Miyakogusa Predicted Gene
- Lj2g3v0489020.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0489020.2 Non Chatacterized Hit- tr|I1MQ91|I1MQ91_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.29938 PE,81.54,0,PPR:
pentatricopeptide repeat domain,Pentatricopeptide repeat; no
description,Tetratricopeptide-like,CUFF.34641.2
(623 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 513 e-145
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 496 e-140
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 479 e-135
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 465 e-131
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 457 e-129
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 452 e-127
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 450 e-126
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 441 e-124
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 437 e-123
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 431 e-121
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 427 e-119
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 420 e-117
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 417 e-116
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 410 e-114
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 410 e-114
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 406 e-113
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 404 e-113
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 402 e-112
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 400 e-111
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 399 e-111
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 394 e-110
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 389 e-108
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 385 e-107
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 385 e-107
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 384 e-107
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 384 e-107
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 382 e-106
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 382 e-106
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 382 e-106
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 380 e-105
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 380 e-105
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 380 e-105
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 379 e-105
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 377 e-104
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 375 e-104
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 370 e-102
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 370 e-102
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 368 e-102
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 368 e-102
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 366 e-101
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 365 e-101
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 364 e-100
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 364 e-100
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 362 e-100
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 360 1e-99
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 360 2e-99
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 360 2e-99
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 360 2e-99
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 359 3e-99
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 358 5e-99
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 358 6e-99
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 357 2e-98
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 354 1e-97
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 353 1e-97
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 351 8e-97
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 351 8e-97
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 351 1e-96
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 349 4e-96
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 347 1e-95
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 345 7e-95
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 344 1e-94
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 341 1e-93
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 340 2e-93
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 339 3e-93
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 338 7e-93
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 336 4e-92
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 335 4e-92
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 333 2e-91
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 333 3e-91
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 330 2e-90
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 330 2e-90
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 329 4e-90
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 327 2e-89
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 324 1e-88
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 324 1e-88
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 323 3e-88
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 321 7e-88
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 318 5e-87
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 318 1e-86
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 316 3e-86
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 4e-86
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 314 1e-85
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 314 1e-85
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 313 2e-85
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 311 1e-84
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 310 2e-84
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 309 5e-84
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 307 1e-83
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 307 2e-83
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 307 2e-83
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 306 2e-83
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 3e-83
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 304 1e-82
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 303 2e-82
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 302 4e-82
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 2e-81
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 296 3e-80
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 295 8e-80
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 295 8e-80
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 294 1e-79
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 294 1e-79
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 5e-77
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 5e-77
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 7e-76
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 3e-74
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 6e-74
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 9e-73
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 3e-72
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 269 4e-72
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 3e-71
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 4e-71
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 9e-71
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 1e-70
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 264 1e-70
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 5e-70
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 9e-70
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 1e-69
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 7e-69
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 3e-68
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 256 4e-68
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 254 1e-67
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 4e-67
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 4e-67
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 251 9e-67
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 2e-66
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 251 2e-66
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 3e-66
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 5e-66
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 7e-66
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 248 1e-65
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 6e-65
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 244 9e-65
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 243 3e-64
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 3e-64
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 3e-64
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 4e-64
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 5e-64
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 6e-64
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 7e-64
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 8e-64
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 241 8e-64
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 1e-63
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 2e-63
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 4e-63
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 1e-62
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 237 2e-62
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 2e-62
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 236 3e-62
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 4e-62
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 234 2e-61
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 2e-61
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 3e-61
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 230 3e-60
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 6e-60
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 9e-60
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 228 1e-59
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 226 3e-59
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 226 3e-59
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 225 9e-59
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 222 8e-58
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 9e-58
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 2e-57
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 2e-57
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 9e-56
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 5e-55
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 210 2e-54
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 3e-53
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 206 4e-53
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 7e-53
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 1e-52
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 6e-52
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 8e-52
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 1e-51
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 2e-50
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 196 5e-50
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 196 6e-50
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 6e-49
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 1e-48
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 2e-48
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 5e-48
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 5e-48
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 1e-47
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 185 1e-46
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 2e-45
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 6e-45
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 2e-43
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 5e-43
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 1e-42
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 1e-42
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 6e-41
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 7e-41
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 4e-39
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 4e-39
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 137 3e-32
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 7e-32
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 123 4e-28
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 117 2e-26
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 9e-26
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 3e-25
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 4e-21
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 4e-21
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 8e-21
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 4e-20
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 2e-19
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 94 3e-19
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 3e-19
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 3e-19
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 4e-19
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 93 4e-19
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 6e-19
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 7e-19
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 7e-19
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 8e-19
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 8e-19
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 8e-19
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 2e-18
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 7e-18
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 88 1e-17
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 3e-17
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 5e-17
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 7e-17
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 86 9e-17
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 86 9e-17
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 1e-16
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 2e-16
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-16
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 84 2e-16
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 6e-16
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 6e-16
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 83 6e-16
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 7e-16
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 80 3e-15
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 80 3e-15
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 4e-15
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 6e-15
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 6e-15
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 7e-15
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 7e-15
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 75 1e-13
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 3e-13
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 3e-13
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 7e-13
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 7e-13
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 2e-12
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 70 5e-12
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 69 9e-12
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 69 1e-11
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 67 3e-11
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 64 4e-10
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 5e-10
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 63 8e-10
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 2e-09
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 2e-09
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 61 2e-09
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 60 3e-09
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 60 4e-09
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 8e-09
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 59 9e-09
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 2e-08
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 58 2e-08
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 57 3e-08
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 57 4e-08
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-08
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 9e-08
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-07
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 54 3e-07
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 50 4e-06
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 513 bits (1321), Expect = e-145, Method: Compositional matrix adjust.
Identities = 261/610 (42%), Positives = 369/610 (60%), Gaps = 16/610 (2%)
Query: 22 SLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVADAS----LSYAHKLFDQIPQP 77
S + C +++KQ HA+++ T L+ + KFL ++ L YA +FD +P
Sbjct: 19 SCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRP 78
Query: 78 DLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQ 137
D F++N MI+ S S L+ R+L S N Y+F AC N + +E Q
Sbjct: 79 DTFLWNLMIRGFSCSDEPERSLLLYQRMLC--SSAPHNAYTFPSLLKACSNLSAFEETTQ 136
Query: 138 VRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGN 197
+ + K+G +++V+ VN+LI Y G + +F+ + D SWN++I YV +G
Sbjct: 137 IHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGK 196
Query: 198 MSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAA 257
M A LF +M E++ +SW+T+I+GYVQ EAL FH M +P+ + +AL+A
Sbjct: 197 MDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSA 256
Query: 258 CSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWP 317
C+ L AL+QGKWIHS++ + I+M+ L +IDMYAKCGE+E A VF ++ K+ V
Sbjct: 257 CAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVF-KNIKKKSVQA 315
Query: 318 WNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMV 377
W A+I G+A HG EAI F +M+ + PN +TF A+L ACS+ +VEEGKL F M
Sbjct: 316 WTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSME 375
Query: 378 SDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERG 437
DY + P IEHYGC+VDLL RAGLL EA+ I MP+ P+ IWGA+L ACRI+K++E G
Sbjct: 376 RDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELG 435
Query: 438 YRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDA----RMLREKSEISTATKKIPGCSSI 493
IG I+ +DP H G +V NI++ +W+ A R+++E+ K+PGCS+I
Sbjct: 436 EEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQ-----GVAKVPGCSTI 490
Query: 494 ELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVFGXXXXXXXXXXXXXTALS 553
L GT ++FL GDRSHP+ ++ S M KL+ GYVP +
Sbjct: 491 SLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVH 550
Query: 554 VHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRVIIVRDRTRYHHFK 613
HSEKLAI +GL+ T PGT IRI+KNLRVC+DCH+VTK ISK+Y R I++RDRTR+HHF+
Sbjct: 551 QHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFR 610
Query: 614 DGICSCKDYW 623
DG CSC DYW
Sbjct: 611 DGKCSCGDYW 620
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 496 bits (1278), Expect = e-140, Method: Compositional matrix adjust.
Identities = 253/620 (40%), Positives = 378/620 (60%), Gaps = 23/620 (3%)
Query: 24 VDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVADASL-----SYAHKLFDQIPQPD 78
++ C++I+ + Q HA + + + ++A + L+ A + L YAHK+F+Q+PQ +
Sbjct: 30 INNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRN 89
Query: 79 LFIYNTMIKAHSLS-PSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQ 137
F +NT+I+ S S ++ +F + D + PNR++F AC +QEG+Q
Sbjct: 90 CFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQ 149
Query: 138 VRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAV--------------DKDLY 183
+ A+K G + FV++ L+ MY G ++ R +F + D ++
Sbjct: 150 IHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIV 209
Query: 184 SWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVG 243
WN MI Y+ G+ A+ LFD+M+++ VVSW+T+I+GY G F +A++ F M +
Sbjct: 210 LWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGD 269
Query: 244 PKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESAS 303
+PN T VS L A S L +L+ G+W+H + I++++ L +++IDMY+KCG IE A
Sbjct: 270 IRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAI 329
Query: 304 RVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHG 363
VF E + V W+AMI GFA+HG+ +AI F KM+ V P+ V ++ LL ACSHG
Sbjct: 330 HVF-ERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHG 388
Query: 364 YMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGA 423
+VEEG+ YF MVS G+ P IEHYGCMVDLL R+GLL EAE+ I +MP+ PD IW A
Sbjct: 389 GLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKA 448
Query: 424 VLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTA 483
+L ACR+ ++E G R+ I+ +M P+ G +V L N+Y+S G W++ +R + +
Sbjct: 449 LLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMK-EKD 507
Query: 484 TKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVFGXXXXXXX 543
+K PGCS I+++G ++F+V D SHP+++E+ S L E++ KL++AGY P+
Sbjct: 508 IRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPI-TTQVLLNL 566
Query: 544 XXXXXXTALSVHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRVIIV 603
L HSEK+A AFGL++T+PG PIRIVKNLR+C DCH K ISKVY R I V
Sbjct: 567 EEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITV 626
Query: 604 RDRTRYHHFKDGICSCKDYW 623
RDR R+HHF+DG CSC DYW
Sbjct: 627 RDRKRFHHFQDGSCSCMDYW 646
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 479 bits (1233), Expect = e-135, Method: Compositional matrix adjust.
Identities = 238/571 (41%), Positives = 367/571 (64%), Gaps = 12/571 (2%)
Query: 62 ASLSYAHKLFD-QIPQPDLFIYNTMIKA--HSLSPSSCNDSLMVFRLLTRDSGLSPNRYS 118
A ++YA+ +F + + + F++N +I+A H++S + + V+ L R+ +SP+ ++
Sbjct: 6 AIIAYANPIFHIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVY-LRMRNHRVSPDFHT 64
Query: 119 FVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAV 178
F F + N L + G++ + + GLD + FV +L+ MY G + ++VF+ +
Sbjct: 65 FPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSG 124
Query: 179 DKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHR 238
KDL +WN+++ AY +G + A++LFDEM E++V+SWS +I GYV G + EALD F
Sbjct: 125 SKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFRE 184
Query: 239 MLQVGP-----KPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMY 293
M P +PNE+T + L+AC L AL+QGKW+H++I + ++++ L ++IDMY
Sbjct: 185 MQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMY 244
Query: 294 AKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKV-ENVSPNKVT 352
AKCG +E A RVF +K+ V ++AMI AM+G E ++F +M +N++PN VT
Sbjct: 245 AKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVT 304
Query: 353 FVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSM 412
FV +L AC H ++ EGK YF++M+ ++GI P I+HYGCMVDL R+GL+KEAE I+SM
Sbjct: 305 FVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASM 364
Query: 413 PMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDAR 472
PM PDV IWG++L+ R+ D++ + + E+DP + G +VLL N+Y+ +GRW + +
Sbjct: 365 PMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVK 424
Query: 473 MLREKSEISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYV 532
+R + E+ K+PGCS +E+ G ++F+VGD S +S +Y+ LDE+ +L+ AGYV
Sbjct: 425 CIRHEMEVK-GINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYV 483
Query: 533 PVFGXXXXXXXXXXXXXTALSVHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKF 592
ALS HSEKLAIAF L+ T PGTP+RI+KNLR+C DCH V K
Sbjct: 484 -TDTKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKM 542
Query: 593 ISKVYDRVIIVRDRTRYHHFKDGICSCKDYW 623
ISK++ R I+VRD R+HHF+DG CSC+D+W
Sbjct: 543 ISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 465 bits (1196), Expect = e-131, Method: Compositional matrix adjust.
Identities = 241/610 (39%), Positives = 371/610 (60%), Gaps = 16/610 (2%)
Query: 22 SLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVADAS---LSYAHKLFDQIPQPD 78
+L+D+ + ++++Q HA+L + F+K VA + L YA+++ D+ +P
Sbjct: 11 ALLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPT 70
Query: 79 LFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQE-GEQ 137
LF N+MI+AH SP R+L+ + L P+ Y+ F AC GL ++E G Q
Sbjct: 71 LFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQAC-TGLRMRETGLQ 129
Query: 138 VRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGN 197
V ++ G D++ V LI +Y + G ++ KVF D M+ A G+
Sbjct: 130 VHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGD 189
Query: 198 MSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAA 257
+ A++LF+ M E+D ++W+ +I+GY QVG EAL+ FH M G K N +S L+A
Sbjct: 190 VVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSA 249
Query: 258 CSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWP 317
C+ L ALDQG+W HS+I R +IK+ RL +++D+YAKCG++E A VFW K V+
Sbjct: 250 CTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEK-NVYT 308
Query: 318 WNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMV 377
W++ + G AM+G + +++F MK + V+PN VTFV++L CS V+EG+ +F M
Sbjct: 309 WSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMR 368
Query: 378 SDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERG 437
+++GI P++EHYGC+VDL +RAG L++A +I MPM P A+W ++L+A R+YK++E G
Sbjct: 369 NEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELG 428
Query: 438 YRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNG 497
+ + E++ + G +VLL NIY+ S W++ +R+ S S +K PGCS +E+NG
Sbjct: 429 VLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQ-SMKSKGVRKQPGCSVMEVNG 487
Query: 498 TFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGY----VPVFGXXXXXXXXXXXXXTALS 553
++F VGD+SHP+ ++ + +++ +L++AGY PV AL
Sbjct: 488 EVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVM-----FDIDEEEKEDALC 542
Query: 554 VHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRVIIVRDRTRYHHFK 613
+HSEK AIAFG+++ PIRIVKNLRVC DCHQV+ ISK+++R IIVRDR R+HHFK
Sbjct: 543 LHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFK 602
Query: 614 DGICSCKDYW 623
DG CSC +W
Sbjct: 603 DGHCSCNGFW 612
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 457 bits (1177), Expect = e-129, Method: Compositional matrix adjust.
Identities = 238/628 (37%), Positives = 366/628 (58%), Gaps = 15/628 (2%)
Query: 2 SRFCSTLTKPFHSDHCCRLASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKL--- 58
++ +T T F +LA L+D +S+ ++ Q HA ++ L+ H LKL
Sbjct: 14 NQLSTTATARFRLPPPEKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRA 73
Query: 59 -VADASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRY 117
+ + ++ LF Q PDLF++ I S++ L+ +LL+ S ++PN +
Sbjct: 74 YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLS--SEINPNEF 131
Query: 118 SFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWA 177
+F +C S + G+ + +H +K GL + +V L+ +Y K G V +KVF+
Sbjct: 132 TFSSLLKSC----STKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRM 187
Query: 178 VDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFH 237
++ L S MI Y GN+ A+ LFD M E+D+VSW+ +I GY Q G +AL F
Sbjct: 188 PERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQ 247
Query: 238 RMLQVG-PKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKC 296
++L G PKP+E T V+AL+ACS + AL+ G+WIH F+ I++N ++ +IDMY+KC
Sbjct: 248 KLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKC 307
Query: 297 GEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMK-VENVSPNKVTFVA 355
G +E A VF + ++ + WNAMI G+AMHG +A+++F +M+ + + P +TF+
Sbjct: 308 GSLEEAVLVFND-TPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIG 366
Query: 356 LLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMA 415
L AC+H +V EG F M +YGI P+IEHYGC+V LL RAG LK A + I +M M
Sbjct: 367 TLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMD 426
Query: 416 PDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLR 475
D +W +VL +C+++ D G I + ++ + G +VLL NIY+S G + +R
Sbjct: 427 ADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVR 486
Query: 476 EKSEISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVF 535
+ K+ PG S+IE+ ++F GDR H +S+E+Y+ L +++ ++K GYVP
Sbjct: 487 NLMKEKGIVKE-PGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNT 545
Query: 536 GXXXXXXXXXXXXXTALSVHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISK 595
+ L VHSE+LAIA+GL++T PG+P++I KNLRVC DCH VTK ISK
Sbjct: 546 NTVLQDLEETEKEQS-LQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISK 604
Query: 596 VYDRVIIVRDRTRYHHFKDGICSCKDYW 623
+ R I++RDR R+HHF DG CSC D+W
Sbjct: 605 ITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 452 bits (1164), Expect = e-127, Method: Compositional matrix adjust.
Identities = 254/627 (40%), Positives = 355/627 (56%), Gaps = 52/627 (8%)
Query: 15 DHCCRLASLVDTCKSIQQIKQTHAQLVTTALISHHVSA---NKFLKLVADAS-LSYAHKL 70
+H R+ SL +TC + Q+KQ HA + T + K L+L + S ++YA ++
Sbjct: 46 NHHQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRV 105
Query: 71 FDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGL 130
FD I F++NT+I+A + S ++ M++R + SP++++F F AC
Sbjct: 106 FDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIF 165
Query: 131 SVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIA 190
EG+QV VK G +V+V N LI +YG G ++ RKVF+ ++ L SWN+MI
Sbjct: 166 GFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMID 225
Query: 191 AYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYT 250
A V G A +LF EMQ +P+ YT
Sbjct: 226 ALVRFGEYDSALQLFREMQRSF--------------------------------EPDGYT 253
Query: 251 FVSALAACSNLVALDQGKWIHSFIGRG---EIKMNERLLASIIDMYAKCGEIESASRVFW 307
S L+AC+ L +L G W H+F+ R ++ M+ + S+I+MY KCG + A +VF
Sbjct: 254 MQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVF- 312
Query: 308 EHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKM--KVENVSPNKVTFVALLNACSHGYM 365
+ KR + WNAMI GFA HG+ EA+ F +M K ENV PN VTFV LL AC+H
Sbjct: 313 QGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGF 372
Query: 366 VEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVL 425
V +G+ YF +MV DY I P +EHYGC+VDL++RAG + EA DM+ SMPM PD IW ++L
Sbjct: 373 VNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLL 432
Query: 426 NA-CRIYKDMERGYRIGRII-------KEMDPNHVGCHVLLGNIYSSSGRWNDARMLREK 477
+A C+ +E I R I + + N G +VLL +Y+S+ RWND ++R K
Sbjct: 433 DACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVR-K 491
Query: 478 SEISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVFGX 537
+K PGCSSIE+NG ++F GD SHPQ++++Y L + +L+ GY+P
Sbjct: 492 LMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQ 551
Query: 538 XXXXXXXXXXXXT-ALSVHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKV 596
+L +HSE+LAIAFGL+N P TPIRI KNLRVC DCH+VTK ISKV
Sbjct: 552 APLVDATNDGSKEYSLRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKV 611
Query: 597 YDRVIIVRDRTRYHHFKDGICSCKDYW 623
++ IIVRDR R+HHFKDG CSC DYW
Sbjct: 612 FNTEIIVRDRVRFHHFKDGSCSCLDYW 638
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 450 bits (1157), Expect = e-126, Method: Compositional matrix adjust.
Identities = 232/589 (39%), Positives = 357/589 (60%), Gaps = 6/589 (1%)
Query: 37 HAQLVTTALISHHVSANKFLK-LVADASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSS 95
H V +A+ S AN + + L A K+F I + D+ +N+MI + S
Sbjct: 154 HGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGF-VQKGS 212
Query: 96 CNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVN 155
+ +L +F+ + + + + + V AC +++ G QV S+ + ++ N+ + N
Sbjct: 213 PDKALELFKKMESED-VKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLAN 271
Query: 156 ALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVS 215
A++ MY K G +E +++F+ +KD +W TM+ Y S + A+E+ + M ++D+V+
Sbjct: 272 AMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVA 331
Query: 216 WSTIIAGYVQVGCFMEALDFFHRM-LQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFI 274
W+ +I+ Y Q G EAL FH + LQ K N+ T VS L+AC+ + AL+ G+WIHS+I
Sbjct: 332 WNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYI 391
Query: 275 GRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEA 334
+ I+MN + +++I MY+KCG++E + VF KR V+ W+AMIGG AMHG +EA
Sbjct: 392 KKHGIRMNFHVTSALIHMYSKCGDLEKSREVF-NSVEKRDVFVWSAMIGGLAMHGCGNEA 450
Query: 335 IKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVD 394
+ +F KM+ NV PN VTF + ACSH +V+E + F M S+YGI+PE +HY C+VD
Sbjct: 451 VDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVD 510
Query: 395 LLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGC 454
+L R+G L++A I +MP+ P ++WGA+L AC+I+ ++ + E++P + G
Sbjct: 511 VLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGA 570
Query: 455 HVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSRE 514
HVLL NIY+ G+W + LR+ + T KK PGCSSIE++G ++FL GD +HP S +
Sbjct: 571 HVLLSNIYAKLGKWENVSELRKHMRV-TGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEK 629
Query: 515 LYSFLDEMTTKLKIAGYVPVFGXXXXXXXXXXXXXTALSVHSEKLAIAFGLLNTAPGTPI 574
+Y L E+ KLK GY P +L++HSEKLAI +GL++T I
Sbjct: 630 VYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVI 689
Query: 575 RIVKNLRVCRDCHQVTKFISKVYDRVIIVRDRTRYHHFKDGICSCKDYW 623
R++KNLRVC DCH V K IS++YDR IIVRDR R+HHF++G CSC D+W
Sbjct: 690 RVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 134/454 (29%), Positives = 229/454 (50%), Gaps = 68/454 (14%)
Query: 6 STLTKPFHSDHCCRLASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVAD---A 62
S +P ++ R SL++ C S++Q+KQTH ++ T S SA+K + A A
Sbjct: 19 SNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFA 78
Query: 63 SLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFT 122
SL YA K+FD+IP+P+ F +NT+I+A++ P S+ F + +S PN+Y+F F
Sbjct: 79 SLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPV-LSIWAFLDMVSESQCYPNKYTFPFL 137
Query: 123 FGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDL 182
A S+ G+ + AVK + S+VFV N+LI Y G ++ KVF +KD+
Sbjct: 138 IKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDV 197
Query: 183 YSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQV 242
SWN+MI +V G+ +A ELF +M+ +DV
Sbjct: 198 VSWNSMINGFVQKGSPDKALELFKKMESEDV----------------------------- 228
Query: 243 GPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESA 302
K + T V L+AC+ + L+ G+ + S+I + +N L +++DMY KCG IE A
Sbjct: 229 --KASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDA 286
Query: 303 SRVF----------W-----------EHNAKRKVW---------PWNAMIGGFAMHGKPS 332
R+F W ++ A R+V WNA+I + +GKP+
Sbjct: 287 KRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPN 346
Query: 333 EAIKVFQKMKVE-NVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGC 391
EA+ VF +++++ N+ N++T V+ L+AC+ +E G+ + + +GI
Sbjct: 347 EALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGR-WIHSYIKKHGIRMNFHVTSA 405
Query: 392 MVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVL 425
++ + S+ G L+++ ++ +S+ DV +W A++
Sbjct: 406 LIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMI 438
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 148/294 (50%), Gaps = 9/294 (3%)
Query: 181 DLYSWNTM--IAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQ-VGCFMEALDFFH 237
D YS + + +AA ++ A+++FDE+ + + +W+T+I Y + F
Sbjct: 61 DPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLD 120
Query: 238 RMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCG 297
+ + PN+YTF + A + + +L G+ +H + + + + S+I Y CG
Sbjct: 121 MVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCG 180
Query: 298 EIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALL 357
+++SA +VF K V WN+MI GF G P +A+++F+KM+ E+V + VT V +L
Sbjct: 181 DLDSACKVFTTIKEK-DVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVL 239
Query: 358 NACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPD 417
+AC+ +E G+ + + + + M+D+ ++ G +++A+ + +M +
Sbjct: 240 SACAKIRNLEFGRQVCSY-IEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDN 298
Query: 418 VAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDA 471
V W +L+ I +D E + + + D V + L+ + Y +G+ N+A
Sbjct: 299 VT-WTTMLDGYAISEDYEAAREVLNSMPQKDI--VAWNALI-SAYEQNGKPNEA 348
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 441 bits (1135), Expect = e-124, Method: Compositional matrix adjust.
Identities = 233/611 (38%), Positives = 358/611 (58%), Gaps = 14/611 (2%)
Query: 22 SLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVADAS--------LSYAHKLFDQ 73
+L+ +C S +K H L+ T LIS A++ L L D S L YA+ +F Q
Sbjct: 17 ALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQ 76
Query: 74 IPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQ 133
I P+LF++N +I+ S ++L S + P+ +F F A V
Sbjct: 77 IQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQML--KSRIWPDNITFPFLIKASSEMECVL 134
Query: 134 EGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYV 193
GEQ S V+ G ++V+V N+L+ MY G + ++F +D+ SW +M+A Y
Sbjct: 135 VGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYC 194
Query: 194 GSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVS 253
G + A+E+FDEM +++ +WS +I GY + CF +A+D F M + G NE VS
Sbjct: 195 KCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVS 254
Query: 254 ALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKR 313
+++C++L AL+ G+ + ++ + + +N L +++DM+ +CG+IE A VF E +
Sbjct: 255 VISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVF-EGLPET 313
Query: 314 KVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYF 373
W+++I G A+HG +A+ F +M P VTF A+L+ACSHG +VE+G +
Sbjct: 314 DSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIY 373
Query: 374 RLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKD 433
M D+GI P +EHYGC+VD+L RAG L EAE+ I M + P+ I GA+L AC+IYK+
Sbjct: 374 ENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKN 433
Query: 434 MERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSI 493
E R+G ++ ++ P H G +VLL NIY+ +G+W+ LR+ + KK PG S I
Sbjct: 434 TEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMK-EKLVKKPPGWSLI 492
Query: 494 ELNGTFYQFLVG-DRSHPQSRELYSFLDEMTTKLKIAGYVPVFGXXXXXXXXXXXXXTAL 552
E++G +F +G D+ HP+ ++ +E+ K+++ GY G +++
Sbjct: 493 EIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTG-DAFFDVDEEEKESSI 551
Query: 553 SVHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRVIIVRDRTRYHHF 612
+HSEKLAIA+G++ T PGT IRIVKNLRVC DCH VTK IS+VY R +IVRDR R+HHF
Sbjct: 552 HMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHF 611
Query: 613 KDGICSCKDYW 623
++G+CSC+DYW
Sbjct: 612 RNGVCSCRDYW 622
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 437 bits (1124), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/570 (39%), Positives = 341/570 (59%), Gaps = 19/570 (3%)
Query: 64 LSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLM--VFRLLT--RDSGLSPNRYSF 119
++YA +FD++ D+ +NTMI+ + C L+ F+L +DS + P+
Sbjct: 162 INYARNVFDEMSHRDVVTWNTMIERY------CRFGLVDEAFKLFEEMKDSNVMPDEMIL 215
Query: 120 VFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVD 179
ACG +++ + ++ + + ++ AL+ MY G ++ R+ F
Sbjct: 216 CNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSV 275
Query: 180 KDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRM 239
++L+ M++ Y G + A+ +FD+ +++D+V W+T+I+ YV+ EAL F M
Sbjct: 276 RNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEM 335
Query: 240 LQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEI 299
G KP+ + S ++AC+NL LD+ KW+HS I ++ + ++I+MYAKCG +
Sbjct: 336 CCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGL 395
Query: 300 ESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNA 359
++ VF E +R V W++MI +MHG+ S+A+ +F +MK ENV PN+VTFV +L
Sbjct: 396 DATRDVF-EKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYG 454
Query: 360 CSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVA 419
CSH +VEEGK F M +Y I P++EHYGCMVDL RA LL+EA ++I SMP+A +V
Sbjct: 455 CSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVV 514
Query: 420 IWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSE 479
IWG++++ACRI+ ++E G + I E++P+H G VL+ NIY+ RW D R +R E
Sbjct: 515 IWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVME 574
Query: 480 ISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVFGXXX 539
K+ G S I+ NG ++FL+GD+ H QS E+Y+ LDE+ +KLK+AGYVP G
Sbjct: 575 EKNVFKE-KGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVL 633
Query: 540 XXXXXXXXXXTALSVHSEKLAIAFGLLNTAPGTP------IRIVKNLRVCRDCHQVTKFI 593
L HSEKLA+ FGL+N IRIVKNLRVC DCH K +
Sbjct: 634 VDVEEEEKKDLVLW-HSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLV 692
Query: 594 SKVYDRVIIVRDRTRYHHFKDGICSCKDYW 623
SKVY+R IIVRDRTR+H +K+G+CSC+DYW
Sbjct: 693 SKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 113/495 (22%), Positives = 225/495 (45%), Gaps = 76/495 (15%)
Query: 7 TLTKPFHSDHCCRLASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVADASLS- 65
TL P S + + CKS+ IKQ HA ++ T +I+H +++ F V+ +S++
Sbjct: 2 TLPPPIASTAANTILEKLSFCKSLNHIKQLHAHILRT-VINHKLNSFLFNLSVSSSSINL 60
Query: 66 -YAHKLFDQIPQP-DLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTF 123
YA +F IP P + ++N ++ LS SS + ++F R G +++SF+
Sbjct: 61 SYALNVFSSIPSPPESIVFNPFLR--DLSRSSEPRATILFYQRIRHVGGRLDQFSFLPIL 118
Query: 124 GACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLY 183
A ++ EG ++ A K+ + FV + MY G + Y R VF+ +D+
Sbjct: 119 KAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVV 178
Query: 184 SWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVG 243
+WNTMI Y G + +A +LF+EM++ +V+
Sbjct: 179 TWNTMIERYCRFGLVDEAFKLFEEMKDSNVM----------------------------- 209
Query: 244 PKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYA--------- 294
P+E + ++AC + + I+ F+ +++M+ LL +++ MYA
Sbjct: 210 --PDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAR 267
Query: 295 ----------------------KCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPS 332
KCG ++ A +V ++ K+ + W MI + P
Sbjct: 268 EFFRKMSVRNLFVSTAMVSGYSKCGRLDDA-QVIFDQTEKKDLVCWTTMISAYVESDYPQ 326
Query: 333 EAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCM 392
EA++VF++M + P+ V+ ++++AC++ ++++ K + + G+ E+ +
Sbjct: 327 EALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAK-WVHSCIHVNGLESELSINNAL 385
Query: 393 VDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRI-GRIIKE-MDPN 450
+++ ++ G L D+ MP +V W +++NA ++ + + R+ +E ++PN
Sbjct: 386 INMYAKCGGLDATRDVFEKMPRR-NVVSWSSMINALSMHGEASDALSLFARMKQENVEPN 444
Query: 451 HVGCHVLLGNIYSSS 465
V +G +Y S
Sbjct: 445 EV---TFVGVLYGCS 456
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 431 bits (1108), Expect = e-121, Method: Compositional matrix adjust.
Identities = 239/625 (38%), Positives = 363/625 (58%), Gaps = 23/625 (3%)
Query: 6 STLTKPFHSDHCCRLASLVDTCKSIQQIKQTHAQLVTTAL-ISHHVSANKFLKLVADASL 64
++ T PF C + K+ ++ +Q H ++ + +V + V + L
Sbjct: 133 NSYTFPFVLKSCAK-------SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRL 185
Query: 65 SYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFG 124
AHK+FD+ P D+ Y +IK ++ S ++ +F + +S N + + +
Sbjct: 186 EDAHKVFDKSPHRDVVSYTALIKGYA-SRGYIENAQKLFDEIPVKDVVSWN--AMISGYA 242
Query: 125 ACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVD----K 180
GN +E ++ +K + + + ++ + G +E GR+V W D
Sbjct: 243 ETGN---YKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGS 299
Query: 181 DLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRML 240
+L N +I Y G + A LF+ + +DV+SW+T+I GY + + EAL F ML
Sbjct: 300 NLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEML 359
Query: 241 QVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGR--GEIKMNERLLASIIDMYAKCGE 298
+ G PN+ T +S L AC++L A+D G+WIH +I + + L S+IDMYAKCG+
Sbjct: 360 RSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGD 419
Query: 299 IESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLN 358
IE+A +VF + + WNAMI GFAMHG+ + +F +M+ + P+ +TFV LL+
Sbjct: 420 IEAAHQVF-NSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLS 478
Query: 359 ACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDV 418
ACSH M++ G+ FR M DY + P++EHYGCM+DLL +GL KEAE+MI+ M M PD
Sbjct: 479 ACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDG 538
Query: 419 AIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKS 478
IW ++L AC+++ ++E G + +++P + G +VLL NIY+S+GRWN+ R
Sbjct: 539 VIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALL 598
Query: 479 EISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVFGXX 538
KK+PGCSSIE++ ++F++GD+ HP++RE+Y L+EM L+ AG+VP
Sbjct: 599 N-DKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPD-TSE 656
Query: 539 XXXXXXXXXXXTALSVHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYD 598
AL HSEKLAIAFGL++T PGT + IVKNLRVCR+CH+ TK ISK+Y
Sbjct: 657 VLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYK 716
Query: 599 RVIIVRDRTRYHHFKDGICSCKDYW 623
R II RDRTR+HHF+DG+CSC DYW
Sbjct: 717 REIIARDRTRFHHFRDGVCSCNDYW 741
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 122/409 (29%), Positives = 232/409 (56%), Gaps = 9/409 (2%)
Query: 22 SLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVADA----SLSYAHKLFDQIPQP 77
SL+ CK++Q ++ HAQ++ L + + + +K ++ + L YA +F I +P
Sbjct: 38 SLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEP 97
Query: 78 DLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQ 137
+L I+NTM + H+LS S + + GL PN Y+F F +C + +EG+Q
Sbjct: 98 NLLIWNTMFRGHALSSDPV--SALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQ 155
Query: 138 VRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGN 197
+ H +K+G D +++V +LI MY + G +E KVF+ + +D+ S+ +I Y G
Sbjct: 156 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGY 215
Query: 198 MSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAA 257
+ A++LFDE+ +DVVSW+ +I+GY + G + EAL+ F M++ +P+E T V+ ++A
Sbjct: 216 IENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA 275
Query: 258 CSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWP 317
C+ +++ G+ +H +I N +++ ++ID+Y+KCGE+E+A +F E + V
Sbjct: 276 CAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLF-ERLPYKDVIS 334
Query: 318 WNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGK-LYFRLM 376
WN +IGG+ EA+ +FQ+M +PN VT +++L AC+H ++ G+ ++ +
Sbjct: 335 WNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYID 394
Query: 377 VSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVL 425
G+ ++D+ ++ G ++ A + +S+ + ++ W A++
Sbjct: 395 KRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMI 442
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 427 bits (1099), Expect = e-119, Method: Compositional matrix adjust.
