----EHYGCLVDLLGRAGRFD 390
+ R+ + +E I + Y C DL FD
Sbjct: 607 REIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFD 646
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 85/188 (45%), Gaps = 16/188 (8%)
Query: 241 LSACGHTSMLQLGKWIHGYVYKN--DFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDK 298
L CG + G+ +H ++K F +D F++ LV MYGKCG+L A KVF+ PD+
Sbjct: 87 LELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFDEMPDR 145
Query: 299 GLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGV-----TFVGLLNACTHGGLV 353
+WN+MI + +G+ A+A++ M R +GV +F LL AC +
Sbjct: 146 TAFAWNTMIGAYVSNGEPASALALYWNM-------RVEGVPLGLSSFPALLKACAKLRDI 198
Query: 354 EQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFN 413
G ++ + G LV + + A + G + D V+W S+ +
Sbjct: 199 RSGSELHSLLVK-LGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILS 257
Query: 414 GCKVYGRT 421
G++
Sbjct: 258 SYSTSGKS 265
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 92/211 (43%), Gaps = 24/211 (11%)
Query: 54 NLPYARRIFDHLHSPNIYLYTSSTFS------------LFRRMLCNSNPTTTRPNNFIYP 101
N+ YA R+F+ + ++ +TS S LFRRM+ + I
Sbjct: 536 NMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILS 595
Query: 102 HVLKSCHESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNV 161
++ +H +++ GF + A+VD Y+ G L +A+ VFD + + +
Sbjct: 596 AAASLSALNKGR-EIHCYLLRKGFCLEGSIAVAVVDMYA-CCGDLQSAKAVFDRIERKGL 653
Query: 162 VSFTAMISGYARVGDVDSALKLFDEMPERDVP----SWNALIAGCTQNGFFSEGIRLFRE 217
+ +T+MI+ Y G +A++LFD+M +V S+ AL+ C+ G EG +
Sbjct: 654 LQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKI 713
Query: 218 MVALAAERGYRCNKPNPVTLVCALSACGHTS 248
M E Y +P P VC + G +
Sbjct: 714 M-----EHEYEL-EPWPEHYVCLVDMLGRAN 738
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 209/379 (55%), Gaps = 15/379 (3%)
Query: 131 VQTALVD-SYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPE 189
V T L D + +GL G + ++ N A+I YA+ G+V +LK+F M
Sbjct: 417 VSTRLADLKFGKGLHSNGIKSGICIDLSVSN-----ALIDMYAKCGEVGDSLKIFSSMGT 471
Query: 190 RDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSM 249
D +WN +I+ C + G F+ G+++ +M P+ T + L C +
Sbjct: 472 GDTVTWNTVISACVRFGDFATGLQVTTQMRKSEV-------VPDMATFLVTLPMCASLAA 524
Query: 250 LQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINC 309
+LGK IH + + + + I N+L++MY KCG L + +VFE + + +W MI
Sbjct: 525 KRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYA 584
Query: 310 FALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGI 369
+ ++G+ E A+ F M + G + PD V F+ ++ AC+H GLV++G + FE M Y I
Sbjct: 585 YGMYGEGEKALETFADMEKSG--IVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKI 642
Query: 370 EPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAK 429
+P IEHY C+VDLL R+ + +A E ++ M ++PD +W S+ C+ G + AE ++
Sbjct: 643 DPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSR 702
Query: 430 KLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVPGCSWIEIDDQVHQFF 489
+++E++P + GY I+ +N Y L KWD+V + + LK + K PG SWIE+ VH F
Sbjct: 703 RIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFS 762
Query: 490 SLDQSSPKAEELYSVLESL 508
S D S+P++E +Y LE L
Sbjct: 763 SGDDSAPQSEAIYKSLEIL 781
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 116/493 (23%), Positives = 209/493 (42%), Gaps = 104/493 (21%)
Query: 13 LGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLV-RFCALT--LSNLPYARRIFDHLHSP- 68
L S++LN L+++ A + +LG +DF++ KL+ ++ S+L RR+ SP
Sbjct: 14 LSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRV-----SPA 68
Query: 69 -NIYLYTS-----STFSLFRRML---CNSNPTTTRPNNFIYPHVLKSC---HESRSTGAV 116
N+YL+ S S LF L + P+ + +P V+K+C ++ V
Sbjct: 69 KNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLV 128
Query: 117 HAQIVKTG---------------------------FEQYPIVQ----TALVDSYSRGLGG 145
+ QI+ G F++ P+ +L+ YS G
Sbjct: 129 YEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSH-GY 187
Query: 146 LGNAEKVFDEMRERNVV--SFTA------------------------------------- 166
A +++ E++ +V SFT
Sbjct: 188 YEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNG 247
Query: 167 MISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERG 226
+++ Y + A ++FDEM RD S+N +I G + E +R+F E +
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQF---- 303
Query: 227 YRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLA 286
KP+ +T+ L ACGH L L K+I+ Y+ K F ++S + N L+D+Y KCG++
Sbjct: 304 ----KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMI 359
Query: 287 LARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNA 346
AR VF K SWNS+I+ + G A+ +F+ M+ + + D +T++ L++
Sbjct: 360 TARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIM--EEQADHITYLMLISV 417
Query: 347 CTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEV 406
T ++ G + GI + L+D+ + G +++++ M D V
Sbjct: 418 STRLADLKFGKGLHSNGIKS-GICIDLSVSNALIDMYAKCGEVGDSLKIFSSMG-TGDTV 475
Query: 407 VWGSLFNGCKVYG 419
W ++ + C +G
Sbjct: 476 TWNTVISACVRFG 488
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 122/258 (47%), Gaps = 11/258 (4%)
Query: 167 MISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERG 226
+I YA+ GD+ +A +F+ M +D SWN++I+G Q+G E ++LF+ M+ +
Sbjct: 348 LIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIME---- 403
Query: 227 YRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLA 286
+ + +T + +S + L+ GK +H K+ +D +SN+L+DMY KCG +
Sbjct: 404 ---EQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVG 460
Query: 287 LARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNA 346
+ K+F +WN++I+ G + V QM + +V PD TF+ L
Sbjct: 461 DSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRK--SEVVPDMATFLVTLPM 518
Query: 347 CTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEV 406
C G + R +G E +++ L+++ + G + + V MS D V
Sbjct: 519 CASLAAKRLGKEIHCCLLR-FGYESELQIGNALIEMYSKCGCLENSSRVFERMSRR-DVV 576
Query: 407 VWGSLFNGCKVYGRTDLA 424
W + +YG + A
Sbjct: 577 TWTGMIYAYGMYGEGEKA 594
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 60/107 (56%), Gaps = 5/107 (4%)
Query: 116 VHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVG 175
+H +++ G+E + AL++ YS+ G L N+ +VF+ M R+VV++T MI Y G
Sbjct: 531 IHCCLLRFGYESELQIGNALIEMYSK-CGCLENSSRVFERMSRRDVVTWTGMIYAYGMYG 589
Query: 176 DVDSALKLFDEMPER----DVPSWNALIAGCTQNGFFSEGIRLFREM 218
+ + AL+ F +M + D + A+I C+ +G EG+ F +M
Sbjct: 590 EGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKM 636
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 249 bits (636), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 125/344 (36%), Positives = 198/344 (57%), Gaps = 10/344 (2%)
Query: 166 AMISGYARVGDVDSALKLFDEMPER-DVPSWNALIAGCTQNGFFSEGIRLFREMVALAAE 224
++++ Y D+ LF++ D SWN ++ C Q+ E +RLF+ M+ E
Sbjct: 411 SLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECE 470
Query: 225 RGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGN 284
P+ +T+ L C S L+LG +H Y K + FI N L+DMY KCG+
Sbjct: 471 -------PDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGS 523
Query: 285 LALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLL 344
L AR++F+ ++ + SW+++I +A G E A+ +F++M G + P+ VTFVG+L
Sbjct: 524 LGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAG--IEPNHVTFVGVL 581
Query: 345 NACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPD 404
AC+H GLVE+G + M E+GI P EH C+VDLL RAGR +EA + M +EPD
Sbjct: 582 TACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPD 641
Query: 405 EVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRI 464
VVW +L + CK G LA+ AA+ +L+IDP N ++L +++ G W+ +
Sbjct: 642 VVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSS 701
Query: 465 LKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESL 508
+K+ K+PG SWIEI+D++H FF+ D P+ +++Y+VL ++
Sbjct: 702 MKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNI 745
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 151/377 (40%), Gaps = 60/377 (15%)
Query: 54 NLPYARRIFDHLHSPNIYLYTS------------STFSLFRRMLCNSNPTTTRPNNFIYP 101
+L AR +FD + N+ YTS L+ +ML P+ F +
Sbjct: 117 SLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKML----QEDLVPDQFAFG 172
Query: 102 HVLKSCHESRSTG---AVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRE 158
++K+C S G +HAQ++K + I Q AL+ Y R F++M +
Sbjct: 173 SIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVR-----------FNQMSD 221
Query: 159 RNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREM 218
A ++F +P +D+ SW+++IAG +Q GF E + +EM
Sbjct: 222 ---------------------ASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEM 260
Query: 219 VALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDM 278
++ PN +L AC G IHG K++ ++ SL DM
Sbjct: 261 LSFGVFH------PNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDM 314
Query: 279 YGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGV 338
Y +CG L AR+VF+ SWN +I A +G ++ A++VF QM G PD +
Sbjct: 315 YARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSG--FIPDAI 372
Query: 339 TFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRG 398
+ LL A T + QG + + +G + L+ + +
Sbjct: 373 SLRSLLCAQTKPMALSQGMQIHSYIIK-WGFLADLTVCNSLLTMYTFCSDLYCCFNLFED 431
Query: 399 MSMEPDEVVWGSLFNGC 415
D V W ++ C
Sbjct: 432 FRNNADSVSWNTILTAC 448
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 125/291 (42%), Gaps = 28/291 (9%)
Query: 145 GLGNAEKVFDEMRERNVVSFTAM----ISGYARVGDVDSALKLFDEMPERDVPSWNALIA 200
L K+ D + N T + +S Y + G + A ++FD MPER++ S+ ++I
Sbjct: 82 SLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVIT 141
Query: 201 GCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYV 260
G +QNG +E IRL+ +M+ P+ + AC +S + LGK +H V
Sbjct: 142 GYSQNGQGAEAIRLYLKMLQEDL-------VPDQFAFGSIIKACASSSDVGLGKQLHAQV 194
Query: 261 YKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAI 320
K + N+L+ MY + ++ A +VF P K L SW+S+I F+ G A+
Sbjct: 195 IKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEAL 254
Query: 321 AVFEQMVECGGDVRPDGVTFVGLLNACT------HGGLVEQGCSYFEMMTREYGIEPQIE 374
+ ++M+ G P+ F L AC+ +G + C E+
Sbjct: 255 SHLKEMLSFGV-FHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIA------ 307
Query: 375 HYGC-LVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLA 424
GC L D+ R G + A V + PD W + G G D A
Sbjct: 308 --GCSLCDMYARCGFLNSARRVFDQIE-RPDTASWNVIIAGLANNGYADEA 355
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 92/180 (51%), Gaps = 7/180 (3%)
Query: 235 VTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEM 294
++L+CA C + L G+ IH ++ ++ D+ ++N ++ MYGKCG+L AR+VF+
Sbjct: 71 ISLICA---CSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDF 127
Query: 295 NPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVE 354
P++ L S+ S+I ++ +GQ AI ++ +M++ D+ PD F ++ AC V
Sbjct: 128 MPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQ--EDLVPDQFAFGSIIKACASSSDVG 185
Query: 355 QGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNG 414
G + + I L+ + R + +A V G+ M+ D + W S+ G
Sbjct: 186 LGKQLHAQVIKLESSSHLIAQ-NALIAMYVRFNQMSDASRVFYGIPMK-DLISWSSIIAG 243
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 21/221 (9%)
Query: 80 LFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRST---GAVHAQIVKTGFEQYPIVQTALV 136
LF+ ML + P++ ++L+ C E S VH +KTG ++ L+
Sbjct: 460 LFKLMLV----SECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLI 515
Query: 137 DSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVP--- 193
D Y++ G LG A ++FD M R+VVS++ +I GYA+ G + AL LF EM +
Sbjct: 516 DMYAK-CGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNH 574
Query: 194 -SWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQL 252
++ ++ C+ G EG++L+ M E G K + +V L+ G + +
Sbjct: 575 VTFVGVLTACSHVGLVEEGLKLYATM---QTEHGISPTKEHCSCVVDLLARAGRLNEAE- 630
Query: 253 GKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFE 293
++ + D + +L+ GN+ LA+K E
Sbjct: 631 -----RFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAE 666
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 249 bits (636), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 130/366 (35%), Positives = 207/366 (56%), Gaps = 13/366 (3%)
Query: 158 ERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFRE 217
ER++ + TA++ YA+ G + A K FD + ERDV W +LI+G QN E + L+R
Sbjct: 354 ERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRR 413
Query: 218 MVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVD 277
M PN T+ L AC + L+LGK +HG+ K+ F ++ I ++L
Sbjct: 414 MKTAGI-------IPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALST 466
Query: 278 MYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDG 337
MY KCG+L VF P+K + SWN+MI+ + +GQ + A+ +FE+M+ G + PD
Sbjct: 467 MYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEG--MEPDD 524
Query: 338 VTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVR 397
VTFV +++AC+H G VE+G YF MM+ + G++P+++HY C+VDLL RAG+ EA E +
Sbjct: 525 VTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIE 584
Query: 398 GMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDE 457
+++ +W L + CK +G+ +L +A +KL+ + + L+ +Y LG+ +
Sbjct: 585 SANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRD 644
Query: 458 VRNVWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESLIGFGNEVMI 517
V VW+ ++ K GCSWIE+ +Q H F D P EE + L+ + MI
Sbjct: 645 VERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEE----TKDLVCLVSRQMI 700
Query: 518 EQQALT 523
E+ +T
Sbjct: 701 EEGFVT 706
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 125/250 (50%), Gaps = 9/250 (3%)
Query: 165 TAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAE 224
T+++ Y + G V+ LK+F MPER+ +W+ +++G G E I++F + E
Sbjct: 157 TSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEE 216
Query: 225 RGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGN 284
+ LS+ T + LG+ IH KN +SN+LV MY KC +
Sbjct: 217 -----GSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCES 271
Query: 285 LALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLL 344
L A K+F+ + D+ +W++M+ ++ +G+S A+ +F +M G ++P T VG+L
Sbjct: 272 LNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAG--IKPSEYTIVGVL 329
Query: 345 NACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPD 404
NAC+ +E+G + + G E + LVD+ +AG +A + + E D
Sbjct: 330 NACSDICYLEEGKQLHSFLLK-LGFERHLFATTALVDMYAKAGCLADARKGFDCLQ-ERD 387
Query: 405 EVVWGSLFNG 414
+W SL +G
Sbjct: 388 VALWTSLISG 397
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 115/254 (45%), Gaps = 18/254 (7%)
Query: 167 MISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEG---IRLFREMVALAA 223
+++ YA+ G + A +F+ + +DV SWN+LI G +QNG S ++LFREM A
Sbjct: 55 LVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDI 114
Query: 224 ERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCG 283
PN TL A +G+ H V K F D ++ SLV MY K G
Sbjct: 115 -------LPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAG 167
Query: 284 NLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMV---ECGGDVRPDGVTF 340
+ KVF P++ +W++M++ +A G+ E AI VF + E G D
Sbjct: 168 LVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAV 227
Query: 341 VGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMS 400
+ L A + GL Q +T + G+ + LV + + +EA ++ S
Sbjct: 228 LSSLAATIYVGLGRQ----IHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDS-S 282
Query: 401 MEPDEVVWGSLFNG 414
+ + + W ++ G
Sbjct: 283 GDRNSITWSAMVTG 296
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 154/408 (37%), Gaps = 87/408 (21%)
Query: 18 HLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSPNIYLYTS-- 75
+L KQL + L LG F LV A L AR+ FD L ++ L+TS
Sbjct: 337 YLEEGKQLHSFLLKLGFERHLFATTALVDMYA-KAGCLADARKGFDCLQERDVALWTSLI 395
Query: 76 ----------STFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRST---GAVHAQIVK 122
L+RRM PN+ VLK+C + VH +K
Sbjct: 396 SGYVQNSDNEEALILYRRM----KTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIK 451
Query: 123 TGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALK 182
GF + +AL YS+ G L + VF ++VVS+ AMISG + G D AL+
Sbjct: 452 HGFGLEVPIGSALSTMYSK-CGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALE 510
Query: 183 LFDEM----PERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLV 238
LF+EM E D ++ +I+ C+ GF G F M
Sbjct: 511 LFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSD------------------ 552
Query: 239 CALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFE-MNPD 297
Q+G D VD + +VD+ + G L A++ E N D
Sbjct: 553 ------------QIGL---------DPKVDHYA--CMVDLLSRAGQLKEAKEFIESANID 589
Query: 298 KGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNAC---------- 347
GL W +++ HG+ E + E+++ G V G+ A
Sbjct: 590 HGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVW 649
Query: 348 ----THGGLVEQGCSYFEMMTREY------GIEPQIEHYGCLVDLLGR 385
+G E GCS+ E+ + + + P IE LV L+ R
Sbjct: 650 KHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEETKDLVCLVSR 697
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 85/200 (42%), Gaps = 15/200 (7%)
Query: 232 PNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKV 291
P+ TL+ L+ L G+ +HG + + +N LV+ Y KCG LA A +
Sbjct: 12 PHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSI 71
Query: 292 FEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVEC-GGDVRPDGVTFVGLLNACTHG 350
F K + SWNS+I ++ +G + V + E D+ P+ T G+ A
Sbjct: 72 FNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKA---- 127
Query: 351 GLVEQGCSYFEMMTREYGIEPQIEHYG------CLVDLLGRAGRFDEAMEVVRGMSMEPD 404
E + + + + ++ +G LV + +AG ++ ++V M E +
Sbjct: 128 ---ESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMP-ERN 183
Query: 405 EVVWGSLFNGCKVYGRTDLA 424
W ++ +G GR + A
Sbjct: 184 TYTWSTMVSGYATRGRVEEA 203
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 249 bits (636), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 169/522 (32%), Positives = 265/522 (50%), Gaps = 73/522 (13%)
Query: 8 QVLTILGKSNHLNHLKQL--QAHLTTLGHAHTDFYAFKLVRFCALTLS-NLPYARRIFDH 64
Q L L + + HL Q+ Q HL++L + F +LVR +L+L+ +L +AR +
Sbjct: 15 QCLIFLKLCSSIKHLLQIHGQIHLSSL--QNDSFIISELVRVSSLSLAKDLAFARTLL-- 70
Query: 65 LHSPNIYLYTSSTFSLFRRMLCNSNPTT-------------TRPNNFIYPHVLKSCHESR 111
LHS + T ST+++ R +S+ +PN +P +LK+C
Sbjct: 71 LHSSD---STPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFL 127
Query: 112 STGA---VHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMI 168
A + +++K GF+ V L+ Y G +K D
Sbjct: 128 GLTAGRQIQVEVLKHGFDFDVYVGNNLIHLY-------GTCKKTSD-------------- 166
Query: 169 SGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYR 228
A K+FDEM ER+V SWN+++ +NG + F EM+ G R
Sbjct: 167 -----------ARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMI------GKR 209
Query: 229 -CNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLAL 287
C P+ T+V LSACG L LGK +H V + ++ + +LVDMY K G L
Sbjct: 210 FC--PDETTMVVLLSACGGN--LSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEY 265
Query: 288 ARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNAC 347
AR VFE DK + +W++MI A +G +E A+ +F +M++ VRP+ VTF+G+L AC
Sbjct: 266 ARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMK-ESSVRPNYVTFLGVLCAC 324
Query: 348 THGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVV 407
+H GLV+ G YF M + + I+P + HYG +VD+LGRAGR +EA + ++ M EPD VV
Sbjct: 325 SHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVV 384
Query: 408 WGSLFNGCKVYGRTD---LAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRI 464
W +L + C ++ D + E K+L+E++P G +++AN + E W E V R+
Sbjct: 385 WRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRV 444
Query: 465 LKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLE 506
+K+ K K+ G S +E+ H+FFS + +Y +L+
Sbjct: 445 MKETKMKKIAGESCLELGGSFHRFFSGYDPRSEYVSIYELLD 486
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 249 bits (635), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 127/361 (35%), Positives = 201/361 (55%), Gaps = 16/361 (4%)
Query: 158 ERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFRE 217
++++ + IS Y++ D SA LFD M R SW +I+G + G E + LF
Sbjct: 288 DQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHA 347
Query: 218 MVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHG----YVYKNDFFVDSFISN 273
M+ KP+ VTL+ +S CG L+ GKWI Y K D + I N
Sbjct: 348 MIKSG-------EKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRD---NVMICN 397
Query: 274 SLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDV 333
+L+DMY KCG++ AR +F+ P+K + +W +MI +AL+G A+ +F +M++ D
Sbjct: 398 ALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDL--DY 455
Query: 334 RPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAM 393
+P+ +TF+ +L AC H G +E+G YF +M + Y I P ++HY C+VDLLGR G+ +EA+
Sbjct: 456 KPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEAL 515
Query: 394 EVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELG 453
E++R MS +PD +WG+L N CK++ +AE AA+ L ++P + +AN+Y G
Sbjct: 516 ELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAG 575
Query: 454 KWDEVRNVWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESLIGFGN 513
WD + I+KQ+ K PG S I+++ + H F + + E +Y L L F
Sbjct: 576 MWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYFTLNGLSLFAK 635
Query: 514 E 514
+
Sbjct: 636 D 636
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 107/422 (25%), Positives = 174/422 (41%), Gaps = 109/422 (25%)
Query: 95 PNNFIYPHVLKSCHESRSTGA---VHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEK 151
PNNF +P V K+C G VHA ++K+ F V TA VD +
Sbjct: 50 PNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMF------------ 97
Query: 152 VFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEG 211
+ VD A K+F+ MPERD +WNA+++G Q+G +
Sbjct: 98 --------------------VKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKA 137
Query: 212 IRLFREMVALAAERGYRCNK--PNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDS 269
LFREM R N+ P+ VT++ + + L+L + +H + V
Sbjct: 138 FSLFREM---------RLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQV 188
Query: 270 FISNSLVDMYGKCGNLALARKVFEM--NPDKGLTSWNSMINCFALHGQSEGAIAVFEQMV 327
++N+ + YGKCG+L A+ VFE D+ + SWNSM +++ G++ A ++ M+
Sbjct: 189 TVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLML 248
Query: 328 ECGGDVRPDGVTFVGLLNAC------THGGLV--------------------------EQ 355
+ +PD TF+ L +C T G L+ E
Sbjct: 249 R--EEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSED 306
Query: 356 GCS---YFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGM---SMEPDEVVWG 409
CS F++MT + + ++ G DEA+ + M +PD V
Sbjct: 307 TCSARLLFDIMTSRTCVS-----WTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLL 361
Query: 410 SLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYG-----IMLAN----VYGELGKWDEVRN 460
SL +GC +G + ++ ID YG +M+ N +Y + G E R+
Sbjct: 362 SLISGCGKFGSLETGKW-------IDARADIYGCKRDNVMICNALIDMYSKCGSIHEARD 414
Query: 461 VW 462
++
Sbjct: 415 IF 416
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 107/232 (46%), Gaps = 17/232 (7%)
Query: 192 VPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQ 251
V +WN I E + LFREM +RG +PN T AC + +
Sbjct: 17 VNAWNLQIREAVNRNDPVESLLLFREM-----KRG--GFEPNNFTFPFVAKACARLADVG 69
Query: 252 LGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFA 311
+ +H ++ K+ F+ D F+ + VDM+ KC ++ A KVFE P++ T+WN+M++ F
Sbjct: 70 CCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFC 129
Query: 312 LHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTR---EYG 368
G ++ A ++F +M ++ PD VT + L+ + + E+ E M G
Sbjct: 130 QSGHTDKAFSLFREMRL--NEITPDSVTVMTLIQSAS----FEKSLKLLEAMHAVGIRLG 183
Query: 369 IEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVV-WGSLFNGCKVYG 419
++ Q+ + G+ G D A V + VV W S+F V+G
Sbjct: 184 VDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFG 235
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 97/229 (42%), Gaps = 52/229 (22%)
Query: 130 IVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPE 189
++ AL+D YS+ G + A +FD E+ VV++T MI+GYA G ALKLF +M +
Sbjct: 394 MICNALIDMYSK-CGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMID 452
Query: 190 RDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSM 249
D KPN +T + L AC H+
Sbjct: 453 LDY--------------------------------------KPNHITFLAVLQACAHSGS 474
Query: 250 LQLGKWIHGYVYKNDFFVDSFIS--NSLVDMYGKCGNLALARKVFE---MNPDKGLTSWN 304
L+ G W + ++ K + + + + +VD+ G+ G L A ++ PD G+ W
Sbjct: 475 LEKG-WEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGI--WG 531
Query: 305 SMINCFALHGQSEGAIAVFEQMVECGGDVRPD-GVTFVGLLNACTHGGL 352
+++N +H + + EQ E ++ P +V + N G+
Sbjct: 532 ALLNACKIHRN----VKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGM 576
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 248 bits (633), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 122/350 (34%), Positives = 204/350 (58%), Gaps = 9/350 (2%)
Query: 166 AMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAER 225
A+++ Y+R G ++ + F++ D +WNAL++G Q+G E +R+F M +
Sbjct: 631 ALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDN 690
Query: 226 GYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNL 285
N T A+ A T+ ++ GK +H + K + ++ + N+L+ MY KCG++
Sbjct: 691 -------NNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSI 743
Query: 286 ALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLN 345
+ A K F K SWN++IN ++ HG A+ F+QM+ +VRP+ VT VG+L+
Sbjct: 744 SDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIH--SNVRPNHVTLVGVLS 801
Query: 346 ACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDE 405
AC+H GLV++G +YFE M EYG+ P+ EHY C+VD+L RAG A E ++ M ++PD
Sbjct: 802 ACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDA 861
Query: 406 VVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRIL 465
+VW +L + C V+ ++ EFAA LLE++P + ++L+N+Y KWD + +
Sbjct: 862 LVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKM 921
Query: 466 KQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESLIGFGNEV 515
K++ K PG SWIE+ + +H F+ DQ+ P A+E++ + L +E+
Sbjct: 922 KEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEI 971
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 116/478 (24%), Positives = 192/478 (40%), Gaps = 107/478 (22%)
Query: 38 DFYAFKLVRFCALTLSNLPYARRIFDHLHSPNIYLYTS------------STFSLFRRML 85
DFY FK +L A ++FD + I+ + F LF RM+
Sbjct: 128 DFYLFK---------GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMV 178
Query: 86 CNSNPTTTRPNNFIYPHVLKSCHESRS----TGAVHAQIVKTGFEQYPIVQTALVDSYSR 141
+ PN + VL++C +HA+I+ G +V L+D YSR
Sbjct: 179 SEN----VTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSR 234
Query: 142 GLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAG 201
G VD A ++FD + +D SW A+I+G
Sbjct: 235 N--------------------------------GFVDLARRVFDGLRLKDHSSWVAMISG 262
Query: 202 CTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVY 261
++N +E IRLF +M L P P LSAC L++G+ +HG V
Sbjct: 263 LSKNECEAEAIRLFCDMYVLGI-------MPTPYAFSSVLSACKKIESLEIGEQLHGLVL 315
Query: 262 KNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIA 321
K F D+++ N+LV +Y GNL A +F + ++N++IN + G E A+
Sbjct: 316 KLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAME 375
Query: 322 VFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTR---------------- 365
+F++M G + PD T L+ AC+ G + +G T+
Sbjct: 376 LFKRMHLDG--LEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNL 433
Query: 366 -----------EYGIEPQIEHYGCLVDLLGRAGRFDE---AMEVVRGMSME---PDEVVW 408
+Y +E ++E+ +L G D+ + + R M +E P++ +
Sbjct: 434 YAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTY 493
Query: 409 GSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGI-MLANVYGELGKWDEVRNVWRIL 465
S+ C G +L E ++++ + Y +L ++Y +LGK D W IL
Sbjct: 494 PSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLD---TAWDIL 548
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 177/412 (42%), Gaps = 63/412 (15%)
Query: 23 KQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSPNIYLYT-------- 74
+QL A+ T LG A + L+ A +++ A F N+ L+
Sbjct: 409 QQLHAYTTKLGFASNNKIEGALLNLYA-KCADIETALDYFLETEVENVVLWNVMLVAYGL 467
Query: 75 ----SSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSC---HESRSTGAVHAQIVKTGFEQ 127
++F +FR+M PN + YP +LK+C + +H+QI+KT F+
Sbjct: 468 LDDLRNSFRIFRQM----QIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQL 523
Query: 128 YPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEM 187
V + L+D Y A++G +D+A +
Sbjct: 524 NAYVCSVLIDMY--------------------------------AKLGKLDTAWDILIRF 551
Query: 188 PERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHT 247
+DV SW +IAG TQ F + + FR+M+ +RG R ++ V L A+SAC
Sbjct: 552 AGKDVVSWTTMIAGYTQYNFDDKALTTFRQML----DRGIRSDE---VGLTNAVSACAGL 604
Query: 248 SMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMI 307
L+ G+ IH + F D N+LV +Y +CG + + FE +WN+++
Sbjct: 605 QALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALV 664
Query: 308 NCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREY 367
+ F G +E A+ VF +M G D + TF + A + ++QG ++T+
Sbjct: 665 SGFQQSGNNEEALRVFVRMNREGID--NNNFTFGSAVKAASETANMKQGKQVHAVITKT- 721
Query: 368 GIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYG 419
G + + E L+ + + G +A + +S + +EV W ++ N +G
Sbjct: 722 GYDSETEVCNALISMYAKCGSISDAEKQFLEVSTK-NEVSWNAIINAYSKHG 772
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 120/279 (43%), Gaps = 13/279 (4%)
Query: 166 AMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAER 225
A+++ YA+ D+++AL F E +V WN ++ R+FR+M
Sbjct: 429 ALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEI-- 486
Query: 226 GYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNL 285
PN T L C L+LG+ IH + K +F +++++ + L+DMY K G L
Sbjct: 487 -----VPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKL 541
Query: 286 ALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLN 345
A + K + SW +MI + + + A+ F QM++ G +R D V ++
Sbjct: 542 DTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRG--IRSDEVGLTNAVS 599
Query: 346 ACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDE 405
AC +++G G + LV L R G+ +E+ + + D
Sbjct: 600 ACAGLQALKEG-QQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESY-LAFEQTEAGDN 657
Query: 406 VVWGSLFNGCKVYGRTD--LAEFAAKKLLEIDPHNGGYG 442
+ W +L +G + G + L F ID +N +G
Sbjct: 658 IAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFG 696
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 146/374 (39%), Gaps = 50/374 (13%)
Query: 70 IYLYTSSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRST----GAVHAQIVKTGF 125
I +Y S S + + + RPN+ +L+ C ++ + +H+QI+K G
Sbjct: 57 ISVYISEDESFQEKRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGL 116
Query: 126 EQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFD 185
+ + +EK+FD Y GD+ A K+FD
Sbjct: 117 DSNGCL-----------------SEKLFD---------------FYLFKGDLYGAFKVFD 144
Query: 186 EMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSAC- 244
EMPER + +WN +I E LF MV+ PN T L AC
Sbjct: 145 EMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENV-------TPNEGTFSGVLEACR 197
Query: 245 GHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWN 304
G + + + IH + + + N L+D+Y + G + LAR+VF+ K +SW
Sbjct: 198 GGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWV 257
Query: 305 SMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMT 364
+MI+ + + AI +F M G + P F +L+AC +E G +
Sbjct: 258 AMISGLSKNECEAEAIRLFCDMYVLG--IMPTPYAFSSVLSACKKIESLEIG-EQLHGLV 314
Query: 365 REYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKV--YGRTD 422
+ G LV L G A + MS + D V + +L NG YG
Sbjct: 315 LKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS-QRDAVTYNTLINGLSQCGYGEKA 373
Query: 423 LAEFAAKKLLEIDP 436
+ F L ++P
Sbjct: 374 MELFKRMHLDGLEP 387
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 124/273 (45%), Gaps = 19/273 (6%)
Query: 83 RMLCNSNPTTTRPNNFIYPHVLKSCHES---RSTGAVHAQIVKTGFEQYPIVQTALVDSY 139
R+ N NNF + +K+ E+ + VHA I KTG++ V AL+ Y
Sbjct: 678 RVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMY 737
Query: 140 SRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDV-PSWNAL 198
++ G + +AEK F E+ +N VS+ A+I+ Y++ G AL FD+M +V P+ L
Sbjct: 738 AK-CGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTL 796
Query: 199 I---AGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGK- 254
+ + C+ G +GI F M +E G P P VC + +L K
Sbjct: 797 VGVLSACSHIGLVDKGIAYFESM---NSEYGL---SPKPEHYVCVVDMLTRAGLLSRAKE 850
Query: 255 WIHGYVYKNDFFV-DSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALH 313
+I K D V + +S +V + G A A + E+ P+ T + + N +A+
Sbjct: 851 FIQEMPIKPDALVWRTLLSACVVHKNMEIGEFA-AHHLLELEPEDSAT-YVLLSNLYAVS 908
Query: 314 GQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNA 346
+ + ++M E G P G +++ + N+
Sbjct: 909 KKWDARDLTRQKMKEKGVKKEP-GQSWIEVKNS 940
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 155/458 (33%), Positives = 233/458 (50%), Gaps = 48/458 (10%)
Query: 93 TRPNNFIYPHVLKSCHES--RSTG-AVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNA 149
+P+ +P VLKS + R G A+HA +K + V+ +LVD Y++ G L +A
Sbjct: 122 VKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKT-GQLKHA 180
Query: 150 EKVFDE-----------------------------------MRERNVVSFTAMISGYARV 174
+VF+E M ERN S++ +I GY
Sbjct: 181 FQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDS 240
Query: 175 GDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNP 234
G+++ A +LF+ MPE++V SW LI G +Q G + I + EM+ E+G KPN
Sbjct: 241 GELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEML----EKGL---KPNE 293
Query: 235 VTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEM 294
T+ LSAC + L G IHGY+ N +D I +LVDMY KCG L A VF
Sbjct: 294 YTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSN 353
Query: 295 NPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVE 354
K + SW +MI +A+HG+ AI F QM+ G +PD V F+ +L AC + V+
Sbjct: 354 MNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGE--KPDEVVFLAVLTACLNSSEVD 411
Query: 355 QGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNG 414
G ++F+ M +Y IEP ++HY +VDLLGRAG+ +EA E+V M + PD W +L+
Sbjct: 412 LGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRA 471
Query: 415 CKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVP 474
CK + AE ++ LLE+DP G I L + G +V L+++ +
Sbjct: 472 CKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSL 531
Query: 475 GCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESLIGFG 512
G S+IE+D Q+++F + D S +E+ L+ +I
Sbjct: 532 GWSYIELDGQLNKFSAGDYSHKLTQEIGLKLDEIISLA 569
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 133/332 (40%), Gaps = 58/332 (17%)
Query: 95 PNNFIYPHVLKSCHESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFD 154
P+ + ++ +C ++ S VHAQI++ G V
Sbjct: 27 PDESHFISLIHACKDTASLRHVHAQILRRG---------------------------VLS 59
Query: 155 EMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRL 214
+VS ++++ D +L +F ER+ NALI G T+N F +R
Sbjct: 60 SRVAAQLVSCSSLLKS------PDYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRH 113
Query: 215 FREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNS 274
F M+ L KP+ +T L + LG+ +H KN DSF+ S
Sbjct: 114 FILMLRLGV-------KPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLS 166
Query: 275 LVDMYGKCGNLALARKVFEMNPDK----GLTSWNSMINCFALHGQSEGAIAVFEQMVECG 330
LVDMY K G L A +VFE +PD+ + WN +IN + A +F M E
Sbjct: 167 LVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPE-- 224
Query: 331 GDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFD 390
R G ++ L+ G + + FE+M E + + L++ + G ++
Sbjct: 225 ---RNSG-SWSTLIKGYVDSGELNRAKQLFELMP-----EKNVVSWTTLINGFSQTGDYE 275
Query: 391 EAMEVVRGM---SMEPDEVVWGSLFNGCKVYG 419
A+ M ++P+E ++ + C G
Sbjct: 276 TAISTYFEMLEKGLKPNEYTIAAVLSACSKSG 307
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 130/345 (37%), Positives = 203/345 (58%), Gaps = 9/345 (2%)
Query: 165 TAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAE 224
++++ Y G+V++A K+F+EMPER+V SW A+I+G Q ++L+ +M ++
Sbjct: 159 SSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSD 218
Query: 225 RGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGN 284
PN T LSAC + L G+ +H ISNSL+ MY KCG+
Sbjct: 219 -------PNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGD 271
Query: 285 LALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLL 344
L A ++F+ +K + SWNSMI +A HG + AI +FE M+ G +PD +T++G+L
Sbjct: 272 LKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSG-TKPDAITYLGVL 330
Query: 345 NACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPD 404
++C H GLV++G +F +M E+G++P++ HY CLVDLLGR G EA+E++ M M+P+
Sbjct: 331 SSCRHAGLVKEGRKFFNLMA-EHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPN 389
Query: 405 EVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRI 464
V+WGSL C+V+G AA++ L ++P + LAN+Y +G W E V ++
Sbjct: 390 SVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKL 449
Query: 465 LKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESLI 509
+K + PGCSWIEI++ V F + D S+ + E+ VL LI
Sbjct: 450 MKDKGLKTNPGCSWIEINNYVFMFKAEDGSNCRMLEIVHVLHCLI 494
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 85/183 (46%), Gaps = 4/183 (2%)
Query: 237 LVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNP 296
L A+ +CG + G H K F D ++ +SLV +Y G + A KVFE P
Sbjct: 123 LSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMP 182
Query: 297 DKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQG 356
++ + SW +MI+ FA + + + ++ +M + D P+ TF LL+ACT G + QG
Sbjct: 183 ERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSD--PNDYTFTALLSACTGSGALGQG 240
Query: 357 CSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCK 416
S T G++ + L+ + + G +A + S D V W S+ G
Sbjct: 241 RS-VHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFS-NKDVVSWNSMIAGYA 298
Query: 417 VYG 419
+G
Sbjct: 299 QHG 301
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 102/210 (48%), Gaps = 24/210 (11%)
Query: 58 ARRIFDHLHSPNIYLYTS--STFS------LFRRMLCNSNPTTTRPNNFIYPHVLKSCHE 109
A ++F+ + N+ +T+ S F+ + ++ +T+ PN++ + +L +C
Sbjct: 174 AYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTG 233
Query: 110 SRSTG---AVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTA 166
S + G +VH Q + G + Y + +L+ Y + G L +A ++FD+ ++VVS+ +
Sbjct: 234 SGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCK-CGDLKDAFRIFDQFSNKDVVSWNS 292
Query: 167 MISGYARVGDVDSALKLFDEMPER-----DVPSWNALIAGCTQNGFFSEGIRLFREMVAL 221
MI+GYA+ G A++LF+ M + D ++ +++ C G EG + F L
Sbjct: 293 MIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFN----L 348
Query: 222 AAERGYRCNKPNPVTLVCALSACGHTSMLQ 251
AE G KP C + G +LQ
Sbjct: 349 MAEHGL---KPELNHYSCLVDLLGRFGLLQ 375
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 138/467 (29%), Positives = 233/467 (49%), Gaps = 60/467 (12%)
Query: 59 RRIFDHLHSPNIYLYT-------------SSTFSLFRRMLCNSNPTTTRPNNFIYPHVLK 105
R++FD + ++ +T + +LF M+ + PN+F + K
Sbjct: 325 RKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGH---VEPNHFTFSSAFK 381
Query: 106 SC---HESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVV 162
+C + R V Q K G V +++ + + + +A++ F+ + E+N+V
Sbjct: 382 ACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKS-DRMEDAQRAFESLSEKNLV 440
Query: 163 SFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALA 222
S+ + G R + + A KL E+ ER++ G+ F
Sbjct: 441 SYNTFLDGTCRNLNFEQAFKLLSEITEREL------------------GVSAF------- 475
Query: 223 AERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKC 282
T LS + ++ G+ IH V K + + N+L+ MY KC
Sbjct: 476 -------------TFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKC 522
Query: 283 GNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVG 342
G++ A +VF ++ + SW SMI FA HG + + F QM+E G V+P+ VT+V
Sbjct: 523 GSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEG--VKPNEVTYVA 580
Query: 343 LLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSME 402
+L+AC+H GLV +G +F M ++ I+P++EHY C+VDLL RAG +A E + M +
Sbjct: 581 ILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQ 640
Query: 403 PDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVW 462
D +VW + C+V+ T+L + AA+K+LE+DP+ I L+N+Y GKW+E +
Sbjct: 641 ADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMR 700
Query: 463 RILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESLI 509
R +K++ K GCSWIE+ D++H+F+ D + P A ++Y L+ LI
Sbjct: 701 RKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLI 747
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 114/261 (43%), Gaps = 49/261 (18%)
Query: 95 PNNFIYPHVLKSCHESRSTGAVHAQI---VKTG-FEQYPIVQTALVDSYSRGLGGLGNAE 150
PN++ Y V+++C S G + +KTG FE V +L+D + +G NA
Sbjct: 164 PNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAY 223
Query: 151 KVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSE 210
KVF D+M E +V +W +I C Q GF E
Sbjct: 224 KVF-------------------------------DKMSELNVVTWTLMITRCMQMGFPRE 252
Query: 211 GIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSF 270
IR F +MV G+ +K TL SAC L LGK +H + ++ D
Sbjct: 253 AIRFFLDMVL----SGFESDK---FTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD-- 303
Query: 271 ISNSLVDMYGKC---GNLALARKVFEMNPDKGLTSWNSMINCFALHGQ-SEGAIAVFEQM 326
+ SLVDMY KC G++ RKVF+ D + SW ++I + + + AI +F +M
Sbjct: 304 VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEM 363
Query: 327 VECGGDVRPDGVTFVGLLNAC 347
+ G V P+ TF AC
Sbjct: 364 IT-QGHVEPNHFTFSSAFKAC 383
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 119/258 (46%), Gaps = 14/258 (5%)
Query: 166 AMISGYARV---GDVDSALKLFDEMPERDVPSWNALIAGCTQN-GFFSEGIRLFREMVAL 221
+++ YA+ G VD K+FD M + V SW ALI G +N +E I LF EM+
Sbjct: 307 SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMIT- 365
Query: 222 AAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGK 281
+G+ +PN T A ACG+ S ++GK + G +K +S ++NS++ M+ K
Sbjct: 366 ---QGHV--EPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVK 420
Query: 282 CGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFV 341
+ A++ FE +K L S+N+ ++ + E A + ++ E ++ TF
Sbjct: 421 SDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITE--RELGVSAFTFA 478
Query: 342 GLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSM 401
LL+ + G + +G + + G+ L+ + + G D A V M
Sbjct: 479 SLLSGVANVGSIRKGEQIHSQVVK-LGLSCNQPVCNALISMYSKCGSIDTASRVFNFME- 536
Query: 402 EPDEVVWGSLFNGCKVYG 419
+ + W S+ G +G
Sbjct: 537 NRNVISWTSMITGFAKHG 554
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 11/204 (5%)
Query: 221 LAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYG 280
L A G R + VT L +C +LGK +H + + D DS + NSL+ +Y
Sbjct: 51 LMARDGIR--PMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYS 108
Query: 281 KCGNLALARKVFEMNP---DKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDG 337
K G+ A A VFE + + SW++M+ C+ +G+ AI VF + +E G + P+
Sbjct: 109 KSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELG--LVPND 166
Query: 338 VTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGC-LVDLLGRA-GRFDEAMEV 395
+ ++ AC++ V G + + E + GC L+D+ + F+ A +V
Sbjct: 167 YCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDV-CVGCSLIDMFVKGENSFENAYKV 225
Query: 396 VRGMSMEPDEVVWGSLFNGCKVYG 419
MS E + V W + C G
Sbjct: 226 FDKMS-ELNVVTWTLMITRCMQMG 248
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 144/343 (41%), Gaps = 31/343 (9%)
Query: 88 SNPTTTRPNNFIYPHVLKSCHESRSTGAVHAQ--IVKTGFEQYPIVQ-TALVDSYSRG-- 142
S P+ + N +L+ + GAV A + + G V ++L+ S R
Sbjct: 18 SQPSVSNRINVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARD 77
Query: 143 --LGGLGNAEKV-FDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMP---ERDVPSWN 196
LG L +A + FD E + V + ++IS Y++ GD A +F+ M +RDV SW+
Sbjct: 78 FRLGKLVHARLIEFD--IEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWS 135
Query: 197 ALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWI 256
A++A NG + I++F E + L PN + AC ++ + +G+
Sbjct: 136 AMMACYGNNGRELDAIKVFVEFLELGL-------VPNDYCYTAVIRACSNSDFVGVGRVT 188
Query: 257 HGYVYKNDFF-VDSFISNSLVDMYGKCGN-LALARKVFEMNPDKGLTSWNSMINCFALHG 314
G++ K F D + SL+DM+ K N A KVF+ + + +W MI G
Sbjct: 189 LGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMG 248
Query: 315 QSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIE 374
AI F MV G D T + +AC + G R G+ +E
Sbjct: 249 FPREAIRFFLDMVLSG--FESDKFTLSSVFSACAELENLSLGKQLHSWAIRS-GLVDDVE 305
Query: 375 HYGCLVDLLGRA---GRFDEAMEVVRGMSMEPDEVVWGSLFNG 414
LVD+ + G D+ +V M + + W +L G
Sbjct: 306 --CSLVDMYAKCSADGSVDDCRKVFDRME-DHSVMSWTALITG 345
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 148/418 (35%), Positives = 233/418 (55%), Gaps = 45/418 (10%)
Query: 94 RPNNFIYPHVLKSCH-ESRST--GAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAE 150
RP++ + P KSC SR +VH +KTG++ V ++LVD Y++ G + A
Sbjct: 113 RPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAK-CGEIVYAR 171
Query: 151 KVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSE 210
K+FDEM +RNVV+++ M+ GYA++G+ + AL LF E
Sbjct: 172 KMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEA----------------------- 208
Query: 211 GIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSF 270
LF + N + +S C ++++L+LG+ IHG K+ F SF
Sbjct: 209 ---LFENLAV------------NDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSF 253
Query: 271 ISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECG 330
+ +SLV +Y KCG A +VF P K L WN+M+ +A H ++ I +F++M G
Sbjct: 254 VGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSG 313
Query: 331 GDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFD 390
++P+ +TF+ +LNAC+H GLV++G YF+ M +E IEP +HY LVD+LGRAGR
Sbjct: 314 --MKPNFITFLNVLNACSHAGLVDEGRYYFDQM-KESRIEPTDKHYASLVDMLGRAGRLQ 370
Query: 391 EAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYG 450
EA+EV+ M ++P E VWG+L C V+ T+LA FAA K+ E+ P + G I L+N Y
Sbjct: 371 EALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYA 430
Query: 451 ELGKWDEVRNVWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESL 508
G++++ ++L+ + K G SW+E ++VH F + ++ K++E+Y L L
Sbjct: 431 ADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAEL 488
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 119/257 (46%), Gaps = 44/257 (17%)
Query: 103 VLKSCHESRSTGA---VHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRER 159
+L S +RST +H +VK+G P+V L++ YS+ ++ FD R
Sbjct: 21 LLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSK-------SQLPFDSRRA- 72
Query: 160 NVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMV 219
F++ P++ +W+++I+ QN + ++M+
Sbjct: 73 ------------------------FEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMM 108
Query: 220 ALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMY 279
A +P+ L A +C S +G+ +H K + D F+ +SLVDMY
Sbjct: 109 AGNL-------RPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMY 161
Query: 280 GKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVT 339
KCG + ARK+F+ P + + +W+ M+ +A G++E A+ +F++ + ++ + +
Sbjct: 162 AKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEAL--FENLAVNDYS 219
Query: 340 FVGLLNACTHGGLVEQG 356
F +++ C + L+E G
Sbjct: 220 FSSVISVCANSTLLELG 236
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 131/373 (35%), Positives = 216/373 (57%), Gaps = 16/373 (4%)
Query: 158 ERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFRE 217
ER++ + +++S Y G++ + LFD M ++ + SWN +I G QNGF + +FR+
Sbjct: 528 ERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQ 587
Query: 218 MVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVD 277
MV + C ++++ AC L+LG+ H Y K+ D+FI+ SL+D
Sbjct: 588 MVLYGIQL---CG----ISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLID 640
Query: 278 MYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDG 337
MY K G++ + KVF +K SWN+MI + +HG ++ AI +FE+M G + PD
Sbjct: 641 MYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHN--PDD 698
Query: 338 VTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVV- 396
+TF+G+L AC H GL+ +G Y + M +G++P ++HY C++D+LGRAG+ D+A+ VV
Sbjct: 699 LTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVA 758
Query: 397 RGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWD 456
MS E D +W SL + C+++ ++ E A KL E++P ++L+N+Y LGKW+
Sbjct: 759 EEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWE 818
Query: 457 EVRNVWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEE---LYSVLE---SLIG 510
+VR V + + + K GCSWIE++ +V F ++ EE L+S+LE S +G
Sbjct: 819 DVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMG 878
Query: 511 FGNEVMIEQQALT 523
+ + M Q L+
Sbjct: 879 YRPDTMSVQHDLS 891
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 146/304 (48%), Gaps = 47/304 (15%)
Query: 58 ARRIFDHLHSPNIYLYTSSTFSLFRRMLCNS---------NPTTTRPNNFIYPHVLKSCH 108
+R +FD L S N++ + + S R L + + T P++F YP V+K+C
Sbjct: 139 SRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACA 198
Query: 109 ESRSTG---AVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFT 165
G AVH +VKTG +V+ V GNA
Sbjct: 199 GMSDVGIGLAVHGLVVKTG-----LVEDVFV----------GNA---------------- 227
Query: 166 AMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAER 225
++S Y G V AL+LFD MPER++ SWN++I + NGF E L EM+ E
Sbjct: 228 -LVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMME---EN 283
Query: 226 GYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNL 285
G P+ TLV L C + LGK +HG+ K + ++N+L+DMY KCG +
Sbjct: 284 GDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCI 343
Query: 286 ALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLN 345
A+ +F+MN +K + SWN+M+ F+ G + G V QM+ G DV+ D VT + +
Sbjct: 344 TNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVP 403
Query: 346 ACTH 349
C H
Sbjct: 404 VCFH 407
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 123/259 (47%), Gaps = 10/259 (3%)
Query: 165 TAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAE 224
T +I+ YA G D + +FD + +++ WNA+I+ ++N + E + F EM++
Sbjct: 124 TRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDL 183
Query: 225 RGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGN 284
P+ T C + AC S + +G +HG V K D F+ N+LV YG G
Sbjct: 184 L------PDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGF 237
Query: 285 LALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGD--VRPDGVTFVG 342
+ A ++F++ P++ L SWNSMI F+ +G SE + + +M+E GD PD T V
Sbjct: 238 VTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVT 297
Query: 343 LLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSME 402
+L C + G + ++ ++ L+D+ + G A + + M+
Sbjct: 298 VLPVCAREREIGLGKGVHGWAVK-LRLDKELVLNNALMDMYSKCGCITNAQMIFK-MNNN 355
Query: 403 PDEVVWGSLFNGCKVYGRT 421
+ V W ++ G G T
Sbjct: 356 KNVVSWNTMVGGFSAEGDT 374
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 133/281 (47%), Gaps = 26/281 (9%)
Query: 160 NVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMV 219
N + A ++ YA+ G + A ++F + + V SWNALI G Q S RL
Sbjct: 429 NELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQ----SNDPRL----- 479
Query: 220 ALAAERGYRCNK--PNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVD 277
+L A + + P+ T+ LSAC L+LGK +HG++ +N D F+ S++
Sbjct: 480 SLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLS 539
Query: 278 MYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDG 337
+Y CG L + +F+ DK L SWN++I + +G + A+ VF QMV G ++ G
Sbjct: 540 LYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYG--IQLCG 597
Query: 338 VTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEH---YGC-LVDLLGRAGRFDEAM 393
++ + + AC+ + G Y ++ +E C L+D+ + G ++
Sbjct: 598 ISMMPVFGACSLLPSLRLGRE-----AHAYALKHLLEDDAFIACSLIDMYAKNGSITQSS 652
Query: 394 EVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEI 434
+V G+ E W ++ G YG LA+ A K E+
Sbjct: 653 KVFNGLK-EKSTASWNAMIMG---YGIHGLAKEAIKLFEEM 689
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 115/279 (41%), Gaps = 42/279 (15%)
Query: 73 YTSSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTG---AVHAQIVKTGFEQYP 129
++ +F L M+ + P+ VL C R G VH VK ++
Sbjct: 268 FSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKEL 327
Query: 130 IVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPE 189
++ AL+D YS+ G + +A +F
Sbjct: 328 VLNNALMDMYSK--------------------------------CGCITNAQMIFKMNNN 355
Query: 190 RDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSM 249
++V SWN ++ G + G + R+M+A G K + VT++ A+ C H S
Sbjct: 356 KNVVSWNTMVGGFSAEGDTHGTFDVLRQMLA-----GGEDVKADEVTILNAVPVCFHESF 410
Query: 250 LQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINC 309
L K +H Y K +F + ++N+ V Y KCG+L+ A++VF K + SWN++I
Sbjct: 411 LPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGG 470
Query: 310 FALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACT 348
A ++ QM G + PD T LL+AC+
Sbjct: 471 HAQSNDPRLSLDAHLQMKISG--LLPDSFTVCSLLSACS 507
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 18/220 (8%)
Query: 117 HAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGD 176
HA +K E + +L+D Y++ G + + KVF+ ++E++ S+ AMI GY G
Sbjct: 620 HAYALKHLLEDDAFIACSLIDMYAKN-GSITQSSKVFNGLKEKSTASWNAMIMGYGIHGL 678
Query: 177 VDSALKLFDEMPER----DVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKP 232
A+KLF+EM D ++ ++ C +G EG+R +M + G KP
Sbjct: 679 AKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQM---KSSFGL---KP 732
Query: 233 NPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKV- 291
N C + G QL K + + D I SL+ NL + KV
Sbjct: 733 NLKHYACVIDMLGRAG--QLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVA 790
Query: 292 ---FEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVE 328
FE+ P+K ++ + N +A G+ E V ++M E
Sbjct: 791 AKLFELEPEKP-ENYVLLSNLYAGLGKWEDVRKVRQRMNE 829
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 111/282 (39%), Gaps = 39/282 (13%)
Query: 164 FTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAA 223
F IS + GD+D + + E D S +A + L RE + L
Sbjct: 46 FLRRISNFCETGDLDKSFRTVQEFVGDDESSSDAFL--------------LVREALGLL- 90
Query: 224 ERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFV-DSFISNSLVDMYGKC 282
L A G +++G+ IH V + D + ++ MY C
Sbjct: 91 -----------------LQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMC 133
Query: 283 GNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVG 342
G+ +R VF+ K L WN++I+ ++ + + + F +M+ D+ PD T+
Sbjct: 134 GSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMIST-TDLLPDHFTYPC 192
Query: 343 LLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSME 402
++ AC V G + ++ + G+ + LV G G +A+++ M E
Sbjct: 193 VIKACAGMSDVGIGLAVHGLVVKT-GLVEDVFVGNALVSFYGTHGFVTDALQLFDIMP-E 250
Query: 403 PDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIM 444
+ V W S+ +V+ +E + L E+ NG M
Sbjct: 251 RNLVSWNSMI---RVFSDNGFSEESFLLLGEMMEENGDGAFM 289
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 245 bits (626), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 133/413 (32%), Positives = 227/413 (54%), Gaps = 18/413 (4%)
Query: 103 VLKSCHESRSTGAV---HAQIVKTGF---EQYPIVQTALVDSYSRGLGGLGNAEKVFDEM 156
+LK C + G V H VK G E+ P + AL+D+Y++ G + A K+F +
Sbjct: 438 LLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAK-CGNVEYAHKIFLGL 496
Query: 157 RER-NVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLF 215
ER +VS+ +++SGY G D A LF EM D+ +W+ ++ ++ +E I +F
Sbjct: 497 SERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVF 556
Query: 216 REMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSL 275
RE+ A RG R PN VT++ L C + L L + HGY+ + D + +L
Sbjct: 557 REIQA----RGMR---PNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLG-DIRLKGTL 608
Query: 276 VDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRP 335
+D+Y KCG+L A VF+ + + L + +M+ +A+HG+ + A+ ++ M E +++P
Sbjct: 609 LDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTE--SNIKP 666
Query: 336 DGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEV 395
D V +L AC H GL++ G ++ + +G++P +E Y C VDL+ R GR D+A
Sbjct: 667 DHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSF 726
Query: 396 VRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKW 455
V M +EP+ +WG+L C Y R DL A LL+ + + G ++++N+Y KW
Sbjct: 727 VTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKW 786
Query: 456 DEVRNVWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESL 508
+ V + ++K+++ K GCSW+E+D Q + F S D S P+ + ++ ++ +L
Sbjct: 787 EGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSIFDLVNAL 839
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 137/346 (39%), Gaps = 52/346 (15%)
Query: 77 TFSLFRRMLCNSNPTTTRPNNFIYPHVLKSC---HESRSTGAVHAQIVKTGFEQYPIVQT 133
T F+ M P +P++ + VL C +S + ++H+ I+K G E+ +V
Sbjct: 105 TMRFFKAMHFADEP---KPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGN 161
Query: 134 ALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDV-DSALKLFDEMPERDV 192
ALV S YA+ G + A FD + ++DV
Sbjct: 162 ALV--------------------------------SMYAKFGFIFPDAYTAFDGIADKDV 189
Query: 193 PSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTS---M 249
SWNA+IAG ++N ++ R F M+ E PN T+ L C
Sbjct: 190 VSWNAIIAGFSENNMMADAFRSFCLMLKEPTE-------PNYATIANVLPVCASMDKNIA 242
Query: 250 LQLGKWIHGYVYKNDFF-VDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMIN 308
+ G+ IH YV + + F+ NSLV Y + G + A +F K L SWN +I
Sbjct: 243 CRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIA 302
Query: 309 CFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYG 368
+A + + A +F +V GDV PD VT + +L C + G + R
Sbjct: 303 GYASNCEWFKAFQLFHNLVH-KGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSY 361
Query: 369 IEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNG 414
+ L+ R G A MS + D + W ++ +
Sbjct: 362 LLEDTSVGNALISFYARFGDTSAAYWAFSLMSTK-DIISWNAILDA 406
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 146/324 (45%), Gaps = 34/324 (10%)
Query: 158 ERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFRE 217
+ +V +++S Y RVG ++ A LF M +D+ SWN +IAG N + + +LF
Sbjct: 260 QTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHN 319
Query: 218 MVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFV-DSFISNSLV 276
+V +G P+ VT++ L C + L GK IH Y+ ++ + + D+ + N+L+
Sbjct: 320 LV----HKGDV--SPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALI 373
Query: 277 DMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALH-GQSEGAIAVFEQMVECGGDVRP 335
Y + G+ + A F + K + SWN++++ FA Q + + + E +
Sbjct: 374 SFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEA---ITL 430
Query: 336 DGVTFVGLLNAC-----------THGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLG 384
D VT + LL C HG V+ G + E EP++ + L+D
Sbjct: 431 DSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEE-------EPKLGN--ALLDAYA 481
Query: 385 RAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIM 444
+ G + A ++ G+S V + SL +G G D A+ ++ D +
Sbjct: 482 KCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWS---L 538
Query: 445 LANVYGELGKWDEVRNVWRILKQQ 468
+ +Y E +E V+R ++ +
Sbjct: 539 MVRIYAESCCPNEAIGVFREIQAR 562
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 103/253 (40%), Gaps = 14/253 (5%)
Query: 166 AMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAER 225
++++ YA+ +D K+F +M D WN ++ G + + E +R F+ M A E
Sbjct: 61 SVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCG-RETMRFFKAM-HFADE- 117
Query: 226 GYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNL 285
KP+ VT L C GK +H Y+ K D+ + N+LV MY K G +
Sbjct: 118 ----PKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFI 173
Query: 286 -ALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLL 344
A F+ DK + SWN++I F+ + A F M++ P+ T +L
Sbjct: 174 FPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLK--EPTEPNYATIANVL 231
Query: 345 NACT---HGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSM 401
C G + + ++ + LV R GR +EA + M
Sbjct: 232 PVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMG- 290
Query: 402 EPDEVVWGSLFNG 414
D V W + G
Sbjct: 291 SKDLVSWNVVIAG 303
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 75/175 (42%), Gaps = 5/175 (2%)
Query: 241 LSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGL 300
+ AC S L G+ +HG V+K S +S S+++MY KC + +K+F
Sbjct: 28 VKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLDP 87
Query: 301 TSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYF 360
WN ++ ++ E + F+ M + +P VTF +L C G G S
Sbjct: 88 VVWNIVLTGLSVSCGRE-TMRFFKAM-HFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMH 145
Query: 361 EMMTREYGIEPQIEHYGCLVDLLGRAG-RFDEAMEVVRGMSMEPDEVVWGSLFNG 414
+ + G+E LV + + G F +A G++ + D V W ++ G
Sbjct: 146 SYIIKA-GLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIA-DKDVVSWNAIIAG 198
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 245 bits (625), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 126/356 (35%), Positives = 202/356 (56%), Gaps = 11/356 (3%)
Query: 153 FDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGI 212
F + E VV+ A I+ Y + GD+ S+ KLF+++ +++ SWN +I QNG +G+
Sbjct: 163 FGVLEEVKVVN--AFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGL 220
Query: 213 RLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFIS 272
F + E P+ T + L +C +++L + IHG + F + I+
Sbjct: 221 AYFNMSRRVGHE-------PDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCIT 273
Query: 273 NSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGD 332
+L+D+Y K G L + VF +W +M+ +A HG AI FE MV G
Sbjct: 274 TALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYG-- 331
Query: 333 VRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEA 392
+ PD VTF LLNAC+H GLVE+G YFE M++ Y I+P+++HY C+VDLLGR+G +A
Sbjct: 332 ISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDA 391
Query: 393 MEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGEL 452
+++ M MEP VWG+L C+VY T L AA++L E++P +G +ML+N+Y
Sbjct: 392 YGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSAS 451
Query: 453 GKWDEVRNVWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESL 508
G W + + ++KQ+ + GCS+IE +++H+F D S P++E++ L+ +
Sbjct: 452 GLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEI 507
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 127/255 (49%), Gaps = 13/255 (5%)
Query: 167 MISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERG 226
++ Y R+G A KLFDEMPERD+ SWN+LI+G + G+ + + M + +E G
Sbjct: 72 LVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRM--MISEVG 129
Query: 227 YRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLA 286
+R PN VT + +SAC + + G+ IHG V K + + N+ ++ YGK G+L
Sbjct: 130 FR---PNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLT 186
Query: 287 LARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNA 346
+ K+FE K L SWN+MI +G +E +A F G + PD TF+ +L +
Sbjct: 187 SSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHE--PDQATFLAVLRS 244
Query: 347 CTHGGLVE--QGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPD 404
C G+V QG M G L+DL + GR +++ V ++ PD
Sbjct: 245 CEDMGVVRLAQGIHGLIMFG---GFSGNKCITTALLDLYSKLGRLEDSSTVFHEIT-SPD 300
Query: 405 EVVWGSLFNGCKVYG 419
+ W ++ +G
Sbjct: 301 SMAWTAMLAAYATHG 315
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 96/182 (52%), Gaps = 7/182 (3%)
Query: 232 PNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKV 291
N +L+ A+ +C ++L + +H V K+ + FI + LV Y + G+ A K+
Sbjct: 32 ANVSSLIAAVKSC---VSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKL 88
Query: 292 FEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGG 351
F+ P++ L SWNS+I+ ++ G V +M+ RP+ VTF+ +++AC +GG
Sbjct: 89 FDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGG 148
Query: 352 LVEQG-CSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGS 410
E+G C + +M ++G+ +++ ++ G+ G + ++ +S++ + V W +
Sbjct: 149 SKEEGRCIHGLVM--KFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIK-NLVSWNT 205
Query: 411 LF 412
+
Sbjct: 206 MI 207
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 118/262 (45%), Gaps = 31/262 (11%)
Query: 95 PNNFIYPHVLKSCHES---RSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEK 151
P+ + VL+SC + R +H I+ GF + TAL+D YS+ LG L ++
Sbjct: 233 PDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSK-LGRLEDSST 291
Query: 152 VFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPER----DVPSWNALIAGCTQNGF 207
VF E+ + +++TAM++ YA G A+K F+ M D ++ L+ C+ +G
Sbjct: 292 VFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGL 351
Query: 208 FSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFV 267
EG F M + YR + P C + G + +LQ +G + +
Sbjct: 352 VEEGKHYFETM-----SKRYRID-PRLDHYSCMVDLLGRSGLLQDA---YGLIKEMPMEP 402
Query: 268 DSFISNSLVDMYGKC--------GNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGA 319
S + +L+ G C G A A ++FE+ P G ++ + N ++ G + A
Sbjct: 403 SSGVWGALL---GACRVYKDTQLGTKA-AERLFELEPRDG-RNYVMLSNIYSASGLWKDA 457
Query: 320 IAVFEQMVECGGDVRPDGVTFV 341
+ +++ G VR G +++
Sbjct: 458 SRI-RNLMKQKGLVRASGCSYI 478
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 119/343 (34%), Positives = 202/343 (58%), Gaps = 9/343 (2%)
Query: 166 AMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAER 225
++I+ YA+ GD+ S+ LF+ + R++ +WNA++A +G E ++L +M +
Sbjct: 487 SLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSL 546
Query: 226 GYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNL 285
+ + LSA ++L+ G+ +HG K F DSFI N+ DMY KCG +
Sbjct: 547 -------DQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEI 599
Query: 286 ALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLN 345
K+ + ++ L SWN +I+ HG E A F +M+E G ++P VTFV LL
Sbjct: 600 GEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMG--IKPGHVTFVSLLT 657
Query: 346 ACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDE 405
AC+HGGLV++G +Y++M+ R++G+EP IEH C++DLLGR+GR EA + M M+P++
Sbjct: 658 ACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPND 717
Query: 406 VVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRIL 465
+VW SL CK++G D AA+ L +++P + ++ +N++ G+W++V NV + +
Sbjct: 718 LVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQM 777
Query: 466 KQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESL 508
+ K CSW+++ D+V F D++ P+ E+Y+ LE +
Sbjct: 778 GFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDI 820
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 112/249 (44%), Gaps = 11/249 (4%)
Query: 166 AMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAER 225
++IS +G+VD A +FD+M ERD SWN++ A QNG E R+F M E
Sbjct: 183 SLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDE- 241
Query: 226 GYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNL 285
N T+ LS GH + G+ IHG V K F + N+L+ MY G
Sbjct: 242 ------VNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRS 295
Query: 286 ALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLN 345
A VF+ P K L SWNS++ F G+S A+ + M+ G V + VTF L
Sbjct: 296 VEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSV--NYVTFTSALA 353
Query: 346 ACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDE 405
AC E+G ++ QI LV + G+ G E+ V+ M D
Sbjct: 354 ACFTPDFFEKGRILHGLVVVSGLFYNQIIG-NALVSMYGKIGEMSESRRVLLQMP-RRDV 411
Query: 406 VVWGSLFNG 414
V W +L G
Sbjct: 412 VAWNALIGG 420
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 121/228 (53%), Gaps = 16/228 (7%)
Query: 187 MPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGH 246
MP R+ SWN +++G + G + EG+ FR+M L KP+ + ++ACG
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGI-------KPSSFVIASLVTACGR 53
Query: 247 T-SMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNS 305
+ SM + G +HG+V K+ D ++S +++ +YG G ++ +RKVFE PD+ + SW S
Sbjct: 54 SGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTS 113
Query: 306 MINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTR 365
++ ++ G+ E I +++ M G + ++ V +++C GL++ +++ +
Sbjct: 114 LMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLV--ISSC---GLLKDESLGRQIIGQ 168
Query: 366 --EYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSL 411
+ G+E ++ L+ +LG G D A + MS E D + W S+
Sbjct: 169 VVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSI 215
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 109/490 (22%), Positives = 179/490 (36%), Gaps = 131/490 (26%)
Query: 51 TLSNLPYARRIFDHLHSPNIYLYTS---------------STFSLFRRMLCNSNPTTTRP 95
++ N+ YA IFD + + + S FSL RR N TT
Sbjct: 190 SMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVST 249
Query: 96 NNFIYPHVLKSCHESRSTGAVHAQIVKTGFEQYPIVQTALVDSYS--------------- 140
+ HV H+ G +H +VK GF+ V L+ Y+
Sbjct: 250 LLSVLGHV---DHQKWGRG-IHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQM 305
Query: 141 -------------------RGLGGLGNAEKVFDEMRERNVVSFT---------------- 165
R L LG + + N V+FT
Sbjct: 306 PTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGR 365
Query: 166 -------------------AMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNG 206
A++S Y ++G++ + ++ +MP RDV +WNALI G ++
Sbjct: 366 ILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDE 425
Query: 207 FFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHT-SMLQLGKWIHGYVYKNDF 265
+ + F+ M Y +T+V LSAC +L+ GK +H Y+ F
Sbjct: 426 DPDKALAAFQTMRVEGVSSNY-------ITVVSVLSACLLPGDLLERGKPLHAYIVSAGF 478
Query: 266 FVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQ 325
D + NSL+ MY KCG+L+ ++ +F ++ + +WN+M+ A HG E + + +
Sbjct: 479 ESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSK 538
Query: 326 MVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTR-------------------- 365
M G V D +F L+A ++E+G + +
Sbjct: 539 MRSFG--VSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKC 596
Query: 366 -EYG---------IEPQIEHYGCLVDLLGRAGRFDEAMEV---VRGMSMEPDEVVWGSLF 412
E G + + + L+ LGR G F+E + M ++P V + SL
Sbjct: 597 GEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLL 656
Query: 413 NGCKVYGRTD 422
C G D
Sbjct: 657 TACSHGGLVD 666
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 147/345 (42%), Gaps = 50/345 (14%)
Query: 81 FRRMLCNSNPTTTRPNNFIYPHVLKSCHES----RSTGAVHAQIVKTGFEQYPIVQTALV 136
F R +C+ +P++F+ ++ +C S R VH + K+G L
Sbjct: 28 FFRKMCD---LGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGL---------LS 75
Query: 137 DSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWN 196
D Y TA++ Y G V + K+F+EMP+R+V SW
Sbjct: 76 DVYVS-----------------------TAILHLYGVYGLVSCSRKVFEEMPDRNVVSWT 112
Query: 197 ALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWI 256
+L+ G + G E I +++ M G CN+ N ++LV +S+CG LG+ I
Sbjct: 113 SLMVGYSDKGEPEEVIDIYKGMRG----EGVGCNE-NSMSLV--ISSCGLLKDESLGRQI 165
Query: 257 HGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQS 316
G V K+ + NSL+ M G GN+ A +F+ ++ SWNS+ +A +G
Sbjct: 166 IGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHI 225
Query: 317 EGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHY 376
E + +F M +V + T LL+ H + G ++ + G + +
Sbjct: 226 EESFRIFSLMRRFHDEV--NSTTVSTLLSVLGHVDHQKWGRGIHGLVVK-MGFDSVVCVC 282
Query: 377 GCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRT 421
L+ + AGR EA V + M + D + W SL GR+
Sbjct: 283 NTLLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLMASFVNDGRS 326
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 11/160 (6%)
Query: 158 ERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFRE 217
E + F A Y++ G++ +K+ R +PSWN LI+ ++G+F E F E
Sbjct: 580 EHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHE 639
Query: 218 MVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSL-- 275
M+ + KP VT V L+AC H ++ G + + + DF ++ I + +
Sbjct: 640 MLEMGI-------KPGHVTFVSLLTACSHGGLVDKGLAYYDMIAR-DFGLEPAIEHCICV 691
Query: 276 VDMYGKCGNLALARKVFEMNPDK-GLTSWNSMINCFALHG 314
+D+ G+ G LA A P K W S++ +HG
Sbjct: 692 IDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHG 731
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 119/343 (34%), Positives = 202/343 (58%), Gaps = 9/343 (2%)
Query: 166 AMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAER 225
++I+ YA+ GD+ S+ LF+ + R++ +WNA++A +G E ++L +M +
Sbjct: 504 SLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSL 563
Query: 226 GYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNL 285
+ + LSA ++L+ G+ +HG K F DSFI N+ DMY KCG +
Sbjct: 564 -------DQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEI 616
Query: 286 ALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLN 345
K+ + ++ L SWN +I+ HG E A F +M+E G ++P VTFV LL
Sbjct: 617 GEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMG--IKPGHVTFVSLLT 674
Query: 346 ACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDE 405
AC+HGGLV++G +Y++M+ R++G+EP IEH C++DLLGR+GR EA + M M+P++
Sbjct: 675 ACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPND 734
Query: 406 VVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRIL 465
+VW SL CK++G D AA+ L +++P + ++ +N++ G+W++V NV + +
Sbjct: 735 LVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQM 794
Query: 466 KQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESL 508
+ K CSW+++ D+V F D++ P+ E+Y+ LE +
Sbjct: 795 GFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDI 837
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 129/244 (52%), Gaps = 16/244 (6%)
Query: 171 YARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCN 230
Y + G V A LFD MP R+ SWN +++G + G + EG+ FR+M L
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGI------- 54
Query: 231 KPNPVTLVCALSACGHT-SMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALAR 289
KP+ + ++ACG + SM + G +HG+V K+ D ++S +++ +YG G ++ +R
Sbjct: 55 KPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSR 114
Query: 290 KVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTH 349
KVFE PD+ + SW S++ ++ G+ E I +++ M G + ++ V +++C
Sbjct: 115 KVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLV--ISSC-- 170
Query: 350 GGLVEQGCSYFEMMTR--EYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVV 407
GL++ +++ + + G+E ++ L+ +LG G D A + MS E D +
Sbjct: 171 -GLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMS-ERDTIS 228
Query: 408 WGSL 411
W S+
Sbjct: 229 WNSI 232
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 112/249 (44%), Gaps = 11/249 (4%)
Query: 166 AMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAER 225
++IS +G+VD A +FD+M ERD SWN++ A QNG E R+F M E
Sbjct: 200 SLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDE- 258
Query: 226 GYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNL 285
N T+ LS GH + G+ IHG V K F + N+L+ MY G
Sbjct: 259 ------VNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRS 312
Query: 286 ALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLN 345
A VF+ P K L SWNS++ F G+S A+ + M+ G V + VTF L
Sbjct: 313 VEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSV--NYVTFTSALA 370
Query: 346 ACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDE 405
AC E+G ++ QI LV + G+ G E+ V+ M D
Sbjct: 371 ACFTPDFFEKGRILHGLVVVSGLFYNQIIG-NALVSMYGKIGEMSESRRVLLQMP-RRDV 428
Query: 406 VVWGSLFNG 414
V W +L G
Sbjct: 429 VAWNALIGG 437
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 109/490 (22%), Positives = 179/490 (36%), Gaps = 131/490 (26%)
Query: 51 TLSNLPYARRIFDHLHSPNIYLYTS---------------STFSLFRRMLCNSNPTTTRP 95
++ N+ YA IFD + + + S FSL RR N TT
Sbjct: 207 SMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVST 266
Query: 96 NNFIYPHVLKSCHESRSTGAVHAQIVKTGFEQYPIVQTALVDSYS--------------- 140
+ HV H+ G +H +VK GF+ V L+ Y+
Sbjct: 267 LLSVLGHV---DHQKWGRG-IHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQM 322
Query: 141 -------------------RGLGGLGNAEKVFDEMRERNVVSFT---------------- 165
R L LG + + N V+FT
Sbjct: 323 PTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGR 382
Query: 166 -------------------AMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNG 206
A++S Y ++G++ + ++ +MP RDV +WNALI G ++
Sbjct: 383 ILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDE 442
Query: 207 FFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHT-SMLQLGKWIHGYVYKNDF 265
+ + F+ M Y +T+V LSAC +L+ GK +H Y+ F
Sbjct: 443 DPDKALAAFQTMRVEGVSSNY-------ITVVSVLSACLLPGDLLERGKPLHAYIVSAGF 495
Query: 266 FVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQ 325
D + NSL+ MY KCG+L+ ++ +F ++ + +WN+M+ A HG E + + +
Sbjct: 496 ESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSK 555
Query: 326 MVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTR-------------------- 365
M G V D +F L+A ++E+G + +
Sbjct: 556 MRSFG--VSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKC 613
Query: 366 -EYG---------IEPQIEHYGCLVDLLGRAGRFDEAMEV---VRGMSMEPDEVVWGSLF 412
E G + + + L+ LGR G F+E + M ++P V + SL
Sbjct: 614 GEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLL 673
Query: 413 NGCKVYGRTD 422
C G D
Sbjct: 674 TACSHGGLVD 683
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 147/345 (42%), Gaps = 50/345 (14%)
Query: 81 FRRMLCNSNPTTTRPNNFIYPHVLKSCHES----RSTGAVHAQIVKTGFEQYPIVQTALV 136
F R +C+ +P++F+ ++ +C S R VH + K+G L
Sbjct: 45 FFRKMCD---LGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGL---------LS 92
Query: 137 DSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWN 196
D Y TA++ Y G V + K+F+EMP+R+V SW
Sbjct: 93 DVYVS-----------------------TAILHLYGVYGLVSCSRKVFEEMPDRNVVSWT 129
Query: 197 ALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWI 256
+L+ G + G E I +++ M G CN+ N ++LV +S+CG LG+ I
Sbjct: 130 SLMVGYSDKGEPEEVIDIYKGMRG----EGVGCNE-NSMSLV--ISSCGLLKDESLGRQI 182
Query: 257 HGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQS 316
G V K+ + NSL+ M G GN+ A +F+ ++ SWNS+ +A +G
Sbjct: 183 IGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHI 242
Query: 317 EGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHY 376
E + +F M +V + T LL+ H + G ++ + G + +
Sbjct: 243 EESFRIFSLMRRFHDEV--NSTTVSTLLSVLGHVDHQKWGRGIHGLVVK-MGFDSVVCVC 299
Query: 377 GCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRT 421
L+ + AGR EA V + M + D + W SL GR+
Sbjct: 300 NTLLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLMASFVNDGRS 343
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 11/160 (6%)
Query: 158 ERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFRE 217
E + F A Y++ G++ +K+ R +PSWN LI+ ++G+F E F E
Sbjct: 597 EHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHE 656
Query: 218 MVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSL-- 275
M+ + KP VT V L+AC H ++ G + + + DF ++ I + +
Sbjct: 657 MLEMGI-------KPGHVTFVSLLTACSHGGLVDKGLAYYDMIAR-DFGLEPAIEHCICV 708
Query: 276 VDMYGKCGNLALARKVFEMNPDK-GLTSWNSMINCFALHG 314
+D+ G+ G LA A P K W S++ +HG
Sbjct: 709 IDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHG 748
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 157/497 (31%), Positives = 248/497 (49%), Gaps = 64/497 (12%)
