Miyakogusa Predicted Gene

Lj2g3v0499030.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0499030.1 Non Chatacterized Hit- tr|K4CIN5|K4CIN5_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,33.19,1e-17,DUF1442,Protein of unknown function DUF1442; no
description,NULL; seg,NULL,CUFF.34639.1
         (224 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G62280.1 | Symbols:  | Protein of unknown function (DUF1442) ...   197   4e-51
AT3G60780.1 | Symbols:  | Protein of unknown function (DUF1442) ...    75   4e-14
AT2G45360.1 | Symbols:  | Protein of unknown function (DUF1442) ...    74   1e-13
AT1G12320.1 | Symbols:  | Protein of unknown function (DUF1442) ...    62   4e-10
AT1G62840.1 | Symbols:  | Protein of unknown function (DUF1442) ...    54   9e-08

>AT5G62280.1 | Symbols:  | Protein of unknown function (DUF1442) |
           chr5:25017165-25017985 FORWARD LENGTH=236
          Length = 236

 Score =  197 bits (502), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 124/235 (52%), Positives = 156/235 (66%), Gaps = 15/235 (6%)

Query: 1   MACWSAENATKAYLSTLKMGQNAKEPDVAEFISALAAGNNAQLMVVACAGAADSTTL-AL 59
           MA WSAENATKAYLSTLK  Q  KEP+VAEFISALAAGN+A+ + VACAGAA++  L AL
Sbjct: 1   MAFWSAENATKAYLSTLKTDQRTKEPNVAEFISALAAGNSARKIAVACAGAANADILVAL 60

Query: 60  IAAAHQTGGNVVCIVKSHEDLKASKKFLRLGA-SQVQFMVGEA-QELLLN----QADFVL 113
           IAAA+QT G VVC+++  E+L  S+K L      Q+QF+VGE+  + L+N    +ADFVL
Sbjct: 61  IAAANQTRGQVVCVLRGIEELIISQKMLEPSEIHQIQFVVGESNDDTLINNHFGEADFVL 120

Query: 114 IDCNLVNHEEIVKAIIQXXXXXXXX-----XXXXXXYTAFGCRGSW-WSCESKTQLLPIG 167
           +DCNL NH+EIV  I+                    Y AF  RGSW +S   KTQ LPIG
Sbjct: 121 VDCNLENHQEIVGKILNHHEENARTGGGSGVAVVVGYNAFS-RGSWRFSDGRKTQFLPIG 179

Query: 168 EGLLVTRFGGAEVSTTSTKYGSKMSKNRSRWVVTVDKCTGEEHVYRIRHPQGKVI 222
           EGLLVTR    +       +  ++ + +SRWVV VDKCTGEEHV+R+R P+G+ I
Sbjct: 180 EGLLVTRVNDNQKMMMKNHHRDQVMR-KSRWVVKVDKCTGEEHVFRVRVPRGEAI 233


>AT3G60780.1 | Symbols:  | Protein of unknown function (DUF1442) |
           chr3:22462695-22463630 FORWARD LENGTH=218
          Length = 218

 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 104/223 (46%), Gaps = 23/223 (10%)

Query: 4   WSAENATKAYLSTLKMGQNAKEPDVAEFISALAAGNNAQLMVVACA-GAADSTTLALIAA 62
           WS E A+ AY+ T++  ++ ++  VAEF+SA AAG N +L+V   + G   +T++ L  A
Sbjct: 5   WSPETASNAYIHTVRSCKSYRDSSVAEFLSATAAGWNTRLIVETWSRGDPIATSVGLAVA 64

Query: 63  AHQTGGNVVCIVKSHEDLKASKKFLR--LGASQVQFMVGEAQELLLNQ---ADFVLIDCN 117
           A  T G  VCIV   E     +  +R  + +   + MV ++ E ++ +    DF+++D  
Sbjct: 65  AIHTCGRHVCIVPDEESRSEYEAVMRGAVTSDSTEVMVLDSAEDVVERISGVDFMVVDS- 123

Query: 118 LVNHEEIVKAIIQXXXXXXXXXXXXXXYTAFGCRGSWW-------SCESKTQLLPIGEGL 170
                E V A+                 T     G  W       +   ++  LP+G GL
Sbjct: 124 --KRHEFVNALGLAKTSKMGAVLVCKNATLKSIPGFKWQGLLRRGTRVVRSVFLPVGRGL 181

Query: 171 LVTRFGGAEVSTTSTKYGSKMSKNRSRWVVTVDKCTGEEHVYR 213
            +   G       ++  G+ + K  SRW+  +D  +GEEH+++
Sbjct: 182 EIVHVG-------ASGGGNGLRKIPSRWIKHIDPRSGEEHLFK 217


>AT2G45360.1 | Symbols:  | Protein of unknown function (DUF1442) |
           chr2:18698619-18699360 FORWARD LENGTH=215
          Length = 215

 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 101/222 (45%), Gaps = 24/222 (10%)