Identities = 243/643 (37%), Positives = 353/643 (54%), Gaps = 41/643 (6%)
Query: 16 HCCRLASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVA---DASLSYAHKLFD 72
HC SL+++CK+++ + Q H + + + K + A +L YA +L
Sbjct: 7 HCL---SLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLL 63
Query: 73 QIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSV 132
P+PD F++NT+++ +S S N S+ VF + R + P+ +SF F A N S+
Sbjct: 64 CFPEPDAFMFNTLVRGYSESDEPHN-SVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSL 122
Query: 133 QEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFE---------WAV----- 178
+ G Q+ A+K GL+S++FV LIGMYG G VE+ RKVF+ W
Sbjct: 123 RTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITAC 182
Query: 179 -------------DKDLY----SWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIA 221
DK L SWN M+A Y+ +G + AK +F EM +D VSWST+I
Sbjct: 183 FRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIV 242
Query: 222 GYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKM 281
G G F E+ +F + + G PNE + L+ACS + + GK +H F+ +
Sbjct: 243 GIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSW 302
Query: 282 NERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKM 341
+ ++IDMY++CG + A VF KR + W +MI G AMHG+ EA+++F +M
Sbjct: 303 IVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEM 362
Query: 342 KVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGL 401
V+P+ ++F++LL+ACSH ++EEG+ YF M Y I PEIEHYGCMVDL R+G
Sbjct: 363 TAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGK 422
Query: 402 LKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNI 461
L++A D I MP+ P +W +L AC + ++E ++ + + E+DPN+ G VLL N
Sbjct: 423 LQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNA 482
Query: 462 YSSSGRWNDARMLREKSEISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDE 521
Y+++G+W D +R KS I KK S +E+ T Y+F G++ E + L E
Sbjct: 483 YATAGKWKDVASIR-KSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKE 541
Query: 522 MTTKLKI-AGYVPVFGXXXXXXXXXXXXXTALSVHSEKLAIAFGLLNTAPGTPIRIVKNL 580
+ +LK AGY P +S HSEKLA+AF L + G IRIVKNL
Sbjct: 542 IILRLKDEAGYTPEVA-SALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNL 600
Query: 581 RVCRDCHQVTKFISKVYDRVIIVRDRTRYHHFKDGICSCKDYW 623
R+CRDCH V K SKVY I+VRDR R+H FKDG CSC+DYW
Sbjct: 601 RICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 420 bits (1079), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/610 (36%), Positives = 343/610 (56%), Gaps = 50/610 (8%)
Query: 23 LVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLV-------ADASLSYAHKLFDQIP 75
L+ C S++++ Q A A+ SH + KL+ ++S+SYA LF+ +
Sbjct: 35 LISKCNSLRELMQIQAY----AIKSHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMS 90
Query: 76 QPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTR--DSGLSPNRYSFVFTFGACGNGLSVQ 133
+PD+ I+N+M + +S + L VF L + G+ P+ Y+F AC +++
Sbjct: 91 EPDIVIFNSMARGYS----RFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALE 146
Query: 134 EGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYV 193
EG Q+ ++K+GLD NV+V T+I Y
Sbjct: 147 EGRQLHCLSMKLGLDDNVYVCP-------------------------------TLINMYT 175
Query: 194 GSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVS 253
++ A+ +FD + E VV ++ +I GY + EAL F M KPNE T +S
Sbjct: 176 ECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLS 235
Query: 254 ALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKR 313
L++C+ L +LD GKWIH + + ++ ++IDM+AKCG ++ A +F E +
Sbjct: 236 VLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIF-EKMRYK 294
Query: 314 KVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYF 373
W+AMI +A HGK +++ +F++M+ ENV P+++TF+ LLNACSH VEEG+ YF
Sbjct: 295 DTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYF 354
Query: 374 RLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKD 433
MVS +GI+P I+HYG MVDLLSRAG L++A + I +P++P +W +L AC + +
Sbjct: 355 SQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNN 414
Query: 434 MERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSI 493
++ ++ I E+D +H G +V+L N+Y+ + +W LR+ + A K+PGCSSI
Sbjct: 415 LDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAV-KVPGCSSI 473
Query: 494 ELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVFGXXXXXXXXXXXXXTALS 553
E+N ++F GD + +L+ LDEM +LK++GYVP L
Sbjct: 474 EVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLR 533
Query: 554 VHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRVIIVRDRTRYHHFK 613
HSEKLAI FGLLNT PGT IR+VKNLRVCRDCH K IS ++ R +++RD R+HHF+
Sbjct: 534 YHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFE 593
Query: 614 DGICSCKDYW 623
DG CSC D+W
Sbjct: 594 DGKCSCGDFW 603
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 143/329 (43%), Gaps = 46/329 (13%)
Query: 22 SLVDTC---KSIQQIKQTHAQLVTTALISHHVSANKFLKLVADAS-LSYAHKLFDQIPQP 77
SL+ C K++++ +Q H + L + + + + + A +FD+I +P
Sbjct: 134 SLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEP 193
Query: 78 DLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQ 137
+ YN MI ++ + N++L +FR + + L PN + + +C S+ G+
Sbjct: 194 CVVCYNAMITGYA-RRNRPNEALSLFREM-QGKYLKPNEITLLSVLSSCALLGSLDLGKW 251
Query: 138 VRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGN 197
+ +A K V V ALI M+ K G ++ +FE KD +W+ MI AY G
Sbjct: 252 IHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGK 311
Query: 198 MSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAA 257
++ +F+ M+ ++V +P+E TF+ L A
Sbjct: 312 AEKSMLMFERMRSENV-------------------------------QPDEITFLGLLNA 340
Query: 258 CSNLVALDQG-KWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVW 316
CS+ +++G K+ + + I + + S++D+ ++ G +E A +E K +
Sbjct: 341 CSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDA----YEFIDKLPIS 396
Query: 317 P----WNAMIGGFAMHGKPSEAIKVFQKM 341
P W ++ + H A KV +++
Sbjct: 397 PTPMLWRILLAACSSHNNLDLAEKVSERI 425
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 417 bits (1071), Expect = e-116, Method: Compositional matrix adjust.
Identities = 224/565 (39%), Positives = 332/565 (58%), Gaps = 7/565 (1%)
Query: 62 ASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVF 121
+ A F+Q+ + D+ +N+MI + +L +F + RDS LSP+R++
Sbjct: 226 GQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLR-ALDIFSKMLRDSLLSPDRFTLAS 284
Query: 122 TFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKD 181
AC N + G+Q+ SH V G D + V+NALI MY + G VE R++ E KD
Sbjct: 285 VLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKD 344
Query: 182 LY--SWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRM 239
L + ++ Y+ G+M+QAK +F ++++DVV+W+ +I GY Q G + EA++ F M
Sbjct: 345 LKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSM 404
Query: 240 LQVGPKPNEYTFVSALAACSNLVALDQGKWIH-SFIGRGEIKMNERLLASIIDMYAKCGE 298
+ G +PN YT + L+ S+L +L GK IH S + GEI + + ++I MYAK G
Sbjct: 405 VGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEI-YSVSVSNALITMYAKAGN 463
Query: 299 IESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLN 358
I SASR F +R W +MI A HG EA+++F+ M +E + P+ +T+V + +
Sbjct: 464 ITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFS 523
Query: 359 ACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDV 418
AC+H +V +G+ YF +M IIP + HY CMVDL RAGLL+EA++ I MP+ PDV
Sbjct: 524 ACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDV 583
Query: 419 AIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKS 478
WG++L+ACR++K+++ G + ++P + G + L N+YS+ G+W +A +R KS
Sbjct: 584 VTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIR-KS 642
Query: 479 EISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVFGXX 538
KK G S IE+ + F V D +HP+ E+Y + ++ ++K GYVP
Sbjct: 643 MKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASV 702
Query: 539 XXXXXXXXXXXTALSVHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYD 598
L HSEKLAIAFGL++T T +RI+KNLRVC DCH KFISK+
Sbjct: 703 LHDLEEEVKEQI-LRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVG 761
Query: 599 RVIIVRDRTRYHHFKDGICSCKDYW 623
R IIVRD TR+HHFKDG CSC+DYW
Sbjct: 762 REIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 133/484 (27%), Positives = 223/484 (46%), Gaps = 77/484 (15%)
Query: 69 KLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGN 128
+ FDQ+PQ D + TMI + + + ++ V + ++ G+ P +++ +
Sbjct: 101 EFFDQLPQRDSVSWTTMIVGYK-NIGQYHKAIRVMGDMVKE-GIEPTQFTLTNVLASVAA 158
Query: 129 GLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTM 188
++ G++V S VK+GL NV V N+L+ MY K G + VF+ V +D+ SWN M
Sbjct: 159 TRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAM 218
Query: 189 IAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVG-PKPN 247
IA ++ G M A F++M E+D+V+W+++I+G+ Q G + ALD F +ML+ P+
Sbjct: 219 IALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPD 278
Query: 248 EYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFW 307
+T S L+AC+NL L GK IHS I ++ +L ++I MY++CG +E+A R+
Sbjct: 279 RFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIE 338
Query: 308 EHNAK--------------------------------RKVWPWNAMIGGFAMHGKPSEAI 335
+ K R V W AMI G+ HG EAI
Sbjct: 339 QRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAI 398
Query: 336 KVFQKMKVENVSPNKVTFVALLNACS-----------HGYMVEEGKLY-------FRLMV 377
+F+ M PN T A+L+ S HG V+ G++Y M
Sbjct: 399 NLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMY 458
Query: 378 SDYGIIPEIEH-------------YGCMVDLLSRAGLLKEAEDMISSMPMA---PDVAIW 421
+ G I + M+ L++ G +EA ++ +M M PD +
Sbjct: 459 AKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITY 518
Query: 422 GAVLNACRIYKDMERGYRIGRIIKEMDP-----NHVGCHVLLGNIYSSSGRWNDARMLRE 476
V +AC + +G + ++K++D +H C V +++ +G +A+ E
Sbjct: 519 VGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMV---DLFGRAGLLQEAQEFIE 575
Query: 477 KSEI 480
K I
Sbjct: 576 KMPI 579
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 177/348 (50%), Gaps = 37/348 (10%)
Query: 135 GEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVG 194
+ V +K GL +V+++N L+ +Y K G + RK+F+ + +SWNT+++AY
Sbjct: 33 AQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSK 92
Query: 195 SGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSA 254
G+M E FD++ ++D VSW+T+I GY +G + +A+ M++ G +P ++T +
Sbjct: 93 RGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNV 152
Query: 255 LAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVF-------- 306
LA+ + ++ GK +HSFI + ++ N + S+++MYAKCG+ A VF
Sbjct: 153 LASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDI 212
Query: 307 ----------------------WEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVE 344
+E A+R + WN+MI GF G A+ +F KM +
Sbjct: 213 SSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRD 272
Query: 345 N-VSPNKVTFVALLNACSHGYMVEEGK-LYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLL 402
+ +SP++ T ++L+AC++ + GK ++ ++ + + I + ++ + SR G +
Sbjct: 273 SLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIV--LNALISMYSRCGGV 330
Query: 403 KEAEDMISSMPMAPDVAIWG--AVLNACRIYKDMERGYRIGRIIKEMD 448
+ A +I D+ I G A+L+ DM + I +K+ D
Sbjct: 331 ETARRLIEQRG-TKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRD 377
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 410 bits (1055), Expect = e-114, Method: Compositional matrix adjust.
Identities = 229/647 (35%), Positives = 346/647 (53%), Gaps = 48/647 (7%)
Query: 20 LASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIPQPD 78
L ++DT I+ ++ H++++ L + K ++ A ++ A K+FD+IP+ +
Sbjct: 45 LGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERN 104
Query: 79 LFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQV 138
+ I N MI+++ ++ + + VF + + P+ Y+F AC ++ G ++
Sbjct: 105 VIIINVMIRSY-VNNGFYGEGVKVFGTMC-GCNVRPDHYTFPCVLKACSCSGTIVIGRKI 162
Query: 139 RSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYV----- 193
A KVGL S +FV N L+ MYGK G + R V + +D+ SWN+++ Y
Sbjct: 163 HGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRF 222
Query: 194 -----------------GSGNMSQ---------------AKELFDEMQEQDVVSWSTIIA 221
+G M+ K++F +M ++ +VSW+ +I
Sbjct: 223 DDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIG 282
Query: 222 GYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKM 281
Y++ +EA++ + RM G +P+ + S L AC + AL GK IH +I R ++
Sbjct: 283 VYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIP 342
Query: 282 NERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKM 341
N L ++IDMYAKCG +E A VF E+ R V W AMI + G+ +A+ +F K+
Sbjct: 343 NLLLENALIDMYAKCGCLEKARDVF-ENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKL 401
Query: 342 KVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGL 401
+ + P+ + FV L ACSH ++EEG+ F+LM Y I P +EH CMVDLL RAG
Sbjct: 402 QDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGK 461
Query: 402 LKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNI 461
+KEA I M M P+ +WGA+L ACR++ D + G + ++ P G +VLL NI
Sbjct: 462 VKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNI 521
Query: 462 YSSSGRWNDARMLREKSEISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDE 521
Y+ +GRW + +R + S KK PG S++E+N + FLVGDRSHPQS E+Y LD
Sbjct: 522 YAKAGRWEEVTNIRNIMK-SKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDV 580
Query: 522 MTTKLKIAGYVPVFGXXXXXXXXXXXXXTALSVHSEKLAIAFGLLNTA-----PGTPIRI 576
+ K+K GYVP T L+VHSEKLAI F L+NT IRI
Sbjct: 581 LVKKMKELGYVP-DSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRI 639
Query: 577 VKNLRVCRDCHQVTKFISKVYDRVIIVRDRTRYHHFKDGICSCKDYW 623
KNLR+C DCH K IS++ R II+RD R+H F+ G+CSC DYW
Sbjct: 640 TKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 410 bits (1053), Expect = e-114, Method: Compositional matrix adjust.
Identities = 237/633 (37%), Positives = 361/633 (57%), Gaps = 60/633 (9%)
Query: 11 PFHSDHCCRLASLVDTC---------KSIQQIKQTHAQLVTTALISHHVSANKFL----- 56
PF S+ L +V+ C SI +++Q HA + + K L
Sbjct: 3 PF-SETSVLLLPMVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLV 61
Query: 57 KLVADASLSYAHKLFDQIPQP-DLFIYNTMIKAHSLSPSSCNDSLMVFRLL--TRDSGL- 112
L + +SYAHK+F +I +P ++FI+NT+I+ ++ +S+ F L R SGL
Sbjct: 62 SLPSPPPMSYAHKVFSKIEKPINVFIWNTLIRGYA----EIGNSISAFSLYREMRVSGLV 117
Query: 113 SPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRK 172
P+ +++ F A V+ GE + S ++ G S ++V N+L+ +Y
Sbjct: 118 EPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYA---------- 167
Query: 173 VFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEA 232
G+++ A ++FD+M E+D+V+W+++I G+ + G EA
Sbjct: 168 ---------------------NCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEA 206
Query: 233 LDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDM 292
L + M G KP+ +T VS L+AC+ + AL GK +H ++ + + N ++D+
Sbjct: 207 LALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDL 266
Query: 293 YAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMK-VENVSPNKV 351
YA+CG +E A +F E K V W ++I G A++G EAI++F+ M+ E + P ++
Sbjct: 267 YARCGRVEEAKTLFDEMVDKNSV-SWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEI 325
Query: 352 TFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISS 411
TFV +L ACSH MV+EG YFR M +Y I P IEH+GCMVDLL+RAG +K+A + I S
Sbjct: 326 TFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKS 385
Query: 412 MPMAPDVAIWGAVLNACRIYKDMERGYRIGRI-IKEMDPNHVGCHVLLGNIYSSSGRWND 470
MPM P+V IW +L AC ++ D + RI I +++PNH G +VLL N+Y+S RW+D
Sbjct: 386 MPMQPNVVIWRTLLGACTVHGDSDLA-EFARIQILQLEPNHSGDYVLLSNMYASEQRWSD 444
Query: 471 ARMLREKSEISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAG 530
+ +R K + KK+PG S +E+ ++FL+GD+SHPQS +Y+ L EMT +L+ G
Sbjct: 445 VQKIR-KQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEG 503
Query: 531 YVPVFGXXXXXXXXXXXXXTALSVHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVT 590
YVP A+ HSEK+AIAF L++T +PI +VKNLRVC DCH
Sbjct: 504 YVPQISNVYVDVEEEEKE-NAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAI 562
Query: 591 KFISKVYDRVIIVRDRTRYHHFKDGICSCKDYW 623
K +SKVY+R I+VRDR+R+HHFK+G CSC+DYW
Sbjct: 563 KLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 406 bits (1044), Expect = e-113, Method: Compositional matrix adjust.
Identities = 231/604 (38%), Positives = 346/604 (57%), Gaps = 20/604 (3%)
Query: 34 KQTHAQLVTTALIS---HHVSANKFLKLVADASLSYAHKLFDQIP--QPDLFIYNTMIKA 88
K+ HA L T+ L ++S F + + A KLFD+IP + D + T++ +
Sbjct: 26 KELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSS 85
Query: 89 HSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLD 148
S N S+ +F + R + + S V FG C + +Q AVK+G+
Sbjct: 86 FSRYGLLVN-SMKLFVEMRRKR-VEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVL 143
Query: 149 SNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEM 208
++V V NAL+ MYGK GLV +++FE +K + SW ++ V + + +E+F EM
Sbjct: 144 TSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEM 203
Query: 209 QEQDVVSWSTIIAGYVQVGCFMEALDFFHRML-QVGPKPNEYTFVSALAACSNLVALDQG 267
E++ V+W+ ++AGY+ G E L+ M+ + G N T S L+AC+ L G
Sbjct: 204 PERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVG 263
Query: 268 KWIHSFIGRGEIKMNER-------LLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNA 320
+W+H + + E+ M E + +++DMYAKCG I+S+ VF KR V WNA
Sbjct: 264 RWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVF-RLMRKRNVVTWNA 322
Query: 321 MIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDY 380
+ G AMHGK I +F +M + V P+ +TF A+L+ACSH +V+EG F + Y
Sbjct: 323 LFSGLAMHGKGRMVIDMFPQM-IREVKPDDLTFTAVLSACSHSGIVDEGWRCFHSL-RFY 380
Query: 381 GIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRI 440
G+ P+++HY CMVDLL RAGL++EAE ++ MP+ P+ + G++L +C ++ +E RI
Sbjct: 381 GLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERI 440
Query: 441 GRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNGTFY 500
R + +M P + +L+ N+Y + GR + A LR S +KIPG SSI +N + +
Sbjct: 441 KRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLR-GSLRKRGIRKIPGLSSIYVNDSVH 499
Query: 501 QFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVP-VFGXXXXXXXXXXXXXTALSVHSEKL 559
+F GDRSHP+++E+Y L+E+ +++ AGYVP V G AL HSEKL
Sbjct: 500 RFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLVSHSEGDLEEKEQALCCHSEKL 559
Query: 560 AIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRVIIVRDRTRYHHFKDGICSC 619
A+ FGLL T P TP+ + KNLR+CRDCH K +SKVYDR II+RDR R+H FK G CSC
Sbjct: 560 AVCFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDRNRFHQFKGGSCSC 619
Query: 620 KDYW 623
DYW
Sbjct: 620 SDYW 623
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 404 bits (1039), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/600 (37%), Positives = 342/600 (57%), Gaps = 47/600 (7%)
Query: 31 QQIKQTHAQLVTTALISHHVSANKFLK-LVADASLSYAHKLFDQIPQPDLFIYNTMIKAH 89
+Q+K+ HA ++ T + + L+ LV + YA ++FD++ +P +F++NT+ K +
Sbjct: 25 KQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGY 84
Query: 90 SLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDS 149
+ +SL++++ + RD G+ P+ +++ F A G + +H VK G
Sbjct: 85 VRNQLPF-ESLLLYKKM-RDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGC 142
Query: 150 NVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQ 209
V L+ MY K+G +S A+ LF+ MQ
Sbjct: 143 LGIVATELVMMYMKFG-------------------------------ELSSAEFLFESMQ 171
Query: 210 EQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKW 269
+D+V+W+ +A VQ G AL++F++M + + +T VS L+AC L +L+ G+
Sbjct: 172 VKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEE 231
Query: 270 IHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHG 329
I+ + EI N + + +DM+ KCG E+A RV +E +R V W+ MI G+AM+G
Sbjct: 232 IYDRARKEEIDCNIIVENARLDMHLKCGNTEAA-RVLFEEMKQRNVVSWSTMIVGYAMNG 290
Query: 330 KPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMV--SDYGIIPEIE 387
EA+ +F M+ E + PN VTF+ +L+ACSH +V EGK YF LMV +D + P E
Sbjct: 291 DSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKE 350
Query: 388 HYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEM 447
HY CMVDLL R+GLL+EA + I MP+ PD IWGA+L AC +++DM G ++ ++ E
Sbjct: 351 HYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVET 410
Query: 448 DPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNGTFYQFLVGDR 507
P+ HVLL NIY+++G+W+ +R K TKK+ SS+E G + F GD+
Sbjct: 411 APDIGSYHVLLSNIYAAAGKWDCVDKVRSKMR-KLGTKKVAAYSSVEFEGKIHFFNRGDK 469
Query: 508 SHPQSRELYSFLDEMTTKLKIAGYVP----VFGXXXXXXXXXXXXXTALSVHSEKLAIAF 563
SHPQS+ +Y LDE+ K++ GYVP VF +LS HSEKLAIAF
Sbjct: 470 SHPQSKAIYEKLDEILKKIRKMGYVPDTCSVF-----HDVEMEEKECSLSHHSEKLAIAF 524
Query: 564 GLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRVIIVRDRTRYHHFKDGICSCKDYW 623
GL+ PG PIR++KNLR C DCH +KF+S + II+RD+ R+HHF++G+CSCK++W
Sbjct: 525 GLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 402 bits (1034), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/581 (37%), Positives = 340/581 (58%), Gaps = 18/581 (3%)
Query: 44 ALISHHVSANKFLKLVADASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVF 103
AL+S + F+K + A + FD + D+ +NT+I ++ S +++ +F
Sbjct: 218 ALVSWNCLLGGFVK---KKKIVEARQFFDSMNVRDVVSWNTIITGYAQS-GKIDEARQLF 273
Query: 104 RLLTRDSGLSPNRYSFVFTFGACGNG-LSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYG 162
SP VFT+ A +G + + E+ R K+ + N NA++ Y
Sbjct: 274 -------DESP--VQDVFTWTAMVSGYIQNRMVEEARELFDKMP-ERNEVSWNAMLAGYV 323
Query: 163 KWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAG 222
+ +E +++F+ +++ +WNTMI Y G +S+AK LFD+M ++D VSW+ +IAG
Sbjct: 324 QGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAG 383
Query: 223 YVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMN 282
Y Q G EAL F +M + G + N +F SAL+ C+++VAL+ GK +H + +G +
Sbjct: 384 YSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETG 443
Query: 283 ERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMK 342
+ +++ MY KCG IE A+ +F E A + + WN MI G++ HG A++ F+ MK
Sbjct: 444 CFVGNALLLMYCKCGSIEEANDLFKEM-AGKDIVSWNTMIAGYSRHGFGEVALRFFESMK 502
Query: 343 VENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLL 402
E + P+ T VA+L+ACSH +V++G+ YF M DYG++P +HY CMVDLL RAGLL
Sbjct: 503 REGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLL 562
Query: 403 KEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIY 462
++A +++ +MP PD AIWG +L A R++ + E I M+P + G +VLL N+Y
Sbjct: 563 EDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLY 622
Query: 463 SSSGRWNDARMLREKSEISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEM 522
+SSGRW D LR + KK+PG S IE+ + F VGD HP+ E+++FL+E+
Sbjct: 623 ASSGRWGDVGKLRVRMR-DKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEEL 681
Query: 523 TTKLKIAGYVPVFGXXXXXXXXXXXXXTALSVHSEKLAIAFGLLNTAPGTPIRIVKNLRV 582
++K AGYV + HSE+LA+A+G++ + G PIR++KNLRV
Sbjct: 682 DLRMKKAGYVSKTSVVLHDVEEEEKERM-VRYHSERLAVAYGIMRVSSGRPIRVIKNLRV 740
Query: 583 CRDCHQVTKFISKVYDRVIIVRDRTRYHHFKDGICSCKDYW 623
C DCH K+++++ R+II+RD R+HHFKDG CSC DYW
Sbjct: 741 CEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 190/405 (46%), Gaps = 46/405 (11%)
Query: 50 VSANKFLK-LVADASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTR 108
VS N +K V + +L A +LF+ +P+ D+ +NTM+ ++ + +D+ VF +
Sbjct: 127 VSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQN-GCVDDARSVFDRMPE 185
Query: 109 DSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVV-NALIGMYGKWGLV 167
+ +S N + VQ + + + ++ V N L+G + K +
Sbjct: 186 KNDVSWNALLSAY----------VQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKI 235
Query: 168 EYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVG 227
R+ F+ +D+ SWNT+I Y SG + +A++LFDE QDV +W+ +++GY+Q
Sbjct: 236 VEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNR 295
Query: 228 CFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLA 287
EA + F +M P+ NE ++ + LA ++ K + + N
Sbjct: 296 MVEEARELFDKM----PERNEVSWNAMLAGYVQGERMEMAKELFDVMP----CRNVSTWN 347
Query: 288 SIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVS 347
++I YA+CG+I A +F + KR W AMI G++ G EA+++F +M+ E
Sbjct: 348 TMITGYAQCGKISEAKNLF-DKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGR 406
Query: 348 PNKVTFVALLNACSHGYMVEEGK-LYFRLMVSDYGIIPEIEHYGCMVD-----LLSRAGL 401
N+ +F + L+ C+ +E GK L+ RL+ Y GC V + + G
Sbjct: 407 LNRSSFSSALSTCADVVALELGKQLHGRLVKGGY-------ETGCFVGNALLLMYCKCGS 459
Query: 402 LKEAEDMISSMPMAPDVAIWGAVLN----------ACRIYKDMER 436
++EA D+ M D+ W ++ A R ++ M+R
Sbjct: 460 IEEANDLFKEMA-GKDIVSWNTMIAGYSRHGFGEVALRFFESMKR 503
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 159/326 (48%), Gaps = 53/326 (16%)
Query: 155 NALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVV 214
N +I Y + G E RK+F+ ++DL SWN MI YV + N+ +A+ELF+ M E+DV
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVC 158
Query: 215 SWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQG------- 267
SW+T+++GY Q GC +A F RM P+ N+ ++ + L+A +++
Sbjct: 159 SWNTMLSGYAQNGCVDDARSVFDRM----PEKNDVSWNALLSAYVQNSKMEEACMLFKSR 214
Query: 268 -KW--------IHSFIGRGEI--------KMNERLLAS---IIDMYAKCGEIESASRVFW 307
W + F+ + +I MN R + S II YA+ G+I+ A ++F
Sbjct: 215 ENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLF- 273
Query: 308 EHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVE 367
+ + + V+ W AM+ G+ + EA ++F KM N+V++ A+L G +E
Sbjct: 274 DESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERME 329
Query: 368 EGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVL-- 425
K F +M + + M+ ++ G + EA+++ MP V+ W A++
Sbjct: 330 MAKELFDVMP-----CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVS-WAAMIAG 383
Query: 426 --------NACRIYKDMER-GYRIGR 442
A R++ MER G R+ R
Sbjct: 384 YSQSGHSFEALRLFVQMEREGGRLNR 409
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 400 bits (1027), Expect = e-111, Method: Compositional matrix adjust.
Identities = 237/614 (38%), Positives = 335/614 (54%), Gaps = 46/614 (7%)
Query: 20 LASLVDTCKSIQQIKQTHAQLVTTALIS-----HHVSANKFLKLVADASLSYAHKLFDQI 74
L SL+ + ++Q HA L+ T+LI HH + L L+ ++Y+ ++F Q
Sbjct: 14 LLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIP-RDINYSCRVFSQR 72
Query: 75 PQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQE 134
P L NTMI+A SLS + C + +FR L R+S L N S F C ++
Sbjct: 73 LNPTLSHCNTMIRAFSLSQTPC-EGFRLFRSLRRNSSLPANPLSSSFALKCC-----IKS 126
Query: 135 GEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVG 194
G+ L+G GL +G K+F D T++ Y
Sbjct: 127 GD--------------------LLG-----GLQIHG-KIFSDGFLSDSLLMTTLMDLYST 160
Query: 195 SGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRM---LQVGPKPNEYTF 251
N + A ++FDE+ ++D VSW+ + + Y++ + L F +M + KP+ T
Sbjct: 161 CENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTC 220
Query: 252 VSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNA 311
+ AL AC+NL ALD GK +H FI + L +++ MY++CG ++ A +VF+
Sbjct: 221 LLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMR- 279
Query: 312 KRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKL 371
+R V W A+I G AM+G EAI+ F +M +SP + T LL+ACSH +V EG +
Sbjct: 280 ERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMM 339
Query: 372 YF-RLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRI 430
+F R+ ++ I P + HYGC+VDLL RA LL +A +I SM M PD IW +L ACR+
Sbjct: 340 FFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRV 399
Query: 431 YKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLRE-KSEISTATKKIPG 489
+ D+E G R+ + E+ G +VLL N YS+ G+W LR E TK PG
Sbjct: 400 HGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTK--PG 457
Query: 490 CSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVFGXXXXXXXXXXXXX 549
CS+IEL GT ++F+V D SHP+ E+Y L E+ +LKIAGYV
Sbjct: 458 CSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYVAEITSELHNLESEEEKG 517
Query: 550 TALSVHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRVIIVRDRTRY 609
AL HSEKLAIAFG+L T PGT IR+ KNLR C DCH KF+S VYDR++IVRDR+R+
Sbjct: 518 YALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVDCHNFAKFVSDVYDRIVIVRDRSRF 577
Query: 610 HHFKDGICSCKDYW 623
HHFK G CSC D+W
Sbjct: 578 HHFKGGSCSCNDFW 591
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 399 bits (1025), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/585 (38%), Positives = 339/585 (57%), Gaps = 15/585 (2%)
Query: 40 LVTTALISHHVSANKFLKLVADASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDS 99
L+ +AL+ ++ N ++ A +LFD+ +L + N M ++ + ++
Sbjct: 272 LMVSALVDMYMKCN---------AIDVAKRLFDEYGASNLDLCNAM-ASNYVRQGLTREA 321
Query: 100 LMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIG 159
L VF L+ DSG+ P+R S + +C ++ G+ + ++ G +S + NALI
Sbjct: 322 LGVFNLMM-DSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALID 380
Query: 160 MYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTI 219
MY K + ++F+ +K + +WN+++A YV +G + A E F+ M E+++VSW+TI
Sbjct: 381 MYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTI 440
Query: 220 IAGYVQVGCFMEALDFFHRML-QVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGE 278
I+G VQ F EA++ F M Q G + T +S +AC +L ALD KWI+ +I +
Sbjct: 441 ISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNG 500
Query: 279 IKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVF 338
I+++ RL +++DM+++CG+ ESA +F R V W A IG AM G AI++F
Sbjct: 501 IQLDVRLGTTLVDMFSRCGDPESAMSIF-NSLTNRDVSAWTAAIGAMAMAGNAERAIELF 559
Query: 339 QKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSR 398
M + + P+ V FV L ACSHG +V++GK F M+ +G+ PE HYGCMVDLL R
Sbjct: 560 DDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGR 619
Query: 399 AGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLL 458
AGLL+EA +I MPM P+ IW ++L ACR+ ++E I+ + P G +VLL
Sbjct: 620 AGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLL 679
Query: 459 GNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSF 518
N+Y+S+GRWND +R S +K PG SSI++ G ++F GD SHP+ + +
Sbjct: 680 SNVYASAGRWNDMAKVR-LSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAM 738
Query: 519 LDEMTTKLKIAGYVPVFGXXXXXXXXXXXXXTALSVHSEKLAIAFGLLNTAPGTPIRIVK 578
LDE++ + G+VP LS HSEKLA+A+GL+++ GT IRIVK
Sbjct: 739 LDEVSQRASHLGHVPDLSNVLMDVDEKEKIFM-LSRHSEKLAMAYGLISSNKGTTIRIVK 797
Query: 579 NLRVCRDCHQVTKFISKVYDRVIIVRDRTRYHHFKDGICSCKDYW 623
NLRVC DCH KF SKVY+R II+RD R+H+ + G CSC D+W
Sbjct: 798 NLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 194/384 (50%), Gaps = 54/384 (14%)
Query: 6 STLTKP--FHSDHCCRLA-SLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFL----KL 58
+T TKP + C + S + CK+I ++K H L L + + K + +L
Sbjct: 18 TTTTKPSLLNQSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCEL 77
Query: 59 VADASLSYAHKLFDQIPQ-PDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRY 117
SLS+A ++F+ F+YN++I+ ++ S CN+++++F L +SG+SP++Y
Sbjct: 78 GTRESLSFAKEVFENSESYGTCFMYNSLIRGYA-SSGLCNEAILLF-LRMMNSGISPDKY 135
Query: 118 SFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWA 177
+F F AC + G Q+ VK+G
Sbjct: 136 TFPFGLSACAKSRAKGNGIQIHGLIVKMGYA----------------------------- 166
Query: 178 VDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFH 237
KDL+ N+++ Y G + A+++FDEM E++VVSW+++I GY + +A+D F
Sbjct: 167 --KDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFF 224
Query: 238 RMLQVGP-KPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKC 296
RM++ PN T V ++AC+ L L+ G+ +++FI I++N+ ++++++DMY KC
Sbjct: 225 RMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKC 284
Query: 297 GEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVAL 356
I+ A R+F E+ A + NAM + G EA+ VF M V P++++ ++
Sbjct: 285 NAIDVAKRLFDEYGAS-NLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSA 343
Query: 357 LNACS-----------HGYMVEEG 369
+++CS HGY++ G
Sbjct: 344 ISSCSQLRNILWGKSCHGYVLRNG 367
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 112/207 (54%), Gaps = 6/207 (2%)
Query: 169 YGRKVFEWAVDKDLYSWNTMIAAYVGSG---NMSQAKELFDEMQEQDVV-SWSTIIAGYV 224
+ R + + +D D+ + ++A G ++S AKE+F+ + ++++I GY
Sbjct: 51 FHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYA 110
Query: 225 QVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNER 284
G EA+ F RM+ G P++YTF L+AC+ A G IH I + +
Sbjct: 111 SSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLF 170
Query: 285 LLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKM-KV 343
+ S++ YA+CGE++SA +VF E ++R V W +MI G+A +A+ +F +M +
Sbjct: 171 VQNSLVHFYAECGELDSARKVFDEM-SERNVVSWTSMICGYARRDFAKDAVDLFFRMVRD 229
Query: 344 ENVSPNKVTFVALLNACSHGYMVEEGK 370
E V+PN VT V +++AC+ +E G+
Sbjct: 230 EEVTPNSVTMVCVISACAKLEDLETGE 256
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 394 bits (1013), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/585 (37%), Positives = 338/585 (57%), Gaps = 15/585 (2%)
Query: 39 QLVTTALISHHVSANKFLKLVADASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCND 98
L+ +AL+ ++ N ++ A +LFD+ +L + N M ++ + +
Sbjct: 271 DLMVSALVDMYMKCN---------AIDVAKRLFDEYGASNLDLCNAM-ASNYVRQGLTRE 320
Query: 99 SLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALI 158
+L VF L+ DSG+ P+R S + +C ++ G+ + ++ G +S + NALI
Sbjct: 321 ALGVFNLMM-DSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALI 379
Query: 159 GMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWST 218
MY K + ++F+ +K + +WN+++A YV +G + A E F+ M E+++VSW+T
Sbjct: 380 DMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNT 439
Query: 219 IIAGYVQVGCFMEALDFFHRML-QVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRG 277
II+G VQ F EA++ F M Q G + T +S +AC +L ALD KWI+ +I +
Sbjct: 440 IISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN 499
Query: 278 EIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKV 337
I+++ RL +++DM+++CG+ ESA +F R V W A IG AM G AI++
Sbjct: 500 GIQLDVRLGTTLVDMFSRCGDPESAMSIF-NSLTNRDVSAWTAAIGAMAMAGNAERAIEL 558
Query: 338 FQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLS 397
F M + + P+ V FV L ACSHG +V++GK F M+ +G+ PE HYGCMVDLL
Sbjct: 559 FDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLG 618
Query: 398 RAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVL 457
RAGLL+EA +I MPM P+ IW ++L ACR+ ++E I+ + P G +VL
Sbjct: 619 RAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVL 678
Query: 458 LGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYS 517
L N+Y+S+GRWND +R S +K PG SSI++ G ++F GD SHP+ + +
Sbjct: 679 LSNVYASAGRWNDMAKVR-LSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEA 737
Query: 518 FLDEMTTKLKIAGYVPVFGXXXXXXXXXXXXXTALSVHSEKLAIAFGLLNTAPGTPIRIV 577
LDE++ + G+VP LS HSEKLA+A+GL+++ GT IRIV
Sbjct: 738 MLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFM-LSRHSEKLAMAYGLISSNKGTTIRIV 796
Query: 578 KNLRVCRDCHQVTKFISKVYDRVIIVRDRTRYHHFKDGICSCKDY 622
KNLRVC DCH KF SKVY+R II+RD R+H+ + G CSC D+
Sbjct: 797 KNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 194/384 (50%), Gaps = 54/384 (14%)
Query: 6 STLTKP--FHSDHCCRLA-SLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFL----KL 58
+T TKP + C + S + CK+I ++K H L L + + K + +L
Sbjct: 18 TTTTKPSLLNQSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCEL 77
Query: 59 VADASLSYAHKLFDQIPQ-PDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRY 117
SLS+A ++F+ F+YN++I+ ++ S CN+++++F L +SG+SP++Y
Sbjct: 78 GTRESLSFAKEVFENSESYGTCFMYNSLIRGYA-SSGLCNEAILLF-LRMMNSGISPDKY 135
Query: 118 SFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWA 177
+F F AC + G Q+ VK+G
Sbjct: 136 TFPFGLSACAKSRAKGNGIQIHGLIVKMGYA----------------------------- 166
Query: 178 VDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFH 237
KDL+ N+++ Y G + A+++FDEM E++VVSW+++I GY + +A+D F
Sbjct: 167 --KDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFF 224
Query: 238 RMLQVGP-KPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKC 296
RM++ PN T V ++AC+ L L+ G+ +++FI I++N+ ++++++DMY KC
Sbjct: 225 RMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKC 284
Query: 297 GEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVAL 356
I+ A R+F E+ A + NAM + G EA+ VF M V P++++ ++
Sbjct: 285 NAIDVAKRLFDEYGAS-NLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSA 343
Query: 357 LNACS-----------HGYMVEEG 369
+++CS HGY++ G
Sbjct: 344 ISSCSQLRNILWGKSCHGYVLRNG 367
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 112/207 (54%), Gaps = 6/207 (2%)
Query: 169 YGRKVFEWAVDKDLYSWNTMIAAYVGSG---NMSQAKELFDEMQEQDVV-SWSTIIAGYV 224
+ R + + +D D+ + ++A G ++S AKE+F+ + ++++I GY
Sbjct: 51 FHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYA 110
Query: 225 QVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNER 284
G EA+ F RM+ G P++YTF L+AC+ A G IH I + +
Sbjct: 111 SSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLF 170
Query: 285 LLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKM-KV 343
+ S++ YA+CGE++SA +VF E ++R V W +MI G+A +A+ +F +M +
Sbjct: 171 VQNSLVHFYAECGELDSARKVFDEM-SERNVVSWTSMICGYARRDFAKDAVDLFFRMVRD 229
Query: 344 ENVSPNKVTFVALLNACSHGYMVEEGK 370
E V+PN VT V +++AC+ +E G+
Sbjct: 230 EEVTPNSVTMVCVISACAKLEDLETGE 256
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 389 bits (999), Expect = e-108, Method: Compositional matrix adjust.