Query: 32 LGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSPNIYLYTS------------STFS 79
LG A F LV + L + AR++FD + PN+ +TS + S
Sbjct: 58 LGFASDTFTVNHLV-ISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALS 116
Query: 80 LFRRMLCNSNPTTTRPNNFIYPHVLKSCH---ESRSTGAVHAQIVKTGFEQYPIVQTALV 136
+F++M PN + + V K+C ESR +HA++ +G + +V ++LV
Sbjct: 117 MFQKM---HEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLV 173
Query: 137 DSYSRGLGGLGNAEKVFDEM--RERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPS 194
D Y + + A +VFD M RNVVS+T+MI+ YA
Sbjct: 174 DMYGK-CNDVETARRVFDSMIGYGRNVVSWTSMITAYA---------------------- 210
Query: 195 WNALIAGCTQNGFFSEGIRLFREM-VALAAERGYRCNKPNPVTLVCALSACGHTSMLQLG 253
QN E I LFR AL ++R N L +SAC LQ G
Sbjct: 211 ---------QNARGHEAIELFRSFNAALTSDRA------NQFMLASVISACSSLGRLQWG 255
Query: 254 KWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALH 313
K HG V + + ++ ++ SL+DMY KCG+L+ A K+F + S+ SMI A H
Sbjct: 256 KVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKH 315
Query: 314 GQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQI 373
G E A+ +F++MV G + P+ VT +G+L+AC+H GLV +G Y +M +YG+ P
Sbjct: 316 GLGEAAVKLFDEMV--AGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDS 373
Query: 374 EHYGCLVDLLGRAGRFDEAMEVVRGMSM--EPDEVVWGSLFNGCKVYGRTDLAEFAAKKL 431
HY C+VD+LGR GR DEA E+ + + + E ++WG+L + +++GR ++ A+K+L
Sbjct: 374 RHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRL 433
Query: 432 LEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVPGCSWIEIDDQVHQFFSL 491
++ + I L+N Y G W++ ++ +K+ + K CSWIE D V+ F +
Sbjct: 434 IQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKDSVYVFHAG 493
Query: 492 DQSSPKAEELYSVLESL 508
D S ++ E+ L+ L
Sbjct: 494 DLSCDESGEIERFLKDL 510
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 128/297 (43%), Gaps = 43/297 (14%)
Query: 102 HVLKSCHESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNV 161
H L + T +H +K GF LV SY + L + A K+FDEM E NV
Sbjct: 37 HKLSESTNAAFTNLLHTLTLKLGFASDTFTVNHLVISYVK-LKEINTARKLFDEMCEPNV 95
Query: 162 VSFTAMISGYARVGDVDSALKLFDEMPE-RDVPSWNALIAGCTQNGFFSEGIRLFREMVA 220
VS+T++ISGY +G +AL +F +M E R VP
Sbjct: 96 VSWTSVISGYNDMGKPQNALSMFQKMHEDRPVP--------------------------- 128
Query: 221 LAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYG 280
PN T AC + ++GK IH + + + +S+SLVDMYG
Sbjct: 129 -----------PNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYG 177
Query: 281 KCGNLALARKVFE--MNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGV 338
KC ++ AR+VF+ + + + SW SMI +A + + AI +F R +
Sbjct: 178 KCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQF 237
Query: 339 TFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEV 395
+++AC+ G ++ G ++TR G E L+D+ + G A ++
Sbjct: 238 MLASVISACSSLGRLQWGKVAHGLVTRG-GYESNTVVATSLLDMYAKCGSLSCAEKI 293
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 3/160 (1%)
Query: 256 IHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQ 315
+H K F D+F N LV Y K + ARK+F+ + + SW S+I+ + G+
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 316 SEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEH 375
+ A+++F++M E V P+ TF + AC+ G + + G+ I
Sbjct: 111 PQNALSMFQKMHE-DRPVPPNEYTFASVFKACSALAESRIGKNIHARLEIS-GLRRNIVV 168
Query: 376 YGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVV-WGSLFNG 414
LVD+ G+ + A V M VV W S+
Sbjct: 169 SSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITA 208
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/355 (36%), Positives = 204/355 (57%), Gaps = 12/355 (3%)
Query: 161 VVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVA 220
V+ +I+ Y++ +D AL +F +P ++V SW ++IAG N E + R+M
Sbjct: 433 VIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKM 492
Query: 221 LAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYG 280
+PN +TL AL+AC L GK IH +V + +D F+ N+L+DMY
Sbjct: 493 TL--------QPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYV 544
Query: 281 KCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTF 340
+CG + A F + K +TSWN ++ ++ GQ + +F++MV+ VRPD +TF
Sbjct: 545 RCGRMNTAWSQFN-SQKKDVTSWNILLTGYSERGQGSMVVELFDRMVK--SRVRPDEITF 601
Query: 341 VGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMS 400
+ LL C+ +V QG YF M +YG+ P ++HY C+VDLLGRAG EA + ++ M
Sbjct: 602 ISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMP 660
Query: 401 MEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRN 460
+ PD VWG+L N C+++ + DL E +A+ + E+D + GY I+L N+Y + GKW EV
Sbjct: 661 VTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAK 720
Query: 461 VWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESLIGFGNEV 515
V R++K+ GCSW+E+ +VH F S D+ P+ +E+ +VLE +EV
Sbjct: 721 VRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEV 775
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 177/404 (43%), Gaps = 56/404 (13%)
Query: 27 AHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSPNIYL-------YTSSTFS 79
+ +++LG + + VRF L + + + +L S N+ + Y
Sbjct: 122 SSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMC 181
Query: 80 LFRRMLCNSNPTTTRPNNFIYPHVLKSC---HESRSTGAVHAQIVKTGFEQYPIVQTALV 136
L+ RML +P+ + +P VL++C + VH +V+ G+E
Sbjct: 182 LYHRMLWVGG---VKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYEL--------- 229
Query: 137 DSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWN 196
++ A+I+ Y + GDV SA LFD MP RD+ SWN
Sbjct: 230 -----------------------DIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWN 266
Query: 197 ALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWI 256
A+I+G +NG EG+ LF M L+ + P+ +TL +SAC +LG+ I
Sbjct: 267 AMISGYFENGMCHEGLELFFAMRGLSVD-------PDLMTLTSVISACELLGDRRLGRDI 319
Query: 257 HGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQS 316
H YV F VD + NSL MY G+ A K+F K + SW +MI+ + +
Sbjct: 320 HAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLP 379
Query: 317 EGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHY 376
+ AI + M + V+PD +T +L+AC G ++ G ++ + I I
Sbjct: 380 DKAIDTYRMMDQ--DSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVAN 437
Query: 377 GCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGR 420
L+++ + D+A+++ + + + W S+ G ++ R
Sbjct: 438 N-LINMYSKCKCIDKALDIFHNIP-RKNVISWTSIIAGLRLNNR 479
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 122/329 (37%), Gaps = 51/329 (15%)
Query: 9 VLTILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSP 68
VL G L K++ H+ G+ D + + ++ AR +FD +
Sbjct: 202 VLRTCGGIPDLARGKEVHVHVVRYGY-ELDIDVVNALITMYVKCGDVKSARLLFDRMPRR 260
Query: 69 NIYLYTSSTFSLFRRMLCNS--------NPTTTRPNNFIYPHVLKSCH---ESRSTGAVH 117
+I + + F +C+ + P+ V+ +C + R +H
Sbjct: 261 DIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIH 320
Query: 118 AQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDV 177
A ++ TGF V ++ +S T M Y G
Sbjct: 321 AYVITTGFA----VDISVCNS-------------------------LTQM---YLNAGSW 348
Query: 178 DSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTL 237
A KLF M +D+ SW +I+G N + I +R M + KP+ +T+
Sbjct: 349 REAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSV-------KPDEITV 401
Query: 238 VCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPD 297
LSAC L G +H K ++N+L++MY KC + A +F P
Sbjct: 402 AAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPR 461
Query: 298 KGLTSWNSMINCFALHGQSEGAIAVFEQM 326
K + SW S+I L+ + A+ QM
Sbjct: 462 KNVISWTSIIAGLRLNNRCFEALIFLRQM 490
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 9/170 (5%)
Query: 271 ISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECG 330
+ N+ + M+ + GNL A VF ++ L SWN ++ +A G + A+ ++ +M+ G
Sbjct: 131 LGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVG 190
Query: 331 GDVRPDGVTFVGLLNACTHGGL--VEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGR 388
G V+PD TF +L C GG+ + +G + R YG E I+ L+ + + G
Sbjct: 191 G-VKPDVYTFPCVLRTC--GGIPDLARGKEVHVHVVR-YGYELDIDVVNALITMYVKCGD 246
Query: 389 FDEAMEVVRGMSMEPDEVVWGSLFNGCKVYG--RTDLAEFAAKKLLEIDP 436
A + M D + W ++ +G G L F A + L +DP
Sbjct: 247 VKSARLLFDRMP-RRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDP 295
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 93/216 (43%), Gaps = 34/216 (15%)
Query: 116 VHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVG 175
+HA +++TG + AL+D Y R G + A F+ ++++V S+ +++GY+ G
Sbjct: 520 IHAHVLRTGVGLDDFLPNALLDMYVR-CGRMNTAWSQFNS-QKKDVTSWNILLTGYSERG 577
Query: 176 DVDSALKLFDEMPER----DVPSWNALIAGCTQNGFFSEGIRLFREMVALAAE---RGYR 228
++LFD M + D ++ +L+ GC+++ +G+ F +M + Y
Sbjct: 578 QGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYA 637
Query: 229 C----------------------NKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKND-F 265
C P+P L+AC + LG+ ++++ D
Sbjct: 638 CVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKK 697
Query: 266 FVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLT 301
V +I L ++Y CG KV M + GLT
Sbjct: 698 SVGYYI--LLCNLYADCGKWREVAKVRRMMKENGLT 731
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 169/577 (29%), Positives = 275/577 (47%), Gaps = 98/577 (16%)
Query: 13 LGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHL-HSPNIY 71
+G H +K+ A +G+A D YA L AR+IF+ + N+
Sbjct: 446 MGSQFHSIIIKKKLAKNLFVGNALVDMYA---------KCGALEDARQIFERMCDRDNVT 496
Query: 72 LYT-----------SSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSC---HESRSTGAVH 117
T S F LF+RM N + LK+C H VH
Sbjct: 497 WNTIIGSYVQDENESEAFDLFKRM----NLCGIVSDGACLASTLKACTHVHGLYQGKQVH 552
Query: 118 AQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDV 177
VK G ++ ++L+D YS+ G + +A KVF + E +VVS A+I+GY++ ++
Sbjct: 553 CLSVKCGLDRDLHTGSSLIDMYSK-CGIIKDARKVFSSLPEWSVVSMNALIAGYSQ-NNL 610
Query: 178 DSALKLFDEMPERDV-PS---WNALIAGC----------------TQNGFFSEG------ 211
+ A+ LF EM R V PS + ++ C T+ GF SEG
Sbjct: 611 EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGIS 670
Query: 212 --------------------------IRLFREMVALAAERGYRCNK-------------P 232
I L+ M++ ++ G+ P
Sbjct: 671 LLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLP 730
Query: 233 NPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVF 292
+ T V L C S L+ G+ IH ++ +D SN+L+DMY KCG++ + +VF
Sbjct: 731 DQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVF 790
Query: 293 -EMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGG 351
EM + SWNS+IN +A +G +E A+ +F+ M + + PD +TF+G+L AC+H G
Sbjct: 791 DEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQ--SHIMPDEITFLGVLTACSHAG 848
Query: 352 LVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSL 411
V G FEMM +YGIE +++H C+VDLLGR G EA + + +++PD +W SL
Sbjct: 849 KVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSL 908
Query: 412 FNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSY 471
C+++G E +A+KL+E++P N ++L+N+Y G W++ + ++++ +
Sbjct: 909 LGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVK 968
Query: 472 KVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESL 508
KVPG SWI+++ + H F + D+S + ++ LE L
Sbjct: 969 KVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDL 1005
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 112/436 (25%), Positives = 180/436 (41%), Gaps = 86/436 (19%)
Query: 32 LGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLH------SPNIYLYTS---------S 76
LG+A D YA + + YA + FD L + + +Y+S S
Sbjct: 97 LGNAIVDLYA---------KCAQVSYAEKQFDFLEKDVTAWNSMLSMYSSIGKPGKVLRS 147
Query: 77 TFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTGA-----VHAQIVKTGFEQYPIV 131
SLF + PN F + VL +C +R T +H ++K G E+
Sbjct: 148 FVSLFENQIF--------PNKFTFSIVLSTC--ARETNVEFGRQIHCSMIKMGLERNSYC 197
Query: 132 QTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYA------------------- 172
ALVD Y++ + +A +VF+ + + N V +T + SGY
Sbjct: 198 GGALVDMYAK-CDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEG 256
Query: 173 ----------------RVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFR 216
R+G + A LF EM DV +WN +I+G + G + I F
Sbjct: 257 HRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFF 316
Query: 217 EMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLV 276
M + K TL LSA G + L LG +H K + ++ +SLV
Sbjct: 317 NMRKSSV-------KSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLV 369
Query: 277 DMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPD 336
MY KC + A KVFE +K WN+MI +A +G+S + +F M G ++ D
Sbjct: 370 SMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNI--D 427
Query: 337 GVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVV 396
TF LL+ C +E G + ++ ++ + + LVD+ + G ++A ++
Sbjct: 428 DFTFTSLLSTCAASHDLEMGSQFHSIIIKK-KLAKNLFVGNALVDMYAKCGALEDARQIF 486
Query: 397 RGMSMEPDEVVWGSLF 412
M + D V W ++
Sbjct: 487 ERMC-DRDNVTWNTII 501
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 116/236 (49%), Gaps = 10/236 (4%)
Query: 160 NVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMV 219
N+ ++++S Y++ +++A K+F+ + E++ WNA+I G NG + + LF +M
Sbjct: 361 NIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDM- 419
Query: 220 ALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMY 279
GY + T LS C + L++G H + K + F+ N+LVDMY
Sbjct: 420 ---KSSGYNID---DFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMY 473
Query: 280 GKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVT 339
KCG L AR++FE D+ +WN++I + A +F++M CG + DG
Sbjct: 474 AKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCG--IVSDGAC 531
Query: 340 FVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEV 395
L ACTH + QG ++ + G++ + L+D+ + G +A +V
Sbjct: 532 LASTLKACTHVHGLYQG-KQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKV 586
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/433 (23%), Positives = 187/433 (43%), Gaps = 70/433 (16%)
Query: 62 FDHLHSPNIYLYTSSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTGAVHAQIV 121
F L +P+ ++ S FS RR+ + +P R IY HVL S H+ +H +++
Sbjct: 3 FRVLLTPSSAMFDS--FSFVRRL--SYSPDLGRR---IYGHVLPS-HDQ-----IHQRLL 49
Query: 122 KTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSF----------------- 164
+ Q + ++ KVFDEM +R ++
Sbjct: 50 EICLGQCKLFKS----------------RKVFDEMPQRLALALRIGKAVHSKSLILGIDS 93
Query: 165 -----TAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMV 219
A++ YA+ V A K FD + E+DV +WN++++ + G + ++ R V
Sbjct: 94 EGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSIG---KPGKVLRSFV 149
Query: 220 ALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMY 279
+L + + PN T LS C + ++ G+ IH + K +S+ +LVDMY
Sbjct: 150 SLFENQIF----PNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMY 205
Query: 280 GKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVT 339
KC ++ AR+VFE D W + + + G E A+ VFE+M + G RPD +
Sbjct: 206 AKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGH--RPDHLA 263
Query: 340 FVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEV---V 396
FV ++N G ++ F M+ P + + ++ G+ G A+E +
Sbjct: 264 FVTVINTYIRLGKLKDARLLFGEMS-----SPDVVAWNVMISGHGKRGCETVAIEYFFNM 318
Query: 397 RGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGY-GIMLANVYGELGKW 455
R S++ GS+ + + DL + +++ + Y G L ++Y + K
Sbjct: 319 RKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKM 378
Query: 456 DEVRNVWRILKQQ 468
+ V+ L+++
Sbjct: 379 EAAAKVFEALEEK 391
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 141/434 (32%), Positives = 216/434 (49%), Gaps = 51/434 (11%)
Query: 78 FSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRST---GAVHAQIVKTGFEQYPIVQTA 134
FSL RR L + PN+ Y L +C S+ +HA + K G E +++A
Sbjct: 244 FSLMRRGLVH-------PNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESA 296
Query: 135 LVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPS 194
L+D YS+ G ++ A +F+ E D S
Sbjct: 297 LMDMYSK--------------------------------CGSIEDAWTIFESTTEVDEVS 324
Query: 195 WNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGK 254
++ G QNG E I+ F M+ E N V+ V +S ++ L LGK
Sbjct: 325 MTVILVGLAQNGSEEEAIQFFIRMLQAGVEI-----DANVVSAVLGVSFIDNS--LGLGK 377
Query: 255 WIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHG 314
+H V K F ++F++N L++MY KCG+L ++ VF P + SWNSMI FA HG
Sbjct: 378 QLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHG 437
Query: 315 QSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIE 374
A+ ++E+M +V+P VTF+ LL+AC+H GL+++G M +GIEP+ E
Sbjct: 438 HGLAALKLYEEMTTL--EVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTE 495
Query: 375 HYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEI 434
HY C++D+LGRAG EA + + ++PD +W +L C +G T++ E+AA++L +
Sbjct: 496 HYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQT 555
Query: 435 DPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQS 494
P + I++AN+Y GKW E + +K K G S IEI+ + H F D+
Sbjct: 556 APDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKL 615
Query: 495 SPKAEELYSVLESL 508
P+AE +Y VL L
Sbjct: 616 HPQAEAIYDVLSGL 629
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 131/290 (45%), Gaps = 16/290 (5%)
Query: 150 EKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFS 209
E V ++ +V + +++S YA+ G + A+KLFDEMP RDV S N + G +N
Sbjct: 79 EPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETE 138
Query: 210 EGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDS 269
G L + M+ G+ + TL LS C + K IH + + +
Sbjct: 139 SGFVLLKRML---GSGGF-----DHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEI 190
Query: 270 FISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVEC 329
+ N L+ Y KCG R VF+ + + + ++I+ + E + +F M
Sbjct: 191 SVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRR- 249
Query: 330 GGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRF 389
G V P+ VT++ L AC+ + +G ++ + YGIE ++ L+D+ + G
Sbjct: 250 -GLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWK-YGIESELCIESALMDMYSKCGSI 307
Query: 390 DEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLA-EFAAKKL---LEID 435
++A + + E DEV + G G + A +F + L +EID
Sbjct: 308 EDAWTIFES-TTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEID 356
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 242 bits (618), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 132/441 (29%), Positives = 230/441 (52%), Gaps = 22/441 (4%)
Query: 76 STFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTGA----VHAQIVKTGFEQYPIV 131
S SLF+ ML + +P+ + + ++ +C S VHA ++K G+
Sbjct: 187 SCLSLFKEML----ESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEA 242
Query: 132 QTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERD 191
+ +++ Y++ LG +A + + + VS+ ++I ++G+ + AL++F PE++
Sbjct: 243 KNSVLSFYTK-LGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKN 301
Query: 192 VPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQ 251
+ +W +I G +NG + +R F EM+ + + L AC ++L
Sbjct: 302 IVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDH-------FAYGAVLHACSGLALLG 354
Query: 252 LGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFA 311
GK IHG + F +++ N+LV++Y KCG++ A + F +K L SWN+M+ F
Sbjct: 355 HGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFG 414
Query: 312 LHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEP 371
+HG ++ A+ +++ M+ G ++PD VTF+GLL C+H GLVE+GC FE M ++Y I
Sbjct: 415 VHGLADQALKLYDNMIASG--IKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPL 472
Query: 372 QIEHYGCLVDLLGRAGRFDEAMEVVRGMSM----EPDEVVWGSLFNGCKVYGRTDLAEFA 427
+++H C++D+ GR G EA ++ S + W +L C + T+L
Sbjct: 473 EVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREV 532
Query: 428 AKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVPGCSWIEIDDQVHQ 487
+K L +P ++L+N+Y G+W E +V R + ++ K PGCSWIE+ +QV
Sbjct: 533 SKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVST 592
Query: 488 FFSLDQSSPKAEELYSVLESL 508
F D S P+ EEL L L
Sbjct: 593 FVVGDSSHPRLEELSETLNCL 613
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 133/298 (44%), Gaps = 45/298 (15%)
Query: 161 VVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVA 220
+V T+ I+ A+ G + SA ++FD MPE D +WN ++ ++ G E I LF ++
Sbjct: 4 LVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQL-- 61
Query: 221 LAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYG 280
+ KP+ + LS C ++ G+ I V ++ F ++NSL+DMYG
Sbjct: 62 -----RFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYG 116
Query: 281 KCGNLALARKVFE-------------------MN--------------PDKGLTSWNSMI 307
KC + A KVF MN P + +WN MI
Sbjct: 117 KCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMI 176
Query: 308 NCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACT-HGGLVEQGCSYFEMMTRE 366
+ A G+ E +++F++M+E + +PD TF L+NAC+ V G +M +
Sbjct: 177 SGHAHCGKLESCLSLFKEMLE--SEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKN 234
Query: 367 YGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLA 424
G +E ++ + G D+AM + + + +V W S+ + C G T+ A
Sbjct: 235 -GWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEV-LTQVSWNSIIDACMKIGETEKA 290
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 171/401 (42%), Gaps = 69/401 (17%)
Query: 65 LHSPNIYLYTSSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTG---AVHAQIV 121
LH I L+T FS +P+++ + +L +C + + + ++
Sbjct: 50 LHQEAIALFTQLRFS------------DAKPDDYSFTAILSTCASLGNVKFGRKIQSLVI 97
Query: 122 KTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEM--RERNVVSFTAMISGYARVGDVDS 179
++GF V +L+D Y + L +A KVF +M RN V++ +++ Y ++
Sbjct: 98 RSGFCASLPVNNSLIDMYGKCSDTL-SANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEA 156
Query: 180 ALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVC 239
AL +F EMP+R +WN +I+G G + LF+EM+ E + KP+ T
Sbjct: 157 ALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEML----ESEF---KPDCYTFSS 209
Query: 240 ALSAC-GHTSMLQLGKWIHGYVYKNDF--------FVDSFIS------------------ 272
++AC +S + G+ +H + KN + V SF +
Sbjct: 210 LMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVL 269
Query: 273 -----NSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMV 327
NS++D K G A +VF + P+K + +W +MI + +G E A+ F +M+
Sbjct: 270 TQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMM 329
Query: 328 ECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYG----CLVDLL 383
+ G D D + +L+AC+ L+ G M I + Y LV+L
Sbjct: 330 KSGVD--SDHFAYGAVLHACSGLALLGHG-----KMIHGCLIHCGFQGYAYVGNALVNLY 382
Query: 384 GRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLA 424
+ G EA + G D V W ++ V+G D A
Sbjct: 383 AKCGDIKEA-DRAFGDIANKDLVSWNTMLFAFGVHGLADQA 422
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 156/523 (29%), Positives = 257/523 (49%), Gaps = 73/523 (13%)
Query: 9 VLTILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSN------LPYARRIF 62
+LT+L N LKQ+ A + LG H + C +S+ + A+R+F
Sbjct: 209 LLTLLDDPMFCNLLKQVHAKVLKLGLQHE-------ITICNAMISSYADCGSVSDAKRVF 261
Query: 63 DHLH-SPNIYLYTS------------STFSLFRRMLCNSNPTTTRPNNFIYPHVLKSC-- 107
D L S ++ + S S F LF +M + + Y +L +C
Sbjct: 262 DGLGGSKDLISWNSMIAGFSKHELKESAFELFIQM----QRHWVETDIYTYTGLLSACSG 317
Query: 108 HESRSTG-AVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTA 166
E + G ++H ++K G EQ AL+ Y + F
Sbjct: 318 EEHQIFGKSLHGMVIKKGLEQVTSATNALISMY----------------------IQFP- 354
Query: 167 MISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERG 226
G ++ AL LF+ + +D+ SWN++I G Q G + ++ F + +
Sbjct: 355 -------TGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEI--- 404
Query: 227 YRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLA 286
K + L +C + LQLG+ IH K+ F + F+ +SL+ MY KCG +
Sbjct: 405 ----KVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIE 460
Query: 287 LARKVFEMNPDKGLT-SWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLN 345
ARK F+ K T +WN+MI +A HG + ++ +F QM C +V+ D VTF +L
Sbjct: 461 SARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQM--CNQNVKLDHVTFTAILT 518
Query: 346 ACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDE 405
AC+H GL+++G +M Y I+P++EHY VDLLGRAG ++A E++ M + PD
Sbjct: 519 ACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDP 578
Query: 406 VVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRIL 465
+V + C+ G ++A A LLEI+P + + L+++Y +L KW+E +V +++
Sbjct: 579 MVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMM 638
Query: 466 KQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESL 508
K++ KVPG SWIEI +QV F + D+S+P +++Y +++ L
Sbjct: 639 KERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDL 681
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 136/310 (43%), Gaps = 36/310 (11%)
Query: 138 SYSRGLGGLGNAEK----------VFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEM 187
S+SR L G+ + ++ V E NV ++++ YA+ V+ A + F E+
Sbjct: 103 SFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEI 162
Query: 188 PERDVPSWNALIAGCTQ-----NGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALS 242
E + SWNALIAG Q F+ G+ + V + A T L+
Sbjct: 163 SEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAG-----------TFAPLLT 211
Query: 243 ACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFE-MNPDKGLT 301
L K +H V K + I N+++ Y CG+++ A++VF+ + K L
Sbjct: 212 LLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLI 271
Query: 302 SWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFE 361
SWNSMI F+ H E A +F QM V D T+ GLL+AC+ G S
Sbjct: 272 SWNSMIAGFSKHELKESAFELFIQMQRHW--VETDIYTYTGLLSACSGEEHQIFGKSLHG 329
Query: 362 MMTREYGIEPQIEHYGCLVDLLGR--AGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYG 419
M+ ++ G+E L+ + + G ++A+ + + D + W S+ G +
Sbjct: 330 MVIKK-GLEQVTSATNALISMYIQFPTGTMEDALSLFESLK-SKDLISWNSIITG---FA 384
Query: 420 RTDLAEFAAK 429
+ L+E A K
Sbjct: 385 QKGLSEDAVK 394
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 118/275 (42%), Gaps = 20/275 (7%)
Query: 167 MISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAE-R 225
++ Y + G + A LFDEMP+RD SWN +I+G T G + LF M ++
Sbjct: 41 ILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVD 100
Query: 226 GYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNL 285
GY ++ L LG+ +HG V K + + ++ +SLVDMY KC +
Sbjct: 101 GYSFSR--------LLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERV 152
Query: 286 ALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTF---VG 342
A + F+ + SWN++I F + A + M E V D TF +
Sbjct: 153 EDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLM-EMKAAVTMDAGTFAPLLT 211
Query: 343 LLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSME 402
LL+ L++Q + G++ +I ++ G +A V G+
Sbjct: 212 LLDDPMFCNLLKQ----VHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGS 267
Query: 403 PDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPH 437
D + W S+ G + + +L E A + +++ H
Sbjct: 268 KDLISWNSMIAG---FSKHELKESAFELFIQMQRH 299
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 4/158 (2%)
Query: 257 HGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQS 316
H Y K D ++SN ++D Y K G L A +F+ P + SWN+MI+ + G+
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 317 EGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHY 376
E A +F M G DV DG +F LL + G ++ + G E +
Sbjct: 83 EDAWCLFTCMKRSGSDV--DGYSFSRLLKGIASVKRFDLGEQVHGLVIKG-GYECNVYVG 139
Query: 377 GCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNG 414
LVD+ + R ++A E + +S EP+ V W +L G
Sbjct: 140 SSLVDMYAKCERVEDAFEAFKEIS-EPNSVSWNALIAG 176
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 143/409 (34%), Positives = 217/409 (53%), Gaps = 49/409 (11%)
Query: 115 AVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARV 174
++H VKTG +V AL+D Y + L A +F+ M ER++ ++ +++ +
Sbjct: 283 SIHGLAVKTGSGSDIVVSNALIDMYGKS-KWLEEANSIFEAMDERDLFTWNSVLCVHDYC 341
Query: 175 GDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNP 234
GD D L LF+ M GIR P+
Sbjct: 342 GDHDGTLALFERM--------------------LCSGIR------------------PDI 363
Query: 235 VTLVCALSACGHTSMLQLGKWIHGYVYKNDFF----VDSFISNSLVDMYGKCGNLALARK 290
VTL L CG + L+ G+ IHGY+ + + FI NSL+DMY KCG+L AR
Sbjct: 364 VTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARM 423
Query: 291 VFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHG 350
VF+ K SWN MIN + + E A+ +F M C V+PD +TFVGLL AC+H
Sbjct: 424 VFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCM--CRAGVKPDEITFVGLLQACSHS 481
Query: 351 GLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGS 410
G + +G ++ M Y I P +HY C++D+LGRA + +EA E+ + + VVW S
Sbjct: 482 GFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRS 541
Query: 411 LFNGCKVYGRTDLAEFAAKKLLEIDP-HNGGYGIMLANVYGELGKWDEVRNVWRILKQQK 469
+ + C+++G DLA A K+L E++P H GGY ++++NVY E GK++EV +V ++QQ
Sbjct: 542 ILSSCRLHGNKDLALVAGKRLHELEPEHCGGY-VLMSNVYVEAGKYEEVLDVRDAMRQQN 600
Query: 470 SYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESLIG--FGNEVM 516
K PGCSWI + + VH FF+ +Q+ P+ + ++ L +I G+E M
Sbjct: 601 VKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWLSLVISHMHGHEYM 649
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 146/339 (43%), Gaps = 51/339 (15%)
Query: 95 PNNFIYPHVLK--SCHESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKV 152
P+ + +P +LK E VH K GF+ V + LV SYS+ +
Sbjct: 159 PDKYTFPSLLKGSDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMS-------- 210
Query: 153 FDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPS-WNALIAGCTQNGFFSEG 211
V+ A K+FDE+P+RD WNAL+ G +Q F +
Sbjct: 211 ------------------------VEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDA 246
Query: 212 IRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFI 271
+ +F +M E G ++ +++ A + G + G+ IHG K D +
Sbjct: 247 LLVFSKM----REEGVGVSRHTITSVLSAFTVSGD---IDNGRSIHGLAVKTGSGSDIVV 299
Query: 272 SNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGG 331
SN+L+DMYGK L A +FE ++ L +WNS++ G +G +A+FE+M+ C G
Sbjct: 300 SNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERML-CSG 358
Query: 332 DVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEH---YGCLVDLLGRAGR 388
+RPD VT +L C + QG M + + + + L+D+ + G
Sbjct: 359 -IRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGD 417
Query: 389 FDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFA 427
+A V M ++ D W + NG YG E A
Sbjct: 418 LRDARMVFDSMRVK-DSASWNIMING---YGVQSCGELA 452
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 119/249 (47%), Gaps = 14/249 (5%)
Query: 165 TAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAE 224
T++++ YA+ G + A+ +F ERDV +NALI+G NG + + +REM A
Sbjct: 100 TSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGI- 157
Query: 225 RGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGN 284
P+ T L + + K +HG +K F D ++ + LV Y K +
Sbjct: 158 ------LPDKYTFPSLLKGSDAMELSDVKK-VHGLAFKLGFDSDCYVGSGLVTSYSKFMS 210
Query: 285 LALARKVFEMNPDKGLTS-WNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGL 343
+ A+KVF+ PD+ + WN+++N ++ + E A+ VF +M E G V +T V
Sbjct: 211 VEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSV-- 268
Query: 344 LNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEP 403
L+A T G ++ G S + + G I L+D+ G++ +EA + M E
Sbjct: 269 LSAFTVSGDIDNGRSIHGLAVKT-GSGSDIVVSNALIDMYGKSKWLEEANSIFEAMD-ER 326
Query: 404 DEVVWGSLF 412
D W S+
Sbjct: 327 DLFTWNSVL 335
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 89/221 (40%), Gaps = 6/221 (2%)
Query: 214 LFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDS-FIS 272
L+ + E R N T + L C G+ IHG++ + F DS
Sbjct: 40 LYSTVSGQIEENPKRYEHHNVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAG 99
Query: 273 NSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGD 332
SLV+MY KCG + A VF ++ + +N++I+ F ++G A+ + +M G
Sbjct: 100 TSLVNMYAKCGLMRRAVLVFG-GSERDVFGYNALISGFVVNGSPLDAMETYREMRANG-- 156
Query: 333 VRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEA 392
+ PD TF LL L + + + G + LV + ++A
Sbjct: 157 ILPDKYTFPSLLKGSDAMELSD--VKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDA 214
Query: 393 MEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLE 433
+V + D V+W +L NG R + A K+ E
Sbjct: 215 QKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMRE 255
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 117/308 (37%), Gaps = 75/308 (24%)
Query: 55 LPYARRIFDHLHSPNIYLYTS------------STFSLFRRMLCNSNPTTTRPNNFIYPH 102
L A IF+ + +++ + S T +LF RMLC+ RP+
Sbjct: 313 LEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSG----IRPDIVTLTT 368
Query: 103 VLKSC---HESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRER 159
VL +C R +H ++ +G +
Sbjct: 369 VLPTCGRLASLRQGREIHGYMIVSGLLN----------------------------RKSS 400
Query: 160 NVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMV 219
N +++ Y + GD+ A +FD M +D SWN +I G G S G L +M
Sbjct: 401 NEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMING---YGVQSCG-ELALDMF 456
Query: 220 ALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGK-------WIHGYVYKNDFFVDSFIS 272
+ G KP+ +T V L AC H+ L G+ ++ + +D +
Sbjct: 457 SCMCRAGV---KPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYA----- 508
Query: 273 NSLVDMYGKCGNLALARKVFEMNP--DKGLTSWNSMINCFALHGQSEGAIAVFEQMVE-- 328
++DM G+ L A ++ P D + W S+++ LHG + A+ +++ E
Sbjct: 509 -CVIDMLGRADKLEEAYELAISKPICDNPVV-WRSILSSCRLHGNKDLALVAGKRLHELE 566
Query: 329 ---CGGDV 333
CGG V
Sbjct: 567 PEHCGGYV 574
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 142/415 (34%), Positives = 219/415 (52%), Gaps = 34/415 (8%)
Query: 125 FEQYP----IVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSA 180
FE+ P + TA+VD ++ G + A ++FD M ERN++S+ AMI+GYA+ +D A
Sbjct: 194 FERMPRRDVVSWTAMVDGLAKN-GKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEA 252
Query: 181 LKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVA------LAAERGYRCNK--- 231
+LF MPERD SWN +I G +N ++ LF M GY NK
Sbjct: 253 DQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENE 312
Query: 232 ----------------PNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSL 275
PN T V LSAC + L G+ IH + K+ + ++++L
Sbjct: 313 EALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSAL 372
Query: 276 VDMYGKCGNLALARKVFE--MNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDV 333
++MY K G L ARK+F+ + + L SWNSMI +A HG + AI ++ QM + G
Sbjct: 373 LNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHG--F 430
Query: 334 RPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAM 393
+P VT++ LL AC+H GLVE+G +F+ + R+ + + EHY CLVDL GRAGR +
Sbjct: 431 KPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVT 490
Query: 394 EVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELG 453
+ +G++ + C V+ +A+ KK+LE + G ++++N+Y G
Sbjct: 491 NFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANG 550
Query: 454 KWDEVRNVWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESL 508
K +E + +K++ K PGCSW+++ Q H F D+S P+ E L S+L L
Sbjct: 551 KREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILSDL 605
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 154/310 (49%), Gaps = 40/310 (12%)
Query: 130 IVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPE 189
+ TA+V Y R L AE +F EM ERNVVS+ MI GYA+ G +D AL+LFDEMPE
Sbjct: 110 VTWTAMVSGYLRS-KQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPE 168
Query: 190 RDVPSWNALIAGCTQNGFFSEGIRLF-----REMVALA--------------AERGYRC- 229
R++ SWN+++ Q G E + LF R++V+ A R + C
Sbjct: 169 RNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCM 228
Query: 230 NKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDF-----FVDSFISNSLVDMYGKCGN 284
+ N ++ ++ + + + + + DF + FI N +M CG
Sbjct: 229 PERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNR--EMNKACG- 285
Query: 285 LALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLL 344
+F+ P+K + SW +MI + + ++E A+ VF +M+ G V+P+ T+V +L
Sbjct: 286 ------LFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLR-DGSVKPNVGTYVSIL 338
Query: 345 NACTH-GGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVV-RGMSME 402
+AC+ GLVE G +++++ + +I L+++ ++G A ++ G+ +
Sbjct: 339 SACSDLAGLVE-GQQIHQLISKSVHQKNEIV-TSALLNMYSKSGELIAARKMFDNGLVCQ 396
Query: 403 PDEVVWGSLF 412
D + W S+
Sbjct: 397 RDLISWNSMI 406
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 115/248 (46%), Gaps = 26/248 (10%)
Query: 167 MISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERG 226
+I +VG + A KLFD +PERDV +W +I G + G E LF + +
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDS------ 105
Query: 227 YRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLA 286
+ N VT +S + L + + + + + + V S+ N+++D Y + G +
Sbjct: 106 ----RKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERN--VVSW--NTMIDGYAQSGRID 157
Query: 287 LARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNA 346
A ++F+ P++ + SWNSM+ G+ + A+ +FE+M R D V++ +++
Sbjct: 158 KALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERM------PRRDVVSWTAMVDG 211
Query: 347 CTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEV 406
G V++ F+ M E I + ++ + R DEA ++ + M E D
Sbjct: 212 LAKNGKVDEARRLFDCMP-----ERNIISWNAMITGYAQNNRIDEADQLFQVMP-ERDFA 265
Query: 407 VWGSLFNG 414
W ++ G
Sbjct: 266 SWNTMITG 273
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 135/366 (36%), Positives = 206/366 (56%), Gaps = 18/366 (4%)
Query: 144 GGLGNAEKVFDEMRE-RNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGC 202
G L AE +F+ ++ + VS+T+MI GY GDV A LF ++ ++D +W +I+G
Sbjct: 382 GDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGL 441
Query: 203 TQNGFFSEGIRLFREMVALAAERGYRCN-KPNPVTLVCALSACGHTSMLQLGKWIHGYVY 261
QN F+E L +MV RC KP T LS+ G TS L GK IH +
Sbjct: 442 VQNELFAEAASLLSDMV--------RCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIA 493
Query: 262 KND--FFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGA 319
K + D + NSLV MY KCG + A ++F K SWNSMI + HG ++ A
Sbjct: 494 KTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKA 553
Query: 320 IAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCL 379
+ +F++M++ G +P+ VTF+G+L+AC+H GL+ +G F+ M Y I+P I+HY +
Sbjct: 554 LNLFKEMLDSGK--KPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISM 611
Query: 380 VDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTD----LAEFAAKKLLEID 435
+DLLGRAG+ EA E + + PD V+G+L C + R +AE AA +LLE+D
Sbjct: 612 IDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELD 671
Query: 436 PHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSS 495
P N + L NVY LG+ D + + + + + K PGCSW+ ++ + + F S D+S+
Sbjct: 672 PVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGDKSA 731
Query: 496 PKAEEL 501
+A ++
Sbjct: 732 SEAAQM 737
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 154/357 (43%), Gaps = 77/357 (21%)
Query: 145 GLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQ 204
G+ A+ +F +M E+NVV++T+M+ GY R GDV A +LF EMPER++ SW A+I+G
Sbjct: 215 GMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAW 274
Query: 205 NGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACG--HTSMLQLGKWIHGYVYK 262
N + E + LF EM ++ PN TL+ ACG +LG+ +H V
Sbjct: 275 NELYREALMLFLEM-----KKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVIS 329
Query: 263 NDFFV---DSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGA 319
N + D ++ SLV MY G +A A+ + +N L S N +IN + +G E A
Sbjct: 330 NGWETVDHDGRLAKSLVHMYASSGLIASAQSL--LNESFDLQSCNIIINRYLKNGDLERA 387
Query: 320 IAVFEQMVEC---------------GGDVR-----------PDGVTFVGLLNACTHGGLV 353
+FE++ GDV DGVT+ +++ L
Sbjct: 388 ETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELF 447
Query: 354 EQGCSYFEMMTREYGIEP-------------------QIEHYGC---------------- 378
+ S M R G++P Q +H C
Sbjct: 448 AEAASLLSDMVR-CGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQ 506
Query: 379 --LVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLE 433
LV + + G ++A E+ M ++ D V W S+ G +G D A K++L+
Sbjct: 507 NSLVSMYAKCGAIEDAYEIFAKM-VQKDTVSWNSMIMGLSHHGLADKALNLFKEMLD 562
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 106/226 (46%), Gaps = 53/226 (23%)
Query: 127 QYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDE 186
+ ++ TAL D G +A ++FDEM ERNVVS+ +++G R GD++ A ++FD
Sbjct: 140 SWTVMLTALCDD-----GRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDA 194
Query: 187 MPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGH 246
MP RDV SWNA+I G +N E LF +M ++ N VT
Sbjct: 195 MPSRDVVSWNAMIKGYIENDGMEEAKLLFGDM-----------SEKNVVT---------- 233
Query: 247 TSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSM 306
W S+V Y + G++ A ++F P++ + SW +M
Sbjct: 234 --------W-----------------TSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAM 268
Query: 307 INCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGL 352
I+ FA + A+ +F +M + V P+G T + L AC GGL
Sbjct: 269 ISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYAC--GGL 312
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 105/220 (47%), Gaps = 22/220 (10%)
Query: 114 GAVHA-----QIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMI 168
G VHA +I + G + T+L+ Y++ G L A +F+ M ERN+V+ AM+
Sbjct: 57 GLVHARHLLDKIPQRGSINRVVYWTSLLSKYAK-TGYLDEARVLFEVMPERNIVTCNAML 115
Query: 169 SGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYR 228
+GY + ++ A LF EMP ++V SW ++ +G + + LF EM ER
Sbjct: 116 TGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDAVELFDEM----PER--- 167
Query: 229 CNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALA 288
N + TLV L G ++ K + + D V S+ N+++ Y + + A
Sbjct: 168 -NVVSWNTLVTGLIRNGD---MEKAKQVFDAMPSRD--VVSW--NAMIKGYIENDGMEEA 219
Query: 289 RKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVE 328
+ +F +K + +W SM+ + +G A +F +M E
Sbjct: 220 KLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPE 259
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 104/254 (40%), Gaps = 31/254 (12%)
Query: 273 NSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGD 332
SL+ Y K G L AR +FE+ P++ + + N+M+ + + A +F +M +
Sbjct: 81 TSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPK---- 136
Query: 333 VRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEA 392
+ V++ +L A G E F+ M E + + LV L R G ++A
Sbjct: 137 ---NVVSWTVMLTALCDDGRSEDAVELFDEMP-----ERNVVSWNTLVTGLIRNGDMEKA 188
Query: 393 MEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGEL 452
+V M D V W ++ G Y D E A KLL D + VYG
Sbjct: 189 KQVFDAMP-SRDVVSWNAMIKG---YIENDGMEEA--KLLFGDMSEKNVVTWTSMVYGYC 242
Query: 453 GKWDEVRNVWRILKQQK-------SYKVPGCSWIEIDDQVHQFF-----SLDQSSPKAEE 500
++ +VR +R+ + + + G +W E+ + F +D SP E
Sbjct: 243 -RYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGET 301
Query: 501 LYSVLESLIGFGNE 514
L S+ + G G E
Sbjct: 302 LISLAYACGGLGVE 315
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 239 bits (610), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 150/468 (32%), Positives = 236/468 (50%), Gaps = 63/468 (13%)
Query: 58 ARRIFDHLHSPNIYLYT------------SSTFSLFRRMLCNSNPTTTRPNNFIYPHVLK 105
A+ + D + ++ L T + F+ ML +PN + Y VL
Sbjct: 220 AKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEK----VQPNEYTYASVLI 275
Query: 106 SCHESRSTG---AVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVV 162
SC + G +H +VK+GFE QT+L
Sbjct: 276 SCGNLKDIGNGKLIHGLMVKSGFESALASQTSL--------------------------- 308
Query: 163 SFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALA 222
++ Y R VD +L++F + + SW +LI+G QNG + FR+M+ +
Sbjct: 309 -----LTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDS 363
Query: 223 AERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKC 282
KPN TL AL C + +M + G+ IHG V K F D + + L+D+YGKC
Sbjct: 364 I-------KPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKC 416
Query: 283 GNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVG 342
G +AR VF+ + + S N+MI +A +G A+ +FE+M+ G ++P+ VT +
Sbjct: 417 GCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLG--LQPNDVTVLS 474
Query: 343 LLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSME 402
+L AC + LVE+GC F+ R+ I +HY C+VDLLGRAGR +EA E++ +
Sbjct: 475 VLLACNNSRLVEEGCELFDSF-RKDKIMLTNDHYACMVDLLGRAGRLEEA-EMLTTEVIN 532
Query: 403 PDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVW 462
PD V+W +L + CKV+ + ++AE +K+LEI+P + G I+++N+Y GKW+ V +
Sbjct: 533 PDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMK 592
Query: 463 RILKQQKSYKVPGCSWIEIDDQVHQFFSLDQ-SSPKAEELYSVLESLI 509
+K K K P SW+EI+ + H F + D S P +E++ LE LI
Sbjct: 593 SKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELI 640
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 102/433 (23%), Positives = 179/433 (41%), Gaps = 63/433 (14%)
Query: 22 LKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSPNIYLYTS------ 75
+K +QAH+ G + KLV +L ++ YAR++FD + +I + S
Sbjct: 84 IKTIQAHMLKSGFP-AEISGSKLVD-ASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLI 141
Query: 76 ------STFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTGAVHAQIVKTGFEQYP 129
++R M+ N+ P+ + V K+ F
Sbjct: 142 KHRRSKEAVEMYRLMITNN----VLPDEYTLSSVFKA------------------FSDLS 179
Query: 130 IVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPE 189
+ + A S GL V + NV +A++ Y + G A + D + E
Sbjct: 180 LEKEA---QRSHGLA-------VILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEE 229
Query: 190 RDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSM 249
+DV ALI G +Q G +E ++ F+ M+ + PN T L +CG+
Sbjct: 230 KDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQ-------PNEYTYASVLISCGNLKD 282
Query: 250 LQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINC 309
+ GK IHG + K+ F SL+ MY +C + + +VF+ SW S+I+
Sbjct: 283 IGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISG 342
Query: 310 FALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGI 369
+G+ E A+ F +M+ ++P+ T L C++ + E+G ++T+ YG
Sbjct: 343 LVQNGREEMALIEFRKMMR--DSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTK-YGF 399
Query: 370 EPQIEHYGCLVDLLGRAGRFDEAMEVVRGMS----MEPDEVVWGSLFNGCKVYGRTDLAE 425
+ L+DL G+ G D A V +S + + +++ NG +GR L
Sbjct: 400 DRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNG---FGREALDL 456
Query: 426 FAAKKLLEIDPHN 438
F L + P++
Sbjct: 457 FERMINLGLQPND 469
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 239 bits (610), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 125/354 (35%), Positives = 203/354 (57%), Gaps = 12/354 (3%)
Query: 158 ERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFRE 217
+ N+ +++ Y R G + A F EM ++D+ +WN LI+ ++ SE + +F+
Sbjct: 245 QSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDS-SEALLMFQR 303
Query: 218 MVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVD 277
+G+ PN T ++AC + + L G+ +HG +++ F + ++N+L+D
Sbjct: 304 F----ESQGF---VPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALID 356
Query: 278 MYGKCGNLALARKVF-EMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPD 336
MY KCGN+ +++VF E+ + L SW SM+ + HG A+ +F++MV G +RPD
Sbjct: 357 MYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSG--IRPD 414
Query: 337 GVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVV 396
+ F+ +L+AC H GLVE+G YF +M EYGI P + Y C+VDLLGRAG+ EA E+V
Sbjct: 415 RIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELV 474
Query: 397 RGMSMEPDEVVWGSLFNGCKVYGRTDL-AEFAAKKLLEIDPHNGGYGIMLANVYGELGKW 455
M +PDE WG++ CK + L + AA+K++E+ P G +ML+ +Y GKW
Sbjct: 475 ERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKW 534
Query: 456 DEVRNVWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESLI 509
+ V ++++ + K G SWI +++QV F D+ P A +YSVL LI
Sbjct: 535 VDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLGLLI 588
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 156/377 (41%), Gaps = 61/377 (16%)
Query: 58 ARRIFDHLHSPNIYLYTS------------STFSLFRRMLCNSNPTTTRPNNFIYPHVLK 105
AR +FD + ++ +T+ + F M+ T PN F VLK
Sbjct: 64 ARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMV----KQGTSPNEFTLSSVLK 119
Query: 106 SCHESR--STGA-VHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVV 162
SC + + GA VH +VK G E V A+++ Y+
Sbjct: 120 SCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYA--------------------TC 159
Query: 163 SFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALA 222
S T +++A +F ++ ++ +W LI G T G G++++++M+
Sbjct: 160 SVT-----------MEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLEN 208
Query: 223 AERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKC 282
AE P + A+ A + GK IH V K F + + NS++D+Y +C
Sbjct: 209 AE-------VTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRC 261
Query: 283 GNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVG 342
G L+ A+ F DK L +WN++I+ SE A+ +F Q E G V P+ TF
Sbjct: 262 GYLSEAKHYFHEMEDKDLITWNTLISELERSDSSE-ALLMF-QRFESQGFV-PNCYTFTS 318
Query: 343 LLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSME 402
L+ AC + + G + R G +E L+D+ + G ++ V +
Sbjct: 319 LVAACANIAALNCGQQLHGRIFRR-GFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDR 377
Query: 403 PDEVVWGSLFNGCKVYG 419
+ V W S+ G +G
Sbjct: 378 RNLVSWTSMMIGYGSHG 394
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 114/262 (43%), Gaps = 15/262 (5%)
Query: 165 TAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAE 224
T +I Y G V+ A LFDEMP+RDV +W A+I G + + + F EMV
Sbjct: 49 TNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVK---- 104
Query: 225 RGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCG- 283
+ PN TL L +C + +L G +HG V K ++ N++++MY C
Sbjct: 105 ---QGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSV 161
Query: 284 NLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGL 343
+ A +F K +W ++I F G G + +++QM+ +V P +T
Sbjct: 162 TMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIA-- 219
Query: 344 LNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEP 403
+ A V G + + G + + ++DL R G EA M +
Sbjct: 220 VRASASIDSVTTGKQIHASVIKR-GFQSNLPVMNSILDLYCRCGYLSEAKHYFHEME-DK 277
Query: 404 DEVVWGSLFNGCKVYGRTDLAE 425
D + W +L + + R+D +E
Sbjct: 278 DLITWNTLISELE---RSDSSE 296
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 86/166 (51%), Gaps = 10/166 (6%)
Query: 151 KVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPE-RDVPSWNALIAGCTQNGFFS 209
++F +NV A+I YA+ G++ + ++F E+ + R++ SW +++ G +G+ +
Sbjct: 338 RIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGA 397
Query: 210 EGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLG-KWIHGYVYKNDFFVD 268
E + LF +MV+ G R P+ + + LSAC H +++ G K+ + + D
Sbjct: 398 EAVELFDKMVS----SGIR---PDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPD 450
Query: 269 SFISNSLVDMYGKCGNLALARKVFEMNPDK-GLTSWNSMINCFALH 313
I N +VD+ G+ G + A ++ E P K ++W +++ H
Sbjct: 451 RDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAH 496
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 141/308 (45%), Gaps = 45/308 (14%)
Query: 95 PNNFIYPHVLKSCHESRSTGA---VHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEK 151
PN + + ++ +C + +H +I + GF + + AL+D Y++ G + ++++
Sbjct: 311 PNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAK-CGNIPDSQR 369
Query: 152 VFDEMRE-RNVVSFTAMISGYARVGDVDSALKLFDEM------PERDVPSWNALIAGCTQ 204
VF E+ + RN+VS+T+M+ GY G A++LFD+M P+R V + A+++ C
Sbjct: 370 VFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIV--FMAVLSACRH 427
Query: 205 NGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGY--VYK 262
G +G++ F M E Y N P+ C + G GK Y V +
Sbjct: 428 AGLVEKGLKYFNVM-----ESEYGIN-PDRDIYNCVVDLLGRA-----GKIGEAYELVER 476
Query: 263 NDFFVDSFISNSLV------DMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQS 316
F D +++ G LA ARKV E+ P K + ++ + +A G+
Sbjct: 477 MPFKPDESTWGAILGACKAHKHNGLISRLA-ARKVMELKP-KMVGTYVMLSYIYAAEGKW 534
Query: 317 EGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGC----SYFEMM------TRE 366
A +M+ G+ + G++++ + N + ++ C S + ++ TRE
Sbjct: 535 VD-FARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLGLLIEETRE 593
Query: 367 YGIEPQIE 374
G P+++
Sbjct: 594 AGYVPELD 601
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 239 bits (610), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 162/524 (30%), Positives = 257/524 (49%), Gaps = 66/524 (12%)
Query: 11 TILGKSNHLNHLKQLQA-HLTTLGHA-HTDFYAFKLVRFCALTLSNLP----YARRIFDH 64
+++ S N +KQ+++ H + H H + YA + L L NL YA IFD
Sbjct: 13 SLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDS 72
Query: 65 LHSPNIYLYT--------SSTFSLFRR---MLCNSNPTTTRPN----NFIYPHVLKSCHE 109
+ PN ++Y SS L R ++ P+ +F+ LK+C
Sbjct: 73 IEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFF 132
Query: 110 SRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMIS 169
S +H +VK G L DS+ + T ++
Sbjct: 133 SVGK-QIHCWVVKNG--------VFLSDSHVQ-----------------------TGVLR 160
Query: 170 GYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRC 229
Y + A K+FDE+P+ DV W+ L+ G + G SEG+ +FREM+ E
Sbjct: 161 IYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLE----- 215
Query: 230 NKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFF-VDSFISNSLVDMYGKCGNLALA 288
P+ ++ AL+AC L GKWIH +V K + D F+ +LVDMY KCG + A
Sbjct: 216 --PDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETA 273
Query: 289 RKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACT 348
+VF+ + + SW ++I +A +G ++ A+ E++ G ++PD V +G+L AC
Sbjct: 274 VEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDG-IKPDSVVLLGVLAACA 332
Query: 349 HGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVW 408
HGG +E+G S E M Y I P+ EHY C+VDL+ RAGR D+A+ ++ M M+P VW
Sbjct: 333 HGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVW 392
Query: 409 GSLFNGCKVYGRTDLAEFAAKKLLEIDPHN----GGYGIMLANVYGELGKWDEVRNVWRI 464
G+L NGC+ + +L E A K LL+++ N + L+N+Y + + E V +
Sbjct: 393 GALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGM 452
Query: 465 LKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESL 508
++Q+ K PG S +E+D V +F S D S P ++++V+ L
Sbjct: 453 IEQRGVRKTPGWSVLEVDGNVTKFVSGDVSHPNLLQIHTVIHLL 496
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 239 bits (609), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 124/351 (35%), Positives = 194/351 (55%), Gaps = 7/351 (1%)
Query: 158 ERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFRE 217
E V TA++ Y + + A +F +P +DV SW ALI+G T NG I F
Sbjct: 296 ETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSI 355
Query: 218 MVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVD 277
M+ R P+ + +V L +C L+ K H YV K F + FI SLV+
Sbjct: 356 MLLENNTR------PDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVE 409
Query: 278 MYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDG 337
+Y +CG+L A KVF K W S+I + +HG+ A+ F MV+ +V+P+
Sbjct: 410 LYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVK-SSEVKPNE 468
Query: 338 VTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVR 397
VTF+ +L+AC+H GL+ +G F++M +Y + P +EHY LVDLLGR G D A+E+ +
Sbjct: 469 VTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITK 528
Query: 398 GMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDE 457
M P + G+L C+++ ++AE AKKL E++ ++ GY ++++NVYG G+W+
Sbjct: 529 RMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWEN 588
Query: 458 VRNVWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESL 508
V + +KQ+ K S IEI +VH+F + D+ P+ E +Y +L+ L
Sbjct: 589 VEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKEL 639
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 171/403 (42%), Gaps = 57/403 (14%)
Query: 30 TTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSPNIYLYTS------------ST 77
TLG +D Y + + + + A R+FD L P+I ++S
Sbjct: 90 VTLG---SDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQA 146
Query: 78 FSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTGAVHAQIVKTGFEQYPIVQTALVD 137
FRRM+ S+ T R SR VH +++ GF + +L++
Sbjct: 147 VEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLN 206
Query: 138 SYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNA 197
Y++ A +F + E++V+S++ +I+ Y
Sbjct: 207 CYAKS-RAFKEAVNLFKMIAEKDVISWSTVIACY-------------------------- 239
Query: 198 LIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIH 257
QNG +E + +F +M+ E PN T++C L AC L+ G+ H
Sbjct: 240 -----VQNGAAAEALLVFNDMMDDGTE-------PNVATVLCVLQACAAAHDLEQGRKTH 287
Query: 258 GYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSE 317
+ + +S +LVDMY KC + A VF P K + SW ++I+ F L+G +
Sbjct: 288 ELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAH 347
Query: 318 GAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYG 377
+I F M+ + RPD + V +L +C+ G +EQ + + + YG +
Sbjct: 348 RSIEEFSIML-LENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIK-YGFDSNPFIGA 405
Query: 378 CLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGR 420
LV+L R G A +V G++++ D VVW SL G ++G+
Sbjct: 406 SLVELYSRCGSLGNASKVFNGIALK-DTVVWTSLITGYGIHGK 447
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 200/415 (48%), Gaps = 54/415 (13%)
Query: 58 ARRIFDHLHSPNIYLYTSSTFSLFRRM--------LCNSNPTTTRPNNFIYPHVLKSCHE 109
AR++F + ++Y + + SL R + +P+NF P LK+C E
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 110 SRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMIS 169
R + +++ GF + + LG+ ++ +++I
Sbjct: 73 LREVN--YGEMIH-GFVKKDVT--------------LGS-----------DLYVGSSLIY 104
Query: 170 GYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRC 229
Y + G + AL++FDE+ + D+ +W+++++G +NG + + FR MV +A++
Sbjct: 105 MYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMV-MASDV---- 159
Query: 230 NKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALAR 289
P+ VTL+ +SAC S +LG+ +HG+V + F D + NSL++ Y K A
Sbjct: 160 -TPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAV 218
Query: 290 KVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTH 349
+F+M +K + SW+++I C+ +G + A+ VF M++ G + P+ T + +L AC
Sbjct: 219 NLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTE--PNVATVLCVLQACAA 276
Query: 350 GGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWG 409
+EQG E+ R+ G+E +++ LVD+ + +EA V + D V W
Sbjct: 277 AHDLEQGRKTHELAIRK-GLETEVKVSTALVDMYMKCFSPEEAYAVFSRIP-RKDVVSWV 334
Query: 410 SLFNGCKVYGRT--DLAEFAAKKLLEIDPHNGGYGIMLANVYG---ELGKWDEVR 459
+L +G + G + EF+ ++ ++ + I++ V G ELG ++ +
Sbjct: 335 ALISGFTLNGMAHRSIEEFS---IMLLENNTRPDAILMVKVLGSCSELGFLEQAK 386
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 78/147 (53%), Gaps = 12/147 (8%)
Query: 81 FRRMLCNSNPTTTRPNNFIYPHVLKSCHES---RSTGAVHAQIVKTGFEQYPIVQTALVD 137
F ML +N TRP+ + VL SC E H+ ++K GF+ P + +LV+
Sbjct: 353 FSIMLLENN---TRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVE 409
Query: 138 SYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWN- 196
YSR G LGNA KVF+ + ++ V +T++I+GY G AL+ F+ M + N
Sbjct: 410 LYSR-CGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNE 468
Query: 197 ----ALIAGCTQNGFFSEGIRLFREMV 219
++++ C+ G EG+R+F+ MV
Sbjct: 469 VTFLSILSACSHAGLIHEGLRIFKLMV 495
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 238 bits (608), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 123/321 (38%), Positives = 192/321 (59%), Gaps = 8/321 (2%)
Query: 160 NVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMV 219
NV+ T++I YA+ GD+ +A LFD MPER + SWN++I G +QNG E + +F +M+
Sbjct: 250 NVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDML 309
Query: 220 ALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMY 279
L P+ VT + + A QLG+ IH YV K F D+ I +LV+MY
Sbjct: 310 DLGI-------APDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMY 362
Query: 280 GKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVT 339
K G+ A+K FE K +W +I A HG A+++F++M E G+ PDG+T
Sbjct: 363 AKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQE-KGNATPDGIT 421
Query: 340 FVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGM 399
++G+L AC+H GLVE+G YF M +G+EP +EHYGC+VD+L RAGRF+EA +V+ M
Sbjct: 422 YLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTM 481
Query: 400 SMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVR 459
++P+ +WG+L NGC ++ +L + + E + G ++L+N+Y + G+W +V+
Sbjct: 482 PVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVK 541
Query: 460 NVWRILKQQKSYKVPGCSWIE 480
+ +K ++ KV G S +E
Sbjct: 542 LIRESMKSKRVDKVLGHSSVE 562
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/441 (25%), Positives = 194/441 (43%), Gaps = 72/441 (16%)
Query: 9 VLTILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALT--LSNLPYARRIFDHLH 66
+L+ L L L QL + +L+ FC NL YAR +F+ +
Sbjct: 9 ILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESID 68
Query: 67 SPNIYLYTSSTFSLFRRMLCNSNPTTT------------RPNNFIYPHVLKSCHESRST- 113
P++Y++ S + R + NP P+ F +P+VLK+C R
Sbjct: 69 CPSVYIWNS----MIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQ 124
Query: 114 --GAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGY 171
VH +VKTGFE N+ T ++ Y
Sbjct: 125 FGSCVHGFVVKTGFEV--------------------------------NMYVSTCLLHMY 152
Query: 172 ARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNK 231
G+V+ L++F+++P+ +V +W +LI+G N FS+ I FREM + K
Sbjct: 153 MCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGV-------K 205
Query: 232 PNPVTLVCALSACGHTSMLQLGKWIHGYV--------YKNDFFVDSFISNSLVDMYGKCG 283
N +V L ACG + GKW HG++ +++ + ++ SL+DMY KCG
Sbjct: 206 ANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCG 265
Query: 284 NLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGL 343
+L AR +F+ P++ L SWNS+I ++ +G +E A+ +F M++ G + PD VTF+ +
Sbjct: 266 DLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLG--IAPDKVTFLSV 323
Query: 344 LNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEP 403
+ A G + G S +++ G LV++ + G + A + + +
Sbjct: 324 IRASMIQGCSQLGQSIHAYVSKT-GFVKDAAIVCALVNMYAKTGDAESAKKAFEDLE-KK 381
Query: 404 DEVVWGSLFNGCKVYGRTDLA 424
D + W + G +G + A
Sbjct: 382 DTIAWTVVIIGLASHGHGNEA 402
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 61/109 (55%), Gaps = 6/109 (5%)
Query: 115 AVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARV 174
++HA + KTGF + + ALV+ Y++ G +A+K F+++ +++ +++T +I G A
Sbjct: 338 SIHAYVSKTGFVKDAAIVCALVNMYAK-TGDAESAKKAFEDLEKKDTIAWTVVIIGLASH 396
Query: 175 GDVDSALKLFDEMPER-----DVPSWNALIAGCTQNGFFSEGIRLFREM 218
G + AL +F M E+ D ++ ++ C+ G EG R F EM
Sbjct: 397 GHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEM 445
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 134/405 (33%), Positives = 212/405 (52%), Gaps = 10/405 (2%)
Query: 102 HVLKSCHESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNV 161
+VL S + VHA+++K G V + +VD Y + G + AE N+
Sbjct: 268 NVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCK-CGNMKYAESAHLLYGFGNL 326
Query: 162 VSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVAL 221
S ++MI GY+ G + A +LFD + E+++ W A+ G + L R +A
Sbjct: 327 YSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIA- 385
Query: 222 AAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGK 281
N P+ + +V L AC + ++ GK IHG+ + +D + + VDMY K
Sbjct: 386 -----NETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSK 440
Query: 282 CGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFV 341
CGN+ A ++F+ + ++ +N+MI A HG + FE M E G +PD +TF+
Sbjct: 441 CGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTE--GGFKPDEITFM 498
Query: 342 GLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMS- 400
LL+AC H GLV +G YF+ M Y I P+ HY C++DL G+A R D+A+E++ G+
Sbjct: 499 ALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQ 558
Query: 401 MEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRN 460
+E D V+ G+ N C T+L + +KLL I+ NG I +AN Y G+WDE++
Sbjct: 559 VEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQR 618
Query: 461 VWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVL 505
+ ++ ++ GCSW ID Q H F S D S + E +Y++L
Sbjct: 619 IRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAML 663
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 149/337 (44%), Gaps = 43/337 (12%)
Query: 116 VHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDE--MRERNVVSFTAMISGYAR 173
+H +VKTG + ++L+ YS+ G +F+ + + V+ AMI+ Y R
Sbjct: 147 LHGVLVKTGNDGTKFAVSSLIHMYSK-CGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCR 205
Query: 174 VGDVDSALKLFDEMPE-RDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKP 232
GD+D AL +F PE D SWN LIAG QNG+ E +++ M E G + ++
Sbjct: 206 EGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSM----EENGLKWDEH 261
Query: 233 NPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVF 292
+ ++ LS+ L++GK +H V KN + + F+S+ +VD+Y KCGN+ A
Sbjct: 262 SFGAVLNVLSSL---KSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAH 318
Query: 293 EMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDV------------------- 333
+ L S +SMI ++ G+ A +F+ + E V
Sbjct: 319 LLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLE 378
Query: 334 -----------RPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDL 382
PD + V +L AC+ +E G R GI + VD+
Sbjct: 379 LARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRT-GILMDKKLVTAFVDM 437
Query: 383 LGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYG 419
+ G + A E + S E D V++ ++ GC +G
Sbjct: 438 YSKCGNVEYA-ERIFDSSFERDTVMYNAMIAGCAHHG 473
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 129/274 (47%), Gaps = 55/274 (20%)
Query: 117 HAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGD 176
H + +K+G + LV+ YS+ G L A VFDEM ERNV S+ A+I+ Y + +
Sbjct: 11 HIRSIKSGSTLTAVSSNQLVNLYSKS-GLLREARNVFDEMLERNVYSWNAVIAAYVKFNN 69
Query: 177 VDSALKLFD-EMPERDVPSWNALIAGCTQ-NGFFSEGIRLFREMVALAAERGYRCNKPN- 233
V A +LF+ + ERD+ ++N L++G + +G SE I +F EM +R K +
Sbjct: 70 VKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEM--------HRKEKDDI 121
Query: 234 -----PVTLVCALSACGHTSMLQLGKWIHGYVYK-------------------------- 262
VT + LSA + + G+ +HG + K
Sbjct: 122 WIDDFTVTTMVKLSA--KLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEV 179
Query: 263 -NDF------FVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLT-SWNSMINCFALHG 314
N F FVDS N+++ Y + G++ A VF NP+ T SWN++I +A +G
Sbjct: 180 CNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNG 239
Query: 315 QSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACT 348
E A+ + M E G ++ D +F +LN +
Sbjct: 240 YEEEALKMAVSMEENG--LKWDEHSFGAVLNVLS 271
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 84/181 (46%), Gaps = 23/181 (12%)
Query: 58 ARRIFDHLHSPNIYLYTS------------STFSLFRRMLCNSNPTTTRPNNFIYPHVLK 105
A+R+FD L N+ ++T+ S L R + N T P++ + VL
Sbjct: 345 AKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNT---PDSLVMVSVLG 401
Query: 106 SCHES---RSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVV 162
+C +H ++TG + TA VD YS+ G + AE++FD ER+ V
Sbjct: 402 ACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSK-CGNVEYAERIFDSSFERDTV 460
Query: 163 SFTAMISGYARVGDVDSALKLFDEMPE----RDVPSWNALIAGCTQNGFFSEGIRLFREM 218
+ AMI+G A G + + F++M E D ++ AL++ C G EG + F+ M
Sbjct: 461 MYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSM 520
Query: 219 V 219
+
Sbjct: 521 I 521
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 120/349 (34%), Positives = 199/349 (57%), Gaps = 10/349 (2%)
Query: 160 NVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMV 219
NVV T+++ YA+VG ++ A ++F M + SW +LI+G QNG ++ EM
Sbjct: 251 NVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQ 310
Query: 220 ALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMY 279
+L + P+ VTLV L AC L+ G+ +H Y+ K D + +L+DMY
Sbjct: 311 SLGFQ-------PDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVL-DRVTATALMDMY 362
Query: 280 GKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVT 339
KCG L+ +R++FE K L WN+MI+C+ +HG + +++F +M E ++ PD T
Sbjct: 363 SKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTE--SNIEPDHAT 420
Query: 340 FVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGM 399
F LL+A +H GLVEQG +F +M +Y I+P +HY CL+DLL RAGR +EA++++
Sbjct: 421 FASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSE 480
Query: 400 SMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVR 459
++ +W +L +GC + + + AA K+L+++P + G +++N + KW EV
Sbjct: 481 KLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVA 540
Query: 460 NVWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESL 508
V ++++ KVPG S IE++ ++ F D S + + VL +L
Sbjct: 541 KVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLRNL 589
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/437 (23%), Positives = 187/437 (42%), Gaps = 53/437 (12%)
Query: 21 HLKQLQAHLTTLGHA-HTDFYAFKLVRFCALTLSNLPYARRIFDHLHSPNIYLYTSSTFS 79
H+ Q+ A + + G+ + + L+ C + + YAR++FD L + +Y S
Sbjct: 32 HITQIHAFVISTGNLLNGSSISRDLIASCG-RIGEISYARKVFDELPQRGVSVYNSMIVV 90
Query: 80 LFR--------RMLCNSNPTTTRPNNFIYPHVLKSCHESRSTGAVHAQIVKTGFEQYPIV 131
R R+ +P++ + +K+C +G V E+ V
Sbjct: 91 YSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKAC----LSGLV--------LEKGEAV 138
Query: 132 QTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERD 191
VD G VF +++++ Y + G +D A LF +M +RD
Sbjct: 139 WCKAVD--------FGYKNDVF---------VCSSVLNLYMKCGKMDEAEVLFGKMAKRD 181
Query: 192 VPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQ 251
V W ++ G Q G + + +REM G+ ++ V ++ L A G +
Sbjct: 182 VICWTTMVTGFAQAGKSLKAVEFYREM----QNEGFGRDR---VVMLGLLQASGDLGDTK 234
Query: 252 LGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFA 311
+G+ +HGY+Y+ ++ + SLVDMY K G + +A +VF K SW S+I+ FA
Sbjct: 235 MGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFA 294
Query: 312 LHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEP 371
+G + A +M G +PD VT VG+L AC+ G ++ G + + + ++
Sbjct: 295 QNGLANKAFEAVVEMQSLG--FQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDR 352
Query: 372 QIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKL 431
L+D+ + G + E+ + D V W ++ + ++G K+
Sbjct: 353 VTA--TALMDMYSKCGALSSSREIFEHVG-RKDLVCWNTMISCYGIHGNGQEVVSLFLKM 409
Query: 432 LE--IDPHNGGYGIMLA 446
E I+P + + +L+
Sbjct: 410 TESNIEPDHATFASLLS 426
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 142/401 (35%), Positives = 220/401 (54%), Gaps = 24/401 (5%)
Query: 119 QIVKTGFEQYPIVQTALVDSYSRGLGGLGNAE--KVFDEMRERNVVSFTAM----ISGYA 172
++ K GF+ I TAL+ + S L N E K R + F M I Y+
Sbjct: 409 EMQKQGFKIDYITVTALLSAAS----NLRNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYS 464
Query: 173 RVGDVDSALKLFDE--MPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCN 230
+ G + + KLF+ ERD +WN++I+G TQNG + +FR+M+ E+ R
Sbjct: 465 KSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKML----EQNIR-- 518
Query: 231 KPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARK 290
PN VT+ L AC + LGK +HG+ + + F++++LVDMY K G + A
Sbjct: 519 -PNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAED 577
Query: 291 VFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHG 350
+F ++ ++ +MI + HG E AI++F M E G ++PD +TFV +L+AC++
Sbjct: 578 MFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESG--IKPDAITFVAVLSACSYS 635
Query: 351 GLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEV-VWG 409
GL+++G FE M Y I+P EHY C+ D+LGR GR +EA E V+G+ E + +WG
Sbjct: 636 GLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWG 695
Query: 410 SLFNGCKVYGRTDLAEFAAKKLLEIDPHN--GGYGIMLANVYGELGKWDEVRNVWRILKQ 467
SL CK++G +LAE +++L + D GY ++L+N+Y E KW V V R +++
Sbjct: 696 SLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMRE 755
Query: 468 QKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESL 508
+ K G S IEI V+ F S DQ P + E+Y V++ L
Sbjct: 756 KGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGL 796
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 145/285 (50%), Gaps = 17/285 (5%)
Query: 152 VFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEG 211
V RE +V +++ Y+R G V + +F M ERDV SWN +I+ QNG EG
Sbjct: 344 VSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEG 403
Query: 212 IRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFI 271
+ L EM ++G+ K + +T+ LSA + ++GK H ++ + + +
Sbjct: 404 LMLVYEM----QKQGF---KIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEG-M 455
Query: 272 SNSLVDMYGKCGNLALARKVFEMN--PDKGLTSWNSMINCFALHGQSEGAIAVFEQMVEC 329
++ L+DMY K G + +++K+FE + ++ +WNSMI+ + +G +E VF +M+E
Sbjct: 456 NSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLE- 514
Query: 330 GGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRF 389
++RP+ VT +L AC+ G V+ G R+Y ++ + LVD+ +AG
Sbjct: 515 -QNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQY-LDQNVFVASALVDMYSKAGAI 572
Query: 390 DEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEI 434
A E + + E + V + ++ G YG+ + E A L +
Sbjct: 573 KYA-EDMFSQTKERNSVTYTTMILG---YGQHGMGERAISLFLSM 613
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 136/288 (47%), Gaps = 35/288 (12%)
Query: 159 RNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREM 218
+++ ++ IS YA +GD++S+ ++FD ER++ WN +I QN E I LF E
Sbjct: 249 KDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEA 308
Query: 219 VALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDM 278
+ G + + VT + A SA ++LG+ HG+V KN + I NSL+ M
Sbjct: 309 I------GSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVM 362
Query: 279 YGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHG-QSEGAIAVFEQMVECGGDVRPDG 337
Y +CG++ + VF ++ + SWN+MI+ F +G EG + V+E + + D
Sbjct: 363 YSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ---GFKIDY 419
Query: 338 VTFVGLLNAC-----------THGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRA 386
+T LL+A TH L+ QG FE M L+D+ ++
Sbjct: 420 ITVTALLSAASNLRNKEIGKQTHAFLIRQGIQ-FEGMN------------SYLIDMYSKS 466
Query: 387 GRFDEAMEVVRGMS-MEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLE 433
G + ++ G E D+ W S+ +G G T+ +K+LE
Sbjct: 467 GLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLE 514
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 161/382 (42%), Gaps = 63/382 (16%)
Query: 54 NLPYARRIFDHLHSPNIYLYTSSTFSLFRRMLCNSNP----------TTTRP----NNFI 99
N AR++FD + P L+ + +CN+ P T P + +
Sbjct: 54 NPQLARQLFDAIPKPTTVLWNTIIIGF----ICNNLPHEALLFYSRMKKTAPFTNCDAYT 109
Query: 100 YPHVLKSCHESRSTGA---VHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEM 156
Y LK+C E+++ A VH +++ +V +L++ Y L NA F+
Sbjct: 110 YSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCL----NAPDCFE-- 163
Query: 157 RERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFR 216
D K+FD M ++V +WN LI+ + G +E R F
Sbjct: 164 --------------------YDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFG 203
Query: 217 EMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYK--NDFFVDSFISNS 274
M+ + KP+PV+ V A + ++ +G + K +++ D F+ +S
Sbjct: 204 IMMRMEV-------KPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSS 256
Query: 275 LVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGG--D 332
+ MY + G++ +R+VF+ ++ + WN+MI + Q++ + E +E G +
Sbjct: 257 AISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYV---QNDCLVESIELFLEAIGSKE 313
Query: 333 VRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEA 392
+ D VT++ +A + VE G + +++ + P I L+ + R G ++
Sbjct: 314 IVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELP-IVIVNSLMVMYSRCGSVHKS 372
Query: 393 MEVVRGMSMEPDEVVWGSLFNG 414
V M E D V W ++ +
Sbjct: 373 FGVFLSMR-ERDVVSWNTMISA 393
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 81/153 (52%), Gaps = 12/153 (7%)
Query: 73 YTSSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTG---AVHAQIVKTGFEQYP 129
+T TF +FR+ML RPN +L +C + S +H ++ +Q
Sbjct: 501 HTEKTFLVFRKML----EQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNV 556
Query: 130 IVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPE 189
V +ALVD YS+ G + AE +F + +ERN V++T MI GY + G + A+ LF M E
Sbjct: 557 FVASALVDMYSKA-GAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQE 615
Query: 190 R----DVPSWNALIAGCTQNGFFSEGIRLFREM 218
D ++ A+++ C+ +G EG+++F EM
Sbjct: 616 SGIKPDAITFVAVLSACSYSGLIDEGLKIFEEM 648
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 105/246 (42%), Gaps = 21/246 (8%)
Query: 163 SFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALA 222
S + +S + G+ A +LFD +P+ WN +I G N E + + M A
Sbjct: 41 SIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTA 100
Query: 223 AERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKC 282
+ T L AC T L+ GK +H ++ + + NSL++MY C
Sbjct: 101 P-----FTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSC 155
Query: 283 GNLA------LARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPD 336
N + RKVF+ K + +WN++I+ + G++ A F M+ +V+P
Sbjct: 156 LNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRM--EVKPS 213
Query: 337 GVTFVGLLNACTHGGLVEQGCSYFEMMTR---EY-----GIEPQIEHYGCLVDLLGRAGR 388
V+FV + A + +++ ++ +M + EY + I Y L D+
Sbjct: 214 PVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRV 273
Query: 389 FDEAME 394
FD +E
Sbjct: 274 FDSCVE 279
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 124/349 (35%), Positives = 198/349 (56%), Gaps = 9/349 (2%)
Query: 160 NVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMV 219
NV +++I Y++ G + ALK+F M ++ +WN++I+ ++N I LF M+
Sbjct: 510 NVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLML 569
Query: 220 ALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMY 279
+ P+ V++ L A T+ L GK +HGY + D+ + N+L+DMY
Sbjct: 570 SQGIF-------PDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMY 622
Query: 280 GKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVT 339
KCG A +F+ K L +WN MI + HG A+++F++M + G PD VT
Sbjct: 623 VKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGES--PDDVT 680
Query: 340 FVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGM 399
F+ L++AC H G VE+G + FE M ++YGIEP +EHY +VDLLGRAG +EA ++ M
Sbjct: 681 FLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAM 740
Query: 400 SMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVR 459
+E D +W L + + + +L +A+KLL ++P G + L N+Y E G +E
Sbjct: 741 PIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAA 800
Query: 460 NVWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESL 508
+ ++K++ +K PGCSWIE+ D+ + FFS SSP E+++VL L
Sbjct: 801 KLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRL 849
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 144/306 (47%), Gaps = 12/306 (3%)
Query: 165 TAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAE 224
+A+++ Y++ G A +F M E+D+ +W +LI+G +NG F E +++F +M +
Sbjct: 412 SALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDM-----K 466
Query: 225 RGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGN 284
KP+ + +AC L+ G +HG + K ++ F+ +SL+D+Y KCG
Sbjct: 467 DDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGL 526
Query: 285 LALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLL 344
+A KVF + + +WNSMI+C++ + E +I +F M+ G + PD V+ +L