Query: 4   WSAENATKAYLSTLKMGQNAKEPDVAEFISALAAGNNAQLMVVACA-GAADSTTLALIAA 62
           WS E A+ AY+ T+K  ++ KE  VAEF+SA AAG NA+L+V   + G   +T++ L  A
Sbjct: 5   WSPETASDAYIDTVKSCKSDKESGVAEFLSATAAGWNARLIVETWSRGDPITTSVGLAVA 64

Query: 63  AHQTGGNVVCIVKSHEDLKASKKFLRLGASQVQFMVGEAQELLLNQ---ADFVLIDCNLV 119
           A  TGG  VCIV   +        +R   +    +VGE+ E  + +    DF+++D    
Sbjct: 65  ATHTGGRHVCIVPDEQSKLEYVLAMRGFVTTEVVVVGESVENTMEEFPGVDFLVVDS--- 121

Query: 120 NHEEIVKAIIQXXXXXXXXXXXXXXYTAFGCRGSWW-------SCESKTQLLPIGEGLLV 172
              E V+ +                       G  W       +   ++  LP+G GL +
Sbjct: 122 KRREFVRTLRFAKLSNKGAVLVCKNAMHRAISGFKWHDVLKRGTRVVRSVFLPVGSGLDI 181

Query: 173 TRFGGAEVSTTSTKYGSKMSKN-RSRWVVTVDKCTGEEHVYR 213
              G           G   S+N RSRW+  VD  +GEEH++R
Sbjct: 182 VHVGAT---------GRGDSRNLRSRWIRHVDHLSGEEHLFR 214


>AT1G12320.1 | Symbols:  | Protein of unknown function (DUF1442) |
           chr1:4189424-4190209 FORWARD LENGTH=212
          Length = 212

 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 105/233 (45%), Gaps = 47/233 (20%)

Query: 4   WSAENATKAYLSTLKMGQNAKEPDVAEFISALAAGNNAQLMVVACA-GAADSTTLALIAA 62
           WS E A+KAY+ T+K  +N + PD AE I+A+AAG N +L+V   + G A ++++ L  A
Sbjct: 5   WSPETASKAYIDTVKSCENLETPDAAELIAAMAAGWNVKLIVETWSEGDAIASSIGLNVA 64

Query: 63  AHQTGGNVVCIVKSHEDLKASKKFLRLGASQVQF---MVGEAQELLLNQ---ADFVLIDC 116
           +       +CIV++     A  + ++  +S + F   +V E     + +    DF+++D 
Sbjct: 65  SKHANAKHICIVQNSRSESAYLQAIQESSSPLNFPETIVAEEPGKAMKKLQGVDFLVVDW 124

Query: 117 NLVNHEEIVKAIIQXXXXXXXXXXXXXXYTAFGCRGSWWSCES---------------KT 161
              N E                        AFG RG+   C +               +T
Sbjct: 125 R--NKE---------------FAAAALKNAAFGNRGAVVVCRNGYSSLRRVLRDRKVVRT 167

Query: 162 QLLPIGEGLLVTRFGGAEVSTTSTKYGSKMSKNRSRWVVTVDKCTGEEHVYRI 214
             LP+         GG E++  + +   K   N+ RW+  VD+ +GEEHV+ I
Sbjct: 168 VTLPVT--------GGIEIAHVAARNSGKSGNNKRRWITHVDQRSGEEHVFSI 212


>AT1G62840.1 | Symbols:  | Protein of unknown function (DUF1442) |
           chr1:23271481-23272407 FORWARD LENGTH=224
          Length = 224

 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 104/244 (42%), Gaps = 59/244 (24%)

Query: 4   WSAENATKAYLSTLKMGQNAKEPDVAEFISALAAGNNAQLMVVACA-GAADSTTLALIAA 62
           WS E A+KAY+ T+K  +N   P  AE ++A+AAG NA L+V   + G   + ++ L  A
Sbjct: 5   WSPETASKAYIDTVKSCENLGTPGAAELVAAMAAGWNANLIVETWSEGETIAISVGLNIA 64

Query: 63  AHQTGGNVVCIVKSHEDLKASKKFLRLGASQ-------VQFMVGEAQEL-----LLNQAD 110
           +  T G  +CIV    + ++   +L+  A Q          M  E +EL      L   D
Sbjct: 65  SRHTNGRHICIVP---NARSQTAYLQAMAEQSCSNLPETIIMNEEGEELEHTMQTLQGID 121

Query: 111 FVLIDCNLVNHEEIVKAIIQXXXXXXXXXXXXXXYTAFGCRGSWWSCES----------- 159
           F+++D    + ++    +++                 FG RG+   C S           
Sbjct: 122 FLVVDW---DQKDFAANVLRNA--------------VFGSRGAVVVCRSGYRRSTSCFSW 164

Query: 160 ----------KTQLLPIGEGLLVTRFGGAEVSTTSTKYGSKMSKNRSRWVVTVDKCTGEE 209
                     +T  LP+  GL +     A V+   +   S  + N+ +W+   D+ +GEE
Sbjct: 165 TKAFSDRNVVRTVTLPVSGGLEI-----AHVAAARSSGKSDNNSNKRKWIKHFDQRSGEE 219

Query: 210 HVYR 213
           HV R
Sbjct: 220 HVIR 223