Identities = 223/602 (37%), Positives = 329/602 (54%), Gaps = 49/602 (8%)
Query: 22 SLVDTC---KSIQQIKQTHAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIPQP 77
+L+ C K + Q + HA ++ + V N L + A SL A K+F+++PQ
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQR 124
Query: 78 DLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQ 137
D + T+I +S C D+L+ F + R G SPN ++ A G Q
Sbjct: 125 DFVTWTTLISGYSQHDRPC-DALLFFNQMLR-FGYSPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 138 VRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGN 197
+ VK G DSNV V +AL+ +Y ++GL
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGL------------------------------- 211
Query: 198 MSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAA 257
M A+ +FD ++ ++ VSW+ +IAG+ + +AL+ F ML+ G +P+ +++ S A
Sbjct: 212 MDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGA 271
Query: 258 CSNLVALDQGKWIHSFIGRGEIKMNERLLA----SIIDMYAKCGEIESASRVFWEHNAKR 313
CS+ L+QGKW+H+++ IK E+L+A +++DMYAK G I A ++F + AKR
Sbjct: 272 CSSTGFLEQGKWVHAYM----IKSGEKLVAFAGNTLLDMYAKSGSIHDARKIF-DRLAKR 326
Query: 314 KVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYF 373
V WN+++ +A HG EA+ F++M+ + PN+++F+++L ACSH +++EG Y+
Sbjct: 327 DVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYY 386
Query: 374 RLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKD 433
LM D GI+PE HY +VDLL RAG L A I MP+ P AIW A+LNACR++K+
Sbjct: 387 ELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKN 445
Query: 434 MERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSI 493
E G + E+DP+ G HV+L NIY+S GRWNDA +R+K + + KK P CS +
Sbjct: 446 TELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMK-ESGVKKEPACSWV 504
Query: 494 ELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVFGXXXXXXXXXXXXXTALS 553
E+ + F+ D HPQ E+ +E+ K+K GYVP L
Sbjct: 505 EIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVN-LQ 563
Query: 554 VHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRVIIVRDRTRYHHFK 613
HSEK+A+AF LLNT PG+ I I KN+RVC DCH K SKV R IIVRD R+HHFK
Sbjct: 564 YHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFK 623
Query: 614 DG 615
D
Sbjct: 624 DA 625
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 385 bits (990), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/517 (38%), Positives = 296/517 (57%), Gaps = 7/517 (1%)
Query: 111 GLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYG 170
G P++ + + G+ + G + + +K GL + V++A+I MYGK G V
Sbjct: 247 GFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGI 306
Query: 171 RKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQ----DVVSWSTIIAGYVQV 226
+F + N I +G + +A E+F+ +EQ +VVSW++IIAG Q
Sbjct: 307 ISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQN 366
Query: 227 GCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLL 286
G +EAL+ F M G KPN T S L AC N+ AL G+ H F R + N +
Sbjct: 367 GKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVG 426
Query: 287 ASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENV 346
+++IDMYAKCG I + VF K V WN+++ GF+MHGK E + +F+ + +
Sbjct: 427 SALIDMYAKCGRINLSQIVFNMMPTKNLVC-WNSLMNGFSMHGKAKEVMSIFESLMRTRL 485
Query: 347 SPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAE 406
P+ ++F +LL+AC + +EG YF++M +YGI P +EHY CMV+LL RAG L+EA
Sbjct: 486 KPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAY 545
Query: 407 DMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSG 466
D+I MP PD +WGA+LN+CR+ +++ + ++P + G +VLL NIY++ G
Sbjct: 546 DLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKG 605
Query: 467 RWNDARMLREKSEISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKL 526
W + +R K E S KK PGCS I++ Y L GD+SHPQ ++ +DE++ ++
Sbjct: 606 MWTEVDSIRNKME-SLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEM 664
Query: 527 KIAGYVPVFGXXXXXXXXXXXXXTALSVHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDC 586
+ +G+ P L HSEKLA+ FGLLNT GTP++++KNLR+C DC
Sbjct: 665 RKSGHRPNLDFALHDVEEQEQEQM-LWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDC 723
Query: 587 HQVTKFISKVYDRVIIVRDRTRYHHFKDGICSCKDYW 623
H V KFIS R I +RD R+HHFKDGICSC D+W
Sbjct: 724 HAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 209/437 (47%), Gaps = 53/437 (12%)
Query: 35 QTHAQLVTT-ALISHHVSANKFLKLVADAS----LSYAHKLFDQIPQPDLFIYNTMIKAH 89
Q HA+++ + A ++SA KL+A S + A + IP P ++ ++++I A
Sbjct: 36 QAHARILKSGAQNDGYISA----KLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYAL 91
Query: 90 SLSPSSCNDSLMVF-RLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLD 148
+ S+ VF R+ + GL P+ + F C + + G+Q+ + GLD
Sbjct: 92 T-KAKLFTQSIGVFSRMFSH--GLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLD 148
Query: 149 SNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEM 208
+ FV ++ MY + G + RKVF+ DKD+ + + ++ AY G + + + EM
Sbjct: 149 MDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEM 208
Query: 209 Q----EQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVAL 264
+ E ++VSW+ I++G+ + G EA+ F ++ +G P++ T S L + + L
Sbjct: 209 ESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEML 268
Query: 265 DQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGE----------------------IESA 302
+ G+ IH ++ + + ++ +++++IDMY K G I
Sbjct: 269 NMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGL 328
Query: 303 SR------------VFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNK 350
SR +F E + V W ++I G A +GK EA+++F++M+V V PN
Sbjct: 329 SRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNH 388
Query: 351 VTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMIS 410
VT ++L AC + + G+ V + ++ + ++D+ ++ G + ++ + +
Sbjct: 389 VTIPSMLPACGNIAALGHGRSTHGFAVRVH-LLDNVHVGSALIDMYAKCGRINLSQIVFN 447
Query: 411 SMPMAPDVAIWGAVLNA 427
MP ++ W +++N
Sbjct: 448 MMP-TKNLVCWNSLMNG 463
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 77/154 (50%), Gaps = 6/154 (3%)
Query: 98 DSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNAL 157
++L +FR + + +G+ PN + ACGN ++ G AV+V L NV V +AL
Sbjct: 371 EALELFREM-QVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSAL 429
Query: 158 IGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQ----EQDV 213
I MY K G + + VF K+L WN+++ + G + +F+ + + D
Sbjct: 430 IDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDF 489
Query: 214 VSWSTIIAGYVQVGCFMEALDFFHRML-QVGPKP 246
+S++++++ QVG E +F M + G KP
Sbjct: 490 ISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKP 523
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 385 bits (989), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/608 (35%), Positives = 332/608 (54%), Gaps = 42/608 (6%)
Query: 22 SLVDTC---KSIQQIKQTHAQLVTTALISHHVSANKFLKLVADAS-LSYAHKLFDQIPQP 77
+L++ C ++++ ++ HA ++ T + + L L A K+ D++P+
Sbjct: 57 ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEK 116
Query: 78 DLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQ 137
++ + MI +S + S +++L VF + R G PN ++F +C + G+Q
Sbjct: 117 NVVSWTAMISRYSQTGHS-SEALTVFAEMMRSDG-KPNEFTFATVLTSCIRASGLGLGKQ 174
Query: 138 VRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGN 197
+ VK DS++FV ++L+ M Y +G
Sbjct: 175 IHGLIVKWNYDSHIFVGSSLLDM-------------------------------YAKAGQ 203
Query: 198 MSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAA 257
+ +A+E+F+ + E+DVVS + IIAGY Q+G EAL+ FHR+ G PN T+ S L A
Sbjct: 204 IKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTA 263
Query: 258 CSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWP 317
S L LD GK H + R E+ L S+IDMY+KCG + A R+F ++ +R
Sbjct: 264 LSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLF-DNMPERTAIS 322
Query: 318 WNAMIGGFAMHGKPSEAIKVFQKMKVEN-VSPNKVTFVALLNACSHGYMVEEGKLYFRLM 376
WNAM+ G++ HG E +++F+ M+ E V P+ VT +A+L+ CSHG M + G F M
Sbjct: 323 WNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGM 382
Query: 377 VS-DYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDME 435
V+ +YG P EHYGC+VD+L RAG + EA + I MP P + G++L ACR++ ++
Sbjct: 383 VAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVD 442
Query: 436 RGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIEL 495
G +GR + E++P + G +V+L N+Y+S+GRW D +R + A K PG S I+
Sbjct: 443 IGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMM-MQKAVTKEPGRSWIQH 501
Query: 496 NGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVFGXXXXXXXXXXXXXTALSVH 555
T + F DR+HP+ E+ + + E++ K+K AGYVP L H
Sbjct: 502 EQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLG-H 560
Query: 556 SEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRVIIVRDRTRYHHFKDG 615
SEKLA+ FGL+ T G PIR+ KNLR+C DCH K SKV++R + +RD+ R+H DG
Sbjct: 561 SEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDG 620
Query: 616 ICSCKDYW 623
ICSC DYW
Sbjct: 621 ICSCGDYW 628
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 3/221 (1%)
Query: 239 MLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGE 298
M +GP+ + + + L AC + AL G+ +H+ + + L ++ Y KC
Sbjct: 43 MAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDC 102
Query: 299 IESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLN 358
+E A +V E ++ V W AMI ++ G SEA+ VF +M + PN+ TF +L
Sbjct: 103 LEDARKVLDEM-PEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLT 161
Query: 359 ACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDV 418
+C + GK L+V + I ++D+ ++AG +KEA ++ +P V
Sbjct: 162 SCIRASGLGLGKQIHGLIVK-WNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVV 220
Query: 419 AIWGAVLNACRIYKDMERGYRIGRIIKE-MDPNHVGCHVLL 458
+ + ++ D E R+ E M PN+V LL
Sbjct: 221 SCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLL 261
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 384 bits (987), Expect = e-107, Method: Compositional matrix adjust.
Identities = 221/644 (34%), Positives = 347/644 (53%), Gaps = 54/644 (8%)
Query: 22 SLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVADASL----SYAHKLFDQIPQP 77
SL+ CK ++ HAQ++ ++S V+A +LV+ +SL Y+ +F +
Sbjct: 34 SLIHACKDTASLRHVHAQILRRGVLSSRVAA----QLVSCSSLLKSPDYSLSIFRNSEER 89
Query: 78 DLFIYNTMIKA---HSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQE 134
+ F+ N +I+ ++ SS +++ RL G+ P+R +F F +
Sbjct: 90 NPFVLNALIRGLTENARFESSVRHFILMLRL-----GVKPDRLTFPFVLKSNSKLGFRWL 144
Query: 135 GEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVD--------------- 179
G + + +K +D + FV +L+ MY K G +++ +VFE + D
Sbjct: 145 GRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLIN 204
Query: 180 -----KDLY---------------SWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTI 219
KD++ SW+T+I YV SG +++AK+LF+ M E++VVSW+T+
Sbjct: 205 GYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTL 264
Query: 220 IAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEI 279
I G+ Q G + A+ + ML+ G KPNEYT + L+ACS AL G IH +I I
Sbjct: 265 INGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGI 324
Query: 280 KMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQ 339
K++ + +++DMYAKCGE++ A+ VF N K + W AMI G+A+HG+ +AI+ F+
Sbjct: 325 KLDRAIGTALVDMYAKCGELDCAATVFSNMNHK-DILSWTAMIQGWAVHGRFHQAIQCFR 383
Query: 340 KMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRA 399
+M P++V F+A+L AC + V+ G +F M DY I P ++HY +VDLL RA
Sbjct: 384 QMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRA 443
Query: 400 GLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLG 459
G L EA +++ +MP+ PD+ W A+ AC+ +K R + + + E+DP G ++ L
Sbjct: 444 GKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLD 503
Query: 460 NIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFL 519
++S G D R + + + G S IEL+G +F GD SH ++E+ L
Sbjct: 504 KTHASKGNIQDVEKRRLSLQKRIKERSL-GWSYIELDGQLNKFSAGDYSHKLTQEIGLKL 562
Query: 520 DEMTTKLKIAGYVPVFGXXXXXXXXXXXXXTALSVHSEKLAIAFGLLNTAPGTPIRIVKN 579
DE+ + GY P +HSEKLA+ G L TAPGT IRI+KN
Sbjct: 563 DEIISLAIQKGYNPG-ADWSIHDIEEEEKENVTGIHSEKLALTLGFLRTAPGTTIRIIKN 621
Query: 580 LRVCRDCHQVTKFISKVYDRVIIVRDRTRYHHFKDGICSCKDYW 623
LR+C DCH + K++SK+ R I++RD ++HHFKDG CSC DYW
Sbjct: 622 LRICGDCHSLMKYVSKISQRDILLRDARQFHHFKDGRCSCGDYW 665
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 384 bits (987), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/562 (36%), Positives = 317/562 (56%), Gaps = 37/562 (6%)
Query: 62 ASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVF 121
SL A +LFD + + ++ +N+MI A+ + + +++++F+ + D G+ P S +
Sbjct: 285 GSLETARQLFDGMLERNVVSWNSMIDAY-VQNENPKEAMLIFQKML-DEGVKPTDVSVMG 342
Query: 122 TFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKD 181
AC + ++ G + +V++GLD NV VVN+L
Sbjct: 343 ALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSL------------------------ 378
Query: 182 LYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQ 241
I+ Y + A +F ++Q + +VSW+ +I G+ Q G ++AL++F +M
Sbjct: 379 -------ISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRS 431
Query: 242 VGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIES 301
KP+ +T+VS + A + L KWIH + R + N + +++DMYAKCG I
Sbjct: 432 RTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMI 491
Query: 302 ASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACS 361
A R+ ++ ++R V WNAMI G+ HG A+++F++M+ + PN VTF+++++ACS
Sbjct: 492 A-RLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACS 550
Query: 362 HGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIW 421
H +VE G F +M +Y I ++HYG MVDLL RAG L EA D I MP+ P V ++
Sbjct: 551 HSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVY 610
Query: 422 GAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEIS 481
GA+L AC+I+K++ + + E++P+ G HVLL NIY ++ W +R S +
Sbjct: 611 GAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVR-VSMLR 669
Query: 482 TATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVFGXXXXX 541
+K PGCS +E+ + F G +HP S+++Y+FL+++ +K AGYVP
Sbjct: 670 QGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVP--DTNLVL 727
Query: 542 XXXXXXXXTALSVHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRVI 601
LS HSEKLAI+FGLLNT GT I + KNLRVC DCH TK+IS V R I
Sbjct: 728 GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREI 787
Query: 602 IVRDRTRYHHFKDGICSCKDYW 623
+VRD R+HHFK+G CSC DYW
Sbjct: 788 VVRDMQRFHHFKNGACSCGDYW 809
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 167/358 (46%), Gaps = 35/358 (9%)
Query: 21 ASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIPQPDL 79
A L++ C S+++++Q + L H K + L S+ A ++F+ I
Sbjct: 41 ALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLN 100
Query: 80 FIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVR 139
+Y+TM+K + S D + F + R + P Y+F + CG+ ++ G+++
Sbjct: 101 VLYHTMLKG--FAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIH 158
Query: 140 SHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMS 199
VK G ++F + L MY K V RKVF+ ++DL SWNT++A Y +G
Sbjct: 159 GLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMAR 218
Query: 200 QAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACS 259
A E+ M E+++ KP+ T VS L A S
Sbjct: 219 MALEMVKSMCEENL-------------------------------KPSFITIVSVLPAVS 247
Query: 260 NLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWN 319
L + GK IH + R + +++DMYAKCG +E+A ++F + +R V WN
Sbjct: 248 ALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLF-DGMLERNVVSWN 306
Query: 320 AMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMV 377
+MI + + P EA+ +FQKM E V P V+ + L+AC+ +E G+ +L V
Sbjct: 307 SMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSV 364
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 382 bits (982), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/628 (33%), Positives = 335/628 (53%), Gaps = 42/628 (6%)
Query: 4 FCSTLTKPFHSDHCCRLASLVDTCKSIQQI---KQTHAQLVTTALISHHVSA--NKFLKL 58
F + F SD L+S+ C ++ + KQ H+ + + L+ + + + K
Sbjct: 257 FLDMVLSGFESDKFT-LSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKC 315
Query: 59 VADASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYS 118
AD S+ K+FD++ + + +I + + + +++ +F + + PN ++
Sbjct: 316 SADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFT 375
Query: 119 FVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAV 178
F F ACGN + G+QV A K GL SN V N++I M+
Sbjct: 376 FSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMF----------------- 418
Query: 179 DKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHR 238
V S M A+ F+ + E+++VS++T + G + F +A
Sbjct: 419 --------------VKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSE 464
Query: 239 MLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGE 298
+ + + +TF S L+ +N+ ++ +G+ IHS + + + N+ + ++I MY+KCG
Sbjct: 465 ITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGS 524
Query: 299 IESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLN 358
I++ASRVF R V W +MI GFA HG ++ F +M E V PN+VT+VA+L+
Sbjct: 525 IDTASRVF-NFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILS 583
Query: 359 ACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDV 418
ACSH +V EG +F M D+ I P++EHY CMVDLL RAGLL +A + I++MP DV
Sbjct: 584 ACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADV 643
Query: 419 AIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKS 478
+W L ACR++ + E G R I E+DPN ++ L NIY+ +G+W ++ +R K
Sbjct: 644 LVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKM 703
Query: 479 EISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVP---VF 535
+ K+ GCS IE+ ++F VGD +HP + ++Y LD + T++K GYVP +
Sbjct: 704 KERNLVKE-GGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLV 762
Query: 536 GXXXXXXXXXXXXXTALSVHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISK 595
L HSEK+A+AFGL++T+ P+R+ KNLRVC DCH K+IS
Sbjct: 763 LHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYIST 822
Query: 596 VYDRVIIVRDRTRYHHFKDGICSCKDYW 623
V R I++RD R+HHFKDG CSC DYW
Sbjct: 823 VSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 162/356 (45%), Gaps = 48/356 (13%)
Query: 20 LASLVDTC---KSIQQIKQTHAQLVTTALISHHVSANKFLKLVADASLSY-AHKLFD--- 72
+SL+ +C + + K HA+L+ + V N + L + + S A +F+
Sbjct: 65 FSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMR 124
Query: 73 QIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSV 132
+ + D+ ++ M+ + + D++ VF + GL PN Y + AC N V
Sbjct: 125 RFGKRDVVSWSAMMACYGNNGREL-DAIKVFVEFL-ELGLVPNDYCYTAVIRACSNSDFV 182
Query: 133 QEGEQVRSHAVKVG-LDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAA 191
G +K G +S+V V +LI M+ K
Sbjct: 183 GVGRVTLGFLMKTGHFESDVCVGCSLIDMFVK---------------------------- 214
Query: 192 YVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTF 251
G + A ++FD+M E +VV+W+ +I +Q+G EA+ FF M+ G + +++T
Sbjct: 215 --GENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTL 272
Query: 252 VSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKC---GEIESASRVFWE 308
S +AC+ L L GK +HS+ R + + + S++DMYAKC G ++ +VF +
Sbjct: 273 SSVFSACAELENLSLGKQLHSWAIRS--GLVDDVECSLVDMYAKCSADGSVDDCRKVF-D 329
Query: 309 HNAKRKVWPWNAMIGGFAMHGK-PSEAIKVFQKMKVE-NVSPNKVTFVALLNACSH 362
V W A+I G+ + +EAI +F +M + +V PN TF + AC +
Sbjct: 330 RMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 165/361 (45%), Gaps = 27/361 (7%)
Query: 172 KVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQ---EQDVVSWSTIIAGYVQVGC 228
++ E+ ++ D +N++I+ Y SG+ ++A+++F+ M+ ++DVVSWS ++A Y G
Sbjct: 87 RLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGR 146
Query: 229 FMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGR-GEIKMNERLLA 287
++A+ F L++G PN+Y + + + ACSN + G+ F+ + G + + +
Sbjct: 147 ELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGC 206
Query: 288 SIIDMYAKCGE--IESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVEN 345
S+IDM+ K GE E+A +VF + ++ V W MI G P EAI+ F M +
Sbjct: 207 SLIDMFVK-GENSFENAYKVF-DKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSG 264
Query: 346 VSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEA 405
+K T ++ +AC+ + GK + G++ ++E +VD+ ++
Sbjct: 265 FESDKFTLSSVFSACAELENLSLGKQLHSWAIRS-GLVDDVE--CSLVDMYAKCSADGSV 321
Query: 406 EDMISSMPMAPD--VAIWGAVLNACRIYKDMERGYRIGRIIKEM------DPNHVGCHVL 457
+D D V W A++ K+ + EM +PN H
Sbjct: 322 DDCRKVFDRMEDHSVMSWTALITG--YMKNCNLATEAINLFSEMITQGHVEPN----HFT 375
Query: 458 LGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYS 517
+ + + G +D R+ K + A K+ +S N F+ DR R S
Sbjct: 376 FSSAFKACGNLSDPRV--GKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFES 433
Query: 518 F 518
Sbjct: 434 L 434
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 3/156 (1%)
Query: 219 IIAGYVQVGCFMEALDFFHRMLQVGPKP-NEYTFVSALAACSNLVALDQGKWIHSFIGRG 277
+I ++ G A+ M + G +P + TF S L +C GK +H+ +
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 278 EIKMNERLLASIIDMYAKCGEIESASRVF--WEHNAKRKVWPWNAMIGGFAMHGKPSEAI 335
+I+ + L S+I +Y+K G+ A VF KR V W+AM+ + +G+ +AI
Sbjct: 92 DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151
Query: 336 KVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKL 371
KVF + + PN + A++ ACS+ V G++
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRV 187
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 382 bits (981), Expect = e-106, Method: Compositional matrix adjust.
Identities = 228/620 (36%), Positives = 335/620 (54%), Gaps = 63/620 (10%)
Query: 24 VDTCKSIQQI---KQTHAQ----------LVTTALISHHVSANKFLKLVADASLSYAHKL 70
+ C S+ I KQTH Q V++ALI + + K L A K+
Sbjct: 83 IKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGK---------LEDARKV 133
Query: 71 FDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLL-----TRDSGLSPNRYSFVFTFGA 125
FD+IP+ ++ + +MI+ + L+ ++ D++ +F+ L D + + V A
Sbjct: 134 FDEIPKRNIVSWTSMIRGYDLNGNAL-DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISA 192
Query: 126 CGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSW 185
C + E + S +K G D V V N L+ Y K G
Sbjct: 193 CSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGG-------------------- 232
Query: 186 NTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPK 245
G ++ A+++FD++ ++D VS+++I++ Y Q G EA + F R+++
Sbjct: 233 ---------EGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVV 283
Query: 246 P-NEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASR 304
N T + L A S+ AL GK IH + R ++ + + SIIDMY KCG +E+A +
Sbjct: 284 TFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARK 343
Query: 305 VFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGY 364
F + + V W AMI G+ MHG ++A+++F M V PN +TFV++L ACSH
Sbjct: 344 AF-DRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAG 402
Query: 365 MVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAV 424
+ EG +F M +G+ P +EHYGCMVDLL RAG L++A D+I M M PD IW ++
Sbjct: 403 LHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSL 462
Query: 425 LNACRIYKDMERG-YRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTA 483
L ACRI+K++E + R+ E+D ++ G ++LL +IY+ +GRW D +R + +
Sbjct: 463 LAACRIHKNVELAEISVARLF-ELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMK-NRG 520
Query: 484 TKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVFGXXXXXXX 543
K PG S +ELNG + FL+GD HPQ ++Y FL E+ KL AGYV
Sbjct: 521 LVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVD 580
Query: 544 XXXXXXTALSVHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRVIIV 603
T L VHSEKLAIAFG++NT PG+ + +VKNLRVC DCH V K ISK+ DR +V
Sbjct: 581 EEEKEMT-LRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVV 639
Query: 604 RDRTRYHHFKDGICSCKDYW 623
RD R+HHFKDG CSC DYW
Sbjct: 640 RDAKRFHHFKDGGCSCGDYW 659
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 171/365 (46%), Gaps = 44/365 (12%)
Query: 70 LFDQ-IPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGN 128
LF++ + + D+F +N++I + S S ++L+ F + R L P R SF AC +
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSA-EALLAFSSM-RKLSLYPTRSSFPCAIKACSS 88
Query: 129 GLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTM 188
+ G+Q A G S++FV +ALI MY G +E RKVF+ +++ SW +M
Sbjct: 89 LFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSM 148
Query: 189 IAAYVGSGNMSQAKELF-----DEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVG 243
I Y +GN A LF DE + D + F++++
Sbjct: 149 IRGYDLNGNALDAVSLFKDLLVDENDDDDAM--------------FLDSM---------- 184
Query: 244 PKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGE--IES 301
VS ++ACS + A + IHSF+ + + +++D YAK GE +
Sbjct: 185 ------GLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAV 238
Query: 302 ASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKM-KVENVSPNKVTFVALLNAC 360
A ++F + K +V +N+++ +A G +EA +VF+++ K + V+ N +T +L A
Sbjct: 239 ARKIFDQIVDKDRV-SYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAV 297
Query: 361 SHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAI 420
SH + GK ++ G+ ++ ++D+ + G ++ A M +V
Sbjct: 298 SHSGALRIGKCIHDQVIR-MGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMK-NKNVRS 355
Query: 421 WGAVL 425
W A++
Sbjct: 356 WTAMI 360
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 382 bits (980), Expect = e-106, Method: Compositional matrix adjust.
Identities = 218/619 (35%), Positives = 323/619 (52%), Gaps = 48/619 (7%)
Query: 14 SDHCCRL--ASLVDTCKSIQQIK------QTHAQLVTTALISHHVSANKFLKLVAD-ASL 64
++ C RL +L+D ++ +++ Q H+ T SH F+ L + +
Sbjct: 213 NESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKI 272
Query: 65 SYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFG 124
LF + +PD+ YN MI ++ S SL +F+ L SG + V
Sbjct: 273 KMGSALFREFRKPDIVAYNAMIHGYT-SNGETELSLSLFKELML-SGARLRSSTLVSLVP 330
Query: 125 ACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYS 184
G+ + + + + +K S+ V AL +Y K +E RK
Sbjct: 331 VSGHLMLIY---AIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARK------------ 375
Query: 185 WNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGP 244
LFDE E+ + SW+ +I+GY Q G +A+ F M +
Sbjct: 376 -------------------LFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEF 416
Query: 245 KPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASR 304
PN T L+AC+ L AL GKW+H + + + + + ++I MYAKCG I A R
Sbjct: 417 SPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARR 476
Query: 305 VFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGY 364
+F K +V WN MI G+ +HG+ EA+ +F +M ++P VTF+ +L ACSH
Sbjct: 477 LFDLMTKKNEV-TWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAG 535
Query: 365 MVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAV 424
+V+EG F M+ YG P ++HY CMVD+L RAG L+ A I +M + P ++W +
Sbjct: 536 LVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETL 595
Query: 425 LNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTAT 484
L ACRI+KD + + E+DP++VG HVLL NI+S+ + A +R+ ++
Sbjct: 596 LGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAK-KRKL 654
Query: 485 KKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVFGXXXXXXXX 544
K PG + IE+ T + F GD+SHPQ +E+Y L+++ K++ AGY P
Sbjct: 655 AKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPE-TELALHDVE 713
Query: 545 XXXXXTALSVHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRVIIVR 604
+ VHSE+LAIAFGL+ T PGT IRI+KNLRVC DCH VTK ISK+ +RVI+VR
Sbjct: 714 EEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVR 773
Query: 605 DRTRYHHFKDGICSCKDYW 623
D R+HHFKDG+CSC DYW
Sbjct: 774 DANRFHHFKDGVCSCGDYW 792
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 110/490 (22%), Positives = 214/490 (43%), Gaps = 70/490 (14%)
Query: 29 SIQQIKQTHAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIPQPDLFIYNTMIK 87
SI + QTHAQ++ + K + ++D ++ YA +F + +PD+F++N +++
Sbjct: 32 SISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMR 91
Query: 88 AHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGL 147
S++ S + SL VF L + + L PN ++ F A + G + AV G
Sbjct: 92 GFSVNESP-HSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGC 150
Query: 148 DSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDE 207
DS + + + ++ MY K+ VE RKVF D
Sbjct: 151 DSELLLGSNIVKMYFKFWRVEDARKVF-------------------------------DR 179
Query: 208 MQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVG-PKPNEYTFVSALAACSNLVALDQ 266
M E+D + W+T+I+GY + ++E++ F ++ + + T + L A + L L
Sbjct: 180 MPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRL 239
Query: 267 GKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFA 326
G IHS + ++ +L I +Y+KCG+I+ S +F E K + +NAMI G+
Sbjct: 240 GMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFR-KPDIVAYNAMIHGYT 298
Query: 327 MHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACS--------HGYMVEEGKLYF----R 374
+G+ ++ +F+++ + T V+L+ HGY ++ L
Sbjct: 299 SNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVST 358
Query: 375 LMVSDYGIIPEIE---------------HYGCMVDLLSRAGLLKEAEDMISSM---PMAP 416
+ + Y + EIE + M+ ++ GL ++A + M +P
Sbjct: 359 ALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSP 418
Query: 417 DVAIWGAVLNACRIYKDMERGYRIGRIIKEMD-PNHVGCHVLLGNIYSSSGRWNDAR--- 472
+ +L+AC + G + +++ D + + L +Y+ G +AR
Sbjct: 419 NPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLF 478
Query: 473 -MLREKSEIS 481
++ +K+E++
Sbjct: 479 DLMTKKNEVT 488
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 380 bits (975), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/607 (34%), Positives = 338/607 (55%), Gaps = 42/607 (6%)
Query: 22 SLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVADA-SLSYAHKLFDQIPQPDLF 80
++V ++Q++Q HA L+ T K + L A +++Y H LF +P PD F
Sbjct: 14 AIVRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDF 73
Query: 81 IYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRS 140
++N++IK+ S + R+L+ S +SP+ Y+F +C + +++ G+ V
Sbjct: 74 LFNSVIKSTSKLRLPLHCVAYYRRMLS--SNVSPSNYTFTSVIKSCADLSALRIGKGVHC 131
Query: 141 HAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQ 200
HAV G + +V AL+ Y K G+M
Sbjct: 132 HAVVSGFGLDTYVQAALVTFYSK-------------------------------CGDMEG 160
Query: 201 AKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSN 260
A+++FD M E+ +V+W+++++G+ Q G EA+ F++M + G +P+ TFVS L+AC+
Sbjct: 161 ARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQ 220
Query: 261 LVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNA 320
A+ G W+H +I + +N +L ++I++Y++CG++ A VF + + V W A
Sbjct: 221 TGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVF-DKMKETNVAAWTA 279
Query: 321 MIGGFAMHGKPSEAIKVFQKMKVE-NVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSD 379
MI + HG +A+++F KM+ + PN VTFVA+L+AC+H +VEEG+ ++ M
Sbjct: 280 MISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKS 339
Query: 380 YGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPM---APDVAIWGAVLNACRIYKDMER 436
Y +IP +EH+ CMVD+L RAG L EA I + A A+W A+L AC+++++ +
Sbjct: 340 YRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDL 399
Query: 437 GYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELN 496
G I + + ++P++ G HV+L NIY+ SG+ ++ +R+ + K++ G S IE+
Sbjct: 400 GVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQV-GYSVIEVE 458
Query: 497 GTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVFGXXXXXXXXXXXXXTALSVHS 556
Y F +GD SH ++ E+Y +L+ + ++ K GY PV AL HS
Sbjct: 459 NKTYMFSMGDESHQETGEIYRYLETLISRCKEIGYAPV-SEEVMHQVEEEEKEFALRYHS 517
Query: 557 EKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRVIIVRDRTRYHHFKDGI 616
EKLA+AFGLL T I IVKNLR+C DCH K+IS V +R I VRD+ R+HHF++G
Sbjct: 518 EKLAVAFGLLKTVD-VAITIVKNLRICEDCHSAFKYISIVSNRQITVRDKLRFHHFQNGS 576
Query: 617 CSCKDYW 623
CSC DYW
Sbjct: 577 CSCLDYW 583
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 380 bits (975), Expect = e-105, Method: Compositional matrix adjust.