Sbjct: 527 PEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQG--IFPDSVSITSVL 584
Query: 345 NACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPD 404
A + + +G S T GI L+D+ + G A + + M
Sbjct: 585 VAISSTASLLKGKS-LHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQ-HKS 642
Query: 405 EVVWGSLFNGCKVYGR--TDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVW 462
+ W + G +G T L+ F K P + + + L + G +E +N++
Sbjct: 643 LITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTF-LSLISACNHSGFVEEGKNIF 701
Query: 463 RILKQQ 468
+KQ
Sbjct: 702 EFMKQD 707
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 145/352 (41%), Gaps = 49/352 (13%)
Query: 79 SLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTG---AVHAQIVKTGFEQYPIVQTAL 135
SL ML +N +F L +C +S ++G +H +VK G P V T+L
Sbjct: 256 SLDLYMLAKNNSVKLVSTSF--TGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSL 313
Query: 136 VDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSW 195
+S Y++ G V A +F + ++ + W
Sbjct: 314 --------------------------------LSMYSKCGMVGEAETVFSCVVDKRLEIW 341
Query: 196 NALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKW 255
NA++A +N + + LF M + P+ TL +S C + GK
Sbjct: 342 NAMVAAYAENDYGYSALDLFGFMRQ-------KSVLPDSFTLSNVISCCSVLGLYNYGKS 394
Query: 256 IHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQ 315
+H ++K S I ++L+ +Y KCG A VF+ +K + +W S+I+ +G+
Sbjct: 395 VHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGK 454
Query: 316 SEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEH 375
+ A+ VF M + ++PD + NAC + G M + G+ +
Sbjct: 455 FKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKT-GLVLNVFV 513
Query: 376 YGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFA 427
L+DL + G + A++V MS E + V W S+ + Y R +L E +
Sbjct: 514 GSSLIDLYSKCGLPEMALKVFTSMSTE-NMVAWNSMIS---CYSRNNLPELS 561
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 113/432 (26%), Positives = 172/432 (39%), Gaps = 86/432 (19%)
Query: 17 NHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDH-------LHSPN 69
+L++ K + + LG + F A LV + L YA ++FD + + +
Sbjct: 74 TNLSYGKTIHGSVVVLGWRYDPFIATSLVNM-YVKCGFLDYAVQVFDGWSQSQSGVSARD 132
Query: 70 IYLYTSST------------FSLFRRMLCNSNPTTTRPNNFIYPHVLKS-CHES---RST 113
+ ++ S FRRML RP+ F V+ C E R
Sbjct: 133 VTVWNSMIDGYFKFRRFKEGVGCFRRMLVFG----VRPDAFSLSIVVSVMCKEGNFRREE 188
Query: 114 GA-VHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRER-NVVSFTAMISGY 171
G +H +++ + ++TAL+D Y + G +A +VF E+ ++ NVV + MI G+
Sbjct: 189 GKQIHGFMLRNSLDTDSFLKTALIDMYFK-FGLSIDAWRVFVEIEDKSNVVLWNVMIVGF 247
Query: 172 ARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNK 231
G +S+L L Y K
Sbjct: 248 GGSGICESSLDL-------------------------------------------YMLAK 264
Query: 232 PNPVTLVC-----ALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLA 286
N V LV AL AC + G+ IH V K D ++ SL+ MY KCG +
Sbjct: 265 NNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVG 324
Query: 287 LARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNA 346
A VF DK L WN+M+ +A + A+ +F M + V PD T +++
Sbjct: 325 EAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQ--KSVLPDSFTLSNVISC 382
Query: 347 CTHGGLVEQGCS-YFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDE 405
C+ GL G S + E+ R IE L+ L + G +A V + M E D
Sbjct: 383 CSVLGLYNYGKSVHAELFKRPIQSTSTIE--SALLTLYSKCGCDPDAYLVFKSME-EKDM 439
Query: 406 VVWGSLFNG-CK 416
V WGSL +G CK
Sbjct: 440 VAWGSLISGLCK 451
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 84/188 (44%), Gaps = 12/188 (6%)
Query: 236 TLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMN 295
T L AC + L GK IHG V + D FI+ SLV+MY KCG L A +VF+
Sbjct: 62 TFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGW 121
Query: 296 PD-------KGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNA-C 347
+ +T WNSMI+ + + + + F +M+ G VRPD + +++ C
Sbjct: 122 SQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFG--VRPDAFSLSIVVSVMC 179
Query: 348 THGGL-VEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEV 406
G E+G M R ++ L+D+ + G +A V + + + V
Sbjct: 180 KEGNFRREEGKQIHGFMLRN-SLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVV 238
Query: 407 VWGSLFNG 414
+W + G
Sbjct: 239 LWNVMIVG 246
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 128/349 (36%), Positives = 197/349 (56%), Gaps = 11/349 (3%)
Query: 166 AMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAER 225
++I Y++ G VDSA +F+++ R V +WN+++ G +QNG E I LF M E
Sbjct: 444 SLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEM 503
Query: 226 GYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNL 285
N VT + + AC L+ GKW+H + + D F +L+DMY KCG+L
Sbjct: 504 -------NEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL-KDLFTDTALIDMYAKCGDL 555
Query: 286 ALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLN 345
A VF + + SW+SMIN + +HG+ AI+ F QMVE G +P+ V F+ +L+
Sbjct: 556 NAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESG--TKPNEVVFMNVLS 613
Query: 346 ACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDE 405
AC H G VE+G YF +M + +G+ P EH+ C +DLL R+G EA ++ M D
Sbjct: 614 ACGHSGSVEEGKYYFNLM-KSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADA 672
Query: 406 VVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRIL 465
VWGSL NGC+++ + D+ + L +I + GY +L+N+Y E G+W+E R + +
Sbjct: 673 SVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAM 732
Query: 466 KQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESLIGFGNE 514
K KVPG S IEID +V +F + +++ + +E+Y L +L NE
Sbjct: 733 KSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNLQNLTNE 781
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 195/424 (45%), Gaps = 66/424 (15%)
Query: 8 QVLTILGKSNHLNHLKQLQAHLTTLGHAHTD-FYAFKLVRFCALTLSNLPYARRIFDHLH 66
Q + + + L + QL AHL G D KL+ A + + +R +F+
Sbjct: 3 QYMPLFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAF-MGSPDSSRLVFEAFP 61
Query: 67 SPNIYLY------------TSSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRS-- 112
P+ ++Y + L+ R++ TT+ + F++P VL++C SR
Sbjct: 62 YPDSFMYGVLIKCNVWCHLLDAAIDLYHRLV----SETTQISKFVFPSVLRACAGSREHL 117
Query: 113 --TGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISG 170
G VH +I+K G + +++T+L +
Sbjct: 118 SVGGKVHGRIIKGGVDDDAVIETSL--------------------------------LCM 145
Query: 171 YARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCN 230
Y + G++ A K+FD MP RD+ +W+ L++ C +NG + +R+F+ MV E
Sbjct: 146 YGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVE------ 199
Query: 231 KPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARK 290
P+ VT++ + C L++ + +HG + + F +D + NSL+ MY KCG+L + +
Sbjct: 200 -PDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSER 258
Query: 291 VFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHG 350
+FE K SW +MI+ + SE A+ F +M++ G + P+ VT +L++C
Sbjct: 259 IFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSG--IEPNLVTLYSVLSSCGLI 316
Query: 351 GLVEQGCSYFEMMTREYGIEPQIEHYG-CLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWG 409
GL+ +G S R ++P E LV+L G+ + V+R +S + + V W
Sbjct: 317 GLIREGKSVHGFAVRR-ELDPNYESLSLALVELYAECGKLSDCETVLRVVS-DRNIVAWN 374
Query: 410 SLFN 413
SL +
Sbjct: 375 SLIS 378
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 145/288 (50%), Gaps = 20/288 (6%)
Query: 118 AQIVKTGFEQYPIVQTALVDSYSRGLGGL---GNAEKVFDEMRER--NVVSFT-AMISGY 171
++++K+G E + +++ S GL GL G + F RE N S + A++ Y
Sbjct: 292 SEMIKSGIEPNLVTLYSVLSSC--GLIGLIREGKSVHGFAVRRELDPNYESLSLALVELY 349
Query: 172 ARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNK 231
A G + + + +R++ +WN+LI+ G + + LFR+MV K
Sbjct: 350 AECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRI-------K 402
Query: 232 PNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKV 291
P+ TL ++SAC + ++ LGK IHG+V + D D F+ NSL+DMY K G++ A V
Sbjct: 403 PDAFTLASSISACENAGLVPLGKQIHGHVIRTDV-SDEFVQNSLIDMYSKSGSVDSASTV 461
Query: 292 FEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGG 351
F + + +WNSM+ F+ +G S AI++F+ M + + VTF+ ++ AC+ G
Sbjct: 462 FNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYH--SYLEMNEVTFLAVIQACSSIG 519
Query: 352 LVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGM 399
+E+G + G++ L+D+ + G + A V R M
Sbjct: 520 SLEKG-KWVHHKLIISGLKDLFTDTA-LIDMYAKCGDLNAAETVFRAM 565
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 161/525 (30%), Positives = 259/525 (49%), Gaps = 68/525 (12%)
Query: 11 TILGKSNHLNHLKQLQA-HLTTLGHA-HTDFYAFKLVRFCALTLSNLP----YARRIFDH 64
+++ S N +KQ+++ H + H H + YA + L L NL YA IFD
Sbjct: 13 SLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDS 72
Query: 65 LHSPNIYLYT--------SSTFSLFRR---MLCNSNPTTTRPN----NFIYPHVLKSCHE 109
+ PN ++Y SS L R ++ P+ +F+ LK+C
Sbjct: 73 IEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFF 132
Query: 110 SRSTGAVHAQIVKTG-FEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMI 168
S +H +VK G F VQT ++ Y + +FD
Sbjct: 133 SVGK-QIHCWVVKNGVFLSDGHVQTGVLRIYVED-------KLLFD-------------- 170
Query: 169 SGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYR 228
A K+FDE+P+ DV W+ L+ G + G SEG+ +F+EM+ E
Sbjct: 171 -----------ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIE---- 215
Query: 229 CNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFF-VDSFISNSLVDMYGKCGNLAL 287
P+ ++ AL+AC L GKWIH +V K + D F+ +LVDMY KCG +
Sbjct: 216 ---PDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIET 272
Query: 288 ARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNAC 347
A +VFE + + SW ++I +A +G ++ A ++ +E ++PD V +G+L AC
Sbjct: 273 AVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDR-IEREDGIKPDSVVLLGVLAAC 331
Query: 348 THGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVV 407
HGG +E+G + E M YGI P+ EHY C+VDL+ RAGR D+A++++ M M+P V
Sbjct: 332 AHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASV 391
Query: 408 WGSLFNGCKVYGRTDLAEFAAKKLLEIDPHN----GGYGIMLANVYGELGKWDEVRNVWR 463
WG+L NGC+ + +L E A + LL+++ N + L+N+Y + + E V
Sbjct: 392 WGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRG 451
Query: 464 ILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESL 508
+++Q+ K PG S +E+D V +F S D S P ++++++ L
Sbjct: 452 MIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPNLLQIHTLIHLL 496
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 235 bits (599), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 147/501 (29%), Positives = 242/501 (48%), Gaps = 60/501 (11%)
Query: 23 KQLQAHLTTLGHAHTDFYAFKLV----RFCALTLSNLPYARRIFDHLHSPNIYL--YTSS 76
KQ+ H + + F + L+ R + + + + R FD L + N + YT S
Sbjct: 437 KQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNFD-LVAWNAMMAGYTQS 495
Query: 77 -----TFSLFRRMLCNSNPTTTRPNNFIYPHVLKSC---HESRSTGAVHAQIVKTGFEQY 128
T LF M + R ++F V K+C VHA +K+G++
Sbjct: 496 HDGHKTLKLFALM----HKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLD 551
Query: 129 PIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMP 188
V + ++D Y + GD+ +A FD +P
Sbjct: 552 LWVSSGILDMY--------------------------------VKCGDMSAAQFAFDSIP 579
Query: 189 ERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTS 248
D +W +I+GC +NG +F +M + P+ T+ A +
Sbjct: 580 VPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGV-------LPDEFTIATLAKASSCLT 632
Query: 249 MLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMIN 308
L+ G+ IH K + D F+ SLVDMY KCG++ A +F+ +T+WN+M+
Sbjct: 633 ALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLV 692
Query: 309 CFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYG 368
A HG+ + + +F+QM G ++PD VTF+G+L+AC+H GLV + + M +YG
Sbjct: 693 GLAQHGEGKETLQLFKQMKSLG--IKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYG 750
Query: 369 IEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAA 428
I+P+IEHY CL D LGRAG +A ++ MSME ++ +L C+V G T+ + A
Sbjct: 751 IKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVA 810
Query: 429 KKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVPGCSWIEIDDQVHQF 488
KLLE++P + ++L+N+Y KWDE++ ++K K K PG SWIE+ +++H F
Sbjct: 811 TKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIF 870
Query: 489 FSLDQSSPKAEELYSVLESLI 509
D+S+ + E +Y ++ +I
Sbjct: 871 VVDDRSNRQTELIYRKVKDMI 891
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 153/325 (47%), Gaps = 20/325 (6%)
Query: 119 QIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVS----FTAMISGYARV 174
Q+++ G + T+++ + S GL +++V + N VS TA+I Y+R
Sbjct: 406 QLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRN 465
Query: 175 GDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNP 234
+ A LF E D+ +WNA++AG TQ+ + ++LF AL ++G R +
Sbjct: 466 RCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLF----ALMHKQGER---SDD 517
Query: 235 VTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEM 294
TL CG + GK +H Y K+ + +D ++S+ ++DMY KCG+++ A+ F+
Sbjct: 518 FTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDS 577
Query: 295 NPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVE 354
P +W +MI+ +G+ E A VF QM G V PD T L A + +E
Sbjct: 578 IPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMG--VLPDEFTIATLAKASSCLTALE 635
Query: 355 QGCS-YFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFN 413
QG + + +P + LVD+ + G D+A + + + M + W ++
Sbjct: 636 QGRQIHANALKLNCTNDPFVG--TSLVDMYAKCGSIDDAYCLFKRIEM-MNITAWNAMLV 692
Query: 414 GCKVY--GRTDLAEFAAKKLLEIDP 436
G + G+ L F K L I P
Sbjct: 693 GLAQHGEGKETLQLFKQMKSLGIKP 717
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 124/275 (45%), Gaps = 17/275 (6%)
Query: 166 AMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAER 225
++I+ Y ++ A +FD M ERD+ SWN++IAG QNG E + LF +++
Sbjct: 355 SLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLL------ 408
Query: 226 GYRCN-KPNPVTLVCALSACGHTSM-LQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCG 283
RC KP+ T+ L A L L K +H + K + DSF+S +L+D Y +
Sbjct: 409 --RCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNR 466
Query: 284 NLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGL 343
+ A +FE + + L +WN+M+ + + +F M + G R D T +
Sbjct: 467 CMKEAEILFERH-NFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGE--RSDDFTLATV 523
Query: 344 LNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEP 403
C + QG + G + + ++D+ + G A + + P
Sbjct: 524 FKTCGFLFAINQGKQVHAYAIKS-GYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV-P 581
Query: 404 DEVVWGSLFNGCKVYGRTDLA--EFAAKKLLEIDP 436
D+V W ++ +GC G + A F+ +L+ + P
Sbjct: 582 DDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLP 616
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 147/353 (41%), Gaps = 72/353 (20%)
Query: 54 NLPYARRIFDHLHSPNIYLYTS-----------------STFSLFRRMLCNSNPTTTRPN 96
+L YARR+FD + ++ + S F LFR +L T+R
Sbjct: 89 SLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFR-ILRQDVVYTSR-- 145
Query: 97 NFIYPHVLKSCHESR---STGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVF 153
+LK C S ++ + H K G + V ALV+ Y + G + + +F
Sbjct: 146 -MTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLK-FGKVKEGKVLF 203
Query: 154 DEMRERNVVSFTAMISGYARVG------DVDSA------------LKLF-----DEMPER 190
+EM R+VV + M+ Y +G D+ SA L+L D+
Sbjct: 204 EEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAG 263
Query: 191 DVPSW---------------NALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPV 235
V S+ N ++ +G +S ++ F +MV E C++ V
Sbjct: 264 QVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMV----ESDVECDQ---V 316
Query: 236 TLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMN 295
T + L+ L LG+ +H K + +SNSL++MY K AR VF+
Sbjct: 317 TFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNM 376
Query: 296 PDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACT 348
++ L SWNS+I A +G A+ +F Q++ CG ++PD T +L A +
Sbjct: 377 SERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCG--LKPDQYTMTSVLKAAS 427
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 87/173 (50%), Gaps = 14/173 (8%)
Query: 153 FDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNG-----F 207
F+E ER +++ +IS Y++ G + A ++FD+MP+RD+ SWN+++A Q+
Sbjct: 68 FEENPERFLIN--NLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVEN 125
Query: 208 FSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFV 267
+ LFR L + Y + +TL L C H+ + + HGY K
Sbjct: 126 IQQAFLLFR---ILRQDVVY----TSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDG 178
Query: 268 DSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAI 320
D F++ +LV++Y K G + + +FE P + + WN M+ + G E AI
Sbjct: 179 DEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAI 231
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 79/173 (45%), Gaps = 9/173 (5%)
Query: 247 TSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSM 306
+S L LGK H + + + F+ N+L+ MY KCG+L AR+VF+ PD+ L SWNS+
Sbjct: 52 SSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSI 111
Query: 307 INCFALHGQSEGAIAVFEQMVECGGDVRPDGV-----TFVGLLNACTHGGLVEQGCSYFE 361
+ +A SE + +Q +R D V T +L C H G V S F
Sbjct: 112 LAAYA--QSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASES-FH 168
Query: 362 MMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNG 414
+ G++ G LV++ + G+ E + M D V+W +
Sbjct: 169 GYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYR-DVVLWNLMLKA 220
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 235 bits (599), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 126/373 (33%), Positives = 222/373 (59%), Gaps = 19/373 (5%)
Query: 94 RPNNFIYPHVLKSCHESRSTGA-----VHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGN 148
+P+ + +L + +RS G+ +H IVK GF+ Y +Q ++ Y+ +
Sbjct: 302 KPSEVMMVDLLSA--SARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVS-NDIKL 358
Query: 149 AEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFF 208
A + F+ + ++ S A+I+G+ + G V+ A ++FD+ ++D+ SWNA+I+G Q+
Sbjct: 359 ALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSP 418
Query: 209 SEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVD 268
+ LFREM++ + KP+ +T+V SA L+ GK H Y+ + +
Sbjct: 419 QLALHLFREMISSSQV------KPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPN 472
Query: 269 SFISNSLVDMYGKCGNLALARKVFEMNPD---KGLTSWNSMINCFALHGQSEGAIAVFEQ 325
++ +++DMY KCG++ A +F + ++ WN++I A HG ++ A+ ++
Sbjct: 473 DNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSD 532
Query: 326 MVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGR 385
+ ++P+ +TFVG+L+AC H GLVE G +YFE M ++GIEP I+HYGC+VDLLG+
Sbjct: 533 LQSL--PIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGK 590
Query: 386 AGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIML 445
AGR +EA E+++ M ++ D ++WG L + + +G ++AE AA +L IDP +GG +ML
Sbjct: 591 AGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVML 650
Query: 446 ANVYGELGKWDEV 458
+NVY + G+W++V
Sbjct: 651 SNVYADAGRWEDV 663
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 173/378 (45%), Gaps = 59/378 (15%)
Query: 121 VKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSA 180
+K E V T L+ Y L L +A K+FDEM ERN+V++ M++GY++ G ++ A
Sbjct: 200 IKLKLEGRVFVSTNLLHMYCLCLC-LKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQA 258
Query: 181 LKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCN-KPNPVTLVC 239
+LFD++ E+D+ SW +I GC + E + + EM+ RC KP+ V +V
Sbjct: 259 EELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEML--------RCGMKPSEVMMVD 310
Query: 240 ALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLAL------------ 287
LSA + G +HG + K F F+ +++ Y ++ L
Sbjct: 311 LLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDH 370
Query: 288 -------------------ARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVE 328
AR+VF+ DK + SWN+MI+ +A + A+ +F +M+
Sbjct: 371 IASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMIS 430
Query: 329 CGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGR 388
V+PD +T V + +A + G +E+G + + I P ++D+ + G
Sbjct: 431 -SSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFS-TIPPNDNLTAAIIDMYAKCGS 488
Query: 389 FDEAMEV------VRGMSMEPDEVVWGSLFNGCKVYGRTDLA--EFAAKKLLEIDPHNGG 440
+ A+ + + ++ P W ++ G +G LA ++ + L I P++
Sbjct: 489 IETALNIFHQTKNISSSTISP----WNAIICGSATHGHAKLALDLYSDLQSLPIKPNSIT 544
Query: 441 Y-GIMLANVYG---ELGK 454
+ G++ A + ELGK
Sbjct: 545 FVGVLSACCHAGLVELGK 562
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 141/288 (48%), Gaps = 21/288 (7%)
Query: 104 LKSCHESRSTGA---VHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERN 160
L SC S +H +++K+G + + ++++ Y++ L +AE VF + + +
Sbjct: 48 LGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAK-CRLLADAESVFRDHAKLD 106
Query: 161 VVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVA 220
SF M+ GY R + ALKLFD MPER S+ LI G QN +SE + LFREM
Sbjct: 107 SASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRN 166
Query: 221 LAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYG 280
L N VTL +SAC H + + + K F+S +L+ MY
Sbjct: 167 LGI-------MLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYC 219
Query: 281 KCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTF 340
C L ARK+F+ P++ L +WN M+N ++ G E A +F+Q+ E D V++
Sbjct: 220 LCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITE------KDIVSW 273
Query: 341 VGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGR 388
+++ C +++ Y+ M R G++P +VDLL + R
Sbjct: 274 GTMIDGCLRKNQLDEALVYYTEMLR-CGMKPS---EVMMVDLLSASAR 317
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 104/246 (42%), Gaps = 49/246 (19%)
Query: 236 TLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALAR------ 289
LV AL +C ++ + G+ IH V K+ + +I NS+++MY KC LA A
Sbjct: 43 ALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDH 102
Query: 290 -------------------------KVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFE 324
K+F++ P++ S+ ++I +A + Q A+ +F
Sbjct: 103 AKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFR 162
Query: 325 QMVECGGDVRPDGVTFVGLLNACTH-GGLVEQGCSYFEMMTREYGIEPQI------EHYG 377
+M G + + VT +++AC+H GG+ + C + + + +E ++ H
Sbjct: 163 EMRNLG--IMLNEVTLATVISACSHLGGIWD--CRMLQSLAIKLKLEGRVFVSTNLLHMY 218
Query: 378 CLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPH 437
CL L A + + M E + V W + NG G + AE ++ E D
Sbjct: 219 CLCLCLKDARKLFDEMP-------ERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIV 271
Query: 438 NGGYGI 443
+ G I
Sbjct: 272 SWGTMI 277
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 234 bits (598), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 122/342 (35%), Positives = 192/342 (56%), Gaps = 9/342 (2%)
Query: 165 TAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAE 224
TA+I Y G + SA +FD M E++V SWN++IA QNG + LF+E+ +
Sbjct: 369 TALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSL- 427
Query: 225 RGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGN 284
P+ T+ L A + L G+ IH Y+ K+ ++ ++ I NSLV MY CG+
Sbjct: 428 ------VPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGD 481
Query: 285 LALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLL 344
L ARK F K + SWNS+I +A+HG ++ +F +M+ V P+ TF LL
Sbjct: 482 LEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMI--ASRVNPNKSTFASLL 539
Query: 345 NACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPD 404
AC+ G+V++G YFE M REYGI+P IEHYGC++DL+GR G F A + M P
Sbjct: 540 AACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPT 599
Query: 405 EVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRI 464
+WGSL N + + +AEFAA+++ +++ N G ++L N+Y E G+W++V + +
Sbjct: 600 ARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLL 659
Query: 465 LKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLE 506
++ + + S +E + H F + D+S ++Y VL+
Sbjct: 660 MESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLD 701
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 152/324 (46%), Gaps = 50/324 (15%)
Query: 93 TRPNNFIYPHVLKSCHESRST---GAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNA 149
+ + F YP V+KS S +HA ++K GF V +L+ Y + LG +A
Sbjct: 126 VKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMK-LGCAWDA 184
Query: 150 EKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFS 209
EKVF+EM ER++VS+ +MISGY +GD S+L LF EM + GF
Sbjct: 185 EKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEM---------------LKCGF-- 227
Query: 210 EGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFV-D 268
KP+ + + AL AC H ++GK IH + ++ D
Sbjct: 228 ---------------------KPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGD 266
Query: 269 SFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVE 328
+ S++DMY K G ++ A ++F + + +WN MI C+A +G+ A F++M E
Sbjct: 267 VMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSE 326
Query: 329 CGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGR 388
G ++PD +T + LL A ++E + M R G P + L+D+ G G+
Sbjct: 327 QNG-LQPDVITSINLLPA---SAILEGRTIHGYAMRR--GFLPHMVLETALIDMYGECGQ 380
Query: 389 FDEAMEVVRGMSMEPDEVVWGSLF 412
A EV+ E + + W S+
Sbjct: 381 LKSA-EVIFDRMAEKNVISWNSII 403
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 26/285 (9%)
Query: 157 RERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFR 216
++ N + T + G+A ++ AL+LFDEM + D WN +I G T G + E ++ +
Sbjct: 60 KQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYS 119
Query: 217 EMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLV 276
MV K + T + + S L+ GK IH V K F D ++ NSL+
Sbjct: 120 RMVFAGV-------KADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLI 172
Query: 277 DMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPD 336
+Y K G A KVFE P++ + SWNSMI+ + G ++ +F++M++CG +PD
Sbjct: 173 SLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCG--FKPD 230
Query: 337 GVTFVGLLNACTHGGLVEQGCSYFEMMTRE---YGIEPQIEHYGCLV-----DLLGRAGR 388
+ + L AC+H Y M +E + + +IE +V D+ + G
Sbjct: 231 RFSTMSALGACSH--------VYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGE 282
Query: 389 FDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLE 433
A + GM ++ + V W + GR A +K+ E
Sbjct: 283 VSYAERIFNGM-IQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSE 326
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 102/442 (23%), Positives = 186/442 (42%), Gaps = 69/442 (15%)
Query: 23 KQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSPNIYLYTS------- 75
K++ A + LG +D Y + + L A ++F+ + +I + S
Sbjct: 150 KKIHAMVIKLGFV-SDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLA 208
Query: 76 -----STFSLFRRMLCNSNPTTTRPNNFIYPHVLKSC---HESRSTGAVHAQIVKTGFEQ 127
S+ LF+ ML +P+ F L +C + + +H V++ E
Sbjct: 209 LGDGFSSLMLFKEML----KCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIET 264
Query: 128 YPI-VQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDE 186
+ V T+++D YS+ G + AE++F+ M +RN+V++ MI YAR G V A F +
Sbjct: 265 GDVMVMTSILDMYSK-YGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQK 323
Query: 187 MPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGH 246
M E QNG +P+ +T + L A
Sbjct: 324 MSE--------------QNGL-----------------------QPDVITSINLLPA--- 343
Query: 247 TSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSM 306
S + G+ IHGY + F + +L+DMYG+CG L A +F+ +K + SWNS+
Sbjct: 344 -SAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSI 402
Query: 307 INCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTRE 366
I + +G++ A+ +F+++ + + PD T +L A + +G + +
Sbjct: 403 IAAYVQNGKNYSALELFQELWD--SSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKS 460
Query: 367 YGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKV--YGRTDLA 424
I LV + G ++A + + ++ D V W S+ V +GR +
Sbjct: 461 RYWSNTI-ILNSLVHMYAMCGDLEDARKCFNHILLK-DVVSWNSIIMAYAVHGFGRISVW 518
Query: 425 EFAAKKLLEIDPHNGGYGIMLA 446
F+ ++P+ + +LA
Sbjct: 519 LFSEMIASRVNPNKSTFASLLA 540
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 24/183 (13%)
Query: 55 LPYARRIFDHLHSPNIYLYTS------------STFSLFRRMLCNSNPTTTRPNNFIYPH 102
L A IFD + N+ + S S LF+ + ++ P++
Sbjct: 381 LKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELW----DSSLVPDSTTIAS 436
Query: 103 VLKSCHESRSTGA---VHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRER 159
+L + ES S +HA IVK+ + I+ +LV Y+ G L +A K F+ + +
Sbjct: 437 ILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAM-CGDLEDARKCFNHILLK 495
Query: 160 NVVSFTAMISGYARVGDVDSALKLFDEMPERDV----PSWNALIAGCTQNGFFSEGIRLF 215
+VVS+ ++I YA G ++ LF EM V ++ +L+A C+ +G EG F
Sbjct: 496 DVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYF 555
Query: 216 REM 218
M
Sbjct: 556 ESM 558
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 234 bits (598), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 127/341 (37%), Positives = 193/341 (56%), Gaps = 9/341 (2%)
Query: 166 AMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAER 225
+M+ Y+ G++ SA LF M RD+ SW+ +I G Q GF EG + F M +
Sbjct: 350 SMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWM----RQS 405
Query: 226 GYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNL 285
G KP L LS G+ ++++ G+ +H +S + +SL++MY KCG++
Sbjct: 406 G---TKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSI 462
Query: 286 ALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLN 345
A +F + S +MIN +A HG+S+ AI +FE+ ++ G RPD VTF+ +L
Sbjct: 463 KEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVG--FRPDSVTFISVLT 520
Query: 346 ACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDE 405
ACTH G ++ G YF MM Y + P EHYGC+VDLL RAGR +A +++ MS + D+
Sbjct: 521 ACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDD 580
Query: 406 VVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRIL 465
VVW +L CK G + AA+++LE+DP + LAN+Y G +E NV + +
Sbjct: 581 VVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNM 640
Query: 466 KQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLE 506
K + K PG S I+I D V F S D+ P++E++Y++LE
Sbjct: 641 KAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILE 681
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 152/382 (39%), Gaps = 72/382 (18%)
Query: 54 NLPYARRIFDHLHSPNIYLYTSSTFSLFRRMLCNSNPT--------------TTRPNNFI 99
NL AR++FD + +I +TS + +R + +N P+ +
Sbjct: 55 NLRAARQVFDKMPHGDIVSWTS----IIKRYVTANNSDEALILFSAMRVVDHAVSPDTSV 110
Query: 100 YPHVLKSCHESRSTG---AVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEM 156
VLK+C +S + ++HA VKT V ++L+D Y R
Sbjct: 111 LSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKR--------------- 155
Query: 157 RERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFR 216
VG +D + ++F EMP R+ +W A+I G G + EG+ F
Sbjct: 156 -----------------VGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFS 198
Query: 217 EMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLV 276
EM R + + T AL AC ++ GK IH +V F ++NSL
Sbjct: 199 EM-----SRSEELS--DTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLA 251
Query: 277 DMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPD 336
MY +CG + +FE ++ + SW S+I + GQ A+ F +M V P+
Sbjct: 252 TMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMR--NSQVPPN 309
Query: 337 GVTFVGLLNACTHGGLVEQG----CSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEA 392
TF + +AC + G C+ + G+ + ++ + G A
Sbjct: 310 EQTFASMFSACASLSRLVWGEQLHCNVLSL-----GLNDSLSVSNSMMKMYSTCGNLVSA 364
Query: 393 MEVVRGMSMEPDEVVWGSLFNG 414
+ +GM D + W ++ G
Sbjct: 365 SVLFQGMRCR-DIISWSTIIGG 385
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 141/336 (41%), Gaps = 25/336 (7%)
Query: 113 TGAVHAQIVKTGFEQYPIVQTA--LVDSYS--------RGLGGLGNAEKVFDEMRERNVV 162
TG VHA K G + + + L D+Y+ GL + + + + R V
Sbjct: 182 TGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFV 241
Query: 163 SF----TAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREM 218
+ ++ + Y G++ L LF+ M ERDV SW +LI + G + + F +M
Sbjct: 242 TTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKM 301
Query: 219 VALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDM 278
R + PN T SAC S L G+ +H V +SNS++ M
Sbjct: 302 ------RNSQV-PPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKM 354
Query: 279 YGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGV 338
Y CGNL A +F+ + + SW+++I + G E F M + G +P
Sbjct: 355 YSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSG--TKPTDF 412
Query: 339 TFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRG 398
LL+ + ++E G + +G+E L+++ + G EA ++ G
Sbjct: 413 ALASLLSVSGNMAVIEGG-RQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEA-SMIFG 470
Query: 399 MSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEI 434
+ D V ++ NG +G++ A +K L++
Sbjct: 471 ETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKV 506
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 112/284 (39%), Gaps = 50/284 (17%)
Query: 175 GDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNP 234
G++ +A ++FD+MP D+ SW ++I E + LF M + P+
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVD-----HAVSPDT 108
Query: 235 VTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEM 294
L L ACG +S + G+ +H Y K ++ +SL+DMY + G + + +VF
Sbjct: 109 SVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSE 168
Query: 295 NPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNAC------- 347
P + +W ++I G+ + + F +M + D TF L AC
Sbjct: 169 MPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSR--SEELSDTYTFAIALKACAGLRQVK 226
Query: 348 ----------------------------THGGLVEQGCSYFEMMTREYGIEPQIEHYGCL 379
T G ++ G FE M+ E + + L
Sbjct: 227 YGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMS-----ERDVVSWTSL 281
Query: 380 VDLLGRAGRFDEAMEV---VRGMSMEPDEVVWGSLFNGCKVYGR 420
+ R G+ +A+E +R + P+E + S+F+ C R
Sbjct: 282 IVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSR 325
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 61/151 (40%), Gaps = 2/151 (1%)
Query: 270 FISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVEC 329
F NS + GNL AR+VF+ P + SW S+I + S+ A+ +F M
Sbjct: 41 FDPNSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVV 100
Query: 330 GGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRF 389
V PD +L AC + G S + + + L+D+ R G+
Sbjct: 101 DHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKT-SLLSSVYVGSSLLDMYKRVGKI 159
Query: 390 DEAMEVVRGMSMEPDEVVWGSLFNGCKVYGR 420
D++ V M + V W ++ G GR
Sbjct: 160 DKSCRVFSEMPFR-NAVTWTAIITGLVHAGR 189
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 234 bits (598), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 130/397 (32%), Positives = 209/397 (52%), Gaps = 44/397 (11%)
Query: 117 HAQIVKTGFEQYPIVQTALVDSYSR--GLGGLGNAEKVFDEMRERNVVSFTAMISGYARV 174
H +++K GF Q V + L+D YS+ G G+ ++EKVF
Sbjct: 263 HGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQ-------------------- 302
Query: 175 GDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSE-GIRLFREMVALAAERGYRCNKPN 233
E+ D+ WN +I+G + N SE ++ FR+M + ++P+
Sbjct: 303 -----------EILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIG-------HRPD 344
Query: 234 PVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSF-ISNSLVDMYGKCGNLALARKVF 292
+ VC SAC + S K IHG K+ + ++N+L+ +Y K GNL AR VF
Sbjct: 345 DCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVF 404
Query: 293 EMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGL 352
+ P+ S+N MI +A HG A+ ++++M++ G + P+ +TFV +L+AC H G
Sbjct: 405 DRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSG--IAPNKITFVAVLSACAHCGK 462
Query: 353 VEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLF 412
V++G YF M + IEP+ EHY C++DLLGRAG+ +EA + M +P V W +L
Sbjct: 463 VDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALL 522
Query: 413 NGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYK 472
C+ + LAE AA +L+ + P +MLAN+Y + KW+E+ +V + ++ ++ K
Sbjct: 523 GACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRK 582
Query: 473 VPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESLI 509
PGCSWIE+ + H F + D S P E+ LE ++
Sbjct: 583 KPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMM 619
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 119/486 (24%), Positives = 216/486 (44%), Gaps = 69/486 (14%)
Query: 14 GKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSPNIYLY 73
GKS H ++K + A T L + + Y+ L YAR F PN++ Y
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYS---------KCGRLSYARAAFYSTEEPNVFSY 77
Query: 74 TSSTFSLFR-------RMLCNSNPTTTRPNNFIYPHVLKSCHESRSTGA---VHAQIVKT 123
+ + R L + P +P+ Y ++ ++R T A + ++ K
Sbjct: 78 NVIVKAYAKDSKIHIARQLFDEIP---QPDTVSYNTLISGYADARETFAAMVLFKRMRKL 134
Query: 124 GFEQYPIVQTALVDSYSRGLGGLGNA--EKVFDEMRERNVVSFT-----------AMISG 170
GFE VD ++ L GL A ++V D +++ + S + A ++
Sbjct: 135 GFE---------VDGFT--LSGLIAACCDRV-DLIKQLHCFSVSGGFDSYSSVNNAFVTY 182
Query: 171 YARVGDVDSALKLFDEMPE-RDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRC 229
Y++ G + A+ +F M E RD SWN++I Q+ ++ + L++EM+ ++
Sbjct: 183 YSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMI-------FKG 235
Query: 230 NKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCG---NLA 286
K + TL L+A L G+ HG + K F +S + + L+D Y KCG +
Sbjct: 236 FKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMY 295
Query: 287 LARKVFE--MNPDKGLTSWNSMINCFALHGQ-SEGAIAVFEQMVECGGDVRPDGVTFVGL 343
+ KVF+ ++PD L WN+MI+ ++++ + SE A+ F QM G RPD +FV +
Sbjct: 296 DSEKVFQEILSPD--LVVWNTMISGYSMNEELSEEAVKSFRQMQRIGH--RPDDCSFVCV 351
Query: 344 LNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEP 403
+AC++ Q + + + +I L+ L ++G +A V M E
Sbjct: 352 TSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMP-EL 410
Query: 404 DEVVWGSLFNGCKVYGRTDLAEFAAKKLLE--IDPHNGGYGIMLANVYGELGKWDEVRNV 461
+ V + + G +G A +++L+ I P+ + +L+ GK DE +
Sbjct: 411 NAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSAC-AHCGKVDEGQEY 469
Query: 462 WRILKQ 467
+ +K+
Sbjct: 470 FNTMKE 475
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 95/233 (40%), Gaps = 28/233 (12%)
Query: 9 VLTILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALT--LSNLPYARRIFDHLH 66
VL L +HL +Q L G L+ F + + + ++F +
Sbjct: 246 VLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEIL 305
Query: 67 SPNIYLYTS--STFSL-----------FRRMLCNSNPTTTRPNNFIYPHVLKSCHESRST 113
SP++ ++ + S +S+ FR+M RP++ + V +C S
Sbjct: 306 SPDLVVWNTMISGYSMNEELSEEAVKSFRQM----QRIGHRPDDCSFVCVTSACSNLSSP 361
Query: 114 GA---VHAQIVKTGFEQYPI-VQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMIS 169
+H +K+ I V AL+ Y + G L +A VFD M E N VSF MI
Sbjct: 362 SQCKQIHGLAIKSHIPSNRISVNNALISLYYKS-GNLQDARWVFDRMPELNAVSFNCMIK 420
Query: 170 GYARVGDVDSALKLFDEMPERDVP----SWNALIAGCTQNGFFSEGIRLFREM 218
GYA+ G AL L+ M + + ++ A+++ C G EG F M
Sbjct: 421 GYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTM 473
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 120/343 (34%), Positives = 194/343 (56%), Gaps = 10/343 (2%)
Query: 167 MISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERG 226
+I+ Y++ D+ AL +F + E + +WN++I+G Q E L REM+ G
Sbjct: 321 LITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLV----AG 376
Query: 227 YRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVD-SFISNSLVDMYGKCGNL 285
+ +PN +TL L C + LQ GK H Y+ + F D + + NSLVD+Y K G +
Sbjct: 377 F---QPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKI 433
Query: 286 ALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLN 345
A++V ++ + ++ S+I+ + G+ A+A+F++M G ++PD VT V +L+
Sbjct: 434 VAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSG--IKPDHVTVVAVLS 491
Query: 346 ACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDE 405
AC+H LV +G F M EYGI P ++H+ C+VDL GRAG +A +++ M +P
Sbjct: 492 ACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSG 551
Query: 406 VVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRIL 465
W +L N C ++G T + ++AA+KLLE+ P N GY +++AN+Y G W ++ V I+
Sbjct: 552 ATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIM 611
Query: 466 KQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESL 508
+ K PGC+WI+ D F D SSP+A Y +L+ L
Sbjct: 612 RDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGL 654
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 119/407 (29%), Positives = 189/407 (46%), Gaps = 29/407 (7%)
Query: 24 QLQAHLTTLGHAHTDFYAFKLVRF-CALTLSNLPYARRIF---DHLHSP--NIYLYTSST 77
Q+ AH + G + KLV F A L N A+ I D LH N+ + + +
Sbjct: 64 QVHAHCISSGVEYHSVLVPKLVTFYSAFNLHN--EAQSIIENSDILHPLPWNVLIASYAK 121
Query: 78 FSLFRRMLCNSNPTTT---RPNNFIYPHVLKSCHESRSTG---AVHAQIVKTGFEQYPIV 131
LF ++ + RP+ F YP VLK+C E+ VH I + ++ V
Sbjct: 122 NELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYV 181
Query: 132 QTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEM---- 187
AL+ Y R +G A ++FD M ER+ VS+ A+I+ YA G A +LFD+M
Sbjct: 182 CNALISMYKR-FRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSG 240
Query: 188 PERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHT 247
E V +WN + GC Q G + + L M R + +PV ++ L AC
Sbjct: 241 VEVSVITWNIISGGCLQTGNYVGALGLISRM------RNFP-TSLDPVAMIIGLKACSLI 293
Query: 248 SMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMI 307
++LGK IHG + + + N+L+ MY KC +L A VF + L +WNS+I
Sbjct: 294 GAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSII 353
Query: 308 NCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREY 367
+ +A +SE A + +M+ G +P+ +T +L C ++ G + + R
Sbjct: 354 SGYAQLNKSEEASHLLREMLVAG--FQPNSITLASILPLCARIANLQHGKEFHCYILRRK 411
Query: 368 GIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNG 414
+ + LVD+ ++G+ A +V MS + DEV + SL +G
Sbjct: 412 CFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMS-KRDEVTYTSLIDG 457
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 87/168 (51%), Gaps = 11/168 (6%)
Query: 164 FTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAA 223
+ +++ YA+ G + +A ++ D M +RD ++ +LI G G + LF+EM
Sbjct: 420 WNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGI 479
Query: 224 ERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFIS--NSLVDMYGK 281
KP+ VT+V LSAC H+ ++ G+ + + + ++ + + + +VD+YG+
Sbjct: 480 -------KPDHVTVVAVLSACSHSKLVHEGERLFMKM-QCEYGIRPCLQHFSCMVDLYGR 531
Query: 282 CGNLALARKVFEMNPDK-GLTSWNSMINCFALHGQSEGAIAVFEQMVE 328
G LA A+ + P K +W +++N +HG ++ E+++E
Sbjct: 532 AGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLE 579
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 133/407 (32%), Positives = 217/407 (53%), Gaps = 16/407 (3%)
Query: 76 STFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTG---AVHAQIVKTGFEQYPIVQ 132
++ +LF ML + +PNN +P ++K+ S S A+H Q +K GF P VQ
Sbjct: 69 TSLALFTHMLASH----VQPNNLTFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQ 124
Query: 133 TALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDV 192
T+ V Y +G L ++ K+FD++ VV+ +++ R G++D A + F MP DV
Sbjct: 125 TSFVRFYGE-VGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDV 183
Query: 193 PSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSM--L 250
SW +I G ++ G ++ + +F EM+ ER PN T V LS+C + +
Sbjct: 184 VSWTTVINGFSKKGLHAKALMVFGEMIQ--NERAVI--TPNEATFVSVLSSCANFDQGGI 239
Query: 251 QLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCF 310
+LGK IHGYV + + + + +L+DMYGK G+L +A +F+ DK + +WN++I+
Sbjct: 240 RLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISAL 299
Query: 311 ALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIE 370
A +G+ + A+ +FE M V P+G+T + +L AC LV+ G F + EY I
Sbjct: 300 ASNGRPKQALEMFEMMKS--SYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKII 357
Query: 371 PQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKK 430
P EHYGC+VDL+GRAG +A ++ + EPD V G+L CK++ T+L K+
Sbjct: 358 PTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNTVGKQ 417
Query: 431 LLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVPGCS 477
L+ + P + G + L+ W E + + + + K+P S
Sbjct: 418 LIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 123/352 (34%), Positives = 195/352 (55%), Gaps = 12/352 (3%)
Query: 130 IVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPE 189
I ++D Y + + +A +F EM R+ S+ M+SGYA VG+V+ A F++ PE
Sbjct: 313 ISWNTMIDGYVH-VSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPE 371
Query: 190 RDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSM 249
+ SWN++IA +N + E + LF M KP+P TL LSA
Sbjct: 372 KHTVSWNSIIAAYEKNKDYKEAVDLFIRM-------NIEGEKPDPHTLTSLLSASTGLVN 424
Query: 250 LQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVF-EMNPDKGLTSWNSMIN 308
L+LG +H V K D + N+L+ MY +CG + +R++F EM + + +WN+MI
Sbjct: 425 LRLGMQMHQIVVKT-VIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIG 483
Query: 309 CFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYG 368
+A HG + A+ +F M G + P +TFV +LNAC H GLV++ + F M Y
Sbjct: 484 GYAFHGNASEALNLFGSMKSNG--IYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYK 541
Query: 369 IEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAA 428
IEPQ+EHY LV++ G+F+EAM ++ M EPD+ VWG+L + C++Y LA AA
Sbjct: 542 IEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAA 601
Query: 429 KKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVPGCSWIE 480
+ + ++P + ++L N+Y ++G WDE V ++ ++ K G SW++
Sbjct: 602 EAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 115/246 (46%), Gaps = 41/246 (16%)
Query: 142 GLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAG 201
G+ L A K+FDEM R+ S+ MISGYA+ + AL LF++MPER+ SW+A+I G
Sbjct: 117 GIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITG 176
Query: 202 CTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSA-CGHTSMLQLGKWIHG-- 258
QNG + LFR+M + + P +CAL A L W+ G
Sbjct: 177 FCQNGEVDSAVVLFRKMPV-------KDSSP-----LCALVAGLIKNERLSEAAWVLGQY 224
Query: 259 --YVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPD---------------KGLT 301
V + V ++ N+L+ YG+ G + AR +F+ PD K +
Sbjct: 225 GSLVSGREDLVYAY--NTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVV 282
Query: 302 SWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYF- 360
SWNSMI + G A +F+QM + D +++ +++ H +E + F
Sbjct: 283 SWNSMIKAYLKVGDVVSARLLFDQMKD------RDTISWNTMIDGYVHVSRMEDAFALFS 336
Query: 361 EMMTRE 366
EM R+
Sbjct: 337 EMPNRD 342
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 102/251 (40%), Gaps = 58/251 (23%)
Query: 144 GGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCT 203
G + A +F+++ RN V++ MISGY + +++ A KLFD MP+RDV +WN +I+G
Sbjct: 54 GYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYV 113
Query: 204 QNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKN 263
G GIR E L E R
Sbjct: 114 SCG----GIRFLEEARKLFDEMPSR----------------------------------- 134
Query: 264 DFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVF 323
DSF N+++ Y K + A +FE P++ SW++MI F +G+ + A+ +F
Sbjct: 135 ----DSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLF 190
Query: 324 EQMVECGGDVRPDGVTFVGLLN----------ACTHGGLV---EQGCSYFEMMTREYGIE 370
+M D P GL+ +G LV E + + YG
Sbjct: 191 RKMPV--KDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQR 248
Query: 371 PQIEHYGCLVD 381
Q+E CL D
Sbjct: 249 GQVEAARCLFD 259
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 232 bits (592), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 148/462 (32%), Positives = 228/462 (49%), Gaps = 56/462 (12%)
Query: 33 GHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSPNI---------YLYTSSTFSLFRR 83
G D+ A LV A L + A+++FD + N YL S +FR
Sbjct: 139 GLDKDDYVAPSLVEMYA-QLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFR- 196
Query: 84 MLCNSNPTTTRPNNFIYPHVLKSC---HESRSTGAVHAQIVKTGF-EQYPIVQTALVDSY 139
+ C T + ++K+C + VH ++ F +Q +Q +++D Y
Sbjct: 197 LFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMY 256
Query: 140 SRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALI 199
+ L NA K+F+ +RNVV +T +ISG+A+ A LF +M
Sbjct: 257 VK-CRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQM------------ 303
Query: 200 AGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGY 259
RE + PN TL L +C L+ GK +HGY
Sbjct: 304 ---------------LRESIL-----------PNQCTLAAILVSCSSLGSLRHGKSVHGY 337
Query: 260 VYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGA 319
+ +N +D+ S +DMY +CGN+ +AR VF+M P++ + SW+SMIN F ++G E A
Sbjct: 338 MIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEA 397
Query: 320 IAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCL 379
+ F +M +V P+ VTFV LL+AC+H G V++G FE MTR+YG+ P+ EHY C+
Sbjct: 398 LDCFHKMK--SQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACM 455
Query: 380 VDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNG 439
VDLLGRAG EA + M ++P WG+L + C+++ DLA A+KLL ++P
Sbjct: 456 VDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKS 515
Query: 440 GYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVPGCSWIEI 481
++L+N+Y + G W+ V V R + + K G S E+
Sbjct: 516 SVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSATEV 557
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 111/430 (25%), Positives = 188/430 (43%), Gaps = 56/430 (13%)
Query: 4 NLNEQVLTILGKSNHLNHLKQLQAHL--------TTLGHAHTDFY-AFKLVRFCALTLSN 54
N +LTIL ++ LNH +Q+ A + LG + T+ Y + F + +
Sbjct: 5 NRARALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNR 64
Query: 55 LPYARRIFDHLHSPNIYL--YTSSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRS 112
+P +R + HS N L Y+ S + +L +Y + + C S
Sbjct: 65 IPCWKR---NRHSWNTILSGYSKSKTCCYSDVL------------LLYNRMRRHCDGVDS 109
Query: 113 TGAVHA--QIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISG 170
V A V G + I+ L + GL +++ +++
Sbjct: 110 FNLVFAIKACVGLGLLENGILIHGL--AMKNGL--------------DKDDYVAPSLVEM 153
Query: 171 YARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCN 230
YA++G ++SA K+FDE+P R+ W L+ G + E RLF L + G
Sbjct: 154 YAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLF----CLMRDTGL--- 206
Query: 231 KPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDS-FISNSLVDMYGKCGNLALAR 289
+ +TL+C + ACG+ ++GK +HG + F S ++ S++DMY KC L AR
Sbjct: 207 ALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNAR 266
Query: 290 KVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTH 349
K+FE + D+ + W ++I+ FA ++ A +F QM+ + P+ T +L +C+
Sbjct: 267 KLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLR--ESILPNQCTLAAILVSCSS 324
Query: 350 GGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWG 409
G + G S M R GIE ++ +D+ R G A V M E + + W
Sbjct: 325 LGSLRHGKSVHGYMIRN-GIEMDAVNFTSFIDMYARCGNIQMARTVFDMMP-ERNVISWS 382
Query: 410 SLFNGCKVYG 419
S+ N + G
Sbjct: 383 SMINAFGING 392
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 232 bits (591), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 140/440 (31%), Positives = 229/440 (52%), Gaps = 60/440 (13%)
Query: 55 LPYARRIFDHLHSPNIYL------------YTSSTFSLFRRMLCNSNPTTTRPNNFIYPH 102
P + +F H+ NI+ + S + LF RM + RP++F P
Sbjct: 83 FPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMW---RESCVRPDDFTLPL 139
Query: 103 VLKSC---HESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRER 159
+L++C E++S +H +K GF V +ALV Y +G L +A K+FD+M R
Sbjct: 140 ILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYV-DMGKLLHARKLFDDMPVR 198
Query: 160 NVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMV 219
+ V +TAM GY + G+ A++ G+ +FREM
Sbjct: 199 DSVLYTAMFGGYVQQGE--------------------AML-----------GLAMFREM- 226
Query: 220 ALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMY 279
GY + V +V L ACG L+ GK +HG+ + + + N++ DMY
Sbjct: 227 ------GYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMY 280
Query: 280 GKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVT 339
KC L A VF + + SW+S+I + L G + +F++M++ G + P+ VT
Sbjct: 281 VKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEG--IEPNAVT 338
Query: 340 FVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGM 399
F+G+L+AC HGGLVE+ YF +M +EY I P+++HY + D + RAG +EA + + M
Sbjct: 339 FLGVLSACAHGGLVEKSWLYFRLM-QEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDM 397
Query: 400 SMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVR 459
++PDE V G++ +GCKVYG ++ E A++L+++ P Y + LA +Y G++DE
Sbjct: 398 PVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAE 457
Query: 460 NVWRILKQQKSYKVPGCSWI 479
++ + +K+++ KVPGCS I
Sbjct: 458 SLRQWMKEKQISKVPGCSSI 477
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 144/320 (45%), Gaps = 23/320 (7%)
Query: 160 NVVSFTAMISGYARVGDV-DSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREM 218
NVV + ++ Y+++ + ++L +F MP R++ SWN +I +++GF S+ I LF M
Sbjct: 65 NVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRM 124
Query: 219 VALAAERGYR--CNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLV 276
+R C +P+ TL L AC + + G IH K F F+S++LV
Sbjct: 125 --------WRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALV 176
Query: 277 DMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPD 336
MY G L ARK+F+ P + + +M + G++ +A+F +M G + D
Sbjct: 177 IMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFAL--D 234
Query: 337 GVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVV 396
V V LL AC G ++ G S R + + D+ + D A V
Sbjct: 235 SVVMVSLLMACGQLGALKHGKSVHGWCIRRCSC-LGLNLGNAITDMYVKCSILDYAHTVF 293
Query: 397 RGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLE--IDPHNGGY-GIMLANVYGELG 453
MS D + W SL G + G ++ ++L+ I+P+ + G++ A +G L
Sbjct: 294 VNMS-RRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGL- 351
Query: 454 KWDEVRNVWRILKQQKSYKV 473
V W + + Y +
Sbjct: 352 ----VEKSWLYFRLMQEYNI 367
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 107/300 (35%), Positives = 181/300 (60%), Gaps = 8/300 (2%)
Query: 167 MISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERG 226
+I+ Y++ DV++ L LF+++ E + SWN++I+GC Q+G S +F +M+
Sbjct: 388 LITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLL- 446
Query: 227 YRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLA 286
P+ +T+ L+ C L LGK +HGY +N+F ++F+ +L+DMY KCGN
Sbjct: 447 -----PDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEV 501
Query: 287 LARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNA 346
A VF+ +WNSMI+ ++L G A++ + +M E G ++PD +TF+G+L+A
Sbjct: 502 QAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKG--LKPDEITFLGVLSA 559
Query: 347 CTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEV 406
C HGG V++G F M +E+GI P ++HY +V LLGRA F EA+ ++ M ++PD
Sbjct: 560 CNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSA 619
Query: 407 VWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILK 466
VWG+L + C ++ ++ E+ A+K+ +D NGG ++++N+Y WD+V V ++K
Sbjct: 620 VWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMK 679
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 134/277 (48%), Gaps = 48/277 (17%)
Query: 74 TSSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTGAVHAQIVKTGFEQYPI--- 130
+SS ++FR +L ++ PN+F T ++ Q T F + +
Sbjct: 29 SSSPITIFRDLL----RSSLTPNHF--------------TMSIFLQATTTSFNSFKLQVE 70
Query: 131 -VQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPE 189
VQT L S GL +R V T++++ Y + G V SA LFDEMPE
Sbjct: 71 QVQTHLTKS------GL-----------DRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPE 113
Query: 190 RDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSM 249
RD WNALI G ++NG+ + +LF M+ ++G+ P+ TLV L CG
Sbjct: 114 RDTVVWNALICGYSRNGYECDAWKLFIVML----QQGF---SPSATTLVNLLPFCGQCGF 166
Query: 250 LQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINC 309
+ G+ +HG K+ +DS + N+L+ Y KC L A +F DK SWN+MI
Sbjct: 167 VSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGA 226
Query: 310 FALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNA 346
++ G E AI VF+ M E ++ P VT + LL+A
Sbjct: 227 YSQSGLQEEAITVFKNMFEKNVEISP--VTIINLLSA 261
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 112/476 (23%), Positives = 188/476 (39%), Gaps = 91/476 (19%)
Query: 21 HLKQLQAHLTTLG-----HAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSPNIYL--- 72
++Q+Q HLT G + T L + C + A+ +FD + + +
Sbjct: 68 QVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTS------AQMLFDEMPERDTVVWNA 121
Query: 73 ---------YTSSTFSLFRRMLCNS-NPTTTRPNNFIYPHVLKSCHESRSTGAVHAQIVK 122
Y + LF ML +P+ T N + P C +VH K
Sbjct: 122 LICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLL-PFC-GQCGFVSQGRSVHGVAAK 179
Query: 123 TGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALK 182
+G E V+ AL+ YS+ LG+AE +F EM++++ VS+ MI Y++ G + A+
Sbjct: 180 SGLELDSQVKNALISFYSK-CAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAIT 238
Query: 183 LFDEMPER---------------------------------DVPSWNALIAGCTQNGFFS 209
+F M E+ D+ +L+ ++ G
Sbjct: 239 VFKNMFEKNVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLV 298
Query: 210 EGIRLF-----------REMVALAAERG-------------YRCNKPNPVTLVCALSACG 245
RL+ +V+ AE+G C K + V LV L C
Sbjct: 299 SAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCK 358
Query: 246 HTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNS 305
+S + +G +HGY K+ + + N L+ MY K ++ +FE + L SWNS
Sbjct: 359 KSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNS 418
Query: 306 MINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTR 365
+I+ G++ A VF QM+ GG + PD +T LL C+ + G R
Sbjct: 419 VISGCVQSGRASTAFEVFHQMMLTGG-LLPDAITIASLLAGCSQLCCLNLGKELHGYTLR 477
Query: 366 EYGIEPQIEHYGC--LVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYG 419
+ E++ C L+D+ + G +A V + + P W S+ +G + G
Sbjct: 478 N---NFENENFVCTALIDMYAKCGNEVQAESVFKSIK-APCTATWNSMISGYSLSG 529
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 117/262 (44%), Gaps = 23/262 (8%)
Query: 166 AMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAER 225
A+IS Y++ ++ SA LF EM ++ SWN +I +Q+G E I +F+ M E
Sbjct: 191 ALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVE- 249
Query: 226 GYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNL 285
+PVT++ LSA H S L H V K D + SLV Y +CG L
Sbjct: 250 ------ISPVTIINLLSA--HVSHEPL----HCLVVKCGMVNDISVVTSLVCAYSRCGCL 297
Query: 286 ALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLN 345
A +++ + S+++C+A G + A+ F + + ++ D V VG+L+
Sbjct: 298 VSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLC--MKIDAVALVGILH 355
Query: 346 ACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVD-LLGRAGRFDEAMEVVRGMS--ME 402
C ++ G M Y I+ + +V+ L+ +FD+ V+ E
Sbjct: 356 GCKKSSHIDIG-----MSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQE 410
Query: 403 PDEVVWGSLFNGCKVYGRTDLA 424
+ W S+ +GC GR A
Sbjct: 411 TPLISWNSVISGCVQSGRASTA 432
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 11/152 (7%)
Query: 75 SSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTG---AVHAQIVKTGFEQYPIV 131
S+ F +F +M+ P+ +L C + +H ++ FE V
Sbjct: 430 STAFEVFHQMMLTGG---LLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFV 486
Query: 132 QTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPER- 190
TAL+D Y++ G AE VF ++ ++ +MISGY+ G AL + EM E+
Sbjct: 487 CTALIDMYAK-CGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKG 545
Query: 191 ---DVPSWNALIAGCTQNGFFSEGIRLFREMV 219
D ++ +++ C GF EG FR M+
Sbjct: 546 LKPDEITFLGVLSACNHGGFVDEGKICFRAMI 577
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 114/259 (44%), Gaps = 29/259 (11%)
Query: 190 RDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACG---H 246
RD+ +++L+ C S I +FR+++ + PN T+ L A +
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSL-------TPNHFTMSIFLQATTTSFN 63
Query: 247 TSMLQLGKWIHGYVYKN--DFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWN 304
+ LQ+ + + ++ K+ D FV ++ SL+++Y K G + A+ +F+ P++ WN
Sbjct: 64 SFKLQVEQ-VQTHLTKSGLDRFV--YVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWN 120
Query: 305 SMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMT 364
++I ++ +G A +F M++ G P T V LL C G V QG S +
Sbjct: 121 ALICGYSRNGYECDAWKLFIVMLQQG--FSPSATTLVNLLPFCGQCGFVSQGRSVHGVAA 178
Query: 365 REYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLA 424
+ G+E + L+ + A + R M + V W ++ Y ++ L
Sbjct: 179 KS-GLELDSQVKNALISFYSKCAELGSAEVLFREMK-DKSTVSWNTMIGA---YSQSGLQ 233
Query: 425 EFAA-------KKLLEIDP 436
E A +K +EI P
Sbjct: 234 EEAITVFKNMFEKNVEISP 252
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 126/367 (34%), Positives = 203/367 (55%), Gaps = 16/367 (4%)
Query: 145 GLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPER-DVPSWNALIAGCT 203
GL + DE N A+I+ Y + G++D K+F M ER D +WN++I+G
Sbjct: 541 GLALKNNIADEATTEN-----ALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYI 595
Query: 204 QNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKN 263
N ++ + ++V + G R + T+ LSA + L+ G +H +
Sbjct: 596 HNELLAKAL----DLVWFMLQTGQRLDSFMYATV---LSAFASVATLERGMEVHACSVRA 648
Query: 264 DFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVF 323
D + ++LVDMY KCG L A + F P + SWNSMI+ +A HGQ E A+ +F
Sbjct: 649 CLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLF 708
Query: 324 EQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLL 383
E M + G PD VTFVG+L+AC+H GL+E+G +FE M+ YG+ P+IEH+ C+ D+L
Sbjct: 709 ETM-KLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVL 767
Query: 384 GRAGRFDEAMEVVRGMSMEPDEVVWGSLFNG-CKVYGR-TDLAEFAAKKLLEIDPHNGGY 441
GRAG D+ + + M M+P+ ++W ++ C+ GR +L + AA+ L +++P N
Sbjct: 768 GRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVN 827
Query: 442 GIMLANVYGELGKWDEVRNVWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEEL 501
++L N+Y G+W+++ + +K K G SW+ + D VH F + D+S P A+ +
Sbjct: 828 YVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVI 887
Query: 502 YSVLESL 508
Y L+ L
Sbjct: 888 YKKLKEL 894
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 114/239 (47%), Gaps = 18/239 (7%)
Query: 151 KVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSE 210
+++ +++V +I+ Y GD SA K+FDEMP R+ SW +++G ++NG E
Sbjct: 26 RLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKE 85
Query: 211 GIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSF 270
+ R+MV + G N+ V+++ A G +L G+ IHG ++K + VD+
Sbjct: 86 ALVFLRDMV----KEGIFSNQYAFVSVLRACQEIGSVGIL-FGRQIHGLMFKLSYAVDAV 140
Query: 271 ISNSLVDMYGKC-GNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVEC 329
+SN L+ MY KC G++ A F K SWNS+I+ ++ G A +F M
Sbjct: 141 VSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYD 200
Query: 330 GGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREY-GIEPQIEHYGCLVDLLGRAG 387
G RP TF G LV CS E R I I+ G L DL +G
Sbjct: 201 GS--RPTEYTF---------GSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSG 248
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 120/256 (46%), Gaps = 22/256 (8%)
Query: 165 TAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAE 224
+ ++S +A+ G + A K+F++M R+ + N L+ G + + E +LF +M ++
Sbjct: 247 SGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMI-- 304
Query: 225 RGYRCNKPNPVTLVCALSACGHTSM-----LQLGKWIHGYVYKN---DFFVDSFISNSLV 276
+P + V LS+ S+ L+ G+ +HG+V DF V I N LV
Sbjct: 305 ------DVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVG--IGNGLV 356
Query: 277 DMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPD 336
+MY KCG++A AR+VF DK SWNSMI +G A+ ++ M D+ P
Sbjct: 357 NMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRR--HDILPG 414
Query: 337 GVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVV 396
T + L++C + G + + GI+ + L+ L G +E ++
Sbjct: 415 SFTLISSLSSCASLKWAKLG-QQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIF 473
Query: 397 RGMSMEPDEVVWGSLF 412
M E D+V W S+
Sbjct: 474 SSMP-EHDQVSWNSII 488
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 159/372 (42%), Gaps = 47/372 (12%)
Query: 54 NLPYARRIFDHLHSPNIYLYTSSTFSLFR--------RMLCNSNPTT-TRPNNFIYPHVL 104
+L YAR++F+ + + N L R ++ + N P +++ +L
Sbjct: 258 SLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVI--LL 315
Query: 105 KSCHESRSTGAVHAQIVKTGFEQYP-IVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVS 163
S E V +K G E + ++ T LVD + G+GN
Sbjct: 316 SSFPEYSLAEEVG---LKKGREVHGHVITTGLVDF----MVGIGNG-------------- 354
Query: 164 FTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAA 223
+++ YA+ G + A ++F M ++D SWN++I G QNG F E + ++ M
Sbjct: 355 ---LVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSM----- 406
Query: 224 ERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCG 283
R + P TL+ +LS+C +LG+ IHG K ++ +SN+L+ +Y + G
Sbjct: 407 -RRHDI-LPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETG 464
Query: 284 NLALARKVFEMNPDKGLTSWNSMINCFALHGQS-EGAIAVFEQMVECGGDVRPDGVTFVG 342
L RK+F P+ SWNS+I A +S A+ F G + + +TF
Sbjct: 465 YLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKL--NRITFSS 522
Query: 343 LLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSME 402
+L+A + E G + + I + L+ G+ G D ++ M+
Sbjct: 523 VLSAVSSLSFGELG-KQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAER 581
Query: 403 PDEVVWGSLFNG 414
D V W S+ +G
Sbjct: 582 RDNVTWNSMISG 593
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 71/137 (51%), Gaps = 11/137 (8%)
Query: 91 TTTRPNNFIYPHVLKSCHESRST----GAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGL 146
T R ++F+Y VL S S +T VHA V+ E +V +ALVD YS+ G L
Sbjct: 613 TGQRLDSFMYATVL-SAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSK-CGRL 670
Query: 147 GNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMP-----ERDVPSWNALIAG 201
A + F+ M RN S+ +MISGYAR G + ALKLF+ M D ++ +++
Sbjct: 671 DYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSA 730
Query: 202 CTQNGFFSEGIRLFREM 218
C+ G EG + F M
Sbjct: 731 CSHAGLLEEGFKHFESM 747
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 129/342 (37%), Gaps = 76/342 (22%)
Query: 96 NNFIYPHVLKSCHESRSTG-----AVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAE 150
N + + VL++C E S G +H + K + +V L+ Y + +G +G A
Sbjct: 101 NQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYAL 160
Query: 151 KVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSE 210
F ++ +N V SWN++I+ +Q G
Sbjct: 161 CAFGDIEVKNSV-------------------------------SWNSIISVYSQAGDQRS 189
Query: 211 GIRLFREMVALAAERGYRCNKPNPVTL-VCALSACGHTSM-LQLGKWIHGYVYKNDFFVD 268
R+F M Y ++P T +AC T ++L + I + K+ D
Sbjct: 190 AFRIFSSM-------QYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTD 242
Query: 269 SFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVE 328
F+ + LV + K G+L+ ARKVF + + N ++ E A +F M
Sbjct: 243 LFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM-N 301
Query: 329 CGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYG----------- 377
DV P+ ++V LL++ L E E G++ E +G
Sbjct: 302 SMIDVSPE--SYVILLSSFPEYSLAE-----------EVGLKKGREVHGHVITTGLVDFM 348
Query: 378 -----CLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNG 414
LV++ + G +A V M+ + D V W S+ G
Sbjct: 349 VGIGNGLVNMYAKCGSIADARRVFYFMT-DKDSVSWNSMITG 389
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 5/121 (4%)
Query: 233 NPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVF 292
N V L S GH ++ H +YKN D ++ N+L++ Y + G+ ARKVF
Sbjct: 3 NCVPLSFVQSCVGHRGA---ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVF 59
Query: 293 EMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGL 352
+ P + SW +++ ++ +G+ + A+ MV+ G + + FV +L AC G
Sbjct: 60 DEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEG--IFSNQYAFVSVLRACQEIGS 117
Query: 353 V 353
V
Sbjct: 118 V 118
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 229 bits (583), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 120/310 (38%), Positives = 181/310 (58%), Gaps = 11/310 (3%)
Query: 166 AMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAER 225
++I Y ++GD+ A ++F E + +V +WNA+IA + I LF MV+
Sbjct: 473 SLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVS----- 526
Query: 226 GYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNL 285
KP+ +TLV L AC +T L+ G+ IH Y+ + + ++ +S +L+DMY KCG+L
Sbjct: 527 --ENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHL 584
Query: 286 ALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLN 345
+R++F+ K WN MI+ + +HG E AIA+F+QM E DV+P G TF+ LL+
Sbjct: 585 EKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEE--SDVKPTGPTFLALLS 642
Query: 346 ACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDE 405
ACTH GLVEQG F M +Y ++P ++HY CLVDLL R+G +EA V M PD
Sbjct: 643 ACTHAGLVEQGKKLFLKM-HQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDG 701
Query: 406 VVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRIL 465
V+WG+L + C +G ++ A++ + DP N GY IMLAN+Y GKW+E ++
Sbjct: 702 VIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMM 761
Query: 466 KQQKSYKVPG 475
++ K G
Sbjct: 762 RESGVGKRAG 771
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 180/419 (42%), Gaps = 57/419 (13%)
Query: 15 KSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVR-FCALTLSNLPYARRIFDHLHSPNIYLY 73
+S L L++ A + T G + F A KL+ + + NL + R+F + +I+L+
Sbjct: 36 QSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNL--SSRVFHLVTRRDIFLW 93
Query: 74 TSSTFSLFR-----RMLC---NSNPTTTRPNNFIYPHVLKSCHES---RSTGAVHAQIVK 122
S + F R LC + + P++F P V+ +C E VH ++K
Sbjct: 94 NSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLK 153
Query: 123 TGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALK 182
G FD RN + + Y++ G + A
Sbjct: 154 HGG---------------------------FD----RNTAVGASFVYFYSKCGFLQDACL 182
Query: 183 LFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALS 242
+FDEMP+RDV +W A+I+G QNG G+ +M G +KPNP TL C
Sbjct: 183 VFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKM----HSAGSDVDKPNPRTLECGFQ 238
Query: 243 ACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTS 302
AC + L+ G+ +HG+ KN F+ +S+ Y K GN + A F D+ + S
Sbjct: 239 ACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFS 298
Query: 303 WNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEM 362
W S+I A G E + +F +M G + PDGV L+N LV QG ++
Sbjct: 299 WTSIIASLARSGDMEESFDMFWEMQNKG--MHPDGVVISCLINELGKMMLVPQGKAFHGF 356
Query: 363 MTRE-YGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGR 420
+ R + ++ + L+ + + A ++ +S E ++ W ++ G YG+
Sbjct: 357 VIRHCFSLDSTV--CNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKG---YGK 410
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 131/260 (50%), Gaps = 13/260 (5%)
Query: 166 AMISGYARVGDVDSALKLFDEMPER-DVPSWNALIAGCTQNGFFSEGIRLFREMVALAAE 224
+++S Y + + A KLF + E + +WN ++ G + + I LFR++ L E
Sbjct: 371 SLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIE 430
Query: 225 RGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGN 284
+ + +S+C H + LGK +H YV K + + NSL+D+YGK G+
Sbjct: 431 -------IDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGD 483
Query: 285 LALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLL 344
L +A ++F D + +WN+MI + QSE AIA+F++MV + +P +T V LL
Sbjct: 484 LTVAWRMF-CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVS--ENFKPSSITLVTLL 540
Query: 345 NACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPD 404
AC + G +E+G +T E E + L+D+ + G +++ E+ + + D
Sbjct: 541 MACVNTGSLERGQMIHRYIT-ETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGN-QKD 598
Query: 405 EVVWGSLFNGCKVYGRTDLA 424
V W + +G ++G + A
Sbjct: 599 AVCWNVMISGYGMHGDVESA 618
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 159/383 (41%), Gaps = 77/383 (20%)
Query: 11 TILGKSNHLNHLKQLQAHLTTLGHAHTDFY--------AFKLVRFCALTLSNLPYARRIF 62
+LGKS H +K ++ ++ D Y A+++ FC + + + I
Sbjct: 449 VLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRM--FCEADTNVITWNAMIA 506
Query: 63 DHLHSPNIYLYTSSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRST---GAVHAQ 119
++H + +LF RM+ +P++ +L +C + S +H
Sbjct: 507 SYVHCEQ----SEKAIALFDRMV----SENFKPSSITLVTLLMACVNTGSLERGQMIHRY 558
Query: 120 IVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDS 179
I +T E + AL+D Y++ G L + ++FD +++ V + MISGY GDV+S
Sbjct: 559 ITETEHEMNLSLSAALIDMYAK-CGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVES 617
Query: 180 ALKLFDEMPERDV----PSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPV 235
A+ LFD+M E DV P++ AL++ CT G +G +LF +M KPN
Sbjct: 618 AIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDV-------KPNLK 670
Query: 236 TLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKV---F 292
C LVD+ + GNL A
Sbjct: 671 HYSC-----------------------------------LVDLLSRSGNLEEAESTVMSM 695
Query: 293 EMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGL 352
+PD + W ++++ HG+ E I + E+ V D + DG ++ L N + G
Sbjct: 696 PFSPDGVI--WGTLLSSCMTHGEFEMGIRMAERAV--ASDPQNDGY-YIMLANMYSAAGK 750
Query: 353 VEQGCSYFEMMTREYGIEPQIEH 375
E+ EMM RE G+ + H
Sbjct: 751 WEEAERAREMM-RESGVGKRAGH 772
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 229 bits (583), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 124/343 (36%), Positives = 183/343 (53%), Gaps = 13/343 (3%)
Query: 171 YARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCN 230
YA GD+ +A LF + RD+ WNA+I+G Q G EG+ ++ +M R N
Sbjct: 153 YALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDM---------RQN 203
Query: 231 K--PNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALA 288
+ P+ T AC L+ GK H + K + + ++LVDMY KC + +
Sbjct: 204 RIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDG 263
Query: 289 RKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACT 348
+VF+ + + +W S+I+ + HG+ + FE+M E G RP+ VTF+ +L AC
Sbjct: 264 HRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEG--CRPNPVTFLVVLTACN 321
Query: 349 HGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVW 408
HGGLV++G +F M R+YGIEP+ +HY +VD LGRAGR EA E V + VW
Sbjct: 322 HGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVW 381
Query: 409 GSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQ 468
GSL C+++G L E AA K LE+DP NGG ++ AN Y G + V R ++
Sbjct: 382 GSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENA 441
Query: 469 KSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESLIGF 511
K PG S IE+ +VH+F D S +E++Y + + F
Sbjct: 442 GVKKDPGYSQIELQGEVHRFMKDDTSHRLSEKIYKKVHEMTSF 484
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 131/310 (42%), Gaps = 63/310 (20%)
Query: 23 KQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSPNIYLYTSSTFSLFR 82
K++ A + +G A ++ KL+ AL+ +L A +F L ++ + + +
Sbjct: 128 KRIHAQMFVVGFALNEYLKVKLLILYALS-GDLQTAGILFRSLKIRDLIPWNAMISGYVQ 186
Query: 83 RML--------CNSNPTTTRPNNFIYPHVLKSC-------HESRSTGAVHAQIVKTGFEQ 127
+ L + P+ + + V ++C H R+ HA ++K +
Sbjct: 187 KGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRA----HAVMIKRCIKS 242
Query: 128 YPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEM 187
IV +ALVD Y + + +VFD++ RNV+++T++ISGY G V LK F++M
Sbjct: 243 NIIVDSALVDMYFK-CSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKM 301
Query: 188 PERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHT 247
E GC +PNPVT + L+AC H
Sbjct: 302 KEE----------GC----------------------------RPNPVTFLVVLTACNHG 323
Query: 248 SMLQLGKWIHGYVYKNDFFVDSFISN--SLVDMYGKCGNLALARKVFEMNPDKGLTS-WN 304
++ G W H Y K D+ ++ + ++VD G+ G L A + +P K W
Sbjct: 324 GLVDKG-WEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWG 382
Query: 305 SMINCFALHG 314
S++ +HG
Sbjct: 383 SLLGACRIHG 392
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 79/188 (42%), Gaps = 4/188 (2%)
Query: 234 PVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFE 293
P T L C GK IH ++ F ++ ++ L+ +Y G+L A +F
Sbjct: 108 PETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFR 167
Query: 294 MNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLV 353
+ L WN+MI+ + G + + ++ M + + PD TF + AC+ +
Sbjct: 168 SLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQ--NRIVPDQYTFASVFRACSALDRL 225
Query: 354 EQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFN 413
E G +M + I+ I LVD+ + F + V +S + + W SL +
Sbjct: 226 EHGKRAHAVMIKR-CIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTR-NVITWTSLIS 283
Query: 414 GCKVYGRT 421
G +G+
Sbjct: 284 GYGYHGKV 291
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 228 bits (582), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 140/469 (29%), Positives = 226/469 (48%), Gaps = 55/469 (11%)
Query: 55 LPYARRIFDHLHSPNIYLYTS------------STFSLFRRMLCNSNPTTTRPNNFIYPH 102
L AR +F + ++ + S S + RM+ TRP+
Sbjct: 259 LEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEG----TRPSQTTLTS 314
Query: 103 VLKSCHESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVV 162
+L +C SRS +H + + Y I D Y
Sbjct: 315 ILMAC--SRSRNLLHGKFI----HGYVIRSVVNADIYVN--------------------- 347
Query: 163 SFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALA 222
++I Y + G+ + A +F + + SWN +I+ G + + + ++ +MV++
Sbjct: 348 --CSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVG 405
Query: 223 AERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKC 282
KP+ VT L AC + L+ GK IH + ++ D + ++L+DMY KC
Sbjct: 406 V-------KPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKC 458
Query: 283 GNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVG 342
GN A ++F P K + SW MI+ + HGQ A+ F++M + G ++PDGVT +
Sbjct: 459 GNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFG--LKPDGVTLLA 516
Query: 343 LLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSME 402
+L+AC H GL+++G +F M +YGIEP IEHY C++D+LGRAGR EA E+++
Sbjct: 517 VLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPET 576
Query: 403 PDEV-VWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNV 461
D + +LF+ C ++ L + A+ L+E P + ++L N+Y WD R V
Sbjct: 577 SDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRV 636
Query: 462 WRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESLIG 510
+K+ K PGCSWIE+ D+V FF+ D+S +AE +Y L L G
Sbjct: 637 RLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECLALLSG 685
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 166/357 (46%), Gaps = 73/357 (20%)
Query: 16 SNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLH-SPNIYLYT 74
+ L +K + + TLG D K + T + AR +F++ ++Y++
Sbjct: 17 TKSLRRIKLVHQRILTLG-LRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWN 75
Query: 75 S------------STFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTGA------- 115
S T +F+R+L N + P++F +P+V+K+ GA
Sbjct: 76 SLMSGYSKNSMFHDTLEVFKRLL---NCSICVPDSFTFPNVIKA------YGALGREFLG 126
Query: 116 --VHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYAR 173
+H +VK+G+ V D VV ++++ YA+
Sbjct: 127 RMIHTLVVKSGY--------------------------VCD------VVVASSLVGMYAK 154
Query: 174 VGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPN 233
+++L++FDEMPERDV SWN +I+ Q+G + + LF M + E PN
Sbjct: 155 FNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFE-------PN 207
Query: 234 PVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFE 293
V+L A+SAC L+ GK IH K F +D +++++LVDMYGKC L +AR+VF+
Sbjct: 208 SVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQ 267
Query: 294 MNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHG 350
P K L +WNSMI + G S+ + + +M+ G RP T +L AC+
Sbjct: 268 KMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEG--TRPSQTTLTSILMACSRS 322
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 158/354 (44%), Gaps = 17/354 (4%)
Query: 109 ESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGL---GGLGNAEKVFDEMRERNVVSFT 165
E+ + ++ +GFE + T + + SR L G K + E + +
Sbjct: 188 EAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNS 247
Query: 166 AMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAER 225
A++ Y + ++ A ++F +MP + + +WN++I G G + + M+
Sbjct: 248 ALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEG--- 304
Query: 226 GYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNL 285
+P+ TL L AC + L GK+IHGYV ++ D +++ SL+D+Y KCG
Sbjct: 305 ----TRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEA 360
Query: 286 ALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLN 345
LA VF SWN MI+ + G A+ V++QMV G V+PD VTF +L
Sbjct: 361 NLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVG--VKPDVVTFTSVLP 418
Query: 346 ACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDE 405
AC+ +E+G + E +E L+D+ + G EA + + + D
Sbjct: 419 ACSQLAALEKG-KQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIP-KKDV 476
Query: 406 VVWGSLFNGCKVYG--RTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDE 457
V W + + +G R L +F + + P +G + + + G G DE
Sbjct: 477 VSWTVMISAYGSHGQPREALYQFDEMQKFGLKP-DGVTLLAVLSACGHAGLIDE 529
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 127/257 (49%), Gaps = 11/257 (4%)
Query: 159 RNVVSFTAMISGYARVGDVDSALKLFDEMPER-DVPSWNALIAGCTQNGFFSEGIRLFRE 217
R+VV ++I+ Y D SA +F+ R DV WN+L++G ++N F + + +F+
Sbjct: 37 RDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKR 96
Query: 218 MVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVD 277
++ + C P+ T + A G LG+ IH V K+ + D +++SLV
Sbjct: 97 LLNCSI-----C-VPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVG 150
Query: 278 MYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDG 337
MY K + +VF+ P++ + SWN++I+CF G++E A+ +F +M G + P+
Sbjct: 151 MYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFE--PNS 208
Query: 338 VTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVR 397
V+ ++AC+ +E+G ++ G E LVD+ G+ + A EV +
Sbjct: 209 VSLTVAISACSRLLWLERGKEIHRKCVKK-GFELDEYVNSALVDMYGKCDCLEVAREVFQ 267
Query: 398 GMSMEPDEVVWGSLFNG 414
M V W S+ G
Sbjct: 268 KMP-RKSLVAWNSMIKG 283
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 138/437 (31%), Positives = 215/437 (49%), Gaps = 54/437 (12%)
Query: 82 RRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSR 141
R L N + + ++ + V K C + +H+ VK+G V TAL+ YS
Sbjct: 261 RATLLNICSSLYKSSDLVPNEVSKCCLQ------LHSLTVKSGLVTQTEVATALIKVYSE 314
Query: 142 GLGGLGNAEKVFDEMRE-RNVVSFTAMISGYARVGDVDSALKLFDEM-PERDVPSWNALI 199
L + K+F EM R++V++ +I+ +A V D + A+ LF ++ E+ P W
Sbjct: 315 MLEDYTDCYKLFMEMSHCRDIVAWNGIITAFA-VYDPERAIHLFGQLRQEKLSPDW---- 369
Query: 200 AGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGY 259
T L AC + IH
Sbjct: 370 -----------------------------------YTFSSVLKACAGLVTARHALSIHAQ 394
Query: 260 VYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGA 319
V K F D+ ++NSL+ Y KCG+L L +VF+ + + SWNSM+ ++LHGQ +
Sbjct: 395 VIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSI 454
Query: 320 IAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCL 379
+ VF++M D+ PD TF+ LL+AC+H G VE+G F M + PQ+ HY C+
Sbjct: 455 LPVFQKM-----DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACV 509
Query: 380 VDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLE-IDPHN 438
+D+L RA RF EA EV++ M M+PD VVW +L C+ +G T L + AA KL E ++P N
Sbjct: 510 IDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTN 569
Query: 439 GGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKA 498
I ++N+Y G ++E + ++ + K P SW EI ++VH+F S + P
Sbjct: 570 SMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDK 629
Query: 499 EELYSVLESLIGFGNEV 515
E +Y L+ LI + E+
Sbjct: 630 EAVYRELKRLISWLKEM 646
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 125/274 (45%), Gaps = 33/274 (12%)
Query: 159 RNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREM 218
+NV+ +I+ YA+ G++ A ++FD MPER+V SW ALI G Q G EG LF M
Sbjct: 94 QNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM 153
Query: 219 VALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDM 278
++ C PN TL L++C + + GK +HG K +++N+++ M
Sbjct: 154 LS-------HCF-PNEFTLSSVLTSCRY----EPGKQVHGLALKLGLHCSIYVANAVISM 201
Query: 279 YGKCGNLALARK---VFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRP 335
YG+C + A A + VFE K L +WNSMI F + AI VF +M
Sbjct: 202 YGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRM-------HS 254
Query: 336 DGVTF--VGLLNACTH--------GGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGR 385
DGV F LLN C+ V + C +T + G+ Q E L+ +
Sbjct: 255 DGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSE 314
Query: 386 A-GRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVY 418
+ + ++ MS D V W + VY
Sbjct: 315 MLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVY 348
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 120/351 (34%), Positives = 196/351 (55%), Gaps = 8/351 (2%)
Query: 158 ERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFRE 217
E ++V +++ Y R G + + MP R++ +WN LI G QNG + L++
Sbjct: 123 ELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYK- 181
Query: 218 MVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVD 277
M+ ++ R PN +T V LS+C ++ G+ IH K + +SL+
Sbjct: 182 MMKISGCR------PNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLIS 235
Query: 278 MYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDG 337
MY KCG L A K F D+ W+SMI+ + HGQ + AI +F M E ++ +
Sbjct: 236 MYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAE-QTNMEINE 294
Query: 338 VTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVR 397
V F+ LL AC+H GL ++G F+MM +YG +P ++HY C+VDLLGRAG D+A ++R
Sbjct: 295 VAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIR 354
Query: 398 GMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDE 457
M ++ D V+W +L + C ++ ++A+ K++L+IDP++ ++LANV+ +W +
Sbjct: 355 SMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRD 414
Query: 458 VRNVWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESL 508
V V + ++ + K G SW E +VHQF D+S K++E+YS L+ L
Sbjct: 415 VSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKEL 465
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/286 (31%), Positives = 145/286 (50%), Gaps = 12/286 (4%)
Query: 139 YSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNAL 198
YS+ LG +A V+ MR++N +S +I+GY R GD+ +A K+FDEMP+R + +WNA+
Sbjct: 4 YSK-LGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAM 62
Query: 199 IAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHG 258
IAG Q F EG+ LFREM L G+ P+ TL S + +G+ IHG
Sbjct: 63 IAGLIQFEFNEEGLSLFREMHGL----GF---SPDEYTLGSVFSGSAGLRSVSIGQQIHG 115
Query: 259 YVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEG 318
Y K +D +++SL MY + G L V P + L +WN++I A +G E
Sbjct: 116 YTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPET 175
Query: 319 AIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGC 378
+ +++ M G RP+ +TFV +L++C+ + QG + G +
Sbjct: 176 VLYLYKMMKISG--CRPNKITFVTVLSSCSDLAIRGQG-QQIHAEAIKIGASSVVAVVSS 232
Query: 379 LVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLA 424
L+ + + G +A + E DEV+W S+ + +G+ D A
Sbjct: 233 LISMYSKCGCLGDAAKAFSEREDE-DEVMWSSMISAYGFHGQGDEA 277
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 110/261 (42%), Gaps = 54/261 (20%)
Query: 94 RPNNFIYPHVLKSCHESRSTGA---VHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAE 150
RPN + VL SC + G +HA+ +K G V ++L+ YS+ G LG+A
Sbjct: 189 RPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSK-CGCLGDAA 247
Query: 151 KVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNA-----LIAGCTQN 205
K F E + + V +++MIS Y G D A++LF+ M E+ N L+ C+ +
Sbjct: 248 KAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHS 307
Query: 206 GFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDF 265
G +G+ LF MV + G+ KP C
Sbjct: 308 GLKDKGLELFDMMV---EKYGF---KPGLKHYTC-------------------------- 335
Query: 266 FVDSFISNSLVDMYGKCGNLALARKVFEMNPDK-GLTSWNSMINCFALHGQSEGAIAVFE 324
+VD+ G+ G L A + P K + W ++++ +H +E A VF+
Sbjct: 336 ---------VVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFK 386
Query: 325 QMVECGGDVRPDGVTFVGLLN 345
++++ + D +V L N
Sbjct: 387 EILQIDPN---DSACYVLLAN 404
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 128/329 (38%), Positives = 184/329 (55%), Gaps = 21/329 (6%)
Query: 165 TAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAG-CTQ----NGFFSEGIRLFREMV 219
T ++ YA+ GD+ A K+FDEMPER +WNA+I G C+ N + + LFR
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFS 210
Query: 220 ALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFF--VDSFISNSLVD 277
+ G R P T+VC LSA T +L++G +HGY+ K F VD FI +LVD
Sbjct: 211 CCGS--GVR---PTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVD 265
Query: 278 MYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDG 337
MY KCG L A VFE+ K + +W SM AL+G+ + +M E G ++P+
Sbjct: 266 MYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESG--IKPNE 323
Query: 338 VTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVR 397
+TF LL+A H GLVE+G F+ M +G+ P IEHYGC+VDLLG+AGR EA + +
Sbjct: 324 ITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFIL 383
Query: 398 GMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYG-------IMLANVYG 450
M ++PD ++ SL N C +YG T + E K LLEI+ + + L+NV
Sbjct: 384 AMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLA 443
Query: 451 ELGKWDEVRNVWRILKQQKSYKVPGCSWI 479
GKW EV + + +K+++ PG S++
Sbjct: 444 HKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 112/229 (48%), Gaps = 13/229 (5%)
Query: 250 LQLGKWIHGYVYKNDFFVDS-FISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMIN 308
L++G+ +HG V K F +S I +L+ Y K G+L ARKVF+ P++ +WN+MI
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIG 186
Query: 309 CFALHG-----QSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMM 363
+ H + A+ +F + CG VRP T V +L+A + GL+E G S
Sbjct: 187 GYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIG-SLVHGY 245
Query: 364 TREYGIEPQIEHY--GCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRT 421
+ G P+++ + LVD+ + G + A V M ++ + W S+ G + GR
Sbjct: 246 IEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVK-NVFTWTSMATGLALNGRG 304
Query: 422 DLAEFAAKKLLE--IDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQ 468
+ ++ E I P+ + +L+ Y +G +E +++ +K +
Sbjct: 305 NETPNLLNRMAESGIKPNEITFTSLLS-AYRHIGLVEEGIELFKSMKTR 352
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 83/191 (43%), Gaps = 29/191 (15%)
Query: 54 NLPYARRIFDHLHSPNIYLYTS-----------------STFSLFRRMLCNSNPTTTRPN 96
+L YAR++FD + + + LFRR C + RP
Sbjct: 162 DLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCG--SGVRPT 219
Query: 97 NFIYPHVLKSCHES---RSTGAVHAQIVKTGF--EQYPIVQTALVDSYSRGLGGLGNAEK 151
+ VL + ++ VH I K GF E + TALVD YS+ G L NA
Sbjct: 220 DTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSK-CGCLNNAFS 278
Query: 152 VFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVP----SWNALIAGCTQNGF 207
VF+ M+ +NV ++T+M +G A G + L + M E + ++ +L++ G
Sbjct: 279 VFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGL 338
Query: 208 FSEGIRLFREM 218
EGI LF+ M
Sbjct: 339 VEEGIELFKSM 349
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 79/164 (48%), Gaps = 15/164 (9%)
Query: 158 ERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFRE 217
E +V TA++ Y++ G +++A +F+ M ++V +W ++ G NG +E L
Sbjct: 254 EVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNR 313
Query: 218 MVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISN--SL 275
M AE G KPN +T LSA H +++ G + + K F V I + +
Sbjct: 314 M----AESGI---KPNEITFTSLLSAYRHIGLVEEGIELFKSM-KTRFGVTPVIEHYGCI 365
Query: 276 VDMYGKCGNLALARK---VFEMNPDKGLTSWNSMINCFALHGQS 316
VD+ GK G + A + + PD L S+ N +++G++
Sbjct: 366 VDLLGKAGRIQEAYQFILAMPIKPDAIL--LRSLCNACSIYGET 407
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 136/437 (31%), Positives = 221/437 (50%), Gaps = 54/437 (12%)
Query: 116 VHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVG 175
V ++ FE ++ + ++D Y++ G + +A+KVFD E++++ + +++ YA G
Sbjct: 397 VQCYCIRHSFESDIVLASTVMDMYAK-CGSIVDAKKVFDSTVEKDLILWNTLLAAYAESG 455
Query: 176 DVDSALKLFDEMPERDVP---------------------------------------SWN 196
AL+LF M VP SW
Sbjct: 456 LSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWT 515
Query: 197 ALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWI 256
++ G QNG E I R+M E G R PN ++ ALSAC H + L +G+ I
Sbjct: 516 TMMNGMVQNGCSEEAILFLRKM----QESGLR---PNAFSITVALSACAHLASLHIGRTI 568
Query: 257 HGYVYKNDFFVDSFIS--NSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHG 314
HGY+ +N S +S SLVDMY KCG++ A KVF L N+MI+ +AL+G
Sbjct: 569 HGYIIRN-LQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYG 627
Query: 315 QSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIE 374
+ AIA++ + G ++PD +T +L+AC H G + Q F + + ++P +E
Sbjct: 628 NLKEAIALYRSLEGVG--LKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLE 685
Query: 375 HYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEI 434
HYG +VDLL AG ++A+ ++ M +PD + SL C +T+L ++ ++KLLE
Sbjct: 686 HYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLES 745
Query: 435 DPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVPGCSWIEI--DDQVHQFFSLD 492
+P N G + ++N Y G WDEV + ++K + K PGCSWI+I ++ VH F + D
Sbjct: 746 EPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVAND 805
Query: 493 QSSPKAEELYSVLESLI 509
++ + E+ +L L+
Sbjct: 806 KTHTRINEIQMMLALLL 822
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 120/473 (25%), Positives = 203/473 (42%), Gaps = 65/473 (13%)
Query: 23 KQLQAHLTTLG--HAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSPNIYLYTSSTFSL 80
KQ+ A + G +A ++ KLV F A L A +F L N++ + +
Sbjct: 90 KQIHARILKNGDFYARNEYIETKLVIFYA-KCDALEIAEVLFSKLRVRNVFSWAAIIGVK 148
Query: 81 FRRMLCNSN--------PTTTRPNNFIYPHVLKSCHE---SRSTGAVHAQIVKTGFEQYP 129
R LC P+NF+ P+V K+C SR VH +VK+G E
Sbjct: 149 CRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCV 208
Query: 130 IVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPE 189
V ++L D Y + G +D A K+FDE+P+
Sbjct: 209 FVASSLADMY--------------------------------GKCGVLDDASKVFDEIPD 236
Query: 190 RDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSM 249
R+ +WNAL+ G QNG E IRLF +M E P VT+ LSA +
Sbjct: 237 RNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVE-------PTRVTVSTCLSASANMGG 289
Query: 250 LQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINC 309
++ GK H N +D+ + SL++ Y K G + A VF+ +K + +WN +I+
Sbjct: 290 VEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISG 349
Query: 310 FALHGQSEGAIAVFEQM-VECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYG 368
+ G E AI + + M +E ++ D VT L++A ++ G + +
Sbjct: 350 YVQQGLVEDAIYMCQLMRLE---KLKYDCVTLATLMSAAARTENLKLG-KEVQCYCIRHS 405
Query: 369 IEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTD--LAEF 426
E I ++D+ + G +A +V ++E D ++W +L G + L F
Sbjct: 406 FESDIVLASTVMDMYAKCGSIVDAKKVFDS-TVEKDLILWNTLLAAYAESGLSGEALRLF 464
Query: 427 AAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVPG-CSW 478
+L + P+ + +++ ++ G+ DE ++++ L+ Q S +P SW
Sbjct: 465 YGMQLEGVPPNVITWNLIILSLLRN-GQVDEAKDMF--LQMQSSGIIPNLISW 514
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 172/383 (44%), Gaps = 66/383 (17%)
Query: 50 LTLSNLPYARRIFDHLHSPNIYLYTSSTFSLFRR--------MLCNSNPTTTRPNNFIYP 101
++S+ P ++ + HSP+ Y SL + ++ + R IY
Sbjct: 15 FSVSSKPSSKHHDEQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYG 74
Query: 102 HVLKSCHESR--STGA-VHAQIVKTG--FEQYPIVQTALVDSYSRGLGGLGNAEKVFDEM 156
+L+ C R STG +HA+I+K G + + ++T LV Y++ L AE +F ++
Sbjct: 75 EILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAK-CDALEIAEVLFSKL 133
Query: 157 RERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFR 216
R RNV S+ A+I R+G + AL F EM E ++ N ++
Sbjct: 134 RVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVV----------------- 176
Query: 217 EMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLV 276
PN VC ACG + G+ +HGYV K+ F+++SL
Sbjct: 177 ---------------PN----VC--KACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLA 215
Query: 277 DMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPD 336
DMYGKCG L A KVF+ PD+ +WN+++ + +G++E AI +F M + G V P
Sbjct: 216 DMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQG--VEPT 273
Query: 337 GVTFVGLLNACTHGGLVEQG-----CSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDE 391
VT L+A + G VE+G + M + + + ++ C V L+ E
Sbjct: 274 RVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLI-------E 326
Query: 392 AMEVVRGMSMEPDEVVWGSLFNG 414
E+V E D V W + +G
Sbjct: 327 YAEMVFDRMFEKDVVTWNLIISG 349
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 120/332 (36%), Positives = 194/332 (58%), Gaps = 8/332 (2%)
Query: 149 AEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFF 208
A FD M ++N VS+ MISGY ++GDV SA +LF M ++D ++A+IA TQNG
Sbjct: 251 ARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKP 310
Query: 209 SEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVD 268
+ ++LF +M+ ER +P+ +TL +SA G W+ Y+ ++ +D
Sbjct: 311 KDALKLFAQML----ERNSYI-QPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKID 365
Query: 269 SFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVE 328
+S SL+D+Y K G+ A A K+F K S+++MI ++G + A ++F M+E
Sbjct: 366 DLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIE 425
Query: 329 CGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGR 388
+ P+ VTF GLL+A +H GLV++G F M +++ +EP +HYG +VD+LGRAGR
Sbjct: 426 --KKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSM-KDHNLEPSADHYGIMVDMLGRAGR 482
Query: 389 FDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANV 448
+EA E+++ M M+P+ VWG+L ++ + E A ++++ GY LA +
Sbjct: 483 LEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMI 542
Query: 449 YGELGKWDEVRNVWRILKQQKSYKVPGCSWIE 480
Y +G+WD+ R V +K++K K GCSW+E
Sbjct: 543 YSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 164/329 (49%), Gaps = 23/329 (6%)
Query: 95 PNNFIYPHVLKSCHESRST---GAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEK 151
P++ VL++C + + +HAQ +K G VQT LV YSR LG + A+K
Sbjct: 102 PSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSR-LGYIELAKK 160
Query: 152 VFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEG 211
FD++ E+N VS+ +++ GY G++D A ++FD++PE+D SWN +I+ + G
Sbjct: 161 AFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNA 220
Query: 212 IRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGK-WIHGYVYKNDFFVDSF 270
LF M +P + + + ++L + + KN S+
Sbjct: 221 CSLFSAMPL-----------KSPASWNILIGGYVNCREMKLARTYFDAMPQKNGV---SW 266
Query: 271 ISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECG 330
I +++ Y K G++ A ++F + K +++MI C+ +G+ + A+ +F QM+E
Sbjct: 267 I--TMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERN 324
Query: 331 GDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFD 390
++PD +T +++A + G G ++ E E+GI+ L+DL + G F
Sbjct: 325 SYIQPDEITLSSVVSANSQLGNTSFG-TWVESYITEHGIKIDDLLSTSLIDLYMKGGDFA 383
Query: 391 EAMEVVRGMSMEPDEVVWGSLFNGCKVYG 419
+A ++ ++ + D V + ++ GC + G
Sbjct: 384 KAFKMFSNLN-KKDTVSYSAMIMGCGING 411
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 91/211 (43%), Gaps = 28/211 (13%)
Query: 153 FDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGI 212
F + RN+V++ I LK F+ D SW L+ +Q+
Sbjct: 45 FTKEFSRNIVTYVKRI------------LKGFNG---HDSFSWGCLVRFLSQH------- 82
Query: 213 RLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFIS 272
R F+E V + + P+ + L ACG + GK IH KN ++
Sbjct: 83 RKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQ 142
Query: 273 NSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGD 332
LV +Y + G + LA+K F+ +K SWNS+++ + G+ + A VF+++ E
Sbjct: 143 TGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPE---- 198
Query: 333 VRPDGVTFVGLLNACTHGGLVEQGCSYFEMM 363
D V++ ++++ G + CS F M
Sbjct: 199 --KDAVSWNLIISSYAKKGDMGNACSLFSAM 227
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 136/408 (33%), Positives = 207/408 (50%), Gaps = 30/408 (7%)
Query: 13 LGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSPNIYL 72
L ++ + LKQ+ + + +L+ + + YA +F+ L SP+ +
Sbjct: 27 LRTCSNFSQLKQIHTKIIKHNLTNDQLLVRQLISVSS-SFGETQYASLVFNQLQSPSTFT 85
Query: 73 YTSSTFSLFRRMLCNSNPT-------------TTRPNNFIYPHVLKSCHESRST---GAV 116
+ + R + N P ++ + F +P V+K+C S S V
Sbjct: 86 WNL----MIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQV 141
Query: 117 HAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGD 176
H +K GF Q L+D Y + G + KVFD+M R++VS+T M+ G
Sbjct: 142 HGLAIKAGFFNDVFFQNTLMDLYFK-CGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQ 200
Query: 177 VDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVT 236
+DSA +F++MP R+V SW A+I +N E +LFR M KPN T
Sbjct: 201 LDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDV-------KPNEFT 253
Query: 237 LVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNP 296
+V L A L +G+W+H Y +KN F +D F+ +L+DMY KCG+L ARKVF++
Sbjct: 254 IVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQ 313
Query: 297 DKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQG 356
K L +WNSMI +HG E A+++FE+M E V PD +TFVG+L+AC + G V+ G
Sbjct: 314 GKSLATWNSMITSLGVHGCGEEALSLFEEMEEEAS-VEPDAITFVGVLSACANTGNVKDG 372
Query: 357 CSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPD 404
YF M + YGI P EH C++ LL +A ++A +V M +PD
Sbjct: 373 LRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPD 420
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 226 bits (575), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 206/419 (49%), Gaps = 43/419 (10%)
Query: 96 NNFIYPHVLKSC---HESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKV 152
++F++ VLK+C E +HA + K G E V T LVD Y
Sbjct: 284 DSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFY------------- 330
Query: 153 FDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGI 212
+ +SA + F E+ E + SW+A+I+G Q F E +
Sbjct: 331 -------------------IKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAV 371
Query: 213 RLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFIS 272
+ F+ + R + N T AC + +G +H K +
Sbjct: 372 KTFKSL------RSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGE 425
Query: 273 NSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGD 332
++L+ MY KCG L A +VFE + + +W + I+ A +G + A+ +FE+MV CG
Sbjct: 426 SALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCG-- 483
Query: 333 VRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEA 392
++P+ VTF+ +L AC+H GLVEQG + M R+Y + P I+HY C++D+ R+G DEA
Sbjct: 484 MKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEA 543
Query: 393 MEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGEL 452
++ ++ M EPD + W +GC + +L E A ++L ++DP + ++ N+Y
Sbjct: 544 LKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWA 603
Query: 453 GKWDEVRNVWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESLIGF 511
GKW+E + +++ ++ K CSWI+ ++H+F D+ P+ +E+Y L+ GF
Sbjct: 604 GKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEFDGF 662
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 145/354 (40%), Gaps = 50/354 (14%)
Query: 64 HLHSPNIYLYTSSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRST--GAVHAQIV 121
HL S + + + F + M + +++ Y + ++C E RS G + +
Sbjct: 54 HLVSLSKHRKLNEAFEFLQEM----DKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRM 109
Query: 122 KTGFEQYPIV-QTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSA 180
+ G E ++ Q ++ Y L +A+K+FDEM E N VS T MIS YA G +D A
Sbjct: 110 RMGIENPSVLLQNCVLQMYCE-CRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKA 168
Query: 181 LKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCA 240
+ LF +G + G +KP
Sbjct: 169 VGLF--------------------SGMLASG------------------DKPPSSMYTTL 190
Query: 241 LSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGL 300
L + + L G+ IH +V + ++ I +V+MY KCG L A++VF+ K
Sbjct: 191 LKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKP 250
Query: 301 TSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYF 360
+ ++ + G++ A+ +F +V G V D F +L AC + G
Sbjct: 251 VACTGLMVGYTQAGRARDALKLFVDLVTEG--VEWDSFVFSVVLKACASLEELNLG-KQI 307
Query: 361 EMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNG 414
+ G+E ++ LVD + F+ A + + EP++V W ++ +G
Sbjct: 308 HACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIR-EPNDVSWSAIISG 360
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 110/266 (41%), Gaps = 22/266 (8%)
Query: 165 TAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAE 224
T +++ Y + G + A ++FD+M + + L+ G TQ G + ++LF ++V E
Sbjct: 223 TGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVE 282
Query: 225 RGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGN 284
+ L AC L LGK IH V K + + LVD Y KC +
Sbjct: 283 W-------DSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSS 335
Query: 285 LALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLL 344
A + F+ + SW+++I+ + Q E A+ F+ + + + T+ +
Sbjct: 336 FESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASIL-NSFTYTSIF 394
Query: 345 NACT------HGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRG 398
AC+ GG V ++ +YG L+ + + G D+A EV
Sbjct: 395 QACSVLADCNIGGQVHADAIKRSLIGSQYG-------ESALITMYSKCGCLDDANEVFES 447
Query: 399 MSMEPDEVVWGSLFNGCKVYGRTDLA 424
M PD V W + +G YG A
Sbjct: 448 MD-NPDIVAWTAFISGHAYYGNASEA 472
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 147/376 (39%), Gaps = 71/376 (18%)
Query: 9 VLTILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSP 68
VL LN KQ+ A + LG LV F + S+ A R F + P
Sbjct: 291 VLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDF-YIKCSSFESACRAFQEIREP 349
Query: 69 NIYLYTS-----STFSLFRRMLCNSNPTTTRP----NNFIYPHVLKSCH---ESRSTGAV 116
N +++ S F + ++ N+F Y + ++C + G V
Sbjct: 350 NDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQV 409
Query: 117 HAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGD 176
HA +K ++AL+ YS+ G L +A +VF+ M ++V++TA ISG+A G+
Sbjct: 410 HADAIKRSLIGSQYGESALITMYSK-CGCLDDANEVFESMDNPDIVAWTAFISGHAYYGN 468
Query: 177 VDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVT 236
AL+LF++M S G+ KPN VT
Sbjct: 469 ASEALRLFEKM--------------------VSCGM------------------KPNSVT 490
Query: 237 LVCALSACGHTSMLQLGKWIHGYV---YKNDFFVDSFISNSLVDMYGKCGNLALARKVFE 293
+ L+AC H +++ GK + Y +D + + ++D+Y + G L A K +
Sbjct: 491 FIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHY--DCMIDIYARSGLLDEALKFMK 548
Query: 294 MNP-DKGLTSWNSMIN-CFALHGQSEGAIAVFEQMVECGGDVR----PDGVTFVGLLNAC 347
P + SW ++ C+ G IA G ++R D +V N
Sbjct: 549 NMPFEPDAMSWKCFLSGCWTHKNLELGEIA--------GEELRQLDPEDTAGYVLPFNLY 600
Query: 348 THGGLVEQGCSYFEMM 363
T G E+ ++M
Sbjct: 601 TWAGKWEEAAEMMKLM 616
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 225 bits (574), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 144/439 (32%), Positives = 234/439 (53%), Gaps = 30/439 (6%)
Query: 58 ARRIFDHLHSPNIYLYTSSTFSLFRRMLCNSNPT---------TTRPNNFIYPHVLKSCH 108
A R+F+ + ++ Y + L + N P+ + PN+ + + + +C
Sbjct: 183 AARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACA 242
Query: 109 ESRSTG---AVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRE-RNVVSF 164
+ +H ++K F+ +V TAL+D YS+ +A VF E+++ RN++S+
Sbjct: 243 SLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSK-CRCWKSAYIVFTELKDTRNLISW 301
Query: 165 TAMISGYARVGDVDSALKLFDEMPER----DVPSWNALIAGCTQNGFFSEGIRLFREMVA 220
++ISG G ++A++LF+++ D +WN+LI+G +Q G E + F M++
Sbjct: 302 NSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLS 361
Query: 221 LAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYG 280
+ +C L LSAC L+ GK IHG+V K D F+ SL+DMY
Sbjct: 362 VVMVPSLKC-------LTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYM 414
Query: 281 KCGNLALARKVFE-MNPD-KGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGV 338
KCG + AR++F+ P K WN MI+ + HG+ E AI +FE + E V P
Sbjct: 415 KCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLRE--EKVEPSLA 472
Query: 339 TFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRG 398
TF +L+AC+H G VE+G F +M EYG +P EH GC++DLLGR+GR EA EV+
Sbjct: 473 TFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQ 532
Query: 399 MSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEV 458
MS V SL C+ + L E AA KL E++P N ++L+++Y L +W++V
Sbjct: 533 MSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALERWEDV 591
Query: 459 RNVWRILKQQKSYKVPGCS 477
++ +++ Q++ K+PG S
Sbjct: 592 ESIRQVIDQKQLVKLPGLS 610
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 162/321 (50%), Gaps = 24/321 (7%)
Query: 158 ERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFRE 217
E V T+++S Y+R G+ A ++F+++P + V ++NA I+G +NG + +F
Sbjct: 161 EMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNL 220
Query: 218 MVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVD 277
M R + +PN VT V A++AC LQ G+ +HG V K +F ++ + +L+D
Sbjct: 221 M------RKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALID 274
Query: 278 MYGKCGNLALARKVF-EMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPD 336
MY KC A VF E+ + L SWNS+I+ ++GQ E A+ +FE++ G ++PD
Sbjct: 275 MYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEG--LKPD 332
Query: 337 GVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAG---RFDEAM 393
T+ L++ + G V + +FE M + P ++ CL LL
Sbjct: 333 SATWNSLISGFSQLGKVIEAFKFFERMLSVVMV-PSLK---CLTSLLSACSDIWTLKNGK 388
Query: 394 EV---VRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKL--LEIDPHNGGYGIMLANV 448
E+ V + E D V SL + +Y + L+ +A + E P + + ++ +
Sbjct: 389 EIHGHVIKAAAERDIFVLTSLID---MYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISG 445
Query: 449 YGELGKWDEVRNVWRILKQQK 469
YG+ G+ + ++ +L+++K
Sbjct: 446 YGKHGECESAIEIFELLREEK 466
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 168/366 (45%), Gaps = 52/366 (14%)
Query: 95 PNNFIYPHVLKSCHESRST---GAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEK 151
PN F +P +LKSC + +HAQ+VKTGF VD
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGF---------FVD-------------- 65
Query: 152 VFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEG 211
V + TA++S Y +V V ALK+ DEMPER + S NA ++G +NGF +
Sbjct: 66 ---------VFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDA 116
Query: 212 IRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFI 271
R+F + A + G N VT+ L CG ++ G +H K+ F ++ ++
Sbjct: 117 FRMFGD--ARVSGSGM-----NSVTVASVLGGCGD---IEGGMQLHCLAMKSGFEMEVYV 166
Query: 272 SNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGG 331
SLV MY +CG LA ++FE P K + ++N+ I+ +G +VF M +
Sbjct: 167 GTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSS 226
Query: 332 DVRPDGVTFVGLLNACTHGGLVEQGCSYFEM-MTREYGIEPQIEHYGCLVDLLGRAGRFD 390
+ P+ VTFV + AC ++ G + M +E+ E + L+D+ + +
Sbjct: 227 E-EPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGT--ALIDMYSKCRCWK 283
Query: 391 EAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLE--IDPHNGGYGIMLANV 448
A V + + + W S+ +G + G+ + A +KL + P + + +++
Sbjct: 284 SAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISG- 342
Query: 449 YGELGK 454
+ +LGK
Sbjct: 343 FSQLGK 348
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 71/165 (43%), Gaps = 16/165 (9%)
Query: 230 NKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALAR 289
+ PN T L +C + G+ +H V K FFVD F + +LV MY K + A
Sbjct: 27 HSPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDAL 86
Query: 290 KVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDG-----VTFVGLL 344
KV + P++G+ S N+ ++ +G A +F GD R G VT +L
Sbjct: 87 KVLDEMPERGIASVNAAVSGLLENGFCRDAFRMF-------GDARVSGSGMNSVTVASVL 139
Query: 345 NACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRF 389
C G +E G + + G E ++ LV + R G +
Sbjct: 140 GGC---GDIEGGMQ-LHCLAMKSGFEMEVYVGTSLVSMYSRCGEW 180
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 113/315 (35%), Positives = 183/315 (58%), Gaps = 9/315 (2%)
Query: 165 TAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAE 224
+A+++ Y++ G + A +++D +PE D S ++LI+G +Q+G +G LFR+MV
Sbjct: 590 SALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVM---- 645
Query: 225 RGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGN 284
G+ + + L A + LG +H Y+ K + + +SL+ MY K G+
Sbjct: 646 SGFTMDS---FAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGS 702
Query: 285 LALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLL 344
+ K F L +W ++I +A HG++ A+ V+ M E G +PD VTFVG+L
Sbjct: 703 IDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKG--FKPDKVTFVGVL 760
Query: 345 NACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPD 404
+AC+HGGLVE+ + M ++YGIEP+ HY C+VD LGR+GR EA + M ++PD
Sbjct: 761 SACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPD 820
Query: 405 EVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRI 464
+VWG+L CK++G +L + AAKK +E++P + G I L+N+ E+G+WDEV ++
Sbjct: 821 ALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKL 880
Query: 465 LKQQKSYKVPGCSWI 479
+K K PG S +
Sbjct: 881 MKGTGVQKEPGWSSV 895
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 166/378 (43%), Gaps = 67/378 (17%)
Query: 58 ARRIFDHLHSPNIYLYTS------------STFSLFRRMLCNSNPTTTRPNNFIYPHVLK 105
A ++F S N+Y + + + F LF M +P+++ Y VL
Sbjct: 204 AYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQ----KPDSYTYSSVLA 259
Query: 106 SC---HESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVV 162
+C + R V A+++K G AE VF
Sbjct: 260 ACASLEKLRFGKVVQARVIKCG------------------------AEDVF--------- 286
Query: 163 SFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALA 222
TA++ YA+ G + A+++F +P V SW +++G T++ + +F+EM
Sbjct: 287 VCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSG 346
Query: 223 AERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKC 282
E N T+ +SACG SM+ +H +V+K+ F++DS ++ +L+ MY K
Sbjct: 347 VE-------INNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKS 399
Query: 283 GNLALARKVFE-MNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFV 341
G++ L+ +VFE ++ + N MI F+ + AI +F +M++ G +R D +
Sbjct: 400 GDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEG--LRTDEFSVC 457
Query: 342 GLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSM 401
LL+ L +Q Y T + G+ + L L + G +E+ ++ +G+
Sbjct: 458 SLLSVLDCLNLGKQVHGY----TLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPF 513
Query: 402 EPDEVVWGSLFNGCKVYG 419
+ D W S+ +G YG
Sbjct: 514 K-DNACWASMISGFNEYG 530
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 149/332 (44%), Gaps = 46/332 (13%)
Query: 165 TAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAE 224
+++ + Y++ G ++ + KLF +P +D W ++I+G + G+ E I LF EM+ +
Sbjct: 489 SSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEML----D 544
Query: 225 RGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGN 284
G P+ TL L+ C L GK IHGY + + ++LV+MY KCG+
Sbjct: 545 DG---TSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGS 601
Query: 285 LALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLL 344
L LAR+V++ P+ S +S+I+ ++ HG + +F MV G + D +L
Sbjct: 602 LKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTM--DSFAISSIL 659
Query: 345 NAC----------------THGGLVEQ---GCSYFEMMTREYGIE-----------PQIE 374
A T GL + G S M ++ I+ P +
Sbjct: 660 KAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLI 719
Query: 375 HYGCLVDLLGRAGRFDEAMEVVRGMS---MEPDEVVWGSLFNGCKVYGRTDLAEFAAKKL 431
+ L+ + G+ +EA++V M +PD+V + + + C G + + F +
Sbjct: 720 AWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSM 779
Query: 432 LE---IDPHNGGYGIMLANVYGELGKWDEVRN 460
++ I+P N Y + + + G G+ E +
Sbjct: 780 VKDYGIEPENRHY-VCMVDALGRSGRLREAES 810
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 125/256 (48%), Gaps = 15/256 (5%)
Query: 165 TAMISGYARVGDVDSALKLFDEMPERDVPSW-NALIAGCTQNGFFSEGIRLFREMVALAA 223
A+IS Y++ GD+D + ++F+++ + + N +I +Q+ + IRLF M+
Sbjct: 390 AALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRML---- 445
Query: 224 ERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCG 283
+ G R ++ + +L+ L L LGK +HGY K+ +D + +SL +Y KCG
Sbjct: 446 QEGLRTDEFSVCSLLSVLDC------LNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCG 499
Query: 284 NLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGL 343
+L + K+F+ P K W SMI+ F +G AI +F +M++ G PD T +
Sbjct: 500 SLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDG--TSPDESTLAAV 557
Query: 344 LNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEP 403
L C+ + +G T GI+ ++ LV++ + G A +V + E
Sbjct: 558 LTVCSSHPSLPRG-KEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP-EL 615
Query: 404 DEVVWGSLFNGCKVYG 419
D V SL +G +G
Sbjct: 616 DPVSCSSLISGYSQHG 631
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 141/347 (40%), Gaps = 53/347 (15%)
Query: 18 HLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSP-----NIYL 72
+L K LQAHL D + K + ++ A ++FD + P NI +
Sbjct: 63 NLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMI 122
Query: 73 YTSSTFSLFR---RMLCNSNPTTTRPNNFIYPHVLKSCHESRS---TGAVHAQIVKTGFE 126
LF R + N Y V+ +C ++ + V +K G+
Sbjct: 123 SGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYF 182
Query: 127 QYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDE 186
Y +V++AL+D +S+ L + A K+F +
Sbjct: 183 FYEVVESALIDVFSKNL--------------------------------RFEDAYKVFRD 210
Query: 187 MPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGH 246
+V WN +IAG +N + LF EM G++ KP+ T L+AC
Sbjct: 211 SLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCV-----GFQ--KPDSYTYSSVLAACAS 263
Query: 247 TSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSM 306
L+ GK + V K D F+ ++VD+Y KCG++A A +VF P+ + SW M
Sbjct: 264 LEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVM 322
Query: 307 INCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLV 353
++ + + A+ +F++M G V + T +++AC +V
Sbjct: 323 LSGYTKSNDAFSALEIFKEMRHSG--VEINNCTVTSVISACGRPSMV 367
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 131/277 (47%), Gaps = 22/277 (7%)
Query: 166 AMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAER 225
+++S Y+ G + A KLFD +P+ DV S N +I+G Q+ F E +R F +M L E
Sbjct: 89 SLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFE- 147
Query: 226 GYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNL 285
N ++ +SAC + + + K +F + ++L+D++ K
Sbjct: 148 ------ANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRF 201
Query: 286 ALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAI-AVFEQMVECGGDVRPDGVTFVGLL 344
A KVF + + WN++I AL Q+ GA+ +F +M C G +PD T+ +L
Sbjct: 202 EDAYKVFRDSLSANVYCWNTII-AGALRNQNYGAVFDLFHEM--CVGFQKPDSYTYSSVL 258
Query: 345 NACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGC--LVDLLGRAGRFDEAMEVVRGMSME 402
AC + G + + G E + + C +VDL + G EAMEV +
Sbjct: 259 AACASLEKLRFG-KVVQARVIKCGAE---DVFVCTAIVDLYAKCGHMAEAMEVFSRIP-N 313
Query: 403 PDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNG 439
P V W + +G Y +++ A F+A ++ + H+G
Sbjct: 314 PSVVSWTVMLSG---YTKSNDA-FSALEIFKEMRHSG 346
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 122/301 (40%), Gaps = 78/301 (25%)
Query: 54 NLPYARRIFDHLHSPNIYLYTSST--------------FSLFRRMLCNSNPTTTRPNNFI 99
+L AR+++D L P + + S+ F LFR M+ + ++F
Sbjct: 601 SLKLARQVYDRL--PELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTM----DSFA 654
Query: 100 YPHVLKSC---HESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEM 156
+LK+ ES VHA I K G P V ++L+ YS+ G + + K F ++
Sbjct: 655 ISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSK-FGSIDDCCKAFSQI 713
Query: 157 RERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFR 216
+++++TA+I+ YA+ G + AL++++ M E+ GF
Sbjct: 714 NGPDLIAWTALIASYAQHGKANEALQVYNLMKEK---------------GF--------- 749
Query: 217 EMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNS-- 274
KP+ VT V LSAC H +++ Y + N D I
Sbjct: 750 --------------KPDKVTFVGVLSACSHGGLVE-----ESYFHLNSMVKDYGIEPENR 790
Query: 275 ----LVDMYGKCGNLALARKVF---EMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMV 327
+VD G+ G L A + PD + W +++ +HG+ E ++ +
Sbjct: 791 HYVCMVDALGRSGRLREAESFINNMHIKPDALV--WGTLLAACKIHGEVELGKVAAKKAI 848
Query: 328 E 328
E
Sbjct: 849 E 849
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 152/499 (30%), Positives = 238/499 (47%), Gaps = 63/499 (12%)
Query: 1 MKPNLNEQV--LTILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYA 58
+ PNL+ V LG++ L K + + T +G ++ ++ A + + YA
Sbjct: 201 LSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKS-KCIIYA 259
Query: 59 RRIFDHLHSPNIYLYTS------------STFSLFRRMLCNSNPTTTRPNNFIYPHVLKS 106
RR+FD N +++ +F +ML N N P +L
Sbjct: 260 RRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTP--VAIGLILMG 317
Query: 107 CHE--SRSTG-AVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVS 163
C S G VH VK GF + D + ++S
Sbjct: 318 CARFGDLSGGRCVHCYAVKAGF--------------------------ILDLTVQNTIIS 351
Query: 164 FTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAA 223
F YA+ G + A + F E+ +DV S+N+LI GC N E RLF EM
Sbjct: 352 F------YAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEM----R 401
Query: 224 ERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCG 283
G R P+ TL+ L+AC H + L G HGY + + V++ I N+L+DMY KCG
Sbjct: 402 TSGIR---PDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCG 458
Query: 284 NLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGL 343
L +A++VF+ + + SWN+M+ F +HG + A+++F M E G V PD VT + +
Sbjct: 459 KLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETG--VNPDEVTLLAI 516
Query: 344 LNACTHGGLVEQGCSYFEMMTR-EYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSME 402
L+AC+H GLV++G F M+R ++ + P+I+HY C+ DLL RAG DEA + V M E
Sbjct: 517 LSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFE 576
Query: 403 PDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVW 462
PD V G+L + C Y +L +KK+ + ++L+N Y +W++ +
Sbjct: 577 PDIRVLGTLLSACWTYKNAELGNEVSKKMQSLGETTESL-VLLSNTYSAAERWEDAARIR 635
Query: 463 RILKQQKSYKVPGCSWIEI 481
I K++ K PG SW+++
Sbjct: 636 MIQKKRGLLKTPGYSWVDV 654
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 167/383 (43%), Gaps = 63/383 (16%)
Query: 58 ARRIFDHLHSPNI---------YLYTSSTFS-----LFRRMLCNSNPTTTRPNNFIYPHV 103
AR +FD + P I Y S+ F+ L+ +ML NS RP + YP V
Sbjct: 54 ARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKML-NSG---VRPTKYTYPFV 109
Query: 104 LKSCHESRSTG---AVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERN 160
LK+C R+ +H+ + + F V TALVD Y
Sbjct: 110 LKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFY--------------------- 148
Query: 161 VVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVA 220
A+ G+++ A+K+FDEMP+RD+ +WNA+I+G + + ++ I LF +M
Sbjct: 149 -----------AKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDM-- 195
Query: 221 LAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYG 280
R PN T+V A G L+ GK +HGY + F D + ++D+Y
Sbjct: 196 ----RRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYA 251
Query: 281 KCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTF 340
K + AR+VF+++ K +W++MI + + + A VF QM+ V
Sbjct: 252 KSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAI 311
Query: 341 VGLLNACTHGGLVEQG-CSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGM 399
+L C G + G C + + + ++ +++ ++ + G +A +
Sbjct: 312 GLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQN--TIISFYAKYGSLCDAFRQFSEI 369
Query: 400 SMEPDEVVWGSLFNGCKVYGRTD 422
++ D + + SL GC V R +
Sbjct: 370 GLK-DVISYNSLITGCVVNCRPE 391
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 115/246 (46%), Gaps = 12/246 (4%)
Query: 171 YARVGDVDSALKLFDEMPERDVP--SWNALIAGCTQNGFFSEGIRLFREMVALAAERGYR 228
YA +V+ A +FDE+P + +W+ +I N F + + L+ +M+ G R
Sbjct: 45 YASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKML----NSGVR 100
Query: 229 CNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALA 288
P T L AC + GK IH +V +DF D ++ +LVD Y KCG L +A
Sbjct: 101 ---PTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMA 157
Query: 289 RKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACT 348
KVF+ P + + +WN+MI+ F+LH I +F M G + P+ T VG+ A
Sbjct: 158 IKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDG-LSPNLSTIVGMFPALG 216
Query: 349 HGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVW 408
G + +G + TR G + ++D+ ++ A V + + +EV W
Sbjct: 217 RAGALREGKAVHGYCTR-MGFSNDLVVKTGILDVYAKSKCIIYARRVF-DLDFKKNEVTW 274
Query: 409 GSLFNG 414
++ G
Sbjct: 275 SAMIGG 280
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 27/187 (14%)
Query: 241 LSACGHTSMLQLGKWIHGYVYKNDFFVDS-FISNSLVDMYGKCGNLALARKVFEMNPDKG 299
L C + L LG+ IH ++ K + S + +L +Y C + LAR VF+ P
Sbjct: 6 LETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPR 65
Query: 300 LT--SWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQG- 356
+ +W+ MI +A + +E A+ ++ +M+ G VRP T+ +L AC ++ G
Sbjct: 66 INPIAWDLMIRAYASNDFAEKALDLYYKMLNSG--VRPTKYTYPFVLKACAGLRAIDDGK 123
Query: 357 -------CSYFEMMTREYGIEPQIEHYGC--LVDLLGRAGRFDEAMEVVRGMSMEPDEVV 407
CS F + Y C LVD + G + A++V M + D V
Sbjct: 124 LIHSHVNCSDF-----------ATDMYVCTALVDFYAKCGELEMAIKVFDEMP-KRDMVA 171
Query: 408 WGSLFNG 414
W ++ +G
Sbjct: 172 WNAMISG 178
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 131/439 (29%), Positives = 218/439 (49%), Gaps = 48/439 (10%)
Query: 73 YTSSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTG---AVHAQIVKTGFEQYP 129
+ + LF RM PN F +L C + +G +H +VK GF+
Sbjct: 328 FCNEAVDLFIRM----REAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDI 383
Query: 130 IVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPE 189
V AL+D Y A+ +D+A+KLF E+
Sbjct: 384 YVSNALIDVY--------------------------------AKCEKMDTAVKLFAELSS 411
Query: 190 RDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSM 249
++ SWN +I G G + +FRE AL + VT AL AC +
Sbjct: 412 KNEVSWNTVIVGYENLGEGGKAFSMFRE--ALRNQVSV-----TEVTFSSALGACASLAS 464
Query: 250 LQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINC 309
+ LG +HG K + +SNSL+DMY KCG++ A+ VF + SWN++I+
Sbjct: 465 MDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISG 524
Query: 310 FALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGI 369
++ HG A+ + + M + D +P+G+TF+G+L+ C++ GL++QG FE M R++GI
Sbjct: 525 YSTHGLGRQALRILDIMKD--RDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGI 582
Query: 370 EPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAK 429
EP +EHY C+V LLGR+G+ D+AM+++ G+ EP ++W ++ + + A +A+
Sbjct: 583 EPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAE 642
Query: 430 KLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVPGCSWIEIDDQVHQFF 489
++L+I+P + ++++N+Y +W V ++ + +K+ K PG SWIE VH F
Sbjct: 643 EILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFS 702
Query: 490 SLDQSSPKAEELYSVLESL 508
P + + +LE L
Sbjct: 703 VGLSDHPDMKLINGMLEWL 721
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 101/409 (24%), Positives = 167/409 (40%), Gaps = 61/409 (14%)
Query: 25 LQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSPNIYLYT--------SS 76
L + + LG+ F L+ ++ ++ AR +F+ + +I ++ +
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVC-GSVDSARTVFEGILCKDIVVWAGIVSCYVENG 226
Query: 77 TFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTGA------VHAQIVKTGFEQYPI 130
F ++L PNN+ + LK+ S GA VH QI+KT + P
Sbjct: 227 YFEDSLKLLSCMRMAGFMPNNYTFDTALKA---SIGLGAFDFAKGVHGQILKTCYVLDPR 283
Query: 131 VQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPER 190
V L+ Y++ +GD+ A K+F+EMP+
Sbjct: 284 VGVGLLQLYTQ--------------------------------LGDMSDAFKVFNEMPKN 311
Query: 191 DVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSML 250
DV W+ +IA QNGF +E + LF M PN TL L+ C
Sbjct: 312 DVVPWSFMIARFCQNGFCNEAVDLFIRMREAFV-------VPNEFTLSSILNGCAIGKCS 364
Query: 251 QLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCF 310
LG+ +HG V K F +D ++SN+L+D+Y KC + A K+F K SWN++I +
Sbjct: 365 GLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGY 424
Query: 311 ALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIE 370
G+ A ++F + + V VTF L AC ++ G + + +
Sbjct: 425 ENLGEGGKAFSMFREALR--NQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAK 482
Query: 371 PQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYG 419
++ L+D+ + G A V M D W +L +G +G
Sbjct: 483 -KVAVSNSLIDMYAKCGDIKFAQSVFNEME-TIDVASWNALISGYSTHG 529
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 106/244 (43%), Gaps = 19/244 (7%)
Query: 167 MISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERG 226
+++ Y + G AL LFDEMPER+ S+ L G RL RE L
Sbjct: 90 LLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGHEL----- 144
Query: 227 YRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLA 286
NP L ++ W+H + K + ++F+ +L++ Y CG++
Sbjct: 145 ------NPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVD 198
Query: 287 LARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNA 346
AR VFE K + W +++C+ +G E ++ + M G P+ TF L A
Sbjct: 199 SARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAG--FMPNNYTFDTALKA 256
Query: 347 CTHGGLVE--QGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPD 404
G + +G + +++ Y ++P++ G L+ L + G +A +V M + D
Sbjct: 257 SIGLGAFDFAKGV-HGQILKTCYVLDPRV-GVG-LLQLYTQLGDMSDAFKVFNEMP-KND 312
Query: 405 EVVW 408
V W
Sbjct: 313 VVPW 316
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 221 bits (564), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 120/342 (35%), Positives = 185/342 (54%), Gaps = 7/342 (2%)
Query: 167 MISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERG 226
+I Y + + S+ +F EM ++ SW +L+A QN + L+ E
Sbjct: 250 LIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVE-- 307
Query: 227 YRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLA 286
+ + LSAC + L+LG+ IH + K F+ ++LVDMYGKCG +
Sbjct: 308 -----TSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIE 362
Query: 287 LARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNA 346
+ + F+ P+K L + NS+I +A GQ + A+A+FE+M G P+ +TFV LL+A
Sbjct: 363 DSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSA 422
Query: 347 CTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEV 406
C+ G VE G F+ M YGIEP EHY C+VD+LGRAG + A E ++ M ++P
Sbjct: 423 CSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTIS 482
Query: 407 VWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILK 466
VWG+L N C+++G+ L AA+ L ++DP + G ++L+N + G+W E V LK
Sbjct: 483 VWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELK 542
Query: 467 QQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESL 508
K G SWI + +QVH F + D+S +E+ + L L
Sbjct: 543 GVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKL 584
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 108/245 (44%), Gaps = 11/245 (4%)
Query: 167 MISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERG 226
+I+ Y+++ +SA + P R+V SW +LI+G QNG FS + F EM
Sbjct: 48 LINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGV--- 104
Query: 227 YRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLA 286
PN T CA A + GK IH K +D F+ S DMY K
Sbjct: 105 ----VPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRD 160
Query: 287 LARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNA 346
ARK+F+ P++ L +WN+ I+ G+ AI F + G P+ +TF LNA
Sbjct: 161 DARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDG--HPNSITFCAFLNA 218
Query: 347 CTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEV 406
C+ + G ++ R G + + L+D G+ + + + M + + V
Sbjct: 219 CSDWLHLNLGMQLHGLVLRS-GFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTK-NAV 276
Query: 407 VWGSL 411
W SL
Sbjct: 277 SWCSL 281
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 112/254 (44%), Gaps = 11/254 (4%)
Query: 171 YARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCN 230
Y + D A KLFDE+PER++ +WNA I+ +G E I F E +
Sbjct: 153 YCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGH------ 206
Query: 231 KPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARK 290
PN +T L+AC L LG +HG V ++ F D + N L+D YGKC + +
Sbjct: 207 -PNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEI 265
Query: 291 VFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHG 350
+F K SW S++ + + + E A ++ + + V +L+AC
Sbjct: 266 IFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRK--DIVETSDFMISSVLSACAGM 323
Query: 351 GLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGS 410
+E G S + +E I LVD+ G+ G +++ + M E + V S
Sbjct: 324 AGLELGRSIHAHAVKAC-VERTIFVGSALVDMYGKCGCIEDSEQAFDEMP-EKNLVTRNS 381
Query: 411 LFNGCKVYGRTDLA 424
L G G+ D+A
Sbjct: 382 LIGGYAHQGQVDMA 395
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 119/261 (45%), Gaps = 34/261 (13%)
Query: 88 SNPTTTRPNNFIYPHVLKSCHESRST---GAVHAQIVKTGFEQYPIVQTALVDSYSRGLG 144
S ++F+ VL +C ++HA VK E+ V +ALVD Y + G
Sbjct: 301 SRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGK-CG 359
Query: 145 GLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDV-PSWN-----AL 198
+ ++E+ FDEM E+N+V+ ++I GYA G VD AL LF+EM R P+ N +L
Sbjct: 360 CIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSL 419
Query: 199 IAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHG 258
++ C++ G G+++F M R +P C + G M++
Sbjct: 420 LSACSRAGAVENGMKIFDSM------RSTYGIEPGAEHYSCIVDMLGRAGMVE-----RA 468
Query: 259 YVYKNDFFVDSFIS-----NSLVDMYGK--CGNLALARKVFEMNPDKGLTSWNSMI--NC 309
Y + + IS + M+GK G LA A +F+++P S N ++ N
Sbjct: 469 YEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLA-AENLFKLDPKD---SGNHVLLSNT 524
Query: 310 FALHGQSEGAIAVFEQMVECG 330
FA G+ A V E++ G
Sbjct: 525 FAAAGRWAEANTVREELKGVG 545
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 157/569 (27%), Positives = 263/569 (46%), Gaps = 102/569 (17%)
Query: 9 VLTILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSP 68
+L ++ + + L KQ+Q L T D K+V F + Y+ I LHS
Sbjct: 9 LLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVI---LHSI 65
Query: 69 NIYLYTSSTFSLFRRMLCNSNPTTT------------RPNNFIYPHVLKS---------- 106
L + S +L P T P+ F +P V K+
Sbjct: 66 RSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREG 125
Query: 107 ----------------------------CHESRSTGAVHAQI----------VKTGFEQY 128
C ESR+ V ++ + TGF +
Sbjct: 126 KQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRT 185
Query: 129 PIVQTALVDSYSR------------------GLGGLGNAEKVFDEMRER-NVVSF---TA 166
+ + AL D++S+ +G L + + + +R +++S A
Sbjct: 186 GLYKEAL-DTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNA 244
Query: 167 MISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERG 226
+I Y + + A+++F E+ ++D SWN++I+G E I LF M +
Sbjct: 245 LIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSG--- 301
Query: 227 YRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLA 286
KP+ L LSAC + G+W+H Y+ D+ I ++VDMY KCG +
Sbjct: 302 ---IKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIE 358
Query: 287 LARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNA 346
A ++F K + +WN+++ A+HG ++ FE+MV+ G +P+ VTF+ LNA
Sbjct: 359 TALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLG--FKPNLVTFLAALNA 416
Query: 347 CTHGGLVEQGCSYF-EMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDE 405
C H GLV++G YF +M +REY + P++EHYGC++DLL RAG DEA+E+V+ M ++PD
Sbjct: 417 CCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDV 476
Query: 406 VVWGSLFNGCKVYGR-TDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRI 464
+ G++ + CK G +L + L+I+ + G ++L+N++ +WD+V + R+
Sbjct: 477 RICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRL 536
Query: 465 LKQQKSYKVPGCSWIEIDDQVHQFFSLDQ 493
+K + KVPG S+IE +F +LDQ
Sbjct: 537 MKVKGISKVPGSSYIE------KFMTLDQ 559
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 219 bits (557), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 114/333 (34%), Positives = 197/333 (59%), Gaps = 17/333 (5%)
Query: 165 TAMISGYARVGDVDSALKLFDEMPER-DVPSWNALIAGCTQNGFFSEGIRLFREMVALAA 223
T+++ Y+ VGDVD A ++FDE PE+ ++ W A+I+ T+N E I LF+ M A
Sbjct: 104 TSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKI 163
Query: 224 ERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKND--FFVDSFISNSLVDMYGK 281
E + V + ALSAC +Q+G+ I+ K +D + NSL++MY K
Sbjct: 164 E-------LDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVK 216
Query: 282 CGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQM--VECGGD--VRPDG 337
G ARK+F+ + K +T++ SMI +AL+GQ++ ++ +F++M ++ D + P+
Sbjct: 217 SGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPND 276
Query: 338 VTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVR 397
VTF+G+L AC+H GLVE+G +F+ M +Y ++P+ H+GC+VDL R+G +A E +
Sbjct: 277 VTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFIN 336
Query: 398 GMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDE 457
M ++P+ V+W +L C ++G +L E +++ E+D + G + L+N+Y G WDE
Sbjct: 337 QMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDE 396
Query: 458 VRNVWRILKQQKSYKVPGCSWIEIDDQVHQFFS 490
++ + + ++PG SWIE+ +++F S
Sbjct: 397 KS---KMRDRVRKRRMPGKSWIELGSIINEFVS 426
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 6/203 (2%)
Query: 235 VTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEM 294
V +S+ S L G+ IH V K F I SLV Y G++ AR+VF+
Sbjct: 67 VLFAIKVSSAQKASSLD-GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDE 125
Query: 295 NPDK-GLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLV 353
P+K + W +MI+ + + S AI +F++M + DGV L+AC G V
Sbjct: 126 TPEKQNIVLWTAMISAYTENENSVEAIELFKRME--AEKIELDGVIVTVALSACADLGAV 183
Query: 354 EQGCS-YFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLF 412
+ G Y + R+ + + L+++ ++G ++A ++ SM D + S+
Sbjct: 184 QMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLF-DESMRKDVTTYTSMI 242
Query: 413 NGCKVYGRTDLAEFAAKKLLEID 435
G + G+ + KK+ ID
Sbjct: 243 FGYALNGQAQESLELFKKMKTID 265
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 135/327 (41%), Gaps = 54/327 (16%)
Query: 23 KQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHL-HSPNIYLYTS------ 75
+Q+ A + LG LV F + ++ ++ YAR++FD NI L+T+
Sbjct: 85 RQIHALVRKLGFNAVIQIQTSLVGFYS-SVGDVDYARQVFDETPEKQNIVLWTAMISAYT 143
Query: 76 ------STFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTGAVH--AQIVKTGFEQ 127
LF+RM + I L +C + GAV +I ++
Sbjct: 144 ENENSVEAIELFKRM----EAEKIELDGVIVTVALSACAD---LGAVQMGEEIYSRSIKR 196
Query: 128 YP------IVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSAL 181
++ +L++ Y + G A K+FDE ++V ++T+MI GYA G +L
Sbjct: 197 KRRLAMDLTLRNSLLNMYVKS-GETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESL 255
Query: 182 KLFDEMPERDVP----------SWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNK 231
+LF +M D ++ ++ C+ +G EG R F+ M+ Y K
Sbjct: 256 ELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIM-----DYNL-K 309
Query: 232 PNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALA--- 288
P C + + L K H ++ + ++ I +L+ GN+ L
Sbjct: 310 PREAHFGCMVDLFCRSGHL---KDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEV 366
Query: 289 -RKVFEMNPDKGLTSWNSMINCFALHG 314
R++FE++ D + + ++ N +A G
Sbjct: 367 QRRIFELDRDH-VGDYVALSNIYASKG 392
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 219 bits (557), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 119/326 (36%), Positives = 171/326 (52%), Gaps = 13/326 (3%)
Query: 160 NVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMV 219
+++ T++IS YA+ VD ++F + W+A+IAGC QN S+ + LF+ M
Sbjct: 353 DIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMR 412
Query: 220 ALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMY 279
E PN TL L A + L+ IH Y+ K F + LV +Y
Sbjct: 413 REDVE-------PNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVY 465
Query: 280 GKCGNLALARKVF----EMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRP 335
KCG L A K+F E + K + W ++I+ + +HG A+ VF +MV G V P
Sbjct: 466 SKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSG--VTP 523
Query: 336 DGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEV 395
+ +TF LNAC+H GLVE+G + F M Y + HY C+VDLLGRAGR DEA +
Sbjct: 524 NEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNL 583
Query: 396 VRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKW 455
+ + EP VWG+L C + L E AA KL E++P N G ++LAN+Y LG+W
Sbjct: 584 ITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRW 643
Query: 456 DEVRNVWRILKQQKSYKVPGCSWIEI 481
++ V +++ K PG S IEI
Sbjct: 644 KDMEKVRSMMENVGLRKKPGHSTIEI 669
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 173/424 (40%), Gaps = 62/424 (14%)
Query: 7 EQVLTILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLH 66
+ +L + ++ K L H+ T G + V + ++ YAR++F+ +
Sbjct: 19 QSLLNHFAATQSISKTKALHCHVITGGRVSGHILSTLSVTYA--LCGHITYARKLFEEMP 76
Query: 67 SPNIYLYT------------SSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTG 114
++ Y S+F RM+ S P+ + YP V K+ E +S
Sbjct: 77 QSSLLSYNIVIRMYVREGLYHDAISVFIRMV--SEGVKCVPDGYTYPFVAKAAGELKSMK 134
Query: 115 ---AVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGY 171
VH +I+++ F + VQ AL ++ Y
Sbjct: 135 LGLVVHGRILRSWFGRDKYVQNAL--------------------------------LAMY 162
Query: 172 ARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNK 231
G V+ A +FD M RDV SWN +I+G +NG+ ++ + +F MV + + +
Sbjct: 163 MNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDH---- 218
Query: 232 PNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKV 291
T+V L CGH L++G+ +H V + + N+LV+MY KCG + AR V
Sbjct: 219 ---ATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFV 275
Query: 292 FEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGG 351
F+ + + +W MIN + G E A+ + M G VRP+ VT L++ C
Sbjct: 276 FDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEG--VRPNAVTIASLVSVCGDAL 333
Query: 352 LVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSL 411
V G R+ + I L+ + + R D V G S + W ++
Sbjct: 334 KVNDGKCLHGWAVRQQ-VYSDIIIETSLISMYAKCKRVDLCFRVFSGAS-KYHTGPWSAI 391
Query: 412 FNGC 415
GC
Sbjct: 392 IAGC 395
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 126/276 (45%), Gaps = 14/276 (5%)
Query: 148 NAEKVFDEMRERNVVSF-TAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNG 206
N K+ +E R + + A+++ Y + G +D A +FD M RDV +W +I G T++G
Sbjct: 239 NVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDG 298
Query: 207 FFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFF 266
+ L R M + +PN VT+ +S CG + GK +HG+ + +
Sbjct: 299 DVENALELCRLM-------QFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVY 351
Query: 267 VDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQM 326
D I SL+ MY KC + L +VF W+++I + A+ +F++M
Sbjct: 352 SDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRM 411
Query: 327 VECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRA 386
DV P+ T LL A + Q + +T+ G ++ LV + +
Sbjct: 412 RR--EDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKT-GFMSSLDAATGLVHVYSKC 468
Query: 387 GRFDEAMEVVRGMSME---PDEVVWGSLFNGCKVYG 419
G + A ++ G+ + D V+WG+L +G ++G
Sbjct: 469 GTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHG 504
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 78/168 (46%), Gaps = 14/168 (8%)
Query: 74 TSSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTGAVHAQIVKTGFEQYPIVQT 133
S LF+RM N + P + + R +H + KTGF T
Sbjct: 401 VSDALGLFKRMRREDVEPNIATLNSLLP-AYAALADLRQAMNIHCYLTKTGFMSSLDAAT 459
Query: 134 ALVDSYSRGLGGLGNAEKVFDEMRE----RNVVSFTAMISGYARVGDVDSALKLFDEMPE 189
LV YS+ G L +A K+F+ ++E ++VV + A+ISGY GD +AL++F EM
Sbjct: 460 GLVHVYSK-CGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVR 518
Query: 190 RDVP----SWNALIAGCTQNGFFSEGIRLFREMV----ALAAERGYRC 229
V ++ + + C+ +G EG+ LFR M+ LA Y C
Sbjct: 519 SGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTC 566
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 218 bits (555), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 131/402 (32%), Positives = 205/402 (50%), Gaps = 38/402 (9%)
Query: 31 TLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSPNIYLYTS-----------STFS 79
LG+A DFYA NL +R FD++ NI + + S
Sbjct: 352 VLGNALIDFYA---------KCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPICLS 402
Query: 80 LFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTGAVHAQIVKTGFEQYPIVQTALVDSY 139
LF +ML RP + + LKSC + +H+ IV+ G+E V ++L+ SY
Sbjct: 403 LFLQML----QMGFRPTEYTFSTALKSCCVTE-LQQLHSVIVRMGYEDNDYVLSSLMRSY 457
Query: 140 SRGLGGLGNAEKVFDEMRERNVVSFTAMISG-YARVGDVDSALKLFDEMPERDVPSWNAL 198
++ + +A + D V +++G Y+R G ++KL + + D SWN
Sbjct: 458 AKN-QLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIA 516
Query: 199 IAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHG 258
IA C+++ + E I LF+ M+ +P+ T V LS C L LG IHG
Sbjct: 517 IAACSRSDYHEEVIELFKHMLQSNI-------RPDKYTFVSILSLCSKLCDLTLGSSIHG 569
Query: 259 YVYKNDF-FVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSE 317
+ K DF D+F+ N L+DMYGKCG++ KVFE +K L +W ++I+C +HG +
Sbjct: 570 LITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQ 629
Query: 318 GAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYG 377
A+ F++ + G +PD V+F+ +L AC HGG+V++G F+ M ++YG+EP+++HY
Sbjct: 630 EALEKFKETLSLG--FKPDRVSFISILTACRHGGMVKEGMGLFQKM-KDYGVEPEMDHYR 686
Query: 378 CLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYG 419
C VDLL R G EA ++R M D VW + +GC +
Sbjct: 687 CAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCNRFA 728
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 124/287 (43%), Gaps = 41/287 (14%)
Query: 166 AMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAER 225
++IS Y + G+ A ++F + D+ SWNA+I ++ + ++LF M E
Sbjct: 255 SLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSM----PEH 310
Query: 226 GYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNL 285
G+ PN T V L +L G+ IHG + KN + N+L+D Y KCGNL
Sbjct: 311 GF---SPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNL 367
Query: 286 ALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLN 345
+R F+ DK + WN++++ +A + +++F QM++ G RP TF L
Sbjct: 368 EDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQMLQMG--FRPTEYTFSTALK 424
Query: 346 ACT-------HGGLVEQGCS----YFEMMTREYGIEPQIEHYGCLVD------------- 381
+C H +V G + R Y + L+D
Sbjct: 425 SCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNI 484
Query: 382 ---LLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAE 425
+ R G++ E+++++ + +PD V W C R+D E
Sbjct: 485 VAGIYSRRGQYHESVKLISTLE-QPDTVSWNIAIAAC---SRSDYHE 527
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 113/253 (44%), Gaps = 17/253 (6%)
Query: 165 TAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAE 224
T ++ Y R+ ++ A ++F++MP + + +WN +++ GF E + FRE+V + A
Sbjct: 153 TCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGAS 212
Query: 225 RGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGN 284
+ + L L + K +H K + + NSL+ YGKCGN
Sbjct: 213 L-------TESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGN 265
Query: 285 LALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLL 344
+A ++F+ + SWN++I A A+ +F M E G P+ T+V +L
Sbjct: 266 THMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHG--FSPNQGTYVSVL 323
Query: 345 NACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEA---MEVVRGMSM 401
+ L+ G M+ + G E I L+D + G +++ + +R
Sbjct: 324 GVSSLVQLLSCGRQIHGMLIKN-GCETGIVLGNALIDFYAKCGNLEDSRLCFDYIR---- 378
Query: 402 EPDEVVWGSLFNG 414
+ + V W +L +G
Sbjct: 379 DKNIVCWNALLSG 391
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 108/248 (43%), Gaps = 47/248 (18%)
Query: 103 VLKSCHESRS---TGAVHA-QIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRE 158
+L C ++ S T A+HA I P+ + S LG + A KVFD+M E
Sbjct: 18 LLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPE 77
Query: 159 RNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREM 218
RN VSF +I GY++ GDVD A +F EM R F
Sbjct: 78 RNKVSFNTIIKGYSKYGDVDKAWGVFSEM-------------------------RYF--- 109
Query: 219 VALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFV-DSFISNSLVD 277
GY PN T V L +C ++ G +HG K F+ D+F+ L+
Sbjct: 110 -------GYL---PNQST-VSGLLSCASLD-VRAGTQLHGLSLKYGLFMADAFVGTCLLC 157
Query: 278 MYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDG 337
+YG+ L +A +VFE P K L +WN M++ G + + F ++V G +
Sbjct: 158 LYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTES- 216
Query: 338 VTFVGLLN 345
+F+G+L
Sbjct: 217 -SFLGVLK 223
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 137/329 (41%), Gaps = 44/329 (13%)
Query: 158 ERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAG-CTQNGFFSEGIRLFR 216
E +V A+I YA+ G+++ + FD + ++++ WNAL++G ++G + LF
Sbjct: 348 ETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPIC--LSLFL 405
Query: 217 EMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYK-NDFFVDSFIS--- 272
+M+ + G+R P T AL +C T + QL I Y+ ND+ + S +
Sbjct: 406 QMLQM----GFR---PTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYA 458
Query: 273 ------------------------NSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMIN 308
N + +Y + G + K+ SWN I
Sbjct: 459 KNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIA 518
Query: 309 CFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYG 368
+ E I +F+ M++ ++RPD TFV +L+ C+ + G S ++T+
Sbjct: 519 ACSRSDYHEEVIELFKHMLQ--SNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDF 576
Query: 369 IEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFN--GCKVYGRTDLAEF 426
L+D+ G+ G M+V + E + + W +L + G YG+ L +F
Sbjct: 577 SCADTFVCNVLIDMYGKCGSIRSVMKVFEE-TREKNLITWTALISCLGIHGYGQEALEKF 635
Query: 427 AAKKLLEIDPHNGGY-GIMLANVYGELGK 454
L P + I+ A +G + K
Sbjct: 636 KETLSLGFKPDRVSFISILTACRHGGMVK 664
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 68/137 (49%), Gaps = 6/137 (4%)
Query: 270 FISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVEC 329
++ N+++ +Y K G ++LA KVF+ P++ S+N++I ++ +G + A VF +M
Sbjct: 50 YVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYF 109
Query: 330 GGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYG-CLVDLLGRAGR 388
G P+ T GLL+ L + + ++ +YG+ G CL+ L GR
Sbjct: 110 G--YLPNQSTVSGLLSC---ASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDL 164
Query: 389 FDEAMEVVRGMSMEPDE 405
+ A +V M + E
Sbjct: 165 LEMAEQVFEDMPFKSLE 181
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 133/436 (30%), Positives = 203/436 (46%), Gaps = 84/436 (19%)
Query: 78 FSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRS----TGAVHAQIVKTGFEQYPIVQT 133
S+F RM + + ++F P +L SR+ + H IVKTG+ Y +V
Sbjct: 313 LSMFGRM----HERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNN 368
Query: 134 ALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVP 193
ALVD Y A+ G +DSALK+F+ M E+DV
Sbjct: 369 ALVDMY--------------------------------AKRGIMDSALKVFEGMIEKDVI 396
Query: 194 SWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLG 253
SW AL+ G T NG + E ++LF M P+ + LSA ++L+ G
Sbjct: 397 SWTALVTGNTHNGSYDEALKLFCNMRVGGI-------TPDKIVTASVLSASAELTLLEFG 449
Query: 254 KWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALH 313
+ +HG K+ F ++NSLV MY KCG+L A +F + L +W +I +A
Sbjct: 450 QQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYA-- 507
Query: 314 GQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQI 373
GL+E YF+ M YGI P
Sbjct: 508 -----------------------------------KNGLLEDAQRYFDSMRTVYGITPGP 532
Query: 374 EHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLE 433
EHY C++DL GR+G F + +++ M +EPD VW ++ + +G + E AAK L+E
Sbjct: 533 EHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLME 592
Query: 434 IDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQ 493
++P+N + L+N+Y G+ DE NV R++K + K PGCSW+E +VH F S D+
Sbjct: 593 LEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDR 652
Query: 494 SSPKAEELYSVLESLI 509
P+ E+YS ++ ++
Sbjct: 653 RHPRMVEIYSKVDEMM 668
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 130/278 (46%), Gaps = 22/278 (7%)
Query: 144 GGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCT 203
G + A ++FD+M ER+ ++ MI Y+ + A KLF P ++ SWNALI+G
Sbjct: 42 GRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYC 101
Query: 204 QNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKN 263
++G E LF EM + KPN TL L C +L G+ IHG+ K
Sbjct: 102 KSGSKVEAFNLFWEMQSDGI-------KPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKT 154
Query: 264 DFFVDSFISNSLVDMYGKCGNLALARKVFE-MNPDKGLTSWNSMINCFALHGQSEGAIAV 322
F +D + N L+ MY +C ++ A +FE M +K +W SM+ ++ +G + AI
Sbjct: 155 GFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAI-- 212
Query: 323 FEQMVECGGDVRPDG-----VTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYG 377
EC D+R +G TF +L AC G + + G + I
Sbjct: 213 -----ECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKS-GFKTNIYVQS 266
Query: 378 CLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGC 415
L+D+ + + A ++ GM ++ D V W S+ GC
Sbjct: 267 ALIDMYAKCREMESARALLEGMEVD-DVVSWNSMIVGC 303
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 153/363 (42%), Gaps = 74/363 (20%)
Query: 78 FSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHES---RSTGAVHAQIVKTGFEQYPIVQTA 134
F+LF M + +PN + VL+ C +H +KTGF+
Sbjct: 110 FNLFWEMQSDG----IKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDL------- 158
Query: 135 LVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMP-ERDVP 193
+ NVV+ +++ YA+ + A LF+ M E++
Sbjct: 159 -----------------------DVNVVN--GLLAMYAQCKRISEAEYLFETMEGEKNNV 193
Query: 194 SWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLG 253
+W +++ G +QNGF + I FR++ N+ N T L+AC S ++G
Sbjct: 194 TWTSMLTGYSQNGFAFKAIECFRDL-------RREGNQSNQYTFPSVLTACASVSACRVG 246
Query: 254 KWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALH 313
+H + K+ F + ++ ++L+DMY KC + AR + E + SWNSMI
Sbjct: 247 VQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQ 306
Query: 314 GQSEGAIAVFEQMVECGGDVRPDGVTFVGLLN------------ACTHGGLVEQGCSYFE 361
G A+++F +M E D++ D T +LN + H +V+ G + ++
Sbjct: 307 GLIGEALSMFGRMHE--RDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYK 364
Query: 362 MMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRT 421
++ LVD+ + G D A++V GM +E D + W +L G G
Sbjct: 365 LVN------------NALVDMYAKRGIMDSALKVFEGM-IEKDVISWTALVTGNTHNGSY 411
Query: 422 DLA 424
D A
Sbjct: 412 DEA 414
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 123/365 (33%), Positives = 206/365 (56%), Gaps = 25/365 (6%)
Query: 125 FEQYPIVQTALVDSYSRGLG------GLGNAEKVFDEMRERNVVSFTAMISGYARVGDVD 178
FE+ P + V ++S LG + +A K F+++ E+N ++ M+SGY R+GDV
Sbjct: 167 FERMPF-ELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVH 225
Query: 179 SALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLV 238
A +F + RD+ WN LIAG QNG+ + I F M GY +P+ VT+
Sbjct: 226 EARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQG----EGY---EPDAVTVS 278
Query: 239 CALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDK 298
LSAC + L +G+ +H + ++ F+SN+L+DMY KCG+L A VFE +
Sbjct: 279 SILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVR 338
Query: 299 GLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCS 358
+ NSMI+C A+HG+ + A+ +F M D++PD +TF+ +L AC HGG + +G
Sbjct: 339 SVACCNSMISCLAIHGKGKEALEMFSTMESL--DLKPDEITFIAVLTACVHGGFLMEGLK 396
Query: 359 YF-EMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKV 417
F EM T++ ++P ++H+GCL+ LLGR+G+ EA +V+ M ++P++ V G+L CKV
Sbjct: 397 IFSEMKTQD--VKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKV 454
Query: 418 YGRTDLAEFAAKKLLE-----IDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYK 472
+ T++AE K++E + ++ + ++N+Y +W + ++++ K
Sbjct: 455 HMDTEMAE-QVMKIIETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEK 513
Query: 473 VPGCS 477
PG S
Sbjct: 514 SPGLS 518
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 171/397 (43%), Gaps = 74/397 (18%)
Query: 116 VHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVG 175
+H++ +K G +V ++L+ Y + G + +A KVFDEM ERNV ++ AMI GY G
Sbjct: 68 LHSESIKFGVCSDVMVGSSLISMYGK-CGCVVSARKVFDEMPERNVATWNAMIGGYMSNG 126
Query: 176 DVDSALKLFDEMPE-RDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNP 234
D A LF+E+ R+ +W +I G + + LF M P
Sbjct: 127 DAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERM-------------PFE 173
Query: 235 VTLVCALSACGHTSMLQLGKWIHGYVYKN--DFFVD-----SFISNSLVDMYGKCGNLAL 287
+ V A S + LG +++ ++ FF D +F+ + ++ Y + G++
Sbjct: 174 LKNVKAWS-------VMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHE 226
Query: 288 ARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNAC 347
AR +F + L WN++I +A +G S+ AI F M G PD VT +L+AC
Sbjct: 227 ARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQ--GEGYEPDAVTVSSILSAC 284
Query: 348 THGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMS------- 400
G ++ G ++ GIE L+D+ + G + A V +S
Sbjct: 285 AQSGRLDVGREVHSLINHR-GIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACC 343
Query: 401 ---------------------------MEPDEVVWGSLFNGCKVYG---RTDLAEFAAKK 430
++PDE+ + ++ C V+G L F+ K
Sbjct: 344 NSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTAC-VHGGFLMEGLKIFSEMK 402
Query: 431 LLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQ 467
++ P+ +G ++ LG+ +++ +R++K+
Sbjct: 403 TQDVKPNVKHFGCLIH----LLGRSGKLKEAYRLVKE 435
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 87/183 (47%), Gaps = 10/183 (5%)
Query: 232 PNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKV 291
P V L+ AC ++ LGK +H K D + +SL+ MYGKCG + ARKV
Sbjct: 45 PGWVPLILRACACVVPRVV-LGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKV 103
Query: 292 FEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGG 351
F+ P++ + +WN+MI + +G + A +FE++ C + VT++ ++
Sbjct: 104 FDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVC-----RNTVTWIEMIKGYGKRI 158
Query: 352 LVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSL 411
+E+ FE M E ++ + ++ + + ++A + + E + VW +
Sbjct: 159 EIEKARELFERMPFEL---KNVKAWSVMLGVYVNNRKMEDARKFFEDIP-EKNAFVWSLM 214
Query: 412 FNG 414
+G
Sbjct: 215 MSG 217
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 127/440 (28%), Positives = 209/440 (47%), Gaps = 58/440 (13%)