Identities = 220/623 (35%), Positives = 337/623 (54%), Gaps = 42/623 (6%)
Query: 7 TLTKPFHSDHCCRLASLVDTCKSIQQIKQ---THAQLVTTALISHHVSANKFLKLVAD-A 62
TL+ + + SL+ C + H+ + L S +NK + L A+
Sbjct: 237 TLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFG 296
Query: 63 SLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFT 122
L K+FD++ DL +N++IKA+ L+ ++ +F+ + R S + P+ + +
Sbjct: 297 RLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLR-AISLFQEM-RLSRIQPDCLTLISL 354
Query: 123 FGACGNGLSVQEGEQVRSHAVKVG-LDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKD 181
++ V+ ++ G ++ + NA++ MY K GLV+ R V
Sbjct: 355 ASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAV-------- 406
Query: 182 LYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQ 241
F+ + DV+SW+TII+GY Q G EA++ ++ M +
Sbjct: 407 -----------------------FNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEE 443
Query: 242 VGP-KPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIE 300
G N+ T+VS L ACS AL QG +H + + + ++ ++ S+ DMY KCG +E
Sbjct: 444 EGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLE 503
Query: 301 SASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNAC 360
A +F++ V PWN +I HG +A+ +F++M E V P+ +TFV LL+AC
Sbjct: 504 DALSLFYQIPRVNSV-PWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSAC 562
Query: 361 SHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAI 420
SH +V+EG+ F +M +DYGI P ++HYGCMVD+ RAG L+ A I SM + PD +I
Sbjct: 563 SHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASI 622
Query: 421 WGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEI 480
WGA+L+ACR++ +++ G + E++P HVG HVLL N+Y+S+G+W +R +
Sbjct: 623 WGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAH- 681
Query: 481 STATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVFGXXXX 540
+K PG SS+E++ F G+++HP E+Y L + KLK+ GYVP
Sbjct: 682 GKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQ 741
Query: 541 XXXXXXXXXTALSVHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRV 600
+S HSE+LAIAF L+ T T IRI KNLRVC DCH VTKFISK+ +R
Sbjct: 742 DVEDDEKEHILMS-HSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITERE 800
Query: 601 IIVRDRTRYHHFKDGICSCKDYW 623
IIVRD R+HHFK+G+CSC DYW
Sbjct: 801 IIVRDSNRFHHFKNGVCSCGDYW 823
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 120/490 (24%), Positives = 224/490 (45%), Gaps = 77/490 (15%)
Query: 22 SLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIPQPDLF 80
+L C ++Q K HA+LV + I + + K + L +++ A FD I D++
Sbjct: 59 TLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVY 118
Query: 81 IYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRS 140
+N MI + + +S ++ + F L SGL+P+ +F AC +V +G ++
Sbjct: 119 AWNLMISGYGRAGNS-SEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHC 174
Query: 141 HAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQ 200
A+K G +V+V +LI +Y ++ V GN
Sbjct: 175 LALKFGFMWDVYVAASLIHLYSRYKAV----------------------------GN--- 203
Query: 201 AKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSN 260
A+ LFDEM +D+ SW+ +I+GY Q G EAL + + + + T VS L+AC+
Sbjct: 204 ARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTE 259
Query: 261 LVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNA 320
++G IHS+ + ++ + +ID+YA+ G + +VF + R + WN+
Sbjct: 260 AGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVF-DRMYVRDLISWNS 318
Query: 321 MIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVAL---------LNACS--HGYMVEEG 369
+I + ++ +P AI +FQ+M++ + P+ +T ++L + AC G+ + +G
Sbjct: 319 IIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKG 378
Query: 370 -------------KLYFRLMVSD-----YGIIP--EIEHYGCMVDLLSRAGLLKEAEDMI 409
+Y +L + D + +P ++ + ++ ++ G EA +M
Sbjct: 379 WFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMY 438
Query: 410 SSM----PMAPDVAIWGAVLNACRIYKDMERGYRI-GRIIKEMDPNHVGCHVLLGNIYSS 464
+ M +A + W +VL AC + +G ++ GR++K V L ++Y
Sbjct: 439 NIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGK 498
Query: 465 SGRWNDARML 474
GR DA L
Sbjct: 499 CGRLEDALSL 508
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 380 bits (975), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/444 (43%), Positives = 286/444 (64%), Gaps = 6/444 (1%)
Query: 182 LYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQ 241
+Y N+++ Y G+++ A ++FD+M E+D+V+W+++I G+ + G EAL + M
Sbjct: 23 IYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNS 82
Query: 242 VGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIES 301
G KP+ +T VS L+AC+ + AL GK +H ++ + + N ++D+YA+CG +E
Sbjct: 83 KGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEE 142
Query: 302 ASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMK-VENVSPNKVTFVALLNAC 360
A +F E K V W ++I G A++G EAI++F+ M+ E + P ++TFV +L AC
Sbjct: 143 AKTLFDEMVDKNSV-SWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYAC 201
Query: 361 SHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAI 420
SH MV+EG YFR M +Y I P IEH+GCMVDLL+RAG +K+A + I SMPM P+V I
Sbjct: 202 SHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVI 261
Query: 421 WGAVLNACRIYKDMERGYRIGRI-IKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSE 479
W +L AC ++ D + RI I +++PNH G +VLL N+Y+S RW+D + +R K
Sbjct: 262 WRTLLGACTVHGDSDLA-EFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIR-KQM 319
Query: 480 ISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVFGXXX 539
+ KK+PG S +E+ ++FL+GD+SHPQS +Y+ L EMT +L+ GYVP
Sbjct: 320 LRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVY 379
Query: 540 XXXXXXXXXXTALSVHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDR 599
A+ HSEK+AIAF L++T +PI +VKNLRVC DCH K +SKVY+R
Sbjct: 380 VDVEEEEKE-NAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNR 438
Query: 600 VIIVRDRTRYHHFKDGICSCKDYW 623
I+VRDR+R+HHFK+G CSC+DYW
Sbjct: 439 EIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 141/317 (44%), Gaps = 40/317 (12%)
Query: 37 HAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSS 95
H+ ++ + S N L L A+ ++ A+K+FD++P+ DL +N++I + + +
Sbjct: 11 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVI--NGFAENG 68
Query: 96 CNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVN 155
+ + G+ P+ ++ V AC ++ G++V + +KVGL N+ N
Sbjct: 69 KPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSN 128
Query: 156 ALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVS 215
L+ +Y + G VE + +F+ VDK+ SW ++I +G +A ELF M+ +
Sbjct: 129 VLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTE--- 185
Query: 216 WSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQG-KWIHSFI 274
G P E TFV L ACS+ + +G ++
Sbjct: 186 ---------------------------GLLPCEITFVGILYACSHCGMVKEGFEYFRRM- 217
Query: 275 GRGEIKMNERL--LASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPS 332
R E K+ R+ ++D+ A+ G+++ A + V W ++G +HG
Sbjct: 218 -REEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD 276
Query: 333 EAIKVFQKMKVENVSPN 349
A F ++++ + PN
Sbjct: 277 LA--EFARIQILQLEPN 291
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 379 bits (973), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/608 (35%), Positives = 328/608 (53%), Gaps = 40/608 (6%)
Query: 20 LASLVDTCKSIQQIKQTHAQLVTTALISHHVSANK----FLKLVADASLSYAHKLFDQIP 75
L + V +C SI+ + H ++V + H ++ +L+L D A KLFD++P
Sbjct: 37 LIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVC---AEKLFDEMP 93
Query: 76 QPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEG 135
+ DL +N++I +S ++ R++ + G PN +F+ AC G S +EG
Sbjct: 94 ERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEG 153
Query: 136 EQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGS 195
+ +K G+ V VVNA I YGK +
Sbjct: 154 RCIHGLVMKFGVLEEVKVVNAFINWYGK-------------------------------T 182
Query: 196 GNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSAL 255
G+++ + +LF+++ +++VSW+T+I ++Q G + L +F+ +VG +P++ TF++ L
Sbjct: 183 GDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVL 242
Query: 256 AACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKV 315
+C ++ + + IH I G N+ + +++D+Y+K G +E +S VF E + +
Sbjct: 243 RSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSM 302
Query: 316 WPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRL 375
W AM+ +A HG +AIK F+ M +SP+ VTF LLNACSH +VEEGK YF
Sbjct: 303 -AWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFET 361
Query: 376 MVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDME 435
M Y I P ++HY CMVDLL R+GLL++A +I MPM P +WGA+L ACR+YKD +
Sbjct: 362 MSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQ 421
Query: 436 RGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIEL 495
G + + E++P +V+L NIYS+SG W DA +R + + GCS IE
Sbjct: 422 LGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMK-QKGLVRASGCSYIEH 480
Query: 496 NGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVFGXXXXXXXXXXXXXTALSVH 555
++F+VGD SHP+S ++ L E+ K+K ++ H
Sbjct: 481 GNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQH 540
Query: 556 SEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRVIIVRDRTRYHHFKDG 615
SEK+A+AFGLL +P PI I KNLR+C DCH+ K IS + R II+RD R+HHF DG
Sbjct: 541 SEKIAMAFGLLVVSPMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDG 600
Query: 616 ICSCKDYW 623
CSC DYW
Sbjct: 601 SCSCSDYW 608
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 377 bits (968), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/579 (35%), Positives = 328/579 (56%), Gaps = 43/579 (7%)
Query: 52 ANKFLKLVAD-ASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDS 110
A K + + +D S+ YA K+FD+ + ++++N + +A +L+ + L ++ + R
Sbjct: 115 ATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHG-EEVLGLYWKMNR-I 172
Query: 111 GLSPNRYSFVFTFGAC-GNGLSVQ---EGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGL 166
G+ +R+++ + AC + +V +G+++ +H + G S+V+++ L+ MY ++G
Sbjct: 173 GVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGC 232
Query: 167 VEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQV 226
V+Y A+YV F M ++VVSWS +IA Y +
Sbjct: 233 VDY--------------------ASYV-----------FGGMPVRNVVSWSAMIACYAKN 261
Query: 227 GCFMEALDFFHRMLQ--VGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNER 284
G EAL F M++ PN T VS L AC++L AL+QGK IH +I R +
Sbjct: 262 GKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILP 321
Query: 285 LLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVE 344
++++++ MY +CG++E RVF + R V WN++I + +HG +AI++F++M
Sbjct: 322 VISALVTMYGRCGKLEVGQRVF-DRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLAN 380
Query: 345 NVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKE 404
SP VTFV++L ACSH +VEEGK F M D+GI P+IEHY CMVDLL RA L E
Sbjct: 381 GASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDE 440
Query: 405 AEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSS 464
A M+ M P +WG++L +CRI+ ++E R R + ++P + G +VLL +IY+
Sbjct: 441 AAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAE 500
Query: 465 SGRWNDARMLREKSEISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTT 524
+ W++ + +++ E +K+PG +E+ Y F+ D +P ++++FL ++
Sbjct: 501 AQMWDEVKRVKKLLE-HRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAE 559
Query: 525 KLKIAGYVPVFGXXXXXXXXXXXXXTALSVHSEKLAIAFGLLNTAPGTPIRIVKNLRVCR 584
+K GY+P L HSEKLA+AFGL+NT+ G PIRI KNLR+C
Sbjct: 560 DMKEKGYIPQTKGVLYELETEEKERIVLG-HSEKLALAFGLINTSKGEPIRITKNLRLCE 618
Query: 585 DCHQVTKFISKVYDRVIIVRDRTRYHHFKDGICSCKDYW 623
DCH TKFISK ++ I+VRD R+H FK+G+CSC DYW
Sbjct: 619 DCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 179/375 (47%), Gaps = 51/375 (13%)
Query: 86 IKAHSLSPSSCNDSLM--VFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAV 143
I + L S C + + R+L+++S SP++ ++ CG+ S+ + +V H +
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQES--SPSQQTYELLILCCGHRSSLSDALRVHRHIL 104
Query: 144 KVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKE 203
G D + F+ LIGMY G V+Y RKVF+ + +Y WN + A
Sbjct: 105 DNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALT---------- 154
Query: 204 LFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAAC----S 259
+AG+ + E L + +M ++G + + +T+ L AC
Sbjct: 155 ----------------LAGHGE-----EVLGLYWKMNRIGVESDRFTYTYVLKACVASEC 193
Query: 260 NLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWN 319
+ L +GK IH+ + R + ++ +++DMYA+ G ++ AS VF R V W+
Sbjct: 194 TVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPV-RNVVSWS 252
Query: 320 AMIGGFAMHGKPSEAIKVFQKM--KVENVSPNKVTFVALLNACSHGYMVEEGKLY--FRL 375
AMI +A +GK EA++ F++M + ++ SPN VT V++L AC+ +E+GKL + L
Sbjct: 253 AMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYIL 312
Query: 376 MVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDME 435
I+P I +V + R G L+ + + M DV W +++++ Y
Sbjct: 313 RRGLDSILPVI---SALVTMYGRCGKLEVGQRVFDRM-HDRDVVSWNSLISS---YGVHG 365
Query: 436 RGYRIGRIIKEMDPN 450
G + +I +EM N
Sbjct: 366 YGKKAIQIFEEMLAN 380
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 167/355 (47%), Gaps = 38/355 (10%)
Query: 26 TCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIPQPDLFIYNT 84
T + + K+ HA L SH + + A + YA +F +P ++ ++
Sbjct: 194 TVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSA 253
Query: 85 MIKAHSLSPSSCNDSLMVFRLLTRDS-GLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAV 143
MI ++ + + ++L FR + R++ SPN + V AC + ++++G+ + + +
Sbjct: 254 MIACYAKNGKAF-EALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYIL 312
Query: 144 KVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKE 203
+ GLDS + V++AL+ MYG+ G +E G++VF+ D+D+ SWN++I++Y G +A +
Sbjct: 313 RRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQ 372
Query: 204 LFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVA 263
+F+E ML G P TFVS L ACS+
Sbjct: 373 IFEE-------------------------------MLANGASPTPVTFVSVLGACSHEGL 401
Query: 264 LDQGKWIHSFIGRGE-IKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMI 322
+++GK + + R IK A ++D+ + ++ A+++ + + W +++
Sbjct: 402 VEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLL 461
Query: 323 GGFAMHGKPSEAIKVFQKMKVENVSP-NKVTFVALLNACSHGYMVEEGKLYFRLM 376
G +HG A + +++ + P N +V L + + M +E K +L+
Sbjct: 462 GSCRIHGNVELAERASRRLFA--LEPKNAGNYVLLADIYAEAQMWDEVKRVKKLL 514
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/592 (35%), Positives = 328/592 (55%), Gaps = 46/592 (7%)
Query: 32 QIKQTHAQLVTTALISHHVSANKFLKLVADASLSYAHKLFDQIPQPDLFIYNTMIKAHSL 91
+I V+TALI + S N+ +K +A + + FD L +N M+ ++
Sbjct: 445 KINNVSDSFVSTALIDAY-SRNRCMK---EAEILFERHNFD------LVAWNAMMAGYTQ 494
Query: 92 SPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNV 151
S + +L +F L+ + G + ++ F CG ++ +G+QV ++A+K G D ++
Sbjct: 495 SHDG-HKTLKLFALMHK-QGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDL 552
Query: 152 FVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQ 211
+V + ++ M YV G+MS A+ FD +
Sbjct: 553 WVSSGILDM-------------------------------YVKCGDMSAAQFAFDSIPVP 581
Query: 212 DVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIH 271
D V+W+T+I+G ++ G A F +M +G P+E+T + A S L AL+QG+ IH
Sbjct: 582 DDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIH 641
Query: 272 SFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKP 331
+ + + + S++DMYAKCG I+ A +F + + WNAM+ G A HG+
Sbjct: 642 ANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLF-KRIEMMNITAWNAMLVGLAQHGEG 700
Query: 332 SEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGC 391
E +++F++MK + P+KVTF+ +L+ACSH +V E + R M DYGI PEIEHY C
Sbjct: 701 KETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSC 760
Query: 392 MVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNH 451
+ D L RAGL+K+AE++I SM M +++ +L ACR+ D E G R+ + E++P
Sbjct: 761 LADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLD 820
Query: 452 VGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNGTFYQFLVGDRSHPQ 511
+VLL N+Y+++ +W++ ++ R + KK PG S IE+ + F+V DRS+ Q
Sbjct: 821 SSAYVLLSNMYAAASKWDEMKLARTMMK-GHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQ 879
Query: 512 SRELYSFLDEMTTKLKIAGYVPVFGXXXXXXXXXXXXXTALSVHSEKLAIAFGLLNTAPG 571
+ +Y + +M +K GYVP AL HSEKLA+AFGLL+T P
Sbjct: 880 TELIYRKVKDMIRDIKQEGYVPE-TDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPS 938
Query: 572 TPIRIVKNLRVCRDCHQVTKFISKVYDRVIIVRDRTRYHHFKDGICSCKDYW 623
TPIR++KNLRVC DCH K+I+KVY+R I++RD R+H FKDGICSC DYW
Sbjct: 939 TPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 199/438 (45%), Gaps = 53/438 (12%)
Query: 34 KQTHAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIPQPDLFIYNTMIKAHSLS 92
K THA+++T N + + + SL+YA ++FD++P DL +N+++ A++ S
Sbjct: 59 KCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQS 118
Query: 93 PSSC-----NDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGL 147
S C + ++FR+L +D + +R + C + V E +A K+GL
Sbjct: 119 -SECVVENIQQAFLLFRILRQDV-VYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGL 176
Query: 148 DSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVG------------- 194
D + FV AL+ +Y K+G V+ G+ +FE +D+ WN M+ AY+
Sbjct: 177 DGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSA 236
Query: 195 -------------------SGNMSQAKELFDEMQEQDVVSWSTII------AGYVQVGCF 229
SG+ S A ++ D S S II + Y+ G +
Sbjct: 237 FHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQY 296
Query: 230 MEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASI 289
L F M++ + ++ TF+ LA + +L G+ +H + + + + S+
Sbjct: 297 SALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSL 356
Query: 290 IDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPN 349
I+MY K + A VF ++ ++R + WN++I G A +G EA+ +F ++ + P+
Sbjct: 357 INMYCKLRKFGFARTVF-DNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPD 415
Query: 350 KVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHY--GCMVDLLSRAGLLKEAED 407
+ T ++L A S + E L ++ V I + + ++D SR +KEAE
Sbjct: 416 QYTMTSVLKAASS--LPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEI 473
Query: 408 MISSMPMAPDVAIWGAVL 425
+ D+ W A++
Sbjct: 474 LFERHNF--DLVAWNAMM 489
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 152/334 (45%), Gaps = 38/334 (11%)
Query: 109 DSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVE 168
+S + ++ +F+ S+ G+QV A+K+GLD + V N+LI MY K
Sbjct: 308 ESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFG 367
Query: 169 YGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGC 228
+ R VF D M E+D++SW+++IAG Q G
Sbjct: 368 FARTVF-------------------------------DNMSERDLISWNSVIAGIAQNGL 396
Query: 229 FMEALDFFHRMLQVGPKPNEYTFVSALAACSNL-VALDQGKWIHSFIGRGEIKMNERLLA 287
+EA+ F ++L+ G KP++YT S L A S+L L K +H + + +
Sbjct: 397 EVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVST 456
Query: 288 SIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVS 347
++ID Y++ ++ A +F HN + WNAM+ G+ + +K+F M +
Sbjct: 457 ALIDAYSRNRCMKEAEILFERHNF--DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGER 514
Query: 348 PNKVTFVALLNACSHGYMVEEGK-LYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAE 406
+ T + C + + +GK ++ + S Y + ++ ++D+ + G + A+
Sbjct: 515 SDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDL--DLWVSSGILDMYVKCGDMSAAQ 572
Query: 407 DMISSMPMAPDVAIWGAVLNACRIYKDMERGYRI 440
S+P+ DVA W +++ C + ER + +
Sbjct: 573 FAFDSIPVPDDVA-WTTMISGCIENGEEERAFHV 605
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 147/362 (40%), Gaps = 39/362 (10%)
Query: 20 LASLVDTCK---SIQQIKQTHAQLVTTAL-ISHHVSANKFLKLVADASLSYAHKLFDQIP 75
LA++ TC +I Q KQ HA + + + VS+ V +S A FD IP
Sbjct: 520 LATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIP 579
Query: 76 QPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEG 135
PD + TMI + + VF + R G+ P+ ++ A ++++G
Sbjct: 580 VPDDVAWTTMISG-CIENGEEERAFHVFSQM-RLMGVLPDEFTIATLAKASSCLTALEQG 637
Query: 136 EQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGS 195
Q+ ++A+K+ ++ FV +L+ MY K G ++ +F+ ++ +WN M
Sbjct: 638 RQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAM------- 690
Query: 196 GNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSAL 255
+ G Q G E L F +M +G KP++ TF+ L
Sbjct: 691 ------------------------LVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVL 726
Query: 256 AACSNLVALDQG-KWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRK 314
+ACS+ + + K + S G IK + + D + G ++ A + + +
Sbjct: 727 SACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEAS 786
Query: 315 VWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFR 374
+ ++ + G +V K+ +E + +V L N + +E KL
Sbjct: 787 ASMYRTLLAACRVQGDTETGKRVATKL-LELEPLDSSAYVLLSNMYAAASKWDEMKLART 845
Query: 375 LM 376
+M
Sbjct: 846 MM 847
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 8/166 (4%)
Query: 267 GKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFA 326
GK H+ I E L+ ++I MY+KCG + A RVF + R + WN+++ +A
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVF-DKMPDRDLVSWNSILAAYA 116
Query: 327 MHGK-----PSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYG 381
+ +A +F+ ++ + V +++T +L C H V + F G
Sbjct: 117 QSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASE-SFHGYACKIG 175
Query: 382 IIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNA 427
+ + G +V++ + G +KE + + MP DV +W +L A
Sbjct: 176 LDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPY-RDVVLWNLMLKA 220
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 370 bits (949), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/561 (35%), Positives = 312/561 (55%), Gaps = 44/561 (7%)
Query: 67 AHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGAC 126
A ++FD + + L +NTMI ++ + +++L +F L R+ G + ++ AC
Sbjct: 115 ARQVFDGMLERSLVSWNTMIGLYTRNRME-SEALDIF-LEMRNEGFKFSEFTISSVLSAC 172
Query: 127 GNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWN 186
G E +++ +VK +D N++V AL+ +Y K
Sbjct: 173 GVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAK----------------------- 209
Query: 187 TMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKP 246
G + A ++F+ MQ++ V+WS+++AGYVQ + EAL + R ++ +
Sbjct: 210 --------CGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQ 261
Query: 247 NEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVF 306
N++T S + ACSNL AL +GK +H+ I + N + +S +DMYAKCG + + +F
Sbjct: 262 NQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIF 321
Query: 307 WEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMV 366
E K + WN +I GFA H +P E + +F+KM+ + + PN+VTF +LL+ C H +V
Sbjct: 322 SEVQEK-NLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLV 380
Query: 367 EEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLN 426
EEG+ +F+LM + YG+ P + HY CMVD+L RAGLL EA ++I S+P P +IWG++L
Sbjct: 381 EEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLA 440
Query: 427 ACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDA----RMLREKSEIST 482
+CR+YK++E + E++P + G HVLL NIY+++ +W + ++LR+
Sbjct: 441 SCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRD-----C 495
Query: 483 ATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVFGXXXXXX 542
KK+ G S I++ + F VG+ HP+ RE+ S LD + K + GY P
Sbjct: 496 DVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSV-EHELHD 554
Query: 543 XXXXXXXTALSVHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRVII 602
L HSEKLA+ FGL+ +P+RI+KNLR+C DCH+ K S R II
Sbjct: 555 VEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFII 614
Query: 603 VRDRTRYHHFKDGICSCKDYW 623
VRD R+HHF DG CSC D+W
Sbjct: 615 VRDVNRFHHFSDGHCSCGDFW 635
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 167/360 (46%), Gaps = 47/360 (13%)
Query: 80 FIYNTMIKAHSLSPSSCNDSLM--VFRLLTRDSG-LSPNRYSFVFT--------FGACGN 128
F N +I+ L S SL + L + D +SP RYS F+ C
Sbjct: 14 FTVNFLIRCKVLPRRSNTSSLSRNISVLASYDQEEVSPGRYSNEFSNRNLVHEILQLCAR 73
Query: 129 GLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTM 188
+V E + +++ L+ +V ++N LI Y K G VE R+VF+ +++ L SWNTM
Sbjct: 74 NGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTM 133
Query: 189 IAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNE 248
I Y + S+A ++F EM+ + G K +E
Sbjct: 134 IGLYTRNRMESEALDIFLEMRNE-------------------------------GFKFSE 162
Query: 249 YTFVSALAACS-NLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFW 307
+T S L+AC N AL+ K +H + I +N + +++D+YAKCG I+ A +VF
Sbjct: 163 FTISSVLSACGVNCDALECKK-LHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFE 221
Query: 308 EHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVE 367
K V W++M+ G+ + EA+ ++++ + ++ N+ T +++ ACS+ +
Sbjct: 222 SMQDKSSV-TWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALI 280
Query: 368 EGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNA 427
EGK ++ G + VD+ ++ G L+E+ +I S ++ +W +++
Sbjct: 281 EGK-QMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESY-IIFSEVQEKNLELWNTIISG 338
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 104/222 (46%), Gaps = 8/222 (3%)
Query: 32 QIKQTHAQLVTTALISHHVSANKFLKLVADASL-SYAHKLFDQIPQPDLFIYNTMIKAHS 90
+ K+ H V T + + L L A + A ++F+ + +++M+ +
Sbjct: 180 ECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGY- 238
Query: 91 LSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSN 150
+ + ++L+++R R S L N+++ AC N ++ EG+Q+ + K G SN
Sbjct: 239 VQNKNYEEALLLYRRAQRMS-LEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSN 297
Query: 151 VFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQE 210
VFV ++ + MY K G + +F +K+L WNT+I+ + + LF++MQ+
Sbjct: 298 VFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQ 357
Query: 211 QDV----VSWSTIIAGYVQVGCFMEALDFFHRMLQV-GPKPN 247
+ V++S++++ G E FF M G PN
Sbjct: 358 DGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPN 399
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 370 bits (949), Expect = e-102, Method: Compositional matrix adjust.
Identities = 222/615 (36%), Positives = 326/615 (53%), Gaps = 50/615 (8%)
Query: 20 LASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVADA---SLSYAHKLFDQIPQ 76
+ +++ C S QIKQ + +T ++ L+ A + LS+A ++F IP+
Sbjct: 6 METMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPK 65
Query: 77 PDLFIYNTMIK--AHSLSPSSCND--SLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSV 132
P +N +I+ A S PS M+ + + + + + FT AC L
Sbjct: 66 PLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCS 125
Query: 133 QEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAY 192
+Q+ + GL ++ + L+ Y K
Sbjct: 126 SAMDQLHCQINRRGLSADSLLCTTLLDAYSK----------------------------- 156
Query: 193 VGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFV 252
+G++ A +LFDEM +DV SW+ +IAG V EA++ + RM G + +E T V
Sbjct: 157 --NGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVV 214
Query: 253 SALAACSNLVALDQGKWI-HSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNA 311
+AL ACS+L + +G+ I H + I N + IDMY+KCG ++ A +VF +
Sbjct: 215 AALGACSHLGDVKEGENIFHGYSNDNVIVSN-----AAIDMYSKCGFVDKAYQVFEQFTG 269
Query: 312 KRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKL 371
K+ V WN MI GFA+HG+ A+++F K++ + P+ V+++A L AC H +VE G
Sbjct: 270 KKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLS 329
Query: 372 YFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIY 431
F M G+ ++HYGC+VDLLSRAG L+EA D+I SM M PD +W ++L A IY
Sbjct: 330 VFNNMACK-GVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIY 388
Query: 432 KDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCS 491
D+E R IKEM N+ G VLL N+Y++ GRW D +R+ E S KKIPG S
Sbjct: 389 SDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDME-SKQVKKIPGLS 447
Query: 492 SIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVFGXXXXXXXXXXXXXTA 551
IE GT ++F D+SH Q RE+Y +DE+ K++ GYV G A
Sbjct: 448 YIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIREDGYVAQTG-LVLHDIGEEEKENA 506
Query: 552 LSVHSEKLAIAFGLL---NTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRVIIVRDRTR 608
L HSEKLA+A+GL+ +P+R++ NLR+C DCH V K ISK+Y R IIVRDR R
Sbjct: 507 LCYHSEKLAVAYGLMMMDGADEESPVRVINNLRICGDCHVVFKHISKIYKREIIVRDRVR 566
Query: 609 YHHFKDGICSCKDYW 623
+H FKDG CSC+D+W
Sbjct: 567 FHRFKDGSCSCRDFW 581
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/576 (34%), Positives = 322/576 (55%), Gaps = 13/576 (2%)
Query: 53 NKFLKLVADASLSYAHKLFDQIPQPDLFIYNTMIKAHS-LSPSSCNDSLMVFRLLTRDSG 111
N + KL+ S +FD++PQ + +KA + + P + VF ++ R
Sbjct: 148 NMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDV 207
Query: 112 LSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGR 171
+S N G +G+ VR L + F +++++ ++ ++ V G+
Sbjct: 208 VSYN----TIIAGYAQSGMYEDALRMVREMGT-TDLKPDSFTLSSVLPIFSEYVDVIKGK 262
Query: 172 KVFEW----AVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVG 227
++ + +D D+Y ++++ Y S + ++ +F + +D +SW++++AGYVQ G
Sbjct: 263 EIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNG 322
Query: 228 CFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLA 287
+ EAL F +M+ KP F S + AC++L L GK +H ++ RG N + +
Sbjct: 323 RYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIAS 382
Query: 288 SIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVS 347
+++DMY+KCG I++A ++F N +V W A+I G A+HG EA+ +F++MK + V
Sbjct: 383 ALVDMYSKCGNIKAARKIFDRMNVLDEV-SWTAIIMGHALHGHGHEAVSLFEEMKRQGVK 441
Query: 348 PNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAED 407
PN+V FVA+L ACSH +V+E YF M YG+ E+EHY + DLL RAG L+EA +
Sbjct: 442 PNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYN 501
Query: 408 MISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGR 467
IS M + P ++W +L++C ++K++E ++ I +D ++G +VL+ N+Y+S+GR
Sbjct: 502 FISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGR 561
Query: 468 WNDARMLREKSEISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLK 527
W + LR + +K P CS IE+ + F+ GDRSHP ++ FL + +++
Sbjct: 562 WKEMAKLRLRMR-KKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQME 620
Query: 528 IAGYVPVFGXXXXXXXXXXXXXTALSVHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCH 587
GYV HSE+LA+AFG++NT PGT IR+ KN+R+C DCH
Sbjct: 621 KEGYVADTSGVLHDVDEEHKRELLFG-HSERLAVAFGIINTEPGTTIRVTKNIRICTDCH 679
Query: 588 QVTKFISKVYDRVIIVRDRTRYHHFKDGICSCKDYW 623
KFISK+ +R IIVRD +R+HHF G CSC DYW
Sbjct: 680 VAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 120/428 (28%), Positives = 214/428 (50%), Gaps = 28/428 (6%)
Query: 28 KSIQQIKQTHAQLVTTALISHHVSANKFLKLVADASLSYAHKL-FDQIPQPDLFIYNTMI 86
KS Q KQ HAQ + T +SH SA+ + + + L + L F + P + + ++I
Sbjct: 19 KSKSQAKQLHAQFIRTQSLSH-TSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVI 77
Query: 87 KAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVG 146
+ + S + +L F + R SG P+ F +C + ++ GE V V++G
Sbjct: 78 RCFT-DQSLFSKALASF-VEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLG 135
Query: 147 LDSNVFVVNALIGMYGKWGLVEYGRK-----VFEWAVDKDLYSWNTMIAAY--VGSGNMS 199
+D +++ NAL+ MY K L+ G K VF+ + S + + A + +
Sbjct: 136 MDCDLYTGNALMNMYAK--LLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGID 193
Query: 200 QAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACS 259
+ +F+ M +DVVS++TIIAGY Q G + +AL M KP+ +T S L S
Sbjct: 194 SVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFS 253
Query: 260 NLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWN 319
V + +GK IH ++ R I + + +S++DMYAK IE + RVF + + WN
Sbjct: 254 EYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGI-SWN 312
Query: 320 AMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGK-LYFRLMVS 378
+++ G+ +G+ +EA+++F++M V P V F +++ AC+H + GK L+ ++
Sbjct: 313 SLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRG 372
Query: 379 DYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVL----------NAC 428
+G I +VD+ S+ G +K A + M + +V+ W A++ A
Sbjct: 373 GFG--SNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVS-WTAIIMGHALHGHGHEAV 429
Query: 429 RIYKDMER 436
++++M+R
Sbjct: 430 SLFEEMKR 437
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 368 bits (944), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/608 (34%), Positives = 334/608 (54%), Gaps = 44/608 (7%)
Query: 23 LVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVA-----DASLSYAHKLFDQIPQP 77
L+ C +I + KQ HA+ + +L + + + S++YA +F I P
Sbjct: 36 LLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDP 95
Query: 78 DLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQ 137
F +NTMI+ + ++ S ++L + + + G P+ +++ AC S++EG+Q
Sbjct: 96 CTFDFNTMIRGY-VNVMSFEEALCFYNEMMQ-RGNEPDNFTYPCLLKACTRLKSIREGKQ 153
Query: 138 VRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGN 197
+ K+GL+++VFV N++I Y G
Sbjct: 154 IHGQVFKLGLEADVFV-------------------------------QNSLINMYGRCGE 182
Query: 198 MSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRML-QVGPKPNEYTFVSALA 256
M + +F++++ + SWS++++ +G + E L F M + K E VSAL
Sbjct: 183 MELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALL 242
Query: 257 ACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVW 316
AC+N AL+ G IH F+ R ++N + S++DMY KCG ++ A +F + KR
Sbjct: 243 ACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIF-QKMEKRNNL 301
Query: 317 PWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLM 376
++AMI G A+HG+ A+++F KM E + P+ V +V++LNACSH +V+EG+ F M
Sbjct: 302 TYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEM 361
Query: 377 VSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMER 436
+ + + P EHYGC+VDLL RAGLL+EA + I S+P+ + IW L+ CR+ +++E
Sbjct: 362 LKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIEL 421
Query: 437 GYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEIS-TATKKIPGCSSIEL 495
G + + ++ ++ G ++L+ N+YS W+D + R ++EI+ K+ PG S +EL
Sbjct: 422 GQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDD--VARTRTEIAIKGLKQTPGFSIVEL 479
Query: 496 NGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVFGXXXXXXXXXXXXXTALSVH 555
G ++F+ DRSHP+ +E+Y L +M +LK GY P L H
Sbjct: 480 KGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGYSPDL-TQILLNVDEEEKKERLKGH 538
Query: 556 SEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRVIIVRDRTRYHHFKDG 615
S+K+AIAFGLL T PG+ I+I +NLR+C DCH TK IS +Y+R I+VRDR R+H FK G
Sbjct: 539 SQKVAIAFGLLYTPPGSIIKIARNLRMCSDCHTYTKKISMIYEREIVVRDRNRFHLFKGG 598
Query: 616 ICSCKDYW 623
CSCKDYW
Sbjct: 599 TCSCKDYW 606
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 366 bits (940), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/586 (35%), Positives = 315/586 (53%), Gaps = 38/586 (6%)
Query: 40 LVTTALISHHVSANKFLKLVADAS--LSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCN 97
LV +H V+A L + S L+ AHKLFD+IP + + + ++ S
Sbjct: 136 LVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRH-R 194
Query: 98 DSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNAL 157
+++ +F+ + + G+ P+ Y V AC + + GE + + ++ + N FV L
Sbjct: 195 EAIDLFKKMV-EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTL 253
Query: 158 IGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWS 217
+ +Y K G M +A+ +FD M E+D+V+WS
Sbjct: 254 VNLYAK-------------------------------CGKMEKARSVFDSMVEKDIVTWS 282
Query: 218 TIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRG 277
T+I GY E ++ F +MLQ KP++++ V L++C++L ALD G+W S I R
Sbjct: 283 TMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRH 342
Query: 278 EIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKV 337
E N + ++IDMYAKCG + VF E K V NA I G A +G + V
Sbjct: 343 EFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIV-IMNAAISGLAKNGHVKLSFAV 401
Query: 338 FQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLS 397
F + + +SP+ TF+ LL C H ++++G +F + Y + +EHYGCMVDL
Sbjct: 402 FGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWG 461
Query: 398 RAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVL 457
RAG+L +A +I MPM P+ +WGA+L+ CR+ KD + + + + ++P + G +V
Sbjct: 462 RAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQ 521
Query: 458 LGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYS 517
L NIYS GRW++A +R+ KKIPG S IEL G ++FL D+SHP S ++Y+
Sbjct: 522 LSNIYSVGGRWDEAAEVRDMMN-KKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYA 580
Query: 518 FLDEMTTKLKIAGYVPVFGXXXXXXXXXXXXXTALSVHSEKLAIAFGLLNTAPGTPIRIV 577
L+++ ++++ G+VP L HSEKLA+A GL++T G IR+V
Sbjct: 581 KLEDLGNEMRLMGFVPT-TEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVV 639
Query: 578 KNLRVCRDCHQVTKFISKVYDRVIIVRDRTRYHHFKDGICSCKDYW 623
KNLRVC DCH+V K ISK+ R I+VRD R+H F +G CSC DYW
Sbjct: 640 KNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/428 (23%), Positives = 206/428 (48%), Gaps = 47/428 (10%)
Query: 6 STLTKPFHSDHCCRLASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFL-KLVADASL 64
S +T P + ++ +L+ ++ +KQ H +LI+HH+ + FL L+ +L
Sbjct: 2 SIVTVPSATSKVQQIKTLISVACTVNHLKQIH-----VSLINHHLHHDTFLVNLLLKRTL 56
Query: 65 -----SYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSF 119
Y++ LF P++F+YN++I ++ +++L +F L R GL + ++F
Sbjct: 57 FFRQTKYSYLLFSHTQFPNIFLYNSLINGF-VNNHLFHETLDLF-LSIRKHGLYLHGFTF 114
Query: 120 VFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVD 179
AC S + G + S VK G + +V + +L+ +Y G + K+F+ D
Sbjct: 115 PLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPD 174
Query: 180 KDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRM 239
+ + +W + + Y SG +A +D F +M
Sbjct: 175 RSVVTWTALFSGYTTSGRHREA-------------------------------IDLFKKM 203
Query: 240 LQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEI 299
+++G KP+ Y V L+AC ++ LD G+WI ++ E++ N + +++++YAKCG++
Sbjct: 204 VEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKM 263
Query: 300 ESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNA 359
E A VF + ++ + W+ MI G+A + P E I++F +M EN+ P++ + V L++
Sbjct: 264 EKARSVF-DSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSS 322
Query: 360 CSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVA 419
C+ ++ G+ L + + + + ++D+ ++ G + ++ M D+
Sbjct: 323 CASLGALDLGEWGISL-IDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMK-EKDIV 380
Query: 420 IWGAVLNA 427
I A ++
Sbjct: 381 IMNAAISG 388
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 365 bits (937), Expect = e-101, Method: Compositional matrix adjust.
Identities = 210/610 (34%), Positives = 325/610 (53%), Gaps = 42/610 (6%)
Query: 20 LASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVA---DASLSYAHKLFDQI-P 75
+ ++ C S++++++ H+ ++ L H N L+ A SLS+A LFD
Sbjct: 8 IVRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDS 67
Query: 76 QPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEG 135
P +N +I+ S S S N L R+L S P+ ++F F +C S+ +
Sbjct: 68 DPSTSDWNYLIRGFSNSSSPLNSILFYNRMLL-SSVSRPDLFTFNFALKSCERIKSIPKC 126
Query: 136 EQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGS 195
++ ++ G + V +L+ Y G VE KV
Sbjct: 127 LEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKV---------------------- 164
Query: 196 GNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSAL 255
FDEM +D+VSW+ +I + VG +AL + RM G + YT V+ L
Sbjct: 165 ---------FDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALL 215
Query: 256 AACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKV 315
++C+++ AL+ G +H + + ++IDMYAKCG +E+A VF KR V
Sbjct: 216 SSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVF-NGMRKRDV 274
Query: 316 WPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRL 375
WN+MI G+ +HG EAI F+KM V PN +TF+ LL CSH +V+EG +F +
Sbjct: 275 LTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEI 334
Query: 376 MVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDME 435
M S + + P ++HYGCMVDL RAG L+ + +MI + D +W +L +C+I++++E
Sbjct: 335 MSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLE 394
Query: 436 RGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEI--STATKKIPGCSSI 493
G + + +++ + G +VL+ +IYS++ NDA+ ++ S + +PG S I
Sbjct: 395 LGEVAMKKLVQLEAFNAGDYVLMTSIYSAA---NDAQAFASMRKLIRSHDLQTVPGWSWI 451
Query: 494 ELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVFGXXXXXXXXXXXXXTALS 553
E+ ++F+V D+ HP+S +YS L E+ + +AGY P +A +
Sbjct: 452 EIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILAGYKPEDSNRTAPTLSDRCLGSADT 511
Query: 554 VHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRVIIVRDRTRYHHFK 613
HSEKLAIA+GL+ T GT +RI KNLRVCRDCH TK++SK ++R IIVRDR R+HHF
Sbjct: 512 SHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHSFTKYVSKAFNREIIVRDRVRFHHFA 571
Query: 614 DGICSCKDYW 623
DGICSC DYW
Sbjct: 572 DGICSCNDYW 581
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 364 bits (934), Expect = e-100, Method: Compositional matrix adjust.
Identities = 213/622 (34%), Positives = 334/622 (53%), Gaps = 54/622 (8%)
Query: 20 LASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFL-KLVAD-----ASLSYAHKLFDQ 73
++S++ C ++ ++ T +L AL + + N F+ + D + ++FD
Sbjct: 305 ISSVLPACSHLEMLR-TGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDG 363
Query: 74 IPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQ 133
+ + ++N MI +S + ++L++F + +GL N + AC +
Sbjct: 364 MFDRKIGLWNAMIAGYSQNEHD-KEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFS 422
Query: 134 EGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYV 193
E + VK GLD + FV NT++ Y
Sbjct: 423 RKEAIHGFVVKRGLDRDRFV-------------------------------QNTLMDMYS 451
Query: 194 GSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRML-----------QV 242
G + A +F +M+++D+V+W+T+I GYV +AL H+M +V
Sbjct: 452 RLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRV 511
Query: 243 GPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESA 302
KPN T ++ L +C+ L AL +GK IH++ + + + + ++++DMYAKCG ++ +
Sbjct: 512 SLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMS 571
Query: 303 SRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSH 362
+VF + ++ V WN +I + MHG EAI + + M V+ V PN+VTF+++ ACSH
Sbjct: 572 RKVF-DQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSH 630
Query: 363 GYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVA-IW 421
MV+EG F +M DYG+ P +HY C+VDLL RAG +KEA +++ MP + A W
Sbjct: 631 SGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAW 690
Query: 422 GAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEIS 481
++L A RI+ ++E G + + +++PN +VLL NIYSS+G W+ A +R +
Sbjct: 691 SSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMK-E 749
Query: 482 TATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVFGXXXXX 541
+K PGCS IE ++F+ GD SHPQS +L +L+ + +++ GYVP
Sbjct: 750 QGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPD-TSCVLH 808
Query: 542 XXXXXXXXTALSVHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRVI 601
L HSEKLAIAFG+LNT+PGT IR+ KNLRVC DCH TKFISK+ DR I
Sbjct: 809 NVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREI 868
Query: 602 IVRDRTRYHHFKDGICSCKDYW 623
I+RD R+H FK+G CSC DYW
Sbjct: 869 ILRDVRRFHRFKNGTCSCGDYW 890
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 166/355 (46%), Gaps = 55/355 (15%)
Query: 34 KQTHAQLVTTALISHHVS-ANKFLKLVAD-ASLSYAHKLFDQIPQPDLFIYNTMIKAHSL 91
KQ HA + V+ AN + L +K+FD+I + + +N++I +
Sbjct: 117 KQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLC- 175
Query: 92 SPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEG----EQVRSHAVKVGL 147
S +L FR + D + P+ ++ V AC N L + EG +QV ++ ++ G
Sbjct: 176 SFEKWEMALEAFRCML-DENVEPSSFTLVSVVTACSN-LPMPEGLMMGKQVHAYGLRKG- 232
Query: 148 DSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDE 207
+ N F++N L+ MYGK G ++ +K L
Sbjct: 233 ELNSFIINTLVAMYGKL-------------------------------GKLASSKVLLGS 261
Query: 208 MQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQG 267
+D+V+W+T+++ Q +EAL++ M+ G +P+E+T S L ACS+L L G
Sbjct: 262 FGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTG 321
Query: 268 KWIHSF-IGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFA 326
K +H++ + G + N + ++++DMY C ++ S RVF + RK+ WNAMI G++
Sbjct: 322 KELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVF-DGMFDRKIGLWNAMIAGYS 380
Query: 327 MHGKPSEAIKVFQKMKVE-NVSPNKVTFVALLNACS-----------HGYMVEEG 369
+ EA+ +F M+ + N T ++ AC HG++V+ G
Sbjct: 381 QNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRG 435
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 133/266 (50%), Gaps = 41/266 (15%)
Query: 111 GLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVG--LDSNVFVVNALIGMYGKWGLVE 168
G+ P+ Y+F A + ++ G+Q+ +H K G +DS V V N L+ +Y K G +
Sbjct: 92 GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDS-VTVANTLVNLYRKCG--D 148
Query: 169 YGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGC 228
+G A Y ++FD + E++ VSW+++I+
Sbjct: 149 FG-------------------AVY----------KVFDRISERNQVSWNSLISSLCSFEK 179
Query: 229 FMEALDFFHRMLQVGPKPNEYTFVSALAACSNLV---ALDQGKWIHSF-IGRGEIKMNER 284
+ AL+ F ML +P+ +T VS + ACSNL L GK +H++ + +GE +N
Sbjct: 180 WEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGE--LNSF 237
Query: 285 LLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVE 344
++ +++ MY K G++ S S+V R + WN ++ + + EA++ ++M +E
Sbjct: 238 IINTLVAMYGKLGKLAS-SKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLE 296
Query: 345 NVSPNKVTFVALLNACSHGYMVEEGK 370
V P++ T ++L ACSH M+ GK
Sbjct: 297 GVEPDEFTISSVLPACSHLEMLRTGK 322
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 109/216 (50%), Gaps = 8/216 (3%)
Query: 216 WSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIG 275
W ++ V+ EA+ + M+ +G KP+ Y F + L A ++L ++ GK IH+ +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 276 RGEIKMNERLLA-SIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEA 334
+ ++ +A +++++Y KCG+ + +VF + ++R WN++I K A
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVF-DRISERNQVSWNSLISSLCSFEKWEMA 183
Query: 335 IKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIP-EIEHY--GC 391
++ F+ M ENV P+ T V+++ ACS+ M E L V YG+ E+ +
Sbjct: 184 LEAFRCMLDENVEPSSFTLVSVVTACSNLPMPE--GLMMGKQVHAYGLRKGELNSFIINT 241
Query: 392 MVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNA 427
+V + + G L ++ ++ S D+ W VL++
Sbjct: 242 LVAMYGKLGKLASSKVLLGSFG-GRDLVTWNTVLSS 276
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 364 bits (934), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/492 (39%), Positives = 297/492 (60%), Gaps = 13/492 (2%)
Query: 137 QVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEW--AVDKDLYSWNTMIAAYVG 194
Q + K+G + ++ + + Y + R++ W ++ + + N +I + +
Sbjct: 51 QAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRLLLWFLSLSPGVCNINLIIESLMK 110
Query: 195 SGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGP-KPNEYTFVS 253
G AK++ +Q+V++W+ +I GYV+ + EAL ML KPN+++F S
Sbjct: 111 IGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFAS 170
Query: 254 ALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKR 313
+LAAC+ L L KW+HS + I++N L ++++D+YAKCG+I ++ VF+ + KR
Sbjct: 171 SLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFY--SVKR 228
Query: 314 K-VWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLY 372
V WNAMI GFA HG +EAI+VF +M+ E+VSP+ +TF+ LL CSH ++EEGK Y
Sbjct: 229 NDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEY 288
Query: 373 FRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYK 432
F LM + I P++EHYG MVDLL RAG +KEA ++I SMP+ PDV IW ++L++ R YK
Sbjct: 289 FGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYK 348
Query: 433 DMERGYRIGRI-IKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCS 491
+ E +G I I+ + G +VLL NIYSS+ +W A+ +RE +K G S
Sbjct: 349 NPE----LGEIAIQNLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMS-KEGIRKAKGKS 403
Query: 492 SIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVFGXXXXXXXXXXXXXTA 551
+E G ++F GD SH +++ +Y L+ + K K G+V
Sbjct: 404 WLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEEEKEEN- 462
Query: 552 LSVHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRVIIVRDRTRYHH 611
L+ HSEKLA+A+ +L ++PGT IRI KN+R+C DCH K +SK+ +RVII+RDR R+H
Sbjct: 463 LNYHSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRIRFHR 522
Query: 612 FKDGICSCKDYW 623
F+DG+CSC+DYW
Sbjct: 523 FEDGLCSCRDYW 534
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/317 (19%), Positives = 123/317 (38%), Gaps = 38/317 (11%)
Query: 67 AHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGAC 126
A K+ ++ +N MI + + ++L + + + + PN++SF + AC
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGY-VRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAAC 175
Query: 127 GNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWN 186
+ + V S + G++ N + +AL+ +Y K G + R+VF D+ WN
Sbjct: 176 ARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWN 235
Query: 187 TMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKP 246
MI + G ++A +F EM+ + V P
Sbjct: 236 AMITGFATHGLATEAIRVFSEMEAEHV-------------------------------SP 264
Query: 247 NEYTFVSALAACSNLVALDQGKWIHSFIGRG-EIKMNERLLASIIDMYAKCGEIESASRV 305
+ TF+ L CS+ L++GK + R I+ +++D+ + G ++ A +
Sbjct: 265 DSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYEL 324
Query: 306 FWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYM 365
+ V W +++ + P ++ ++N+S K LL+
Sbjct: 325 IESMPIEPDVVIWRSLLSSSRTYKNPE-----LGEIAIQNLSKAKSGDYVLLSNIYSSTK 379
Query: 366 VEEGKLYFRLMVSDYGI 382
E R ++S GI
Sbjct: 380 KWESAQKVRELMSKEGI 396
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 362 bits (930), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/615 (32%), Positives = 335/615 (54%), Gaps = 20/615 (3%)
Query: 20 LASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVADASLS---YAHKLFDQIPQ 76
L S +D C ++ QIKQ H ++ L K ++ + + YA ++ + +
Sbjct: 52 LISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQF 111
Query: 77 PDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGE 136
+ F++ +I+ +++ ++++ ++ + R ++P ++F ACG + G
Sbjct: 112 RNPFLWTAVIRGYAIE-GKFDEAIAMYGCM-RKEEITPVSFTFSALLKACGTMKDLNLGR 169
Query: 137 QVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSG 196
Q + ++ V+V N +I MY K ++ RKVF+ ++D+ SW +IAAY G
Sbjct: 170 QFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVG 229
Query: 197 NMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALA 256
NM A ELF+ + +D+V+W+ ++ G+ Q EAL++F RM + G + +E T ++
Sbjct: 230 NMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYIS 289
Query: 257 ACSNLVALDQGKWIHSFIGRGEIKMNERLL--ASIIDMYAKCGEIESASRVFWEHNAKRK 314
AC+ L A + ++ ++ +++IDMY+KCG +E A VF N K
Sbjct: 290 ACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNK-N 348
Query: 315 VWPWNAMIGGFAMHGKPSEAIKVFQKMKVEN-VSPNKVTFVALLNACSHGYMVEEGKLYF 373
V+ +++MI G A HG+ EA+ +F M + + PN VTFV L ACSH +V++G+ F
Sbjct: 349 VFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVF 408
Query: 374 RLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKD 433
M +G+ P +HY CMVDLL R G L+EA ++I +M + P +WGA+L ACRI+ +
Sbjct: 409 DSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNN 468
Query: 434 MERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDA----RMLREKSEISTATKKIPG 489
E + E++P+ +G ++LL N+Y+S+G W ++++EK KK P
Sbjct: 469 PEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEK-----GLKKTPA 523
Query: 490 CS-SIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVFGXXXXXXXXXXXX 548
S ++ NG ++F G+ +HP S ++ L+E+ +L + GY P
Sbjct: 524 VSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKR 583
Query: 549 XTALSVHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRVIIVRDRTR 608
+ H+EKLA+AF LL T + I I+KNLR+C DCH+ + S+V +VII+RD R
Sbjct: 584 LILIQ-HTEKLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMR 642
Query: 609 YHHFKDGICSCKDYW 623
+HHF+ G CSC D+W
Sbjct: 643 FHHFRSGDCSCGDFW 657
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 360 bits (925), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 203/607 (33%), Positives = 334/607 (55%), Gaps = 43/607 (7%)
Query: 23 LVDTCKSIQQIKQ---THAQLVTTALISHHVSANKFLKLVADAS-LSYAHKLFDQIPQPD 78
L+ C + ++ HAQ+ + N + L A L A +F+ +P P+
Sbjct: 125 LLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPE 184
Query: 79 LFIYN-TMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQ 137
I + T I + ++L +F + R + P+ + V A +++G
Sbjct: 185 RTIVSWTAIVSAYAQNGEPMEALEIFSQM-RKMDVKPDWVALVSVLNAFTCLQDLKQGRS 243
Query: 138 VRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLY-SWNTMIAAYVGSG 196
+ + VK+GL+ ++ DL S NTM Y G
Sbjct: 244 IHASVVKMGLE-----------------------------IEPDLLISLNTM---YAKCG 271
Query: 197 NMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALA 256
++ AK LFD+M+ +++ W+ +I+GY + G EA+D FH M+ +P+ + SA++
Sbjct: 272 QVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAIS 331
Query: 257 ACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVW 316
AC+ + +L+Q + ++ ++GR + + + + +++IDM+AKCG +E A VF + R V
Sbjct: 332 ACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVF-DRTLDRDVV 390
Query: 317 PWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLM 376
W+AMI G+ +HG+ EAI +++ M+ V PN VTF+ LL AC+H MV EG +F M
Sbjct: 391 VWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM 450
Query: 377 VSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMER 436
+D+ I P+ +HY C++DLL RAG L +A ++I MP+ P V +WGA+L+AC+ ++ +E
Sbjct: 451 -ADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVEL 509
Query: 437 GYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELN 496
G + + +DP++ G +V L N+Y+++ W+ +R + + K + GCS +E+
Sbjct: 510 GEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDV-GCSWVEVR 568
Query: 497 GTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVFGXXXXXXXXXXXXXTALSVHS 556
G F VGD+SHP+ E+ ++ + ++LK G+V T L HS
Sbjct: 569 GRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEET-LCSHS 627
Query: 557 EKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRVIIVRDRTRYHHFKDGI 616
E++AIA+GL++T GTP+RI KNLR C +CH TK ISK+ DR I+VRD R+HHFKDG+
Sbjct: 628 ERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGV 687
Query: 617 CSCKDYW 623
CSC DYW
Sbjct: 688 CSCGDYW 694
Score = 169 bits (428), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 220/434 (50%), Gaps = 57/434 (13%)
Query: 21 ASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVADAS----LSYAHKLFDQIPQ 76
ASL+D+ Q+KQ HA+L+ L S KL+ +S +++A ++FD +P+
Sbjct: 25 ASLIDSATHKAQLKQIHARLLVLGL---QFSGFLITKLIHASSSFGDITFARQVFDDLPR 81
Query: 77 PDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGE 136
P +F +N +I+ +S + + D+L+++ + + +SP+ ++F AC +Q G
Sbjct: 82 PQIFPWNAIIRGYSRN-NHFQDALLMYSNMQL-ARVSPDSFTFPHLLKACSGLSHLQMGR 139
Query: 137 QVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEW--AVDKDLYSWNTMIAAYVG 194
V + ++G D++VFV N LI +Y K + R VFE ++ + SW +++AY
Sbjct: 140 FVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQ 199
Query: 195 SGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSA 254
+G +A E+F +M++ DV KP+ VS
Sbjct: 200 NGEPMEALEIFSQMRKMDV-------------------------------KPDWVALVSV 228
Query: 255 LAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRK 314
L A + L L QG+ IH+ + + +++ LL S+ MYAKCG++ +A ++ ++
Sbjct: 229 LNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATA-KILFDKMKSPN 287
Query: 315 VWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGK-LYF 373
+ WNAMI G+A +G EAI +F +M ++V P+ ++ + ++AC+ +E+ + +Y
Sbjct: 288 LILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYE 347
Query: 374 RLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVL-------- 425
+ SDY ++ ++D+ ++ G ++ A ++ + DV +W A++
Sbjct: 348 YVGRSDYR--DDVFISSALIDMFAKCGSVEGAR-LVFDRTLDRDVVVWSAMIVGYGLHGR 404
Query: 426 --NACRIYKDMERG 437
A +Y+ MERG
Sbjct: 405 AREAISLYRAMERG 418
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 136/316 (43%), Gaps = 43/316 (13%)
Query: 20 LASLVDTCKSIQQIKQ---THAQLVTTALISHHVSANKFLKL----VADASLSYAHKLFD 72
L S+++ +Q +KQ HA +V L + + + L ++ A LFD
Sbjct: 225 LVSVLNAFTCLQDLKQGRSIHASVVKMGL---EIEPDLLISLNTMYAKCGQVATAKILFD 281
Query: 73 QIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSV 132
++ P+L ++N MI ++ + + M ++ +D + P+ S AC S+
Sbjct: 282 KMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKD--VRPDTISITSAISACAQVGSL 339
Query: 133 QEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAY 192
++ + + + +VF+ +ALI M+ K G VE R VF+ +D+D+ W+ MI
Sbjct: 340 EQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMI--- 396
Query: 193 VGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFV 252
VG G +A+ EA+ + M + G PN+ TF+
Sbjct: 397 VGYGLHGRAR----------------------------EAISLYRAMERGGVHPNDVTFL 428
Query: 253 SALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAK 312
L AC++ + +G W + + +I ++ A +ID+ + G ++ A V +
Sbjct: 429 GLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQ 488
Query: 313 RKVWPWNAMIGGFAMH 328
V W A++ H
Sbjct: 489 PGVTVWGALLSACKKH 504
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 360 bits (924), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 208/624 (33%), Positives = 320/624 (51%), Gaps = 73/624 (11%)
Query: 34 KQTHAQLVTTALISHHVSANKFLKLVADAS-LSYAHKLFDQIPQPDLFIYNTMIKAHSLS 92
KQ H Q++ S+ + + L + A+ +S A K+F + + +YN+++ L+
Sbjct: 159 KQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGG-LLA 217
Query: 93 PSSCNDSLMVFRLLTRDS-----------------------------GLSPNRYSFVFTF 123
D+L +FR + +DS GL ++Y F
Sbjct: 218 CGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVL 277
Query: 124 GACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLY 183
ACG ++ EG+Q+ + ++ +++V +ALI MY K + Y
Sbjct: 278 PACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHY-------------- 323
Query: 184 SWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVG 243
AK +FD M++++VVSW+ ++ GY Q G EA+ F M + G
Sbjct: 324 -----------------AKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSG 366
Query: 244 PKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESAS 303
P+ YT A++AC+N+ +L++G H + + S++ +Y KCG+I+ ++
Sbjct: 367 IDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDST 426
Query: 304 RVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHG 363
R+F E N + V W AM+ +A G+ E I++F KM + P+ VT +++ACS
Sbjct: 427 RLFNEMNVRDAV-SWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRA 485
Query: 364 YMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGA 423
+VE+G+ YF+LM S+YGI+P I HY CM+DL SR+G L+EA I+ MP PD W
Sbjct: 486 GLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTT 545
Query: 424 VLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDA----RMLREKSE 479
+L+ACR ++E G + E+DP+H + LL +IY+S G+W+ R +REK+
Sbjct: 546 LLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKN- 604
Query: 480 ISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVFGXXX 539
KK PG S I+ G + F D S P ++Y+ L+E+ K+ GY P
Sbjct: 605 ----VKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVH 660
Query: 540 XXXXXXXXXXTALSVHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDR 599
L+ HSE+LAIAFGL+ G PIR+ KNLRVC DCH TK IS V R
Sbjct: 661 HDVEEAVKVKM-LNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGR 719
Query: 600 VIIVRDRTRYHHFKDGICSCKDYW 623
I+VRD R+H FKDG CSC D+W
Sbjct: 720 EILVRDAVRFHRFKDGTCSCGDFW 743
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 192/396 (48%), Gaps = 36/396 (9%)
Query: 63 SLSYAHKLFDQIPQPDLF-------------------------------IYNTMIKAHSL 91
S +YA ++FD+IPQP+LF +N +I+ +SL
Sbjct: 56 SSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSL 115
Query: 92 SPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNV 151
S ++ + + RD + R + + + V G+Q+ +K+G +S +
Sbjct: 116 S-GLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYL 174
Query: 152 FVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQ 211
V + L+ MY G + +KVF D++ +N+++ + G + A +LF M E+
Sbjct: 175 LVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EK 233
Query: 212 DVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIH 271
D VSW+ +I G Q G EA++ F M G K ++Y F S L AC L A+++GK IH
Sbjct: 234 DSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIH 293
Query: 272 SFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKP 331
+ I R + + + +++IDMY KC + A VF + ++ V W AM+ G+ G+
Sbjct: 294 ACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVF-DRMKQKNVVSWTAMVVGYGQTGRA 352
Query: 332 SEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGC 391
EA+K+F M+ + P+ T ++AC++ +EEG + ++ G+I +
Sbjct: 353 EEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITS-GLIHYVTVSNS 411
Query: 392 MVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNA 427
+V L + G + ++ + + M + D W A+++A
Sbjct: 412 LVTLYGKCGDIDDSTRLFNEMNVR-DAVSWTAMVSA 446
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 146/341 (42%), Gaps = 50/341 (14%)
Query: 151 VFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQE 210
F+ N ++ Y Y R+VF+ +L+SWN ++ AY +G +S+ + F+++ +
Sbjct: 41 TFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPD 100
Query: 211 QDVVSWSTIIAGYVQVGCFMEALDFFHRMLQ-VGPKPNEYTFVSALAACSNLVALDQGKW 269
+D V+W+ +I GY G A+ ++ M++ T ++ L S+ + GK
Sbjct: 101 RDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQ 160
Query: 270 IHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVW------------- 316
IH + + + + + ++ MYA G I A +VF+ + + V
Sbjct: 161 IHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGM 220
Query: 317 ----------------PWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNAC 360
W AMI G A +G EAI+ F++MKV+ + ++ F ++L AC
Sbjct: 221 IEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPAC 280
Query: 361 SHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAI 420
+ EGK ++ I ++D+ + L A+ + M +V
Sbjct: 281 GGLGAINEGKQIHACIIRT-NFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQ-KNVVS 338
Query: 421 WGAVL----------NACRIYKDMERGYRIGRIIKEMDPNH 451
W A++ A +I+ DM+R +DP+H
Sbjct: 339 WTAMVVGYGQTGRAEEAVKIFLDMQR--------SGIDPDH 371
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 360 bits (923), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 211/600 (35%), Positives = 321/600 (53%), Gaps = 8/600 (1%)
Query: 28 KSIQQIKQTHAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIPQPDLFIYNTMI 86
+++ K HA +V ++ AN + + + S+A ++FD++P D + +++
Sbjct: 17 RTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVL 76
Query: 87 KAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVG 146
A + + S +L VF + SGL P+ + F AC N S+ G QV H +
Sbjct: 77 TALNQANLS-GKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSE 135
Query: 147 LDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFD 206
++ V ++L+ MY K GL+ + VF+ K+ SW M++ Y SG +A ELF
Sbjct: 136 YANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFR 195
Query: 207 EMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKP-NEYTFVSALAACSNLVALD 265
+ +++ SW+ +I+G+VQ G +EA F M + + S + AC+NL A
Sbjct: 196 ILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASI 255
Query: 266 QGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGF 325
G+ +H + + ++IDMYAKC ++ +A +F R V W ++I G
Sbjct: 256 AGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIF-SRMRHRDVVSWTSLIVGM 314
Query: 326 AMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPE 385
A HG+ +A+ ++ M V PN+VTFV L+ ACSH VE+G+ F+ M DYGI P
Sbjct: 315 AQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPS 374
Query: 386 IEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIG-RII 444
++HY C++DLL R+GLL EAE++I +MP PD W A+L+AC+ + G RI ++
Sbjct: 375 LQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLV 434
Query: 445 KEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNGTFYQFLV 504
++LL NIY+S+ W R K +K PG SS+E+ F
Sbjct: 435 SSFKLKDPSTYILLSNIYASASLWGKVSEARRKLG-EMEVRKDPGHSSVEVRKETEVFYA 493
Query: 505 GDRSHPQSRELYSFLDEMTTKLKIA-GYVPVFGXXXXXXXXXXXXXTALSVHSEKLAIAF 563
G+ SHP +++ L ++ +++I GYVP L HSE+ A+A+
Sbjct: 494 GETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKL-LFWHSERSAVAY 552
Query: 564 GLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRVIIVRDRTRYHHFKDGICSCKDYW 623
GLL PGTPIRIVKNLRVC DCH V K IS++ +R IIVRD TRYHHFK G CSC D+W
Sbjct: 553 GLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCNDFW 612
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 360 bits (923), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 193/547 (35%), Positives = 309/547 (56%), Gaps = 9/547 (1%)
Query: 79 LFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQV 138
L YN MI + MV R+++ SG+ + +++ AC +Q G+QV
Sbjct: 251 LVAYNAMISGYVNRGFYQEALEMVRRMVS--SGIELDEFTYPSVIRACATAGLLQLGKQV 308
Query: 139 RSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNM 198
++ ++ D + N+L+ +Y K G + R +FE KDL SWN +++ YV SG++
Sbjct: 309 HAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHI 367
Query: 199 SQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAAC 258
+AK +F EM+E++++SW +I+G + G E L F M + G +P +Y F A+ +C
Sbjct: 368 GEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSC 427
Query: 259 SNLVALDQGKWIHSFIGRGEIKMNERLLA--SIIDMYAKCGEIESASRVFWEHNAKRKVW 316
+ L A G+ H+ + + I + L A ++I MYAKCG +E A +VF V
Sbjct: 428 AVLGAYCNGQQYHAQLLK--IGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSV- 484
Query: 317 PWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLM 376
WNA+I HG +EA+ V+++M + + P+++T + +L ACSH +V++G+ YF M
Sbjct: 485 SWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSM 544
Query: 377 VSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMER 436
+ Y I P +HY ++DLL R+G +AE +I S+P P IW A+L+ CR++ +ME
Sbjct: 545 ETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMEL 604
Query: 437 GYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELN 496
G + + P H G ++LL N+++++G+W + +R K KK CS IE+
Sbjct: 605 GIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVR-KLMRDRGVKKEVACSWIEME 663
Query: 497 GTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVFGXXXXXXXXXXXXXTALSVHS 556
+ FLV D SHP++ +Y +L ++ +++ GYVP L+ HS
Sbjct: 664 TQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHS 723
Query: 557 EKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRVIIVRDRTRYHHFKDGI 616
EK+A+AFGL+ PGT IRI KNLR C DCH +F+S V R II+RDR R+HHF++G
Sbjct: 724 EKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGE 783
Query: 617 CSCKDYW 623
CSC ++W
Sbjct: 784 CSCGNFW 790
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 121/498 (24%), Positives = 216/498 (43%), Gaps = 90/498 (18%)
Query: 29 SIQQIKQTHAQLVTTALISHHVSANKFLKLVADAS-LSYAHKLFDQIPQPDLFIYNTMIK 87
S+Q + H ++T N+ + + +S L+YA +LFD+I +PD TM+
Sbjct: 29 SLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVS 88
Query: 88 AHSLS-------------PSSCNDSLMVFRLLT------------------RDSGLSPNR 116
+ S P D++M ++T + G P+
Sbjct: 89 GYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDN 148
Query: 117 YSFVFTFGACGNGLSV-----QEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWG----LV 167
FTF + GL++ ++ Q + A+K G V NAL+ +Y K L+
Sbjct: 149 ----FTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLL 204
Query: 168 EYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQ-DVVSWSTIIAGYVQV 226
RKVF+ ++KD SW TM+ YV +G +EL + M + +V+++ +I+GYV
Sbjct: 205 HSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNR 264
Query: 227 GCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLL 286
G + EAL+ RM+ G + +E+T+ S + AC+ L GK +H+++ R E +
Sbjct: 265 GFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFD 323
Query: 287 ASIIDMYAKCGEIESASRVFWEHNAK------------------------------RKVW 316
S++ +Y KCG+ + A +F + AK + +
Sbjct: 324 NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNIL 383
Query: 317 PWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLM 376
W MI G A +G E +K+F MK E P F + +C+ G+ Y +
Sbjct: 384 SWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQL 443
Query: 377 VSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVL----------N 426
+ G + ++ + ++ G+++EA + +MP V+ W A++
Sbjct: 444 LK-IGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVS-WNALIAALGQHGHGAE 501
Query: 427 ACRIYKDM-ERGYRIGRI 443
A +Y++M ++G R RI
Sbjct: 502 AVDVYEEMLKKGIRPDRI 519
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 359 bits (921), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 206/606 (33%), Positives = 322/606 (53%), Gaps = 40/606 (6%)
Query: 22 SLVDTCKSIQQIK---QTHAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIPQP 77
S++ TC + ++ Q H+Q++ T + + + + A L A + +
Sbjct: 495 SILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK 554
Query: 78 DLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQ 137
D+ + TMI ++ + + +L FR + D G+ + AC +++EG+Q
Sbjct: 555 DVVSWTTMIAGYT-QYNFDDKALTTFRQML-DRGIRSDEVGLTNAVSACAGLQALKEGQQ 612
Query: 138 VRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGN 197
+ + A G S++ NAL+ +Y + G +E +Y+
Sbjct: 613 IHAQACVSGFSSDLPFQNALVTLYSRCGKIE---------------------ESYLA--- 648
Query: 198 MSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAA 257
F++ + D ++W+ +++G+ Q G EAL F RM + G N +TF SA+ A
Sbjct: 649 -------FEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKA 701
Query: 258 CSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWP 317
S + QGK +H+ I + + ++I MYAKCG I A + F E + K +V
Sbjct: 702 ASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEV-S 760
Query: 318 WNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMV 377
WNA+I ++ HG SEA+ F +M NV PN VT V +L+ACSH +V++G YF M
Sbjct: 761 WNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMN 820
Query: 378 SDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERG 437
S+YG+ P+ EHY C+VD+L+RAGLL A++ I MP+ PD +W +L+AC ++K+ME G
Sbjct: 821 SEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIG 880
Query: 438 YRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNG 497
+ E++P +VLL N+Y+ S +W DAR L + KK PG S IE+
Sbjct: 881 EFAAHHLLELEPEDSATYVLLSNLYAVSKKW-DARDLTRQKMKEKGVKKEPGQSWIEVKN 939
Query: 498 TFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVFGXXXXXXXXXXXXXTALSVHSE 557
+ + F VGD++HP + E++ + ++T + GYV + +HSE
Sbjct: 940 SIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQD-CFSLLNELQHEQKDPIIFIHSE 998
Query: 558 KLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRVIIVRDRTRYHHFKDGIC 617
KLAI+FGLL+ PI ++KNLRVC DCH KF+SKV +R IIVRD R+HHF+ G C
Sbjct: 999 KLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGAC 1058
Query: 618 SCKDYW 623
SCKDYW
Sbjct: 1059 SCKDYW 1064
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 191/412 (46%), Gaps = 40/412 (9%)
Query: 20 LASLVDTCKSIQQI---KQTHAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIP 75
LASLV C + + +Q HA S++ L L A A + A F +
Sbjct: 392 LASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETE 451
Query: 76 QPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEG 135
++ ++N M+ A+ L +S +FR + + + PN+Y++ C ++ G
Sbjct: 452 VENVVLWNVMLVAYGL-LDDLRNSFRIFRQMQIEE-IVPNQYTYPSILKTCIRLGDLELG 509
Query: 136 EQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGS 195
EQ+ S +K N +V + LI MY K G ++ +W+ +I + G
Sbjct: 510 EQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDT--------------AWDILIR-FAG- 553
Query: 196 GNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSAL 255
+DVVSW+T+IAGY Q +AL F +ML G + +E +A+
Sbjct: 554 ---------------KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAV 598
Query: 256 AACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKV 315
+AC+ L AL +G+ IH+ + +++ +Y++CG+IE + F + A +
Sbjct: 599 SACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNI 658
Query: 316 WPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRL 375
WNA++ GF G EA++VF +M E + N TF + + A S +++GK
Sbjct: 659 -AWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGK-QVHA 716
Query: 376 MVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNA 427
+++ G E E ++ + ++ G + +AE + +V+ W A++NA
Sbjct: 717 VITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVS-WNAIINA 767
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 187/397 (47%), Gaps = 43/397 (10%)
Query: 33 IKQTHAQLVTTALISHHVSANKFLKLVA-DASLSYAHKLFDQIPQPDLFIYNTMIKAHSL 91
++Q HA+++ L V N + L + + + A ++FD + D + MI L
Sbjct: 206 VEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISG--L 263
Query: 92 SPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNV 151
S + C + G+ P Y+F AC S++ GEQ+ +K+G S+
Sbjct: 264 SKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDT 323
Query: 152 FVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQ 211
+V NAL+ + Y GN+ A+ +F M ++
Sbjct: 324 YVCNALVSL-------------------------------YFHLGNLISAEHIFSNMSQR 352
Query: 212 DVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIH 271
D V+++T+I G Q G +A++ F RM G +P+ T S + ACS L +G+ +H
Sbjct: 353 DAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLH 412
Query: 272 SFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKP 331
++ + N ++ +++++YAKC +IE+A F E + V WN M+ + +
Sbjct: 413 AYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVL-WNVMLVAYGLLDDL 471
Query: 332 SEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEG-KLYFRLMVSDYGIIPEIEHYG 390
+ ++F++M++E + PN+ T+ ++L C +E G +++ +++ +++ ++ Y
Sbjct: 472 RNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNF----QLNAYV 527
Query: 391 C--MVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVL 425
C ++D+ ++ G L A D++ DV W ++
Sbjct: 528 CSVLIDMYAKLGKLDTAWDILIRFA-GKDVVSWTTMI 563
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/448 (23%), Positives = 200/448 (44%), Gaps = 44/448 (9%)
Query: 10 KPFHSDHCCRLASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKL-VADASLSYAH 68
+P H L + T S+ + ++ H+Q++ L S+ + K + L A
Sbjct: 81 RPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAF 140
Query: 69 KLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTR--DSGLSPNRYSFVFTFGAC 126