Query: 54 NLPYARRIFDHLHSPNI------------YLYTSSTFSLFRRMLCNSNPTTTRPNNFIYP 101
++ RRIF + P++ Y + S FR+M +P+
Sbjct: 365 DVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQM----QFQNLKPDKTTLS 420
Query: 102 HVLKSCHESR---STGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRE 158
+L SC R +H +++T + + + L+ YS + +E +FD
Sbjct: 421 VILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSE-CEKMEISECIFD---- 475
Query: 159 RNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREM 218
D + E D+ WN++I+G N ++ + LFR M
Sbjct: 476 --------------------------DCINELDIACWNSMISGFRHNMLDTKALILFRRM 509
Query: 219 VALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDM 278
A C PN + LS+C L G+ HG V K+ + DSF+ +L DM
Sbjct: 510 HQTAV----LC--PNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDM 563
Query: 279 YGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGV 338
Y KCG + AR+ F+ K WN MI+ + +G+ + A+ ++ +M+ G +PDG+
Sbjct: 564 YCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGE--KPDGI 621
Query: 339 TFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRG 398
TFV +L AC+H GLVE G M R +GIEP+++HY C+VD LGRAGR ++A ++
Sbjct: 622 TFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEA 681
Query: 399 MSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEV 458
+ V+W L + C+V+G LA A+KL+ +DP + ++L+N Y L +WD+
Sbjct: 682 TPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDS 741
Query: 459 RNVWRILKQQKSYKVPGCSW 478
+ ++ + + +K PG SW
Sbjct: 742 AALQGLMNKNRVHKTPGQSW 761
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/435 (22%), Positives = 186/435 (42%), Gaps = 69/435 (15%)
Query: 55 LPYARRIFDHLHSPNIYLYTSSTFSLFR-----------RMLCNSNPTTTRP--NNFIYP 101
+ Y R+F+ L PN YT+ L R R++C +N +
Sbjct: 190 VDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSI 249
Query: 102 HVLKSCHESRST-------GAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFD 154
+ +S S +H ++ GF + +L++ Y++ + AE +F
Sbjct: 250 SAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKN-KDMNGAELIFA 308
Query: 155 EMRERNVVSFTAMISGYA-----------------------------------RVGDVDS 179
EM E NVVS+ MI G+ R GDV++
Sbjct: 309 EMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVET 368
Query: 180 ALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVC 239
++F +P+ V +WNA+++G + + E I FR+M ++ KP+ TL
Sbjct: 369 GRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQM-------QFQNLKPDKTTLSV 421
Query: 240 ALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDK- 298
LS+C L+ GK IHG V + + +S I + L+ +Y +C + ++ +F+ ++
Sbjct: 422 ILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINEL 481
Query: 299 GLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCS 358
+ WNSMI+ F + A+ +F +M + + P+ +F +L++C+ + G
Sbjct: 482 DIACWNSMISGFRHNMLDTKALILFRRMHQTAV-LCPNETSFATVLSSCSRLCSLLHGRQ 540
Query: 359 YFEMMTRE-YGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKV 417
+ ++ + Y + +E L D+ + G D A + + + + V+W + +G
Sbjct: 541 FHGLVVKSGYVSDSFVET--ALTDMYCKCGEIDSARQFFDAV-LRKNTVIWNEMIHGYGH 597
Query: 418 YGRTDLAEFAAKKLL 432
GR D A +K++
Sbjct: 598 NGRGDEAVGLYRKMI 612
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 113/235 (48%), Gaps = 11/235 (4%)
Query: 112 STGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGY 171
S +H IV+ G + + L+D Y G A KVFDEM R+V S+ A ++
Sbjct: 24 SGKVIHGFIVRMGMKSDTYLCNRLLDLYIE-CGDGDYARKVFDEMSVRDVYSWNAFLTFR 82
Query: 172 ARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNK 231
+VGD+ A ++FD MPERDV SWN +I+ + GF + + +++ MV G+
Sbjct: 83 CKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVC----DGFL--- 135
Query: 232 PNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLA-LARK 290
P+ TL LSAC G HG K + F+ N+L+ MY KCG + +
Sbjct: 136 PSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVR 195
Query: 291 VFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLN 345
VFE S+ ++I A + A+ +F M E G V+ D V +L+
Sbjct: 196 VFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKG--VQVDSVCLSNILS 248
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 171/386 (44%), Gaps = 45/386 (11%)
Query: 57 YARRIFDHLHSPNIYLYTSSTFSLFRRMLCNSNPT-----------TTRPNNFIYPHVLK 105
YAR++FD + ++Y + + F FR + + NN I V K
Sbjct: 59 YARKVFDEMSVRDVYSWNA--FLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRK 116
Query: 106 SCHESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGL------GNAEKVFDEMRER 159
E V+ ++V GF +++ + S+ L G+ G A K ++
Sbjct: 117 GFEEK--ALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKT---GLDK 171
Query: 160 NVVSFTAMISGYARVG-DVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREM 218
N+ A++S YA+ G VD +++F+ + + + S+ A+I G + E +++FR
Sbjct: 172 NIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFR-- 229
Query: 219 VALAAERGYRCNK---PNPVTLVCALSACGHTSML---QLGKWIHGYVYKNDFFVDSFIS 272
L E+G + + N +++ C S + +LGK IH + F D ++
Sbjct: 230 --LMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLN 287
Query: 273 NSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGD 332
NSL+++Y K ++ A +F P+ + SWN MI F +S+ ++ +M + G
Sbjct: 288 NSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSG-- 345
Query: 333 VRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEA 392
+P+ VT + +L AC G VE G F + +P + + ++ ++EA
Sbjct: 346 FQPNEVTCISVLGACFRSGDVETGRRIFSSIP-----QPSVSAWNAMLSGYSNYEHYEEA 400
Query: 393 MEVVRGM---SMEPDEVVWGSLFNGC 415
+ R M +++PD+ + + C
Sbjct: 401 ISNFRQMQFQNLKPDKTTLSVILSSC 426
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 110/253 (43%), Gaps = 59/253 (23%)
Query: 253 GKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVF-EMN---------------- 295
GK IHG++ + D+++ N L+D+Y +CG+ ARKVF EM+
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 296 --------------PDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFV 341
P++ + SWN+MI+ G E A+ V+++MV C G + P T
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMV-CDGFL-PSRFTLA 142
Query: 342 GLLNACTH--GGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRF-DEAMEVVRG 398
+L+AC+ G+ C + T G++ I L+ + + G D + V
Sbjct: 143 SVLSACSKVLDGVFGMRCHGVAVKT---GLDKNIFVGNALLSMYAKCGFIVDYGVRVFES 199
Query: 399 MSMEPDEVVWGSLFNGC----KVYGRTDLAEFAAKKLLEID------------PHNGGYG 442
+S +P+EV + ++ G KV + +K +++D P G
Sbjct: 200 LS-QPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDS 258
Query: 443 IMLANVYG-ELGK 454
L+ +YG ELGK
Sbjct: 259 --LSEIYGNELGK 269
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 113/318 (35%), Positives = 177/318 (55%), Gaps = 8/318 (2%)
Query: 166 AMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAER 225
A+IS Y++ G ++ A LF+ +++ SWNA+I+G NGF EG+ F ++ E
Sbjct: 426 ALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLL----ES 481
Query: 226 GYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNL 285
R P+ TL LS C TS L LG H YV ++ F ++ I N+L++MY +CG +
Sbjct: 482 EVRI-LPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTI 540
Query: 286 ALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLN 345
+ +VF +K + SWNS+I+ ++ HG+ E A+ ++ M + G V PD TF +L+
Sbjct: 541 QNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQD-EGKVIPDAATFSAVLS 599
Query: 346 ACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVR--GMSMEP 403
AC+H GLVE+G F M +G+ ++H+ CLVDLLGRAG DEA +V+ ++
Sbjct: 600 ACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGS 659
Query: 404 DEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWR 463
VW +LF+ C +G L + AK L+E + + + L+N+Y G W E R
Sbjct: 660 RVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRR 719
Query: 464 ILKQQKSYKVPGCSWIEI 481
+ + K GCSW+ +
Sbjct: 720 AINMIGAMKQRGCSWMRL 737
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 187/374 (50%), Gaps = 43/374 (11%)
Query: 91 TTTRPNNFIYPHVLKSCHESRST---GAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLG 147
TT RP+ + + + R T G VH +++G + V L+ Y R LG L
Sbjct: 51 TTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYER-LGNLA 109
Query: 148 NAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPER-DVPSWNALIAGCTQNG 206
+ +K FDE+ E +V S+T ++S ++GD++ A ++FD+MPER DV WNA+I GC ++G
Sbjct: 110 SLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESG 169
Query: 207 FFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFF 266
+ + LFREM L G R +K T+ LS C + S L GK +H V K FF
Sbjct: 170 YHETSVELFREMHKL----GVRHDKFGFATI---LSMCDYGS-LDFGKQVHSLVIKAGFF 221
Query: 267 VDSFISNSLVDMYGKCGNLALARKVFEMN--PDKGLTSWNSMINCFALHGQSEGAIAVFE 324
+ S + N+L+ MY C + A VFE + ++N +I+ A + E ++ VF
Sbjct: 222 IASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKRDE-SLLVFR 280
Query: 325 QMVECGGDVRPDGVTFVGLLNACT--------HGGLVEQGCSYFEMMTREYGIEPQIEHY 376
+M+E +RP +TFV ++ +C+ HG ++ G + +++ + Y
Sbjct: 281 KMLE--ASLRPTDLTFVSVMGSCSCAAMGHQVHGLAIKTGYEKYTLVSN-----ATMTMY 333
Query: 377 GCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSL---FNGCKVYGRTDLAEFAAKKLLE 433
D G A + E++E E D V W ++ +N K+ G++ ++ + ++
Sbjct: 334 SSFED-FGAAHKVFESLE-------EKDLVTWNTMISSYNQAKL-GKSAMSVYKRMHIIG 384
Query: 434 IDPHNGGYGIMLAN 447
+ P +G +LA
Sbjct: 385 VKPDEFTFGSLLAT 398
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 140/340 (41%), Gaps = 48/340 (14%)
Query: 80 LFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTGAVHAQIVKTGFEQYPIVQTALVDSY 139
+FR+ML + RP + + V+ SC + VH +KTG+E+Y +V A + Y
Sbjct: 278 VFRKML----EASLRPTDLTFVSVMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMY 333
Query: 140 SRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALI 199
S SF D +A K+F+ + E+D+ +WN +I
Sbjct: 334 S----------------------SFE----------DFGAAHKVFESLEEKDLVTWNTMI 361
Query: 200 AGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGY 259
+ Q + +++ M + KP+ T L+ +L++ +
Sbjct: 362 SSYNQAKLGKSAMSVYKRMHIIGV-------KPDEFTFGSLLATSLDLDVLEM---VQAC 411
Query: 260 VYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGA 319
+ K ISN+L+ Y K G + A +FE + K L SWN++I+ F +G
Sbjct: 412 IIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEG 471
Query: 320 IAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCL 379
+ F ++E + PD T LL+ C + G + R +G + L
Sbjct: 472 LERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLR-HGQFKETLIGNAL 530
Query: 380 VDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYG 419
+++ + G ++EV MS E D V W SL + +G
Sbjct: 531 INMYSQCGTIQNSLEVFNQMS-EKDVVSWNSLISAYSRHG 569
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/424 (22%), Positives = 178/424 (41%), Gaps = 79/424 (18%)
Query: 11 TILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHL-HSPN 69
T+L L +L L+ + D Y++ + + L ++ YA +FD + +
Sbjct: 97 TLLSLYERLGNLASLKKKFDEIDEP--DVYSWTTLLSASFKLGDIEYAFEVFDKMPERDD 154
Query: 70 IYL------------YTSSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSC-HESRSTGA- 115
+ + Y ++ LFR M + R + F + +L C + S G
Sbjct: 155 VAIWNAMITGCKESGYHETSVELFREM----HKLGVRHDKFGFATILSMCDYGSLDFGKQ 210
Query: 116 VHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVG 175
VH+ ++K GF V AL+ Y N + V D
Sbjct: 211 VHSLVIKAGFFIASSVVNALITMYF-------NCQVVVD--------------------- 242
Query: 176 DVDSALKLFDE--MPERDVPSWNALIAGCTQNGF-FSEGIRLFREMVALAAERGYRCNKP 232
A +F+E + RD ++N +I G GF E + +FR+M+ + +P
Sbjct: 243 ----ACLVFEETDVAVRDQVTFNVVIDGLA--GFKRDESLLVFRKMLEASL-------RP 289
Query: 233 NPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVF 292
+T V + +C +M G +HG K + + +SN+ + MY + A KVF
Sbjct: 290 TDLTFVSVMGSCSCAAM---GHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVF 346
Query: 293 EMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGL 352
E +K L +WN+MI+ + + A++V+++M G V+PD TF LL +
Sbjct: 347 ESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIG--VKPDEFTFGSLLATSLDLDV 404
Query: 353 VE--QGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGS 410
+E Q C ++G+ +IE L+ + G+ ++A +++ S+ + + W +
Sbjct: 405 LEMVQAC------IIKFGLSSKIEISNALISAYSKNGQIEKA-DLLFERSLRKNLISWNA 457
Query: 411 LFNG 414
+ +G
Sbjct: 458 IISG 461
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 125/295 (42%), Gaps = 60/295 (20%)
Query: 95 PNNFIYPHVLKSCHESRST---GAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEK 151
P+ + +L C + S HA +++ G + ++ AL++ YS+ G + N+ +
Sbjct: 487 PDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQ-CGTIQNSLE 545
Query: 152 VFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPER-----DVPSWNALIAGCTQNG 206
VF++M E++VVS+ ++IS Y+R G+ ++A+ + M + D +++A+++ C+ G
Sbjct: 546 VFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAG 605
Query: 207 FFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFF 266
EG+ +F MV HG + D F
Sbjct: 606 LVEEGLEIFNSMVEF-----------------------------------HGVIRNVDHF 630
Query: 267 VDSFISNSLVDMYGKCGNLALAR---KVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVF 323
+ LVD+ G+ G+L A K+ E + W ++ + A HG + V
Sbjct: 631 ------SCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVA 684
Query: 324 EQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGC 378
+ ++E D D +V L N G+ ++ E R + ++ GC
Sbjct: 685 KLLMEKEKD---DPSVYVQLSNIYAGAGMWKEA----EETRRAINMIGAMKQRGC 732
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 77/172 (44%), Gaps = 15/172 (8%)
Query: 196 NALIAGCTQNGFFSEGIRLFREMVALAAERGYRCN--KPNPVTLVCALSACGHTSMLQLG 253
N + G T++G ++LF ++ +RC +P+ ++ A++ H G
Sbjct: 25 NRRLTGLTRSGENRNALKLFADV--------HRCTTLRPDQYSVSLAITTARHLRDTIFG 76
Query: 254 KWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALH 313
+H Y ++ S +SN+L+ +Y + GNLA +K F+ + + SW ++++
Sbjct: 77 GQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKL 136
Query: 314 GQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTR 365
G E A VF++M E R D + ++ C G E F M +
Sbjct: 137 GDIEYAFEVFDKMPE-----RDDVAIWNAMITGCKESGYHETSVELFREMHK 183
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 135/479 (28%), Positives = 225/479 (46%), Gaps = 73/479 (15%)
Query: 54 NLPYARRIFDHLHSPNIYLY-----------------TSSTFSLFRRMLCNSNPTTTRPN 96
+L A ++F + S N+ Y +S F LF M P+
Sbjct: 302 SLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDM----QRRGLEPS 357
Query: 97 NFIYPHVLKSCHESRSTG---AVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVF 153
+ VLK+C +++ +HA I K F+ + +AL++ Y
Sbjct: 358 PSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELY-------------- 403
Query: 154 DEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIR 213
A +G + ++ F ++D+ SW ++I QN
Sbjct: 404 ------------------ALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFD 445
Query: 214 LFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFIS- 272
LFR++ + +P T+ +SAC + L G+ I GY K+ +D+F S
Sbjct: 446 LFRQLFSSHI-------RPEEYTVSLMMSACADFAALSSGEQIQGYAIKSG--IDAFTSV 496
Query: 273 -NSLVDMYGKCGNLALARKVF--EMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVEC 329
S + MY K GN+ LA +VF NPD + ++++MI+ A HG + A+ +FE M
Sbjct: 497 KTSSISMYAKSGNMPLANQVFIEVQNPD--VATYSAMISSLAQHGSANEALNIFESMKTH 554
Query: 330 GGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRF 389
G ++P+ F+G+L AC HGGLV QG YF+ M +Y I P +H+ CLVDLLGR GR
Sbjct: 555 G--IKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRL 612
Query: 390 DEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVY 449
+A ++ + V W +L + C+VY + + + A++L+E++P G ++L N+Y
Sbjct: 613 SDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIY 672
Query: 450 GELGKWDEVRNVWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESL 508
+ G V +++ + K P SWI I +Q H F D S P ++ +Y++LE++
Sbjct: 673 NDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTMLETM 731
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 173/387 (44%), Gaps = 60/387 (15%)
Query: 103 VLKSCHESRSTG------AVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEM 156
VLK+C + + G A+H K G E +V+TAL+D Y++ G L A K+F M
Sbjct: 255 VLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKN-GSLKEAIKLFSLM 313
Query: 157 RERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFR 216
+NVV++ AMISG+ ++ ++ DE SE +LF
Sbjct: 314 PSKNVVTYNAMISGFLQMDEIT------DEAS--------------------SEAFKLFM 347
Query: 217 EMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLV 276
+M RG +P+P T L AC L+ G+ IH + KN+F D FI ++L+
Sbjct: 348 DM----QRRGL---EPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALI 400
Query: 277 DMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPD 336
++Y G+ + F + + SW SMI+C + Q E A +F Q+ +RP+
Sbjct: 401 ELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLF--SSHIRPE 458
Query: 337 GVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCL----VDLLGRAGRFDEA 392
T +++AC + G + Y I+ I+ + + + + ++G A
Sbjct: 459 EYTVSLMMSACADFAALSSG-----EQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLA 513
Query: 393 MEVVRGMSMEPDEVVWGSLFNGCKVYGRTD--LAEFAAKKLLEIDPHNGGY-GIMLANVY 449
+V + PD + ++ + +G + L F + K I P+ + G+++A +
Sbjct: 514 NQVFIEVQ-NPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCH 572
Query: 450 G-----ELGKWDEVRNVWRILKQQKSY 471
G L + ++N +RI +K +
Sbjct: 573 GGLVTQGLKYFQCMKNDYRINPNEKHF 599
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 125/247 (50%), Gaps = 14/247 (5%)
Query: 171 YARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCN 230
Y + ++ A +LFD MPER++ S+N+LI+G TQ GF+ + + LF E A E + +
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLE----AREANLKLD 147
Query: 231 KPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARK 290
K T AL CG L LG+ +HG V N F+ N L+DMY KCG L A
Sbjct: 148 K---FTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMS 204
Query: 291 VFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACT-- 348
+F+ ++ SWNS+I+ + G +E + + +M G ++ + V L AC
Sbjct: 205 LFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSV--LKACCIN 262
Query: 349 -HGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVV 407
+ G +E+G + T + G+E I L+D+ + G EA+++ M + V
Sbjct: 263 LNEGFIEKGMA-IHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMP-SKNVVT 320
Query: 408 WGSLFNG 414
+ ++ +G
Sbjct: 321 YNAMISG 327
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 121/271 (44%), Gaps = 28/271 (10%)
Query: 159 RNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREM 218
+ V +I Y++ G +D A+ LFD ERD SWN+LI+G + G E + L +M
Sbjct: 181 QQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKM 240
Query: 219 VALAAERGYRCNKPNPVT--LVCALSACG---HTSMLQLGKWIHGYVYKNDFFVDSFISN 273
+R + N T L L AC + ++ G IH Y K D +
Sbjct: 241 --------HR-DGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRT 291
Query: 274 SLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQ-----SEGAIAVFEQMVE 328
+L+DMY K G+L A K+F + P K + ++N+MI+ F + S A +F M
Sbjct: 292 ALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQR 351
Query: 329 CGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHY--GCLVDLLGRA 386
G + P TF +L AC+ +E G ++ + Q + + L++L
Sbjct: 352 RG--LEPSPSTFSVVLKACSAAKTLEYGRQIHALICKN---NFQSDEFIGSALIELYALM 406
Query: 387 GRFDEAMEVVRGMSMEPDEVVWGSLFNGCKV 417
G ++ M+ S + D W S+ + C V
Sbjct: 407 GSTEDGMQCFASTS-KQDIASWTSMID-CHV 435
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 128/434 (29%), Positives = 219/434 (50%), Gaps = 22/434 (5%)
Query: 58 ARRIFDHLHSPNIYL-------YTSSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHES 110
+R +FD + + L Y ++ + +L N TR ++ V+ +C
Sbjct: 272 SRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETREDSRTLAAVINACIGL 331
Query: 111 ---RSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAM 167
+ +H K G +V + L+D YS+ G A K+F E+ + + +M
Sbjct: 332 GFLETGKQMHCHACKFGLIDDIVVASTLLDMYSK-CGSPMEACKLFSEVESYDTILLNSM 390
Query: 168 ISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGY 227
I Y G +D A ++F+ + + + SWN++ G +QNG E + F +M +
Sbjct: 391 IKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQM--------H 442
Query: 228 RCNKP-NPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLA 286
+ + P + V+L +SAC S L+LG+ + D +S+SL+D+Y KCG +
Sbjct: 443 KLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVE 502
Query: 287 LARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNA 346
R+VF+ WNSMI+ +A +GQ AI +F++M G +RP +TF+ +L A
Sbjct: 503 HGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAG--IRPTQITFMVVLTA 560
Query: 347 CTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEV 406
C + GLVE+G FE M ++G P EH+ C+VDLL RAG +EA+ +V M + D
Sbjct: 561 CNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGS 620
Query: 407 VWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILK 466
+W S+ GC G + + AA+K++E++P N + L+ ++ G W+ V ++++
Sbjct: 621 MWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMR 680
Query: 467 QQKSYKVPGCSWIE 480
+ K PG SW +
Sbjct: 681 ENNVTKNPGSSWTD 694
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 171/386 (44%), Gaps = 70/386 (18%)
Query: 100 YPHVLKSCHESRSTGAVHAQ----IVKTGF-EQYPIVQTALVDSYSRGLGGLGNAEKVFD 154
Y +L+SC SR+ + Q ++K GF IV L+ YSR G +G A +FD
Sbjct: 29 YVRLLQSC-SSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRS-GKMGIARNLFD 86
Query: 155 EMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRL 214
EM +RN S+ MI GY G+ ++L+ FD MPERD SWN +++G + G S RL
Sbjct: 87 EMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRL 146
Query: 215 F-----REMVALA-----------AERGYRCNK-----PNPVTLVCALSACGHTSMLQLG 253
F +++V L AE R K + +TL L AC L+ G
Sbjct: 147 FNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADAITLTTVLKACAELEALKCG 206
Query: 254 KWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALA------------------------- 288
K IH + DS +++SLV++Y KCG+L +A
Sbjct: 207 KQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANC 266
Query: 289 ------RKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVG 342
R +F+ ++ + WNSMI+ + + A+ +F +M + R D T
Sbjct: 267 GRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEM---RNETREDSRTLAA 323
Query: 343 LLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSME 402
++NAC G +E G ++G+ I L+D+ + G EA ++ +
Sbjct: 324 VINACIGLGFLETG-KQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVE-S 381
Query: 403 PDEVVWGSLFNGCKVY---GRTDLAE 425
D ++ S+ KVY GR D A+
Sbjct: 382 YDTILLNSMI---KVYFSCGRIDDAK 404
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 114/332 (34%), Positives = 186/332 (56%), Gaps = 14/332 (4%)
Query: 158 ERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFRE 217
ER +F M Y R G+V + LF+ RDV W+++I+G + G SE + L +
Sbjct: 287 ERLTAAFMTM---YCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQ 343
Query: 218 MVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVD 277
M E N VTL+ +SAC ++++L +H + K F + N+L+D
Sbjct: 344 MRKEGIE-------ANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALID 396
Query: 278 MYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDG 337
MY KCG+L+ AR+VF +K L SW+SMIN + LHG A+ +F+ M++ G +V D
Sbjct: 397 MYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEV--DD 454
Query: 338 VTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVR 397
+ F+ +L+AC H GLVE+ + F + Y + +EHY C ++LLGR G+ D+A EV
Sbjct: 455 MAFLAILSACNHAGLVEEAQTIFTQAGK-YHMPVTLEHYACYINLLGRFGKIDDAFEVTI 513
Query: 398 GMSMEPDEVVWGSLFNGCKVYGRTDLA-EFAAKKLLEIDPHNGGYGIMLANVYGELGKWD 456
M M+P +W SL + C+ +GR D+A + A +L++ +P N ++L+ ++ E G +
Sbjct: 514 NMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYH 573
Query: 457 EVRNVWRILKQQKSYKVPGCSWIEIDDQVHQF 488
V R+++++K K G S IE + Q+ +
Sbjct: 574 AAEEVRRVMQRRKLNKCYGFSKIEPELQIEDY 605
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 143/282 (50%), Gaps = 14/282 (4%)
Query: 140 SRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALI 199
S + + +A + DE + +V+ TA++ Y + D +A +FD+M ++ SW A+I
Sbjct: 164 SSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMI 223
Query: 200 AGCTQNGFFSEGIRLFREMVALAAERGYRCN-KPNPVTLVCALSACGHTSM-LQLGKWIH 257
+GC N + G+ LFR M R N +PN VTL+ L AC + L K IH
Sbjct: 224 SGCVANQNYEMGVDLFRAM--------QRENLRPNRVTLLSVLPACVELNYGSSLVKEIH 275
Query: 258 GYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSE 317
G+ +++ D ++ + + MY +CGN++L+R +FE + + + W+SMI+ +A G
Sbjct: 276 GFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCS 335
Query: 318 GAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYG 377
+ + QM + G + + VT + +++ACT+ L+ + + + G I
Sbjct: 336 EVMNLLNQMRKEG--IEANSVTLLAIVSACTNSTLLSFASTVHSQILK-CGFMSHILLGN 392
Query: 378 CLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYG 419
L+D+ + G A EV ++ E D V W S+ N ++G
Sbjct: 393 ALIDMYAKCGSLSAAREVFYELT-EKDLVSWSSMINAYGLHG 433
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 116/268 (43%), Gaps = 34/268 (12%)
Query: 160 NVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMV 219
+ V ++IS YA+ + K+FDEM RD S+ ++I C Q+G E ++L +EM
Sbjct: 81 DTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMY 140
Query: 220 ALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDS-FISNSLVDM 278
G+ +L+ + G +S ++ + H V ++ +S +S +LVDM
Sbjct: 141 FY----GFIPKSELVASLLALCTRMGSSS--KVARMFHALVLVDERMQESVLLSTALVDM 194
Query: 279 YGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGV 338
Y K + A A VF+ K SW +MI+ + E + +F M ++RP+ V
Sbjct: 195 YLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQR--ENLRPNRV 252
Query: 339 TFVGLLNACT------------HGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRA 386
T + +L AC HG GC E +T + + + R
Sbjct: 253 TLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAF------------MTMYCRC 300
Query: 387 GRFDEAMEVVRGMSMEPDEVVWGSLFNG 414
G + V+ S D V+W S+ +G
Sbjct: 301 GNVSLS-RVLFETSKVRDVVMWSSMISG 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 88/218 (40%), Gaps = 9/218 (4%)
Query: 199 IAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHG 258
+ G + F+ E +RL++ + G+ P+ V CA LG +H
Sbjct: 17 LKGLVSDQFYDEALRLYKLKIHSLGTNGFTAILPS-VIKACAF----QQEPFLLGAQLHC 71
Query: 259 YVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEG 318
K D+ +SNSL+ MY K RKVF+ + S+ S+IN G
Sbjct: 72 LCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYE 131
Query: 319 AIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFE-MMTREYGIEPQIEHYG 377
A+ + ++M G P LL CT G + F ++ + ++ +
Sbjct: 132 AMKLIKEMYFYG--FIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLST 189
Query: 378 CLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGC 415
LVD+ + A V M ++ +EV W ++ +GC
Sbjct: 190 ALVDMYLKFDDHAAAFHVFDQMEVK-NEVSWTAMISGC 226
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 140/475 (29%), Positives = 225/475 (47%), Gaps = 63/475 (13%)
Query: 50 LTLSNLPYARRIFDHLHSPNIYLYTS------------STFSLFRRMLCNSNPTTTRPNN 97
L + A ++F + N+ +T+ LF+ ML +T+RP
Sbjct: 170 LQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRP-- 227
Query: 98 FIYPHVLKSCHESRSTG---AVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFD 154
+ V+ +C + + VH I+K GF +++
Sbjct: 228 --FTCVITACANAPAFHMGIQVHGLIIKLGF--------------------------LYE 259
Query: 155 EMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRL 214
E ++++F A R+GD + K+FDE V W AL++G + N + + +
Sbjct: 260 EYVSASLITFYA---NCKRIGD---SRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSI 313
Query: 215 FREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNS 274
F M+ + PN T L++C L GK +HG K D+F+ NS
Sbjct: 314 FSGMLRNSI-------LPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNS 366
Query: 275 LVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVR 334
LV MY GN+ A VF K + SWNS+I A HG+ + A +F QM+ +
Sbjct: 367 LVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKE-- 424
Query: 335 PDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYG-IEPQIEHYGCLVDLLGRAGRFDEAM 393
PD +TF GLL+AC+H G +E+G F M+ I+ +I+HY C+VD+LGR G+ EA
Sbjct: 425 PDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAE 484
Query: 394 EVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELG 453
E++ M ++P+E+VW +L + C+++ D E AA + +D + ++L+N+Y G
Sbjct: 485 ELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAG 544
Query: 454 KWDEVRNVWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESL 508
+W V + +K+ K PG SW+ I + H+FFS DQ P +Y LE L
Sbjct: 545 RWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQ--PHCSRIYEKLEFL 597
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 178/371 (47%), Gaps = 17/371 (4%)
Query: 58 ARRIFDHLHSPNIYLYTS--STFSLFRRMLCNSNPTTTRPNNFI--YPHVLKSCHESRST 113
AR +F+ + SP++ LYT + ++ R++ N P + + ++ C E
Sbjct: 54 AREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDM 113
Query: 114 GAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYAR 173
++ E+ + TA+V+ R G + AE++F +M ++ ++ +M+ GY +
Sbjct: 114 NTA-VKLFDEMPERSVVSWTAMVNGCFRS-GKVDQAERLFYQMPVKDTAAWNSMVHGYLQ 171
Query: 174 VGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPN 233
G VD ALKLF +MP ++V SW +I G QN E + LF+ M+ C K
Sbjct: 172 FGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRC-------CIKST 224
Query: 234 PVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFE 293
C ++AC + +G +HG + K F + ++S SL+ Y C + +RKVF+
Sbjct: 225 SRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFD 284
Query: 294 MNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLV 353
+ + W ++++ ++L+ + E A+++F M+ + P+ TF LN+C+ G +
Sbjct: 285 EKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLR--NSILPNQSTFASGLNSCSALGTL 342
Query: 354 EQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFN 413
+ G + + G+E LV + +G ++A+ V + + V W S+
Sbjct: 343 DWG-KEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI-FKKSIVSWNSIIV 400
Query: 414 GCKVYGRTDLA 424
GC +GR A
Sbjct: 401 GCAQHGRGKWA 411
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 157/359 (43%), Gaps = 56/359 (15%)
Query: 146 LGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQN 205
+ A +VF+++ +V +T MI+GY R + AL LFDEMP RDV SWN++I+GC +
Sbjct: 51 IDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVEC 110
Query: 206 GFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDF 265
G + ++LF EM ER + V+ ++ C + + + ++
Sbjct: 111 GDMNTAVKLFDEM----PER-------SVVSWTAMVNGCFRSGKVDQAE----RLFYQMP 155
Query: 266 FVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQ 325
D+ NS+V Y + G + A K+F+ P K + SW +MI + +S A+ +F+
Sbjct: 156 VKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKN 215
Query: 326 MVECGGDVRPDGVTFVGLLNAC-----------THGGLVEQGCSYFEMMTR--------- 365
M+ C ++ F ++ AC HG +++ G Y E ++
Sbjct: 216 MLRCC--IKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANC 273
Query: 366 ----------EYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGM---SMEPDEVVWGSLF 412
+ + Q+ + L+ + ++A+ + GM S+ P++ + S
Sbjct: 274 KRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGL 333
Query: 413 NGCKVYGRTDLAE----FAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQ 467
N C G D + A K LE D G +++ + G + D V +I K+
Sbjct: 334 NSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVN--DAVSVFIKIFKK 390
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 211 bits (538), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 126/443 (28%), Positives = 212/443 (47%), Gaps = 77/443 (17%)
Query: 116 VHAQIVKTGFEQYPIVQTALVDSYSR---------------------------GLGGLGN 148
+H QIVKTGF+ ++TAL+ Y + GL LG
Sbjct: 267 LHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGR 326
Query: 149 AEK---VFDEMRER---------------------------------------NVVSFTA 166
AEK VF EM + + + +
Sbjct: 327 AEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNS 386
Query: 167 MISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERG 226
+I+ YA+ G +D +L +F+ M ERD+ SWNA+I+G QN + + LF EM +
Sbjct: 387 LITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEM------KF 440
Query: 227 YRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLA 286
+ + T+V L AC L +GK IH V ++ S + +LVDMY KCG L
Sbjct: 441 KTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLE 500
Query: 287 LARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNA 346
A++ F+ K + SW +I + HG+ + A+ ++ + + G + P+ V F+ +L++
Sbjct: 501 AAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSG--MEPNHVIFLAVLSS 558
Query: 347 CTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEV 406
C+H G+V+QG F M R++G+EP EH C+VDLL RA R ++A + + P
Sbjct: 559 CSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSID 618
Query: 407 VWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILK 466
V G + + C+ G+T++ + + ++E+ P + G+ + L + + + +WD+V W ++
Sbjct: 619 VLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMR 678
Query: 467 QQKSYKVPGCSWIEIDDQVHQFF 489
K+PG S IE++ + FF
Sbjct: 679 SLGLKKLPGWSKIEMNGKTTTFF 701
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 108/434 (24%), Positives = 181/434 (41%), Gaps = 89/434 (20%)
Query: 51 TLSNLPYARRIFDHLHSPNIYLYTSSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHES 110
L++ Y +HL S + STFS ML N P+ F +P +LK+C
Sbjct: 7 VLNSTKYFNSHINHLSSHGDHKQVLSTFS---SMLANK----LLPDTFTFPSLLKACASL 59
Query: 111 RSTG---AVHAQIVKTGF-------------------------------EQYPIVQTALV 136
+ ++H Q++ GF E+ + TA++
Sbjct: 60 QRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMI 119
Query: 137 DSYSRGLGGLGNAEKVFDEMRERNV----VSFTAMISG---------------------- 170
YSR G +G A + +EMR + + V+ M+SG
Sbjct: 120 GCYSRA-GIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCD 178
Query: 171 ----------YARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVA 220
Y + V A LFD+M +RD+ SWN +I+G G SE ++L M
Sbjct: 179 IAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRM-- 236
Query: 221 LAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYG 280
RG +P+ T +LS G L++G+ +H + K F VD + +L+ MY
Sbjct: 237 ----RGDGL-RPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYL 291
Query: 281 KCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTF 340
KCG + +V E P+K + W MI+ G++E A+ VF +M++ G D+ + +
Sbjct: 292 KCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIAS 351
Query: 341 VGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMS 400
V + +C G + G S + R +G L+ + + G D+++ + M+
Sbjct: 352 V--VASCAQLGSFDLGASVHGYVLR-HGYTLDTPALNSLITMYAKCGHLDKSLVIFERMN 408
Query: 401 MEPDEVVWGSLFNG 414
E D V W ++ +G
Sbjct: 409 -ERDLVSWNAIISG 421
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 211 bits (537), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 101/317 (31%), Positives = 179/317 (56%), Gaps = 11/317 (3%)
Query: 166 AMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAER 225
A++ YA+ A +F+ E+D+ +WN++I+G +QNG E + LF M + +
Sbjct: 382 ALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESV-- 439
Query: 226 GYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDS--FISNSLVDMYGKCG 283
PN VT+ SAC L +G +H Y K F S + +L+D Y KCG
Sbjct: 440 -----TPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCG 494
Query: 284 NLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGL 343
+ AR +F+ +K +W++MI + G + G++ +FE+M++ +P+ TF +
Sbjct: 495 DPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLK--KQQKPNESTFTSI 552
Query: 344 LNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEP 403
L+AC H G+V +G YF M ++Y P +HY C+VD+L RAG ++A++++ M ++P
Sbjct: 553 LSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQP 612
Query: 404 DEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWR 463
D +G+ +GC ++ R DL E KK+L++ P + Y ++++N+Y G+W++ + V
Sbjct: 613 DVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRN 672
Query: 464 ILKQQKSYKVPGCSWIE 480
++KQ+ K+ G S +E
Sbjct: 673 LMKQRGLSKIAGHSTME 689
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 124/497 (24%), Positives = 203/497 (40%), Gaps = 111/497 (22%)
Query: 12 ILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSPNIY 71
+L K +++ L+Q LT G A KLV AR +FD + P+ Y
Sbjct: 50 LLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGF-FGYTKDARLVFDQIPEPDFY 108
Query: 72 LYTSSTFSLFRRMLCNSNPTTT-------------RPNNFIYPHVLKSCHESRSTG---A 115
L+ + R C + + R ++ ++ LK+C E +
Sbjct: 109 LW-----KVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKK 163
Query: 116 VHAQIVKT-GFEQYPIVQTALVDSYSRGLGGLGNAEKVF--------------------- 153
+H Q+VK F+ +V T L+D Y++ G + +A KVF
Sbjct: 164 IHCQLVKVPSFDN--VVLTGLLDMYAK-CGEIKSAHKVFNDITLRNVVCWTSMIAGYVKN 220
Query: 154 ----------DEMRERNVVS---------------------------------------F 164
+ MRE NV+
Sbjct: 221 DLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLV 280
Query: 165 TAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAE 224
T+++ Y + GD+ +A ++F+E D+ W A+I G T NG +E + LF++M +
Sbjct: 281 TSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEI- 339
Query: 225 RGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGN 284
KPN VT+ LS CG L+LG+ +HG K + D+ ++N+LV MY KC
Sbjct: 340 ------KPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIW-DTNVANALVHMYAKCYQ 392
Query: 285 LALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLL 344
A+ VFEM +K + +WNS+I+ F+ +G A+ +F +M V P+GVT L
Sbjct: 393 NRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNS--ESVTPNGVTVASLF 450
Query: 345 NACTHGGLVEQGCSYFEMMTREYGIEPQIEHYG-CLVDLLGRAGRFDEAMEVVRGMSMEP 403
+AC G + G S + + H G L+D + G A + + E
Sbjct: 451 SACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIE-EK 509
Query: 404 DEVVWGSLFNGCKVYGR 420
+ + W ++ G YG+
Sbjct: 510 NTITWSAMIGG---YGK 523
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 110/271 (40%), Gaps = 50/271 (18%)
Query: 80 LFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTG---AVHAQIVKTGFEQYPIVQTALV 136
LF RM N + PN + +C S ++HA VK GF V
Sbjct: 430 LFHRM----NSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVG-- 483
Query: 137 DSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWN 196
TA++ YA+ GD SA +FD + E++ +W+
Sbjct: 484 ----------------------------TALLDFYAKCGDPQSARLIFDTIEEKNTITWS 515
Query: 197 ALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWI 256
A+I G + G + LF EM+ + KPN T LSACGHT M+ GK
Sbjct: 516 AMIGGYGKQGDTIGSLELFEEMLK-------KQQKPNESTFTSILSACGHTGMVNEGKKY 568
Query: 257 HGYVYKNDFFVDSFIS-NSLVDMYGKCGNLALARKVFEMNP-DKGLTSWNSMINCFALHG 314
+YK+ F S +VDM + G L A + E P + + + ++ +H
Sbjct: 569 FSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHS 628
Query: 315 QSEGAIAVFEQMVECGGDVRPDGVTFVGLLN 345
+ + V ++M+ D+ PD ++ L++
Sbjct: 629 RFDLGEIVIKKML----DLHPDDASYYVLVS 655
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 111/319 (34%), Positives = 172/319 (53%), Gaps = 11/319 (3%)
Query: 164 FTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAA 223
TA+I Y + G + SA ++FD +DV +WN +I + G E + L R+M
Sbjct: 265 ITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQM----- 319
Query: 224 ERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCG 283
Y KPN T V LS+C ++ +G+ + + + +D+ + +LVDMY K G
Sbjct: 320 --KYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVG 377
Query: 284 NLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGL 343
L A ++F DK + SW +MI+ + HG + A+ +F +M E VRP+ +TF+ +
Sbjct: 378 LLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVV 437
Query: 344 LNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEP 403
LNAC+HGGLV +G F+ M Y P++EHYGC+VDLLGRAG+ +EA E++R + +
Sbjct: 438 LNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITS 497
Query: 404 DEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWR 463
D W +L C+VYG DL E +L E+ + I+LA + G ++ +
Sbjct: 498 DSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAGNPEKSLDN-- 555
Query: 464 ILKQQKSYKVPGCSWIEID 482
+ K K G S IEI+
Sbjct: 556 --ELNKGRKEAGYSAIEIE 572
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/434 (23%), Positives = 180/434 (41%), Gaps = 68/434 (15%)
Query: 21 HLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSPNIYLYTS----- 75
+ ++ ++ G DF KL+ F ++ ++ YA IF+H+ + N++++ +
Sbjct: 43 EVSRIHGYMVKTGLDKDDFAVSKLLAFSSVL--DIRYASSIFEHVSNTNLFMFNTMIRGY 100
Query: 76 -------STFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTG---AVHAQIVKTGF 125
FS+F ++ + F + LKSC +H +++GF
Sbjct: 101 SISDEPERAFSVFNQL----RAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGF 156
Query: 126 EQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFD 185
VF ++R A+I Y G + A K+FD
Sbjct: 157 -------------------------MVFTDLR-------NALIHFYCVCGKISDARKVFD 184
Query: 186 EMPER-DVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSAC 244
EMP+ D +++ L+ G Q + + LFR M N TL+ LSA
Sbjct: 185 EMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEV-------VVNVSTLLSFLSAI 237
Query: 245 GHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWN 304
L + H K +D + +L+ MYGK G ++ AR++F+ K + +WN
Sbjct: 238 SDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWN 297
Query: 305 SMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMT 364
MI+ +A G E + + QM ++P+ TFVGLL++C + G + +++
Sbjct: 298 CMIDQYAKTGLLEECVWLLRQMKY--EKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLE 355
Query: 365 REYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLA 424
E I LVD+ + G ++A+E+ M + D W ++ +G YG LA
Sbjct: 356 EERIALDAILGTA-LVDMYAKVGLLEKAVEIFNRMK-DKDVKSWTAMISG---YGAHGLA 410
Query: 425 EFAAKKLLEIDPHN 438
A +++ N
Sbjct: 411 REAVTLFNKMEEEN 424
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/322 (35%), Positives = 175/322 (54%), Gaps = 10/322 (3%)
Query: 158 ERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFRE 217
E + + + ++ +A VG++ A KLF +P +D+ +++ LI GC ++GF S LFRE
Sbjct: 374 ELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRE 433
Query: 218 MVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVD 277
++ L + + + L C + L GK IHG K + + + +LVD
Sbjct: 434 LIKLGLD-------ADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVD 486
Query: 278 MYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDG 337
MY KCG + +F+ ++ + SW +I F +G+ E A F +M+ G + P+
Sbjct: 487 MYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIG--IEPNK 544
Query: 338 VTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVR 397
VTF+GLL+AC H GL+E+ S E M EYG+EP +EHY C+VDLLG+AG F EA E++
Sbjct: 545 VTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELIN 604
Query: 398 GMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDE 457
M +EPD+ +W SL C + L A+KLL+ P + L+N Y LG WD+
Sbjct: 605 KMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQ 664
Query: 458 VRNVWRILKQQKSYKVPGCSWI 479
+ V R ++ K G SWI
Sbjct: 665 LSKV-REAAKKLGAKESGMSWI 685
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 193/442 (43%), Gaps = 41/442 (9%)
Query: 14 GKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSPNIYLY 73
GK + +QAH+ G + F A ++ + L A ++FD + NI +
Sbjct: 16 GKVQAFKRGESIQAHVIKQGISQNVFIANNVISM-YVDFRLLSDAHKVFDEMSERNIVTW 74
Query: 74 TS------------STFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCH---ESRSTGAVHA 118
T+ L+RRML + N F+Y VLK+C + + V+
Sbjct: 75 TTMVSGYTSDGKPNKAIELYRRML---DSEEEAANEFMYSAVLKACGLVGDIQLGILVYE 131
Query: 119 QIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVD 178
+I K ++ ++VD Y + G L A F E+ + S+ +ISGY + G +D
Sbjct: 132 RIGKENLRGDVVLMNSVVDMYVKN-GRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMD 190
Query: 179 SALKLFDEMPERDVPSWNALIAGCTQNG---FFSEGIRLFREMVALAAERGYRCNKPNPV 235
A+ LF MP+ +V SWN LI+G G +R+ RE + L +
Sbjct: 191 EAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVL-----------DGF 239
Query: 236 TLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVF--- 292
L C L AC +L +GK +H V K+ F ++L+DMY CG+L A VF
Sbjct: 240 ALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQE 299
Query: 293 EMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGL 352
++ + + WNSM++ F ++ ++E A+ + Q+ + D+ D T G L C +
Sbjct: 300 KLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQ--SDLCFDSYTLSGALKICINYVN 357
Query: 353 VEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLF 412
+ G ++ G E LVDL G +A ++ + D + + L
Sbjct: 358 LRLGLQVHSLVVVS-GYELDYIVGSILVDLHANVGNIQDAHKLFHRLP-NKDIIAFSGLI 415
Query: 413 NGCKVYGRTDLAEFAAKKLLEI 434
GC G LA + ++L+++
Sbjct: 416 RGCVKSGFNSLAFYLFRELIKL 437
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 150/360 (41%), Gaps = 70/360 (19%)
Query: 17 NHLNHLKQLQAH-LTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSPNIYLYT- 74
N++N LQ H L + D+ ++ + N+ A ++F L + +I ++
Sbjct: 354 NYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSG 413
Query: 75 -----------SSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTG---AVHAQI 120
S F LFR ++ + FI ++LK C S G +H
Sbjct: 414 LIRGCVKSGFNSLAFYLFRELI----KLGLDADQFIVSNILKVCSSLASLGWGKQIHGLC 469
Query: 121 VKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSA 180
+K G+E P+ TALVD Y + G + N +FD M ER+VVS+T +I G+ +
Sbjct: 470 IKKGYESEPVTATALVDMYVK-CGEIDNGVVLFDGMLERDVVSWTGIIVGFGQ------- 521
Query: 181 LKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCA 240
NG E R F +M+ + E PN VT +
Sbjct: 522 ------------------------NGRVEEAFRYFHKMINIGIE-------PNKVTFLGL 550
Query: 241 LSACGHTSMLQLGKWIHGYVYKNDFFVDSFISN--SLVDMYGKCGNLALARKVFE---MN 295
LSAC H+ +L+ + K+++ ++ ++ + +VD+ G+ G A ++ +
Sbjct: 551 LSACRHSGLLEEARSTL-ETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLE 609
Query: 296 PDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQ 355
PDK T W S++ H + + E++++ D D + L NA G+ +Q
Sbjct: 610 PDK--TIWTSLLTACGTHKNAGLVTVIAEKLLKGFPD---DPSVYTSLSNAYATLGMWDQ 664
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 142/345 (41%), Gaps = 49/345 (14%)
Query: 96 NNFIYPHVLKSCHES---RSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKV 152
+ F P LK+C +H +VK+G E P +AL+D YS G L A V
Sbjct: 237 DGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSN-CGSLIYAADV 295
Query: 153 FDEMR---ERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFS 209
F + + +V + +M+SG+ + ++AL L ++ + D+ C
Sbjct: 296 FHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDL---------CF------ 340
Query: 210 EGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDS 269
+ TL AL C + L+LG +H V + + +D
Sbjct: 341 -----------------------DSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDY 377
Query: 270 FISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVEC 329
+ + LVD++ GN+ A K+F P+K + +++ +I G + A +F ++++
Sbjct: 378 IVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKL 437
Query: 330 GGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRF 389
G D D +L C+ + G + ++ G E + LVD+ + G
Sbjct: 438 GLD--ADQFIVSNILKVCSSLASLGWGKQIHGLCIKK-GYESEPVTATALVDMYVKCGEI 494
Query: 390 DEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEI 434
D + + GM +E D V W + G GR + A K++ I
Sbjct: 495 DNGVVLFDGM-LERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINI 538
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 86/181 (47%), Gaps = 4/181 (2%)
Query: 237 LVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNP 296
+ L CG + G+ I +V K + FI+N+++ MY L+ A KVF+
Sbjct: 8 IAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMS 67
Query: 297 DKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQG 356
++ + +W +M++ + G+ AI ++ +M++ + + + +L AC G ++ G
Sbjct: 68 ERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANE-FMYSAVLKACGLVGDIQLG 126
Query: 357 CSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNG-C 415
+E + +E + + +VD+ + GR EA + + + P W +L +G C
Sbjct: 127 ILVYERIGKE-NLRGDVVLMNSVVDMYVKNGRLIEANSSFKEI-LRPSSTSWNTLISGYC 184
Query: 416 K 416
K
Sbjct: 185 K 185
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 180/326 (55%), Gaps = 11/326 (3%)
Query: 156 MRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLF 215
+RE + +I+ Y R D++SA+K+F + + ++ SWN +I+ +QN E +LF
Sbjct: 611 LRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLF 670
Query: 216 REMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSL 275
R + +PN +T V LSA G H ++ + F + F+S +L
Sbjct: 671 RNLKL----------EPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAAL 720
Query: 276 VDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRP 335
VDMY CG L KVF + +++WNS+I+ HG E A+ +F+++ ++ P
Sbjct: 721 VDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKEL-SSNSEMEP 779
Query: 336 DGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEV 395
+ +F+ LL+AC+H G +++G SY++ M ++G++P EH +VD+LGRAG+ EA E
Sbjct: 780 NKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEF 839
Query: 396 VRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKW 455
+ G+ VWG+L + C +G T L + A+ L E++P N Y I LAN Y LG W
Sbjct: 840 ITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGW 899
Query: 456 DEVRNVWRILKQQKSYKVPGCSWIEI 481
+E + ++++ K+PG S I++
Sbjct: 900 EEAVRLRKMVEDNALKKLPGYSVIDV 925
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 182/418 (43%), Gaps = 75/418 (17%)
Query: 110 SRSTGAVHAQIVKTGFEQYPI-VQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMI 168
SR AVH V+ + + V +++D Y + G AE +F R++VS+ +MI
Sbjct: 409 SREGRAVHGYTVRMEMQSRALEVINSVIDMYGK-CGLTTQAELLFKTTTHRDLVSWNSMI 467
Query: 169 SGYA-----------------------------------------------------RVG 175
S ++ ++G
Sbjct: 468 SAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLG 527
Query: 176 DVDSALKLFDEMPE-RDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNP 234
D+ SA + M E RD+ SWN++I+GC +G E +R F+ A++ E R +
Sbjct: 528 DLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQ---AMSREGKIR---HDL 581
Query: 235 VTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEM 294
+TL+ +SA G+ ++ G+ HG K+ +D+ + N+L+ MYG+C ++ A KVF +
Sbjct: 582 ITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGL 641
Query: 295 NPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVE 354
D L SWN +I+ + + +F + + P+ +TFVGLL+A T G
Sbjct: 642 ISDPNLCSWNCVISALSQNKAGREVFQLFRNL-----KLEPNEITFVGLLSASTQLGSTS 696
Query: 355 QGC-SYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFN 413
G ++ ++ R + P + LVD+ G + M+V R + W S+ +
Sbjct: 697 YGMQAHCHLIRRGFQANPFVS--AALVDMYSSCGMLETGMKVFRNSGVNSIS-AWNSVIS 753
Query: 414 GCKVYGRTDLAEFAAKKL---LEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQ 468
+G + A K+L E++P+ + I L + G DE + ++ ++++
Sbjct: 754 AHGFHGMGEKAMELFKELSSNSEMEPNKSSF-ISLLSACSHSGFIDEGLSYYKQMEEK 810
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 121/263 (46%), Gaps = 27/263 (10%)
Query: 158 ERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFRE 217
E +V ++IS Y++ GD ++A +F+E+ RDV S NA++ G NG F E + +
Sbjct: 323 EAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQ 382
Query: 218 MVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSF-ISNSLV 276
M ++ +P+ T+V S CG S + G+ +HGY + + + + NS++
Sbjct: 383 MQSVDK------IQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVI 436
Query: 277 DMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPD 336
DMYGKCG A +F+ + L SWNSMI+ F+ +G + A +F+++V +
Sbjct: 437 DMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFS 496
Query: 337 GVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVV 396
T + +L +C + G S C L + G A +
Sbjct: 497 LSTVLAILTSCDSSDSLIFGKSVH-----------------C---WLQKLGDLTSAFLRL 536
Query: 397 RGMSMEPDEVVWGSLFNGCKVYG 419
MS D W S+ +GC G
Sbjct: 537 ETMSETRDLTSWNSVISGCASSG 559
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 125/258 (48%), Gaps = 13/258 (5%)
Query: 159 RNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREM 218
+++ + + +++ Y R G++ S+ LFDE+ E+DV WN++I QNG + + LF EM
Sbjct: 120 QDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEM 179
Query: 219 VALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDM 278
+ ++ N+ + TL+ A SA + + +H + DS + N+L+++
Sbjct: 180 I-------HKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNL 232
Query: 279 YGKCGNLALARKVFEMNPDKGLTSWNS-MINCFALHGQSEGAIAVFEQMVECGGDVRPDG 337
Y K NL+ A VF + + SWN+ M C A +G ++ F+ M G + D
Sbjct: 233 YAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLA-NGHPRKSLQYFKSMTGSGQE--ADT 289
Query: 338 VTFVGLLNACTHGGLVEQGCSYFEMMTRE-YGIEPQIEHYGCLVDLLGRAGRFDEAMEVV 396
VTF +++AC+ + G S ++ + Y E + ++ + + G EA E V
Sbjct: 290 VTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGD-TEAAETV 348
Query: 397 RGMSMEPDEVVWGSLFNG 414
+ D + ++ NG
Sbjct: 349 FEELVCRDVISSNAILNG 366
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 16/149 (10%)
Query: 78 FSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTG---AVHAQIVKTGFEQYPIVQTA 134
F LFR + PN + +L + + ST H +++ GF+ P V A
Sbjct: 667 FQLFRNL-------KLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAA 719
Query: 135 LVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMP-----E 189
LVD YS G L KVF ++ ++ ++IS + G + A++LF E+ E
Sbjct: 720 LVDMYS-SCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEME 778
Query: 190 RDVPSWNALIAGCTQNGFFSEGIRLFREM 218
+ S+ +L++ C+ +GF EG+ +++M
Sbjct: 779 PNKSSFISLLSACSHSGFIDEGLSYYKQM 807
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 209 bits (531), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 124/436 (28%), Positives = 219/436 (50%), Gaps = 58/436 (13%)
Query: 58 ARRIFDHLHSPNIYLYTS--STFS---LFRRML----CNSNPTTTRPNNFIYPHVLKSCH 108
ARR+FD + P++ +T+ S FS L+ L P+ + VL +C
Sbjct: 217 ARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACG 276
Query: 109 ESRSTGA---VHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFT 165
R +H +++ G +V+++L+D Y
Sbjct: 277 NLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMY-------------------------- 310
Query: 166 AMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAER 225
+ G V A ++F+ M +++ SW+AL+ G QNG + I +FREM E+
Sbjct: 311 ------GKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREM----EEK 360
Query: 226 GYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNL 285
C L AC + ++LGK IHG + F + + ++L+D+YGK G +
Sbjct: 361 DLYC-------FGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCI 413
Query: 286 ALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLN 345
A +V+ + + +WN+M++ A +G+ E A++ F MV+ G ++PD ++F+ +L
Sbjct: 414 DSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKG--IKPDYISFIAILT 471
Query: 346 ACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDE 405
AC H G+V++G +YF +M + YGI+P EHY C++DLLGRAG F+EA ++ D
Sbjct: 472 ACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDA 531
Query: 406 VVWGSLFNGCKVYG-RTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRI 464
+WG L C + +AE AK+++E++P ++L+N+Y +G+ + N+ ++
Sbjct: 532 SLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKL 591
Query: 465 LKQQKSYKVPGCSWIE 480
+ ++ K G SWI+
Sbjct: 592 MVRRGVAKTVGQSWID 607
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 169/398 (42%), Gaps = 77/398 (19%)
Query: 95 PNNFIYPHVLKSCHE---SRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEK 151
N F +K+C E R H ++ GFE + + L Y + +A +
Sbjct: 161 ANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPV-DARR 219
Query: 152 VFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEG 211
VFDEM E +V+ +TA++S +++ N + E
Sbjct: 220 VFDEMPEPDVICWTAVLSAFSK-------------------------------NDLYEEA 248
Query: 212 IRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFI 271
+ LF M RG + P+ T L+ACG+ L+ GK IHG + N + +
Sbjct: 249 LGLFYAM-----HRG-KGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVV 302
Query: 272 SNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGG 331
+SL+DMYGKCG++ AR+VF K SW++++ + +G+ E AI +F +M E
Sbjct: 303 ESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEE--- 359
Query: 332 DVRPDGVTFVGLLNACT-----------HGGLVEQGCSYFEMMTREYGIEPQIEHYGCLV 380
D F +L AC HG V +GC F + E L+
Sbjct: 360 ---KDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGC--FGNVIVE----------SALI 404
Query: 381 DLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLE--IDPHN 438
DL G++G D A V MS+ + + W ++ + GR + A +++ I P
Sbjct: 405 DLYGKSGCIDSASRVYSKMSIR-NMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDY 463
Query: 439 GGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKV-PG 475
+ I + G G DE RN + ++ KSY + PG
Sbjct: 464 ISF-IAILTACGHTGMVDEGRNYFVLM--AKSYGIKPG 498
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 152/336 (45%), Gaps = 46/336 (13%)
Query: 83 RMLCNSNPTTTRPNNFIYPHVLKSCHESRS---TGAVHAQIVKTGFEQYPIVQTALVDSY 139
R+L +++ + +Y +L++C++ S HA +VK+G E V +L+ Y
Sbjct: 47 RILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLY 106
Query: 140 SRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALI 199
K+ MRE ++FD +D SW +++
Sbjct: 107 F----------KLGPGMRETR---------------------RVFDGRFVKDAISWTSMM 135
Query: 200 AGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGY 259
+G + + +F EMV+ + N TL A+ AC ++LG+ HG
Sbjct: 136 SGYVTGKEHVKALEVFVEMVSFGLD-------ANEFTLSSAVKACSELGEVRLGRCFHGV 188
Query: 260 VYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGA 319
V + F + FIS++L +YG AR+VF+ P+ + W ++++ F+ + E A
Sbjct: 189 VITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEA 248
Query: 320 IAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCS-YFEMMTREYGIEPQIEHYGC 378
+ +F M G V PDG TF +L AC + ++QG + +++T G +E
Sbjct: 249 LGLFYAMHRGKGLV-PDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVE--SS 305
Query: 379 LVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNG 414
L+D+ G+ G EA +V GMS + + V W +L G
Sbjct: 306 LLDMYGKCGSVREARQVFNGMS-KKNSVSWSALLGG 340
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 108/262 (41%), Gaps = 35/262 (13%)
Query: 9 VLTILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSP 68
VLT G L K++ L T G L+ ++ AR++F+ +
Sbjct: 271 VLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYG-KCGSVREARQVFNGMSKK 329
Query: 69 NIYLYTS------------STFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCH---ESRST 113
N +++ +FR M + + + VLK+C R
Sbjct: 330 NSVSWSALLGGYCQNGEHEKAIEIFREM--------EEKDLYCFGTVLKACAGLAAVRLG 381
Query: 114 GAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYAR 173
+H Q V+ G IV++AL+D Y + G + +A +V+ +M RN++++ AM+S A+
Sbjct: 382 KEIHGQYVRRGCFGNVIVESALIDLYGKS-GCIDSASRVYSKMSIRNMITWNAMLSALAQ 440
Query: 174 VGDVDSALKLFDEMPER----DVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRC 229
G + A+ F++M ++ D S+ A++ C G EG F V +A G
Sbjct: 441 NGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYF---VLMAKSYGI-- 495
Query: 230 NKPNPVTLVCALSACGHTSMLQ 251
KP C + G + +
Sbjct: 496 -KPGTEHYSCMIDLLGRAGLFE 516
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 154/586 (26%), Positives = 265/586 (45%), Gaps = 87/586 (14%)
Query: 5 LNEQVLTILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLS--NLPYARRIF 62
LNE +L + S++L + + AHL + A+++ L + AR++F
Sbjct: 34 LNE-LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLF 92
Query: 63 DHLHSPNIYL-------YTSSTF-----SLFRRMLCNSNPTTTRPNNFIYPHVLKSCHES 110
D + N+ Y +S F LF+ M + +RPN F+ V KSC S
Sbjct: 93 DLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGE---SRPNEFVATVVFKSCSNS 149
Query: 111 ---RSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAM 167
H +K G + V+ LV YS G G A +V D++ ++ F++
Sbjct: 150 GRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGN-GEAIRVLDDLPYCDLSVFSSA 208
Query: 168 ISGYARVGDVD----------------------SALKLFDEMPERDVP----------SW 195
+SGY G S+L+LF + + ++ +
Sbjct: 209 LSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGF 268
Query: 196 NALIAGC------------------------TQNGFFSEGI-------RLFREMVALAAE 224
NA + C QN F + I + F E + L ++
Sbjct: 269 NAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSK 328
Query: 225 RGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGN 284
+ PN T L++ S+L+ G +HG V K+ + + N+LV+MY K G+
Sbjct: 329 MDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGS 388
Query: 285 LALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLL 344
+ ARK F + + +WN+MI+ + HG A+ F++M+ G P+ +TF+G+L
Sbjct: 389 IEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEI--PNRITFIGVL 446
Query: 345 NACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPD 404
AC+H G VEQG YF + +++ ++P I+HY C+V LL +AG F +A + +R +E D
Sbjct: 447 QACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWD 506
Query: 405 EVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRI 464
V W +L N C V L + A+ +E P++ G ++L+N++ + +W+ V V +
Sbjct: 507 VVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSL 566
Query: 465 LKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESLIG 510
+ + K PG SWI I +Q H F + D P+ +Y+ ++ ++
Sbjct: 567 MNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMS 612
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 146/531 (27%), Positives = 256/531 (48%), Gaps = 59/531 (11%)
Query: 1 MKPN--LNEQVLTILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYA 58
++PN +L++ L+ KQ+ + +G + LV ++ A
Sbjct: 321 LQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEA 380
Query: 59 RRIFDHLHSPNIYLYTSSTFSLFRR--------MLCNSNPTTTRPNNFIYPHVLKSCHES 110
R+F + SPN+ +T+ L +L PN VL++C +
Sbjct: 381 SRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKL 440
Query: 111 RSTGAV---HAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAM 167
R V HA +++ + +V +LVD+Y+ + A V M+ R+ +++T++
Sbjct: 441 RHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASS-RKVDYAWNVIRSMKRRDNITYTSL 499
Query: 168 ISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGY 227
++ + +G + AL + + M + +GIR+
Sbjct: 500 VTRFNELGKHEMALSVINYM--------------------YGDGIRM------------- 526
Query: 228 RCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLAL 287
+ ++L +SA + L+ GK +H Y K+ F + + NSLVDMY KCG+L
Sbjct: 527 -----DQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLED 581
Query: 288 ARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNAC 347
A+KVFE + SWN +++ A +G A++ FE+M + PD VTF+ LL+AC
Sbjct: 582 AKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRM--KETEPDSVTFLILLSAC 639
Query: 348 THGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVV 407
++G L + G YF++M + Y IEPQ+EHY LV +LGRAGR +EA VV M ++P+ ++
Sbjct: 640 SNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMI 699
Query: 408 WGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQ 467
+ +L C+ G L E A K L + P + I+LA++Y E GK + + ++ +
Sbjct: 700 FKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTE 759
Query: 468 QKSYKVPGCSWIEIDDQVHQFFS-----LDQSSPKAEELYSVLESLIGFGN 513
++ K G S +E+ +VH F S +D+++ E+ S+ E + FG+
Sbjct: 760 KRLSKKLGKSTVEVQGKVHSFVSEDVTRVDKTNGIYAEIESIKEEIKRFGS 810
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/447 (24%), Positives = 176/447 (39%), Gaps = 64/447 (14%)
Query: 13 LGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSPNIYL 72
GK+ H N + + L + DFY+ S + A R+ + +++L
Sbjct: 242 FGKTIHSNIIVRGIPLNVVLKTSLVDFYS---------QFSKMEDAVRVLNSSGEQDVFL 292
Query: 73 YTSSTFSLFRRMLCNSNPTT--------TRPNNFIYPHVLKSCHESRSTG---AVHAQIV 121
+TS R + T +PNNF Y +L C RS +H+Q +
Sbjct: 293 WTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTI 352
Query: 122 KTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSAL 181
K GFE V ALVD Y + A +VF M NVVS+T +I G G V
Sbjct: 353 KVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCF 412
Query: 182 KLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCAL 241
L EM +R+V +PN VTL L
Sbjct: 413 GLLMEMVKREV--------------------------------------EPNVVTLSGVL 434
Query: 242 SACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLT 301
AC ++ IH Y+ + + + NSLVD Y + A V +
Sbjct: 435 RACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNI 494
Query: 302 SWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFE 361
++ S++ F G+ E A++V M G +R D ++ G ++A + G +E G +
Sbjct: 495 TYTSLVTRFNELGKHEMALSVINYMY--GDGIRMDQLSLPGFISASANLGALETG-KHLH 551
Query: 362 MMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYG-- 419
+ + G LVD+ + G ++A +V ++ PD V W L +G G
Sbjct: 552 CYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIAT-PDVVSWNGLVSGLASNGFI 610
Query: 420 RTDLAEFAAKKLLEIDPHNGGYGIMLA 446
+ L+ F ++ E +P + + I+L+
Sbjct: 611 SSALSAFEEMRMKETEPDSVTFLILLS 637
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 131/282 (46%), Gaps = 14/282 (4%)
Query: 167 MISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERG 226
++S Y + + +A KLFDEM R V +W +I+ T++ F+ + LF EM+A
Sbjct: 64 LLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTH-- 121
Query: 227 YRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLA 286
PN T + +C + G +HG V K F +S + +SL D+Y KCG
Sbjct: 122 -----PNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFK 176
Query: 287 LARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNA 346
A ++F + SW MI+ + A+ + +MV+ G V P+ TFV LL A
Sbjct: 177 EACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAG--VPPNEFTFVKLLGA 234
Query: 347 CTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEV 406
+ GL + ++ R GI + LVD + + ++A+ V+ S E D
Sbjct: 235 SSFLGLEFGKTIHSNIIVR--GIPLNVVLKTSLVDFYSQFSKMEDAVRVLNS-SGEQDVF 291
Query: 407 VWGSLFNGC--KVYGRTDLAEFAAKKLLEIDPHNGGYGIMLA 446
+W S+ +G + + + F + L + P+N Y +L+
Sbjct: 292 LWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILS 333
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/429 (22%), Positives = 173/429 (40%), Gaps = 77/429 (17%)
Query: 58 ARRIFDHLHSPNIYLYT------------SSTFSLFRRMLCNSNPTTTRPNNFIYPHVLK 105
AR++FD + ++ +T +S SLF M+ + T PN F + V++
Sbjct: 77 ARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASG----THPNEFTFSSVVR 132
Query: 106 SCHESRST---GAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVV 162
SC R G VH ++KTGFE +V ++L D YS+
Sbjct: 133 SCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSK--------------------- 171
Query: 163 SFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALA 222
G A +LF + D SW +I+ + E ++ + EMV
Sbjct: 172 -----------CGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAG 220
Query: 223 AERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKC 282
PN T V L A L+ GK IH + ++ + SLVD Y +
Sbjct: 221 V-------PPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQF 272
Query: 283 GNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVG 342
+ A +V + ++ + W S+++ F + +++ A+ F +M G ++P+ T+
Sbjct: 273 SKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLG--LQPNNFTYSA 330
Query: 343 LLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSME 402
+L+ C+ ++ G T + G E + LVD+ + + V G +
Sbjct: 331 ILSLCSAVRSLDFG-KQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVS 389
Query: 403 PDEVVWGSLFNGCKVYGRTD-----LAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDE 457
P+ V W +L G +G L E + E++P+ + + G L +
Sbjct: 390 PNVVSWTTLILGLVDHGFVQDCFGLLMEMVKR---EVEPN-------VVTLSGVLRACSK 439
Query: 458 VRNVWRILK 466
+R+V R+L+
Sbjct: 440 LRHVRRVLE 448
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 77/174 (44%), Gaps = 17/174 (9%)
Query: 241 LSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGL 300
LS C S ++G IH V K + + N+L+ +Y K + ARK+F+ + +
Sbjct: 31 LSFCESNSS-RIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTV 89
Query: 301 TSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNAC------THGGLVE 354
+W MI+ F + A+++FE+M+ G P+ TF ++ +C ++GG V
Sbjct: 90 FAWTVMISAFTKSQEFASALSLFEEMMASG--THPNEFTFSSVVRSCAGLRDISYGGRVH 147
Query: 355 QGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVW 408
+ G E L DL + G+F EA E+ + D + W
Sbjct: 148 GS-------VIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQ-NADTISW 193
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 133/455 (29%), Positives = 222/455 (48%), Gaps = 64/455 (14%)
Query: 61 IFDHLHSPNIYLYTS------------STFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCH 108
+F +H+PN+ + S ++RR+L S P RP+ + + + +
Sbjct: 357 VFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTP---RPDEYTFSAAISATA 413
Query: 109 ESRS---TGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFT 165
E +H Q+ K G+E R+V T
Sbjct: 414 EPERFVHGKLLHGQVTKLGYE--------------------------------RSVFVGT 441
Query: 166 AMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAER 225
++S Y + + +SA K+FD M ERDV W +I G ++ G ++ F EM
Sbjct: 442 TLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEM------- 494
Query: 226 GYR-CNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGN 284
YR N+ + +L + AC +ML+ G+ H + F + +LVDMYGK G
Sbjct: 495 -YREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGK 553
Query: 285 LALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLL 344
A +F + + L WNSM+ ++ HG E A++ FEQ++E G PD VT++ LL
Sbjct: 554 YETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENG--FMPDAVTYLSLL 611
Query: 345 NACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPD 404
AC+H G QG + M +E GI+ +HY C+V+L+ +AG DEA+E++ +
Sbjct: 612 AACSHRGSTLQGKFLWNQM-KEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNN 670
Query: 405 EV-VWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWR 463
+ +W +L + C + +AA+++L++DP + I+L+N+Y G+W++V + R
Sbjct: 671 QAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRR 730
Query: 464 ILKQQKSYKVPGCSWIEIDDQVHQFFSL-DQSSPK 497
++ S K PG SWIE+++ Q FS DQS+P+
Sbjct: 731 KIRGLASSKDPGLSWIEVNNNNTQVFSSGDQSNPE 765
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 176/420 (41%), Gaps = 56/420 (13%)
Query: 19 LNHLKQLQAHLTTLGH--AHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSPNIYLYTS- 75
L +Q+ A + T G A YA + + +L AR++FD + N+ Y +
Sbjct: 110 LKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNAL 169
Query: 76 -STFSLFRRMLCNSNPTTT-------RPNNFIYPHVLKSC---HESRSTGAVHAQIVKTG 124
S +S + P TT +PN+ + +++ C + ++++QI+K G
Sbjct: 170 YSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLG 229
Query: 125 FEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLF 184
+ +VQT+++ YS GD++SA ++F
Sbjct: 230 YSDNVVVQTSVLGMYSS--------------------------------CGDLESARRIF 257
Query: 185 DEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSAC 244
D + RD +WN +I G +N +G+ FR M+ + P T L+ C
Sbjct: 258 DCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVD-------PTQFTYSIVLNGC 310
Query: 245 GHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWN 304
LGK IH + +D D + N+L+DMY CG++ A VF + L SWN
Sbjct: 311 SKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWN 370
Query: 305 SMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMT 364
S+I+ + +G E A+ ++ +++ RPD TF ++A G +T
Sbjct: 371 SIISGCSENGFGEQAMLMYRRLLRMSTP-RPDEYTFSAAISATAEPERFVHGKLLHGQVT 429
Query: 365 REYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLA 424
+ G E + L+ + + + A +V M E D V+W + G G ++LA
Sbjct: 430 K-LGYERSVFVGTTLLSMYFKNREAESAQKVFDVMK-ERDVVLWTEMIVGHSRLGNSELA 487
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 124/269 (46%), Gaps = 12/269 (4%)
Query: 167 MISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERG 226
+IS Y R G ++ A K+FD+MP R+V S+NAL + ++N F+ L
Sbjct: 138 LISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFAS------YAFPLTTHMA 191
Query: 227 YRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLA 286
+ KPN T + C + +G ++ + K + + + S++ MY CG+L
Sbjct: 192 FEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLE 251
Query: 287 LARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNA 346
AR++F+ ++ +WN+MI + + E + F M+ G D P T+ +LN
Sbjct: 252 SARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVD--PTQFTYSIVLNG 309
Query: 347 CTHGGLVEQG-CSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDE 405
C+ G G + ++ + + +++ L+D+ G EA V G P+
Sbjct: 310 CSKLGSYSLGKLIHARIIVSDSLADLPLDN--ALLDMYCSCGDMREAFYVF-GRIHNPNL 366
Query: 406 VVWGSLFNGCKVYGRTDLAEFAAKKLLEI 434
V W S+ +GC G + A ++LL +
Sbjct: 367 VSWNSIISGCSENGFGEQAMLMYRRLLRM 395
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 130/297 (43%), Gaps = 16/297 (5%)
Query: 167 MISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERG 226
+IS Y R ++ A K+FD+MP+R++ + L A + S G L +++ L + +
Sbjct: 28 LISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFE---YVSMGSSLHSQIIKLGSFQM 84
Query: 227 YRCNKPNPV--TLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDS---FISNSLVDMYGK 281
N + ++V C ++L+ + IH V + + +N+L+ MY +
Sbjct: 85 IFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVR 144
Query: 282 CGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGD-VRPDGVTF 340
CG+L ARKVF+ P + + S+N++ + ++ + + A F + V+P+ TF
Sbjct: 145 CGSLEQARKVFDKMPHRNVVSYNALYSAYSRN--PDFASYAFPLTTHMAFEYVKPNSSTF 202
Query: 341 VGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMS 400
L+ C V G S + + G + ++ + G + A + ++
Sbjct: 203 TSLVQVCAVLEDVLMGSSLNSQIIK-LGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVN 261
Query: 401 MEPDEVVWGSLFNGCKVYGRTD--LAEFAAKKLLEIDPHNGGYGIMLANVYGELGKW 455
D V W ++ G + + L F + +DP Y I+L N +LG +
Sbjct: 262 -NRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVL-NGCSKLGSY 316
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 98/227 (43%), Gaps = 25/227 (11%)
Query: 21 HLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSN--LPYARRIFDHLHSPNIYLYTSSTF 78
H K L +T LG+ + F L+ ++ N A+++FD + ++ L+T
Sbjct: 420 HGKLLHGQVTKLGYERSVFVGTTLL---SMYFKNREAESAQKVFDVMKERDVVLWTEMIV 476
Query: 79 SLFRRMLCNSNPTT----------TRPNNFIYPHVLKSCHES---RSTGAVHAQIVKTGF 125
R L NS R + F V+ +C + R H ++TGF
Sbjct: 477 GHSR--LGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGF 534
Query: 126 EQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFD 185
+ V ALVD Y + G AE +F ++ + +M+ Y++ G V+ AL F+
Sbjct: 535 DCVMSVCGALVDMYGKN-GKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFE 593
Query: 186 EMPER----DVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYR 228
++ E D ++ +L+A C+ G +G L+ +M + G++
Sbjct: 594 QILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQGIKAGFK 640
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 122/403 (30%), Positives = 209/403 (51%), Gaps = 36/403 (8%)
Query: 94 RPNNFIYPHVLKSCHESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVF 153
RP+ F +LK+C STG ++A GF +V++ S + G
Sbjct: 207 RPDEFTLTSLLKAC---SSTGMIYAGKQIHGF----LVRSGFHCPSSATITG-------- 251
Query: 154 DEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIR 213
+++ Y + G + SA K FD++ E+ + SW++LI G Q G F E +
Sbjct: 252 ------------SLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMG 299
Query: 214 LFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISN 273
LF+ + L ++ + L + ++L+ GK + K +++ + N
Sbjct: 300 LFKRLQELNSQ-------IDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLN 352
Query: 274 SLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDV 333
S+VDMY KCG + A K F K + SW +I + HG + ++ +F +M+ ++
Sbjct: 353 SVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLR--HNI 410
Query: 334 RPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAM 393
PD V ++ +L+AC+H G++++G F + +GI+P++EHY C+VDLLGRAGR EA
Sbjct: 411 EPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAK 470
Query: 394 EVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELG 453
++ M ++P+ +W +L + C+V+G +L + K LL ID N +M++N+YG+ G
Sbjct: 471 HLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAG 530
Query: 454 KWDEVRNVWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSP 496
W+E N + + K G SW+EI+ +VH F S + S P
Sbjct: 531 YWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHP 573
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/279 (33%), Positives = 127/279 (45%), Gaps = 9/279 (3%)
Query: 160 NVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMV 219
N+++ +I Y + + A K+FD MPER+V SW+AL++G NG + LF EM
Sbjct: 40 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEM- 98
Query: 220 ALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMY 279
G + PN T L ACG + L+ G IHG+ K F + + NSLVDMY
Sbjct: 99 ------GRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMY 152
Query: 280 GKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVT 339
KCG + A KVF D+ L SWN+MI F G A+ F M E RPD T
Sbjct: 153 SKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFT 212
Query: 340 FVGLLNACTHGGLVEQGCSYFEMMTRE-YGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRG 398
LL AC+ G++ G + R + G LVDL + G A +
Sbjct: 213 LTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQ 272
Query: 399 MSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPH 437
+ E + W SL G G A K+L E++
Sbjct: 273 IK-EKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQ 310
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/399 (26%), Positives = 172/399 (43%), Gaps = 67/399 (16%)
Query: 58 ARRIFDHLHSPNIYLYTS------------STFSLFRRMLCNSNPTTTRPNNFIYPHVLK 105
A ++FD + N+ +++ + SLF M PN F + LK
Sbjct: 60 AYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEM----GRQGIYPNEFTFSTNLK 115
Query: 106 SC---HESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVV 162
+C + +H +K GFE V +LVD YS+ G + AEKVF + +R+++
Sbjct: 116 ACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSK-CGRINEAEKVFRRIVDRSLI 174
Query: 163 SFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALA 222
S+ AMI+G+ G AL F M E ++
Sbjct: 175 SWNAMIAGFVHAGYGSKALDTFGMMQEANIK----------------------------- 205
Query: 223 AERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDS--FISNSLVDMYG 280
+P+ TL L AC T M+ GK IHG++ ++ F S I+ SLVD+Y
Sbjct: 206 -------ERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYV 258
Query: 281 KCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTF 340
KCG L ARK F+ +K + SW+S+I +A G+ A+ +F+++ E + D
Sbjct: 259 KCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQI--DSFAL 316
Query: 341 VGLLNACTHGGLVEQGCSYFEMMTR-EYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGM 399
++ L+ QG + + G+E + +VD+ + G DEA + M
Sbjct: 317 SSIIGVFADFALLRQGKQMQALAVKLPSGLETSV--LNSVVDMYLKCGLVDEAEKCFAEM 374
Query: 400 SMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHN 438
++ D + W + G YG+ L + + + E+ HN
Sbjct: 375 QLK-DVISWTVVITG---YGKHGLGKKSVRIFYEMLRHN 409
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 91/178 (51%), Gaps = 4/178 (2%)
Query: 237 LVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNP 296
LV L C + G +H Y+ K+ ++ SN L+DMY KC +A KVF+ P
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68
Query: 297 DKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQG 356
++ + SW+++++ L+G +G++++F +M G + P+ TF L AC +E+G
Sbjct: 69 ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQG--IYPNEFTFSTNLKACGLLNALEKG 126
Query: 357 CSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNG 414
+ G E +E LVD+ + GR +EA +V R + ++ + W ++ G
Sbjct: 127 LQIHGFCLK-IGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI-VDRSLISWNAMIAG 182
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 206 bits (523), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 135/470 (28%), Positives = 228/470 (48%), Gaps = 56/470 (11%)
Query: 55 LPYARRIFDHLHSPNIYLYT---SSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKS--CHE 109
L + +F + N+ +T SS + N PN + ++ + C+E
Sbjct: 327 LEAVKSVFHQMSERNVVSWTTMISSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNE 386
Query: 110 SRSTG-AVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMI 168
G +H +KTGF P V GN+ I
Sbjct: 387 QIKEGLKIHGLCIKTGFVSEPSV---------------GNS-----------------FI 414
Query: 169 SGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYR 228
+ YA+ ++ A K F+++ R++ SWNA+I+G QNGF E +++F ++ AAE
Sbjct: 415 TLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMF---LSAAAE---- 467
Query: 229 CNKPNPVTLVCALSACGHTSMLQL--GKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLA 286
PN T L+A + + G+ H ++ K +S++L+DMY K GN+
Sbjct: 468 -TMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNID 526
Query: 287 LARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNA 346
+ KVF K W S+I+ ++ HG E + +F +M++ +V PD VTF+ +L A
Sbjct: 527 ESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIK--ENVAPDLVTFLSVLTA 584
Query: 347 CTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEV 406
C G+V++G F MM Y +EP EHY C+VD+LGRAGR EA E++ + P E
Sbjct: 585 CNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGES 644
Query: 407 VWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILK 466
+ S+ C+++G + A+ +E+ P G + + N+Y E +WD+ + + ++
Sbjct: 645 MLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMR 704
Query: 467 QQKSYKVPGCSWIEIDD-----QVHQFFSLDQSSPKAEELYSVLESLIGF 511
++ K G SWI++ D + F S D+S PK++E+Y ++E +IG
Sbjct: 705 KKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVE-IIGL 753
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 154/355 (43%), Gaps = 60/355 (16%)
Query: 158 ERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFS-EGIRLFR 216
E ++V + I+ Y+R G A ++FDEM +D+ SWN+L++G +Q G F E + +FR
Sbjct: 206 ESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFR 265
Query: 217 EMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLV 276
+M+ E + V+ ++ C H + L+L + IHG K + + N L+
Sbjct: 266 DMMREGVELDH-------VSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILM 318
Query: 277 DMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPD 336
Y KCG L + VF ++ + SW +MI+ + A+++F M G V P+
Sbjct: 319 SRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS-----SNKDDAVSIFLNMRFDG--VYPN 371
Query: 337 GVTFVGLLNA----------------CTHGGLVEQ---GCSYFEMMTREYGIEP------ 371
VTFVGL+NA C G V + G S+ + + +E
Sbjct: 372 EVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFE 431
Query: 372 -----QIEHYGCLVDLLGRAGRFDEAMEVVRGMSME--PDEVVWGSLFNGCKVYGRTDLA 424
+I + ++ + G EA+++ + E P+E +GS+ N
Sbjct: 432 DITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMPNEYTFGSVLNAIAF-----AE 486
Query: 425 EFAAKKLLEIDPHNGGYGI--------MLANVYGELGKWDEVRNVWRILKQQKSY 471
+ + K+ H G+ L ++Y + G DE V+ + Q+ +
Sbjct: 487 DISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQF 541
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 118/255 (46%), Gaps = 19/255 (7%)
Query: 167 MISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERG 226
++S Y++ G +++ +F +M ER+V SW +I+ + + +F M
Sbjct: 317 LMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKD-----DAVSIFLNM-------R 364
Query: 227 YRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLA 286
+ PN VT V ++A ++ G IHG K F + + NS + +Y K L
Sbjct: 365 FDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALE 424
Query: 287 LARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNA 346
A+K FE + + SWN+MI+ FA +G S A+ +F + + P+ TF +LNA
Sbjct: 425 DAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMF---LSAAAETMPNEYTFGSVLNA 481
Query: 347 CTHGG--LVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPD 404
V+QG + + G+ L+D+ + G DE+ +V MS + +
Sbjct: 482 IAFAEDISVKQGQRCHAHLLK-LGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMS-QKN 539
Query: 405 EVVWGSLFNGCKVYG 419
+ VW S+ + +G
Sbjct: 540 QFVWTSIISAYSSHG 554
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 109/253 (43%), Gaps = 17/253 (6%)
Query: 166 AMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGF-FSEGIRLFREMVALAAE 224
A++ Y + G D+AL +F+ + + DV SWN +++G N + +R+ V A
Sbjct: 116 AVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQIALNFVVRMKSAGVVFDA- 174
Query: 225 RGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGN 284
T ALS C + LG + V K D + NS + MY + G+
Sbjct: 175 ----------FTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGS 224
Query: 285 LALARKVFEMNPDKGLTSWNSMINCFALHGQ-SEGAIAVFEQMVECGGDVRPDGVTFVGL 343
AR+VF+ K + SWNS+++ + G A+ +F M+ G V D V+F +
Sbjct: 225 FRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREG--VELDHVSFTSV 282
Query: 344 LNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEP 403
+ C H ++ + + G E +E L+ + G + V MS E
Sbjct: 283 ITTCCHETDLKLARQIHGLCIKR-GYESLLEVGNILMSRYSKCGVLEAVKSVFHQMS-ER 340
Query: 404 DEVVWGSLFNGCK 416
+ V W ++ + K
Sbjct: 341 NVVSWTTMISSNK 353
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 104/241 (43%), Gaps = 14/241 (5%)
Query: 180 ALKLFDEMPERD-VPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLV 238
A KLFD +R+ S N I+ + + + +F+E + L GY + VTL
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQL----GYFGRHMDEVTLC 82
Query: 239 CALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDK 298
AL AC L+ G IHG+ + F +SN+++ MY K G A +FE D
Sbjct: 83 LALKAC--RGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDP 140
Query: 299 GLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCS 358
+ SWN++++ F ++ A+ +M G V D T+ L+ C G
Sbjct: 141 DVVSWNTILSGF---DDNQIALNFVVRMKSAG--VVFDAFTYSTALSFCVGSEGFLLGLQ 195
Query: 359 YFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVY 418
+ + G+E + + + R+G F A V MS + D + W SL +G
Sbjct: 196 LQSTVVKT-GLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFK-DMISWNSLLSGLSQE 253
Query: 419 G 419
G
Sbjct: 254 G 254
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 205 bits (521), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 129/426 (30%), Positives = 205/426 (48%), Gaps = 66/426 (15%)
Query: 116 VHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVG 175
VHA ++K G E I +TAL+D YS+ G L ++ +VF+ + E+++VS+ A++SG+ R G
Sbjct: 106 VHALMIKQGAETGTISKTALIDMYSK-YGHLVDSVRVFESVEEKDLVSWNALLSGFLRNG 164
Query: 176 DVDSALKLFDEMPERDVP----SWNALIAGCTQNGFFSEGIRLF-------REMVALAA- 223
AL +F M V + ++++ C +G ++ R++V L
Sbjct: 165 KGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDLVVLGTA 224
Query: 224 ---------------------------------------ERGYR-------CNKPNPVTL 237
R Y+ +PN L
Sbjct: 225 MISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQRPNVRVL 284
Query: 238 VCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPD 297
+L+ C S L +GK IH +N F DS + N L+DMYGKCG + AR +F P
Sbjct: 285 SSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPS 344
Query: 298 KGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGC 357
K + SW SMI+ +A++G A+ +F +M E G V P+ VTF+ +++AC H GLV++G
Sbjct: 345 KSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGK 404
Query: 358 SYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDE-----VVWGSLF 412
F MM +Y + P EHY C +D+L +AG +E +V M ME D +W ++
Sbjct: 405 ECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERM-MENDNQSIPCAIWVAVL 463
Query: 413 NGCKVYGRTDLAEFAAKKLL-EIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSY 471
+ C + E+ A++L+ E P N ++++N Y +GKWD V + LK +
Sbjct: 464 SACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLV 523
Query: 472 KVPGCS 477
K G S
Sbjct: 524 KTAGHS 529
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 120/263 (45%), Gaps = 22/263 (8%)
Query: 156 MRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLF 215
++ N+V I +A D LFDE+P+RD+ S N+ ++ ++G ++ + LF
Sbjct: 18 VKSTNLVLRCVFIRNFATHAD-----HLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALF 72
Query: 216 REMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSL 275
++ + + P L AC S + G+ +H + K + +L
Sbjct: 73 LQIHRASPDLSSHTFTP-------VLGACSLLSYPETGRQVHALMIKQGAETGTISKTAL 125
Query: 276 VDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRP 335
+DMY K G+L + +VFE +K L SWN++++ F +G+ + A+ VF M V
Sbjct: 126 IDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYR--ERVEI 183
Query: 336 DGVTFVGLLNACTHGGLVEQGCSYFEMMT---REYGIEPQIEHYGCLVDLLGRAGRFDEA 392
T ++ C +++QG M+ R+ + ++ G +EA
Sbjct: 184 SEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDLVVLGT-----AMISFYSSVGLINEA 238
Query: 393 MEVVRGMSMEPDEVVWGSLFNGC 415
M+V +++ DEV+ SL +GC
Sbjct: 239 MKVYNSLNVHTDEVMLNSLISGC 261
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 178/327 (54%), Gaps = 9/327 (2%)
Query: 167 MISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERG 226
+I Y++ GD++ A F+ MPE+ +WN +IAG +G+ E + L +M + G
Sbjct: 265 LIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDM----RDSG 320
Query: 227 YRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLA 286
++ TL + + L+L K H + +N F + + +LVD Y K G +
Sbjct: 321 VSIDQ---FTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVD 377
Query: 287 LARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNA 346
AR VF+ P K + SWN+++ +A HG+ A+ +FE+M+ +V P+ VTF+ +L+A
Sbjct: 378 TARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMI--AANVAPNHVTFLAVLSA 435
Query: 347 CTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEV 406
C + GL EQG F M+ +GI+P+ HY C+++LLGR G DEA+ +R ++
Sbjct: 436 CAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVN 495
Query: 407 VWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILK 466
+W +L N C++ +L A+KL + P G +++ N+Y +GK E V L+
Sbjct: 496 MWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLE 555
Query: 467 QQKSYKVPGCSWIEIDDQVHQFFSLDQ 493
+ +P C+W+E+ DQ H F S D+
Sbjct: 556 SKGLSMMPACTWVEVGDQTHSFLSGDR 582
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 121/262 (46%), Gaps = 12/262 (4%)
Query: 171 YARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCN 230
+ + G + A +LFDE+PER++ S+ ++I+G G + E LF+ M E C
Sbjct: 168 HVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMM----WEELSDCE 223
Query: 231 KPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARK 290
T L A + +GK +H K ++F+S L+DMY KCG++ AR
Sbjct: 224 TH---TFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARC 280
Query: 291 VFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHG 350
FE P+K +WN++I +ALHG SE A+ + M + G V D T ++ T
Sbjct: 281 AFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSG--VSIDQFTLSIMIRISTKL 338
Query: 351 GLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGS 410
+E + R G E +I LVD + GR D A V + + + W +
Sbjct: 339 AKLELTKQAHASLIRN-GFESEIVANTALVDFYSKWGRVDTARYVFDKLP-RKNIISWNA 396
Query: 411 LFNGCKVYGR-TDLAEFAAKKL 431
L G +GR TD + K +
Sbjct: 397 LMGGYANHGRGTDAVKLFEKMI 418
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 107/231 (46%), Gaps = 19/231 (8%)
Query: 113 TGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYA 172
T HA +++ GFE + TALVD YS+ G + A VFD++ +N++S+ A++ GYA
Sbjct: 344 TKQAHASLIRNGFESEIVANTALVDFYSK-WGRVDTARYVFDKLPRKNIISWNALMGGYA 402
Query: 173 RVGDVDSALKLFDEMPERDVP----SWNALIAGCTQNGFFSEGIRLFREMVALAAERGYR 228
G A+KLF++M +V ++ A+++ C +G +G +F M +
Sbjct: 403 NHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHG----- 457
Query: 229 CNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALA 288
KP + C + G +L ++ + + +L++ NL L
Sbjct: 458 -IKPRAMHYACMIELLGRDGLLDEAI---AFIRRAPLKTTVNMWAALLNACRMQENLELG 513
Query: 289 R----KVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRP 335
R K++ M P+K L ++ M N + G++ A V E + G + P
Sbjct: 514 RVVAEKLYGMGPEK-LGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMP 563
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 94/211 (44%), Gaps = 5/211 (2%)
Query: 215 FREMVALAAERGYRCNKPNPVTLVCAL-SACGHTSMLQLGKWIHGYVYKNDFFVDSFISN 273
FRE L RC+ V+ AL AC ++ K ++G++ N F + ++ N
Sbjct: 103 FREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMN 162
Query: 274 SLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDV 333
++ M+ KCG + AR++F+ P++ L S+ S+I+ F G A +F+ M E D
Sbjct: 163 RILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDC 222
Query: 334 RPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAM 393
TF +L A G + G + + G+ L+D+ + G ++A
Sbjct: 223 ETH--TFAVMLRASAGLGSIYVG-KQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDAR 279
Query: 394 EVVRGMSMEPDEVVWGSLFNGCKVYGRTDLA 424
M E V W ++ G ++G ++ A
Sbjct: 280 CAFECMP-EKTTVAWNNVIAGYALHGYSEEA 309
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 202 bits (514), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 143/476 (30%), Positives = 228/476 (47%), Gaps = 73/476 (15%)
Query: 24 QLQAHLTTLGHAHTDFYAFKLVRF---CALTLSNLPYARRIFDHLHSPNIYLYTS----- 75
QL + G + F + LV F C L + ARR+F+ + ++ L+ +
Sbjct: 163 QLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVE----ARRVFEAVLDRDLVLWNALVSSY 218
Query: 76 -------STFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTGAVHAQIVKTGFEQY 128
F L + M S+ R + F + +L +C + +HA + K ++
Sbjct: 219 VLNGMIDEAFGLLKLM--GSDKNRFRGDYFTFSSLLSACRIEQGK-QIHAILFKVSYQ-- 273
Query: 129 PIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMP 188
FD + TA+++ YA+ + A + F+ M
Sbjct: 274 ------------------------FD------IPVATALLNMYAKSNHLSDARECFESMV 303
Query: 189 ERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTS 248
R+V SWNA+I G QNG E +RLF +M+ + P+ +T LS+C S
Sbjct: 304 VRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQ-------PDELTFASVLSSCAKFS 356
Query: 249 MLQLGKWIHGYVYKN---DFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNS 305
+ K + V K DF ++NSL+ Y + GNL+ A F + L SW S
Sbjct: 357 AIWEIKQVQAMVTKKGSADFLS---VANSLISSYSRNGNLSEALLCFHSIREPDLVSWTS 413
Query: 306 MINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTR 365
+I A HG +E ++ +FE M++ ++PD +TF+ +L+AC+HGGLV++G F+ MT
Sbjct: 414 VIGALASHGFAEESLQMFESMLQ---KLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTE 470
Query: 366 EYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAE 425
Y IE + EHY CL+DLLGRAG DEA +V+ M EP + GC ++ + + +
Sbjct: 471 FYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMK 530
Query: 426 FAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSY--KVPGCSWI 479
+ AKKLLEI+P +L+N Y G W++ + R +++ Y K PGCSW+
Sbjct: 531 WGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAA-LLRKRERRNCYNPKTPGCSWL 585
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 140/316 (44%), Gaps = 31/316 (9%)
Query: 167 MISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQN----------GFFSEGIRLFR 216
++ Y ++ + D A KLFDEMP R++ +WN LI G Q GF LF
Sbjct: 77 LLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRILFT 136
Query: 217 EMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLV 276
+ V+L + V+ + + C ++ ++ G +H + K F S SLV
Sbjct: 137 D-VSL-----------DHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLV 184
Query: 277 DMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPD 336
YGKCG + AR+VFE D+ L WN++++ + L+G + A + + M R D
Sbjct: 185 HFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGD 244
Query: 337 GVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVV 396
TF LL+AC +EQG ++ + + I L+++ ++ +A E
Sbjct: 245 YFTFSSLLSACR----IEQGKQIHAILFK-VSYQFDIPVATALLNMYAKSNHLSDARECF 299
Query: 397 RGMSMEPDEVVWGSLFNGCKV--YGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGK 454
M + + V W ++ G GR + F L + P + +L++
Sbjct: 300 ESMVVR-NVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAI 358
Query: 455 WDEVRNVWRILKQQKS 470
W E++ V ++ ++ S
Sbjct: 359 W-EIKQVQAMVTKKGS 373
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 83/189 (43%), Gaps = 16/189 (8%)
Query: 257 HGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHG-- 314
HG++ K + F+ N L+ Y K A K+F+ P + + +WN +I HG
Sbjct: 59 HGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILI-----HGVI 113
Query: 315 QSEGAIAVFEQMVEC------GGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYG 368
Q +G + C DV D V+F+GL+ CT ++ G +M ++ G
Sbjct: 114 QRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQ-G 172
Query: 369 IEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAA 428
+E LV G+ G EA V + ++ D V+W +L + + G D A F
Sbjct: 173 LESSCFPSTSLVHFYGKCGLIVEARRVFEAV-LDRDLVLWNALVSSYVLNGMIDEA-FGL 230
Query: 429 KKLLEIDPH 437
KL+ D +
Sbjct: 231 LKLMGSDKN 239
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 157/546 (28%), Positives = 243/546 (44%), Gaps = 109/546 (19%)
Query: 23 KQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSPNIYLYTS------- 75
++L + +T A ++A +L RF AL +L AR++FD +++L+ S
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALN-DDLISARKLFDVFPERSVFLWNSIIRAYAK 83
Query: 76 -----STFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTG---AVHAQIVKTG--- 124
+ SLF ++L + TRP+NF Y + + ES T +H + +G
Sbjct: 84 AHQFTTVLSLFSQIL----RSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGF 139
Query: 125 ------------------------FEQYPIVQTALVDSYSRGLGGLGNAEK---VFDEMR 157
F P AL + G G G +K +F+ M+
Sbjct: 140 DQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQ 199
Query: 158 ER----NVVSFTAMISG-----------------------------------YARVGDVD 178
R N + A+ SG Y+R +
Sbjct: 200 HRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIA 259
Query: 179 SALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLV 238
SA +F+ + E D+ + ++LI G ++ G E + LF AE KP+ V +
Sbjct: 260 SACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLF-------AELRMSGKKPDCVLVA 312
Query: 239 CALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDK 298
L +C S GK +H YV + +D + ++L+DMY KCG L A +F P+K
Sbjct: 313 IVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEK 372
Query: 299 GLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCS 358
+ S+NS+I LHG + A F +++E G + PD +TF LL C H GL+ +G
Sbjct: 373 NIVSFNSLILGLGLHGFASTAFEKFTEILEMG--LIPDEITFSALLCTCCHSGLLNKGQE 430
Query: 359 YFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVY 418
FE M E+GIEPQ EHY +V L+G AG+ +EA E V + D + G+L + C+V+
Sbjct: 431 IFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVH 490
Query: 419 GRTDLAEFAAKKLLEIDPHNGG------YGIMLANVYGELGKWDEVRNVWRILKQQKSYK 472
T LAE A+ + H G Y +ML+NVY G+WDEV + + + K
Sbjct: 491 ENTHLAEVVAENI-----HKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGK 545
Query: 473 VPGCSW 478
+PG SW
Sbjct: 546 LPGISW 551
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 136/454 (29%), Positives = 222/454 (48%), Gaps = 61/454 (13%)
Query: 106 SCHESRSTGA-VHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRER----- 159
SC + + G+ VH+ VK GF +V +LVD YS+ G L +A KVFD ++ +
Sbjct: 363 SCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSK-CGKLEDARKVFDSVKNKDVYTW 421
Query: 160 ------------------------------NVVSFTAMISGYARVGDVDSALKLFDEMP- 188
N++++ MISGY + GD A+ LF M
Sbjct: 422 NSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEK 481
Query: 189 ----ERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSAC 244
+R+ +WN +IAG QNG E + LFR+M + PN VT++ L AC
Sbjct: 482 DGKVQRNTATWNLIIAGYIQNGKKDEALELFRKM-------QFSRFMPNSVTILSLLPAC 534
Query: 245 GHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWN 304
+ ++ + IHG V + + + N+L D Y K G++ +R +F K + +WN
Sbjct: 535 ANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWN 594
Query: 305 SMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMT 364
S+I + LHG A+A+F QM G + P+ T ++ A G V++G F +
Sbjct: 595 SLIGGYVLHGSYGPALALFNQMKTQG--ITPNRGTLSSIILAHGLMGNVDEGKKVFYSIA 652
Query: 365 REYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLA 424
+Y I P +EH +V L GRA R +EA++ ++ M+++ + +W S GC+++G D+A
Sbjct: 653 NDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMA 712
Query: 425 EFAAKKLLEIDPHNGGYGIMLANVY---GELGKWDEVRNVWR--ILKQQKSYKVPGCSWI 479
AA+ L ++P N +++ +Y +LG+ E R +LK K G SWI
Sbjct: 713 IHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLK-----KPLGQSWI 767
Query: 480 EIDDQVHQFFSLDQSSPKAEELYSVLESLIGFGN 513
E+ + +H F + DQS + LY ++E + N
Sbjct: 768 EVRNLIHTFTTGDQSKLCTDVLYPLVEKMSRLDN 801
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 105/415 (25%), Positives = 188/415 (45%), Gaps = 71/415 (17%)
Query: 58 ARRIFDHLHSPNIYLYTS------------STFSLFRRMLCNSNPTTTRPNNFIYPHVLK 105
AR++FD + N++ +++ LFR M+ + P++F++P +L+
Sbjct: 134 ARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDG----VLPDDFLFPKILQ 189
Query: 106 ---SCHESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVV 162
+C + + +H+ ++K G V +++ Y++ G L A K F MRER+V+
Sbjct: 190 GCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAK-CGELDFATKFFRRMRERDVI 248
Query: 163 SFTA-----------------------------------MISGYARVGDVDSALKLFDEM 187
++ + +I GY ++G D+A+ L +M
Sbjct: 249 AWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKM 308
Query: 188 PE----RDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSA 243
DV +W A+I+G NG + + +FR+M PN VT++ A+SA
Sbjct: 309 ETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGV-------VPNAVTIMSAVSA 361
Query: 244 CGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSW 303
C ++ G +H K F D + NSLVDMY KCG L ARKVF+ +K + +W
Sbjct: 362 CSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTW 421
Query: 304 NSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMM 363
NSMI + G A +F +M + ++RP+ +T+ +++ G + F+ M
Sbjct: 422 NSMITGYCQAGYCGKAYELFTRMQD--ANLRPNIITWNTMISGYIKNGDEGEAMDLFQRM 479
Query: 364 TREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSME---PDEVVWGSLFNGC 415
++ ++ + ++ + G+ DEA+E+ R M P+ V SL C
Sbjct: 480 EKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPAC 534
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 167/367 (45%), Gaps = 20/367 (5%)
Query: 111 RSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISG 170
++ ++ Q K Y + + +DS S LG + +A F E +V T ++S
Sbjct: 67 KALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHAR--FGLFTEPDVFVETKLLSM 124
Query: 171 YARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCN 230
YA+ G + A K+FD M ER++ +W+A+I ++ + E +LFR M+
Sbjct: 125 YAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGV------- 177
Query: 231 KPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARK 290
P+ L C + ++ GK IH V K +SNS++ +Y KCG L A K
Sbjct: 178 LPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATK 237
Query: 291 VFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHG 350
F ++ + +WNS++ + +G+ E A+ + ++M + G + P VT+ L+
Sbjct: 238 FFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEG--ISPGLVTWNILIGGYNQL 295
Query: 351 GLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSME---PDEVV 407
G + + M +GI + + ++ L G +A+++ R M + P+ V
Sbjct: 296 GKCDAAMDLMQKM-ETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVT 354
Query: 408 WGSLFNGC---KVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRI 464
S + C KV + A K+ ID + G L ++Y + GK ++ R V+
Sbjct: 355 IMSAVSACSCLKVINQGSEVHSIAVKMGFID--DVLVGNSLVDMYSKCGKLEDARKVFDS 412
Query: 465 LKQQKSY 471
+K + Y
Sbjct: 413 VKNKDVY 419
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 113/377 (29%), Positives = 193/377 (51%), Gaps = 51/377 (13%)
Query: 93 TRPNNFIYPHVLKSCHESRSTG---AVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNA 149
+P+ F +P VLK+C S A+H +VK GF
Sbjct: 191 VKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGY---------------------- 228
Query: 150 EKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFS 209
+V A++ YA+ GD+ A +FD +P +D SWN+++ G +G
Sbjct: 229 ----------DVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLH 278
Query: 210 EGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDS 269
E + +FR MV E P+ V + L+ + G+ +HG+V + +
Sbjct: 279 EALDIFRLMVQNGIE-------PDKVAISSVLA---RVLSFKHGRQLHGWVIRRGMEWEL 328
Query: 270 FISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVEC 329
++N+L+ +Y K G L A +F+ ++ SWN++I+ H ++ + FEQM
Sbjct: 329 SVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISA---HSKNSNGLKYFEQMHR- 384
Query: 330 GGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRF 389
+ +PDG+TFV +L+ C + G+VE G F +M++EYGI+P++EHY C+V+L GRAG
Sbjct: 385 -ANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMM 443
Query: 390 DEAME-VVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANV 448
+EA +V+ M +E VWG+L C ++G TD+ E AA++L E++P N +L +
Sbjct: 444 EEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRI 503
Query: 449 YGELGKWDEVRNVWRIL 465
Y + + ++V V +++
Sbjct: 504 YSKAKRAEDVERVRQMM 520
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 126/252 (50%), Gaps = 16/252 (6%)
Query: 165 TAMISGYARVGDVDSALKLFDEMPERDVP--SWNALIAGCTQNGFFSEGIRLFREMVALA 222
+ ++ YA G + A ++FD M +RD +WN+LI+G + G + + + L+ +M
Sbjct: 131 SKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQM---- 186
Query: 223 AERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKC 282
AE G KP+ T L ACG +Q+G+ IH + K F D ++ N+LV MY KC
Sbjct: 187 AEDGV---KPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKC 243
Query: 283 GNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVG 342
G++ AR VF+M P K SWNSM+ + HG A+ +F MV+ G + PD V
Sbjct: 244 GDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNG--IEPDKVAISS 301
Query: 343 LLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSME 402
+L + G + R G+E ++ L+ L + G+ +A + M +E
Sbjct: 302 VLARVLS---FKHGRQLHGWVIRR-GMEWELSVANALIVLYSKRGQLGQACFIFDQM-LE 356
Query: 403 PDEVVWGSLFNG 414
D V W ++ +
Sbjct: 357 RDTVSWNAIISA 368
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 90/199 (45%), Gaps = 16/199 (8%)
Query: 222 AAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIH----GYVYKNDFFVDSFISNSLVD 277
+A++G +P L C + G +H Y+ +N+ IS+ LV
Sbjct: 82 SAQKGISLTEPE--IFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLG----ISSKLVR 135
Query: 278 MYGKCGNLALARKVFEM--NPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRP 335
+Y CG +A +VF+ D +WNS+I+ +A GQ E A+A++ QM E G V+P
Sbjct: 136 LYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDG--VKP 193
Query: 336 DGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEV 395
D TF +L AC G V+ G + + +E G + LV + + G +A V
Sbjct: 194 DRFTFPRVLKACGGIGSVQIGEAIHRDLVKE-GFGYDVYVLNALVVMYAKCGDIVKARNV 252
Query: 396 VRGMSMEPDEVVWGSLFNG 414
M D V W S+ G
Sbjct: 253 F-DMIPHKDYVSWNSMLTG 270
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 138/478 (28%), Positives = 221/478 (46%), Gaps = 99/478 (20%)
Query: 77 TFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCH---ESRSTGAVHAQIVKT---------- 123
SLFR M+ +PN VL+ C SR ++H +K
Sbjct: 385 AISLFRDMM----RIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETAT 440
Query: 124 -----------------GFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMR--------- 157
FE+ PI ++ ++G +G+A K FD +
Sbjct: 441 AVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCP 500
Query: 158 -ERNVVSFT--------------------------------AMISGYARVGDVDSALKLF 184
R +V A+I+ + + + +A+ LF
Sbjct: 501 DSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLF 560
Query: 185 DEMP-ERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSA 243
D+ E+ SWN ++ G +G E + FR+M E+ +PN VT V + A
Sbjct: 561 DKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQM---KVEKF----QPNAVTFVNIVRA 613
Query: 244 CGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSW 303
S L++G +H + + F + + NSLVDMY KCG + + K F +K + SW
Sbjct: 614 AAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSW 673
Query: 304 NSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMM 363
N+M++ +A HG + A+++F M E +++PD V+F+ +L+AC H GLVE+G FE M
Sbjct: 674 NTMLSAYAAHGLASCAVSLFLSMQE--NELKPDSVSFLSVLSACRHAGLVEEGKRIFEEM 731
Query: 364 TREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDL 423
+ IE ++EHY C+VDLLG+AG F EA+E++R M ++ VWG+L N +++ L
Sbjct: 732 GERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWL 791
Query: 424 AEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVPGCSWIEI 481
+ A +L++++P N + Y + + EV NV RI KVP CSWIE+
Sbjct: 792 SNAALCQLVKLEPLNPSH-------YSQDRRLGEVNNVSRI------KKVPACSWIEV 836
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 135/276 (48%), Gaps = 14/276 (5%)
Query: 165 TAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAE 224
T+++S Y++ G+++ A +LF + +RDV SW+A+IA Q G E I LFR+M+ +
Sbjct: 339 TSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHI- 397
Query: 225 RGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGN 284
KPN VTL L C + +LGK IH Y K D + + +++ MY KCG
Sbjct: 398 ------KPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGR 451
Query: 285 LALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLL 344
+ A K FE P K ++N++ + G + A V++ M G V PD T VG+L
Sbjct: 452 FSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHG--VCPDSRTMVGML 509
Query: 345 NACTHGGLVEQG-CSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEP 403
C +G C Y +++ + E + H L+++ + A+ + E
Sbjct: 510 QTCAFCSDYARGSCVYGQIIKHGFDSECHVAH--ALINMFTKCDALAAAIVLFDKCGFEK 567
Query: 404 DEVVWGSLFNGCKVYGRTD--LAEFAAKKLLEIDPH 437
V W + NG ++G+ + +A F K+ + P+
Sbjct: 568 STVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPN 603
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 158/362 (43%), Gaps = 36/362 (9%)
Query: 54 NLPYARRIFDHLHSPNIYLYTSSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRST 113
+L AR++FD +H ++ + + L + C+S + H ++SC
Sbjct: 150 DLVSARQVFDKMHVKDVVTWNTMVSGLAQNG-CSSAA-------LLLFHDMRSC----CV 197
Query: 114 GAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTA-MISGYA 172
H + + P V R L GL +++ + +F++ +I Y
Sbjct: 198 DIDHVSL----YNLIPAVSKLEKSDVCRCLHGL--------VIKKGFIFAFSSGLIDMYC 245
Query: 173 RVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKP 232
D+ +A +F+E+ +D SW ++A NGFF E + LF M R Y +
Sbjct: 246 NCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLM------RNYDV-RM 298
Query: 233 NPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVF 292
N V AL A + L G IH Y + D ++ SL+ MY KCG L +A ++F
Sbjct: 299 NKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLF 358
Query: 293 EMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGL 352
D+ + SW++MI + GQ + AI++F M+ ++P+ VT +L C
Sbjct: 359 INIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRI--HIKPNAVTLTSVLQGCAGVAA 416
Query: 353 VEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLF 412
G S + IE ++E ++ + + GRF A++ + ++ D V + +L
Sbjct: 417 SRLGKS-IHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIK-DAVAFNALA 474
Query: 413 NG 414
G
Sbjct: 475 QG 476
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 164/403 (40%), Gaps = 88/403 (21%)
Query: 58 ARRIFDHLHSPNIYLYTS-----STFSLFRRML----CNSNPTTTRPNNFIYPHVLKSCH 108
+R IFD + P + L+ S + L R L S P+ + + LK+C
Sbjct: 52 SRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACA 111
Query: 109 ES---RSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFT 165
S + +H I + G E + TALV+ Y +
Sbjct: 112 GSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCK------------------------ 147
Query: 166 AMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAER 225
AR D+ SA ++FD+M +DV +WN +++G QNG S + LF +M +
Sbjct: 148 ------AR--DLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSC---- 195
Query: 226 GYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNL 285
C + V+L + A + + +HG V K F S+ L+DMY C +L
Sbjct: 196 ---CVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFA--FSSGLIDMYCNCADL 250
Query: 286 ALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGV------- 338
A VFE K +SW +M+ +A +G E + +F+ M DVR + V
Sbjct: 251 YAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMR--NYDVRMNKVAAASALQ 308
Query: 339 --TFVGLL--NACTHGGLVEQG-----------------CSYFEMMTREY-GIEPQ-IEH 375
+VG L H V+QG C E+ + + IE + +
Sbjct: 309 AAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVS 368
Query: 376 YGCLVDLLGRAGRFDEAMEVVRGM---SMEPDEVVWGSLFNGC 415
+ ++ +AG+ DEA+ + R M ++P+ V S+ GC
Sbjct: 369 WSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGC 411
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 114/257 (44%), Gaps = 34/257 (13%)
Query: 167 MISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERG 226
+I+ Y+ D + +FD + + V WN++I G T+ G E + F M + E+G
Sbjct: 39 LINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYM---SEEKG 95
Query: 227 YRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLA 286
P+ + AL AC + + G IH + + D +I +LV+MY K +L
Sbjct: 96 I---DPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLV 152
Query: 287 LARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNA 346
AR+VF+ K + +WN+M++ A +G S A+ +F M C D+ D V+ L+ A
Sbjct: 153 SARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDI--DHVSLYNLIPA 210
Query: 347 -----------CTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEV 395
C HG ++++G + G+ I+ Y DL F+E
Sbjct: 211 VSKLEKSDVCRCLHGLVIKKG----FIFAFSSGL---IDMYCNCADLYAAESVFEEV--- 260
Query: 396 VRGMSMEPDEVVWGSLF 412
DE WG++
Sbjct: 261 -----WRKDESSWGTMM 272
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 3/142 (2%)
Query: 273 NSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGD 332
N L++ Y L+R +F+ D G+ WNSMI + G A+ F M E G
Sbjct: 37 NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKG- 95
Query: 333 VRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEA 392
+ PD +F L AC ++G +++ E G+E + LV++ +A A
Sbjct: 96 IDPDKYSFTFALKACAGSMDFKKGLRIHDLIA-EMGLESDVYIGTALVEMYCKARDLVSA 154
Query: 393 MEVVRGMSMEPDEVVWGSLFNG 414
+V M ++ D V W ++ +G
Sbjct: 155 RQVFDKMHVK-DVVTWNTMVSG 175
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 194/358 (54%), Gaps = 23/358 (6%)
Query: 158 ERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFRE 217
E N V+ +++I Y VD A + D M +DV S + +I+G G E I +F
Sbjct: 360 ESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCH 419
Query: 218 MVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFV-DSFISNSLV 276
M + PN +T++ L+AC ++ L+ KW HG + + D + S+V
Sbjct: 420 MR----------DTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIV 469
Query: 277 DMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPD 336
D Y KCG + +AR+ F+ +K + SW +I+ +A++G + A+A+F++M + G P+
Sbjct: 470 DAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKG--YTPN 527
Query: 337 GVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVV 396
VT++ L+AC HGGLV++G F+ M E +P ++HY C+VD+L RAG D A+E++
Sbjct: 528 AVTYLAALSACNHGGLVKKGLMIFKSMVEE-DHKPSLQHYSCIVDMLSRAGEIDTAVELI 586
Query: 397 RGMSMEPDEV-----VWGSLFNGCK-VYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYG 450
+ + P++V WG++ +GC+ + + + ++LE++P ++ ++ +
Sbjct: 587 KNL---PEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFA 643
Query: 451 ELGKWDEVRNVWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESL 508
W++V + R++K++K V G S + + +F + D+ S EL V++SL
Sbjct: 644 AEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGDKLSQSDSELNDVVQSL 701
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 152/329 (46%), Gaps = 45/329 (13%)
Query: 175 GDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNP 234
D SA KLFDEM ERDV SW+ +I Q+ G++LF+EMV A +P+
Sbjct: 173 SDSLSARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAK------TEPDC 226
Query: 235 VTLVCALSACGHTSMLQLGKWIHGYVYKNDF-FVDSFISNSLVDMYGKCGNLALARKVFE 293
VT+ L AC + +G+ +HG+ + F D F+ NSL+DMY K ++ A +VF+
Sbjct: 227 VTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFD 286
Query: 294 MNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNAC------ 347
+ + SWNS++ F + + + A+ +F MV+ +V D VT V LL C
Sbjct: 287 ETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEV--DEVTVVSLLRVCKFFEQP 344
Query: 348 -----THGGLVEQGCSYFEM----MTREYGIEPQIEHYGCLVDL---------------L 383
HG ++ +G E+ + Y ++ G ++D L
Sbjct: 345 LPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGL 404
Query: 384 GRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEF----AAKKLLEIDPHNG 439
AGR DEA+ + M P+ + SL N C V +++ A ++ L I+ +
Sbjct: 405 AHAGRSDEAISIFCHMRDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISV 464
Query: 440 GYGIMLANVYGELGKWDEVRNVWRILKQQ 468
G I+ + Y + G + R + + ++
Sbjct: 465 GTSIV--DAYAKCGAIEMARRTFDQITEK 491
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 137/318 (43%), Gaps = 63/318 (19%)
Query: 47 FCALTLSNLPYARRIFDHLHSPNIYLYTSSTFS------------LFRRMLCNSNPTTTR 94
C S+ AR++FD + ++ ++ S LF+ M+ + T
Sbjct: 167 LCMYADSDSLSARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMV---HEAKTE 223
Query: 95 PNNFIYPHVLKSC--HESRSTG-AVHAQIVKTGFEQYPI-VQTALVDSYSRGLGGLGNAE 150
P+ VLK+C E G +VH ++ GF+ + V +L+D YS+G
Sbjct: 224 PDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGF------- 276
Query: 151 KVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSE 210
DVDSA ++FDE R++ SWN+++AG N + E
Sbjct: 277 -------------------------DVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDE 311
Query: 211 GIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSF 270
+ +F MV A E + VT+V L C K IHG + + + +
Sbjct: 312 ALEMFHLMVQEAVE-------VDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEV 364
Query: 271 ISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECG 330
+SL+D Y C + A V + K + S ++MI+ A G+S+ AI++F M +
Sbjct: 365 ALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRD-- 422
Query: 331 GDVRPDGVTFVGLLNACT 348
P+ +T + LLNAC+
Sbjct: 423 ---TPNAITVISLLNACS 437
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 129/282 (45%), Gaps = 45/282 (15%)
Query: 171 YARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCN 230
Y + GD+ S L+ FD M RD SWN ++ G GF EG+ F ++ E
Sbjct: 71 YMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFE------ 124
Query: 231 KPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARK 290
PN TLV + AC S+ G+ IHGYV ++ F S + NS++ MY +L+ ARK
Sbjct: 125 -PNTSTLVLVIHAC--RSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARK 180
Query: 291 VFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACT-- 348
+F+ ++ + SW+ +I + + + +F++MV PD VT +L ACT
Sbjct: 181 LFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVH-EAKTEPDCVTVTSVLKACTVM 239
Query: 349 ---------HGGLVEQG--------C-SYFEMMTREYGIEP-----------QIEHYGCL 379
HG + +G C S +M ++ + ++ I + +
Sbjct: 240 EDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSI 299
Query: 380 VDLLGRAGRFDEAMEVVRGM---SMEPDEVVWGSLFNGCKVY 418
+ R+DEA+E+ M ++E DEV SL CK +
Sbjct: 300 LAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFF 341
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 91/190 (47%), Gaps = 29/190 (15%)
Query: 38 DFYAFKLVRFCALTLSNLPYARRIFDHLHSPNIYLYTSSTFSLFRRMLCNSNPTTTRPNN 97
D +K V C+ +S L +A R + S+F C+ T PN
Sbjct: 387 DSMTYKDVVSCSTMISGLAHAGR-------------SDEAISIF----CHMRDT---PNA 426
Query: 98 FIYPHVLKSCHES---RSTGAVHAQIVKTGFEQYPI-VQTALVDSYSRGLGGLGNAEKVF 153
+L +C S R++ H ++ I V T++VD+Y++ G + A + F
Sbjct: 427 ITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAK-CGAIEMARRTF 485
Query: 154 DEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPER----DVPSWNALIAGCTQNGFFS 209
D++ E+N++S+T +IS YA G D AL LFDEM ++ + ++ A ++ C G
Sbjct: 486 DQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVK 545
Query: 210 EGIRLFREMV 219
+G+ +F+ MV
Sbjct: 546 KGLMIFKSMV 555
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 137/491 (27%), Positives = 221/491 (45%), Gaps = 85/491 (17%)
Query: 1 MKPNLNEQVLTILGKSNHLNHLKQLQAHLTTLGH-AHTDFYAFKLVRFCALTLSNLPYAR 59
M L + I ++ L Q+ A L ++A +++ C + Y R
Sbjct: 1 MSRELTVSLAAIASQALTFPQLNQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTR 60
Query: 60 RIFDHLHSPNIYLYTSSTFSLFRRM-LCNS--------NPTTTRPNNFIYPHVLKSCHES 110
IFD + PN+++ +S F F +M + N + P+ F +P V+KS
Sbjct: 61 LIFDSVTFPNVFV-VNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSA--G 117
Query: 111 RSTGAVHAQIVKTGFEQYPIVQTALVDSYSR---------------------------GL 143
R A + K GF + P V+ ++D Y + G
Sbjct: 118 RFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGY 177
Query: 144 GGLGNAE---KVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIA 200
GN E K+FD M E +VVS+T MI+G+A+V D+++A K FD MPE+ V SWNA+++
Sbjct: 178 WKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLS 237
Query: 201 GCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYV 260
G QNGF + +RLF +M+ L +PN T V +SAC + L + + +
Sbjct: 238 GYAQNGFTEDALRLFNDMLRLGV-------RPNETTWVIVISACSFRADPSLTRSLVKLI 290
Query: 261 YKNDFFVDSFISNSLVDMYGKC--------------------------------GNLALA 288
+ ++ F+ +L+DM+ KC G+++ A
Sbjct: 291 DEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSA 350
Query: 289 RKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACT 348
R++F+ P + + SWNS+I +A +GQ+ AI FE M++ GD +PD VT + +L+AC
Sbjct: 351 RQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDY-GDSKPDEVTMISVLSACG 409
Query: 349 HGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVW 408
H +E G + + R+ I+ Y L+ + R G EA V M E D V +
Sbjct: 410 HMADLELGDCIVDYI-RKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMK-ERDVVSY 467
Query: 409 GSLFNGCKVYG 419
+LF G
Sbjct: 468 NTLFTAFAANG 478
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/349 (32%), Positives = 187/349 (53%), Gaps = 37/349 (10%)
Query: 52 LSNLPYARRIFDHLHSPNIYL------------YTSSTFSLFRRMLCNSNPTTTRPNNFI 99
+ +L AR+ FD + ++ +T LF ML RPN
Sbjct: 211 VKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDML----RLGVRPNETT 266
Query: 100 YPHVLKSCHESRSTGAVHAQIVKTGFEQYP----IVQTALVDSYSRGLGGLGNAEKVFDE 155
+ V+ +C R+ ++ +VK E+ V+TAL+D +++ + +A ++F+E
Sbjct: 267 WVIVISAC-SFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAK-CRDIQSARRIFNE 324
Query: 156 M-RERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRL 214
+ +RN+V++ AMISGY R+GD+ SA +LFD MP+R+V SWN+LIAG NG + I
Sbjct: 325 LGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEF 384
Query: 215 FREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNS 274
F +M+ Y +KP+ VT++ LSACGH + L+LG I Y+ KN ++ S
Sbjct: 385 FEDMI------DYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRS 438
Query: 275 LVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVR 334
L+ MY + GNL A++VF+ ++ + S+N++ FA +G + + +M + G +
Sbjct: 439 LIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEG--IE 496
Query: 335 PDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLL 383
PD VT+ +L AC GL+++G F+ + P +HY C+ DLL
Sbjct: 497 PDRVTYTSVLTACNRAGLLKEGQRIFKSIR-----NPLADHYACM-DLL 539
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 104/255 (40%), Gaps = 28/255 (10%)
Query: 183 LFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCN-KPNPVTLVCAL 241
+FD + +V N++ ++ ++ +RL+ E+ RC P+ + +
Sbjct: 62 IFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLY--------EQRSRCGIMPDAFSFPVVI 113
Query: 242 SACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLT 301
+ G + G V K FF D ++ N ++DMY K ++ ARKVF+ + +
Sbjct: 114 KSAG-----RFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGS 168
Query: 302 SWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFE 361
WN MI+ + G E A +F+ M E D V++ ++ +E YF+
Sbjct: 169 DWNVMISGYWKWGNKEEACKLFDMMPE------NDVVSWTVMITGFAKVKDLENARKYFD 222
Query: 362 MMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGM---SMEPDEVVWGSLFNGCKVY 418
M E + + ++ + G ++A+ + M + P+E W + + C
Sbjct: 223 RMP-----EKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFR 277
Query: 419 GRTDLAEFAAKKLLE 433
L K + E
Sbjct: 278 ADPSLTRSLVKLIDE 292
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 103/322 (31%), Positives = 170/322 (52%), Gaps = 11/322 (3%)
Query: 166 AMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAER 225
++I+ Y+R D+ A +F ++ + +WN++I+G N E L +EM+
Sbjct: 362 SLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLL----S 417
Query: 226 GYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFIS-NSLVDMYGKCGN 284
G+ PN +TL L LQ GK H Y+ + + D I NSLVDMY K G
Sbjct: 418 GFH---PNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGE 474
Query: 285 LALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLL 344
+ A++VF+ + ++ S+I+ + G+ E A+A F+ M G ++PD VT V +L
Sbjct: 475 IIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSG--IKPDHVTMVAVL 532
Query: 345 NACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPD 404
+AC+H LV +G F M +GI ++EHY C+VDL RAG D+A ++ + EP
Sbjct: 533 SACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPS 592
Query: 405 EVVWGSLFNGCKVYGRTDLAEFAAKK-LLEIDPHNGGYGIMLANVYGELGKWDEVRNVWR 463
+ +L C ++G T++ E+AA K LLE P + G+ ++LA++Y G W ++ V
Sbjct: 593 SAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKT 652
Query: 464 ILKQQKSYKVPGCSWIEIDDQV 485
+L K + +E D ++
Sbjct: 653 LLSDLGVQKAHEFALMETDSEL 674
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 167/370 (45%), Gaps = 31/370 (8%)
Query: 77 TFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTG---AVHAQIVKTGFEQYPIVQT 133
+ S+++RM+ R + F YP V+K+C VH I + V
Sbjct: 168 SVSVYKRMMSKG----IRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCN 223
Query: 134 ALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEM----PE 189
AL+ Y R G + A ++FD M ER+ VS+ A+I+ Y + A KL D M E
Sbjct: 224 ALISMYKR-FGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVE 282
Query: 190 RDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYR-CN-KPNPVTLVCALSACGHT 247
+ +WN + GC + G + + AL G R CN + V ++ L AC H
Sbjct: 283 ASIVTWNTIAGGCLEAGNY---------IGALNCVVGMRNCNVRIGSVAMINGLKACSHI 333
Query: 248 SMLQLGKWIHGYVYKNDFFVDSF--ISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNS 305
L+ GK H V ++ F + NSL+ MY +C +L A VF+ L++WNS
Sbjct: 334 GALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNS 393
Query: 306 MINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTR 365
+I+ FA + +SE + ++M+ G P+ +T +L G ++ G + + R
Sbjct: 394 IISGFAYNERSEETSFLLKEMLLSG--FHPNHITLASILPLFARVGNLQHGKEFHCYILR 451
Query: 366 EYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAE 425
+ + + LVD+ ++G A V M + D+V + SL +G YGR E
Sbjct: 452 RQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR-KRDKVTYTSLIDG---YGRLGKGE 507
Query: 426 FAAKKLLEID 435
A ++D
Sbjct: 508 VALAWFKDMD 517
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/310 (20%), Positives = 128/310 (41%), Gaps = 44/310 (14%)
Query: 158 ERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFRE 217
E + V +++ Y+ +D A + + WN LI +N F E + +++
Sbjct: 115 EFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKR 174
Query: 218 MVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVD 277
M++ +G R ++ T + AC G+ +HG + + + ++ N+L+
Sbjct: 175 MMS----KGIRADE---FTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALIS 227
Query: 278 MYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQM----------- 326
MY + G + +AR++F+ ++ SWN++INC+ + A + ++M
Sbjct: 228 MYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVT 287
Query: 327 --------VECGG--------------DVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMT 364
+E G +VR V + L AC+H G ++ G + ++
Sbjct: 288 WNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVI 347
Query: 365 REYGIEPQIEHY-GCLVDLLGRAGRFDEAMEVVRGMSMEPDEV-VWGSLFNGCKVYGRTD 422
R I++ L+ + R A V + +E + + W S+ +G R++
Sbjct: 348 RSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQ--QVEANSLSTWNSIISGFAYNERSE 405
Query: 423 LAEFAAKKLL 432
F K++L
Sbjct: 406 ETSFLLKEML 415
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 103/322 (31%), Positives = 170/322 (52%), Gaps = 11/322 (3%)
Query: 166 AMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAER 225
++I+ Y+R D+ A +F ++ + +WN++I+G N E L +EM+
Sbjct: 362 SLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLL----S 417
Query: 226 GYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFIS-NSLVDMYGKCGN 284
G+ PN +TL L LQ GK H Y+ + + D I NSLVDMY K G
Sbjct: 418 GFH---PNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGE 474
Query: 285 LALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLL 344
+ A++VF+ + ++ S+I+ + G+ E A+A F+ M G ++PD VT V +L
Sbjct: 475 IIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSG--IKPDHVTMVAVL 532
Query: 345 NACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPD 404
+AC+H LV +G F M +GI ++EHY C+VDL RAG D+A ++ + EP
Sbjct: 533 SACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPS 592
Query: 405 EVVWGSLFNGCKVYGRTDLAEFAAKK-LLEIDPHNGGYGIMLANVYGELGKWDEVRNVWR 463
+ +L C ++G T++ E+AA K LLE P + G+ ++LA++Y G W ++ V
Sbjct: 593 SAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKT 652
Query: 464 ILKQQKSYKVPGCSWIEIDDQV 485
+L K + +E D ++
Sbjct: 653 LLSDLGVQKAHEFALMETDSEL 674
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 167/370 (45%), Gaps = 31/370 (8%)
Query: 77 TFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTG---AVHAQIVKTGFEQYPIVQT 133
+ S+++RM+ R + F YP V+K+C VH I + V
Sbjct: 168 SVSVYKRMMSKG----IRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCN 223
Query: 134 ALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEM----PE 189
AL+ Y R G + A ++FD M ER+ VS+ A+I+ Y + A KL D M E
Sbjct: 224 ALISMYKR-FGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVE 282
Query: 190 RDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYR-CN-KPNPVTLVCALSACGHT 247
+ +WN + GC + G + + AL G R CN + V ++ L AC H
Sbjct: 283 ASIVTWNTIAGGCLEAGNY---------IGALNCVVGMRNCNVRIGSVAMINGLKACSHI 333
Query: 248 SMLQLGKWIHGYVYKNDFFVDSF--ISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNS 305
L+ GK H V ++ F + NSL+ MY +C +L A VF+ L++WNS
Sbjct: 334 GALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNS 393
Query: 306 MINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTR 365
+I+ FA + +SE + ++M+ G P+ +T +L G ++ G + + R
Sbjct: 394 IISGFAYNERSEETSFLLKEMLLSG--FHPNHITLASILPLFARVGNLQHGKEFHCYILR 451
Query: 366 EYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAE 425
+ + + LVD+ ++G A V M + D+V + SL +G YGR E
Sbjct: 452 RQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR-KRDKVTYTSLIDG---YGRLGKGE 507
Query: 426 FAAKKLLEID 435
A ++D
Sbjct: 508 VALAWFKDMD 517
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/310 (20%), Positives = 128/310 (41%), Gaps = 44/310 (14%)
Query: 158 ERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFRE 217
E + V +++ Y+ +D A + + WN LI +N F E + +++
Sbjct: 115 EFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKR 174
Query: 218 MVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVD 277
M++ +G R ++ T + AC G+ +HG + + + ++ N+L+
Sbjct: 175 MMS----KGIRADE---FTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALIS 227
Query: 278 MYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQM----------- 326
MY + G + +AR++F+ ++ SWN++INC+ + A + ++M
Sbjct: 228 MYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVT 287
Query: 327 --------VECGG--------------DVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMT 364
+E G +VR V + L AC+H G ++ G + ++
Sbjct: 288 WNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVI 347
Query: 365 REYGIEPQIEHY-GCLVDLLGRAGRFDEAMEVVRGMSMEPDEV-VWGSLFNGCKVYGRTD 422
R I++ L+ + R A V + +E + + W S+ +G R++
Sbjct: 348 RSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQ--QVEANSLSTWNSIISGFAYNERSE 405
Query: 423 LAEFAAKKLL 432
F K++L
Sbjct: 406 ETSFLLKEML 415
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 178 bits (452), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 140/520 (26%), Positives = 245/520 (47%), Gaps = 44/520 (8%)
Query: 2 KPNLNEQV--LTILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYAR 59
KP+ + V L + G +++ +QL ++T G + L+RF T +L A
Sbjct: 52 KPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYK-TSDSLEDAH 110
Query: 60 RIFDHLHSPNIYLYTSSTFSL-----FRRMLC---NSNPTTTRPNNFIYPHVLKSC---H 108
++FD + P++ + S F+ +C + + PN F + L +C H
Sbjct: 111 KVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLH 170
Query: 109 ESRSTGAVHAQIVKTGFEQ-YPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAM 167
S +H+++VK G E+ +V L+D Y + G + +A VF M E++ VS+ A+
Sbjct: 171 LSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGK-CGFMDDAVLVFQHMEEKDTVSWNAI 229
Query: 168 ISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAER-- 225
++ +R G ++ L F +MP D ++N LI ++G F+ ++ +M +
Sbjct: 230 VASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWN 289
Query: 226 ----GYRCNKP------------------NPVTLVCALSACGHTSMLQLGKWIHGYVYKN 263
GY ++ + +L L+A +++ G IH +K
Sbjct: 290 TILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKL 349
Query: 264 DFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVF 323
++++L+DMY KCG L A +F P K L WN MI+ +A +G S AI +F
Sbjct: 350 GLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLF 409
Query: 324 EQMVECGGDVRPDGVTFVGLLNACTHGGL-VEQGCSYFEMMTREYGIEPQIEHYGCLVDL 382
Q+ + ++PD TF+ LL C+H + +E YFEMM EY I+P +EH L+
Sbjct: 410 NQLKQ-ERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRA 468
Query: 383 LGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEI-DPHNGGY 441
+G+ G +A +V++ D V W +L C A+ A K++E+ D Y
Sbjct: 469 MGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEY 528
Query: 442 -GIMLANVYGELGKWDEVRNVWRILKQQKSYKVPGCSWIE 480
I+++N+Y +W EV + +I+++ K G SWI+
Sbjct: 529 LYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWID 568
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 110/231 (47%), Gaps = 13/231 (5%)
Query: 194 SWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLG 253
SW+ ++ + G I + R V L + KP+ LV L G+ + L
Sbjct: 23 SWSTIVPALARFG----SIGVLRAAVELINDG----EKPDASPLVHLLRVSGNYGYVSLC 74
Query: 254 KWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALH 313
+ +HGYV K+ F ++ +SNSL+ Y +L A KVF+ PD + SWNS+++ +
Sbjct: 75 RQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQS 134
Query: 314 GQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQI 373
G+ + I +F ++ DV P+ +F L AC L G + + G+E
Sbjct: 135 GRFQEGICLFLELHR--SDVFPNEFSFTAALAACARLHLSPLGACIHSKLVK-LGLEKGN 191
Query: 374 EHYG-CLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDL 423
G CL+D+ G+ G D+A+ V + M E D V W ++ C G+ +L
Sbjct: 192 VVVGNCLIDMYGKCGFMDDAVLVFQHME-EKDTVSWNAIVASCSRNGKLEL 241
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 201/414 (48%), Gaps = 57/414 (13%)
Query: 76 STFSLFRRMLCNSNPTTTRPNNFIYPHVLKS-----CHESRSTGAVHAQIVKTGFEQYPI 130
++FSLF+ ML +P+ F + +L++ C E S +H +K GF +
Sbjct: 197 TSFSLFQLMLTEGK----KPDCFTFGSLLRASIVVKCLEIVSE--LHGLAIKLGFGR--- 247
Query: 131 VQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPER 190
+AL+ S +++ Y + G + +A KL + +R
Sbjct: 248 -SSALIRS----------------------------LVNAYVKCGSLANAWKLHEGTKKR 278
Query: 191 DVPSWNALIAGCTQ-NGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSM 249
D+ S ALI G +Q N S+ +F++M+ + K + V + L C +
Sbjct: 279 DLLSCTALITGFSQQNNCTSDAFDIFKDMIRMK-------TKMDEVVVSSMLKICTTIAS 331
Query: 250 LQLGKWIHGYVYKND-FFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMIN 308
+ +G+ IHG+ K+ D + NSL+DMY K G + A FE +K + SW S+I
Sbjct: 332 VTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIA 391
Query: 309 CFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYG 368
+ HG E AI ++ +M ++P+ VTF+ LL+AC+H G E G ++ M ++G
Sbjct: 392 GYGRHGNFEKAIDLYNRMEH--ERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHG 449
Query: 369 IEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMS--MEPDEVVWGSLFNGCKVYGRTDLAEF 426
IE + EH C++D+L R+G +EA ++R + WG+ + C+ +G L++
Sbjct: 450 IEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKV 509
Query: 427 AAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKS-YKVPGCSWI 479
AA +LL ++P I LA+VY G WD N +++K+ S K PG S +
Sbjct: 510 AATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCNKAPGYSLV 563
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 158/384 (41%), Gaps = 59/384 (15%)
Query: 50 LTLSNLPYARRIFDHLHSPNIYLYTS--STFS----------LFRRMLCNSNPTTTRPNN 97
L ++ +AR++FD + ++ +T+ S FS LF+ M + + N
Sbjct: 58 LKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEM----HREDVKANQ 113
Query: 98 FIYPHVLKSCHESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMR 157
F Y VLKSC + +K G + + V+ GN
Sbjct: 114 FTYGSVLKSCKD--------LGCLKEGMQIHGSVEK-------------GNCAG------ 146
Query: 158 ERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFRE 217
N++ +A++S YAR G ++ A FD M ERD+ SWNA+I G T N LF+
Sbjct: 147 --NLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQL 204
Query: 218 MVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVD 277
M+ KP+ T L A L++ +HG K F S + SLV+
Sbjct: 205 MLTEG-------KKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVN 257
Query: 278 MYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQ-SEGAIAVFEQMVECGGDVRPD 336
Y KCG+LA A K+ E + L S ++I F+ + A +F+ M+ + D
Sbjct: 258 AYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRM--KTKMD 315
Query: 337 GVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVV 396
V +L CT V G + I + L+D+ ++G ++A+
Sbjct: 316 EVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAF 375
Query: 397 RGMSMEPDEVVWGSLFNGCKVYGR 420
M E D W SL G YGR
Sbjct: 376 EEMK-EKDVRSWTSLIAG---YGR 395
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 98/181 (54%), Gaps = 11/181 (6%)
Query: 167 MISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERG 226
+I Y + GDV A KLFD + +RDV SW A+I+ ++ G+ + + LF+EM
Sbjct: 53 LIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEM-------- 104
Query: 227 YRCN-KPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNL 285
+R + K N T L +C L+ G IHG V K + + + ++L+ +Y +CG +
Sbjct: 105 HREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKM 164
Query: 286 ALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLN 345
AR F+ ++ L SWN+MI+ + + ++ + ++F+ M+ G +PD TF LL
Sbjct: 165 EEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGK--KPDCFTFGSLLR 222
Query: 346 A 346
A
Sbjct: 223 A 223
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 22/191 (11%)
Query: 233 NPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVF 292
+P + AL C + ++ + IHG N F + + + L+D+Y K G++ ARK+F
Sbjct: 11 SPSLYLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLF 70
Query: 293 EMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGL 352
+ + + SW +MI+ F+ G A+ +F++M DV+ + T+ +L +C G
Sbjct: 71 DRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHR--EDVKANQFTYGSVLKSCKDLGC 128
Query: 353 VEQGCSYFEMMTREYGIEPQIEHYGC---------LVDLLGRAGRFDEAMEVVRGMSMEP 403
+++G I +E C L+ L R G+ +EA M E
Sbjct: 129 LKEGMQ----------IHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMK-ER 177
Query: 404 DEVVWGSLFNG 414
D V W ++ +G
Sbjct: 178 DLVSWNAMIDG 188
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 133/281 (47%), Gaps = 27/281 (9%)
Query: 74 TSSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTG---AVHAQIVKTGFEQYPI 130
TS F +F+ M+ T+ + + +LK C S +H +K+ ++ +
Sbjct: 297 TSDAFDIFKDMI----RMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDV 352
Query: 131 -VQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMP- 188
+ +L+D Y++ G + +A F+EM+E++V S+T++I+GY R G+ + A+ L++ M
Sbjct: 353 ALGNSLIDMYAKS-GEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEH 411
Query: 189 ERDVP---SWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACG 245
ER P ++ +L++ C+ G G +++ M+ + G + + ++ L+ G
Sbjct: 412 ERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMI---NKHGIEAREEHLSCIIDMLARSG 468
Query: 246 H-TSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALAR----KVFEMNPDKGL 300
+ L + G V + S + +D + GN+ L++ ++ M P K +
Sbjct: 469 YLEEAYALIRSKEGIVS-----LSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPV 523
Query: 301 TSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFV 341
N + + +A +G + A+ + M E G + G + V
Sbjct: 524 NYIN-LASVYAANGAWDNALNTRKLMKESGSCNKAPGYSLV 563
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 190/405 (46%), Gaps = 44/405 (10%)
Query: 109 ESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRER--NVVSFTA 166
E + + +H +K G P +QTAL+D +R + +AE++FD+ + + T+
Sbjct: 432 EKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTR-CERMADAEEMFDQWPSNLDSSKATTS 490
Query: 167 MISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERG 226
+I GYAR G D A+ LF C Q F E
Sbjct: 491 IIGGYARNGLPDKAVSLFHR-------------TLCEQKLFLDE---------------- 521
Query: 227 YRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLA 286
V+L L+ CG ++G IH Y K +F D + NSL+ MY KC +
Sbjct: 522 --------VSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSD 573
Query: 287 LARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNA 346
A K+F + + SWNS+I+C+ L + A+A++ +M E +++PD +T +++A
Sbjct: 574 DAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNE--KEIKPDIITLTLVISA 631
Query: 347 C--THGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPD 404
T + F M Y IEP EHY V +LG G +EA + + M ++P+
Sbjct: 632 FRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPE 691
Query: 405 EVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRI 464
V +L + C+++ T +A+ AK +L P I+ +N+Y G W +
Sbjct: 692 VSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSEMIREE 751
Query: 465 LKQQKSYKVPGCSWIEIDDQVHQFFSLDQSSPKAEELYSVLESLI 509
++++ K P SWI ++++H F + D S P+ +++Y LE LI
Sbjct: 752 MRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKDIYRGLEILI 796
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 179/380 (47%), Gaps = 21/380 (5%)
Query: 96 NNFIYPHVLKSCHESRST---GAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKV 152
++F +L SC +S +H + ++ G Q V AL+ YS+ + E +
Sbjct: 284 DSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSK-FWDMKKVESL 342
Query: 153 FDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGI 212
++ M ++ V+FT MI+ Y G VDSA+++F + E++ ++NAL+AG +NG + +
Sbjct: 343 YEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKAL 402
Query: 213 RLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFIS 272
+LF +M+ +RG +L A+ ACG S ++ + IHG+ K + I
Sbjct: 403 KLFTDML----QRGVELTD---FSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQ 455
Query: 273 NSLVDMYGKCGNLALARKVFEMNPDKGLTS--WNSMINCFALHGQSEGAIAVFEQMVECG 330
+L+DM +C +A A ++F+ P +S S+I +A +G + A+++F + + C
Sbjct: 456 TALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTL-CE 514
Query: 331 GDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFD 390
+ D V+ +L C G E G + G I L+ + + D
Sbjct: 515 QKLFLDEVSLTLILAVCGTLGFREMGYQ-IHCYALKAGYFSDISLGNSLISMYAKCCDSD 573
Query: 391 EAMEVVRGMSMEPDEVVWGSLFNGCKVYGRT---DLAEFAAKKLLEIDPHNGGYGIMLAN 447
+A+++ M E D + W SL + C + R LA ++ EI P ++++
Sbjct: 574 DAIKIFNTMR-EHDVISWNSLIS-CYILQRNGDEALALWSRMNEKEIKPDIITLTLVISA 631
Query: 448 V-YGELGKWDEVRNVWRILK 466
Y E K R+++ +K
Sbjct: 632 FRYTESNKLSSCRDLFLSMK 651
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 124/277 (44%), Gaps = 17/277 (6%)
Query: 153 FDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGI 212
F ++RE A+IS Y ++G A+ +F + V S+ ALI+G ++ E +
Sbjct: 106 FLKLREEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEAL 165
Query: 213 RLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFIS 272
++F M R +PN T V L+AC S LG IHG + K+ F F+S
Sbjct: 166 KVFFRM------RKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVS 219
Query: 273 NSLVDMYGK-----CGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMV 327
NSL+ +Y K C ++ K+F+ P + + SWN++++ G+S A +F +M
Sbjct: 220 NSLMSLYDKDSGSSCDDVL---KLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMN 276
Query: 328 ECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAG 387
G D T LL++CT ++ +G R G+ ++ L+ +
Sbjct: 277 RVEG-FGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIR-IGLMQELSVNNALIGFYSKFW 334
Query: 388 RFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLA 424
+ +E + M M D V + + +G D A
Sbjct: 335 DMKK-VESLYEMMMAQDAVTFTEMITAYMSFGMVDSA 370
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 169/418 (40%), Gaps = 81/418 (19%)
Query: 15 KSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSPNIYLYT 74
K+ H + LK L+ T LG+A Y L L A +F L SP + YT
Sbjct: 100 KAVHASFLK-LREEKTRLGNALISTY---------LKLGFPREAILVFVSLSSPTVVSYT 149
Query: 75 S--STFS----------LFRRMLCNSNPTTTRPNNFIYPHVLKSC-HESR-STG-AVHAQ 119
+ S FS +F RM +PN + + +L +C SR S G +H
Sbjct: 150 ALISGFSRLNLEIEALKVFFRM---RKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGL 206
Query: 120 IVKTGFEQYPIVQTALVDSYSRGLGG-LGNAEKVFDEMRERNVVSFTAMISGYARVGDVD 178
IVK+GF V +L+ Y + G + K+FDE+ +R+V S+ ++S + G
Sbjct: 207 IVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSH 266
Query: 179 SALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLV 238
A LF EM + GF G+ F TL
Sbjct: 267 KAFDLFYEMNRVE--------------GF---GVDSF--------------------TLS 289
Query: 239 CALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDK 298
LS+C +S+L G+ +HG + + ++N+L+ Y K ++ ++EM +
Sbjct: 290 TLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQ 349
Query: 299 GLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNA-CTHGGLVEQGC 357
++ MI + G + A+ +F + E + +T+ L+ C +G ++
Sbjct: 350 DAVTFTEMITAYMSFGMVDSAVEIFANVTE------KNTITYNALMAGFCRNGHGLKALK 403
Query: 358 SYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGC 415
+ +M+ R G+E VD G + E + G ++ +G+ FN C
Sbjct: 404 LFTDMLQR--GVELTDFSLTSAVDACGLVSE-KKVSEQIHGFCIK-----FGTAFNPC 453
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 187/381 (49%), Gaps = 35/381 (9%)
Query: 58 ARRIFDHLHSP-----NIYL-------YTSSTFSLFRRMLCNSNPTTTRPNNFIYPHVLK 105
ARR+FD + +P N+ + + +F +ML RP N V+
Sbjct: 216 ARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKML----ELNVRPLNHTVSSVML 271
Query: 106 SCHESRST---GAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVV 162
+C S + +HA VK +V T++ D Y + L +A +VFD+ R +++
Sbjct: 272 ACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVK-CDRLESARRVFDQTRSKDLK 330
Query: 163 SFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALA 222
S+T+ +SGYA G A +LFD MPER++ SWNA++ G + E + M
Sbjct: 331 SWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLM---- 386
Query: 223 AERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKC 282
+ VTLV L+ C S +Q+GK HG++Y++ + + ++N+L+DMYGKC
Sbjct: 387 ---RQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKC 443
Query: 283 GNLALARKVF-EMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFV 341
G L A F +M+ + SWN+++ A G+SE A++ FE M + +P T
Sbjct: 444 GTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGM---QVEAKPSKYTLA 500
Query: 342 GLLNACTHGGLVEQGCSYFEMMTRE-YGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMS 400
LL C + + G + + R+ Y I+ I G +VD+ + FD A+EV + +
Sbjct: 501 TLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIR--GAMVDMYSKCRCFDYAIEVFKEAA 558
Query: 401 MEPDEVVWGSLFNGCKVYGRT 421
D ++W S+ GC GR+
Sbjct: 559 TR-DLILWNSIIRGCCRNGRS 578
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/276 (33%), Positives = 146/276 (52%), Gaps = 11/276 (3%)
Query: 158 ERNVVSFTAMISGYARVGDVDSALKLFDEMPE-RDVPSWNALIAGCTQNGFFSEGIRLFR 216
+ NV+ A++ Y + G + SA F +M E RD SWNAL+ G + G + + F
Sbjct: 427 DTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFE 486
Query: 217 EMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLV 276
M A KP+ TL L+ C + L LGK IHG++ ++ + +D I ++V
Sbjct: 487 GMQVEA--------KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMV 538
Query: 277 DMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPD 336
DMY KC A +VF+ + L WNS+I +G+S+ +F ++E G V+PD
Sbjct: 539 DMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELF-MLLENEG-VKPD 596
Query: 337 GVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVV 396
VTF+G+L AC G VE G YF M+ +Y I PQ+EHY C+++L + G + E +
Sbjct: 597 HVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFL 656
Query: 397 RGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLL 432
M +P + + + C+ Y + L +AAK+L+
Sbjct: 657 LLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRLM 692
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 162/406 (39%), Gaps = 77/406 (18%)
Query: 74 TSSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCH---ESRSTGAVHAQIVKTGFEQYPI 130
+ F +FRRM N R + VLKSC + R +H +VK G+
Sbjct: 143 SDEVFRMFRRM----NRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVD 198
Query: 131 VQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPER 190
++T++VD Y G RV + A ++FDE+
Sbjct: 199 LETSIVDVY------------------------------GKCRV--MSDARRVFDEIVNP 226
Query: 191 DVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSML 250
SWN ++ + GF E + +F +M+ L +P T+ + AC + L
Sbjct: 227 SDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNV-------RPLNHTVSSVMLACSRSLAL 279
Query: 251 QLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCF 310
++GK IH K D+ +S S+ DMY KC L AR+VF+ K L SW S ++ +
Sbjct: 280 EVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGY 339
Query: 311 ALHGQSEGAIAVFEQMVE---------CGGDVRP--------------------DGVTFV 341
A+ G + A +F+ M E GG V D VT V
Sbjct: 340 AMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLV 399
Query: 342 GLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSM 401
+LN C+ V+ G + R +G + + L+D+ G+ G A R MS
Sbjct: 400 WILNVCSGISDVQMGKQAHGFIYR-HGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSE 458
Query: 402 EPDEVVWGSLFNGCKVYGRTDLA-EFAAKKLLEIDPHNGGYGIMLA 446
DEV W +L G GR++ A F +E P +LA
Sbjct: 459 LRDEVSWNALLTGVARVGRSEQALSFFEGMQVEAKPSKYTLATLLA 504
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 141/303 (46%), Gaps = 18/303 (5%)
Query: 168 ISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGY 227
I Y + G VD A +LF+EMPERD SWNA+I C QNG E R+FR M G
Sbjct: 103 IEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRM----NRDGV 158
Query: 228 RCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLAL 287
R + + L +CG L+L + +H V K + + + S+VD+YGKC ++
Sbjct: 159 RATE---TSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSD 215
Query: 288 ARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNAC 347
AR+VF+ + SWN ++ + G ++ A+ +F +M+E +VRP T ++ AC
Sbjct: 216 ARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLEL--NVRPLNHTVSSVMLAC 273
Query: 348 THGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVV 407
+ +E G + + + + D+ + R + A V + D
Sbjct: 274 SRSLALEVG-KVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVF-DQTRSKDLKS 331
Query: 408 WGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNG--GYGIMLANVYGELGKWDEVRNVWRIL 465
W S +G + G T A++L ++ P + ML Y +WDE + ++
Sbjct: 332 WTSAMSGYAMSGLTR----EARELFDLMPERNIVSWNAMLGG-YVHAHEWDEALDFLTLM 386
Query: 466 KQQ 468
+Q+
Sbjct: 387 RQE 389
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 79/168 (47%), Gaps = 8/168 (4%)
Query: 270 FISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVEC 329
F+ N ++ YGKCG + AR++FE P++ SWN++I A +G S+ +F +M
Sbjct: 97 FLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRD 156
Query: 330 GGDVRPDGVTFVGLLNACTHGGLV--EQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAG 387
G VR +F G+L +C GL+ + +YG ++ +VD+ G+
Sbjct: 157 G--VRATETSFAGVLKSC---GLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCR 211
Query: 388 RFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEID 435
+A V + + P +V W + G D A K+LE++
Sbjct: 212 VMSDARRVFDEI-VNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELN 258
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/459 (25%), Positives = 199/459 (43%), Gaps = 67/459 (14%)
Query: 94 RPNNFIYPHVLKSCHESRSTGAVHAQIVKTGFEQYP-IVQTALVDSYSRGLGGLGNAEKV 152
RP F + + R +H + +G +Y +V +++D Y R LG A V
Sbjct: 133 RPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRR-LGVFDYALSV 191
Query: 153 FDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPE--------------------RDV 192
F M +R+VVS+ +I + G+ + AL F M E R++
Sbjct: 192 FLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLREL 251
Query: 193 PSWNALIAGCTQNGFFS-------------------EGIRLFREMV--------ALAAER 225
+A C + GF S + ++LFRE+ ++
Sbjct: 252 SKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSY 311
Query: 226 GYRCN----------------KPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDS 269
+ C +P+ T LS+ + ML G +H V K F +D+
Sbjct: 312 SWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSM-NAVMLDHGADVHSLVIKLGFDLDT 370
Query: 270 FISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVEC 329
++ SL++MY K G++ LA VF K L WN++I A + ++ ++A+F Q++
Sbjct: 371 AVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLL-M 429
Query: 330 GGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRF 389
++PD VT +G+L AC + G V +G F M + +G+ P EHY C+++LL R G
Sbjct: 430 NQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMI 489
Query: 390 DEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVY 449
+EA ++ + EP +W + G T LAE AK +LE +P + ++L +Y
Sbjct: 490 NEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIY 549
Query: 450 GELGKWDEVRNVWRILKQQKSYKVPGCSWIEIDDQVHQF 488
+W+ + + + K G S I I+ V F
Sbjct: 550 EMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSF 588
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 151/311 (48%), Gaps = 22/311 (7%)
Query: 95 PNNFIYPHVLKSCHESRS---TGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEK 151
P++ + ++ S+S VHAQ+++ GF + + Y + G + NA +
Sbjct: 2 PSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKS-GSVINALQ 60
Query: 152 VFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEG 211
+FD++ ++N +++ + G + G +++AL LFDEMPERDV SWN +I+G GF G
Sbjct: 61 LFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYG 120
Query: 212 IRLFREMVALAAERGYRCNKPNPVT--LVCALSACGHTSMLQLGKWIHG-YVYKNDFFVD 268
IR+F +M +P T ++ +L C ++ G+ IHG + +
Sbjct: 121 IRVFFDMQRWEI-------RPTEFTFSILASLVTC-----VRHGEQIHGNAICSGVSRYN 168
Query: 269 SFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVE 328
+ NS++DMY + G A VF D+ + SWN +I + G E A+ F M E
Sbjct: 169 LVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMRE 228
Query: 329 CGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGR 388
+++PD T +++ C+ + +G + + + I G +D+ + R
Sbjct: 229 M--EIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIV-LGAGIDMFSKCNR 285
Query: 389 FDEAMEVVRGM 399
D+++++ R +
Sbjct: 286 LDDSVKLFREL 296
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 88/224 (39%), Gaps = 51/224 (22%)
Query: 252 LGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFA 311
L K +H + + F ++ N + +Y K G++ A ++F+ PDK +WN +
Sbjct: 22 LAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLF 81
Query: 312 LHGQSEGAIAVFEQM---------------VECG--------------GDVRPDGVTFVG 342
+G A+ +F++M V CG ++RP TF
Sbjct: 82 KNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSI 141
Query: 343 LLNACT--------HGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAME 394
L + T HG + G S + ++ + ++D+ R G FD A+
Sbjct: 142 LASLVTCVRHGEQIHGNAICSGVSRYNLVV-----------WNSVMDMYRRLGVFDYALS 190
Query: 395 VVRGMSMEPDEVVWGSLFNGCKVYGRTDLA--EFAAKKLLEIDP 436
V M + D V W L C G ++A +F + +EI P
Sbjct: 191 VFLTME-DRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQP 233
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 72/145 (49%), Gaps = 12/145 (8%)
Query: 83 RMLCNSNPTTTRPNNFIYPHVLKSCHESR-STGA-VHAQIVKTGFEQYPIVQTALVDSYS 140
R+ + + RP+ F + VL S + GA VH+ ++K GF+ V T+L++ Y
Sbjct: 322 RLFILAMTQSVRPDKFTFSSVLSSMNAVMLDHGADVHSLVIKLGFDLDTAVATSLMEMYF 381
Query: 141 RGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEM-------PERDVP 193
+ G + A VF + ++++ + +I G AR +L +F+++ P+R
Sbjct: 382 KT-GSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDR--V 438
Query: 194 SWNALIAGCTQNGFFSEGIRLFREM 218
+ ++ C GF +EGI++F M
Sbjct: 439 TLMGILVACCYAGFVNEGIQIFSSM 463
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 129/236 (54%), Gaps = 9/236 (3%)
Query: 160 NVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMV 219
NV T+++ Y++ G + ++LFD + +R+V +W A+I +N GI +FR M+
Sbjct: 452 NVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLML 511
Query: 220 ALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMY 279
L+ R P+ VT+ L+ C L+LGK +HG++ K +F F+S ++ MY
Sbjct: 512 -LSKHR------PDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMY 564
Query: 280 GKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVT 339
GKCG+L A F+ KG +W ++I + + AI FEQMV G P+ T
Sbjct: 565 GKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRG--FTPNTFT 622
Query: 340 FVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEV 395
F +L+ C+ G V++ +F +M R Y ++P EHY +++LL R GR +EA +
Sbjct: 623 FTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 162/346 (46%), Gaps = 35/346 (10%)
Query: 15 KSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSPNIYLYT 74
+ L H KQ+ H+ G +F KLV ++ A+++FD S N+Y +
Sbjct: 123 RRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYT-ACGSVKDAQKVFDESTSSNVYSWN 181
Query: 75 SSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTGA-VHAQIVKTGFEQYPIVQT 133
+ L R + + Y VL + E R G ++ + F+ +
Sbjct: 182 A----LLRGTVISGKKR--------YQDVLSTFTEMRELGVDLNVYSLSNVFKSF----- 224
Query: 134 ALVDSYSRGLG--GLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERD 191
A + +GL L +F+ +V T+++ Y + G V A ++FDE+ ERD
Sbjct: 225 AGASALRQGLKTHALAIKNGLFN-----SVFLKTSLVDMYFKCGKVGLARRVFDEIVERD 279
Query: 192 VPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQ 251
+ W A+IAG N E + LFR M++ E+ Y PN V L L G L+
Sbjct: 280 IVVWGAMIAGLAHNKRQWEALGLFRTMIS--EEKIY----PNSVILTTILPVLGDVKALK 333
Query: 252 LGKWIHGYVYKNDFFVDS-FISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCF 310
LGK +H +V K+ +V+ F+ + L+D+Y KCG++A R+VF + + SW ++++ +
Sbjct: 334 LGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGY 393
Query: 311 ALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQG 356
A +G+ + A+ M + G RPD VT +L C ++QG
Sbjct: 394 AANGRFDQALRSIVWMQQEG--FRPDVVTIATVLPVCAELRAIKQG 437
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 127/307 (41%), Gaps = 60/307 (19%)
Query: 58 ARRIFDHLHSPNIYLYTS------------STFSLFRRMLCNSNPTTTRPNNFIYPHVLK 105
ARR+FD + +I ++ + LFR M+ PN+ I +L
Sbjct: 268 ARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEK---IYPNSVILTTILP 324
Query: 106 SCHESRSTG---AVHAQIVKT-GFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNV 161
+ ++ VHA ++K+ + + P V + L+D Y
Sbjct: 325 VLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLY---------------------- 362
Query: 162 VSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVAL 221
+ GD+ S ++F +R+ SW AL++G NG F + +R +
Sbjct: 363 ----------CKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALR----SIVW 408