K+FD++P+ +F +N MIK +S N VF L R ++PN +F AC
Sbjct: 141 KVFDEMPERTIFTWNKMIK----ELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC 196
Query: 127 -GNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSW 185
G ++ EQ+ + + GL + V N LI +Y + G V+ R+V
Sbjct: 197 RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRV------------ 244
Query: 186 NTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPK 245
FD ++ +D SW +I+G + C EA+ F M +G
Sbjct: 245 -------------------FDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIM 285
Query: 246 PNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRV 305
P Y F S L+AC + +L+ G+ +H + + + + +++ +Y G + SA +
Sbjct: 286 PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHI 345
Query: 306 FWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYM 365
F + ++R +N +I G + G +A+++F++M ++ + P+ T +L+ ACS
Sbjct: 346 F-SNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGT 404
Query: 366 VEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVL 425
+ G+ + G + G +++L ++ ++ A D + +V +W +L
Sbjct: 405 LFRGQ-QLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEV-ENVVLWNVML 462
Query: 426 NACRIYKDMERGYRIGR--IIKEMDPNH 451
A + D+ +RI R I+E+ PN
Sbjct: 463 VAYGLLDDLRNSFRIFRQMQIEEIVPNQ 490
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 358 bits (920), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 206/558 (36%), Positives = 311/558 (55%), Gaps = 14/558 (2%)
Query: 67 AHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGAC 126
AH+LFD+IP+PD F YN M+ + + + R+ +D+ ++ + T G
Sbjct: 112 AHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAA----SWNTMIT-GYA 166
Query: 127 GNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWN 186
G E E+ R + ++ N NA+I Y + G +E F+ A + + +W
Sbjct: 167 RRG----EMEKARELFYSM-MEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWT 221
Query: 187 TMIAAYVGSGNMSQAKELFDEMQ-EQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPK 245
MI Y+ + + A+ +F +M +++V+W+ +I+GYV+ + L F ML+ G +
Sbjct: 222 AMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIR 281
Query: 246 PNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRV 305
PN SAL CS L AL G+ IH + + + + L S+I MY KCGE+ A ++
Sbjct: 282 PNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKL 341
Query: 306 FWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYM 365
F E K+ V WNAMI G+A HG +A+ +F++M + P+ +TFVA+L AC+H +
Sbjct: 342 F-EVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGL 400
Query: 366 VEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVL 425
V G YF MV DY + P+ +HY CMVDLL RAG L+EA +I SMP P A++G +L
Sbjct: 401 VNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLL 460
Query: 426 NACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATK 485
ACR++K++E + +++ + +V L NIY+S RW D +R++ + S
Sbjct: 461 GACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVV- 519
Query: 486 KIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVFGXXXXXXXXX 545
K+PG S IE+ + F DR HP+ ++ L E+ K+K+AGY P
Sbjct: 520 KVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEE 579
Query: 546 XXXXTALSVHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRVIIVRD 605
L HSEKLA+AFG + G+ I++ KNLR+C DCH+ KFIS++ R IIVRD
Sbjct: 580 QKEKLLL-WHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRD 638
Query: 606 RTRYHHFKDGICSCKDYW 623
TR+HHFKDG CSC DYW
Sbjct: 639 TTRFHHFKDGSCSCGDYW 656
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 98/218 (44%), Gaps = 23/218 (10%)
Query: 43 TALISHHVSANKFLKLVADASLSYAHKLF-DQIPQPDLFIYNTMIKAHSLSPSSCNDSLM 101
TA+I+ ++ A K + A +F D +L +N MI + + S D L
Sbjct: 221 TAMITGYMKAKK---------VELAEAMFKDMTVNKNLVTWNAMISGY-VENSRPEDGLK 270
Query: 102 VFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMY 161
+FR + + G+ PN C ++Q G Q+ K L ++V + +LI MY
Sbjct: 271 LFRAML-EEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMY 329
Query: 162 GKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDV-VSWSTII 220
K G + K+FE KD+ +WN MI+ Y GN +A LF EM + + W T +
Sbjct: 330 CKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFV 389
Query: 221 --------AGYVQVGCFMEALDFFHRMLQVGPKPNEYT 250
AG V +G M + R +V P+P+ YT
Sbjct: 390 AVLLACNHAGLVNIG--MAYFESMVRDYKVEPQPDHYT 425
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 358 bits (919), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 178/483 (36%), Positives = 289/483 (59%), Gaps = 8/483 (1%)
Query: 146 GLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDL----YSWNTMIAAYVGSGNMSQA 201
G+ +V+ V A++ ++ L++ G++V EW + DL + N ++ Y G+M +A
Sbjct: 392 GISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEA 451
Query: 202 KELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGP-KPNEYTFVSALAACSN 260
+ +F EM+ +D++SW+TII GY + EAL F+ +L+ P+E T L AC++
Sbjct: 452 ELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACAS 511
Query: 261 LVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNA 320
L A D+G+ IH +I R + + S++DMYAKCG + A +F + A + + W
Sbjct: 512 LSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLF-DDIASKDLVSWTV 570
Query: 321 MIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDY 380
MI G+ MHG EAI +F +M+ + ++++FV+LL ACSH +V+EG +F +M +
Sbjct: 571 MIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHEC 630
Query: 381 GIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRI 440
I P +EHY C+VD+L+R G L +A I +MP+ PD IWGA+L CRI+ D++ ++
Sbjct: 631 KIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKV 690
Query: 441 GRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNGTFY 500
+ E++P + G +VL+ NIY+ + +W + LR++ +K PGCS IE+ G
Sbjct: 691 AEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIG-QRGLRKNPGCSWIEIKGRVN 749
Query: 501 QFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVFGXXXXXXXXXXXXXTALSVHSEKLA 560
F+ GD S+P++ + +FL ++ ++ GY P+ AL HSEKLA
Sbjct: 750 IFVAGDSSNPETENIEAFLRKVRARMIEEGYSPL-TKYALIDAEEMEKEEALCGHSEKLA 808
Query: 561 IAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRVIIVRDRTRYHHFKDGICSCK 620
+A G++++ G IR+ KNLRVC DCH++ KF+SK+ R I++RD R+H FKDG CSC+
Sbjct: 809 MALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCR 868
Query: 621 DYW 623
+W
Sbjct: 869 GFW 871
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 202/410 (49%), Gaps = 39/410 (9%)
Query: 18 CRLASLVDTCKSIQQIKQTHAQLVTTA-LISHHVSANKFLKLVADASLSYAHKLFDQIPQ 76
C + L KS++ K+ + +I ++ + L L A ++FD++
Sbjct: 98 CSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKI 157
Query: 77 PDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGE 136
+N ++ + S + S+ +F+ + SG+ + Y+F + + SV GE
Sbjct: 158 EKALFWNILMNELAKS-GDFSGSIGLFKKMM-SSGVEMDSYTFSCVSKSFSSLRSVHGGE 215
Query: 137 QVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSG 196
Q+ +K G +G+ V N+++A Y+ +
Sbjct: 216 QLHGFILKSG--------------FGERNSV-----------------GNSLVAFYLKNQ 244
Query: 197 NMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALA 256
+ A+++FDEM E+DV+SW++II GYV G + L F +ML G + + T VS A
Sbjct: 245 RVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFA 304
Query: 257 ACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVW 316
C++ + G+ +HS + +R +++DMY+KCG+++SA VF E + R V
Sbjct: 305 GCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREM-SDRSVV 363
Query: 317 PWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGK-LYFRL 375
+ +MI G+A G EA+K+F++M+ E +SP+ T A+LN C+ +++EGK ++ +
Sbjct: 364 SYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWI 423
Query: 376 MVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVL 425
+D G +I ++D+ ++ G ++EAE + S M + D+ W ++
Sbjct: 424 KENDLGF--DIFVSNALMDMYAKCGSMQEAELVFSEMRV-KDIISWNTII 470
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 165/360 (45%), Gaps = 51/360 (14%)
Query: 28 KSIQQIKQTHAQLVTTALISHHVSANKFLKL-VADASLSYAHKLFDQIPQPDLFIYNTMI 86
+S+ +Q H ++ + + N + + + + A K+FD++ + D+ +N++I
Sbjct: 209 RSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSII 268
Query: 87 KAHSLSPSSCNDSLMVF-RLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKV 145
+ +S L VF ++L SG+ + + V F C + + G V S VK
Sbjct: 269 NGY-VSNGLAEKGLSVFVQMLV--SGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKA 325
Query: 146 GLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELF 205
N L+ MY K G++ AK +F
Sbjct: 326 CFSREDRFCNTLLDMYSK-------------------------------CGDLDSAKAVF 354
Query: 206 DEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALD 265
EM ++ VVS++++IAGY + G EA+ F M + G P+ YT + L C+ LD
Sbjct: 355 REMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLD 414
Query: 266 QGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGF 325
+GK +H +I ++ + + +++DMYAKCG ++ A VF E K + WN +IGG+
Sbjct: 415 EGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK-DIISWNTIIGGY 473
Query: 326 AMHGKPSEAIKVFQKMKVEN-VSPNKVTFVALLNACS-----------HGYMVEEGKLYF 373
+ + +EA+ +F + E SP++ T +L AC+ HGY++ G YF
Sbjct: 474 SKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNG--YF 531
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 152/341 (44%), Gaps = 53/341 (15%)
Query: 176 WAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDF 235
+ +D +L S +++ Y G++ +A +FDE++ + + W+ ++ + G F ++
Sbjct: 125 FVIDSNLGSKLSLM--YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGL 182
Query: 236 FHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAK 295
F +M+ G + + YTF + S+L ++ G+ +H FI + + S++ Y K
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLK 242
Query: 296 CGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVA 355
++SA +VF E +R V WN++I G+ +G + + VF +M V + + T V+
Sbjct: 243 NQRVDSARKVFDEM-TERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVS 301
Query: 356 LLNACSHGYMVEEG-----------------------------------KLYFRLMVSDY 380
+ C+ ++ G K FR M SD
Sbjct: 302 VFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREM-SDR 360
Query: 381 GIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMP---MAPDVAIWGAVLNACRIYKDMERG 437
++ Y M+ +R GL EA + M ++PDV AVLN C Y+ ++ G
Sbjct: 361 SVVS----YTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEG 416
Query: 438 YRIGRIIKEMDPNHVGCHVLLGN----IYSSSGRWNDARML 474
R+ IKE N +G + + N +Y+ G +A ++
Sbjct: 417 KRVHEWIKE---NDLGFDIFVSNALMDMYAKCGSMQEAELV 454
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 149/348 (42%), Gaps = 50/348 (14%)
Query: 16 HCCRLASLVDTCKSIQQ-IKQTHAQL---VTTALISHHVSANKFLKLVADASLSYAHKLF 71
+CC L+D K + + IK+ V+ AL+ + S+ A +F
Sbjct: 405 NCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKC---------GSMQEAELVF 455
Query: 72 DQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLS 131
++ D+ +NT+I +S + + N++L +F LL + SP+ + AC + +
Sbjct: 456 SEMRVKDIISWNTIIGGYSKNCYA-NEALSLFNLLLEEKRFSPDERTVACVLPACASLSA 514
Query: 132 VQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAA 191
+G ++ + ++ G S+ V N+L+ MY K G + +F+ KDL SW MIA
Sbjct: 515 FDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAG 574
Query: 192 YVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTF 251
Y G +A LF++M+ Q G + +E +F
Sbjct: 575 YGMHGFGKEAIALFNQMR-------------------------------QAGIEADEISF 603
Query: 252 VSALAACSNLVALDQGKWIHSFIGRGEIKMNERL--LASIIDMYAKCGEIESASRVFWEH 309
VS L ACS+ +D+G W I R E K+ + A I+DM A+ G++ A R
Sbjct: 604 VSLLYACSHSGLVDEG-WRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENM 662
Query: 310 NAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALL 357
W A++ G +H A KV + KV + P + L+
Sbjct: 663 PIPPDATIWGALLCGCRIHHDVKLAEKVAE--KVFELEPENTGYYVLM 708
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 12/131 (9%)
Query: 250 TFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEH 309
T S L C++ +L GK + +FI ++ L + + MY CG+++ ASRVF E
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEV 155
Query: 310 NAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACS-------- 361
++ ++ WN ++ A G S +I +F+KM V + TF + + S
Sbjct: 156 KIEKALF-WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGG 214
Query: 362 ---HGYMVEEG 369
HG++++ G
Sbjct: 215 EQLHGFILKSG 225
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 357 bits (915), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 205/567 (36%), Positives = 315/567 (55%), Gaps = 39/567 (6%)
Query: 59 VADASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYS 118
V L A K+FD++P L +N MI A + + L +FR + G SP+ Y+
Sbjct: 36 VRAGDLVNARKVFDEMPDRKLTTWNAMI-AGLIQFEFNEEGLSLFREM-HGLGFSPDEYT 93
Query: 119 FVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAV 178
F SV G+Q+ + +K GL+ ++ V ++L MY + G ++ G V
Sbjct: 94 LGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIR--- 150
Query: 179 DKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHR 238
M +++V+W+T+I G Q GC E + + ++
Sbjct: 151 ----------------------------SMPVRNLVAWNTLIMGNAQNGC-PETVLYLYK 181
Query: 239 MLQV-GPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCG 297
M+++ G +PN+ TFV+ L++CS+L QG+ IH+ + +++S+I MY+KCG
Sbjct: 182 MMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCG 241
Query: 298 EIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVE-NVSPNKVTFVAL 356
+ A++ F E + +V W++MI + HG+ EAI++F M + N+ N+V F+ L
Sbjct: 242 CLGDAAKAFSEREDEDEVM-WSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNL 300
Query: 357 LNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAP 416
L ACSH + ++G F +MV YG P ++HY C+VDLL RAG L +AE +I SMP+
Sbjct: 301 LYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKT 360
Query: 417 DVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLRE 476
D+ IW +L+AC I+K+ E R+ + I ++DPN C+VLL N+++S+ RW D +R
Sbjct: 361 DIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVR- 419
Query: 477 KSEISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVFG 536
KS KK G S E G +QF +GDRS +S+E+YS+L E+T ++K+ GY P
Sbjct: 420 KSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTA 479
Query: 537 XXXXXXXXXXXXXTALSVHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKV 596
+ L HSEKLA+AF L+ G PIRI+KNLRVC DCH K+IS +
Sbjct: 480 -SVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVI 538
Query: 597 YDRVIIVRDRTRYHHFKDGICSCKDYW 623
+R I +RD +R+HHF +G CSC DYW
Sbjct: 539 KNREITLRDGSRFHHFINGKCSCGDYW 565
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 134/270 (49%), Gaps = 3/270 (1%)
Query: 158 IGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWS 217
+ MY K G V+ K+ S N +I YV +G++ A+++FDEM ++ + +W+
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 218 TIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRG 277
+IAG +Q E L F M +G P+EYT S + + L ++ G+ IH + +
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120
Query: 278 EIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKV 337
++++ + +S+ MY + G+++ V R + WN +I G A +G P + +
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPV-RNLVAWNTLIMGNAQNGCPETVLYL 179
Query: 338 FQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLS 397
++ MK+ PNK+TFV +L++CS + +G+ + G + ++ + S
Sbjct: 180 YKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIK-IGASSVVAVVSSLISMYS 238
Query: 398 RAGLLKEAEDMISSMPMAPDVAIWGAVLNA 427
+ G L +A S D +W ++++A
Sbjct: 239 KCGCLGDAAKAFSERE-DEDEVMWSSMISA 267
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 354 bits (908), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 208/562 (37%), Positives = 298/562 (53%), Gaps = 45/562 (8%)
Query: 64 LSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTF 123
L+ AH+LFDQ+PQ ++ + TMI A+S +L + L+ RD+ + PN Y++
Sbjct: 112 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIH-QKALELLVLMLRDN-VRPNVYTYSSVL 169
Query: 124 GACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLY 183
+C NG+S + + +K GL+S+VFV +ALI ++ K G E VF+ V D
Sbjct: 170 RSC-NGMS--DVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAI 226
Query: 184 SWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVG 243
WN++I F + DV AL+ F RM + G
Sbjct: 227 VWNSIIGG-------------FAQNSRSDV------------------ALELFKRMKRAG 255
Query: 244 PKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLA--SIIDMYAKCGEIES 301
+ T S L AC+ L L+ G H I +K ++ L+ +++DMY KCG +E
Sbjct: 256 FIAEQATLTSVLRACTGLALLELGMQAHVHI----VKYDQDLILNNALVDMYCKCGSLED 311
Query: 302 ASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACS 361
A RVF +R V W+ MI G A +G EA+K+F++MK PN +T V +L ACS
Sbjct: 312 ALRVF-NQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACS 370
Query: 362 HGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIW 421
H ++E+G YFR M YGI P EHYGCM+DLL +AG L +A +++ M PD W
Sbjct: 371 HAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTW 430
Query: 422 GAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEIS 481
+L ACR+ ++M + + +DP G + LL NIY++S +W+ +R +
Sbjct: 431 RTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMR-D 489
Query: 482 TATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVFGXXXXX 541
KK PGCS IE+N + F++GD SHPQ E+ L+++ +L GYVP
Sbjct: 490 RGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETN-FVLQ 548
Query: 542 XXXXXXXXTALSVHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRVI 601
+L HSEKLA+AFGL+ IRI KNLR+C DCH K SK+ R I
Sbjct: 549 DLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSI 608
Query: 602 IVRDRTRYHHFKDGICSCKDYW 623
++RD RYHHF+DG CSC DYW
Sbjct: 609 VIRDPIRYHHFQDGKCSCGDYW 630
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 153/318 (48%), Gaps = 41/318 (12%)
Query: 111 GLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYG 170
GL + ++ C + +V EG + H G +F+VN LI MY K+ L
Sbjct: 56 GLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNL---- 111
Query: 171 RKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFM 230
++ A +LFD+M +++V+SW+T+I+ Y +
Sbjct: 112 ---------------------------LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQ 144
Query: 231 EALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASII 290
+AL+ ML+ +PN YT+ S L +C+ + + + +H I + ++ + + +++I
Sbjct: 145 KALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALI 201
Query: 291 DMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNK 350
D++AK GE E A VF E + WN++IGGFA + + A+++F++MK +
Sbjct: 202 DVFAKLGEPEDALSVFDEMVTGDAI-VWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQ 260
Query: 351 VTFVALLNACSHGYMVEEG-KLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMI 409
T ++L AC+ ++E G + + ++ D +I +VD+ + G L++A +
Sbjct: 261 ATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILN----NALVDMYCKCGSLEDALRVF 316
Query: 410 SSMPMAPDVAIWGAVLNA 427
+ M DV W +++
Sbjct: 317 NQMK-ERDVITWSTMISG 333
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 131/307 (42%), Gaps = 39/307 (12%)
Query: 21 ASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIPQPDL 79
+S++ +C + ++ H ++ L S + + + A A +FD++ D
Sbjct: 166 SSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDA 225
Query: 80 FIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQE-GEQV 138
++N++I + + S + +L +F+ + R +G + + AC GL++ E G Q
Sbjct: 226 IVWNSIIGGFAQNSRS-DVALELFKRMKR-AGFIAEQATLTSVLRAC-TGLALLELGMQA 282
Query: 139 RSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNM 198
H VK D ++ + NAL+ MY K G +E +VF ++D+ +W+TMI+ +
Sbjct: 283 HVHIVKY--DQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQN--- 337
Query: 199 SQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAAC 258
GY Q EAL F RM G KPN T V L AC
Sbjct: 338 -----------------------GYSQ-----EALKLFERMKSSGTKPNYITIVGVLFAC 369
Query: 259 SNLVALDQG-KWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWP 317
S+ L+ G + S I +ID+ K G+++ A ++ E +
Sbjct: 370 SHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVT 429
Query: 318 WNAMIGG 324
W ++G
Sbjct: 430 WRTLLGA 436
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 353 bits (907), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 209/613 (34%), Positives = 329/613 (53%), Gaps = 44/613 (7%)
Query: 20 LASLVDTCKSIQQIK---QTHAQLVTTALISHHVSANKFLKLVADAS-LSYAHKLFDQIP 75
L S + +C S++ K Q H + + + + +N + L A+ L+ K+F +P
Sbjct: 418 LISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP 477
Query: 76 QPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEG 135
+ D +N++I A + S S ++++ F L + +G NR +F A + + G
Sbjct: 478 EHDQVSWNSIIGALARSERSLPEAVVCF-LNAQRAGQKLNRITFSSVLSAVSSLSFGELG 536
Query: 136 EQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGS 195
+Q+ A+K + NALI YGK
Sbjct: 537 KQIHGLALKNNIADEATTENALIACYGK-------------------------------C 565
Query: 196 GNMSQAKELFDEMQEQ-DVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSA 254
G M +++F M E+ D V+W+++I+GY+ +ALD MLQ G + + + + +
Sbjct: 566 GEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATV 625
Query: 255 LAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRK 314
L+A +++ L++G +H+ R ++ + + ++++DMY+KCG ++ A R F+ R
Sbjct: 626 LSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALR-FFNTMPVRN 684
Query: 315 VWPWNAMIGGFAMHGKPSEAIKVFQKMKVE-NVSPNKVTFVALLNACSHGYMVEEGKLYF 373
+ WN+MI G+A HG+ EA+K+F+ MK++ P+ VTFV +L+ACSH ++EEG +F
Sbjct: 685 SYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHF 744
Query: 374 RLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNAC--RIY 431
M YG+ P IEH+ CM D+L RAG L + ED I MPM P+V IW VL AC
Sbjct: 745 ESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANG 804
Query: 432 KDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCS 491
+ E G + ++ +++P + +VLLGN+Y++ GRW D R+K + KK G S
Sbjct: 805 RKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMK-DADVKKEAGYS 863
Query: 492 SIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVFGXXXXXXXXXXXXXTA 551
+ + + F+ GD+SHP + +Y L E+ K++ AGYVP G
Sbjct: 864 WVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEI- 922
Query: 552 LSVHSEKLAIAFGLLNTAPGT-PIRIVKNLRVCRDCHQVTKFISKVYDRVIIVRDRTRYH 610
LS HSEKLA+AF L T PIRI+KNLRVC DCH K+ISK+ R II+RD R+H
Sbjct: 923 LSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFH 982
Query: 611 HFKDGICSCKDYW 623
HF+DG CSC D+W
Sbjct: 983 HFQDGACSCSDFW 995
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 136/264 (51%), Gaps = 9/264 (3%)
Query: 172 KVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFME 231
++++ +DKD+Y N +I AY+ +G+ A+++FDEM ++ VSW+ I++GY + G E
Sbjct: 26 RLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKE 85
Query: 232 ALDFFHRMLQVGPKPNEYTFVSALAACSNL--VALDQGKWIHSFIGRGEIKMNERLLASI 289
AL F M++ G N+Y FVS L AC + V + G+ IH + + ++ + +
Sbjct: 86 ALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVL 145
Query: 290 IDMYAKC-GEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSP 348
I MY KC G + A F + K V WN++I ++ G A ++F M+ + P
Sbjct: 146 ISMYWKCIGSVGYALCAFGDIEVKNSV-SWNSIISVYSQAGDQRSAFRIFSSMQYDGSRP 204
Query: 349 NKVTFVALL-NACSHGYMVEEGKLYFRLM--VSDYGIIPEIEHYGCMVDLLSRAGLLKEA 405
+ TF +L+ ACS + +L ++M + G++ ++ +V +++G L A
Sbjct: 205 TEYTFGSLVTTACS--LTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYA 262
Query: 406 EDMISSMPMAPDVAIWGAVLNACR 429
+ + M V + G ++ R
Sbjct: 263 RKVFNQMETRNAVTLNGLMVGLVR 286
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/419 (22%), Positives = 182/419 (43%), Gaps = 45/419 (10%)
Query: 20 LASLVDTCKSIQQ-----IKQTHAQLVTTALISHHVSANKFLKLVADA-SLSYAHKLFDQ 73
SLV T S+ + ++Q + + L++ + + A + SLSYA K+F+Q
Sbjct: 209 FGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQ 268
Query: 74 IPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFV---FTFGACGNGL 130
+ + N ++ + ++ +F + +SP Y + F + +
Sbjct: 269 METRNAVTLNGLMVGL-VRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEV 327
Query: 131 SVQEGEQVRSHAVKVGL-DSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMI 189
+++G +V H + GL D V + N L+ MY K
Sbjct: 328 GLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAK-------------------------- 361
Query: 190 AAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEY 249
G+++ A+ +F M ++D VSW+++I G Q GCF+EA++ + M + P +
Sbjct: 362 -----CGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSF 416
Query: 250 TFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEH 309
T +S+L++C++L G+ IH + I +N + +++ +YA+ G + ++F
Sbjct: 417 TLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSM 476
Query: 310 NAKRKVWPWNAMIGGFAMHGKP-SEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEE 368
+V WN++IG A + EA+ F + N++TF ++L+A S E
Sbjct: 477 PEHDQV-SWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGEL 535
Query: 369 GKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNA 427
GK L + + I E ++ + G + E + S M D W ++++
Sbjct: 536 GKQIHGLALKN-NIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/429 (21%), Positives = 185/429 (43%), Gaps = 41/429 (9%)
Query: 30 IQQIKQTHAQLVTTALISHHVS-ANKFLKLVAD-ASLSYAHKLFDQIPQPDLFIYNTMIK 87
+++ ++ H ++TT L+ V N + + A S++ A ++F + D +N+MI
Sbjct: 329 LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMIT 388
Query: 88 AHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGL 147
L + C + R + P ++ + + +C + + G+Q+ ++K+G+
Sbjct: 389 G--LDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGI 446
Query: 148 DSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDE 207
D NV V NAL+ +Y + +G +++ +++F
Sbjct: 447 DLNVSVSNALMTLYAE-------------------------------TGYLNECRKIFSS 475
Query: 208 MQEQDVVSWSTIIAGYVQVG-CFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQ 266
M E D VSW++II + EA+ F + G K N TF S L+A S+L +
Sbjct: 476 MPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGEL 535
Query: 267 GKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFA 326
GK IH + I ++I Y KCGE++ ++F +R WN+MI G+
Sbjct: 536 GKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYI 595
Query: 327 MHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEI 386
+ ++A+ + M + + +L+A + +E G V + ++
Sbjct: 596 HNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRAC-LESDV 654
Query: 387 EHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIK- 445
+VD+ S+ G L A ++MP+ + W ++++ + E ++ +K
Sbjct: 655 VVGSALVDMYSKCGRLDYALRFFNTMPVRNSYS-WNSMISGYARHGQGEEALKLFETMKL 713
Query: 446 --EMDPNHV 452
+ P+HV
Sbjct: 714 DGQTPPDHV 722
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/421 (23%), Positives = 175/421 (41%), Gaps = 48/421 (11%)
Query: 20 LASLVDTCKSIQQI-----KQTHAQLVTTALISHHVSANKFLKLV--ADASLSYAHKLFD 72
S++ C+ I + +Q H + + V +N + + S+ YA F
Sbjct: 105 FVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFG 164
Query: 73 QIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLT--RDSGLSPNRYSF--VFTFGACGN 128
I + +N++I +S D FR+ + + G P Y+F + T
Sbjct: 165 DIEVKNSVSWNSIISVYS----QAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLT 220
Query: 129 GLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTM 188
V+ EQ+ K GL +++FV + L+ + K G + Y RKVF ++ + N +
Sbjct: 221 EPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGL 280
Query: 189 IAAYVGSGNMSQAKELFDEMQEQ-DVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPN 247
+ V +A +LF +M DV S +I +L P
Sbjct: 281 MVGLVRQKWGEEATKLFMDMNSMIDVSPESYVI------------------LLSSFP--- 319
Query: 248 EYTFVSALAACSNLVALDQGKWIHS-FIGRGEIKMNERLLASIIDMYAKCGEIESASRVF 306
EY+ V L +G+ +H I G + + +++MYAKCG I A RVF
Sbjct: 320 EYSLAEE-------VGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVF 372
Query: 307 WEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMV 366
+ K V WN+MI G +G EA++ ++ M+ ++ P T ++ L++C+
Sbjct: 373 YFMTDKDSV-SWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWA 431
Query: 367 EEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLN 426
+ G+ + GI + ++ L + G L E + SSMP V+ W +++
Sbjct: 432 KLGQQIHGESLK-LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVS-WNSIIG 489
Query: 427 A 427
A
Sbjct: 490 A 490
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 351 bits (901), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 211/591 (35%), Positives = 314/591 (53%), Gaps = 63/591 (10%)
Query: 40 LVTTALISHHVSANKFLKLVADASLSYAHKLFDQIPQPDLF--IYNTMIKAHSLSPSSCN 97
V TALIS + LVADA K+F++ PQ YN +I ++ + S
Sbjct: 89 FVLTALISMYCKCG----LVADA-----RKVFEENPQSSQLSVCYNALISGYT-ANSKVT 138
Query: 98 DSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNAL 157
D+ +FR + +++G+S + + + C + G + VK GLDS V V+N+
Sbjct: 139 DAAYMFRRM-KETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSF 197
Query: 158 IGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWS 217
I MY K G++ + LFDEM + +++W+
Sbjct: 198 ITMYMK-------------------------------CGSVEAGRRLFDEMPVKGLITWN 226
Query: 218 TIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRG 277
+I+GY Q G + L+ + +M G P+ +T VS L++C++L A G + +
Sbjct: 227 AVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESN 286
Query: 278 EIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKV 337
N + + I MYA+CG + A VF K V W AMIG + MHG + +
Sbjct: 287 GFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLV-SWTAMIGCYGMHGMGEIGLML 345
Query: 338 FQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLS 397
F M + P+ FV +L+ACSH + ++G FR M +Y + P EHY C+VDLL
Sbjct: 346 FDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLG 405
Query: 398 RAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVL 457
RAG L EA + I SMP+ PD A+WGA+L AC+I+K+++ + E +PN++G +VL
Sbjct: 406 RAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVL 465
Query: 458 LGNIYSSS----GRWNDARMLREKSEISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSR 513
+ NIYS S G W M+RE+ A +K PG S +E G + FL GDRSH Q+
Sbjct: 466 MSNIYSDSKNQEGIWRIRVMMRER-----AFRKKPGYSYVEHKGRVHLFLAGDRSHEQTE 520
Query: 514 ELYSFLDEM-TTKLKIAGYVPVFGXXXXXXXXXXXXXTALSVHSEKLAIAFGLLNTAPGT 572
E++ LDE+ T+ +++AG + + HSE+LAIAFG+LN+ PGT
Sbjct: 521 EVHRMLDELETSVMELAGNMDC--------DRGEEVSSTTREHSERLAIAFGILNSIPGT 572
Query: 573 PIRIVKNLRVCRDCHQVTKFISKVYDRVIIVRDRTRYHHFKDGICSCKDYW 623
I ++KNLRVC DCH K +SK+ DR +VRD +R+H+FKDG+CSCKDYW
Sbjct: 573 EILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDGVCSCKDYW 623
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 111/444 (25%), Positives = 192/444 (43%), Gaps = 89/444 (20%)
Query: 80 FIYNTMIKAHSLSP-----------SSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGN 128
F+ N+ + A + +P S ++S+ ++R + R SG SP+ +SF F +C +
Sbjct: 7 FVRNSAVAAVASTPWNVRLRELAYQSLFSESISLYRSMLR-SGSSPDAFSFPFILKSCAS 65
Query: 129 GLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYS--WN 186
G+Q+ H K G ++ FV+ ALI MY K GLV RKVFE S +N
Sbjct: 66 LSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYN 125
Query: 187 TMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKP 246
+I+ Y + ++ A +F M+E V S + G V +
Sbjct: 126 ALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPL-------------------- 165
Query: 247 NEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVF 306
C+ L G+ +H +G + +L S I MY KCG +E+ R+F
Sbjct: 166 -----------CTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLF 214
Query: 307 WEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMV 366
E K + WNA+I G++ +G + ++++++MK V P+ T V++L++C+H
Sbjct: 215 DEMPVKGLI-TWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAK 273
Query: 367 EEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMA----------- 415
+ G +L+ S+ G +P + + + +R G L +A + MP+
Sbjct: 274 KIGHEVGKLVESN-GFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGC 332
Query: 416 -----------------------PDVAIWGAVLNACRIYKDMERGYRIGRIIK-----EM 447
PD A++ VL+AC ++G + R +K E
Sbjct: 333 YGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEP 392
Query: 448 DPNHVGCHVLLGNIYSSSGRWNDA 471
P H C V ++ +GR ++A
Sbjct: 393 GPEHYSCLV---DLLGRAGRLDEA 413
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 140/348 (40%), Gaps = 37/348 (10%)
Query: 34 KQTHAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIPQPDLFIYNTMIKAHSLS 92
+ H Q V L S N F+ + S+ +LFD++P L +N +I +S +
Sbjct: 176 RSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQN 235
Query: 93 PSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVF 152
+ D L ++ + + SG+ P+ ++ V +C + + + G +V G NVF
Sbjct: 236 GLA-YDVLELYEQM-KSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVF 293
Query: 153 VVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQD 212
V NA I MY + G + R VF+ K L SW MI Y G LFD+
Sbjct: 294 VSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDD----- 348
Query: 213 VVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHS 272
M++ G +P+ FV L+ACS+ D+G +
Sbjct: 349 --------------------------MIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFR 382
Query: 273 FIGRG-EIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKP 331
+ R +++ + ++D+ + G ++ A + W A++G +H
Sbjct: 383 AMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNV 442
Query: 332 SEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSD 379
A F KV PN + + L++ +EG R+M+ +
Sbjct: 443 DMAELAFA--KVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRE 488
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 351 bits (901), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 185/502 (36%), Positives = 299/502 (59%), Gaps = 10/502 (1%)
Query: 30 IQQIKQTHA-QLVTTALISHHVSANKFL--KLV----ADASLSYAHKLFDQIPQPDLFIY 82
+Q++K + + + ++I H +S + F+ K+V + YA +LF+Q+ P++F+Y
Sbjct: 17 LQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLY 76
Query: 83 NTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHA 142
N++I+A++ + C D + +++ L R S P+R++F F F +C + S G+QV H
Sbjct: 77 NSIIRAYTHNSLYC-DVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHL 135
Query: 143 VKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAK 202
K G +V NALI MY K+ + KVF+ ++D+ SWN++++ Y G M +AK
Sbjct: 136 CKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAK 195
Query: 203 ELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLV 262
LF M ++ +VSW+ +I+GY +GC++EA+DFF M G +P+E + +S L +C+ L
Sbjct: 196 GLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLG 255
Query: 263 ALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMI 322
+L+ GKWIH + R + ++I+MY+KCG I A ++F + K V W+ MI
Sbjct: 256 SLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGK-DVISWSTMI 314
Query: 323 GGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGI 382
G+A HG AI+ F +M+ V PN +TF+ LL+ACSH M +EG YF +M DY I
Sbjct: 315 SGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQI 374
Query: 383 IPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGR 442
P+IEHYGC++D+L+RAG L+ A ++ +MPM PD IWG++L++CR +++
Sbjct: 375 EPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMD 434
Query: 443 IIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNGTFYQF 502
+ E++P +G +VLL NIY+ G+W D LR+ + KK PG S IE+N +F
Sbjct: 435 HLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIR-NENMKKTPGGSLIEVNNIVQEF 493
Query: 503 LVGDRSHPQSRELYSFLDEMTT 524
+ GD S P E+ L T+
Sbjct: 494 VSGDNSKPFWTEISIVLQLFTS 515
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 351 bits (900), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 202/598 (33%), Positives = 317/598 (53%), Gaps = 46/598 (7%)
Query: 59 VADASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYS 118
V + + A LF ++P+ + + M+ L +D+ ++ ++ ++ R S
Sbjct: 121 VHNGKVDVAESLFWKMPEKNKVSWTVMLIGF-LQDGRIDDACKLYEMIPDKDNIA--RTS 177
Query: 119 FVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAV 178
+ G C G V E ++ + +V ++ YG+ V+ RK+F+
Sbjct: 178 MIH--GLCKEG-RVDEAREIFDEMS----ERSVITWTTMVTGYGQNNRVDDARKIFDVMP 230