Query: 222 AAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGK 281
+ G+R P+ VT+ L C ++ GK IH Y KN F + + SL+ MY K
Sbjct: 409 MQQEGFR---PDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSK 465
Query: 282 CGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFV 341
CG ++F+ + + +W +MI+C+ + I VF M+ RPD VT
Sbjct: 466 CGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKH--RPDSVTMG 523
Query: 342 GLLNACT 348
+L C+
Sbjct: 524 RVLTVCS 530
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 118/270 (43%), Gaps = 13/270 (4%)
Query: 158 ERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNG--FFSEGIRLF 215
E N T ++ Y G V A K+FDE +V SWNAL+ G +G + + + F
Sbjct: 143 ESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTF 202
Query: 216 REMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSL 275
EM L + N +L + S L+ G H KN F F+ SL
Sbjct: 203 TEMRELGVDL-------NVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSL 255
Query: 276 VDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRP 335
VDMY KCG + LAR+VF+ ++ + W +MI A + + A+ +F M+ + P
Sbjct: 256 VDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMIS-EEKIYP 314
Query: 336 DGVTFVGLLNACTHGGLVEQGCS-YFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAME 394
+ V +L ++ G + ++ + +E H G L+DL + G
Sbjct: 315 NSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSG-LIDLYCKCGDMASGRR 373
Query: 395 VVRGMSMEPDEVVWGSLFNGCKVYGRTDLA 424
V G S + + + W +L +G GR D A
Sbjct: 374 VFYG-SKQRNAISWTALMSGYAANGRFDQA 402
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 6/184 (3%)
Query: 233 NPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVF 292
N T L AC L GK +H ++ N + F+ LV MY CG++ A+KVF
Sbjct: 110 NATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVF 169
Query: 293 EMNPDKGLTSWNSMINCFALHGQS--EGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHG 350
+ + + SWN+++ + G+ + ++ F +M E G D+ + + + +
Sbjct: 170 DESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDL--NVYSLSNVFKSFAGA 227
Query: 351 GLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGS 410
+ QG + + G+ + LVD+ + G+ A V + +E D VVWG+
Sbjct: 228 SALRQGLKTHALAIKN-GLFNSVFLKTSLVDMYFKCGKVGLARRVFDEI-VERDIVVWGA 285
Query: 411 LFNG 414
+ G
Sbjct: 286 MIAG 289
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 24/184 (13%)
Query: 57 YARRIFDHLHSPNIYLYTS------------STFSLFRRMLCNSNPTTTRPNNFIYPHVL 104
Y R+FD L N+ +T+ + +FR ML + + RP++ VL
Sbjct: 471 YPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKH----RPDSVTMGRVL 526
Query: 105 KSCHESRSTG---AVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNV 161
C + ++ +H I+K FE P V ++ Y + G L +A FD + +
Sbjct: 527 TVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGK-CGDLRSANFSFDAVAVKGS 585
Query: 162 VSFTAMISGYARVGDVDSALKLFDEMPER----DVPSWNALIAGCTQNGFFSEGIRLFRE 217
+++TA+I Y A+ F++M R + ++ A+++ C+Q GF E R F
Sbjct: 586 LTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNL 645
Query: 218 MVAL 221
M+ +
Sbjct: 646 MLRM 649
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 157/319 (49%), Gaps = 7/319 (2%)
Query: 165 TAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAE 224
+A+I Y + ++++ L+ +P ++ N+L+ G + I EM L +
Sbjct: 355 SALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDII----EMFGLMID 410
Query: 225 RGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGN 284
G ++ T++ ALS S L +H K+ + D +S SL+D Y K G
Sbjct: 411 EGTGIDEVTLSTVLKALSLSLPES-LHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQ 469
Query: 285 LALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLL 344
++RKVF+ + S+IN +A +G + + +M ++ PD VT + +L
Sbjct: 470 NEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDR--MNLIPDEVTILSVL 527
Query: 345 NACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPD 404
+ C+H GLVE+G F+ + +YGI P + Y C+VDLLGRAG ++A ++ + D
Sbjct: 528 SGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDAD 587
Query: 405 EVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRI 464
V W SL C+++ + AA+ L+ ++P N I ++ Y E+G ++ R + I
Sbjct: 588 CVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREI 647
Query: 465 LKQQKSYKVPGCSWIEIDD 483
++ + G S + + +
Sbjct: 648 AASRELMREIGYSSVVVKN 666
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 153/351 (43%), Gaps = 56/351 (15%)
Query: 160 NVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMV 219
N+ ++ Y+ GD+ +++ F+ +PE+DV SWN++++ C G + + LF +M
Sbjct: 248 NIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKM- 306
Query: 220 ALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSF-ISNSLVDM 278
+ +P+ + L+ C S +Q GK IH YV K F V S + ++L+DM
Sbjct: 307 ------QFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDM 360
Query: 279 YGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGV 338
YGKC + + +++ P L NS++ G ++ I +F M++ G + D V
Sbjct: 361 YGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGI--DEV 418
Query: 339 TFVGLLNA-----------CT--HGGLVEQG--------CSYFEMMT--------REYGI 369
T +L A CT H ++ G CS + T R+
Sbjct: 419 TLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFD 478
Query: 370 EPQIEHYGCLVDLL---GRAGRFDEAMEVVR---GMSMEPDEVVWGSLFNGCKVYGRTDL 423
E + CL ++ R G + ++++R M++ PDEV S+ +GC G +
Sbjct: 479 ELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEE 538
Query: 424 AEFAAKKLLEIDPHNGGYGI-----MLANVYGELGKWDEVRNVWRILKQQK 469
E L D YGI + A + LG+ V R+L Q +
Sbjct: 539 GE------LIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQAR 583
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 120/267 (44%), Gaps = 45/267 (16%)
Query: 94 RPNNFIYPHVLKSCHES---RSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAE 150
R + +P VL C + R VH +++ GF V++ALV GL
Sbjct: 109 RESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALV--------GL---- 156
Query: 151 KVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSE 210
YA + VD ALKLFDEM +R++ N L+ Q G E
Sbjct: 157 --------------------YACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTG---E 193
Query: 211 GIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDS- 269
RLF + + E + N +T + C H ++ GK +H V K+ + + +
Sbjct: 194 SKRLFEVYLRMELEGVAK----NGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNI 249
Query: 270 FISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVEC 329
F++N LVD Y CG+L+ + + F P+K + SWNS+++ A +G ++ +F +M
Sbjct: 250 FVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFW 309
Query: 330 GGDVRPDGVTFVGLLNACTHGGLVEQG 356
G RP F+ LN C+ ++ G
Sbjct: 310 GK--RPSIRPFMSFLNFCSRNSDIQSG 334
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 114/252 (45%), Gaps = 10/252 (3%)
Query: 168 ISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGY 227
I + G++ SA + FDEM RDV ++N LI+G ++ G I L+ EMV+
Sbjct: 53 IDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGL---- 108
Query: 228 RCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLAL 287
+ + T LS C + G +H V F + F+ ++LV +Y + +
Sbjct: 109 ---RESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDV 165
Query: 288 ARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNAC 347
A K+F+ D+ L N ++ CF G+S+ V+ +M E G V +G+T+ ++ C
Sbjct: 166 ALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRM-ELEG-VAKNGLTYCYMIRGC 223
Query: 348 THGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVV 407
+H LV +G ++ + I LVD G +M + E D +
Sbjct: 224 SHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVP-EKDVIS 282
Query: 408 WGSLFNGCKVYG 419
W S+ + C YG
Sbjct: 283 WNSIVSVCADYG 294
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 11/132 (8%)
Query: 91 TTTRPNNFIYPHVLKSCHESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAE 150
T + + P L SC VH +K+G+ V +L+D+Y++ G +
Sbjct: 422 TVLKALSLSLPESLHSC------TLVHCCAIKSGYAADVAVSCSLIDAYTKS-GQNEVSR 474
Query: 151 KVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPER----DVPSWNALIAGCTQNG 206
KVFDE+ N+ T++I+GYAR G +K+ EM D + ++++GC+ +G
Sbjct: 475 KVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSG 534
Query: 207 FFSEGIRLFREM 218
EG +F +
Sbjct: 535 LVEEGELIFDSL 546
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 107/193 (55%), Gaps = 2/193 (1%)
Query: 244 CGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSW 303
CG LQ K +HG + + +D ++ L++MY CG A VFE +K L +W
Sbjct: 264 CGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETW 323
Query: 304 NSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMM 363
+I CFA +G E AI +F + E G PDG F G+ AC G V++G +FE M
Sbjct: 324 CIIIRCFAKNGFGEDAIDMFSRFKEEGN--IPDGQLFRGIFYACGMLGDVDEGLLHFESM 381
Query: 364 TREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDL 423
+R+YGI P IE Y LV++ G DEA+E V M MEP+ VW +L N +V+G +L
Sbjct: 382 SRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLEL 441
Query: 424 AEFAAKKLLEIDP 436
++ A+ + +DP
Sbjct: 442 GDYCAEVVEFLDP 454
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 112/450 (24%), Positives = 189/450 (42%), Gaps = 65/450 (14%)
Query: 13 LGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHSPNIYL 72
L SN + +K++ A ++ L+ C + L +L YAR++FD + N
Sbjct: 92 LQSSNGMRLIKRIHAMALKCFDDQVIYFGNNLISSC-VRLGDLVYARKVFDSMPEKNTVT 150
Query: 73 YTS------------STFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCH---ESRSTGAVH 117
+T+ F+LF + + T N ++ +L C E VH
Sbjct: 151 WTAMIDGYLKYGLEDEAFALFEDYVKHGIRFT---NERMFVCLLNLCSRRAEFELGRQVH 207
Query: 118 AQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDV 177
+VK G N++ ++++ YA+ G++
Sbjct: 208 GNMVKVGVG---------------------------------NLIVESSLVYFYAQCGEL 234
Query: 178 DSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTL 237
SAL+ FD M E+DV SW A+I+ C++ G + I +F M+ PN T+
Sbjct: 235 TSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLN-------HWFLPNEFTV 287
Query: 238 VCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPD 297
L AC L+ G+ +H V K D F+ SL+DMY KCG ++ RKVF+ +
Sbjct: 288 CSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSN 347
Query: 298 KGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGC 357
+ +W S+I A G E AI++F M + + +T V +L AC G + G
Sbjct: 348 RNTVTWTSIIAAHAREGFGEEAISLFRIMKR--RHLIANNLTVVSILRACGSVGALLLGK 405
Query: 358 SYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKV 417
+ + IE + LV L + G +A V++ + D V W ++ +GC
Sbjct: 406 ELHAQIIKN-SIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLP-SRDVVSWTAMISGCSS 463
Query: 418 YGRTDLAEFAAKKLLE--IDPHNGGYGIML 445
G A K++++ ++P+ Y L
Sbjct: 464 LGHESEALDFLKEMIQEGVEPNPFTYSSAL 493
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 134/307 (43%), Gaps = 66/307 (21%)
Query: 59 RRIFDHLHSPNIYLYTS------------STFSLFRRMLCNSNPTTTRPNNFIYPHVLKS 106
R++FD + + N +TS SLFR M NN +L++
Sbjct: 339 RKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIM----KRRHLIANNLTVVSILRA 394
Query: 107 CHESRSTGAV------HAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERN 160
C S GA+ HAQI+K E +N
Sbjct: 395 CG---SVGALLLGKELHAQIIKNSIE--------------------------------KN 419
Query: 161 VVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVA 220
V + ++ Y + G+ A + ++P RDV SW A+I+GC+ G SE + +EM+
Sbjct: 420 VYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQ 479
Query: 221 LAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYG 280
E PNP T AL AC ++ L +G+ IH KN + F+ ++L+ MY
Sbjct: 480 EGVE-------PNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYA 532
Query: 281 KCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTF 340
KCG ++ A +VF+ P+K L SW +MI +A +G A+ + +M G +V D F
Sbjct: 533 KCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEV--DDYIF 590
Query: 341 VGLLNAC 347
+L+ C
Sbjct: 591 ATILSTC 597
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 149/347 (42%), Gaps = 51/347 (14%)
Query: 95 PNNFIYPHVLKSCHESRSTG---AVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEK 151
PN F +LK+C E ++ VH+ +VK + V T+L+D Y
Sbjct: 282 PNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMY------------ 329
Query: 152 VFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEG 211
A+ G++ K+FD M R+ +W ++IA + GF E
Sbjct: 330 --------------------AKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEA 369
Query: 212 IRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFI 271
I LFR M R N +T+V L ACG L LGK +H + KN + +I
Sbjct: 370 ISLFRIM-------KRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYI 422
Query: 272 SNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMIN-CFALHGQSEGAIAVFEQMVECG 330
++LV +Y KCG A V + P + + SW +MI+ C +L +SE A+ ++M++ G
Sbjct: 423 GSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESE-ALDFLKEMIQEG 481
Query: 331 GDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFD 390
V P+ T+ L AC + + G S + + + + + L+ + + G
Sbjct: 482 --VEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHAL-SNVFVGSALIHMYAKCGFVS 538
Query: 391 EAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPH 437
EA V M E + V W ++ G Y R A K + ++
Sbjct: 539 EAFRVFDSMP-EKNLVSWKAMIMG---YARNGFCREALKLMYRMEAE 581
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 125/224 (55%), Gaps = 6/224 (2%)
Query: 213 RLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFIS 272
RL+++ + L + P+ V +C + L+ K +H + ++ F D ++
Sbjct: 219 RLYKDAIELLDKGAM----PDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLN 274
Query: 273 NSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGD 332
N ++ M+G+C ++ A++VF+ DK + SW+ M+ ++ +G + A+ +FE+M + G
Sbjct: 275 NMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHG-- 332
Query: 333 VRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEA 392
++P+ TF+ + AC G +E+ +F+ M E+GI P+ EHY ++ +LG+ G EA
Sbjct: 333 LKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEA 392
Query: 393 MEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDP 436
+ +R + EP W ++ N +++G DL ++ + ++++DP
Sbjct: 393 EQYIRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVDP 436
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 85/200 (42%), Gaps = 19/200 (9%)
Query: 143 LGGLGNAEKVFD---EMRERNVVSFTAM-ISGYARVGDVDSALKLFDEMPERDVPSWNAL 198
L L +++KV D + + R M IS + + A ++FD M ++D+ SW+ +
Sbjct: 249 LKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLM 308
Query: 199 IAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHG 258
+ + NG + + LF EM KPN T + AC ++ ++H
Sbjct: 309 MCAYSDNGMGDDALHLFEEMTKHGL-------KPNEETFLTVFLACATVGGIEEA-FLHF 360
Query: 259 YVYKNDFFVDSFISNSL--VDMYGKCGNLALARKVFEMNP-DKGLTSWNSMINCFALHGQ 315
KN+ + + L + + GKCG+L A + P + W +M N LHG
Sbjct: 361 DSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHGD 420
Query: 316 SEGAIAVFEQMVECGGDVRP 335
I + + M E DV P
Sbjct: 421 ----IDLEDYMEELMVDVDP 436
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 110/219 (50%), Gaps = 7/219 (3%)
Query: 217 EMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLV 276
E++ GY + P L CG LQ K +H ++ + D NS++
Sbjct: 167 EIIKSWRNEGYVVDLPR---LFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSII 223
Query: 277 DMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPD 336
+MY CG++ A VF P++ L +W +I CFA +GQ E AI F + + G +PD
Sbjct: 224 EMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGN--KPD 281
Query: 337 GVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVV 396
G F + AC G + +G +FE M +EYGI P +EHY LV +L G DEA+ V
Sbjct: 282 GEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFV 341
Query: 397 RGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEID 435
SMEP+ +W +L N +V+G L + + ++D
Sbjct: 342 E--SMEPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLD 378
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 102/197 (51%), Gaps = 12/197 (6%)
Query: 244 CGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSW 303
CG L+ + +H + D N++++MY C ++ A KVFE P+ W
Sbjct: 129 CGKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPE-----W 183
Query: 304 NS-----MINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCS 358
NS M+ CF +G E AI +F + E G +P+G F + + CT G V++G
Sbjct: 184 NSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGN--KPNGEIFNQVFSTCTLTGDVKEGSL 241
Query: 359 YFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWGSLFNGCKVY 418
F+ M REYGI P +EHY + +L +G DEA+ V M MEP VW +L N +V+
Sbjct: 242 QFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVH 301
Query: 419 GRTDLAEFAAKKLLEID 435
G +L + A+ + ++D
Sbjct: 302 GDVELGDRCAELVEKLD 318
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 80/187 (42%), Gaps = 10/187 (5%)
Query: 160 NVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMV 219
+V + A+I Y+ VD ALK+F+EMPE + + ++ NG+ E I LF
Sbjct: 153 DVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRF- 211
Query: 220 ALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFIS-NSLVDM 278
E G NKPN S C T ++ G +Y+ V S +S+ M
Sbjct: 212 ---KEEG---NKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKM 265
Query: 279 YGKCGNLALARKVFEMNP-DKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDG 337
G+L A E P + + W +++N +HG E E +VE R D
Sbjct: 266 LATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAE-LVEKLDATRLDK 324
Query: 338 VTFVGLL 344
V+ GL+
Sbjct: 325 VSSAGLV 331
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 115/224 (51%), Gaps = 9/224 (4%)
Query: 212 IRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFI 271
IR E++ + ++GY + P + L CG L+ + +H + +D+
Sbjct: 93 IREALEVIDILEDKGYIVDFPRLLGLA---KLCGEVEALEEARVVHDCITP----LDARS 145
Query: 272 SNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGG 331
+++++MY C + A VF P + +W +MI C A +G+ E AI +F + +E G
Sbjct: 146 YHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGN 205
Query: 332 DVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDE 391
+PD F + AC G + +G +FE M R+YG+ +E Y ++++L G DE
Sbjct: 206 --KPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDE 263
Query: 392 AMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEID 435
A++ V M++EP +W +L N C V G +L + A+ + ++D
Sbjct: 264 ALDFVERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLD 307
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 73/175 (41%), Gaps = 9/175 (5%)
Query: 145 GLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQ 204
L A V D + + S+ +I Y+ D AL +F+EMP+R+ +W +I +
Sbjct: 127 ALEEARVVHDCITPLDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAK 186
Query: 205 NGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKND 264
NG I +F + E G NKP+ AC + G +Y++
Sbjct: 187 NGEGERAIDMFTRFI----EEG---NKPDKEIFKAVFFACVSIGDINEGLLHFESMYRDY 239
Query: 265 FFVDSFISN-SLVDMYGKCGNLALARKVFE-MNPDKGLTSWNSMINCFALHGQSE 317
V S ++++M CG+L A E M + + W +++N + G E
Sbjct: 240 GMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLE 294
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 150/325 (46%), Gaps = 29/325 (8%)
Query: 94 RPNNFIYPHVLKSC----HESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNA 149
RPN Y V+ +C E + ++ + G + I +L+ SRG G A
Sbjct: 300 RPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRG-GLWEAA 358
Query: 150 EKVFDEMR----ERNVVSFTAMISGYARVGDVDSALKLFDEMPER----DVPSWNALIAG 201
+FDEM E++V S+ ++ + G +D A ++ +MP + +V S++ +I G
Sbjct: 359 RNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDG 418
Query: 202 CTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTS-MLQLGKWIHGYV 260
+ G F E + LF EM L G ++ + TL+ + G + L + + +
Sbjct: 419 FAKAGRFDEALNLFGEMRYL----GIALDRVSYNTLLSIYTKVGRSEEALDILREMASVG 474
Query: 261 YKNDFFVDSFISNSLVDMYGKCGNLALARKVF-EMNPD---KGLTSWNSMINCFALHGQS 316
K D N+L+ YGK G +KVF EM + L +++++I+ ++ G
Sbjct: 475 IKKDVVT----YNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLY 530
Query: 317 EGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHY 376
+ A+ +F + G +R D V + L++A GLV S + MT+E GI P + Y
Sbjct: 531 KEAMEIFREFKSAG--LRADVVLYSALIDALCKNGLVGSAVSLIDEMTKE-GISPNVVTY 587
Query: 377 GCLVDLLGRAGRFDEAMEVVRGMSM 401
++D GR+ D + + G S+
Sbjct: 588 NSIIDAFGRSATMDRSADYSNGGSL 612
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 124/266 (46%), Gaps = 22/266 (8%)
Query: 161 VVSFTAMISGYARVGDVDSALKLFDEMPE----RDVPSWNALIAGCTQNGF-FSEGIRLF 215
V +F+A+IS Y R G + A+ +F+ M E ++ ++NA+I C + G F + + F
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFF 327
Query: 216 REMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSL 275
EM + P+ +T L+ C + + + + + D F N+L
Sbjct: 328 DEMQRNGVQ-------PDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTL 380
Query: 276 VDMYGKCGNLALARKVFEMNPDK----GLTSWNSMINCFALHGQSEGAIAVFEQMVECGG 331
+D K G + LA ++ P K + S++++I+ FA G+ + A+ +F +M G
Sbjct: 381 LDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLG- 439
Query: 332 DVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDE 391
+ D V++ LL+ T G E+ M GI+ + Y L+ G+ G++DE
Sbjct: 440 -IALDRVSYNTLLSIYTKVGRSEEALDILREMA-SVGIKKDVVTYNALLGGYGKQGKYDE 497
Query: 392 AMEVVRGMSME---PDEVVWGSLFNG 414
+V M E P+ + + +L +G
Sbjct: 498 VKKVFTEMKREHVLPNLLTYSTLIDG 523
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 115/252 (45%), Gaps = 13/252 (5%)
Query: 221 LAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYG 280
A +R R N+ + +S G + + K I + + + ++L+ YG
Sbjct: 221 FAVKRERRKNEQGKLA-SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYG 279
Query: 281 KCGNLALARKVFEMNPDKGL----TSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPD 336
+ G A VF + GL ++N++I+ G +A F ++ G V+PD
Sbjct: 280 RSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNG-VQPD 338
Query: 337 GVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVV 396
+TF LL C+ GGL E + F+ MT IE + Y L+D + + G+ D A E++
Sbjct: 339 RITFNSLLAVCSRGGLWEAARNLFDEMTNRR-IEQDVFSYNTLLDAICKGGQMDLAFEIL 397
Query: 397 RGMSME---PDEVVWGSLFNGCKVYGRTD--LAEFAAKKLLEIDPHNGGYGIMLANVYGE 451
M ++ P+ V + ++ +G GR D L F + L I Y +L+ +Y +
Sbjct: 398 AQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLS-IYTK 456
Query: 452 LGKWDEVRNVWR 463
+G+ +E ++ R
Sbjct: 457 VGRSEEALDILR 468
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 151/359 (42%), Gaps = 54/359 (15%)
Query: 150 EKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPER----DVPSWNALIAGCTQN 205
+K + M + +VV+ +IS + G V SA +F+ + E DV S+ +LI+ +
Sbjct: 164 QKDYQSMLDNSVVAI--IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANS 221
Query: 206 GFFSEGIRLFREM---------------VALAAERGYRCNK--------------PNPVT 236
G + E + +F++M + + + G NK P+ T
Sbjct: 222 GRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYT 281
Query: 237 LVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNP 296
++ C S+ Q + + F D N+L+D+YGK A KV
Sbjct: 282 YNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMV 341
Query: 297 DKG----LTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGL 352
G + ++NS+I+ +A G + A+ + QM E G +PD T+ LL+ G
Sbjct: 342 LNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKG--TKPDVFTYTTLLSGFERAGK 399
Query: 353 VEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMS---MEPDEVVWG 409
VE S FE M R G +P I + + + G G+F E M++ ++ + PD V W
Sbjct: 400 VESAMSIFEEM-RNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWN 458
Query: 410 SLFNGCKVYGRTDLAE-----FAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWR 463
+L V+G+ + F K P + +++ Y G +++ V+R
Sbjct: 459 TLL---AVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLIS-AYSRCGSFEQAMTVYR 513
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 155/344 (45%), Gaps = 37/344 (10%)
Query: 103 VLKSCHESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRER--- 159
V H + V ++V GF + +L+ +Y+R G L A ++ ++M E+
Sbjct: 323 VYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARD-GMLDEAMELKNQMAEKGTK 381
Query: 160 -NVVSFTAMISGYARVGDVDSALKLFDEMP----ERDVPSWNALIAGCTQNGFFSEGIRL 214
+V ++T ++SG+ R G V+SA+ +F+EM + ++ ++NA I G F+E +++
Sbjct: 382 PDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKI 441
Query: 215 FREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNS 274
F E+ P+ VT L+ G M + + + F + N+
Sbjct: 442 FDEINVCGLS-------PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNT 494
Query: 275 LVDMYGKCGNLALARKVFEMNPDKGLT----SWNSMINCFALHGQSEGAIAVFEQMVECG 330
L+ Y +CG+ A V+ D G+T ++N+++ A G E + V +M +
Sbjct: 495 LISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMED-- 552
Query: 331 GDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLV------DLLG 384
G +P+ +T+ LL+A +G + S E + IEP+ LV DLL
Sbjct: 553 GRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGV-IEPRAVLLKTLVLVCSKCDLLP 611
Query: 385 RAGR-FDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFA 427
A R F E E RG S PD S+ + +YGR + A
Sbjct: 612 EAERAFSELKE--RGFS--PDITTLNSMVS---IYGRRQMVAKA 648
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 135/330 (40%), Gaps = 48/330 (14%)
Query: 152 VFDEMRERNVV----SFTAMISGYARVGDVDSALKLFDEMPER----DVPSWNALIAGCT 203
VF EM+ V +F +IS Y+R G + A+ ++ M + D+ ++N ++A
Sbjct: 476 VFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALA 535
Query: 204 QNGFFSEGIRLFREMV----------------------------ALAAERGYRCNKPNPV 235
+ G + + ++ EM +LA E +P V
Sbjct: 536 RGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAV 595
Query: 236 TLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMN 295
L + C +L + + + F D NS+V +YG+ +A A V +
Sbjct: 596 LLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYM 655
Query: 296 PDKGLT----SWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGG 351
++G T ++NS++ + + + +++ G ++PD +++ ++ A
Sbjct: 656 KERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKG--IKPDIISYNTVIYAYCRNT 713
Query: 352 LVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGM---SMEPDEVVW 408
+ F M R GI P + Y + F+EA+ VVR M P++ +
Sbjct: 714 RMRDASRIFSEM-RNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTY 772
Query: 409 GSLFNG-CKVYGRTDLAEFAAKKLLEIDPH 437
S+ +G CK+ R D A+ + L +DPH
Sbjct: 773 NSIVDGYCKL-NRKDEAKLFVEDLRNLDPH 801
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 160/356 (44%), Gaps = 37/356 (10%)
Query: 113 TGAV---HAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERN----VVSFT 165
TG + + +I+ GF V L++ + + G + +A+KVFDE+ +R+ VVSF
Sbjct: 221 TGTIWGFYMEILDAGFPLNVYVFNILMNKFCKE-GNISDAQKVFDEITKRSLQPTVVSFN 279
Query: 166 AMISGYARVGDVDSALKLFDEMPER----DVPSWNALIAGCTQNGFFSEGIRLFREMVAL 221
+I+GY +VG++D +L +M + DV +++ALI + LF EM
Sbjct: 280 TLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEM--- 336
Query: 222 AAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGK 281
+RG PN V + + L K + + D + N+LV+ + K
Sbjct: 337 -CKRGL---IPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCK 392
Query: 282 CGNLALARKVFE------MNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRP 335
G+L AR + + + PDK ++ ++I+ F G E A+ + ++M + G +
Sbjct: 393 NGDLVAARNIVDGMIRRGLRPDK--ITYTTLIDGFCRGGDVETALEIRKEMDQNG--IEL 448
Query: 336 DGVTFVGLL-NACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAME 394
D V F L+ C G +++ + EM+ GI+P Y ++D + G +
Sbjct: 449 DRVGFSALVCGMCKEGRVIDAERALREML--RAGIKPDDVTYTMMMDAFCKKGDAQTGFK 506
Query: 395 VVRGMSME---PDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEID--PHNGGYGIML 445
+++ M + P V + L NG G+ A+ +L I P + Y +L
Sbjct: 507 LLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLL 562
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 142/324 (43%), Gaps = 25/324 (7%)
Query: 158 ERNVVSFTAMISGYARVGDVDSALKLFDEMP----ERDVPSWNALIAGCTQNGFFSEGIR 213
E V FT +I G+A+ G VDSAL L DEM + D+ +N I + G +
Sbjct: 200 EPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWK 259
Query: 214 LFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISN 273
F E+ A KP+ VT + + L + ++ KN ++ N
Sbjct: 260 FFHEIEANGL-------KPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYN 312
Query: 274 SLVDMYGKCGNLALARKVFEMNPDKG----LTSWNSMINCFALHGQSEGAIAVFEQMVEC 329
+++ YG G A + E KG + ++N ++ C G+ + A+ VFE+M +
Sbjct: 313 TMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK- 371
Query: 330 GGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRF 389
D P+ T+ L++ G ++ + M + G+ P + +VD L ++ +
Sbjct: 372 --DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKA-GLFPNVRTVNIMVDRLCKSQKL 428
Query: 390 DEAMEVVRGMSME---PDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGG--YGIM 444
DEA + M + PDE+ + SL +G GR D A +K+L+ D Y +
Sbjct: 429 DEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSL 488
Query: 445 LANVYGELGKWDEVRNVWRILKQQ 468
+ N + G+ ++ +++ + Q
Sbjct: 489 IKNFFNH-GRKEDGHKIYKDMINQ 511
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 137/344 (39%), Gaps = 63/344 (18%)
Query: 141 RGLGGLGNAEKVFDEMRER---NVVSFTAMISGYARVGDVDSALKLFDEMPER----DVP 193
R +G + A KVF+EM++ N+ ++ +I R G +D+A +L D M + +V
Sbjct: 354 RKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVR 413
Query: 194 SWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLG 253
+ N ++ ++ E +F EM Y+ P+ +T + G +
Sbjct: 414 TVNIMVDRLCKSQKLDEACAMFEEM-------DYKVCTPDEITFCSLIDGLGKVGRVDDA 466
Query: 254 KWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFE----MNPDKGLTSWNSMINC 309
++ + +D +S + SL+ + G K+++ N L N+ ++C
Sbjct: 467 YKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDC 526
Query: 310 FALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLV-----------EQGCS 358
G+ E A+FE++ PD ++ L++ G EQGC
Sbjct: 527 MFKAGEPEKGRAMFEEIK--ARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCV 584
Query: 359 YFEMMTREY--------------------------GIEPQIEHYGCLVDLLGRAGRFDEA 392
+ TR Y G EP + YG ++D L + R DEA
Sbjct: 585 ---LDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEA 641
Query: 393 ---MEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLE 433
E + +E + V++ SL +G GR D A ++L++
Sbjct: 642 YMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQ 685
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 136/323 (42%), Gaps = 40/323 (12%)
Query: 58 ARRIFDHLHSPNIYL-------YTSSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCHES 110
ARR S +I + + + T+ LF M TR N + K C +
Sbjct: 545 ARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCK-CGKV 603
Query: 111 RSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMR----ERNVVSFTA 166
+ ++ GFE + +++D ++ + L A +F+E + E NVV +++
Sbjct: 604 NKAYQLLEEMKTKGFEPTVVTYGSVIDGLAK-IDRLDEAYMLFEEAKSKRIELNVVIYSS 662
Query: 167 MISGYARVGDVDSALKLFDEMPER----DVPSWNALIAGCTQNGFFSEGIRLFREMVALA 222
+I G+ +VG +D A + +E+ ++ ++ +WN+L+ + +E + F+ M L
Sbjct: 663 LIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKEL- 721
Query: 223 AERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVY-----KNDFFVDSFISNSLVD 277
+C PN VT ++ + ++ K+ +V+ K + +++
Sbjct: 722 -----KCT-PNQVTYGILING-----LCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMIS 770
Query: 278 MYGKCGNLALARKVFEMNPDKG----LTSWNSMINCFALHGQSEGAIAVFEQMVECGGDV 333
K GN+A A +F+ G +N+MI + ++ A ++FE+ G +
Sbjct: 771 GLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPI 830
Query: 334 RPDGVTFVGLLNACTHGGLVEQG 356
T V LL+ +EQ
Sbjct: 831 H--NKTCVVLLDTLHKNDCLEQA 851
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 138/287 (48%), Gaps = 29/287 (10%)
Query: 144 GGLGNAEKVFDEMRER----NVVSFTAMISGYARVGDVDSALKLFDEMP----ERDVPSW 195
G +G A +V +MR + NV S+T ++ G+ ++G +D A + +EM + + +
Sbjct: 403 GLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGF 462
Query: 196 NALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKW 255
N LI+ + E + +FREM +G C KP+ T +S ++ W
Sbjct: 463 NCLISAFCKEHRIPEAVEIFREM----PRKG--C-KPDVYTFNSLISGLCEVDEIKHALW 515
Query: 256 IHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARK-----VFEMNPDKGLTSWNSMINCF 310
+ + ++ N+L++ + + G + ARK VF+ +P +T +NS+I
Sbjct: 516 LLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEIT-YNSLIKGL 574
Query: 311 ALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSY-FEMMTREYGI 369
G+ + A ++FE+M+ G P ++ L+N G+VE+ + EM+ R G
Sbjct: 575 CRAGEVDKARSLFEKMLRDGH--APSNISCNILINGLCRSGMVEEAVEFQKEMVLR--GS 630
Query: 370 EPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSME---PDEVVWGSLFN 413
P I + L++ L RAGR ++ + + R + E PD V + +L +
Sbjct: 631 TPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMS 677
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 130/305 (42%), Gaps = 28/305 (9%)
Query: 125 FEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNV----VSFTAMISGYARVGDVDSA 180
F+ Y +V LV + A VF +M R + +F ++ + V ++DSA
Sbjct: 182 FKSYNVVLEILVSGNCHKV-----AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSA 236
Query: 181 LKLFDEMPERD-VPS---WNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVT 236
L L +M + VP+ + LI ++ +E ++L EM + P+ T
Sbjct: 237 LSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGC-------VPDAET 289
Query: 237 L-VCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMN 295
L C + + K ++ + + F D L++ K G + A+ +F
Sbjct: 290 FNDVILGLCKFDRINEAAKMVNRMLIRG-FAPDDITYGYLMNGLCKIGRVDAAKDLFYRI 348
Query: 296 PDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQ 355
P + +N++I+ F HG+ + A AV MV G V PD T+ L+ GLV
Sbjct: 349 PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIV-PDVCTYNSLIYGYWKEGLVGL 407
Query: 356 GCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMS---MEPDEVVWGSLF 412
M R G +P + Y LVD + G+ DEA V+ MS ++P+ V + L
Sbjct: 408 ALEVLHDM-RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLI 466
Query: 413 NG-CK 416
+ CK
Sbjct: 467 SAFCK 471
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 127/338 (37%), Gaps = 86/338 (25%)
Query: 162 VSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVA- 220
+++ +++G ++G VD+A LF +P+ ++ +N LI G +G + + +MV
Sbjct: 323 ITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTS 382
Query: 221 ------------------------LAAE-----RGYRCNKPNPVTLVCALSACGHTSMLQ 251
LA E R C KPN + + +
Sbjct: 383 YGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGC-KPNVYSYTILVDG-----FCK 436
Query: 252 LGKWIHGYVYKNDFFVDSFISNS-----LVDMYGKCGNLALARKVFEMNPDKG------- 299
LGK Y N+ D N+ L+ + K + A ++F P KG
Sbjct: 437 LGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYT 496
Query: 300 --------------------------------LTSWNSMINCFALHGQSEGAIAVFEQMV 327
++N++IN F G+ + A + +MV
Sbjct: 497 FNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 556
Query: 328 ECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAG 387
G + D +T+ L+ G V++ S FE M R+ G P L++ L R+G
Sbjct: 557 FQGSPL--DEITYNSLIKGLCRAGEVDKARSLFEKMLRD-GHAPSNISCNILINGLCRSG 613
Query: 388 RFDEAMEVVRGMSME---PDEVVWGSLFNGCKVYGRTD 422
+EA+E + M + PD V + SL NG GR +
Sbjct: 614 MVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIE 651
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 144/335 (42%), Gaps = 48/335 (14%)
Query: 107 CHESRSTGAVHA--QIVKTGFEQYPIVQTALVDSYSRGL---GGLGNAEKVFDEMRER-- 159
CH R + AV Q+V+ G+ I T L+ GL A + D M +R
Sbjct: 166 CHGKRISDAVALVDQMVEMGYRPDTITFTTLI----HGLFLHNKASEAVALVDRMVQRGC 221
Query: 160 --NVVSFTAMISGYARVGDVDSALKLFDEMP----ERDVPSWNALIAGCTQNGFFSEGIR 213
N+V++ +++G + GD D AL L ++M E DV +N +I + + +
Sbjct: 222 QPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 281
Query: 214 LFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSF--- 270
LF+EM +G R PN VT +S + G+W +D
Sbjct: 282 LFKEM----ETKGIR---PNVVTYSSLISC-----LCSYGRWSDASQLLSDMIEKKINPN 329
Query: 271 --ISNSLVDMYGKCGNLALARKVFE------MNPDKGLTSWNSMINCFALHGQSEGAIAV 322
N+L+D + K G A K+++ ++PD + ++NS++N F +H + + A +
Sbjct: 330 LVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD--IFTYNSLVNGFCMHDRLDKAKQM 387
Query: 323 FEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDL 382
FE MV D PD VT+ L+ VE G F M+ G+ Y L+
Sbjct: 388 FEFMVS--KDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHR-GLVGDTVTYTTLIQG 444
Query: 383 LGRAGRFDEAMEVVRGM---SMEPDEVVWGSLFNG 414
L G D A +V + M + PD + + L +G
Sbjct: 445 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 479
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 123/272 (45%), Gaps = 24/272 (8%)
Query: 158 ERNVVSFTAMISGYARVGDVDSALKLFDEMPER----DVPSWNALIAGCTQNGFFSEGIR 213
E ++V+ +++++GY + A+ L D+M E D ++ LI G + SE +
Sbjct: 152 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 211
Query: 214 LFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISN 273
L MV +RG C +PN VT ++ L + + D I N
Sbjct: 212 LVDRMV----QRG--C-QPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFN 264
Query: 274 SLVDMYGKCGNLALARKVFEMNPDKGL----TSWNSMINCFALHGQSEGAIAVFEQMVEC 329
+++D K ++ A +F+ KG+ +++S+I+C +G+ A + M+E
Sbjct: 265 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE- 323
Query: 330 GGDVRPDGVTFVGLLNA-CTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGR 388
+ P+ VTF L++A G VE Y +M+ R I+P I Y LV+ R
Sbjct: 324 -KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS--IDPDIFTYNSLVNGFCMHDR 380
Query: 389 FDEAMEVVRGMSME---PDEVVWGSLFNG-CK 416
D+A ++ M + PD V + +L G CK
Sbjct: 381 LDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 412
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 124/286 (43%), Gaps = 60/286 (20%)
Query: 144 GGLGNAEKVFDEMRER----NVVSFTAMISGYARVGDVDSALKLFDEMPER----DVPSW 195
G +A ++ +M E+ N+V+F A+I + + G A KL+D+M +R D+ ++
Sbjct: 309 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTY 368
Query: 196 NALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKW 255
N+L+ NGF C H L K
Sbjct: 369 NSLV-----NGF------------------------------------CMHDR-LDKAKQ 386
Query: 256 IHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGL----TSWNSMINCFA 311
+ ++ D F D N+L+ + K + ++F +GL ++ ++I
Sbjct: 387 MFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 446
Query: 312 LHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEP 371
G + A VF+QMV G V PD +T+ LL+ + G +E+ F+ M + I+
Sbjct: 447 HDGDCDNAQKVFKQMVSDG--VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE-IKL 503
Query: 372 QIEHYGCLVDLLGRAGRFDEAMEVVRGMSM---EPDEVVWGSLFNG 414
I Y +++ + +AG+ D+ ++ +S+ +P+ V + ++ +G
Sbjct: 504 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 549
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 6/143 (4%)
Query: 285 LALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLL 344
++L K+ + GL ++N +INCF Q A+A+ +M++ G P VT LL
Sbjct: 105 ISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLG--YEPSIVTLSSLL 162
Query: 345 NACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGM---SM 401
N HG + + + M E G P + L+ L + EA+ +V M
Sbjct: 163 NGYCHGKRISDAVALVDQMV-EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC 221
Query: 402 EPDEVVWGSLFNGCKVYGRTDLA 424
+P+ V +G + NG G TDLA
Sbjct: 222 QPNLVTYGVVVNGLCKRGDTDLA 244
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 149/338 (44%), Gaps = 39/338 (11%)
Query: 144 GGLGNAEKVFDEMRE----RNVVSFTAMISGYARVGDVDSALKLFDEMP-ERDVPS---W 195
G L +VFDEM R+V S+TA+I+ Y R G +++L+L D M E+ PS +
Sbjct: 155 GLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTY 214
Query: 196 NALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKW 255
N +I C + G EG ++ L AE + +P+ VT LSAC + +
Sbjct: 215 NTVINACARGGLDWEG------LLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEM 268
Query: 256 IHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVF-EMN-----PDKGLTSWNSMINC 309
+ + D + LV+ +GK L + EM PD +TS+N ++
Sbjct: 269 VFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPD--ITSYNVLLEA 326
Query: 310 FALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGI 369
+A G + A+ VF QM G P+ T+ LLN G + F M +
Sbjct: 327 YAKSGSIKEAMGVFHQMQAAG--CTPNANTYSVLLNLFGQSGRYDDVRQLFLEM-KSSNT 383
Query: 370 EPQIEHYGCLVDLLGRAGRFDEAMEVVRGM---SMEPDEVVWGSLFNGCKVYGRTDLAEF 426
+P Y L+++ G G F E + + M ++EPD + + C G+ L E
Sbjct: 384 DPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFAC---GKGGLHED 440
Query: 427 AAKKLL-----EIDPHNGGY-GIMLANVYGELGKWDEV 458
A K L +I P + Y G++ A +G+ ++E
Sbjct: 441 ARKILQYMTANDIVPSSKAYTGVIEA--FGQAALYEEA 476
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 144/340 (42%), Gaps = 62/340 (18%)
Query: 135 LVDSYSRGLGGLGNAEKVFDEMRER----NVVSFTAMISGYARVGDVDSALKLFDEMP-- 188
L+++Y++ G + A VF +M+ N +++ +++ + + G D +LF EM
Sbjct: 323 LLEAYAKS-GSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSS 381
Query: 189 --ERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGH 246
+ D ++N LI + G+F E + LF +MV E P+ T + ACG
Sbjct: 382 NTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIE-------PDMETYEGIIFACGK 434
Query: 247 TSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSM 306
+ + + I Y+ ND S +++ +G+
Sbjct: 435 GGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQA------------------------ 470
Query: 307 INCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTRE 366
AL+ E A+ F M E G + P TF LL + GGLV++ + + +
Sbjct: 471 ----ALY---EEALVAFNTMHEVGSN--PSIETFHSLLYSFARGGLVKESEAILSRLV-D 520
Query: 367 YGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSM---EPDEVVWGSLFNGCKVYGRTDL 423
GI + + ++ + G+F+EA++ M +PDE ++ + VY L
Sbjct: 521 SGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLS---VYSFARL 577
Query: 424 A-----EFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEV 458
+F K +I P Y +MLA VYG+ +WD+V
Sbjct: 578 VDECREQFEEMKASDILPSIMCYCMMLA-VYGKTERWDDV 616
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 122/275 (44%), Gaps = 20/275 (7%)
Query: 206 GFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDF 265
G + +RLF+ M +R C KPN +S G +L + +
Sbjct: 119 GDWQRSLRLFKYM-----QRQIWC-KPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGV 172
Query: 266 FVDSFISNSLVDMYGKCG----NLALARKVFEMNPDKGLTSWNSMINCFALHGQS-EGAI 320
F +L++ YG+ G +L L ++ + ++N++IN A G EG +
Sbjct: 173 SRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLL 232
Query: 321 AVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLV 380
+F +M G ++PD VT+ LL+AC GL ++ F M + GI P + Y LV
Sbjct: 233 GLFAEMRHEG--IQPDIVTYNTLLSACAIRGLGDEAEMVFRTMN-DGGIVPDLTTYSHLV 289
Query: 381 DLLGRAGRFDEAMEVVRGMSME---PDEVVWGSLFNGCKVYG--RTDLAEFAAKKLLEID 435
+ G+ R ++ +++ M+ PD + L G + + F +
Sbjct: 290 ETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCT 349
Query: 436 PHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKS 470
P+ Y ++L N++G+ G++D+VR ++ +K +
Sbjct: 350 PNANTYSVLL-NLFGQSGRYDDVRQLFLEMKSSNT 383
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 142/350 (40%), Gaps = 60/350 (17%)
Query: 94 RPNNFIYP---------HVLKSCHESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLG 144
+PN IY +L C E V ++ G + TAL+++Y R G
Sbjct: 138 KPNEHIYTIMISLLGREGLLDKCLE------VFDEMPSQGVSRSVFSYTALINAYGRN-G 190
Query: 145 GLGNAEKVFDEMRER----NVVSFTAMISGYARVG-DVDSALKLFDEMP----ERDVPSW 195
+ ++ D M+ +++++ +I+ AR G D + L LF EM + D+ ++
Sbjct: 191 RYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTY 250
Query: 196 NALIAGCTQNGFFSEGIRLFREM----------------------------VALAAERGY 227
N L++ C G E +FR M L E
Sbjct: 251 NTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMAS 310
Query: 228 RCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLAL 287
+ P+ + L A + ++ + + ++ + L++++G+ G
Sbjct: 311 GGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDD 370
Query: 288 ARKVF-EM---NPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGL 343
R++F EM N D ++N +I F G + + +F MVE ++ PD T+ G+
Sbjct: 371 VRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVE--ENIEPDMETYEGI 428
Query: 344 LNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAM 393
+ AC GGL E + MT I P + Y +++ G+A ++EA+
Sbjct: 429 IFACGKGGLHEDARKILQYMTAN-DIVPSSKAYTGVIEAFGQAALYEEAL 477
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 162/359 (45%), Gaps = 31/359 (8%)
Query: 129 PIVQTALVDSYSRGLGGLGNAEKVFDEMRE----RNVVSFTAMISGYARVGDVDSA--LK 182
P+ AL+ + +R + A + +MR+ + V+++ +I R +DS L+
Sbjct: 197 PLTYNALIGACARN-NDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLR 255
Query: 183 LFDEMP----ERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLV 238
L+ E+ E DV N +I G ++G S+ ++L + +A G V+++
Sbjct: 256 LYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQL----LGMAQATGLSAKTATLVSII 311
Query: 239 CALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDK 298
AL+ G T + + + ++ + N+L+ Y K G L A + +
Sbjct: 312 SALADSGRTLE---AEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKR 368
Query: 299 GLT----SWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVE 354
G++ +++ +I+ + G+ E A V ++M GDV+P+ F LL G +
Sbjct: 369 GVSPDEHTYSLLIDAYVNAGRWESARIVLKEME--AGDVQPNSFVFSRLLAGFRDRGEWQ 426
Query: 355 QGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGM---SMEPDEVVWGSL 411
+ + M + G++P + Y ++D G+ D AM M +EPD V W +L
Sbjct: 427 KTFQVLKEM-KSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTL 485
Query: 412 FNGCKVYGRTDLAE--FAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQ 468
+ +GR +AE F A + P Y IM+ N YG+ +WD+++ + +K Q
Sbjct: 486 IDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMI-NSYGDQERWDDMKRLLGKMKSQ 543
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 137/319 (42%), Gaps = 47/319 (14%)
Query: 131 VQTALVDSYSRGLGGLGNAEKVFDEMRERNVV----SFTAMISGYARVGDVDSALKLFDE 186
+ +AL DS G AE +F+E+R+ + ++ A++ GY + G + A + E
Sbjct: 310 IISALADS-----GRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSE 364
Query: 187 MPERDVP----SWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALS 242
M +R V +++ LI G + + +EM A P + V +
Sbjct: 365 MEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEA---------GDVQPNSFVFSRL 415
Query: 243 ACGHTSMLQLGKWIHGY-VYKNDFFV----DSFISNSLVDMYGKCGNLALARKVFE---- 293
G G+W + V K + D N ++D +GK L A F+
Sbjct: 416 LAGFRDR---GEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLS 472
Query: 294 --MNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGG 351
+ PD+ +WN++I+C HG+ A +FE M G P T+ ++N+
Sbjct: 473 EGIEPDR--VTWNTLIDCHCKHGRHIVAEEMFEAMERRG--CLPCATTYNIMINSYGDQE 528
Query: 352 LVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMS---MEPDEVVW 408
+ M + GI P + + LVD+ G++GRF++A+E + M ++P ++
Sbjct: 529 RWDDMKRLLGKM-KSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMY 587
Query: 409 GSLFNGCKVYGRTDLAEFA 427
+L N Y + L+E A
Sbjct: 588 NALINA---YAQRGLSEQA 603
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 157/346 (45%), Gaps = 38/346 (10%)
Query: 94 RPNNFIYPHVL----KSCHESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNA 149
+PN++IY ++ + C + + A +++++ G +V T L+D + + G + A
Sbjct: 313 KPNSYIYGSIIGLLCRICKLAEAEEA-FSEMIRQGILPDTVVYTTLIDGFCKR-GDIRAA 370
Query: 150 EKVFDEMRERN----VVSFTAMISGYARVGDVDSALKLFDEM----PERDVPSWNALIAG 201
K F EM R+ V+++TA+ISG+ ++GD+ A KLF EM E D ++ LI G
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 430
Query: 202 CTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSA-CGHTSMLQLGKWIHGYV 260
+ G + R+ M+ PN VT + C + + +H +
Sbjct: 431 YCKAGHMKDAFRVHNHMIQAGCS-------PNVVTYTTLIDGLCKEGDLDSANELLHE-M 482
Query: 261 YKNDFFVDSFISNSLVDMYGKCGNLALARKV---FE---MNPDKGLTSWNSMINCFALHG 314
+K + F NS+V+ K GN+ A K+ FE +N D ++ ++++ + G
Sbjct: 483 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT--VTYTTLMDAYCKSG 540
Query: 315 QSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIE 374
+ + A + ++M+ G ++P VTF L+N G++E G M + GI P
Sbjct: 541 EMDKAQEILKEML--GKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK-GIAPNAT 597
Query: 375 HYGCLVDLLGRAGRFDEAMEVVRGM---SMEPDEVVWGSLFNG-CK 416
+ LV A + + M + PD + +L G CK
Sbjct: 598 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCK 643
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 121/298 (40%), Gaps = 66/298 (22%)
Query: 146 LGNAEKVFDEMRERNV----VSFTAMISGYARVGDVDSALKLFDEMPERDVP----SWNA 197
L AE+ F EM + + V +T +I G+ + GD+ +A K F EM RD+ ++ A
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 391
Query: 198 LIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIH 257
+I+G Q G E +LF EM E P+ VT
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLE-------PDSVTF-------------------- 424
Query: 258 GYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKG----LTSWNSMINCFALH 313
L++ Y K G++ A +V G + ++ ++I+
Sbjct: 425 ---------------TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469
Query: 314 GQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSY---FEMMTREYGIE 370
G + A + +M + G ++P+ T+ ++N G +E+ FE G+
Sbjct: 470 GDLDSANELLHEMWKIG--LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA----GLN 523
Query: 371 PQIEHYGCLVDLLGRAGRFDEAMEVVR---GMSMEPDEVVWGSLFNGCKVYGRTDLAE 425
Y L+D ++G D+A E+++ G ++P V + L NG ++G + E
Sbjct: 524 ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 581
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/370 (20%), Positives = 154/370 (41%), Gaps = 30/370 (8%)
Query: 80 LFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTGAVHAQIVKTGFEQYPIVQTALVDSY 139
+F +ML + N + K C+++ + V + + G + + +V +
Sbjct: 197 VFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGV-CWNVASYNIVIHF 255
Query: 140 SRGLGGLGNAEKVFDEMRER----NVVSFTAMISGYARVGDVDSALKLFDEMPERDVPS- 194
LG + A + M + +V+S++ +++GY R G++D KL + M + +
Sbjct: 256 VCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPN 315
Query: 195 ---WNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSA-CGHTSML 250
+ ++I + +E F EM+ P+ V + C +
Sbjct: 316 SYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI-------LPDTVVYTTLIDGFCKRGDIR 368
Query: 251 QLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGL----TSWNSM 306
K+ + ++ D D +++ + + G++ A K+F KGL ++ +
Sbjct: 369 AASKFFYE-MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 307 INCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNA-CTHGGLVEQGCSYFEMMTR 365
IN + G + A V M++ G P+ VT+ L++ C G L EM
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAG--CSPNVVTYTTLIDGLCKEGDLDSANELLHEMW-- 483
Query: 366 EYGIEPQIEHYGCLVDLLGRAGRFDEAMEVV---RGMSMEPDEVVWGSLFNGCKVYGRTD 422
+ G++P I Y +V+ L ++G +EA+++V + D V + +L + G D
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 543
Query: 423 LAEFAAKKLL 432
A+ K++L
Sbjct: 544 KAQEILKEML 553
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 157/346 (45%), Gaps = 38/346 (10%)
Query: 94 RPNNFIYPHVL----KSCHESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNA 149
+PN++IY ++ + C + + A +++++ G +V T L+D + + G + A
Sbjct: 313 KPNSYIYGSIIGLLCRICKLAEAEEA-FSEMIRQGILPDTVVYTTLIDGFCKR-GDIRAA 370
Query: 150 EKVFDEMRERN----VVSFTAMISGYARVGDVDSALKLFDEM----PERDVPSWNALIAG 201
K F EM R+ V+++TA+ISG+ ++GD+ A KLF EM E D ++ LI G
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 430
Query: 202 CTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSA-CGHTSMLQLGKWIHGYV 260
+ G + R+ M+ PN VT + C + + +H +
Sbjct: 431 YCKAGHMKDAFRVHNHMIQAGCS-------PNVVTYTTLIDGLCKEGDLDSANELLHE-M 482
Query: 261 YKNDFFVDSFISNSLVDMYGKCGNLALARKV---FE---MNPDKGLTSWNSMINCFALHG 314
+K + F NS+V+ K GN+ A K+ FE +N D ++ ++++ + G
Sbjct: 483 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT--VTYTTLMDAYCKSG 540
Query: 315 QSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIE 374
+ + A + ++M+ G ++P VTF L+N G++E G M + GI P
Sbjct: 541 EMDKAQEILKEML--GKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK-GIAPNAT 597
Query: 375 HYGCLVDLLGRAGRFDEAMEVVRGM---SMEPDEVVWGSLFNG-CK 416
+ LV A + + M + PD + +L G CK
Sbjct: 598 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCK 643
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 121/298 (40%), Gaps = 66/298 (22%)
Query: 146 LGNAEKVFDEMRERNV----VSFTAMISGYARVGDVDSALKLFDEMPERDVP----SWNA 197
L AE+ F EM + + V +T +I G+ + GD+ +A K F EM RD+ ++ A
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 391
Query: 198 LIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIH 257
+I+G Q G E +LF EM E P+ VT
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLE-------PDSVTF-------------------- 424
Query: 258 GYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKG----LTSWNSMINCFALH 313
L++ Y K G++ A +V G + ++ ++I+
Sbjct: 425 ---------------TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469
Query: 314 GQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSY---FEMMTREYGIE 370
G + A + +M + G ++P+ T+ ++N G +E+ FE G+
Sbjct: 470 GDLDSANELLHEMWKIG--LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA----GLN 523
Query: 371 PQIEHYGCLVDLLGRAGRFDEAMEVVR---GMSMEPDEVVWGSLFNGCKVYGRTDLAE 425
Y L+D ++G D+A E+++ G ++P V + L NG ++G + E
Sbjct: 524 ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 581
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/370 (20%), Positives = 154/370 (41%), Gaps = 30/370 (8%)
Query: 80 LFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTGAVHAQIVKTGFEQYPIVQTALVDSY 139
+F +ML + N + K C+++ + V + + G + + +V +
Sbjct: 197 VFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGV-CWNVASYNIVIHF 255
Query: 140 SRGLGGLGNAEKVFDEMRER----NVVSFTAMISGYARVGDVDSALKLFDEMPERDVPS- 194
LG + A + M + +V+S++ +++GY R G++D KL + M + +
Sbjct: 256 VCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPN 315
Query: 195 ---WNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSA-CGHTSML 250
+ ++I + +E F EM+ P+ V + C +
Sbjct: 316 SYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI-------LPDTVVYTTLIDGFCKRGDIR 368
Query: 251 QLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGL----TSWNSM 306
K+ + ++ D D +++ + + G++ A K+F KGL ++ +
Sbjct: 369 AASKFFYE-MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 307 INCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNA-CTHGGLVEQGCSYFEMMTR 365
IN + G + A V M++ G P+ VT+ L++ C G L EM
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAG--CSPNVVTYTTLIDGLCKEGDLDSANELLHEMW-- 483
Query: 366 EYGIEPQIEHYGCLVDLLGRAGRFDEAMEVV---RGMSMEPDEVVWGSLFNGCKVYGRTD 422
+ G++P I Y +V+ L ++G +EA+++V + D V + +L + G D
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 543
Query: 423 LAEFAAKKLL 432
A+ K++L
Sbjct: 544 KAQEILKEML 553
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 114/506 (22%), Positives = 205/506 (40%), Gaps = 81/506 (16%)
Query: 8 QVLTILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHL-- 65
++L+ + K N + + L + LG H + Y + ++ C S LP A + +
Sbjct: 86 KLLSAIAKMNKFDVVISLGEQMQNLGIPH-NHYTYSILINCFCRRSQLPLALAVLGKMMK 144
Query: 66 --HSPNIYLYTS------------STFSLFRRMLCNS-NPTTTRPNNFIY---------- 100
+ PNI +S +L +M P T N I+
Sbjct: 145 LGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASE 204
Query: 101 ------PHVLKSCHESRST-GAVHAQIVKTG-----------FEQYPIVQTALVDSYSRG 142
V K C T G V + K G EQ + L+ Y+
Sbjct: 205 AMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLI--YNTI 262
Query: 143 LGGL------GNAEKVFDEMRER----NVVSFTAMISGYARVGDVDSALKLFDEMPER-- 190
+ GL +A +F EM + NVV+++++IS G A +L +M ER
Sbjct: 263 IDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 322
Query: 191 --DVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTS 248
DV +++ALI + G E +L+ EMV R P+ VT ++
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK-------RSIDPSIVTYSSLINGFCMHD 375
Query: 249 MLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLT----SWN 304
L K + ++ F D N+L+ + K + +VF +GL ++N
Sbjct: 376 RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYN 435
Query: 305 SMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMT 364
+I G + A +F++MV G V P+ +T+ LL+ G +E+ FE +
Sbjct: 436 ILIQGLFQAGDCDMAQEIFKEMVSDG--VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 493
Query: 365 REYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSM---EPDEVVWGSLFNGCKVYGRT 421
R +EP I Y +++ + +AG+ ++ ++ +S+ +PD V + ++ +G G
Sbjct: 494 RS-KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 552
Query: 422 DLAEFAAKKLLE--IDPHNGGYGIML 445
+ A+ K++ E P++G Y ++
Sbjct: 553 EEADALFKEMKEDGTLPNSGCYNTLI 578
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 154/372 (41%), Gaps = 66/372 (17%)
Query: 71 YLYTSSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKS-CHESRSTGA--VHAQIVKTGFEQ 127
Y + +LF+ M RPN Y ++ C+ R + A + + +++
Sbjct: 269 YKHMDDALNLFKEM----ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINP 324
Query: 128 YPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNV----VSFTAMISGYARVGDVDSALKL 183
+AL+D++ + G L AEK++DEM +R++ V+++++I+G+ +D A ++
Sbjct: 325 DVFTFSALIDAFVKE-GKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383
Query: 184 FDEMPER----DVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVC 239
F+ M + DV ++N LI G + EG+ +FREM ++RG N L+
Sbjct: 384 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM----SQRGLVGNTVTYNILIQ 439
Query: 240 ALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFE------ 293
L G M Q I + + + N+L+D K G L A VFE
Sbjct: 440 GLFQAGDCDMAQ---EIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496
Query: 294 MNPD-----------------------------KGL----TSWNSMINCFALHGQSEGAI 320
M P KG+ ++N+MI+ F G E A
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 556
Query: 321 AVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLV 380
A+F++M E G P+ + L+ A G E + M R G G +
Sbjct: 557 ALFKEMKEDG--TLPNSGCYNTLIRARLRDGDREASAELIKEM-RSCGFAGDASTIGLVT 613
Query: 381 DLLGRAGRFDEA 392
++L GR D++
Sbjct: 614 NML-HDGRLDKS 624
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 165/413 (39%), Gaps = 76/413 (18%)
Query: 107 CHESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRG---LGGLGNAEKVFDEMRERNVVS 163
C RS A++ ++K G+ ++ LVD S+ L + + K+ + NVV
Sbjct: 439 CGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVV 498
Query: 164 FTAMISGYARVGDVDSALKLFDEM----PERDVPSWNALIAGCTQNGFFSEGIRLFREMV 219
F ++I G+ R+ D ALK+F M + DV ++ ++ G E + LF M
Sbjct: 499 FNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMF 558
Query: 220 ALAAERGYRCNKPNPVTLVCALSA-CGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDM 278
+ E P+ + + A C H +G + + +N D + N ++ +
Sbjct: 559 KMGLE-------PDALAYCTLIDAFCKHMKP-TIGLQLFDLMQRNKISADIAVCNVVIHL 610
Query: 279 YGKCGNLALARKVF------EMNPDKGLTSWNSMI------------------------- 307
KC + A K F +M PD + ++N+MI
Sbjct: 611 LFKCHRIEDASKFFNNLIEGKMEPD--IVTYNTMICGYCSLRRLDEAERIFELLKVTPFG 668
Query: 308 -NCFAL---------HGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGC 357
N L + +GAI +F M E G +P+ VT+ L++ + +E
Sbjct: 669 PNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGS--KPNAVTYGCLMDWFSKSVDIEGSF 726
Query: 358 SYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVR---GMSMEPDEVVWGSLFNG 414
FE M +E GI P I Y ++D L + GR DEA + + PD V + L G
Sbjct: 727 KLFEEM-QEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRG 785
Query: 415 -CKVYGRTDLAEFAAKKLLE--IDPHNGGYGIMLANVYGELG--KWDEVRNVW 462
CKV GR A + +L + P + +L E KW + VW
Sbjct: 786 YCKV-GRLVEAALLYEHMLRNGVKPDD-----LLQRALSEYNPPKWLMSKGVW 832
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 123/297 (41%), Gaps = 43/297 (14%)
Query: 160 NVVSFTAMISGYARVGDVDSALKLFDEMPER----DVPSWNALIAGCTQNGFFSEGIRLF 215
NVV+F +I+G+ + G++D A LF M +R D+ +++ LI G + G G +LF
Sbjct: 285 NVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLF 344
Query: 216 REMV--------------------------ALAAERGYRCN--KPNPVTLVCALSACGHT 247
+ + A + C PN VT +
Sbjct: 345 SQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQD 404
Query: 248 SMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNL----ALARKVFEMNPDKGLTSW 303
+ ++G + K +SL+D + KCGNL AL + +M + +
Sbjct: 405 GRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIY 464
Query: 304 NSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMM 363
+++ + G A+ +M+ G +R + V F L++ ++ F +M
Sbjct: 465 GVLVDGLSKQGLMLHAMRFSVKML--GQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Query: 364 TREYGIEPQIEHYGCLVDLLGRAGRFDEAMEV---VRGMSMEPDEVVWGSLFNG-CK 416
YGI+P + + ++ + GR +EA+ + + M +EPD + + +L + CK
Sbjct: 523 G-IYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCK 578
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 138/294 (46%), Gaps = 25/294 (8%)
Query: 119 QIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERN----VVSFTAMISGYARV 174
++V+ GF+ + +++ + G A +F +M ERN VV ++ +I +
Sbjct: 200 RMVEYGFQPDEVTYGPVLNRLCKS-GNSALALDLFRKMEERNIKASVVQYSIVIDSLCKD 258
Query: 175 GDVDSALKLFDEMPER----DVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCN 230
G D AL LF+EM + DV ++++LI G +G + +G ++ REM+ R
Sbjct: 259 GSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG-------RNI 311
Query: 231 KPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARK 290
P+ VT + L K ++ + D+ NSL+D + K L A +
Sbjct: 312 IPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQ 371
Query: 291 VFEMNPDKG----LTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGL-LN 345
+F++ KG + +++ +IN + + + + +F ++ G + P+ +T+ L L
Sbjct: 372 MFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG--LIPNTITYNTLVLG 429
Query: 346 ACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGM 399
C G L + EM++R G+ P + YG L+D L G ++A+E+ M
Sbjct: 430 FCQSGKLNAAKELFQEMVSR--GVPPSVVTYGILLDGLCDNGELNKALEIFEKM 481
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 178/410 (43%), Gaps = 50/410 (12%)
Query: 122 KTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFD---EMRER-NVVSFTAMISGYARVGDV 177
K G+E I + LV+ + G + A + D EM++R ++V+ + +I+G G V
Sbjct: 133 KLGYEPDTITFSTLVNGFCLE-GRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRV 191
Query: 178 DSALKLFDEMPER----DVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPN 233
AL L D M E D ++ ++ ++G + + LFR+M ER + +
Sbjct: 192 SEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM----EERNIKASVVQ 247
Query: 234 PVTLVCALSACGH-TSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLA-LARKV 291
++ +L G L L + K D S + L + GK + A + R++
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN-DGKWDDGAKMLREM 306
Query: 292 FEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGG 351
N + +++++I+ F G+ A ++ +M+ G + PD +T+ L++
Sbjct: 307 IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG--IAPDTITYNSLIDGFCKEN 364
Query: 352 LVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSME---PDEVVW 408
+ + F++M + G EP I Y L++ +A R D+ M + R +S + P+ + +
Sbjct: 365 CLHEANQMFDLMVSK-GCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITY 423
Query: 409 GSLFNGCKVYGRTDLAEFAAKKLLE------IDPHNGGYGIMLANV--YGELGKWDEVRN 460
+L G G+ + AAK+L + + P YGI+L + GEL K E+
Sbjct: 424 NTLVLGFCQSGKLN----AAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFE 479
Query: 461 VWRILKQQKSYKVPG-----------CSWIEIDDQVHQFFSLDQSSPKAE 499
K QKS G C+ ++DD F SL K +
Sbjct: 480 -----KMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPD 524
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 139/315 (44%), Gaps = 24/315 (7%)
Query: 161 VVSFTAMISGYARVGDVDSALKLFDEMPER----DVPSWNALIAGCTQNGFFSEGIRLFR 216
V + AM+ Y+R G A +L D M +R D+ S+N LI ++G + + +
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAV-- 282
Query: 217 EMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLV 276
E++ + G R P+ +T LSAC S L + + + D + N+++
Sbjct: 283 ELLDMVRNSGLR---PDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMI 339
Query: 277 DMYGKCGNLALARKVFEMNPDKGL----TSWNSMINCFALHGQSEGAIAVFEQMVECGGD 332
+YG+CG A A ++F KG ++NS++ FA +E V++QM + G
Sbjct: 340 SVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMG-- 397
Query: 333 VRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEA 392
D +T+ +++ G ++ ++ M G P Y L+D LG+A R EA
Sbjct: 398 FGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEA 457
Query: 393 MEVVRGM---SMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLE--IDPHNGGYGIMLAN 447
++ M ++P + +L G G+ + AE +L P N Y +ML
Sbjct: 458 AALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVML-- 515
Query: 448 VYGELGKWDEVRNVW 462
L + +E R W
Sbjct: 516 --DVLLRGNETRKAW 528
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 116/291 (39%), Gaps = 55/291 (18%)
Query: 120 IVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMR----ERNVVSFTAMISGYARVG 175
+ +G I L+ + SR L A KVF++M + ++ ++ AMIS Y R G
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRD-SNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCG 346
Query: 176 DVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPV 235
A +LF E+ + GFF + + + A A ER
Sbjct: 347 LAAEAERLFMELELK---------------GFFPDAVTYNSLLYAFARERN--------- 382
Query: 236 TLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFE-- 293
+ K ++ + K F D N+++ MYGK G L LA ++++
Sbjct: 383 --------------TEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDM 428
Query: 294 -----MNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACT 348
NPD ++ +I+ ++ A A+ +M++ G ++P T+ L+
Sbjct: 429 KGLSGRNPDA--ITYTVLIDSLGKANRTVEAAALMSEMLDVG--IKPTLQTYSALICGYA 484
Query: 349 HGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGM 399
G E+ F M R G +P Y ++D+L R +A + R M
Sbjct: 485 KAGKREEAEDTFSCMLRS-GTKPDNLAYSVMLDVLLRGNETRKAWGLYRDM 534
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 94/208 (45%), Gaps = 17/208 (8%)
Query: 271 ISNSLVDMYGKCGNLALARKVFEMNPDKG----LTSWNSMINCFALHGQSEGAIAV-FEQ 325
+ N+++ +Y + G + A+++ + +G L S+N++IN G +AV
Sbjct: 227 VYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLD 286
Query: 326 MVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGR 385
MV G +RPD +T+ LL+AC+ ++ FE M + +P + Y ++ + GR
Sbjct: 287 MVRNSG-LRPDAITYNTLLSACSRDSNLDGAVKVFEDM-EAHRCQPDLWTYNAMISVYGR 344
Query: 386 AGRFDEAMEVVRGMSME---PDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYG 442
G EA + + ++ PD V + SL + R E + ++ G
Sbjct: 345 CGLAAEAERLFMELELKGFFPDAVTYNSLLYA---FARERNTEKVKEVYQQMQKMGFGKD 401
Query: 443 IMLAN----VYGELGKWDEVRNVWRILK 466
M N +YG+ G+ D +++ +K
Sbjct: 402 EMTYNTIIHMYGKQGQLDLALQLYKDMK 429
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 107/450 (23%), Positives = 184/450 (40%), Gaps = 91/450 (20%)
Query: 80 LFRRMLCNSNPTTTRPNNFIYPHVLKS-CHESRSTGA--VHAQIVKTGFEQYPIVQTALV 136
+++RMLC PN Y ++K C + R A ++ QI+K G E + ++L+
Sbjct: 378 VYKRMLCQG----ISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLI 433
Query: 137 DSYSRGLGGLGNAEKVFDEMRER----NVVSFTAMISGYARVGDVDSAL----KLFDEMP 188
D + + G L + ++++M + +VV + ++ G ++ G + A+ K+ +
Sbjct: 434 DGFCK-CGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSI 492
Query: 189 ERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSA----- 243
+V +N+LI G + F E +++FR M G KP+ T +
Sbjct: 493 RLNVVVFNSLIDGWCRLNRFDEALKVFRLM-------GIYGIKPDVATFTTVMRVSIMED 545
Query: 244 --CGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVF------EMN 295
C H +G + + +N D + N ++ + KC + A K F +M
Sbjct: 546 AFCKHMKP-TIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKME 604
Query: 296 PDKGLTSWNSMI--------------------------NCFAL---------HGQSEGAI 320
PD + ++N+MI N L + +GAI
Sbjct: 605 PD--IVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAI 662
Query: 321 AVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLV 380
+F M E G +P+ VT+ L++ + +E FE M +E GI P I Y ++
Sbjct: 663 RMFSIMAEKGS--KPNAVTYGCLMDWFSKSVDIEGSFKLFEEM-QEKGISPSIVSYSIII 719
Query: 381 DLLGRAGRFDEAMEVVR---GMSMEPDEVVWGSLFNG-CKVYGRTDLAEFAAKKLLE--I 434
D L + GR DEA + + PD V + L G CKV GR A + +L +
Sbjct: 720 DGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKV-GRLVEAALLYEHMLRNGV 778
Query: 435 DPHNGGYGIMLANVYGELG--KWDEVRNVW 462
P + +L E KW + VW
Sbjct: 779 KPDD-----LLQRALSEYNPPKWLMSKGVW 803
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 120/276 (43%), Gaps = 56/276 (20%)
Query: 160 NVVSFTAMISGYARVGDVDSALKLFDEMPER----DVPSWNALIAGCTQNGFFSEGIRLF 215
NVV+F +I+G+ + G++D A LF M +R D+ +++ LI G + G G +LF
Sbjct: 285 NVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLF 344
Query: 216 REMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSL 275
+ A +G + +D + +S
Sbjct: 345 SQ----ALHKGVK--------------------------------------LDVVVFSST 362
Query: 276 VDMYGKCGNLALARKVFEMNPDKGLT----SWNSMINCFALHGQSEGAIAVFEQMVECGG 331
+D+Y K G+LA A V++ +G++ ++ +I G+ A ++ Q+++ G
Sbjct: 363 IDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRG- 421
Query: 332 DVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDE 391
+ P VT+ L++ G + G + +E M + G P + YG LVD L + G
Sbjct: 422 -MEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK-MGYPPDVVIYGVLVDGLSKQGLMLH 479
Query: 392 AMEV---VRGMSMEPDEVVWGSLFNGCKVYGRTDLA 424
AM + G S+ + VV+ SL +G R D A
Sbjct: 480 AMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 167/404 (41%), Gaps = 81/404 (20%)
Query: 107 CHESRSTGAVHA--QIVKTGFEQYPIVQTALVDSYSRGL---GGLGNAEKVFDEMRER-- 159
CH R + AV Q+V+ G+ I T L+ GL A + D M +R
Sbjct: 91 CHGKRISDAVALVDQMVEMGYRPDTITFTTLI----HGLFLHNKASEAVALVDRMVQRGC 146
Query: 160 --NVVSFTAMISGYARVGDVDSALKLFDEMP----ERDVPSWNALIAGCTQNGFFSEGIR 213
N+V++ +++G + GD+D A L ++M E DV +N +I + + +
Sbjct: 147 QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 206
Query: 214 LFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSF--- 270
LF+EM +G R PN VT +L +C + G+W +D
Sbjct: 207 LFKEM----ETKGIR---PNVVT-YSSLISC----LCSYGRWSDASQLLSDMIEKKINPN 254
Query: 271 --ISNSLVDMYGKCGNLALARKVFE------MNPDKGLTSWNSMINCFALHGQSEGAIAV 322
N+L+D + K G A K+ + ++PD + ++NS+IN F +H + + A +
Sbjct: 255 LVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPD--IFTYNSLINGFCMHDRLDKAKQM 312
Query: 323 FEQMV--ECGGDVRP-------------------------------DGVTFVGLLNACTH 349
FE MV +C D+ D VT+ L+ H
Sbjct: 313 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 372
Query: 350 GGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMS---MEPDEV 406
G + F+ M + G+ P I Y L+D L G+ ++A+EV M ++ D
Sbjct: 373 DGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 431
Query: 407 VWGSLFNGCKVYGRTDLA--EFAAKKLLEIDPHNGGYGIMLANV 448
++ ++ G G+ D F + L + P+ Y M++ +
Sbjct: 432 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 475
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 141/332 (42%), Gaps = 31/332 (9%)
Query: 158 ERNVVSFTAMISGYARVGDVDSALKLFDEMPER----DVPSWNALIAGCTQNGFFSEGIR 213
E ++V+ +++++GY + A+ L D+M E D ++ LI G + SE +
Sbjct: 77 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 136
Query: 214 LFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISN 273
L MV +RG C +PN VT ++ + L + + D I N
Sbjct: 137 LVDRMV----QRG--C-QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFN 189
Query: 274 SLVDMYGKCGNLALARKVFEMNPDKGL----TSWNSMINCFALHGQSEGAIAVFEQMVEC 329
+++D K ++ A +F+ KG+ +++S+I+C +G+ A + M+E
Sbjct: 190 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE- 248
Query: 330 GGDVRPDGVTFVGLLNA-CTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGR 388
+ P+ VTF L++A G VE + +M+ R I+P I Y L++ R
Sbjct: 249 -KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR--SIDPDIFTYNSLINGFCMHDR 305
Query: 389 FDEAMEVVRGMSME---PDEVVWGSLFNG-CKVYGRTDLAEFAAKKLLEIDPHNG--GYG 442
D+A ++ M + PD + +L G CK D E L H G G
Sbjct: 306 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTE-----LFREMSHRGLVGDT 360
Query: 443 IMLANVYGELGKWDEVRNVWRILKQQKSYKVP 474
+ + L + N ++ KQ S VP
Sbjct: 361 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 392
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 6/143 (4%)
Query: 285 LALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLL 344
++L K+ + L ++N +INCF Q A+A+ +M++ G P VT LL
Sbjct: 30 ISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLG--YEPSIVTLSSLL 87
Query: 345 NACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSM--- 401
N HG + + + M E G P + L+ L + EA+ +V M
Sbjct: 88 NGYCHGKRISDAVALVDQMV-EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC 146
Query: 402 EPDEVVWGSLFNGCKVYGRTDLA 424
+P+ V +G + NG G DLA
Sbjct: 147 QPNLVTYGVVVNGLCKRGDIDLA 169
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 156/383 (40%), Gaps = 61/383 (15%)
Query: 134 ALVDSYSRGLGGLGNAEKVFDEMRERNVV----SFTAMISGYA---RVGDVDSALKLFDE 186
++D+Y + G + A + F M E +V +F MI Y ++G+V S +K
Sbjct: 303 TMIDTYGKS-GQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKL 361
Query: 187 MPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGH 246
D ++N LI+ T+N F+EM + G KP+PV+ L A
Sbjct: 362 HCAPDTRTYNILISLHTKNNDIERAGAYFKEM----KDDGL---KPDPVSYRTLLYAFSI 414
Query: 247 TSMLQLGKWIHGYVYKNDFFVDSFISNSL------------------------------- 275
M++ + + + ++ +D + ++L
Sbjct: 415 RHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGY 474
Query: 276 ---VDMYGKCGNLALARKVF----EMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVE 328
+D YG+ G L+ A +VF E+N + + +N MI + + E A +FE M+
Sbjct: 475 SANIDAYGERGYLSEAERVFICCQEVNK-RTVIEYNVMIKAYGISKSCEKACELFESMMS 533
Query: 329 CGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGR 388
G V PD T+ L+ + +G Y E M RE G Y ++ + G+
Sbjct: 534 YG--VTPDKCTYNTLVQILASADMPHKGRCYLEKM-RETGYVSDCIPYCAVISSFVKLGQ 590
Query: 389 FDEAMEVVRGM---SMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEID-PHNGGYGIM 444
+ A EV + M ++EPD VV+G L N G A + + E P N
Sbjct: 591 LNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNS 650
Query: 445 LANVYGELGKWDEVRNVWRILKQ 467
L +Y ++G DE ++R L Q
Sbjct: 651 LIKLYTKVGYLDEAEAIYRKLLQ 673
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 133/282 (47%), Gaps = 29/282 (10%)
Query: 119 QIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERN----VVSFTAMISGYARV 174
++ +TG+ I A++ S+ + LG L AE+V+ EM E N VV + +I+ +A
Sbjct: 565 KMRETGYVSDCIPYCAVISSFVK-LGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADT 623
Query: 175 GDVDSALKLFDEMPERDVPS----WNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCN 230
G+V A+ + M E +P +N+LI T+ G+ E ++R+++ CN
Sbjct: 624 GNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQ-------SCN 676
Query: 231 K---PNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNL-- 285
K P+ T C ++ SM++ + I + K + F ++ MY K G
Sbjct: 677 KTQYPDVYTSNCMINLYSERSMVRKAEAIFDSM-KQRGEANEFTFAMMLCMYKKNGRFEE 735
Query: 286 --ALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGL 343
+A+++ EM S+NS++ FAL G+ + A+ F++MV G ++PD TF L
Sbjct: 736 ATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSG--IQPDDSTFKSL 793
Query: 344 LNACTHGGLVEQGCSYFEMMTR---EYGIEPQIEHYGCLVDL 382
G+ ++ E + + + G+E I LV +
Sbjct: 794 GTILMKLGMSKKAVRKIEEIRKKEIKRGLELWISTLSSLVGI 835
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 95/416 (22%), Positives = 161/416 (38%), Gaps = 37/416 (8%)
Query: 79 SLFRRMLCNSNPTTTRPNNFIYPHVLKSCHESRSTGAVHAQIVKTGFEQYPIVQTALVDS 138
SL + M + P T N I H ++ GA ++ G + P+ L+ +
Sbjct: 354 SLMKTMKLHCAPDTRTYNILISLHTKN--NDIERAGAYFKEMKDDGLKPDPVSYRTLLYA 411
Query: 139 YS-RGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNA 197
+S R + + AE + EM + NV S R + + EM E+ SW+
Sbjct: 412 FSIRHM--VEEAEGLIAEMDDDNVEIDEYTQSALTR-------MYVEAEMLEK---SWSW 459
Query: 198 L----IAGCTQNGFFSEGIRLFREMVALA-AERGYRC----NKPNPVTLVCALSACGHTS 248
+AG + +S I + E L+ AER + C NK + + A G +
Sbjct: 460 FKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISK 519
Query: 249 MLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTS----WN 304
+ + + D N+LV + R E + G S +
Sbjct: 520 SCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYC 579
Query: 305 SMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMT 364
++I+ F GQ A V+++MVE ++ PD V + L+NA G V+Q SY E M
Sbjct: 580 AVISSFVKLGQLNMAEEVYKEMVEY--NIEPDVVVYGVLINAFADTGNVQQAMSYVEAM- 636
Query: 365 REYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGM------SMEPDEVVWGSLFNGCKVY 418
+E GI Y L+ L + G DEA + R + + PD + N
Sbjct: 637 KEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSER 696
Query: 419 GRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVP 474
AE + + N M+ +Y + G+++E + + +++ K P
Sbjct: 697 SMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDP 752
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 143/311 (45%), Gaps = 19/311 (6%)
Query: 118 AQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDV 177
+++VK G + L+D + + +G A+ + DE+ E N+++ T ++S Y + +
Sbjct: 185 SEMVKMGILPDTVSYNTLIDGFCK-VGNFVRAKALVDEISELNLITHTILLSSYYNLHAI 243
Query: 178 DSALK-LFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVT 236
+ A + + + DV +++++I + G EG L REM ++ PN VT
Sbjct: 244 EEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSV-------YPNHVT 296
Query: 237 LVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEM-- 294
+ + ++ + ++ + VD + L+D K G+L A K F+M
Sbjct: 297 YTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLL 356
Query: 295 --NPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGL 352
N + ++ ++++ G A + QM+E V P+ VT+ ++N G+
Sbjct: 357 EDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLE--KSVIPNVVTYSSMINGYVKKGM 414
Query: 353 VEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSM---EPDEVVWG 409
+E+ S M + + P YG ++D L +AG+ + A+E+ + M + E + +
Sbjct: 415 LEEAVSLLRKM-EDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILD 473
Query: 410 SLFNGCKVYGR 420
+L N K GR
Sbjct: 474 ALVNHLKRIGR 484
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 96/409 (23%), Positives = 178/409 (43%), Gaps = 67/409 (16%)
Query: 95 PNNFIYPHVLKSCHES---RSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEK 151
PN+ Y ++ S ++ R A+++Q+V G +V T L+D + G L AEK
Sbjct: 292 PNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKA-GDLREAEK 350
Query: 152 VFDEMRERN----VVSFTAMISGYARVGDVDSALKLFDEMPER----DVPSWNALIAGCT 203
F + E N VV++TA++ G + GD+ SA + +M E+ +V +++++I G
Sbjct: 351 TFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYV 410
Query: 204 QNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSM-LQLGKWIHGY-VY 261
+ G E + L R+M ++ N T++ L G M ++L K + V
Sbjct: 411 KKGMLEEAVSLLRKM----EDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVE 466
Query: 262 KNDFFVDSFISN------------------------------SLVDMYGKCGNLALARKV 291
+N++ +D+ +++ SL+D++ K G+ A
Sbjct: 467 ENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAW 526
Query: 292 FEMNPDKGL----TSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNAC 347
E ++G+ S+N +I+ G+ GA ++ M E G + PD TF ++N+
Sbjct: 527 AEEMQERGMPWDVVSYNVLISGMLKFGKV-GADWAYKGMREKG--IEPDIATFNIMMNSQ 583
Query: 348 THGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRG---MSMEPD 404
G E ++ M + GI+P + +V +L G+ +EA+ ++ M + P+
Sbjct: 584 RKQGDSEGILKLWDKM-KSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPN 642
Query: 405 EVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLA-NVYGEL 452
+ + + R D + LL YGI L+ VY L
Sbjct: 643 LTTYRIFLDTSSKHKRADAIFKTHETLL-------SYGIKLSRQVYNTL 684
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 109/281 (38%), Gaps = 58/281 (20%)
Query: 160 NVVSFTAMISGYARVGDVDSALKLF-DEMPERDVPSWNALIAGCTQNGFFSEGIRLFREM 218
+V + +I + +VG + A+ L + + D ++N +I+G ++G E + EM
Sbjct: 128 DVFALNVLIHSFCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEM 187
Query: 219 VALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDM 278
V + D+ N+L+D
Sbjct: 188 VKMG------------------------------------------ILPDTVSYNTLIDG 205
Query: 279 YGKCGNLALARKVFEMNPDKGLTSWNSMINC-FALHGQSEGAIAVFEQMVECGGDVRPDG 337
+ K GN A+ + + + L + +++ + LH E + MV G D PD
Sbjct: 206 FCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEA----YRDMVMSGFD--PDV 259
Query: 338 VTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAME--- 394
VTF ++N GG V +G M E + P Y LVD L +A + A+
Sbjct: 260 VTFSSIINRLCKGGKVLEGGLLLREM-EEMSVYPNHVTYTTLVDSLFKANIYRHALALYS 318
Query: 395 --VVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLE 433
VVRG+ + D VV+ L +G G AE K LLE
Sbjct: 319 QMVVRGIPV--DLVVYTVLMDGLFKAGDLREAEKTFKMLLE 357
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 167/397 (42%), Gaps = 51/397 (12%)
Query: 96 NNFIYPHV---LKSCHESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKV 152
NN+I + LK + + +V G I T+L+D + +G G A
Sbjct: 468 NNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKG-GDEEAALAW 526
Query: 153 FDEMRER----NVVSFTAMISGYARVGDV--DSALK-LFDEMPERDVPSWNALIAGCTQN 205
+EM+ER +VVS+ +ISG + G V D A K + ++ E D+ ++N ++ +
Sbjct: 527 AEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQ 586
Query: 206 GFFSEGI-RLFREMVALAAERGY-RCNKPNPVTLVC---ALSACGHTSMLQLGKWIHGYV 260
G SEGI +L+ +M + + CN V ++C + H + IH +
Sbjct: 587 GD-SEGILKLWDKMKSCGIKPSLMSCNIV--VGMLCENGKMEEAIHILNQMMLMEIHPNL 643
Query: 261 YKNDFFVDSFISNSLVDMYGKCGN------LALARKVFEMNPDKGLTSWNSMINCFALHG 314
F+D+ + D K + L+R+V+ N++I G
Sbjct: 644 TTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVY-----------NTLIATLCKLG 692
Query: 315 QSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIE 374
++ A V M E G + PD VTF L++ G V + S + +M E GI P +
Sbjct: 693 MTKKAAMVMGDM-EARGFI-PDTVTFNSLMHGYFVGSHVRKALSTYSVMM-EAGISPNVA 749
Query: 375 HYGCLVDLLGRAG---RFDEAMEVVRGMSMEPDEVVWGSLFNGCKVYGR-----TDLAEF 426
Y ++ L AG D+ + ++ M PD+ + +L +G G T E
Sbjct: 750 TYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEM 809
Query: 427 AAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWR 463
A L+ P Y ++++ + +GK + R + +
Sbjct: 810 IADGLV---PKTSTYNVLISE-FANVGKMLQARELLK 842
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 175/413 (42%), Gaps = 68/413 (16%)
Query: 94 RPNNFIYPHVLKSCHESRSTGAVHA--QIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEK 151
+P + Y ++ + + R V +++K Y V L+ S G + +AEK
Sbjct: 256 KPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEK 315
Query: 152 VFDEMRERNVVS----FTAMISGYARVGDVDSALKLFDEMPERDV-PS---WNALIAGCT 203
+FDEMRER + S +T++IS R G++ A LFDE+ E+ + PS + ALI G
Sbjct: 316 LFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDG-- 373
Query: 204 QNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKN 263
VC + G +L G
Sbjct: 374 ----------------------------------VCKVGEMGAAEILMNEMQSKG----- 394
Query: 264 DFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLT----SWNSMINCFALHGQSEGA 319
+ + N+L+D Y + G + A ++++ KG + N++ +CF + + A
Sbjct: 395 -VNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEA 453
Query: 320 IAVFEQMVECGGDVRPDGVTFVGLLNA-CTHGGLVEQGCSYFEMMTREYGIEPQIEHYGC 378
+M+E G V+ V++ L++ C G + E + EM ++ G++P Y
Sbjct: 454 KQWLFRMME--GGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSK--GVQPNAITYNV 509
Query: 379 LVDLLGRAGRFDEAMEVVRGMS---MEPDEVVWGSLFNGCKVYGRTDLAE--FAAKKLLE 433
++ + G+ EA ++ M M+PD + SL +G + D A F+ L
Sbjct: 510 MIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKG 569
Query: 434 IDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVPGCSWIEIDDQVH 486
+D ++ Y +M++ + + GK DE ++ +K +K Y + + + +H
Sbjct: 570 LDQNSVTYTVMISGL-SKAGKSDEAFGLYDEMK-RKGYTIDNKVYTALIGSMH 620
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 183/429 (42%), Gaps = 59/429 (13%)
Query: 55 LPYARRIFDHLHSPNIYLYTSSTFS------------LFRRMLCNSNPTTTRPNNFIYPH 102
L +R+ D SPN+++Y + S LF RM RPN+ Y
Sbjct: 352 LNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRM----GKIGLRPNDVTYSI 407
Query: 103 VLKS-CHESRSTGAVH--AQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEM--- 156
++ C + A+ ++V TG + +L++ + + G + AE EM
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCK-FGDISAAEGFMAEMINK 466
Query: 157 -RERNVVSFTAMISGYARVGDVDSALKLFDEMPERDV-PS---WNALIAGCTQNGFFSEG 211
E VV++T+++ GY G ++ AL+L+ EM + + PS + L++G + G +
Sbjct: 467 KLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDA 526
Query: 212 IRLFREMVALAAERGYRCNKPNPVTLVCALSA-CGHTSMLQLGKWIHGYVYKNDFFVDSF 270
++LF EM KPN VT + C M + +++ K D++
Sbjct: 527 VKLFNEMAEWNV-------KPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKG-IVPDTY 578
Query: 271 ISNSLVDMYGKC-GNLALARKVFEMNPDKGLTSWNS-----MINCFALHGQSEGAIAVFE 324
L+ +G C A KVF KG N +++ F G+ E A++V +
Sbjct: 579 SYRPLI--HGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQ 636
Query: 325 QMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREY---GIEPQIEHYGCLVD 381
+MV+ G D+ D V + L++ G L + F + +E G++P Y ++D
Sbjct: 637 EMVQRGVDL--DLVCYGVLID----GSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMID 690
Query: 382 LLGRAGRFDEAMEVVRGMSME---PDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEID--P 436
+ G F EA + M E P+EV + ++ NG G + AE K+ + P
Sbjct: 691 AKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVP 750
Query: 437 HNGGYGIML 445
+ YG L
Sbjct: 751 NQVTYGCFL 759
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 156/345 (45%), Gaps = 34/345 (9%)
Query: 118 AQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVV----SFTAMISGYAR 173
A+++ E + T+L+ Y G + A +++ EM + + +FT ++SG R
Sbjct: 461 AEMINKKLEPTVVTYTSLMGGYCSK-GKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFR 519
Query: 174 VGDVDSALKLFDEMPERDVP----SWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRC 229
G + A+KLF+EM E +V ++N +I G + G S+ +EM E+G
Sbjct: 520 AGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEM----TEKGIVP 575
Query: 230 NKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGN----L 285
+ + L+ L G S ++ ++ G ++K + ++ L+ + + G L
Sbjct: 576 DTYSYRPLIHGLCLTGQASEAKV--FVDG-LHKGNCELNEICYTGLLHGFCREGKLEEAL 632
Query: 286 ALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLN 345
++ +++ + D L + +I+ H + + ++M + G ++PD V + +++
Sbjct: 633 SVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRG--LKPDDVIYTSMID 690
Query: 346 ACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGM---SME 402
A + G ++ +++M E G P Y +++ L +AG +EA + M S
Sbjct: 691 AKSKTGDFKEAFGIWDLMINE-GCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSV 749
Query: 403 PDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLAN 447
P++V +G + G D+ + ++ HN +LAN
Sbjct: 750 PNQVTYGCFLD-ILTKGEVDMQK-------AVELHNAILKGLLAN 786
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 148/328 (45%), Gaps = 32/328 (9%)
Query: 115 AVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEM---RERNVV-SFTAMISG 170
AV +VK G + I+ ++ ++ G+G + A + EM R R +F +I G
Sbjct: 540 AVFEDMVKEGMKPDVILYNNIISAFC-GMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHG 598
Query: 171 YARVGDVDSALKLFDEMPE----RDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERG 226
YA+ GD+ +L++FD M V ++N LI G + + + + EM LA G
Sbjct: 599 YAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMT-LA---G 654
Query: 227 YRCNKPNPVTLVCALSACGHTSMLQLGKWIHGY--VYKNDFFVDSFISNSLVDMYGKCGN 284
N+ ++ ++ G T GK + + VD F +L+ K G
Sbjct: 655 VSANEHTYTKIMQGYASVGDT-----GKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGR 709
Query: 285 ----LALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTF 340
LA+ +++ N + +N +I+ +A G A + +QM + G V+PD T+
Sbjct: 710 MQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEG--VKPDIHTY 767
Query: 341 VGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAM---EVVR 397
++AC+ G + + E M G++P I+ Y L+ RA ++A+ E ++
Sbjct: 768 TSFISACSKAGDMNRATQTIEEM-EALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMK 826
Query: 398 GMSMEPDEVVWGSLFNGCKVYGRTDLAE 425
M ++PD+ V+ L + R +AE
Sbjct: 827 AMGIKPDKAVYHCLLTS--LLSRASIAE 852
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/298 (20%), Positives = 126/298 (42%), Gaps = 29/298 (9%)
Query: 152 VFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPERDV-PS---WNALIAGCTQNGF 207
F+++ + + F M+ Y R GD+ A + F+ M R + P+ + +LI
Sbjct: 300 AFEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRD 359
Query: 208 FSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSM----LQLGKWIHGYVYKN 263
E + R+M E G + +V S GH K IH +
Sbjct: 360 MDEALSCVRKM----KEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTL--- 412
Query: 264 DFFVDSFISNSLVDMYGKCGNL----ALARKVFEMNPDKGLTSWNSMINCFALHGQSEGA 319
++ I ++ + + N+ AL R++ E D + +++M++ + + +
Sbjct: 413 ----NASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKG 468
Query: 320 IAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCL 379
+ VF+++ ECG P VT+ L+N T G + + +M +E G++ ++ Y +
Sbjct: 469 LVVFKRLKECG--FTPTVVTYGCLINLYTKVGKISKALEVSRVM-KEEGVKHNLKTYSMM 525
Query: 380 VDLLGRAGRFDEAMEVVRGM---SMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEI 434
++ + + A V M M+PD +++ ++ + G D A K++ ++
Sbjct: 526 INGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKL 583
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 108/510 (21%), Positives = 209/510 (40%), Gaps = 89/510 (17%)
Query: 8 QVLTILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHL-- 65
++L+ + K N + L + TLG +H D Y + + C S L A + +
Sbjct: 88 KLLSAVAKMNKFELVISLGEQMQTLGISH-DLYTYSIFINCFCRRSQLSLALAVLAKMMK 146
Query: 66 --HSPNIYLYTSSTFSLFRRMLCNSNPTTT-------------RPNNFIYP---HVLKSC 107
+ P+I T S C+S + +P+ F + H L
Sbjct: 147 LGYEPDIV-----TLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 108 HESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMR----ERNVVS 163
+++ A+ Q+V+ G + + +V+ + G + A + +M E +VV
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR-GDIDLALSLLKKMEKGKIEADVVI 260
Query: 164 FTAMISGYARVGDVDSALKLFDEMPER----DVPSWNALIAGCTQNGFFSEGIRLFREMV 219
+ +I G + +D AL LF EM + DV ++++LI+ G +S+ RL +M+
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 220 ALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMY 279
R PN VT + A L + ++ + K D F +SL++ +
Sbjct: 321 E-------RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 373
Query: 280 GKCGNLALARKVFEMNPDK----GLTSWNSMINCFA------------------------ 311
L A+ +FE+ K + +++++I F
Sbjct: 374 CMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 433
Query: 312 ------LHG-----QSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYF 360
+HG + A VF+QMV G V P+ +T+ LL+ G + + F
Sbjct: 434 VTYTTLIHGFFQARDCDNAQMVFKQMVSVG--VHPNILTYNILLDGLCKNGKLAKAMVVF 491
Query: 361 EMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSME---PDEVVWGSLFNGCKV 417
E + R +EP I Y +++ + +AG+ ++ E+ +S++ P+ + + ++ +G
Sbjct: 492 EYLQRS-TMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCR 550
Query: 418 YGRTDLAEFAAKKLLEID--PHNGGYGIML 445
G + A+ KK+ E P++G Y ++
Sbjct: 551 KGSKEEADSLLKKMKEDGPLPNSGTYNTLI 580
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 126/288 (43%), Gaps = 29/288 (10%)
Query: 144 GGLGNAEKVFDEMRER----NVVSFTAMISGYARVGDVDSALKLFDEMP----ERDVPSW 195
G + A +FD+M + NVV++ +I GY ++ +D KL M E ++ S+
Sbjct: 219 GNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISY 278
Query: 196 NALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACG--HTSMLQLG 253
N +I G + G E + EM RGY ++ TL+ G H +++
Sbjct: 279 NVVINGLCREGRMKEVSFVLTEM----NRRGYSLDEVTYNTLIKGYCKEGNFHQALV--- 331
Query: 254 KWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGL----TSWNSMINC 309
+H + ++ SL+ K GN+ A + + +GL ++ ++++
Sbjct: 332 --MHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDG 389
Query: 310 FALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGI 369
F+ G A V +M + G P VT+ L+N G +E + E M +E G+
Sbjct: 390 FSQKGYMNEAYRVLREMNDNG--FSPSVVTYNALINGHCVTGKMEDAIAVLEDM-KEKGL 446
Query: 370 EPQIEHYGCLVDLLGRAGRFDEAMEVVRGM---SMEPDEVVWGSLFNG 414
P + Y ++ R+ DEA+ V R M ++PD + + SL G
Sbjct: 447 SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQG 494
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 148/359 (41%), Gaps = 58/359 (16%)
Query: 124 GFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRER----NVVSFTAMISGYARVGDVDS 179
GF + AL++ + G + +A V ++M+E+ +VVS++ ++SG+ R DVD
Sbjct: 410 GFSPSVVTYNALINGHCVT-GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDE 468
Query: 180 ALKLFDEMPER----DVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPV 235
AL++ EM E+ D ++++LI G + E L+ EM+ + P+
Sbjct: 469 ALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGL-------PPDEF 521
Query: 236 TLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKV---- 291
T ++A L+ +H + + D + L++ K A+++
Sbjct: 522 TYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKL 581
Query: 292 -FEMNPDKGLT--------------SWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPD 336
+E + +T S S+I F + G A VFE M+ G + +PD
Sbjct: 582 FYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESML--GKNHKPD 639
Query: 337 GVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVV 396
G + +++ G + + + ++ M + G LV L + G+ +E V+
Sbjct: 640 GTAYNIMIHGHCRAGDIRKAYTLYKEMVKS-GFLLHTVTVIALVKALHKEGKVNELNSVI 698
Query: 397 RGMSMEPDEVVWGSLFNGCKVYGRTDLAEF-AAKKLLEIDPHNGGYGIMLANVYGELGK 454
V +L+E AK L+EI+ G ++L +V E+ K
Sbjct: 699 ------------------VHVLRSCELSEAEQAKVLVEINHREGNMDVVL-DVLAEMAK 738
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 149/332 (44%), Gaps = 29/332 (8%)
Query: 95 PNNFIYPHVLKSCHESRSTG---AVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEK 151
PN IY V+ ++R V + K G + L+ S G +A +
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNS-GRWTDAAR 240
Query: 152 VFDEMRER----NVVSFTAMISGYARVGDVDSALKLFDEMPER----DVPSWNALIAGCT 203
+ +M +R NV+ FTA+I + + G++ A L+ EM R +V ++N+LI G
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 300
Query: 204 QNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKN 263
+G + +F MV+ P+ VT ++ + ++ G + +
Sbjct: 301 IHGCLGDAKYMFDLMVSKGCF-------PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQ 353
Query: 264 DFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLT----SWNSMINCFALHGQSEGA 319
D+F N+L+ Y + G L +A+KVF D G++ ++N +++C +G+ E A
Sbjct: 354 GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKA 413
Query: 320 IAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCL 379
+ + E + + DV D +T+ ++ +++ F +TR+ G++P Y +
Sbjct: 414 LVMVEDLQKSEMDV--DIITYNIIIQGLCRTDKLKEAWCLFRSLTRK-GVKPDAIAYITM 470
Query: 380 VDLLGRAGRFDEAMEVVRGMSME---PDEVVW 408
+ L R G EA ++ R M + P E ++
Sbjct: 471 ISGLCRKGLQREADKLCRRMKEDGFMPSERIY 502
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 146/331 (44%), Gaps = 26/331 (7%)
Query: 99 IYPHVLKSCHESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMR- 157
I H C A+ +++K GF + +L++ + +G A + D M
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQG-NRFQEAVSLVDSMDG 177
Query: 158 ---ERNVVSFTAMISGYARVGDVDSALKLFDEMPER----DVPSWNALIAGCTQNGFFSE 210
NVV + +I+G + D+++AL++F M ++ D ++N LI+G + +G +++
Sbjct: 178 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 237
Query: 211 GIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSF 270
RL R+MV + PN + + L + ++ + + + F
Sbjct: 238 AARLLRDMVKRKID-------PNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVF 290
Query: 271 ISNSLVDMYGKCGNLALARKVFEMNPDKG----LTSWNSMINCFALHGQSEGAIAVFEQM 326
NSL++ + G L A+ +F++ KG + ++N++I F + E + +F +M
Sbjct: 291 TYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM 350
Query: 327 VECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRA 386
G + D T+ L++ G + F M + G+ P I Y L+D L
Sbjct: 351 TYQG--LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMV-DCGVSPDIVTYNILLDCLCNN 407
Query: 387 GRFDEAMEVVRGMS---MEPDEVVWGSLFNG 414
G+ ++A+ +V + M+ D + + + G
Sbjct: 408 GKIEKALVMVEDLQKSEMDVDIITYNIIIQG 438
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 140/304 (46%), Gaps = 25/304 (8%)
Query: 148 NAEKVFDEMRER----NVVSFTAMISGYARVGDVDSALKLFDEMPER----DVPSWNALI 199
+A +F EM + NV++++++IS A +L +M ER +V ++NALI
Sbjct: 278 DALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALI 337
Query: 200 AGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGY 259
+ G E +L+ EM+ R P+ T ++ L K +
Sbjct: 338 DAFVKEGKLVEAEKLYDEMIK-------RSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 390
Query: 260 VYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLT----SWNSMINCFALHGQ 315
+ D F + N+L++ + K + ++F +GL ++ ++I+ F
Sbjct: 391 MISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARD 450
Query: 316 SEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEH 375
+ A VF+QMV G V P+ +T+ LL+ G +E+ FE + R +EP I
Sbjct: 451 CDNAQMVFKQMVSDG--VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS-KMEPTIYT 507
Query: 376 YGCLVDLLGRAGRFDEAMEVVRGMSM---EPDEVVWGSLFNGCKVYGRTDLAEFAAKKLL 432
Y +++ + +AG+ ++ ++ +S+ +PD +++ ++ +G G + A+ +K+
Sbjct: 508 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMR 567
Query: 433 EIDP 436
E P
Sbjct: 568 EDGP 571
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 165/365 (45%), Gaps = 44/365 (12%)
Query: 107 CHESRSTGAVHA--QIVKTGFEQYPIVQTALVDSYSRGL---GGLGNAEKVFDEMRER-- 159
CH R + AV Q+V+ G+ I T L+ GL A + D M +R
Sbjct: 166 CHGKRISDAVALVDQMVEMGYRPDTITFTTLI----HGLFLHNKASEAVALVDRMVQRGC 221
Query: 160 --NVVSFTAMISGYARVGDVDSALKLFDEMP----ERDVPSWNALIAGCTQNGFFSEGIR 213
N+V++ +++G + GD+D A L ++M E +V ++ +I + + +
Sbjct: 222 QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALN 281
Query: 214 LFREMVALAAERGYRCNKPNPVTLVCALSA-CGHTSMLQLGKWIHGYV-YKNDFFVDSFI 271
LF EM +G R PN +T +S C + + + + K + V +F
Sbjct: 282 LFTEM----ENKGVR---PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTF- 333
Query: 272 SNSLVDMYGKCGNLALARKVFE------MNPDKGLTSWNSMINCFALHGQSEGAIAVFEQ 325
N+L+D + K G L A K+++ ++PD + +++S+IN F +H + + A +FE
Sbjct: 334 -NALIDAFVKEGKLVEAEKLYDEMIKRSIDPD--IFTYSSLINGFCMHDRLDEAKHMFEL 390
Query: 326 MVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGR 385
M+ D P+ VT+ L+N +++G F M++ G+ Y L+ +
Sbjct: 391 MI--SKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQR-GLVGNTVTYTTLIHGFFQ 447
Query: 386 AGRFDEAMEVVRGM---SMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLL--EIDPHNGG 440
A D A V + M + P+ + + +L +G G+ + A + L +++P
Sbjct: 448 ARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 507
Query: 441 YGIML 445
Y IM+
Sbjct: 508 YNIMI 512
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 123/272 (45%), Gaps = 24/272 (8%)
Query: 158 ERNVVSFTAMISGYARVGDVDSALKLFDEMPER----DVPSWNALIAGCTQNGFFSEGIR 213
E ++V+ +++++GY + A+ L D+M E D ++ LI G + SE +
Sbjct: 152 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 211
Query: 214 LFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISN 273
L MV +RG C +PN VT ++ + L + + + I +
Sbjct: 212 LVDRMV----QRG--C-QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYS 264
Query: 274 SLVDMYGKCGNLALARKVFEMNPDKG----LTSWNSMINCFALHGQSEGAIAVFEQMVEC 329
+++D K + A +F +KG + +++S+I+C + + A + M+E
Sbjct: 265 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIE- 323
Query: 330 GGDVRPDGVTFVGLLNA-CTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGR 388
+ P+ VTF L++A G LVE Y EM+ R I+P I Y L++ R
Sbjct: 324 -RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR--SIDPDIFTYSSLINGFCMHDR 380
Query: 389 FDEA---MEVVRGMSMEPDEVVWGSLFNG-CK 416
DEA E++ P+ V + +L NG CK
Sbjct: 381 LDEAKHMFELMISKDCFPNVVTYNTLINGFCK 412
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 6/143 (4%)
Query: 285 LALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLL 344
++L K+ + L ++N +INCF Q A+A+ +M++ G P VT LL
Sbjct: 105 ISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLG--YEPSIVTLSSLL 162
Query: 345 NACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGM---SM 401
N HG + + + M E G P + L+ L + EA+ +V M
Sbjct: 163 NGYCHGKRISDAVALVDQMV-EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC 221
Query: 402 EPDEVVWGSLFNGCKVYGRTDLA 424
+P+ V +G + NG G DLA
Sbjct: 222 QPNLVTYGVVVNGLCKRGDIDLA 244
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 170/397 (42%), Gaps = 37/397 (9%)
Query: 95 PNNFIYPHVLKS-CHESRSTGA--VHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEK 151
P+ Y VL C+ S+ A + ++ + G T +VDS+ + G + A K
Sbjct: 481 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKA-GLIEQARK 539
Query: 152 VFDEMRE----RNVVSFTAMISGYARVGDVDSALKLFDEMPER----DVPSWNALIAGCT 203
F+EMRE NVV++TA+I Y + V A +LF+ M ++ +++ALI G
Sbjct: 540 WFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHC 599
Query: 204 QNGFFSEGIRLFREMVALA---------AERGYRCNKPNPVTLVCALSACGHTSMLQLGK 254
+ G + ++F M + +PN VT L + ++ +
Sbjct: 600 KAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEAR 659
Query: 255 WIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKG----LTSWNSMINCF 310
+ + + + ++L+D K G L A++V + G L +++S+I+ +
Sbjct: 660 KLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRY 719
Query: 311 ALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIE 370
+ + A V +M+E P+ V + +++ G ++ +MM E G +
Sbjct: 720 FKVKRQDLASKVLSKMLE--NSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM-EEKGCQ 776
Query: 371 PQIEHYGCLVDLLGRAGRFDEAMEVVRGM---SMEPDEVVWGSLFNGCKVYGRTDLAEFA 427
P + Y ++D G G+ + +E++ M + P+ V + L + C G D+A
Sbjct: 777 PNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNL 836
Query: 428 AKKLLEI--DPHNGGYGIMLANVYGE----LGKWDEV 458
+++ + H GY ++ E LG DE+
Sbjct: 837 LEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEI 873
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 150/369 (40%), Gaps = 82/369 (22%)
Query: 136 VDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARV-------GDVDSALKLFDEMP 188
V S++R L G EK F +RE F S Y++V ++ A LF+EM
Sbjct: 451 VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK 510
Query: 189 E----RDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSAC 244
DV ++ ++ + G + + F EM R C PN VT
Sbjct: 511 RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM------REVGCT-PNVVT-------- 555
Query: 245 GHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKG----L 300
+T++ IH Y+ K ++ A ++FE +G +
Sbjct: 556 -YTAL------IHAYL--------------------KAKKVSYANELFETMLSEGCLPNI 588
Query: 301 TSWNSMINCFALHGQSEGAIAVFEQMVECGG----DV------------RPDGVTFVGLL 344
+++++I+ GQ E A +FE+M CG DV RP+ VT+ LL
Sbjct: 589 VTYSALIDGHCKAGQVEKACQIFERM--CGSKDVPDVDMYFKQYDDNSERPNVVTYGALL 646
Query: 345 NACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMS---M 401
+ VE+ + M+ E G EP Y L+D L + G+ DEA EV MS
Sbjct: 647 DGFCKSHRVEEARKLLDAMSME-GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGF 705
Query: 402 EPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLE--IDPHNGGYGIMLANVYGELGKWDEVR 459
+ SL + R DLA K+LE P+ Y M+ + ++GK DE
Sbjct: 706 PATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGL-CKVGKTDEAY 764
Query: 460 NVWRILKQQ 468
+ ++++++
Sbjct: 765 KLMQMMEEK 773
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 143/358 (39%), Gaps = 30/358 (8%)
Query: 57 YARRIFDHLHSPNIYLY--------TSSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKS-C 107
Y ++ D+ PN+ Y S R++L + PN +Y ++ C
Sbjct: 626 YFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLC 685
Query: 108 HESRSTGA--VHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRER----NV 161
+ A V ++ + GF ++L+D Y + + A KV +M E NV
Sbjct: 686 KVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFK-VKRQDLASKVLSKMLENSCAPNV 744
Query: 162 VSFTAMISGYARVGDVDSALKLFDEMPER----DVPSWNALIAGCTQNGFFSEGIRLFRE 217
V +T MI G +VG D A KL M E+ +V ++ A+I G G + L
Sbjct: 745 VIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLER 804
Query: 218 MVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVD 277
M G + PN VT + C L + + + + + + +++
Sbjct: 805 M-------GSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIE 857
Query: 278 MYGK--CGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRP 335
+ K +L L ++ + + L+ + +I+ + E A+ + E++ +
Sbjct: 858 GFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVD 917
Query: 336 DGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAM 393
T+ L+ + VE F MT++ G+ P+++ + L+ L R + EA+
Sbjct: 918 YSSTYNSLIESLCLANKVETAFQLFSEMTKK-GVIPEMQSFCSLIKGLFRNSKISEAL 974
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/404 (21%), Positives = 175/404 (43%), Gaps = 41/404 (10%)
Query: 65 LHSPNIYLYTSSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKS-CHESRSTGAVH--AQIV 121
+H ++ S +L RM+ +P+ F Y V+ C A+ ++
Sbjct: 192 IHGLFLHNKASEAVALIDRMVARG----CQPDLFTYGTVVNGLCKRGDIDLALSLLKKME 247
Query: 122 KTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRER----NVVSFTAMISGYARVGDV 177
K E ++ T ++D+ + +A +F EM + NVV++ ++I G
Sbjct: 248 KGKIEADVVIYTTIIDALC-NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 306
Query: 178 DSALKLFDEMPER----DVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPN 233
A +L +M ER +V +++ALI + G E +L+ EM+ R P+
Sbjct: 307 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK-------RSIDPD 359
Query: 234 PVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFE 293
T ++ L K + + D F + N+L+ + K + ++F
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419
Query: 294 MNPDKGLT----SWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTH 349
+GL ++N++I G + A +F++MV G V PD +T+ LL+
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG--VPPDIITYSILLDGLCK 477
Query: 350 GGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSM---EPDEV 406
G +E+ FE + + +EP I Y +++ + +AG+ ++ ++ +S+ +P+ +
Sbjct: 478 YGKLEKALVVFEYLQKS-KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVI 536
Query: 407 VWGSLFNGCKVYGRTDLAEFAAKKLLEID-----PHNGGYGIML 445
++ ++ +G + R L E A E+ P++G Y ++
Sbjct: 537 IYTTMISG---FCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 577
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 120/272 (44%), Gaps = 24/272 (8%)
Query: 158 ERNVVSFTAMISGYARVGDVDSALKLFDEM----PERDVPSWNALIAGCTQNGFFSEGIR 213
E ++V+ +++++GY + A+ L D+M + + ++N LI G + SE +
Sbjct: 147 EPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVA 206
Query: 214 LFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISN 273
L MVA R +P+ T ++ + L + + K D I
Sbjct: 207 LIDRMVA-------RGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYT 259
Query: 274 SLVDMYGKCGNLALARKVFEMNPDKGL----TSWNSMINCFALHGQSEGAIAVFEQMVEC 329
+++D N+ A +F +KG+ ++NS+I C +G+ A + M+E
Sbjct: 260 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE- 318
Query: 330 GGDVRPDGVTFVGLLNA-CTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGR 388
+ P+ VTF L++A G LVE Y EM+ R I+P I Y L++ R
Sbjct: 319 -RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR--SIDPDIFTYSSLINGFCMHDR 375
Query: 389 FDEA---MEVVRGMSMEPDEVVWGSLFNG-CK 416
DEA E++ P+ V + +L G CK
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 407
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 285 LALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLL 344
++L ++ + L S+N +INCF Q A+AV +M++ G + PD VT LL
Sbjct: 100 ISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYE--PDIVTLSSLL 157
Query: 345 NACTHGGLVEQGCSYF-EMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGM---S 400
N HG + + + +M EY +P + L+ L + EA+ ++ M
Sbjct: 158 NGYCHGKRISEAVALVDQMFVMEY--QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG 215
Query: 401 MEPDEVVWGSLFNGCKVYGRTDLAEFAAKKL 431
+PD +G++ NG G DLA KK+
Sbjct: 216 CQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 246
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 155/384 (40%), Gaps = 65/384 (16%)
Query: 116 VHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVS----FTAMISGY 171
V A+++++G +L+ + G + EKVF +MR R+VV F++M+S +
Sbjct: 327 VFAEMLRSGLSPDSTTYRSLLMEACKK-GDVVETEKVFSDMRSRDVVPDLVCFSSMMSLF 385
Query: 172 ARVGDVDSALKLFDEMPER----DVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGY 227
R G++D AL F+ + E D + LI G + G S + L EM+
Sbjct: 386 TRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM-- 443
Query: 228 RCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLAL 287
+ VT L ML + + + F DS+ L+D + K GNL
Sbjct: 444 -----DVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQN 498
Query: 288 ARKVFEMNPDK----GLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGL 343
A ++F+ +K + ++N++++ F G + A ++ MV ++ P +++ L
Sbjct: 499 AMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMV--SKEILPTPISYSIL 556
Query: 344 LNA-CTHGGLVE----------------------------------QGCSYFEMMTREYG 368
+NA C+ G L E G S+ E M E G
Sbjct: 557 VNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISE-G 615
Query: 369 IEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSME-----PDEVVWGSLFNGCKVYGRTDL 423
P Y L+ R +A +V+ M E PD + S+ +G +
Sbjct: 616 FVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKE 675
Query: 424 AEFAAKKLLE--IDPHNGGYGIML 445
AE +K++E ++P Y M+
Sbjct: 676 AEVVLRKMIERGVNPDRSTYTCMI 699
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 127/288 (44%), Gaps = 59/288 (20%)
Query: 133 TALVDSYSRGLGGLGNAEKVFDEMRER----NVVSFTAMISGYARVGDVDSALKLFDEMP 188
T L+D + + LG L NA ++F +M+E+ +VV++ ++ G+ +VGD+D+A +++ +M
Sbjct: 484 TILIDGHCK-LGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMV 542
Query: 189 ERDV----PSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSAC 244
+++ S++ L+ G +E R++ EM++ P ++C
Sbjct: 543 SKEILPTPISYSILVNALCSKGHLAEAFRVWDEMIS---------KNIKPTVMIC----- 588
Query: 245 GHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWN 304
SM++ G G + F++ IS V PD S+N
Sbjct: 589 --NSMIK-GYCRSGNASDGESFLEKMISEGFV-------------------PD--CISYN 624
Query: 305 SMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNA-CTHGGLVEQGCSYFEMM 363
++I F A + ++M E G + PD T+ +L+ C + E +M+
Sbjct: 625 TLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI 684
Query: 364 TREYGIEPQIEHYGCLV------DLLGRAGRFDEAMEVVRGMSMEPDE 405
R G+ P Y C++ D L A R + M + RG S PD+
Sbjct: 685 ER--GVNPDRSTYTCMINGFVSQDNLTEAFRIHDEM-LQRGFS--PDD 727
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 129/297 (43%), Gaps = 34/297 (11%)
Query: 130 IVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARVGDVDSALKLFDEMPE 189
+ + +V+S G+ + VFD +I Y + + A + F +
Sbjct: 145 VSRLEIVNSLDSTFSNCGSNDSVFD-----------LLIRTYVQARKLREAHEAFTLLRS 193
Query: 190 R----DVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACG 245
+ + + NALI + G+ +++E+ + G N +V AL C
Sbjct: 194 KGFTVSIDACNALIGSLVRIGWVELAWGVYQEI----SRSGVGINVYTLNIMVNAL--CK 247
Query: 246 HTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLT---- 301
M ++G ++ V + + D N+L+ Y G + A ++ P KG +
Sbjct: 248 DGKMEKVGTFL-SQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVY 306
Query: 302 SWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLL-NACTHGGLVEQGCSYF 360
++N++IN HG+ E A VF +M+ G + PD T+ LL AC G +VE +
Sbjct: 307 TYNTVINGLCKHGKYERAKEVFAEMLRSG--LSPDSTTYRSLLMEACKKGDVVETEKVFS 364
Query: 361 EMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAM---EVVRGMSMEPDEVVWGSLFNG 414
+M +R+ + P + + ++ L R+G D+A+ V+ + PD V++ L G
Sbjct: 365 DMRSRD--VVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQG 419
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 147/344 (42%), Gaps = 63/344 (18%)
Query: 116 VHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMR----ERNVVSFTAMISGY 171
V Q+ TG L+D+Y + G + +++ EM E N ++ +ISG
Sbjct: 807 VFLQVKSTGCIPDVATYNFLLDAYGKS-GKIDELFELYKEMSTHECEANTITHNIVISGL 865
Query: 172 ARVGDVDSALKL-FDEMPERDVP----SWNALIAGCTQNGFFSEGIRLFREMVALAAERG 226
+ G+VD AL L +D M +RD ++ LI G +++G E +LF M+
Sbjct: 866 VKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGML------D 919
Query: 227 YRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLA 286
Y C +PN CA I N L++ +GK G
Sbjct: 920 YGC-RPN-----CA------------------------------IYNILINGFGKAGEAD 943
Query: 287 LARKVFEMNPDKG----LTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVG 342
A +F+ +G L +++ +++C + G+ + + F+++ E G + PD V +
Sbjct: 944 AACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESG--LNPDVVCYNL 1001
Query: 343 LLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEV---VRGM 399
++N +E+ F M GI P + Y L+ LG AG +EA ++ ++
Sbjct: 1002 IINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRA 1061
Query: 400 SMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLE--IDPHNGGY 441
+EP+ + +L G + G+ + A + ++ P+ G Y
Sbjct: 1062 GLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 153/391 (39%), Gaps = 36/391 (9%)
Query: 102 HVLKSCHESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRER-- 159
H+L V+ +++ GF P +QT S GLG + + V ++E
Sbjct: 196 HLLLKSRFCTEAMEVYRRMILEGFR--PSLQT--YSSLMVGLGKRRDIDSVMGLLKEMET 251
Query: 160 -----NVVSFTAMISGYARVGDVDSALKLFDEMPER----DVPSWNALIAGCTQNGFFSE 210
NV +FT I R G ++ A ++ M + DV ++ LI
Sbjct: 252 LGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDC 311
Query: 211 GIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSF 270
+F +M + G +KP+ VT + L L K + K+ D
Sbjct: 312 AKEVFEKM-----KTGR--HKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVV 364
Query: 271 ISNSLVDMYGKCGNLALARKVFEMNPDKG----LTSWNSMINCFALHGQSEGAIAVFEQM 326
LVD K GN A ++ D+G L ++N++I + + A+ +F M
Sbjct: 365 TFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNM 424
Query: 327 VECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRA 386
G V+P T++ ++ G FE M + GI P I + L +A
Sbjct: 425 ESLG--VKPTAYTYIVFIDYYGKSGDSVSALETFEKM-KTKGIAPNIVACNASLYSLAKA 481
Query: 387 GRFDEAMEVVRGMS---MEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGI 443
GR EA ++ G+ + PD V + + K Y + + A K L E+ + +
Sbjct: 482 GRDREAKQIFYGLKDIGLVPDSVTYNMMM---KCYSKVGEIDEAIKLLSEMMENGCEPDV 538
Query: 444 MLAN-VYGELGKWDEVRNVWRILKQQKSYKV 473
++ N + L K D V W++ + K K+
Sbjct: 539 IVVNSLINTLYKADRVDEAWKMFMRMKEMKL 569
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 117/533 (21%), Positives = 190/533 (35%), Gaps = 73/533 (13%)
Query: 19 LNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHLHS----PNIYLYT 74
L+ +KQ + + GH D F ++ N A D + PN++ Y
Sbjct: 344 LDSVKQFWSEMEKDGHV-PDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYN 402
Query: 75 SSTFSLFR--------RMLCNSNPTTTRPNNFIYPHVLK------------SCHESRSTG 114
+ L R + N +P + Y + E T
Sbjct: 403 TLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTK 462
Query: 115 AVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFTAMISGYARV 174
+ IV Y + + + GL + V D V++ M+ Y++V
Sbjct: 463 GIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDS------VTYNMMMKCYSKV 516
Query: 175 GDVDSALKLFDEMPER----DVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCN 230
G++D A+KL EM E DV N+LI + E ++F M +
Sbjct: 517 GEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKL------- 569
Query: 231 KPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARK 290
KP VT L+ G +Q + + + ++ N+L D K + LA K
Sbjct: 570 KPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALK 629
Query: 291 VFEMNPDKGLT----SWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNA 346
+ D G ++N++I +GQ + A+ F QM + V PD VT LL
Sbjct: 630 MLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL---VYPDFVTLCTLLPG 686
Query: 347 CTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLV-DLLGRAG-----RFDEAMEVVRGMS 400
L+E +P + L+ +L AG F E + V G+
Sbjct: 687 VVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERL-VANGIC 745
Query: 401 MEPDEVVWGSLFNGCK---VYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGELGKWDE 457
+ D ++ + CK V G L E K L + P Y +++ G L + D
Sbjct: 746 RDGDSILVPIIRYSCKHNNVSGARTLFEKFTKD-LGVQPKLPTYNLLI----GGLLEADM 800
Query: 458 VRNVWRILKQQKSYKVPGCSWIEIDDQVHQFFSLDQ--SSPKAEELYSVLESL 508
+ + Q KS GC I D F LD S K +EL+ + + +
Sbjct: 801 IEIAQDVFLQVKS---TGC----IPDVATYNFLLDAYGKSGKIDELFELYKEM 846
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 94/437 (21%), Positives = 167/437 (38%), Gaps = 97/437 (22%)
Query: 136 VDSYSRGLGGLGNAEKV------FDEMRER----NVVSFTAMISGYARVGDVDSALKLFD 185
V +Y+ L GLG K+ F+ M ++ N ++F + + +V ALK+
Sbjct: 573 VVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLF 632
Query: 186 EMPER----DVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCAL 241
+M + DV ++N +I G +NG E + F +M L P+ VTL L
Sbjct: 633 KMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVY--------PDFVTLCTLL 684
Query: 242 SACGHTSMLQLG-KWIHGYVYK------NDFFVD---SFISNSLVDMYGKCGNLALARKV 291
S+++ K I ++Y N F+ D S ++ + +D +A +
Sbjct: 685 PGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGI 744
Query: 292 FEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGG 351
G + +I H GA +FE+ + G V+P T+ L+
Sbjct: 745 CR----DGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLG-VQPKLPTYNLLIGGLLEAD 799
Query: 352 LVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMS----------- 400
++E F + + G P + Y L+D G++G+ DE E+ + MS
Sbjct: 800 MIEIAQDVF-LQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITH 858
Query: 401 ----------------------------MEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLL 432
P +G L +G GR + AK+L
Sbjct: 859 NIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRL----YEAKQLF 914
Query: 433 E------IDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQ------KSYKVPG---CS 477
E P+ Y I++ N +G+ G+ D +++ + ++ K+Y V C
Sbjct: 915 EGMLDYGCRPNCAIYNILI-NGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCM 973
Query: 478 WIEIDDQVHQFFSLDQS 494
+D+ +H F L +S
Sbjct: 974 VGRVDEGLHYFKELKES 990
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 154/344 (44%), Gaps = 37/344 (10%)
Query: 118 AQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRER-----NVVSFTAMISGYA 172
++I+K GF + T+L+ + RGL L +A KVFD M + N VS++ +I G
Sbjct: 219 SKILKIGFVLDSHIGTSLLLGFCRGLN-LRDALKVFDVMSKEVTCAPNSVSYSILIHGLC 277
Query: 173 RVGDVDSALKLFDEMPER----DVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYR 228
VG ++ A L D+M E+ ++ LI G + LF EM+ R
Sbjct: 278 EVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIP-------R 330
Query: 229 CNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALA 288
KPN T + ++ + + K+ F N+L++ Y K G + A
Sbjct: 331 GCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPA 390
Query: 289 RKVFEMNPDKG----LTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLL 344
++ + + + ++N ++ G+ A+ + ++M++ G + PD V++ L+
Sbjct: 391 FELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG--LSPDIVSYNVLI 448
Query: 345 NACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEA-----MEVVRGM 399
+ G + M + IEP + +++ + G+ D A + + +G+
Sbjct: 449 DGLCREGHMNTAYKLLSSMNC-FDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGI 507
Query: 400 SMEPDEVVWGSLFNG-CKVYGRTDLAEFAAKKLLEI----DPHN 438
S+ DEV +L +G CKV G+T A F + L+++ PH+
Sbjct: 508 SL--DEVTGTTLIDGVCKV-GKTRDALFILETLVKMRILTTPHS 548
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 176/444 (39%), Gaps = 83/444 (18%)
Query: 88 SNPTTTRPNNFIYPHVLKS-CHESRSTGA--VHAQIVKTGFE----QYPIVQTALVDSYS 140
S T PN+ Y ++ C R A + Q+ + G + Y ++ AL D
Sbjct: 257 SKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCD--- 313
Query: 141 RGLGGLGNAEKVFDEMRER----NVVSFTAMISGYARVGDVDSALKLFDEM-PERDVPS- 194
RGL + A +FDEM R NV ++T +I G R G ++ A + +M +R PS
Sbjct: 314 RGL--IDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSV 371
Query: 195 --WNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVT---LVCALSACGHTSM 249
+NALI G ++G L M R KPN T L+ L G
Sbjct: 372 ITYNALINGYCKDGRVVPAFELLTVMEK-------RACKPNVRTFNELMEGLCRVGKPY- 423
Query: 250 LQLGKWIH--GYVYKNDFFVDSFISNSLVDMYGKCGNLALARKV------FEMNPDKGLT 301
K +H + N D N L+D + G++ A K+ F++ PD
Sbjct: 424 ----KAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPD--CL 477
Query: 302 SWNSMINCFALHGQSEGAIAVFEQMV-------ECGGDVRPDGVTFVG-------LLNAC 347
++ ++IN F G+++ A A M+ E G DGV VG +L
Sbjct: 478 TFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETL 537
Query: 348 THG-------------GLVEQGCSYFEMMT-----REYGIEPQIEHYGCLVDLLGRAGRF 389
++ +GC E + + G+ P + Y LVD L R+G
Sbjct: 538 VKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDI 597
Query: 390 DEAMEVVRGMSME---PDEVVWGSLFNGCKVYGRTDLAE--FAAKKLLEIDPHNGGYGIM 444
+ ++ M + P+ + + NG +GR + AE +A + + P++ Y +M
Sbjct: 598 TGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVM 657
Query: 445 LANVYGELGKWDEVRNVWRILKQQ 468
+ Y GK D R + ++
Sbjct: 658 VKG-YVNNGKLDRALETVRAMVER 680
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 124/278 (44%), Gaps = 45/278 (16%)
Query: 144 GGLGNAEKVFDEMR----ERNVVSFTAMISGYARVGDVDSALKLFDEMPER-----DVPS 194
G NA+KVF+EM +R+V+SF A++S Y D +LF+E+P + D+ S
Sbjct: 123 GMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVS 182
Query: 195 WNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGK 254
+N LI + E + L E+ +G KP+ VT L + +LG+
Sbjct: 183 YNTLIKALCEKDSLPEAVALLDEI----ENKGL---KPDIVTFNTLLLSSYLKGQFELGE 235
Query: 255 WIHGYVYKNDFFVD-------------SFISNSLVDMYGKCGNLALARKVFEMNPDKGLT 301
I + + + +D S LV+++G+ L VF
Sbjct: 236 EIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVF--------- 286
Query: 302 SWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYF- 360
S+N+MI G+ + A A ++++V+ G RPD TF LL A G E F
Sbjct: 287 SFNAMIRGSINEGKMDEAEAWYKEIVKHG--YRPDKATFALLLPAMCKAGDFESAIELFK 344
Query: 361 EMMTREYGI-EPQIEHYGCLVDLLGRAGRFDEAMEVVR 397
E ++ Y + + ++ LVD L + + +EA E+V+
Sbjct: 345 ETFSKRYLVGQTTLQQ---LVDELVKGSKREEAEEIVK 379
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 173/401 (43%), Gaps = 44/401 (10%)
Query: 96 NNFIYPHVLKSCHESRSTGA---VHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKV 152
N+F Y +L++ SR V+ +I + G + L+D+ ++ A +V
Sbjct: 202 NSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKD----EKACQV 257
Query: 153 FDEMRERNV----VSFTAMISGYARVGDVDSALKLFDEMPER----DVPSWNALIAGCTQ 204
F++M++R+ ++T MI R+G D A+ LF+EM +V +N L+ +
Sbjct: 258 FEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAK 317
Query: 205 NGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKND 264
+ I++F MV E G R N+ L+ L A G L G V +
Sbjct: 318 GKMVDKAIQVFSRMV----ETGCRPNEYTYSLLLNLLVAEGQLVRLD------GVVEISK 367
Query: 265 FFVDSFISNSLVDMYGKCGNLALARKVF-EM--NPDKG-LTSWNSMINCFALHGQSEGAI 320
++ I + LV K G+++ A ++F +M P KG S+ SM+ G++ AI
Sbjct: 368 RYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAI 427
Query: 321 AVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLV 380
+ ++ E G V D + + + +A + FE M ++ G P I Y L+
Sbjct: 428 EMLSKIHEKG--VVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKD-GPSPDIFTYNILI 484
Query: 381 DLLGRAGRFDEAMEVVRGMSM---EPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLE--ID 435
GR G DEA+ + + +PD + + SL N G D A K++ E ++
Sbjct: 485 ASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLN 544
Query: 436 PHNGGYGIMLANVYGELGKWDEVRNVWRILKQQKSYKVPGC 476
P Y ++ GK + V + + ++ V GC
Sbjct: 545 PDVVTYSTLMEC----FGKTERVEMAYSLFEEM---LVKGC 578
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 118/263 (44%), Gaps = 29/263 (11%)
Query: 164 FTAMISGYARVGDVDSALKLFDEM------PERDVPSWNALIAGCTQNGFFSEGIRLFRE 217
++ ++ +++G V A +LF +M ERD S+ +++ G E I E
Sbjct: 375 YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERD--SYMSMLESLCGAGKTIEAI----E 428
Query: 218 MVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVD 277
M++ E+G + T+ AL S + + + K+ D F N L+
Sbjct: 429 MLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIH---DLFEKMKKDGPSPDIFTYNILIA 485
Query: 278 MYGKCGNLALARKVFE------MNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGG 331
+G+ G + A +FE PD + S+NS+INC +G + A F++M E G
Sbjct: 486 SFGRVGEVDEAINIFEELERSDCKPD--IISYNSLINCLGKNGDVDEAHVRFKEMQEKG- 542
Query: 332 DVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDE 391
+ PD VT+ L+ VE S FE M + G +P I Y L+D L + GR E
Sbjct: 543 -LNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVK-GCQPNIVTYNILLDCLEKNGRTAE 600
Query: 392 AMEVVRGMSME---PDEVVWGSL 411
A+++ M + PD + + L
Sbjct: 601 AVDLYSKMKQQGLTPDSITYTVL 623
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 133/306 (43%), Gaps = 72/306 (23%)
Query: 70 IYLYTSSTFSLF------RRMLCNSNPTTTRPNNFIYPHVLKS-CHESRSTGAVHAQIVK 122
IY Y T S R+ C+ + Y +L+S C ++ A+ +++
Sbjct: 374 IYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAI--EMLS 431
Query: 123 TGFEQYPIVQTALVDSYSRGLGGLGNAEKV---FDEMRER----NVVSFTAMISGYARVG 175
E+ + T + ++ LG L + F++M++ ++ ++ +I+ + RVG
Sbjct: 432 KIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVG 491
Query: 176 DVDSALKLFDEMPER-----DVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCN 230
+VD A+ +F+E+ ER D+ S+N+LI +NG E F+EM E+G
Sbjct: 492 EVDEAINIFEEL-ERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEM----QEKGL--- 543
Query: 231 KPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARK 290
NP D ++L++ +GK + +A
Sbjct: 544 --NP---------------------------------DVVTYSTLMECFGKTERVEMAYS 568
Query: 291 VFEMNPDKG----LTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGL--L 344
+FE KG + ++N +++C +G++ A+ ++ +M + G + PD +T+ L L
Sbjct: 569 LFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQG--LTPDSITYTVLERL 626
Query: 345 NACTHG 350
+ +HG
Sbjct: 627 QSVSHG 632
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 136/306 (44%), Gaps = 21/306 (6%)
Query: 160 NVVSFTAMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMV 219
+V ++T ++ Y+R G + A+ LF+ M E PS + + F G R +R+++
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMG-PSPTLVTYNVILDVFGKMG-RSWRKIL 266
Query: 220 ALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMY 279
+ E + K + T LSAC +L+ K + + + N+L+ ++
Sbjct: 267 GVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVF 326
Query: 280 GKCG----NLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRP 335
GK G L++ +++ E + ++N ++ + G S+ A V E M + G V P
Sbjct: 327 GKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKG--VMP 384
Query: 336 DGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEV 395
+ +T+ +++A G ++ F M +E G P Y ++ LLG+ R +E +++
Sbjct: 385 NAITYTTVIDAYGKAGKEDEALKLFYSM-KEAGCVPNTCTYNAVLSLLGKKSRSNEMIKM 443
Query: 396 VRGMSM---EPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEI-----DPHNGGYGIMLAN 447
+ M P+ W ++ C G + +F + E+ +P + +++
Sbjct: 444 LCDMKSNGCSPNRATWNTMLALC---GNKGMDKFVNRVFREMKSCGFEPDRDTFNTLIS- 499
Query: 448 VYGELG 453
YG G
Sbjct: 500 AYGRCG 505
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 135/329 (41%), Gaps = 24/329 (7%)
Query: 80 LFRRML-CNSNPTTTRPNNFIYPHVLKSCHESRSTGAVHAQIVKTGFEQYPIVQTALVDS 138
+FR M C P N I + C ++ ++ + GF AL+++
Sbjct: 478 VFREMKSCGFEPDRDTFNTLISAY--GRCGSEVDASKMYGEMTRAGFNACVTTYNALLNA 535
Query: 139 YSRGLGGLGNAEKVFDEMRERNV----VSFTAMISGYARVGDVDSALKLFDEMPERDV-P 193
+R G + E V +M+ + S++ M+ YA+ G+ ++ + + E + P
Sbjct: 536 LARK-GDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFP 594
Query: 194 SWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLG 253
SW L N F + L + GY KP+ V LS +M
Sbjct: 595 SWMLLRTLLLAN-FKCRALAGSERAFTLFKKHGY---KPDMVIFNSMLSIFTRNNMYDQA 650
Query: 254 KWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVF------EMNPDKGLTSWNSMI 307
+ I + ++ D NSL+DMY + G A ++ ++ PD L S+N++I
Sbjct: 651 EGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPD--LVSYNTVI 708
Query: 308 NCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREY 367
F G + A+ + +M E G +RP T+ ++ T G+ + E M +
Sbjct: 709 KGFCRRGLMQEAVRMLSEMTERG--IRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKN- 765
Query: 368 GIEPQIEHYGCLVDLLGRAGRFDEAMEVV 396
P + +VD RAG++ EAM+ V
Sbjct: 766 DCRPNELTFKMVVDGYCRAGKYSEAMDFV 794
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 138/333 (41%), Gaps = 59/333 (17%)
Query: 130 IVQTALVDSYSRGLGGLGNAEKVFDEMRER----NVVSFTAMISGYARVGDVDSALKLFD 185
+ LV +Y R G A V + M ++ N +++T +I Y + G D ALKLF
Sbjct: 352 VTYNELVAAYVRA-GFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFY 410
Query: 186 EMPERD-VP---SWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCAL 241
M E VP ++NA+++ + +E I++ +M + C+ PN T L
Sbjct: 411 SMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDM------KSNGCS-PNRATWNTML 463
Query: 242 SACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVF-EMNP---D 297
+ CG+ M + + + F D N+L+ YG+CG+ A K++ EM +
Sbjct: 464 ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFN 523
Query: 298 KGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGG------ 351
+T++N+++N A G V M G +P ++ +L GG
Sbjct: 524 ACVTTYNALLNALARKGDWRSGENVISDMKSKG--FKPTETSYSLMLQCYAKGGNYLGIE 581
Query: 352 ----LVEQGCSYFEMMT------------------------REYGIEPQIEHYGCLVDLL 383
+++G + M +++G +P + + ++ +
Sbjct: 582 RIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIF 641
Query: 384 GRAGRFDEA---MEVVRGMSMEPDEVVWGSLFN 413
R +D+A +E +R + PD V + SL +
Sbjct: 642 TRNNMYDQAEGILESIREDGLSPDLVTYNSLMD 674
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 124/283 (43%), Gaps = 21/283 (7%)
Query: 197 ALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWI 256
+L+ G +G + + LF E + L++ G K + + + G S + +
Sbjct: 141 SLVKGLDDSGHWERAVFLF-EWLVLSSNSG--ALKLDHQVIEIFVRILGRESQYSVAAKL 197
Query: 257 HGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFE----MNPDKGLTSWNSMINCFAL 312
+ ++ +D +++ Y + G A +FE M P L ++N +++ F
Sbjct: 198 LDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGK 257
Query: 313 HGQS-EGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEP 371
G+S + V ++M G ++ D T +L+AC GL+ + +F + + G EP
Sbjct: 258 MGRSWRKILGVLDEMRSKG--LKFDEFTCSTVLSACAREGLLREAKEFFAEL-KSCGYEP 314
Query: 372 QIEHYGCLVDLLGRAGRFDEAMEVVRGM---SMEPDEVVWGSLFNGCKVYGRTDLA---- 424
Y L+ + G+AG + EA+ V++ M S D V + L G + A
Sbjct: 315 GTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVI 374
Query: 425 EFAAKKLLEIDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQ 467
E KK + P+ Y ++ + YG+ GK DE ++ +K+
Sbjct: 375 EMMTKK--GVMPNAITYTTVI-DAYGKAGKEDEALKLFYSMKE 414
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 164/394 (41%), Gaps = 74/394 (18%)
Query: 134 ALVDSYS-----RGLGGLGNAEKVFDEMRER-------NVVSFTAMISGYARVGDVDSAL 181
++D YS +G G EK FD + E NVV +T +I G + G+++ A
Sbjct: 159 VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAK 218
Query: 182 KLFDEMPE----RDVPSWNALIAGCTQNGFFSEGIRLFREMVALAA-------------- 223
LF EM + + ++ LI G +NG +G ++ +M
Sbjct: 219 DLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQL 278
Query: 224 -----------------ERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFF 266
ERG CN TL+ L C + + K + K+D
Sbjct: 279 CKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGL--CREMKLNEANKVVDQ--MKSDGI 334
Query: 267 VDSFIS-NSLVDMY---GKCGN-LALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIA 321
+ I+ N+L+D + GK G L+L R + L ++N +++ F G + GA
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAK 394
Query: 322 VFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVD 381
+ ++M E G ++P VT+ L++ +E+ + E G+ P + Y L+
Sbjct: 395 MVKEMEERG--IKPSKVTYTILIDTFARSDNMEKAIQ-LRLSMEELGLVPDVHTYSVLIH 451
Query: 382 LLGRAGRFDEAMEVVRGM---SMEPDEVVWGSLFNG-CKVYGRTDLAEFAAKKLL----- 432
G+ +EA + + M + EP+EV++ ++ G CK + + + A KLL
Sbjct: 452 GFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCK-----EGSSYRALKLLKEMEE 506
Query: 433 -EIDPHNGGYGIMLANVYGELGKWDEVRNVWRIL 465
E+ P+ Y M+ + E + R V +++
Sbjct: 507 KELAPNVASYRYMIEVLCKERKSKEAERLVEKMI 540
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 146/328 (44%), Gaps = 42/328 (12%)
Query: 115 AVHAQIVKTGFEQYPIVQTA--LVDSYSRGLGGLGNAEK--VFDEMRER------NVVSF 164
A+H FE P V T +V++Y R GN +K VF + E NVV++
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRS----GNVDKAMVFAKETESSLGLELNVVTY 264
Query: 165 TAMISGYARVGDVDSALKLFDEMPE----RDVPSWNALIAGCTQNGFFSEG---IRLFRE 217
++I+GYA +GDV+ ++ M E R+V ++ +LI G + G E L +E
Sbjct: 265 NSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKE 324
Query: 218 MVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVD 277
+A + Y + T ++ +H + + ++ I NSL++
Sbjct: 325 KKLVADQHMYG----------VLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLIN 374
Query: 278 MYGKCGNLALARKVFEMNPDKGLT----SWNSMINCFALHGQSEGAIAVFEQMVECGGDV 333
Y K G L A ++F D L ++N++++ + G + A+ + +QM C +V
Sbjct: 375 GYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQM--CQKEV 432
Query: 334 RPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAM 393
P +T+ LL + G S ++MM + G+ L++ L + G F+EAM
Sbjct: 433 VPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKR-GVNADEISCSTLLEALFKLGDFNEAM 491
Query: 394 EV---VRGMSMEPDEVVWGSLFNG-CKV 417
++ V + D + + +G CK+
Sbjct: 492 KLWENVLARGLLTDTITLNVMISGLCKM 519
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 166/374 (44%), Gaps = 46/374 (12%)
Query: 115 AVHAQIVKTGFEQYPIVQTALVDSYSRGL---GGLGNAEKVFDEMRER----NVVSFTAM 167
+V +++K G+E T ++ +GL G + A + D M E +VV++ ++
Sbjct: 144 SVLGKVMKLGYEP----DTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSI 199
Query: 168 ISGYARVGDVDSALKLFDEMPER----DVPSWNALIAGCTQNGFFSEGIRLFREMVALAA 223
++G R GD AL L +M ER DV +++ +I ++G I LF+EM
Sbjct: 200 VNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM----E 255
Query: 224 ERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDF----FVDSFIS-NSLVDM 278
+G + + +LV L + GKW G + D V + I+ N L+D+
Sbjct: 256 TKGIKSSVVTYNSLVRGLC--------KAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 279 YGKCGNLALARKVFEMNPDKGLT----SWNSMINCFALHGQSEGAIAVFEQMVECGGDVR 334
+ K G L A ++++ +G++ ++N++++ + + + A + + MV
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR--NKCS 365
Query: 335 PDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAME 394
PD VTF L+ V+ G F +++ G+ Y LV ++G+ A E
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKR-GLVANAVTYSILVQGFCQSGKIKLAEE 424
Query: 395 VVRGM---SMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEIDPHNGGYGIMLANVYGE 451
+ + M + PD + +G L +G G+ E A + ++ GI++ E
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGK---LEKALEIFEDLQKSKMDLGIVMYTTIIE 481
Query: 452 -LGKWDEVRNVWRI 464
+ K +V + W +
Sbjct: 482 GMCKGGKVEDAWNL 495
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 151/384 (39%), Gaps = 74/384 (19%)
Query: 77 TFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCH-ESRSTG---AVHAQIVKTGFEQYPIVQ 132
FS +R+ML T NF+ L C+ + R TG V A ++K GF
Sbjct: 91 AFSFYRKML-----ETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNH 145
Query: 133 TALVDSYSRGLGGLGNAEKVFDEMRER----NVVSFTAMISGYARVGDVDSALKLFDEMP 188
L+ R L G A + EMR +V S+ +I G+ +++ AL+L +EM
Sbjct: 146 NILLKGLCRNLE-CGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMK 204
Query: 189 ER----DVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSAC 244
+ +W LI + G E + +EM + E
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLE-------------------- 244
Query: 245 GHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKG----L 300
D + SL+ + CG L + +F+ ++G
Sbjct: 245 ----------------------ADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCA 282
Query: 301 TSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYF 360
++N++I F GQ + A +FE M+E G VRP+ T+ GL++ G ++
Sbjct: 283 ITYNTLIRGFCKLGQLKEASEIFEFMIERG--VRPNVYTYTGLIDGLCGVGKTKEALQLL 340
Query: 361 EMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMS---MEPDEVVWGSLFNGCKV 417
+M E EP Y +++ L + G +A+E+V M PD + + L G +
Sbjct: 341 NLMI-EKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGG--L 397
Query: 418 YGRTDLAEFAAKKLLEIDPHNGGY 441
+ DL E A KLL + + Y
Sbjct: 398 CAKGDLDE--ASKLLYLMLKDSSY 419
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 154/365 (42%), Gaps = 35/365 (9%)
Query: 93 TRPNNFIYPHVLKS-CHESRSTGAVHAQ--IVKTGFEQYPIVQTALVDSYSRGLGGLGNA 149
RPN + Y ++ C ++ A+ +++ E + +++ + G + +A
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKD-GLVADA 371
Query: 150 EKVFDEMRERNV----VSFTAMISGYARVGDVDSALKLFDEM------PERDVPSWNALI 199
++ + M++R +++ ++ G GD+D A KL M + DV S+NALI
Sbjct: 372 VEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALI 431
Query: 200 AGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGY 259
G + + + ++ +V + G + L L A ++L K I
Sbjct: 432 HGLCKENRLHQALDIYDLLVE---KLGAGDRVTTNILLNSTLKAGDVNKAMELWKQIS-- 486
Query: 260 VYKNDFFVDSFISNSLVDMYGKCGNLALAR------KVFEMNPDKGLTSWNSMINCFALH 313
+ +S +++D + K G L +A+ +V E+ P + +N +++
Sbjct: 487 --DSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQP--SVFDYNCLLSSLCKE 542
Query: 314 GQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQI 373
G + A +FE+M + PD V+F +++ G ++ S M+R G+ P +
Sbjct: 543 GSLDQAWRLFEEMQR--DNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRA-GLSPDL 599
Query: 374 EHYGCLVDLLGRAGRFDEAMEVVRGM---SMEPDEVVWGSLFNGCKVYGRTDLAEFAAKK 430
Y L++ + G DEA+ M EPD + S+ C G TD KK
Sbjct: 600 FTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKK 659
Query: 431 LLEID 435
L++ D
Sbjct: 660 LVDKD 664
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 149/347 (42%), Gaps = 31/347 (8%)
Query: 99 IYPHVLK---SCHESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDE 155
+Y +++ C E A+ ++++ G I L+ + + LG L A ++F+
Sbjct: 249 VYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK-LGQLKEASEIFEF 307
Query: 156 MRER----NVVSFTAMISGYARVGDVDSALKLFDEMPERD----VPSWNALIAGCTQNGF 207
M ER NV ++T +I G VG AL+L + M E+D ++N +I ++G
Sbjct: 308 MIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGL 367
Query: 208 FSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSA-CGHTSMLQLGKWIHGYVYKNDFF 266
++ + E+V L +R R P+ +T L C + + K ++ + + +
Sbjct: 368 VADAV----EIVELMKKRRTR---PDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYT 420
Query: 267 VDSFIS-NSLVDMYGKCGNLALARKVFEMNPDK----GLTSWNSMINCFALHGQSEGAIA 321
IS N+L+ K L A ++++ +K + N ++N G A+
Sbjct: 421 DPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAME 480
Query: 322 VFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVD 381
+++Q+ + + + T+ +++ G++ M R ++P + Y CL+
Sbjct: 481 LWKQISD--SKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKM-RVSELQPSVFDYNCLLS 537
Query: 382 LLGRAGRFDEAMEVVRGMSME---PDEVVWGSLFNGCKVYGRTDLAE 425
L + G D+A + M + PD V + + +G G AE
Sbjct: 538 SLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAE 584
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 165/382 (43%), Gaps = 36/382 (9%)
Query: 116 VHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEK---VFDEMRERNV----VSFTAMI 168
V ++I K F AL+ S+ G LG E+ V+ +M+E + ++ ++
Sbjct: 174 VSSEIKKFEFPMTVSAANALIKSF----GKLGMVEELLWVWRKMKENGIEPTLYTYNFLM 229
Query: 169 SGYARVGDVDSALKLFDEMP----ERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAE 224
+G VDSA ++F+ M + D+ ++N +I G + G + + R+M
Sbjct: 230 NGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDM----ET 285
Query: 225 RGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGN 284
RG+ +K +T + + AC S ++ + + V + ++ K G
Sbjct: 286 RGHEADK---ITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGK 342
Query: 285 LALARKVFEMNPDKG----LTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTF 340
L VFE KG + + +I+ +A G E AI + +M++ G +PD VT+
Sbjct: 343 LNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEG--FKPDVVTY 400
Query: 341 VGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMS 400
++N G VE+ YF R G+ Y L+D LG+AGR DEA + MS
Sbjct: 401 SVVVNGLCKNGRVEEALDYFHT-CRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMS 459
Query: 401 ME---PDEVVWGSLFNGCKVYGRTDLAEFAAKKLLE---IDPHNGGYGIMLANVYGELGK 454
+ D + +L + + + D A K++ E D Y I+L+ ++ E +
Sbjct: 460 EKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKE-HR 518
Query: 455 WDEVRNVWRILKQQKSYKVPGC 476
+E +W ++ + C
Sbjct: 519 NEEALKLWDMMIDKGITPTAAC 540
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 143/347 (41%), Gaps = 70/347 (20%)
Query: 130 IVQTALVDSYSRGLGGLGNAEKVFDEMRERNVV----SFTAMISGYARVGDVDSALKLFD 185
++Q DS G+ ++ EM E+ + +F+ +I G + G ++ +F+
Sbjct: 298 MIQACYADS------DFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFE 351
Query: 186 EMPER----DVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCAL 241
M + +V + LI G ++G + IRL M+ + G+ KP+ VT +
Sbjct: 352 NMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMI----DEGF---KPDVVTYSVVV 404
Query: 242 SA-CGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGL 300
+ C + + + + H + + ++S +SL+D GK G + A ++FE +KG
Sbjct: 405 NGLCKNGRVEEALDYFHTCRF-DGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGC 463
Query: 301 TS----WNSMINCFALHGQSEGAIAVFEQMVECGG------------------------- 331
T +N++I+ F H + + AIA+F++M E G
Sbjct: 464 TRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEAL 523
Query: 332 ---------DVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGC--LV 380
+ P F L G V + C + + G+ I C ++
Sbjct: 524 KLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELA-PMGV---ILDAACEDMI 579
Query: 381 DLLGRAGRFDEAMEVVRGMSMEPDEV---VWGSLFNGCKVYGRTDLA 424
+ L +AGR EA ++ G++ EV + + N + G+ DLA
Sbjct: 580 NTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLA 626
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 105/242 (43%), Gaps = 13/242 (5%)
Query: 175 GDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNP 234
G +D ++FD MP RD SW + GC + G + + LF M+ + + ++ P+
Sbjct: 137 GRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKI--PSW 194
Query: 235 VTLVCALSACGHTSMLQLGKWIHGYVYKNDFF--VDSFISNSLVDMYGKCGNLALARKVF 292
+ L C L AC +LGK +H +K F DS++S SL+ YG+ L A V
Sbjct: 195 I-LGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVL 253
Query: 293 EMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNAC---TH 349
+ +W + + G+ + I F +M G ++ + F +L AC +
Sbjct: 254 HQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHG--IKKNVSVFSNVLKACSWVSD 311
Query: 350 GGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMSMEPDEVVWG 409
GG Q + + G E L+++ G+ G+ +A +V + E W
Sbjct: 312 GGRSGQQVHANAI---KLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWN 368
Query: 410 SL 411
++
Sbjct: 369 AM 370
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 131/347 (37%), Gaps = 61/347 (17%)
Query: 6 NEQVLTILGKS----NHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRI 61
NE + + L K N +LQ H+ T + +L+ ++ L R++
Sbjct: 87 NEDIYSCLAKESARENDQRGAHELQVHIMKSSIRPTITFINRLL-LMHVSCGRLDITRQM 145
Query: 62 FDHL-----HSPNIYL--------YTSSTFSLFRRMLCNSNPTTTRPNNFIYPHVLKSCH 108
FD + HS I Y + F LF ML +S + ++I VLK+C
Sbjct: 146 FDRMPHRDFHSWAIVFLGCIEMGDYEDAAF-LFVSMLKHSQKGAFKIPSWILGCVLKACA 204
Query: 109 ESRS---TGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRERNVVSFT 165
R VHA K GF DSY G
Sbjct: 205 MIRDFELGKQVHALCHKLGFIDEE-------DSYLSG----------------------- 234
Query: 166 AMISGYARVGDVDSALKLFDEMPERDVPSWNALIAGCTQNGFFSEGIRLFREMVALAAER 225
++I Y ++ A + ++ + +W A + + G F E IR F EM
Sbjct: 235 SLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEM------- 287
Query: 226 GYRCNKPNPVTLVCALSACGHTSM-LQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGN 284
G K N L AC S + G+ +H K F D I L++MYGK G
Sbjct: 288 GNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGK 347
Query: 285 LALARKVFEMNPDK-GLTSWNSMINCFALHGQSEGAIAVFEQMVECG 330
+ A KVF+ + D+ ++ WN+M+ + +G AI + QM G
Sbjct: 348 VKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQMKATG 394
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 94 RPNNFIYPHVLKSC----HESRSTGAVHAQIVKTGFEQYPIVQTALVDSYSRGLGGLGNA 149
+ N ++ +VLK+C RS VHA +K GFE +++ L++ Y + G + +A
Sbjct: 293 KKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGK-YGKVKDA 351
Query: 150 EKVFDEMRERNVVS-FTAMISGYARVGDVDSALKLFDEMPERDVPSWNALI 199
EKVF ++ VS + AM++ Y + G A+KL +M + + + L+
Sbjct: 352 EKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQMKATGIKAHDTLL 402
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 166/387 (42%), Gaps = 69/387 (17%)
Query: 160 NVVSFTAMISGYARVGDVDSALKLFDEMPER----DVPSWNALIAGCTQNGFFSEGIRLF 215
+V FT I+ + + G V+ A+KLF +M E +V ++N +I G G + E
Sbjct: 259 DVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK 318
Query: 216 REMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGK--WIHGYVYKNDFFVDSFISN 273
+MV ERG P + ++ G T ++G ++ + K F + + N
Sbjct: 319 EKMV----ERGM-----EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYN 369
Query: 274 SLVDMYGKCGNLALARKVFEMNPDKGL----TSWNSMINCFALHGQSEGAIAVFEQMVEC 329
+L+D + + G+L A ++ ++ KGL +++N++I + +GQ++ A + ++M+
Sbjct: 370 NLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSI 429
Query: 330 GGDVRPDGVT-----------------FVG---LLNACTHGGLVEQGCS----------- 358
G +V T FVG L N GGL+ S
Sbjct: 430 GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 489
Query: 359 ---YFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEV---VRGMSMEPDEVVWGSLF 412
+F+ + + + ++ + + L+ L AG+ DEA + + G D V + +L
Sbjct: 490 LELWFQFLNKGFVVDTRTSN--ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLI 547
Query: 413 NGCKVYGRTDLAEFAAKKLLE--IDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQK- 469
+GC + D A ++++ + P N Y I++ ++ + K +E W K+
Sbjct: 548 SGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFN-MNKVEEAIQFWDDCKRNGM 606
Query: 470 -------SYKVPGCSWIEIDDQVHQFF 489
S + GC E ++ +FF
Sbjct: 607 LPDVYTYSVMIDGCCKAERTEEGQEFF 633
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 114/262 (43%), Gaps = 25/262 (9%)
Query: 166 AMISGYARVGDVDSALKLFDEMPER----DVPSWNALIAGCTQNGFFSEGIRLFREMVAL 221
A++ G G +D A ++ E+ R D S+N LI+GC E EMV
Sbjct: 510 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV-- 567
Query: 222 AAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGY--VYKNDFFVDSFISNSLVDMY 279
+RG KP+ T ++ CG +M ++ + I + +N D + + ++D
Sbjct: 568 --KRGL---KPDNYTY--SILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 620
Query: 280 GKCGNLALARKVFE----MNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRP 335
K ++ F+ N +N +I + G+ A+ + E M G + P
Sbjct: 621 CKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG--ISP 678
Query: 336 DGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEV 395
+ T+ L+ + VE+ FE M E G+EP + HY L+D G+ G+ + +
Sbjct: 679 NSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALIDGYGKLGQMVKVECL 737
Query: 396 VRGM---SMEPDEVVWGSLFNG 414
+R M ++ P+++ + + G
Sbjct: 738 LREMHSKNVHPNKITYTVMIGG 759
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 66/152 (43%), Gaps = 11/152 (7%)
Query: 287 LARKVFEMNPDKGL----TSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVG 342
LA VF + +KG+ T+ N ++ + + F+ V C G V PD F
Sbjct: 209 LALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD--VVCKG-VSPDVYLFTT 265
Query: 343 LLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGM--- 399
+NA GG VE+ F M E G+ P + + ++D LG GR+DEA M
Sbjct: 266 AINAFCKGGKVEEAVKLFSKM-EEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVER 324
Query: 400 SMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKL 431
MEP + + L G R A F K++
Sbjct: 325 GMEPTLITYSILVKGLTRAKRIGDAYFVLKEM 356
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 12/137 (8%)
Query: 93 TRPNNFIYPHVLKS-CHESRSTGAVHAQ--IVKTGFEQYPIVQTALVDSYSRGLGGLGNA 149
+PN +Y H++++ C R + A+ + + G T+L+ S + + A
Sbjct: 641 VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSI-ISRVEEA 699
Query: 150 EKVFDEMR----ERNVVSFTAMISGYARVGDVDSALKLFDEMPERDV----PSWNALIAG 201
+ +F+EMR E NV +TA+I GY ++G + L EM ++V ++ +I G
Sbjct: 700 KLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGG 759
Query: 202 CTQNGFFSEGIRLFREM 218
++G +E RL EM
Sbjct: 760 YARDGNVTEASRLLNEM 776
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 166/387 (42%), Gaps = 69/387 (17%)
Query: 160 NVVSFTAMISGYARVGDVDSALKLFDEMPER----DVPSWNALIAGCTQNGFFSEGIRLF 215
+V FT I+ + + G V+ A+KLF +M E +V ++N +I G G + E
Sbjct: 259 DVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK 318
Query: 216 REMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGK--WIHGYVYKNDFFVDSFISN 273
+MV ERG P + ++ G T ++G ++ + K F + + N
Sbjct: 319 EKMV----ERGM-----EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYN 369
Query: 274 SLVDMYGKCGNLALARKVFEMNPDKGL----TSWNSMINCFALHGQSEGAIAVFEQMVEC 329
+L+D + + G+L A ++ ++ KGL +++N++I + +GQ++ A + ++M+
Sbjct: 370 NLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSI 429
Query: 330 GGDVRPDGVT-----------------FVG---LLNACTHGGLVEQGCS----------- 358
G +V T FVG L N GGL+ S
Sbjct: 430 GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 489
Query: 359 ---YFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEV---VRGMSMEPDEVVWGSLF 412
+F+ + + + ++ + + L+ L AG+ DEA + + G D V + +L
Sbjct: 490 LELWFQFLNKGFVVDTRTSN--ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLI 547
Query: 413 NGCKVYGRTDLAEFAAKKLLE--IDPHNGGYGIMLANVYGELGKWDEVRNVWRILKQQK- 469
+GC + D A ++++ + P N Y I++ ++ + K +E W K+
Sbjct: 548 SGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFN-MNKVEEAIQFWDDCKRNGM 606
Query: 470 -------SYKVPGCSWIEIDDQVHQFF 489
S + GC E ++ +FF
Sbjct: 607 LPDVYTYSVMIDGCCKAERTEEGQEFF 633
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 114/262 (43%), Gaps = 25/262 (9%)
Query: 166 AMISGYARVGDVDSALKLFDEMPER----DVPSWNALIAGCTQNGFFSEGIRLFREMVAL 221
A++ G G +D A ++ E+ R D S+N LI+GC E EMV
Sbjct: 510 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV-- 567
Query: 222 AAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGY--VYKNDFFVDSFISNSLVDMY 279
+RG KP+ T ++ CG +M ++ + I + +N D + + ++D
Sbjct: 568 --KRGL---KPDNYTY--SILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 620
Query: 280 GKCGNLALARKVFE----MNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRP 335
K ++ F+ N +N +I + G+ A+ + E M G + P
Sbjct: 621 CKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG--ISP 678
Query: 336 DGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEV 395
+ T+ L+ + VE+ FE M E G+EP + HY L+D G+ G+ + +
Sbjct: 679 NSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALIDGYGKLGQMVKVECL 737
Query: 396 VRGM---SMEPDEVVWGSLFNG 414
+R M ++ P+++ + + G
Sbjct: 738 LREMHSKNVHPNKITYTVMIGG 759
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 66/152 (43%), Gaps = 11/152 (7%)
Query: 287 LARKVFEMNPDKGL----TSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTFVG 342
LA VF + +KG+ T+ N ++ + + F+ V C G V PD F
Sbjct: 209 LALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD--VVCKG-VSPDVYLFTT 265
Query: 343 LLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGM--- 399
+NA GG VE+ F M E G+ P + + ++D LG GR+DEA M
Sbjct: 266 AINAFCKGGKVEEAVKLFSKM-EEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVER 324
Query: 400 SMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKL 431
MEP + + L G R A F K++
Sbjct: 325 GMEPTLITYSILVKGLTRAKRIGDAYFVLKEM 356
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 12/137 (8%)
Query: 93 TRPNNFIYPHVLKS-CHESRSTGAVHAQ--IVKTGFEQYPIVQTALVDSYSRGLGGLGNA 149
+PN +Y H++++ C R + A+ + + G T+L+ S + + A
Sbjct: 641 VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSI-ISRVEEA 699
Query: 150 EKVFDEMR----ERNVVSFTAMISGYARVGDVDSALKLFDEMPERDV----PSWNALIAG 201
+ +F+EMR E NV +TA+I GY ++G + L EM ++V ++ +I G
Sbjct: 700 KLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGG 759
Query: 202 CTQNGFFSEGIRLFREM 218
++G +E RL EM
Sbjct: 760 YARDGNVTEASRLLNEM 776
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 99/456 (21%), Positives = 187/456 (41%), Gaps = 80/456 (17%)
Query: 8 QVLTILGKSNHLNHLKQLQAHLTTLGHAHTDFYAFKLVRFCALTLSNLPYARRIFDHL-- 65
+VL+ + KS + + + L H+ G H D Y++ +V C S A + +
Sbjct: 74 KVLSKIAKSKNYDLVISLFHHMEVCGIGH-DLYSYNIVINCLCRCSRFVIALSVVGKMMK 132
Query: 66 --HSPNIYLYTS--STFSLFRR------MLCNSNPTTTRPNNFIYPHVLK-SCHESRSTG 114
+ P++ +S + F R ++ RP+ IY ++ SC
Sbjct: 133 FGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVND 192
Query: 115 AVHA--QIVKTGFEQYPIVQTALVDSYSRGLGGLGNAEKVFDEMRER----NVVSFTAMI 168
AV ++ + G + +LV G +A ++ +M R NV++FTA+I
Sbjct: 193 AVELFDRMERDGVRADAVTYNSLVAGLCCS-GRWSDAARLMRDMVMRDIVPNVITFTAVI 251
Query: 169 SGYARVGDVDSALKLFDEMPER----DVPSWNALIAGCTQNGFFSEGIRLFREMVALAAE 224
+ + G A+KL++EM R DV ++N+LI G +G E ++M+ L
Sbjct: 252 DVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEA----KQMLDLMVT 307
Query: 225 RGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSLVDMYGKCGN 284
+G P+ VT N+L++ + K
Sbjct: 308 KGCL---PDVVTY-----------------------------------NTLINGFCKSKR 329
Query: 285 LALARKVFEMNPDKGLT----SWNSMINCFALHGQSEGAIAVFEQMVECGGDVRPDGVTF 340
+ K+F +GL ++N++I + G+ + A +F +M D RP+ T+
Sbjct: 330 VDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM-----DSRPNIRTY 384
Query: 341 VGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAMEVVRGMS 400
LL VE+ FE M + IE I Y ++ + + G ++A ++ R +S
Sbjct: 385 SILLYGLCMNWRVEKALVLFENMQKS-EIELDITTYNIVIHGMCKIGNVEDAWDLFRSLS 443
Query: 401 ---MEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLE 433
++PD V + ++ +G + D ++ +K+ E
Sbjct: 444 CKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQE 479
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 120/283 (42%), Gaps = 54/283 (19%)
Query: 160 NVVSFTAMISGYARVGDVDSALKLFDEMPE----RDVPSWNALIAGCTQNGFFSEGIRLF 215
++V F+ ++S A+ + D + LF M D+ S+N +I + F + +
Sbjct: 68 SIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVV 127
Query: 216 REMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKNDFFVDSFISNSL 275
+M+ E P+ VT+ I+G+ N F
Sbjct: 128 GKMMKFGYE-------PDVVTV---------------SSLINGFCQGNRVF--------- 156
Query: 276 VDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGDVRP 335
+ L K+ EM + +N++I+ G A+ +F++M G VR
Sbjct: 157 -------DAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDG--VRA 207
Query: 336 DGVTFVGLLNA-CTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDEAME 394
D VT+ L+ C G + +M+ R+ I P + + ++D+ + G+F EAM+
Sbjct: 208 DAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD--IVPNVITFTAVIDVFVKEGKFSEAMK 265
Query: 395 VVRGMS---MEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEI 434
+ M+ ++PD + SL NG ++GR D AK++L++
Sbjct: 266 LYEEMTRRCVDPDVFTYNSLINGLCMHGRVD----EAKQMLDL 304
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 139/322 (43%), Gaps = 68/322 (21%)
Query: 144 GGLGNAEKVFDEMRER----NVVSFTAMISGYARVGDVDSALKLFDEMPER----DVPSW 195
G +A ++ +M ER NVV+F+A+I + + G + A KL+DEM +R D+ ++
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 364
Query: 196 NALIAGCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKW 255
++LI G + E +F M++
Sbjct: 365 SSLINGFCMHDRLDEAKHMFELMIS----------------------------------- 389
Query: 256 IHGYVYKNDFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGL----TSWNSMINCFA 311
D F + N+L+ + K + ++F +GL ++ ++I+ F
Sbjct: 390 -------KDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFF 442
Query: 312 LHGQSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEP 371
+ + A VF+QMV G V PD +T+ LL+ + G VE FE + R +EP
Sbjct: 443 QARECDNAQIVFKQMVSDG--VLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS-KMEP 499
Query: 372 QIEHYGCLVDLLGRAGRFDEAMEVVRGMSM---EPDEVVWGSLFNGCKVYGRTDLAEFAA 428
I Y +++ + +AG+ ++ ++ +S+ +P+ V + ++ +G + R L E A
Sbjct: 500 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSG---FCRKGLKEEAD 556
Query: 429 KKLLEID-----PHNGGYGIML 445
E+ P +G Y ++
Sbjct: 557 ALFREMKEEGPLPDSGTYNTLI 578
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 143/322 (44%), Gaps = 24/322 (7%)
Query: 160 NVVSFTAMISGYARVGDVDSALKLFDEMP----ERDVPSWNALIAGCTQNGFFSEGIRLF 215
N+ +++ +I+ + R + AL + +M E D+ + N+L+ G S+ + L
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV 174
Query: 216 REMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYVYKN---DFFVDSFIS 272
+MV E GY+ + TL+ L H + + V K D +
Sbjct: 175 GQMV----EMGYQPDSFTFNTLIHGLFR--HNRASEAVALVDRMVVKGCQPDLVTYGIVV 228
Query: 273 NSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVFEQMVECGGD 332
N L L+L +K+ + + G+ +N++I+ + A+ +F +M G
Sbjct: 229 NGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG-- 286
Query: 333 VRPDGVTFVGLLNA-CTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLLGRAGRFDE 391
+RP+ VT+ L+ C +G + +M+ R+ I P + + L+D + G+ E
Sbjct: 287 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK--INPNVVTFSALIDAFVKEGKLVE 344
Query: 392 AMEVVRGM---SMEPDEVVWGSLFNGCKVYGRTDLAEFAAKKLLEID--PHNGGYGIMLA 446
A ++ M S++PD + SL NG ++ R D A+ + ++ D P+ Y ++
Sbjct: 345 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 404
Query: 447 NVYGELGKWDEVRNVWRILKQQ 468
+ + + DE ++R + Q+
Sbjct: 405 G-FCKAKRVDEGMELFREMSQR 425
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 95/214 (44%), Gaps = 17/214 (7%)
Query: 208 FSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTS----MLQLGKWIHGYVYKN 263
+ + LF +MV R + P+ V LSA + ++ LG+ + +
Sbjct: 62 LDDAVNLFGDMVK---SRPF----PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISH 114
Query: 264 DFFVDSFISNSLVDMYGKCGNLALARKVFEMNPDKGLTSWNSMINCFALHGQSEGAIAVF 323
+ + S + N LA+ K+ ++ + + + NS++N F + A+++
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV 174
Query: 324 EQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIEHYGCLVDLL 383
QMVE G +PD TF L++ + + + M + G +P + YG +V+ L
Sbjct: 175 GQMVEMG--YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVK-GCQPDLVTYGIVVNGL 231
Query: 384 GRAGRFDEAMEVVRGM---SMEPDEVVWGSLFNG 414
+ G D A+ +++ M +EP V++ ++ +
Sbjct: 232 CKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDA 265
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 154/365 (42%), Gaps = 40/365 (10%)
Query: 94 RPNNFIYPHVLKS-CHESRSTGA--VHAQIVKTGFEQYPIVQTALVDSYSR--GLGGLGN 148
+PN F + V+ + C + A V + G + L+D Y + G G +
Sbjct: 220 QPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYK 279
Query: 149 AEKVFDEMRER----NVVSFTAMISGYARVGDVDSALKLFDEMPERDVP----SWNALIA 200
A+ V EM E N+ +F +I G+ + ++ ++K+F EM ++DV S+N+LI
Sbjct: 280 ADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLIN 339
Query: 201 GCTQNGFFSEGIRLFREMVALAAERGYRCNKPNPVTLVCALSACGHTSMLQLGKWIHGYV 260
G G SE I + +MV+ + PN +T ++ ML+ + G V
Sbjct: 340 GLCNGGKISEAISMRDKMVSAGVQ-------PNLITYNALINGFCKNDMLKEALDMFGSV 392
Query: 261 YKNDFFVDSFISNSLVDMYGKCGNL----ALARKVFE--MNPDKGLTSWNSMINCFALHG 314
+ + N L+D Y K G + AL ++ + PD G ++N +I +G
Sbjct: 393 KGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVG--TYNCLIAGLCRNG 450
Query: 315 QSEGAIAVFEQMVECGGDVRPDGVTFVGLLNACTHGGLVEQGCSYFEMMTREYGIEPQIE 374
E A +F+Q+ G PD VTF L+ G + + M++ G++P+
Sbjct: 451 NIEAAKKLFDQLTSKG---LPDLVTFHILMEGYCRKGESRKAAMLLKEMSK-MGLKPRHL 506
Query: 375 HYGCLVDLLGRAGRFDEA------MEVVRGMSMEPDEVVWGSLFNGCKVYGRTDLAEFAA 428
Y ++ + G A ME R + M + + L G G+ + A
Sbjct: 507 TYNIVMKGYCKEGNLKAATNMRTQMEKERRLRM--NVASYNVLLQGYSQKGKLEDANMLL 564
Query: 429 KKLLE 433
++LE
Sbjct: 565 NEMLE 569