Query: 179 DKDLYSWNTMIAAYVGSGNMSQAKELF-------------------------------DE 207
+K SW +M+ YV +G + A+ELF D
Sbjct: 231 EKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDS 290
Query: 208 MQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQG 267
M+E++ SW T+I + + G +EALD F M + G +P T +S L+ C++L +L G
Sbjct: 291 MKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHG 350
Query: 268 KWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAM 327
K +H+ + R + ++ + + ++ MY KCGE+ S++ ++ + + WN++I G+A
Sbjct: 351 KQVHAQLVRCQFDVDVYVASVLMTMYIKCGEL-VKSKLIFDRFPSKDIIMWNSIISGYAS 409
Query: 328 HGKPSEAIKVFQKMKVE-NVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEI 386
HG EA+KVF +M + + PN+VTFVA L+ACS+ MVEEG + M S +G+ P
Sbjct: 410 HGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPIT 469
Query: 387 EHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKE 446
HY CMVD+L RAG EA +MI SM + PD A+WG++L ACR + ++ + + E
Sbjct: 470 AHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIE 529
Query: 447 MDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNGTFYQFLVGD 506
++P + G ++LL N+Y+S GRW D LR K + +K PGCS E+ + F G
Sbjct: 530 IEPENSGTYILLSNMYASQGRWADVAELR-KLMKTRLVRKSPGCSWTEVENKVHAFTRGG 588
Query: 507 -RSHPQSRELYSFLDEMTTKLKIAGYVPVFGXXXXXXXXXXXXXTALSVHSEKLAIAFGL 565
SHP+ + LDE+ L+ AGY P +L HSE+LA+A+ L
Sbjct: 589 INSHPEQESILKILDELDGLLREAGYNPDCS-YALHDVDEEEKVNSLKYHSERLAVAYAL 647
Query: 566 LNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRVIIVRDRTRYHHFKDGICSCKDYW 623
L + G PIR++KNLRVC DCH K ISKV +R II+RD R+HHF++G CSCKDYW
Sbjct: 648 LKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 125/271 (46%), Gaps = 19/271 (7%)
Query: 155 NALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVV 214
N+++ Y + RK+F+ D+++ SWN +++ Y+ +G + +A+++FD M E++VV
Sbjct: 52 NSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVV 111
Query: 215 SWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFI 274
SW+ ++ GYV G A F +M P+ N+ ++ L +D ++ I
Sbjct: 112 SWTALVKGYVHNGKVDVAESLFWKM----PEKNKVSWTVMLIGFLQDGRIDDACKLYEMI 167
Query: 275 GRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEA 334
+ S+I K G ++ A +F + ++R V W M+ G+ + + +A
Sbjct: 168 P----DKDNIARTSMIHGLCKEGRVDEAREIF-DEMSERSVITWTTMVTGYGQNNRVDDA 222
Query: 335 IKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVD 394
K+F M +V++ ++L +E+ + F +M + + M+
Sbjct: 223 RKIFDVMP----EKTEVSWTSMLMGYVQNGRIEDAEELFEVMP-----VKPVIACNAMIS 273
Query: 395 LLSRAGLLKEAEDMISSMPMAPDVAIWGAVL 425
L + G + +A + SM D A W V+
Sbjct: 274 GLGQKGEIAKARRVFDSMKERND-ASWQTVI 303
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 148 DSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDE 207
D N+ N L+ Y K G ++ RKVF+ ++++ SW ++ YV +G + A+ LF +
Sbjct: 76 DRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWK 135
Query: 208 MQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQG 267
M E++ VSW+ ++ G++Q G +A + + P + S + +D+
Sbjct: 136 MPEKNKVSWTVMLIGFLQDGRIDDACKLYEMI----PDKDNIARTSMIHGLCKEGRVDEA 191
Query: 268 KWIHSFIGRGEIKMNERLL---ASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGG 324
+ I +M+ER + +++ Y + ++ A ++F K +V W +M+ G
Sbjct: 192 REIFD-------EMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEV-SWTSMLMG 243
Query: 325 FAMHGKPSEAIKVFQKMKVENV 346
+ +G+ +A ++F+ M V+ V
Sbjct: 244 YVQNGRIEDAEELFEVMPVKPV 265
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 125/293 (42%), Gaps = 74/293 (25%)
Query: 155 NALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVV 214
N I + G + RK+F+ K + SWN+M+A Y + A++LFDEM +++++
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNII 80
Query: 215 SWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFI 274
SW+ +++GY++ G EA F M P+ N ++
Sbjct: 81 SWNGLVSGYMKNGEIDEARKVFDLM----PERNVVSW----------------------- 113
Query: 275 GRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEA 334
+++ Y G+++ A +FW+ K KV W M+ GF G+ +A
Sbjct: 114 ------------TALVKGYVHNGKVDVAESLFWKMPEKNKV-SWTVMLIGFLQDGRIDDA 160
Query: 335 IKVFQKMKVENVSPNK--VTFVALLNA-CSHGY----------MVEEGKLYFRLMVSDYG 381
K+++ + P+K + ++++ C G M E + + MV+ YG
Sbjct: 161 CKLYEMI------PDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYG 214
Query: 382 -------------IIPEIEH--YGCMVDLLSRAGLLKEAEDMISSMPMAPDVA 419
++PE + M+ + G +++AE++ MP+ P +A
Sbjct: 215 QNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIA 267
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 349 bits (895), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 201/547 (36%), Positives = 295/547 (53%), Gaps = 7/547 (1%)
Query: 80 FIYNTMIK-AHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQV 138
F+++ I+ A ++ S C L RL ++ G N S+ +E +
Sbjct: 326 FLFDQNIRTALMVAYSKCTAMLDALRLF-KEIGCVGNVVSWTAMISGFLQNDGKEEAVDL 384
Query: 139 RSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNM 198
S + G+ N F + ++ E +V + ++ ++ AYV G +
Sbjct: 385 FSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKV 444
Query: 199 SQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAAC 258
+A ++F + ++D+V+WS ++AGY Q G A+ F + + G KPNE+TF S L C
Sbjct: 445 EEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVC 504
Query: 259 SNLVA-LDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWP 317
+ A + QGK H F + + + + ++++ MYAK G IESA VF K V
Sbjct: 505 AATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLV-S 563
Query: 318 WNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMV 377
WN+MI G+A HG+ +A+ VF++MK V + VTF+ + AC+H +VEEG+ YF +MV
Sbjct: 564 WNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMV 623
Query: 378 SDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERG 437
D I P EH CMVDL SRAG L++A +I +MP IW +L ACR++K E G
Sbjct: 624 RDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELG 683
Query: 438 YRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNG 497
I M P +VLL N+Y+ SG W + +R K KK PG S IE+
Sbjct: 684 RLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVR-KLMNERNVKKEPGYSWIEVKN 742
Query: 498 TFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVFGXXXXXXXXXXXXXTALSVHSE 557
Y FL GDRSHP ++Y L++++T+LK GY P L+ HSE
Sbjct: 743 KTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPD-TSYVLQDIDDEHKEAVLAQHSE 801
Query: 558 KLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRVIIVRDRTRYHHF-KDGI 616
+LAIAFGL+ T G+P+ I+KNLRVC DCH V K I+K+ +R I+VRD R+HHF DG+
Sbjct: 802 RLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGV 861
Query: 617 CSCKDYW 623
CSC D+W
Sbjct: 862 CSCGDFW 868
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 169/359 (47%), Gaps = 39/359 (10%)
Query: 67 AHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGAC 126
K+FD++ + ++ + T+I ++ +S ND ++ + ++ G PN ++F G
Sbjct: 147 GRKVFDEMKERNVVTWTTLISGYA--RNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVL 204
Query: 127 GNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWN 186
G QV + VK GLD + V N+LI +
Sbjct: 205 AEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINL-------------------------- 238
Query: 187 TMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKP 246
Y+ GN+ +A+ LFD+ + + VV+W+++I+GY G +EAL F+ M +
Sbjct: 239 -----YLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRL 293
Query: 247 NEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVF 306
+E +F S + C+NL L + +H + + ++ + +++ Y+KC + A R+F
Sbjct: 294 SESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLF 353
Query: 307 WEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMV 366
E V W AMI GF + EA+ +F +MK + V PN+ T+ +L A ++
Sbjct: 354 KEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP---VI 410
Query: 367 EEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVL 425
+++ +++ ++Y + ++D + G ++EA + S + D+ W A+L
Sbjct: 411 SPSEVHAQVVKTNYERSSTVGT--ALLDAYVKLGKVEEAAKVFSGID-DKDIVAWSAML 466
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 138/259 (53%), Gaps = 7/259 (2%)
Query: 109 DSGLSPNRYSFV-FTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLV 167
D +R S++ FG +G + QE +++ + ++G++ + + ++++ +
Sbjct: 51 DKSPGRDRESYISLLFGFSRDGRT-QEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDE 109
Query: 168 EYGRKV----FEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGY 223
+GR++ ++ D+ +++ Y+ N +++FDEM+E++VV+W+T+I+GY
Sbjct: 110 LFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGY 169
Query: 224 VQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNE 283
+ E L F RM G +PN +TF +AL + +G +H+ + + +
Sbjct: 170 ARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTI 229
Query: 284 RLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKV 343
+ S+I++Y KCG + A R+ ++ + V WN+MI G+A +G EA+ +F M++
Sbjct: 230 PVSNSLINLYLKCGNVRKA-RILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRL 288
Query: 344 ENVSPNKVTFVALLNACSH 362
V ++ +F +++ C++
Sbjct: 289 NYVRLSESSFASVIKLCAN 307
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 347 bits (890), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 193/637 (30%), Positives = 322/637 (50%), Gaps = 65/637 (10%)
Query: 18 CRLASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIPQ 76
C L + +++++ K+ H + T+ + V N+ L++ A SL A K+FD++P
Sbjct: 89 CNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPN 148
Query: 77 PDLFIYNTMIKAHS------------------------------LSPSSCNDSLMVFRLL 106
DL +N M+ ++ + ++L+++ L+
Sbjct: 149 RDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLM 208
Query: 107 TRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGL 166
R PN ++ A ++ G+++ H V+ GLDS+ + ++L+ MYGK
Sbjct: 209 QRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGK--- 265
Query: 167 VEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQV 226
G + +A+ +FD++ E+DVVSW+++I Y +
Sbjct: 266 ----------------------------CGCIDEARNIFDKIVEKDVVSWTSMIDRYFKS 297
Query: 227 GCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLL 286
+ E F ++ +PNEYTF L AC++L + GK +H ++ R
Sbjct: 298 SRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFAS 357
Query: 287 ASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENV 346
+S++DMY KCG IESA V + K + W ++IGG A +G+P EA+K F +
Sbjct: 358 SSLVDMYTKCGNIESAKHVV-DGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGT 416
Query: 347 SPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAE 406
P+ VTFV +L+AC+H +VE+G +F + + + +HY C+VDLL+R+G ++ +
Sbjct: 417 KPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLK 476
Query: 407 DMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSG 466
+IS MPM P +W +VL C Y +++ + + +++P + +V + NIY+++G
Sbjct: 477 SVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAG 536
Query: 467 RWNDARMLREKSEISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKL 526
+W + +R++ + TK+ PG S E+ + F+ D SHP ++ FL E+ K+
Sbjct: 537 KWEEEGKMRKRMQEIGVTKR-PGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKM 595
Query: 527 KIAGYVPVFGXXXXXXXXXXXXXTALSVHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDC 586
K GYVP L HSEKLA+AF +L+T GT I++ KNLR C DC
Sbjct: 596 KEEGYVPATSLVLHDVEDEQKEEN-LVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDC 654
Query: 587 HQVTKFISKVYDRVIIVRDRTRYHHFKDGICSCKDYW 623
H KFIS + R I VRD TR+H F++G CSC DYW
Sbjct: 655 HGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 5/153 (3%)
Query: 224 VQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNE 283
+ V C + L ++L KP T+ + + CS AL++GK +H I
Sbjct: 61 IDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGI 120
Query: 284 RLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKV 343
+ ++ MYAKCG + A +VF + R + WN M+ G+A G EA K+F +M
Sbjct: 121 VIWNRLLRMYAKCGSLVDARKVF-DEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEM-- 177
Query: 344 ENVSPNKVTFVALLNACSHGYMVEEGKLYFRLM 376
+ ++ A++ EE + + LM
Sbjct: 178 --TEKDSYSWTAMVTGYVKKDQPEEALVLYSLM 208
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 345 bits (884), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 194/598 (32%), Positives = 321/598 (53%), Gaps = 42/598 (7%)
Query: 30 IQQIKQTHAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIPQPDLFIYNTMIKA 88
+ +K+ H + + + + AN F+ A SLSYA ++F I + +N +I
Sbjct: 411 LPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGG 470
Query: 89 HSLSPSSCNDSLMVF--RLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVG 146
H+ S ND + L + SGL P+ ++ AC S++ G++V ++
Sbjct: 471 HAQS----NDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIR-- 524
Query: 147 LDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFD 206
W +++DL+ + ++++ Y+ G + + LFD
Sbjct: 525 ----------------NW-------------LERDLFVYLSVLSLYIHCGELCTVQALFD 555
Query: 207 EMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQ 266
M+++ +VSW+T+I GY+Q G AL F +M+ G + + + ACS L +L
Sbjct: 556 AMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRL 615
Query: 267 GKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFA 326
G+ H++ + ++ + + S+IDMYAK G I +S+VF ++ WNAMI G+
Sbjct: 616 GREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVF-NGLKEKSTASWNAMIMGYG 674
Query: 327 MHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEI 386
+HG EAIK+F++M+ +P+ +TF+ +L AC+H ++ EG Y M S +G+ P +
Sbjct: 675 IHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNL 734
Query: 387 EHYGCMVDLLSRAGLLKEAEDMISS-MPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIK 445
+HY C++D+L RAG L +A +++ M DV IW ++L++CRI++++E G ++ +
Sbjct: 735 KHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLF 794
Query: 446 EMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNGTFYQFLVG 505
E++P +VLL N+Y+ G+W D R +R++ + +K GCS IELN + F+VG
Sbjct: 795 ELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMN-EMSLRKDAGCSWIELNRKVFSFVVG 853
Query: 506 DRSHPQSRELYSFLDEMTTKLKIAGYVPVFGXXXXXXXXXXXXXTALSVHSEKLAIAFGL 565
+R E+ S + K+ GY P L HSEKLA+ +GL
Sbjct: 854 ERFLDGFEEIKSLWSILEMKISKMGYRPD-TMSVQHDLSEEEKIEQLRGHSEKLALTYGL 912
Query: 566 LNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRVIIVRDRTRYHHFKDGICSCKDYW 623
+ T+ GT IR+ KNLR+C DCH K ISKV +R I+VRD R+HHFK+G+CSC DYW
Sbjct: 913 IKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 156/340 (45%), Gaps = 35/340 (10%)
Query: 28 KSIQQIKQTHAQLVT--TALISHHVSANKFLKLVAD-ASLSYAHKLFDQIPQPDLFIYNT 84
K I+ ++ H QLV+ T L + V + + + A S + +FD + +LF +N
Sbjct: 98 KDIEMGRKIH-QLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNA 156
Query: 85 MIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVK 144
+I ++S + ++ L F + + L P+ +++ AC V G V VK
Sbjct: 157 VISSYSRNELY-DEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVK 215
Query: 145 VGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKEL 204
GL +VFV NAL+ YG G V ++F+ +++L SWN+MI + +G ++ L
Sbjct: 216 TGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLL 275
Query: 205 FDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVAL 264
EM E++ G FM P+ T V+ L C+ +
Sbjct: 276 LGEMMEEN------------GDGAFM---------------PDVATLVTVLPVCAREREI 308
Query: 265 DQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGG 324
GK +H + + + L +++DMY+KCG I +A +F + N + V WN M+GG
Sbjct: 309 GLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIF-KMNNNKNVVSWNTMVGG 367
Query: 325 FAMHGKPSEAIKVFQKMKV--ENVSPNKVTFVALLNACSH 362
F+ G V ++M E+V ++VT + + C H
Sbjct: 368 FSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH 407
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 147/341 (43%), Gaps = 39/341 (11%)
Query: 36 THAQLVTTALISHHVSANKFLKLVADAS-LSYAHKLFDQIPQPDLFIYNTMIKAHSLSPS 94
H +V T L+ N + ++ A +LFD +P+ +L +N+MI+ S +
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGF 268
Query: 95 SCNDSLMVFRLLTR--DSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVF 152
S L++ ++ D P+ + V C + G+ V AVK+ LD
Sbjct: 269 SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLD---- 324
Query: 153 VVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQD 212
K+L N ++ Y G ++ A+ +F ++
Sbjct: 325 ---------------------------KELVLNNALMDMYSKCGCITNAQMIFKMNNNKN 357
Query: 213 VVSWSTIIAGYVQVGCFMEALDFFHRMLQVGP--KPNEYTFVSALAACSNLVALDQGKWI 270
VVSW+T++ G+ G D +ML G K +E T ++A+ C + L K +
Sbjct: 358 VVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKEL 417
Query: 271 HSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRK-VWPWNAMIGGFAMHG 329
H + + E NE + + + YAKCG + A RVF H + K V WNA+IGG A
Sbjct: 418 HCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVF--HGIRSKTVNSWNALIGGHAQSN 475
Query: 330 KPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGK 370
P ++ +MK+ + P+ T +LL+ACS + GK
Sbjct: 476 DPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGK 516
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 146/346 (42%), Gaps = 37/346 (10%)
Query: 18 CRLASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKL-VADASLSYAHKLFDQIPQ 76
C L S KS++ K+ H ++ L L L + L LFD +
Sbjct: 500 CSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMED 559
Query: 77 PDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGE 136
L +NT+I + L + +L VFR + G+ S + FGAC S++ G
Sbjct: 560 KSLVSWNTVITGY-LQNGFPDRALGVFRQMVL-YGIQLCGISMMPVFGACSLLPSLRLGR 617
Query: 137 QVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSG 196
+ ++A+K L+ + F+ +LI MY K G + KVF +K SWN MI Y G
Sbjct: 618 EAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHG 677
Query: 197 NMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALA 256
+A +LF+EMQ + G P++ TF+ L
Sbjct: 678 LAKEAIKLFEEMQ-------------------------------RTGHNPDDLTFLGVLT 706
Query: 257 ACSNLVALDQG-KWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKR-K 314
AC++ + +G +++ +K N + A +IDM + G+++ A RV E ++
Sbjct: 707 ACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEAD 766
Query: 315 VWPWNAMIGGFAMHGKPSEAIKVFQKM-KVENVSPNKVTFVALLNA 359
V W +++ +H KV K+ ++E P ++ L A
Sbjct: 767 VGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYA 812
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 344 bits (882), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 189/505 (37%), Positives = 299/505 (59%), Gaps = 8/505 (1%)
Query: 28 KSIQQIKQTHAQLVTTALISHHVSANKFLKLVADAS-LSYAHKLFDQIPQPDLFIYNTMI 86
+++ +KQ+H ++ T L +++ KF++ ++A L YA+ +F P P+ +++NTMI
Sbjct: 26 NNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMI 85
Query: 87 KAHSL--SPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVK 144
+A SL P++ + ++ V+R L P+ ++F F V G Q+ V
Sbjct: 86 RALSLLDEPNAHSIAITVYRKLWALCA-KPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVV 144
Query: 145 VGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKEL 204
G DS+V VV LI MY G + RK+F+ + KD+ WN ++A Y G M +A+ L
Sbjct: 145 FGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSL 204
Query: 205 FDEMQ--EQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLV 262
+ M ++ VSW+ +I+GY + G EA++ F RML +P+E T ++ L+AC++L
Sbjct: 205 LEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLG 264
Query: 263 ALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMI 322
+L+ G+ I S++ + L ++IDMYAK G I A VF E +R V W +I
Sbjct: 265 SLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVF-ECVNERNVVTWTTII 323
Query: 323 GGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGI 382
G A HG +EA+ +F +M V PN VTF+A+L+ACSH V+ GK F M S YGI
Sbjct: 324 AGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGI 383
Query: 383 IPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGR 442
P IEHYGCM+DLL RAG L+EA+++I SMP + AIWG++L A ++ D+E G R
Sbjct: 384 HPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALS 443
Query: 443 IIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNGTFYQF 502
+ +++PN+ G ++LL N+YS+ GRW+++RM+R + KK+ G SSIE+ Y+F
Sbjct: 444 ELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMK-GIGVKKMAGESSIEVENRVYKF 502
Query: 503 LVGDRSHPQSRELYSFLDEMTTKLK 527
+ GD +HPQ ++ L EM +++
Sbjct: 503 ISGDLTHPQVERIHEILQEMDLQIQ 527
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 341 bits (874), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 208/636 (32%), Positives = 312/636 (49%), Gaps = 80/636 (12%)
Query: 34 KQTHAQLVTTALISHHVSANKFLKLVADASL-SYAHKLFDQIPQPDLFIYNTMIKAHSLS 92
KQ H VT+ +I + N + + A + A+ +F + D+ +N M+ +S
Sbjct: 249 KQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYS-Q 307
Query: 93 PSSCNDSLMVFRLLTRD----------------------------------SGLSPNRYS 118
D++ +F + + SG+ PN +
Sbjct: 308 IGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVT 367
Query: 119 FVFTFGACGNGLSVQEGEQVRSHAVKVGLD-------SNVFVVNALIGMYGKWGLVEYGR 171
+ C + ++ G+++ +A+K +D V+N LI MY K V+ R
Sbjct: 368 LISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTAR 427
Query: 172 KVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFME 231
+F+ K E+DVV+W+ +I GY Q G +
Sbjct: 428 AMFDSLSPK-----------------------------ERDVVTWTVMIGGYSQHGDANK 458
Query: 232 ALDFFHRMLQ--VGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLAS- 288
AL+ M + +PN +T AL AC++L AL GK IH++ R + +++
Sbjct: 459 ALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNC 518
Query: 289 IIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSP 348
+IDMYAKCG I A VF AK +V W +++ G+ MHG EA+ +F +M+
Sbjct: 519 LIDMYAKCGSISDARLVFDNMMAKNEV-TWTSLMTGYGMHGYGEEALGIFDEMRRIGFKL 577
Query: 349 NKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDM 408
+ VT + +L ACSH M+++G YF M + +G+ P EHY C+VDLL RAG L A +
Sbjct: 578 DGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRL 637
Query: 409 ISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRW 468
I MPM P +W A L+ CRI+ +E G I E+ NH G + LL N+Y+++GRW
Sbjct: 638 IEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRW 697
Query: 469 NDARMLREKSEISTATKKIPGCSSIE-LNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLK 527
D +R KK PGCS +E + GT F VGD++HP ++E+Y L + ++K
Sbjct: 698 KDVTRIRSLMR-HKGVKKRPGCSWVEGIKGT-TTFFVGDKTHPHAKEIYQVLLDHMQRIK 755
Query: 528 IAGYVPVFGXXXXXXXXXXXXXTALSVHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCH 587
GYVP G L HSEKLA+A+G+L T G IRI KNLRVC DCH
Sbjct: 756 DIGYVPETG-FALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCH 814
Query: 588 QVTKFISKVYDRVIIVRDRTRYHHFKDGICSCKDYW 623
++S++ D II+RD +R+HHFK+G CSCK YW
Sbjct: 815 TAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 181/364 (49%), Gaps = 36/364 (9%)
Query: 23 LVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVADASLSYAHKLFDQIPQPDLFIY 82
+ CK+I Q+K H +L++ +++ +++++ ++ LS+A L + P D +Y
Sbjct: 34 FIHKCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVY 93
Query: 83 --NTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRS 140
N++I+++ N L +F L+ S +P+ Y+F F F ACG SV+ GE +
Sbjct: 94 HWNSLIRSYG-DNGCANKCLYLFGLMHSLS-WTPDNYTFPFVFKACGEISSVRCGESAHA 151
Query: 141 HAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQ 200
++ G SNVFV NAL+ MY + + RKVF+ D+ SWN++I +Y G
Sbjct: 152 LSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKV 211
Query: 201 AKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSN 260
A E+F M + GC +P+ T V+ L C++
Sbjct: 212 ALEMFSRMTN--------------EFGC----------------RPDNITLVNVLPPCAS 241
Query: 261 LVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNA 320
L GK +H F E+ N + ++DMYAKCG ++ A+ VF + K V WNA
Sbjct: 242 LGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK-DVVSWNA 300
Query: 321 MIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDY 380
M+ G++ G+ +A+++F+KM+ E + + VT+ A ++ + + E R M+S
Sbjct: 301 MVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSS- 359
Query: 381 GIIP 384
GI P
Sbjct: 360 GIKP 363
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 340 bits (872), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 200/593 (33%), Positives = 296/593 (49%), Gaps = 40/593 (6%)
Query: 34 KQTHAQLVTTALISHHVSANKFLKLVA--DASLSYAHKLFDQIPQPDLFIYNTMIKAHSL 91
+Q HA VTT N+ L + D L LFD++P+ D YN +I ++S
Sbjct: 270 QQLHALSVTTGFSRDASVGNQILDFYSKHDRVLE-TRMLFDEMPELDFVSYNVVISSYS- 327
Query: 92 SPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNV 151
SL FR + + G + F N S+Q G Q+ A+ DS +
Sbjct: 328 QADQYEASLHFFREM-QCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSIL 386
Query: 152 FVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQ 211
V N+L+ MY K + E +A+ +F + ++
Sbjct: 387 HVGNSLVDMYAKCEMFE-------------------------------EAELIFKSLPQR 415
Query: 212 DVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIH 271
VSW+ +I+GYVQ G L F +M + ++ TF + L A ++ +L GK +H
Sbjct: 416 TTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLH 475
Query: 272 SFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKP 331
+FI R N + ++DMYAKCG I+ A +VF E R WNA+I A +G
Sbjct: 476 AFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVF-EEMPDRNAVSWNALISAHADNGDG 534
Query: 332 SEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGC 391
AI F KM + P+ V+ + +L ACSH VE+G YF+ M YGI P+ +HY C
Sbjct: 535 EAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYAC 594
Query: 392 MVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDP-N 450
M+DLL R G EAE ++ MP PD +W +VLNACRI+K+ R + M+
Sbjct: 595 MLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLR 654
Query: 451 HVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNGTFYQFLVGDRSHP 510
+V + NIY+++G W R ++ K+ KK+P S +E+N + F D++HP
Sbjct: 655 DAAAYVSMSNIYAAAGEWEKVRDVK-KAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHP 713
Query: 511 QSRELYSFLDEMTTKLKIAGYVPVFGXXXXXXXXXXXXXTALSVHSEKLAIAFGLLNTAP 570
E+ ++E+T +++ GY P +L HSE+LA+AF L++T
Sbjct: 714 NGDEIVRKINELTAEIEREGYKPD-TSSVVQDVDEQMKIESLKYHSERLAVAFALISTPE 772
Query: 571 GTPIRIVKNLRVCRDCHQVTKFISKVYDRVIIVRDRTRYHHFKDGICSCKDYW 623
G PI ++KNLR CRDCH K ISK+ R I VRD +R+HHF +G+CSC DYW
Sbjct: 773 GCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 115/230 (50%), Gaps = 5/230 (2%)
Query: 134 EGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYV 193
+ +V + +K G D++ N ++ + G V RKV++ K+ S NTMI+ +V
Sbjct: 31 DTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHV 90
Query: 194 GSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGP--KPNEYTF 251
+G++S A++LFD M ++ VV+W+ ++ Y + F EA F +M + P+ TF
Sbjct: 91 KTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTF 150
Query: 252 VSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLAS--IIDMYAKCGEIESASRVFWEH 309
+ L C++ V + +H+F + N L S ++ Y + ++ A +F E
Sbjct: 151 TTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEI 210
Query: 310 NAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNA 359
K V +N +I G+ G +E+I +F KM+ P+ TF +L A
Sbjct: 211 PEKDSV-TFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/389 (20%), Positives = 173/389 (44%), Gaps = 47/389 (12%)
Query: 42 TTALISHHVSANKFLKLVADASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLM 101
T +IS HV +S A LFD +P + + ++ ++ + S +++
Sbjct: 82 TNTMISGHVKT---------GDVSSARDLFDAMPDRTVVTWTILMGWYARN-SHFDEAFK 131
Query: 102 VFRLLTRDSGLS-PNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGM 160
+FR + R S + P+ +F C + + QV + AVK+G D+N F+ +
Sbjct: 132 LFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVS---- 187
Query: 161 YGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTII 220
N ++ +Y + A LF+E+ E+D V+++T+I
Sbjct: 188 -------------------------NVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLI 222
Query: 221 AGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIK 280
GY + G + E++ F +M Q G +P+++TF L A L G+ +H+
Sbjct: 223 TGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFS 282
Query: 281 MNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQK 340
+ + I+D Y+K + +R+ ++ + +N +I ++ + ++ F++
Sbjct: 283 RDASVGNQILDFYSKHDRVLE-TRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFRE 341
Query: 341 MKVENVSPNKVTFVALLNACSHGYMVEEGK-LYFRLMVSDYGIIPEIEHYG-CMVDLLSR 398
M+ F +L+ ++ ++ G+ L+ + +++ I H G +VD+ ++
Sbjct: 342 MQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLA---TADSILHVGNSLVDMYAK 398
Query: 399 AGLLKEAEDMISSMPMAPDVAIWGAVLNA 427
+ +EAE + S+P V+ W A+++
Sbjct: 399 CEMFEEAELIFKSLPQRTTVS-WTALISG 426
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 139/325 (42%), Gaps = 37/325 (11%)
Query: 20 LASLVDTCKSIQQIKQTHAQ-LVTTALISHHVSANKFLKLVADASL-SYAHKLFDQIPQP 77
+ S+ S+Q +Q H Q L+ TA HV N + + A + A +F +PQ
Sbjct: 357 MLSIAANLSSLQMGRQLHCQALLATADSILHV-GNSLVDMYAKCEMFEEAELIFKSLPQR 415
Query: 78 DLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQ 137
+ +I + + L +F + R S L ++ +F A + S+ G+Q
Sbjct: 416 TTVSWTALISGY-VQKGLHGAGLKLFTKM-RGSNLRADQSTFATVLKASASFASLLLGKQ 473
Query: 138 VRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGN 197
+ + ++ G NVF + L+ MY K G ++ +VFE D++ SWN +I+A+ +G+
Sbjct: 474 LHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGD 533
Query: 198 MSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAA 257
G +G F +M++ G +P+ + + L A
Sbjct: 534 ------------------------GEAAIGAFA-------KMIESGLQPDSVSILGVLTA 562
Query: 258 CSNLVALDQG-KWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVW 316
CS+ ++QG ++ + I ++ A ++D+ + G A ++ E +
Sbjct: 563 CSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEI 622
Query: 317 PWNAMIGGFAMHGKPSEAIKVFQKM 341
W++++ +H S A + +K+
Sbjct: 623 MWSSVLNACRIHKNQSLAERAAEKL 647
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 339 bits (870), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 175/443 (39%), Positives = 259/443 (58%), Gaps = 2/443 (0%)
Query: 181 DLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRML 240
DL N +I Y G + + ++F M D V+W+T+I+ V+ G F L +M
Sbjct: 442 DLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMR 501
Query: 241 QVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIE 300
+ P+ TF+ L C++L A GK IH + R + ++ ++I+MY+KCG +E
Sbjct: 502 KSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLE 561
Query: 301 SASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNAC 360
++SRVF E ++R V W MI + M+G+ +A++ F M+ + P+ V F+A++ AC
Sbjct: 562 NSSRVF-ERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYAC 620
Query: 361 SHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAI 420
SH +V+EG F M + Y I P IEHY C+VDLLSR+ + +AE+ I +MP+ PD +I
Sbjct: 621 SHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASI 680
Query: 421 WGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEI 480
W +VL ACR DME R+ R I E++P+ G +L N Y++ +W+ ++R+ +
Sbjct: 681 WASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKD 740
Query: 481 STATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVFGXXXX 540
TK PG S IE+ + F GD S PQS +Y L+ + + + GY+P
Sbjct: 741 KHITKN-PGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQ 799
Query: 541 XXXXXXXXXTALSVHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRV 600
+ HSE+LAIAFGLLNT PGTP++++KNLRVC DCH+VTK ISK+ R
Sbjct: 800 NLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGRE 859
Query: 601 IIVRDRTRYHHFKDGICSCKDYW 623
I+VRD R+H FKDG CSCKD W
Sbjct: 860 ILVRDANRFHLFKDGTCSCKDRW 882
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/449 (22%), Positives = 211/449 (46%), Gaps = 61/449 (13%)
Query: 24 VDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVADASLSYAH--------KLFDQI- 74
+ + ++ ++++ HA +++ L S + K + Y+H +F ++
Sbjct: 14 LSSSSNLNELRRIHALVISLGLDSSDFFSGKLID-------KYSHFREPASSLSVFRRVS 66
Query: 75 PQPDLFIYNTMIKAHS---LSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLS 131
P +++++N++I+A S L P + + F R+S +SP++Y+F AC
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEA-----LEFYGKLRESKVSPDKYTFPSVIKACAGLFD 121
Query: 132 VQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAA 191
+ G+ V + +G +S++FV NAL+ D+YS
Sbjct: 122 AEMGDLVYEQILDMGFESDLFVGNALV----------------------DMYS------- 152
Query: 192 YVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTF 251
G +++A+++FDEM +D+VSW+++I+GY G + EAL+ +H + P+ +T
Sbjct: 153 --RMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTV 210
Query: 252 VSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNA 311
S L A NL+ + QG+ +H F + + + ++ MY K A RVF E +
Sbjct: 211 SSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDV 270
Query: 312 KRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKL 371
+ V +N MI G+ E++++F + ++ P+ +T ++L AC H + K
Sbjct: 271 RDSV-SYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKY 328
Query: 372 YFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIY 431
+ M+ G + E ++D+ ++ G + A D+ +SM D W ++++
Sbjct: 329 IYNYMLK-AGFVLESTVRNILIDVYAKCGDMITARDVFNSME-CKDTVSWNSIISGYIQS 386
Query: 432 KDMERGYRIGR--IIKEMDPNHVGCHVLL 458
D+ ++ + +I E +H+ +L+
Sbjct: 387 GDLMEAMKLFKMMMIMEEQADHITYLMLI 415
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 167/371 (45%), Gaps = 37/371 (9%)
Query: 67 AHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGAC 126
A ++FD++ D YNTMI + L +S+ +F L P+ + AC
Sbjct: 261 ARRVFDEMDVRDSVSYNTMICGY-LKLEMVEESVRMF--LENLDQFKPDLLTVSSVLRAC 317
Query: 127 GNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWN 186
G+ + + + ++ +K G V N LI +Y K
Sbjct: 318 GHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAK----------------------- 354
Query: 187 TMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKP 246
G+M A+++F+ M+ +D VSW++II+GY+Q G MEA+ F M+ + +
Sbjct: 355 --------CGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQA 406
Query: 247 NEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVF 306
+ T++ ++ + L L GK +HS + I ++ + ++IDMYAKCGE+ + ++F
Sbjct: 407 DHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIF 466
Query: 307 WEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMV 366
V WN +I G + ++V +M+ V P+ TF+ L C+
Sbjct: 467 SSMGTGDTV-TWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAK 525
Query: 367 EEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLN 426
GK ++ +G E++ ++++ S+ G L+ + + M DV W ++
Sbjct: 526 RLGKEIHCCLLR-FGYESELQIGNALIEMYSKCGCLENSSRVFERMSRR-DVVTWTGMIY 583
Query: 427 ACRIYKDMERG 437
A +Y + E+
Sbjct: 584 AYGMYGEGEKA 594
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 95/178 (53%), Gaps = 6/178 (3%)
Query: 251 FVS-ALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEH 309
F+S AL++ SNL L + IH+ + + ++ +ID Y+ E S+ VF
Sbjct: 9 FISRALSSSSNLNEL---RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRV 65
Query: 310 NAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEG 369
+ + V+ WN++I F+ +G EA++ + K++ VSP+K TF +++ AC+ + E G
Sbjct: 66 SPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMG 125
Query: 370 KLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNA 427
L + ++ D G ++ +VD+ SR GLL A + MP+ D+ W ++++
Sbjct: 126 DLVYEQIL-DMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR-DLVSWNSLISG 181
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 24/249 (9%)
Query: 69 KLFDQIPQPDLFIYNTMIKAHSLSPSSC---NDSLMVFRLLT--RDSGLSPNRYSFVFTF 123
K+F + D +NT+I S+C D ++ T R S + P+ +F+ T
Sbjct: 464 KIFSSMGTGDTVTWNTVI-------SACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTL 516
Query: 124 GACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLY 183
C + + + G+++ ++ G +S + + NALI MY K G +E +VFE +D+
Sbjct: 517 PMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVV 576
Query: 184 SWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYV----QVGCFMEALDFFHRM 239
+W MI AY G +A E F +M++ +V S + + G E L F +M
Sbjct: 577 TWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKM 636
Query: 240 ---LQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKC 296
++ P Y V L + S ++ + FI IK + + AS++
Sbjct: 637 KTHYKIDPMIEHYACVVDLLSRSQKISKAE-----EFIQAMPIKPDASIWASVLRACRTS 691
Query: 297 GEIESASRV 305
G++E+A RV
Sbjct: 692 GDMETAERV 700
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 338 bits (867), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 187/570 (32%), Positives = 303/570 (53%), Gaps = 14/570 (2%)
Query: 55 FLKLVADASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSP 114
F L+ D + A KL+D +P D+ MI +++ ++F +
Sbjct: 148 FGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLC-REGRVDEARLIFDEM-------- 198
Query: 115 NRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVF 174
R V T+ G V +V + +++ Y G +E + F
Sbjct: 199 -RERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFF 257
Query: 175 EWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALD 234
E K + + N MI + G +S+A+ +FD M+++D +W +I Y + G +EALD
Sbjct: 258 EVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALD 317
Query: 235 FFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYA 294
F +M + G +P+ + +S L+ C+ L +L G+ +H+ + R + + + + ++ MY
Sbjct: 318 LFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYV 377
Query: 295 KCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFV 354
KCGE+ A VF + + + + WN++I G+A HG EA+K+F +M PNKVT +
Sbjct: 378 KCGELVKAKLVF-DRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLI 436
Query: 355 ALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPM 414
A+L ACS+ +EEG F M S + + P +EHY C VD+L RAG + +A ++I SM +
Sbjct: 437 AILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTI 496
Query: 415 APDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARML 474
PD +WGA+L AC+ + ++ + + E +P++ G +VLL +I +S +W D ++
Sbjct: 497 KPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVV 556
Query: 475 REKSEISTATKKIPGCSSIELNGTFYQFLVGD-RSHPQSRELYSFLDEMTTKLKIAGYVP 533
R+ + + K PGCS IE+ + F G ++HP+ + L++ L+ AGY P
Sbjct: 557 RKNMRTNNVS-KFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSP 615
Query: 534 VFGXXXXXXXXXXXXXTALSVHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFI 593
+LS HSE+LA+A+GLL G PIR++KNLRVC DCH K I
Sbjct: 616 DCS-HVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLI 674
Query: 594 SKVYDRVIIVRDRTRYHHFKDGICSCKDYW 623
SKV +R II+RD R+HHF +G CSC+DYW
Sbjct: 675 SKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 124/270 (45%), Gaps = 34/270 (12%)
Query: 158 IGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWS 217
I + G + RK F+ K + SWN++++ Y +G +A++LFDEM E++VVSW+
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWN 83
Query: 218 TIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRG 277
+++GY++ +EA + F M P+ N ++ A+ +G +G
Sbjct: 84 GLVSGYIKNRMIVEARNVFELM----PERNVVSW----------TAMVKGYMQEGMVGEA 129
Query: 278 EI---KMNERLLASIIDMYAKC---GEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKP 331
E +M ER S M+ G I+ A +++ K V N MIGG G+
Sbjct: 130 ESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTN-MIGGLCREGRV 188
Query: 332 SEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGC 391
EA +F +M+ NV VT+ ++ V+ + F +M PE
Sbjct: 189 DEARLIFDEMRERNV----VTWTTMITGYRQNNRVDVARKLFEVM-------PEKTEVSW 237
Query: 392 MVDLL--SRAGLLKEAEDMISSMPMAPDVA 419
LL + +G +++AE+ MPM P +A
Sbjct: 238 TSMLLGYTLSGRIEDAEEFFEVMPMKPVIA 267
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/315 (20%), Positives = 145/315 (46%), Gaps = 42/315 (13%)
Query: 155 NALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVV 214
N+++ Y GL + R++F+ ++++ SWN +++ Y+ + + +A+ +F+ M E++VV
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVV 111
Query: 215 SWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFI 274
SW+ ++ GY+Q G EA F RM P+ NE ++ + +D+ + ++ +
Sbjct: 112 SWTAMVKGYMQEGMVGEAESLFWRM----PERNEVSWTVMFGGLIDDGRIDKARKLYDMM 167
Query: 275 GRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEA 334
++ + ++ + + G ++ A R+ ++ +R V W MI G+ + + A
Sbjct: 168 PVKDVVASTNMIGGL----CREGRVDEA-RLIFDEMRERNVVTWTTMITGYRQNNRVDVA 222
Query: 335 IKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRL-----------MVSDYGII 383
K+F+ M +V++ ++L + +E+ + +F + M+ +G +
Sbjct: 223 RKLFEVMP----EKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEV 278
Query: 384 PEIEHYGCMVDLL---------------SRAGLLKEAEDMISSMP---MAPDVAIWGAVL 425
EI + DL+ R G EA D+ + M + P ++L
Sbjct: 279 GEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISIL 338
Query: 426 NACRIYKDMERGYRI 440
+ C ++ G ++
Sbjct: 339 SVCATLASLQYGRQV 353
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 143/358 (39%), Gaps = 75/358 (20%)
Query: 148 DSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKEL--- 204
+ NV A++ Y + G+V +F +++ SW M + G + +A++L
Sbjct: 107 ERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDM 166
Query: 205 ----------------------------FDEMQEQDVVSWSTIIAGYVQVGCFMEALDFF 236
FDEM+E++VV+W+T+I GY Q +D
Sbjct: 167 MPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQ----NNRVDVA 222
Query: 237 HRMLQVGPKPNEYTFVSALAACSNLVAL-DQGKWIHSFIGRGEIKMNERLLASIIDMYAK 295
++ +V P+ E ++ S L + + D ++ + I N ++I + +
Sbjct: 223 RKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACN-----AMIVGFGE 277
Query: 296 CGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVA 355
GEI A RVF + R W MI + G EA+ +F +M+ + V P+ + ++
Sbjct: 278 VGEISKARRVF-DLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLIS 336
Query: 356 LLNACS-----------HGYM-------------------VEEGKLYFRLMVSDYGIIPE 385
+L+ C+ H ++ V+ G+L +V D +
Sbjct: 337 ILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKD 396
Query: 386 IEHYGCMVDLLSRAGLLKEAEDMISSMPMA---PDVAIWGAVLNACRIYKDMERGYRI 440
I + ++ + GL +EA + MP + P+ A+L AC +E G I
Sbjct: 397 IIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEI 454
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 336 bits (861), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 178/504 (35%), Positives = 299/504 (59%), Gaps = 11/504 (2%)
Query: 23 LVDT-CKSIQQIKQTHAQLVTTALISHHVSANKFLKL--VADASLSYAHKLFDQIPQPDL 79
L+DT C +++++KQ HA L+ T LIS V+A++ L + + ++YA+ +F +I +
Sbjct: 30 LIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNP 89
Query: 80 FIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVR 139
F++NT+I+ S S + +L + P R ++ F A G ++G Q+
Sbjct: 90 FVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLH 149
Query: 140 SHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMS 199
+K GL+ + F+ N ++ MY G + ++F + D+ +WN+MI + G +
Sbjct: 150 GMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLID 209
Query: 200 QAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACS 259
QA+ LFDEM +++ VSW+++I+G+V+ G F +ALD F M + KP+ +T VS L AC+
Sbjct: 210 QAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACA 269
Query: 260 NLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWN 319
L A +QG+WIH +I R ++N ++ ++IDMY KCG IE VF E K+++ WN
Sbjct: 270 YLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVF-ECAPKKQLSCWN 328
Query: 320 AMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSD 379
+MI G A +G A+ +F +++ + P+ V+F+ +L AC+H V +FRLM
Sbjct: 329 SMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEK 388
Query: 380 YGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYR 439
Y I P I+HY MV++L AGLL+EAE +I +MP+ D IW ++L+ACR ++E R
Sbjct: 389 YMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKR 448
Query: 440 IGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDA---RMLREKSEISTATKKIPGCSSIELN 496
+ +K++DP+ +VLL N Y+S G + +A R+L ++ ++ +K GCSSIE++
Sbjct: 449 AAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQM----EKEVGCSSIEVD 504
Query: 497 GTFYQFLVGDRSHPQSRELYSFLD 520
++F+ +HP+S E+YS LD
Sbjct: 505 FEVHEFISCGGTHPKSAEIYSLLD 528
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 335 bits (860), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 177/488 (36%), Positives = 283/488 (57%), Gaps = 15/488 (3%)
Query: 37 HAQLVTTALISHHVSANKFLKLVADASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSC 96
H + L+SH +A+ + + + A K+FD+ P DL +N +I +
Sbjct: 181 HVLKLRLELVSHVHNASIHM-FASCGDMENARKVFDESPVRDLVSWNCLINGYK-KIGEA 238
Query: 97 NDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNA 156
++ V++L+ + G+ P+ + + +C + G++ + + GL + +VNA
Sbjct: 239 EKAIYVYKLMESE-GVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNA 297
Query: 157 LIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSW 216
L+ M+ K G + R++F+ + + SW TMI+ Y G + +++LFD+M+E+DVV W
Sbjct: 298 LMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLW 357
Query: 217 STIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGR 276
+ +I G VQ +AL F M KP+E T + L+ACS L ALD G WIH +I +
Sbjct: 358 NAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEK 417
Query: 277 GEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAK-RKVWPWNAMIGGFAMHGKPSEAI 335
+ +N L S++DMYAKCG I A VF H + R + A+IGG A+HG S AI
Sbjct: 418 YSLSLNVALGTSLVDMYAKCGNISEALSVF--HGIQTRNSLTYTAIIGGLALHGDASTAI 475
Query: 336 KVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDL 395
F +M ++P+++TF+ LL+AC HG M++ G+ YF M S + + P+++HY MVDL
Sbjct: 476 SYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDL 535
Query: 396 LSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCH 455
L RAGLL+EA+ ++ SMPM D A+WGA+L CR++ ++E G + + + E+DP+ G +
Sbjct: 536 LGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIY 595
Query: 456 VLLGNIYSSSGRWNDA----RMLREKSEISTATKKIPGCSSIELNGTFYQFLVGDRSHPQ 511
VLL +Y + W DA RM+ E+ +KIPGCSSIE+NG +F+V D+S P+
Sbjct: 596 VLLDGMYGEANMWEDAKRARRMMNER-----GVEKIPGCSSIEVNGIVCEFIVRDKSRPE 650
Query: 512 SRELYSFL 519
S ++Y L
Sbjct: 651 SEKIYDRL 658
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 193/421 (45%), Gaps = 68/421 (16%)
Query: 20 LASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVADAS---LSYAHKLFDQIPQ 76
L SL++ CK + +KQ AQ++ LI ++++ + A + L Y+ K+ I
Sbjct: 56 LLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIEN 115
Query: 77 PDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLS--PNRYSFVFTFGACGNGLSVQE 134
P++F +N I+ S S + +S ++++ + R P+ +++ F C +
Sbjct: 116 PNIFSWNVTIRGFSESENP-KESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSL 174
Query: 135 GEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVG 194
G + H +K+ L+ V NA I M+ G +E RKVF+ + +DL SWN +
Sbjct: 175 GHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCL------ 228
Query: 195 SGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSA 254
I GY ++G +A+ + M G KP++ T +
Sbjct: 229 -------------------------INGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGL 263
Query: 255 LAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVF-------- 306
+++CS L L++GK + ++ ++M L+ +++DM++KCG+I A R+F
Sbjct: 264 VSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTI 323
Query: 307 ----------------------WEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVE 344
++ ++ V WNAMIGG + +A+ +FQ+M+
Sbjct: 324 VSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTS 383
Query: 345 NVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKE 404
N P+++T + L+ACS ++ G ++ + Y + + +VD+ ++ G + E
Sbjct: 384 NTKPDEITMIHCLSACSQLGALDVG-IWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISE 442
Query: 405 A 405
A
Sbjct: 443 A 443
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 333 bits (855), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 177/589 (30%), Positives = 312/589 (52%), Gaps = 38/589 (6%)
Query: 37 HAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSS 95
H +V + L + + N + + +S + ++ Q+P+ D+ +N +I ++
Sbjct: 385 HGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYA-EDED 443
Query: 96 CNDSLMVFRLLTRDSGLSPNRYSFVFTFGACG-NGLSVQEGEQVRSHAVKVGLDSNVFVV 154
+ +L F+ + R G+S N + V AC G ++ G+ + ++ V G +S+ V
Sbjct: 444 PDKALAAFQTM-RVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVK 502
Query: 155 NALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVV 214
N+LI M Y G++S +++LF+ + ++++
Sbjct: 503 NSLITM-------------------------------YAKCGDLSSSQDLFNGLDNRNII 531
Query: 215 SWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFI 274
+W+ ++A G E L +M G ++++F L+A + L L++G+ +H
Sbjct: 532 TWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLA 591
Query: 275 GRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEA 334
+ + + + + DMY+KCGEI ++ + R + WN +I HG E
Sbjct: 592 VKLGFEHDSFIFNAAADMYSKCGEIGEVVKML-PPSVNRSLPSWNILISALGRHGYFEEV 650
Query: 335 IKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVD 394
F +M + P VTFV+LL ACSHG +V++G Y+ ++ D+G+ P IEH C++D
Sbjct: 651 CATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVID 710
Query: 395 LLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGC 454
LL R+G L EAE IS MPM P+ +W ++L +C+I+ +++RG + + +++P
Sbjct: 711 LLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSV 770
Query: 455 HVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSRE 514
+VL N+++++GRW D +R++ KK CS ++L F +GDR+HPQ+ E
Sbjct: 771 YVLSSNMFATTGRWEDVENVRKQMGFKNIKKK-QACSWVKLKDKVSSFGIGDRTHPQTME 829
Query: 515 LYSFLDEMTTKLKIAGYVPVFGXXXXXXXXXXXXXTALSVHSEKLAIAFGLLNTAPGTPI 574
+Y+ L+++ +K +GYV L HSE+LA+A+ L++T G+ +
Sbjct: 830 IYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHN-LWNHSERLALAYALMSTPEGSTV 888
Query: 575 RIVKNLRVCRDCHQVTKFISKVYDRVIIVRDRTRYHHFKDGICSCKDYW 623
RI KNLR+C DCH V KF+S+V R I++RD+ R+HHF+ G+CSCKDYW
Sbjct: 889 RIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 186/396 (46%), Gaps = 38/396 (9%)
Query: 34 KQTHAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIPQPDLFIYNTMIKAHSLS 92
+Q Q+V + L S N + ++ ++ YA+ +FDQ+ + D +N++ A++
Sbjct: 180 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYA-Q 238
Query: 93 PSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVF 152
+S +F L+ R N + G+ + G + VK+G DS V
Sbjct: 239 NGHIEESFRIFSLMRRFHD-EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVC 297
Query: 153 VVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQD 212
V N L+ M Y G+G +A +F +M +D
Sbjct: 298 VCNTLLRM-------------------------------YAGAGRSVEANLVFKQMPTKD 326
Query: 213 VVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHS 272
++SW++++A +V G ++AL M+ G N TF SALAAC ++G+ +H
Sbjct: 327 LISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHG 386
Query: 273 FIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPS 332
+ + N+ + +++ MY K GE+ + RV + +R V WNA+IGG+A P
Sbjct: 387 LVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQM-PRRDVVAWNALIGGYAEDEDPD 445
Query: 333 EAIKVFQKMKVENVSPNKVTFVALLNAC-SHGYMVEEGKLYFRLMVSDYGIIPEIEHYGC 391
+A+ FQ M+VE VS N +T V++L+AC G ++E GK +VS G +
Sbjct: 446 KALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVS-AGFESDEHVKNS 504
Query: 392 MVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNA 427
++ + ++ G L ++D+ + + ++ W A+L A
Sbjct: 505 LITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAA 539
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 181/415 (43%), Gaps = 53/415 (12%)
Query: 7 TLTKPFHSD-HCCRLASLVDTCKSIQQIK---QTHAQLVTTALISHHVSANKFLKLVADA 62
+L + FH + + +++L+ + K H +V S N L++ A A
Sbjct: 250 SLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGA 309
Query: 63 SLSY-AHKLFDQIPQPDLFIYNTMIKAHSLSPSSCND--SLMVFRLLTR--DSGLSPNRY 117
S A+ +F Q+P DL +N SL S ND SL LL SG S N
Sbjct: 310 GRSVEANLVFKQMPTKDLISWN------SLMASFVNDGRSLDALGLLCSMISSGKSVNYV 363
Query: 118 SFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWA 177
+F AC ++G + V GL N + NAL+ MYGK G + R+V
Sbjct: 364 TFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQM 423
Query: 178 VDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFH 237
+D+ +WN +I Y E ++ D +AL F
Sbjct: 424 PRRDVVAWNALIGGYA-------------EDEDPD------------------KALAAFQ 452
Query: 238 RMLQVGPKPNEYTFVSALAAC---SNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYA 294
M G N T VS L+AC +L L++GK +H++I + +E + S+I MYA
Sbjct: 453 TMRVEGVSSNYITVVSVLSACLLPGDL--LERGKPLHAYIVSAGFESDEHVKNSLITMYA 510
Query: 295 KCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFV 354
KCG++ S+ +F + R + WNAM+ A HG E +K+ KM+ VS ++ +F
Sbjct: 511 KCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFS 569
Query: 355 ALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMI 409
L+A + ++EEG+ L V G + + D+ S+ G + E M+
Sbjct: 570 EGLSAAAKLAVLEEGQQLHGLAVK-LGFEHDSFIFNAAADMYSKCGEIGEVVKML 623
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 176/413 (42%), Gaps = 41/413 (9%)
Query: 20 LASLVDTC----KSIQQIKQTHAQLVTTALISHHVSANKFLKLVADASL-SYAHKLFDQI 74
+ASLV C ++ Q H + + L+S + L L L S + K+F+++
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 75 PQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQE 134
P ++ + +++ +S + + +++ + R G+ N S +CG
Sbjct: 121 PDRNVVSWTSLMVGYS-DKGEPEEVIDIYKGM-RGEGVGCNENSMSLVISSCGLLKDESL 178
Query: 135 GEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVG 194
G Q+ VK GL+S + V N+LI M G G V+Y +F+ ++D SWN++ AAY
Sbjct: 179 GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQ 238
Query: 195 SGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSA 254
+G++ ++ +F M+ FH + N T +
Sbjct: 239 NGHIEESFRIFSLMRR-------------------------FH------DEVNSTTVSTL 267
Query: 255 LAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRK 314
L+ ++ G+ IH + + + +++ MYA G A+ VF + K
Sbjct: 268 LSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDL 327
Query: 315 VWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFR 374
+ WN+++ F G+ +A+ + M S N VTF + L AC E+G++
Sbjct: 328 I-SWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHG 386
Query: 375 LMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNA 427
L+V G+ +V + + G + E+ ++ MP DV W A++
Sbjct: 387 LVVVS-GLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALIGG 437
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 130/257 (50%), Gaps = 8/257 (3%)
Query: 192 YVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTF 251
Y G + A+ LFD M ++ VSW+T+++G V+VG ++E ++FF +M +G KP+ +
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 252 VSALAACSNLVAL-DQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHN 310
S + AC ++ +G +H F+ + + + + +I+ +Y G + + +VF E
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVF-EEM 120
Query: 311 AKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEE-- 368
R V W +++ G++ G+P E I +++ M+ E V N+ + ++++C G + +E
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC--GLLKDESL 178
Query: 369 GKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNAC 428
G+ +V G+ ++ ++ +L G + A + M D W ++ A
Sbjct: 179 GRQIIGQVVKS-GLESKLAVENSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIAAAY 236
Query: 429 RIYKDMERGYRIGRIIK 445
+E +RI +++
Sbjct: 237 AQNGHIEESFRIFSLMR 253
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 157/360 (43%), Gaps = 37/360 (10%)
Query: 67 AHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGAC 126
A LFD +P + +NTM+ + + + FR + D G+ P+ + AC
Sbjct: 11 ARHLFDIMPVRNEVSWNTMMSG-IVRVGLYLEGMEFFRKMC-DLGIKPSSFVIASLVTAC 68
Query: 127 G-NGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSW 185
G +G +EG QV K GL S+V+V A++ +YG +GLV RKVF
Sbjct: 69 GRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVF----------- 117
Query: 186 NTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPK 245
+EM +++VVSW++++ GY G E +D + M G
Sbjct: 118 --------------------EEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVG 157
Query: 246 PNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRV 305
NE + +++C L G+ I + + ++ + S+I M G ++ A+ +
Sbjct: 158 CNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYI 217
Query: 306 FWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYM 365
F + ++R WN++ +A +G E+ ++F M+ + N T LL+ H
Sbjct: 218 F-DQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDH 276
Query: 366 VEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVL 425
+ G+ L+V G + ++ + + AG EA + MP D+ W +++
Sbjct: 277 QKWGRGIHGLVVK-MGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP-TKDLISWNSLM 334
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 133/315 (42%), Gaps = 37/315 (11%)
Query: 30 IQQIKQTHAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIPQPDLFIYNTMIKA 88
+++ K HA +V+ S N + + A LS + LF+ + ++ +N M+ A
Sbjct: 480 LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAA 539
Query: 89 HSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLD 148
++ +V ++ R G+S +++SF A ++EG+Q+ AVK+G +
Sbjct: 540 NAHHGHGEEVLKLVSKM--RSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFE 597
Query: 149 SNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEM 208
+ F+ NA MY K G + K+ +V++ L SWN +I+A
Sbjct: 598 HDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISA----------------- 640
Query: 209 QEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGK 268
+ G F E FH ML++G KP TFVS L ACS+ +D+G
Sbjct: 641 --------------LGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGL 686
Query: 269 WIHSFIGR--GEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFA 326
+ I R G E + +ID+ + G + A + K W +++
Sbjct: 687 AYYDMIARDFGLEPAIEHCIC-VIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCK 745
Query: 327 MHGKPSEAIKVFQKM 341
+HG K + +
Sbjct: 746 IHGNLDRGRKAAENL 760
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 333 bits (853), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 193/559 (34%), Positives = 298/559 (53%), Gaps = 38/559 (6%)
Query: 67 AHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGAC 126
A KLFD+IP+ +L +N I ++S++ +++ F R G PN +F AC
Sbjct: 162 ARKLFDEIPERNLETWNAFI-SNSVTDGRPREAIEAFIEFRRIDG-HPNSITFCAFLNAC 219
Query: 127 GNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWN 186
+ L + G Q+ ++ G D++V V N LI YGK
Sbjct: 220 SDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGK----------------------- 256
Query: 187 TMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKP 246
+ ++ +F EM ++ VSW +++A YVQ +A + R + +
Sbjct: 257 --------CKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVET 308
Query: 247 NEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVF 306
+++ S L+AC+ + L+ G+ IH+ + ++ + ++++DMY KCG IE + + F
Sbjct: 309 SDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAF 368
Query: 307 WEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENV--SPNKVTFVALLNACSHGY 364
E K V N++IGG+A G+ A+ +F++M +PN +TFV+LL+ACS
Sbjct: 369 DEMPEKNLV-TRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAG 427
Query: 365 MVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAV 424
VE G F M S YGI P EHY C+VD+L RAG+++ A + I MP+ P +++WGA+
Sbjct: 428 AVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGAL 487
Query: 425 LNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTAT 484
NACR++ + G + ++DP G HVLL N ++++GRW +A +RE+ +
Sbjct: 488 QNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELK-GVGI 546
Query: 485 KKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVFGXXXXXXXX 544
KK G S I + + F DRSH ++E+ + L ++ +++ AGY P
Sbjct: 547 KKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDL-KLSLYDLE 605
Query: 545 XXXXXTALSVHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRVIIVR 604
+S HSEKLA+AFGLL+ PIRI KNLR+C DCH KF+S R IIVR
Sbjct: 606 EEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVR 665
Query: 605 DRTRYHHFKDGICSCKDYW 623
D R+H FKDGICSCKDYW
Sbjct: 666 DNNRFHRFKDGICSCKDYW 684
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 135/310 (43%), Gaps = 41/310 (13%)
Query: 108 RDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLV 167
R G+ PN ++F F A + G+Q+ + AVK G +VFV + MY K L
Sbjct: 100 RREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLR 159
Query: 168 EYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVG 227
+ RK+F+ +++L +WN I+ V G +A E F E + D G+
Sbjct: 160 DDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRID---------GH---- 206
Query: 228 CFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLA 287
PN TF + L ACS+ + L+ G +H + R + +
Sbjct: 207 ------------------PNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCN 248
Query: 288 SIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVS 347
+ID Y KC +I S+ +F E K V W +++ + + + +A ++ + + + V
Sbjct: 249 GLIDFYGKCKQIRSSEIIFTEMGTKNAV-SWCSLVAAYVQNHEDEKASVLYLRSRKDIVE 307
Query: 348 PNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHY----GCMVDLLSRAGLLK 403
+ ++L+AC+ +E G+ + + + +E +VD+ + G ++
Sbjct: 308 TSDFMISSVLSACAGMAGLELGR-----SIHAHAVKACVERTIFVGSALVDMYGKCGCIE 362
Query: 404 EAEDMISSMP 413
++E MP
Sbjct: 363 DSEQAFDEMP 372
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 119/262 (45%), Gaps = 2/262 (0%)
Query: 151 VFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQE 210
+ + NA+ + G V + R V + N +I Y + A+ +
Sbjct: 11 LLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPA 70
Query: 211 QDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWI 270
++VVSW+++I+G Q G F AL F M + G PN++TF A A ++L GK I
Sbjct: 71 RNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQI 130
Query: 271 HSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGK 330
H+ + ++ + S DMY K + +R ++ +R + WNA I G+
Sbjct: 131 HALAVKCGRILDVFVGCSAFDMYCKT-RLRDDARKLFDEIPERNLETWNAFISNSVTDGR 189
Query: 331 PSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYG 390
P EAI+ F + + + PN +TF A LNACS + G + +V G ++
Sbjct: 190 PREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLG-MQLHGLVLRSGFDTDVSVCN 248
Query: 391 CMVDLLSRAGLLKEAEDMISSM 412
++D + ++ +E + + M
Sbjct: 249 GLIDFYGKCKQIRSSEIIFTEM 270
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 330 bits (846), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 173/501 (34%), Positives = 292/501 (58%), Gaps = 5/501 (0%)
Query: 34 KQTHAQLVTTALISHHVSANKFLKLVADASL-SYAHKLFDQIPQPDLFIYNTMIKAHSLS 92
K+ H +V L S+ N +K+ + L A +FD+ + D+F +N MI ++
Sbjct: 155 KKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYN-R 213
Query: 93 PSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVF 152
+S+ + + R+ +SP + + AC ++V + + + ++
Sbjct: 214 MKEYEESIELLVEMERNL-VSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLR 272
Query: 153 VVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQD 212
+ NAL+ Y G ++ ++F +D+ SW +++ YV GN+ A+ FD+M +D
Sbjct: 273 LENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRD 332
Query: 213 VVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHS 272
+SW+ +I GY++ GCF E+L+ F M G P+E+T VS L AC++L +L+ G+WI +
Sbjct: 333 RISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKT 392
Query: 273 FIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPS 332
+I + +IK + + ++IDMY KCG E A +VF + + + K + W AM+ G A +G+
Sbjct: 393 YIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDK-FTWTAMVVGLANNGQGQ 451
Query: 333 EAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCM 392
EAIKVF +M+ ++ P+ +T++ +L+AC+H MV++ + +F M SD+ I P + HYGCM
Sbjct: 452 EAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCM 511
Query: 393 VDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHV 452
VD+L RAGL+KEA +++ MPM P+ +WGA+L A R++ D + I E++P++
Sbjct: 512 VDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNG 571
Query: 453 GCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNGTFYQFLVGDRSHPQS 512
+ LL NIY+ RW D R +R K + A KK PG S IE+NG ++F+ GD+SH QS
Sbjct: 572 AVYALLCNIYAGCKRWKDLREVRRKI-VDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQS 630
Query: 513 RELYSFLDEMTTKLKIAGYVP 533
E+Y L+E+ + A Y+P
Sbjct: 631 EEIYMKLEELAQESTFAAYLP 651
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 330 bits (846), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 205/613 (33%), Positives = 323/613 (52%), Gaps = 57/613 (9%)
Query: 20 LASLVDTCKSI---QQIKQTHAQLVTTALISHHVSANKFLKLVADA-SLSYAHKLFDQIP 75
L S++ C+ + + + HA ++TT N ++ +A S A KLF ++
Sbjct: 300 LTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRME 359
Query: 76 QPDLFIYNTMIKAHSLS--PSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQ 133
+ D+ + TMI + + P D+ +R++ +DS + P+ + AC +
Sbjct: 360 RKDIVSWTTMISGYEYNFLPDKAIDT---YRMMDQDS-VKPDEITVAAVLSACATLGDLD 415
Query: 134 EGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYV 193
G ++ A+K L S V V N LI MY K ++
Sbjct: 416 TGVELHKLAIKARLISYVIVANNLINMYSKCKCID------------------------- 450
Query: 194 GSGNMSQAKELFDEMQEQDVVSWSTIIAGY-VQVGCFMEALDFFHRMLQVGPKPNEYTFV 252
+A ++F + ++V+SW++IIAG + CF EAL F R +++ +PN T
Sbjct: 451 ------KALDIFHNIPRKNVISWTSIIAGLRLNNRCF-EALIFL-RQMKMTLQPNAITLT 502
Query: 253 SALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAK 312
+ALAAC+ + AL GK IH+ + R + +++ L +++DMY +CG + +A F ++ K
Sbjct: 503 AALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQF--NSQK 560
Query: 313 RKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLY 372
+ V WN ++ G++ G+ S +++F +M V P+++TF++LL CS MV +G +Y
Sbjct: 561 KDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMY 620
Query: 373 FRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYK 432
F M DYG+ P ++HY C+VDLL RAG L+EA I MP+ PD A+WGA+LNACRI+
Sbjct: 621 FSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHH 679
Query: 433 DMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDA----RMLREKSEISTATKKIP 488
++ G + I E+D VG ++LL N+Y+ G+W + RM++E A
Sbjct: 680 KIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDA----- 734
Query: 489 GCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVFGXXXXXXXXXXXX 548
GCS +E+ G + FL D+ HPQ++E+ + L+ K+ G +
Sbjct: 735 GCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKI-SESSSMDETEISR 793
Query: 549 XTALSVHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRVIIVRDRTR 608
HSE+ AIAFGL+NT PG PI + KNL +C +CH KFISK R I VRD
Sbjct: 794 DEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEH 853
Query: 609 YHHFKDGICSCKD 621
+HHFKDG CSC D
Sbjct: 854 FHHFKDGECSCGD 866
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 161/310 (51%), Gaps = 11/310 (3%)
Query: 124 GACGNGLSVQEGEQVRS-HAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDK-- 180
G C NG + + + S ++V +D +VFV AL+ + E G KV+ A+
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFV--ALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 181 --DLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHR 238
+ N +A +V GN+ A +F +M E+++ SW+ ++ GY + G F EA+ +HR
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 239 MLQVGP-KPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCG 297
ML VG KP+ YTF L C + L +GK +H + R +++ ++ ++I MY KCG
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 298 EIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALL 357
+++SA R+ ++ +R + WNAMI G+ +G E +++F M+ +V P+ +T +++
Sbjct: 246 DVKSA-RLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVI 304
Query: 358 NACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPD 417
+AC G+ +++ G +I + + AG +EAE + S M D
Sbjct: 305 SACELLGDRRLGRDIHAYVITT-GFAVDISVCNSLTQMYLNAGSWREAEKLFSRME-RKD 362
Query: 418 VAIWGAVLNA 427
+ W +++
Sbjct: 363 IVSWTTMISG 372
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 178/384 (46%), Gaps = 44/384 (11%)
Query: 52 ANKFLKL-VADASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDS 110
N FL + V +L A +F ++ + +LF +N ++ ++ ++++ ++ +
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYA-KQGYFDEAMCLYHRMLWVG 190
Query: 111 GLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYG 170
G+ P+ Y+F CG + G++V H V+ G + ++ VVNALI MY
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMY--------- 241
Query: 171 RKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFM 230
V G++ A+ LFD M +D++SW+ +I+GY + G
Sbjct: 242 ----------------------VKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCH 279
Query: 231 EALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASII 290
E L+ F M + P+ T S ++AC L G+ IH+++ ++ + S+
Sbjct: 280 EGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLT 339
Query: 291 DMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNK 350
MY G A ++F ++ + W MI G+ + P +AI ++ M ++V P++
Sbjct: 340 QMYLNAGSWREAEKLF-SRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDE 398
Query: 351 VTFVALLNACSH----GYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAE 406
+T A+L+AC+ VE KL + + Y I+ ++++ S+ + +A
Sbjct: 399 ITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVAN-----NLINMYSKCKCIDKAL 453
Query: 407 DMISSMPMAPDVAIWGAVLNACRI 430
D+ ++P +V W +++ R+
Sbjct: 454 DIFHNIP-RKNVISWTSIIAGLRL 476
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 329 bits (843), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 175/513 (34%), Positives = 291/513 (56%), Gaps = 10/513 (1%)
Query: 20 LASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKL--VADASLSYAHKLFDQIPQP 77
+++++ + + +KQ + ++ + L H K L+ + +LSYA +FD+ P
Sbjct: 27 ISAVISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFP 86
Query: 78 DLFIYNTMIKAHSLS-PSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGE 136
+ +Y ++ A+S S P + + FRL+ S PN + + + S
Sbjct: 87 NTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTP 146
Query: 137 QVRSHAVKVGLDSNVFVVNALIGMYGK-WGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGS 195
V +H K G V V AL+ Y + R++F+ ++++ SW M++ Y S
Sbjct: 147 LVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARS 206
Query: 196 GNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRML-QVGPKPNEYTFVSA 254
G++S A LF++M E+DV SW+ I+A Q G F+EA+ F RM+ + +PNE T V
Sbjct: 207 GDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCV 266
Query: 255 LAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRK 314
L+AC+ L K IH+F R ++ + + S++D+Y KCG +E AS VF + +K+
Sbjct: 267 LSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVF-KMASKKS 325
Query: 315 VWPWNAMIGGFAMHGKPSEAIKVFQ---KMKVENVSPNKVTFVALLNACSHGYMVEEGKL 371
+ WN+MI FA+HG+ EAI VF+ K+ + ++ P+ +TF+ LLNAC+HG +V +G+
Sbjct: 326 LTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRG 385
Query: 372 YFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIY 431
YF LM + +GI P IEHYGC++DLL RAG EA +++S+M M D AIWG++LNAC+I+
Sbjct: 386 YFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIH 445
Query: 432 KDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCS 491
++ + + ++PN+ G ++ N+Y G W +AR R+ + A K PG S
Sbjct: 446 GHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKP-PGWS 504
Query: 492 SIELNGTFYQFLVGDRSHPQSRELYSFLDEMTT 524
IE++ +QF D+SHP++ E+Y LD + +
Sbjct: 505 RIEIDNEVHQFYSLDKSHPETEEIYMILDSLIS 537
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 327 bits (838), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 193/595 (32%), Positives = 297/595 (49%), Gaps = 37/595 (6%)
Query: 30 IQQIKQTHAQLVTTALISHHVSANKFLKLVADASLS-YAHKLFDQIPQPDLFIYNTMIKA 88
I++ KQ H + LISH N + + + S + A ++ D +P DL ++++ +
Sbjct: 152 IEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSG 211
Query: 89 HSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLD 148
+ L + + L V R T + N +++ + N + QV S V+ G +
Sbjct: 212 Y-LECGAFKEGLDVLRK-TANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFN 269
Query: 149 SNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEM 208
+ V ALI MYGK G V Y ++VF D+
Sbjct: 270 AEVEACGALINMYGKCGKVLYAQRVF-------------------------------DDT 298
Query: 209 QEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGK 268
Q++ +TI+ Y Q F EAL+ F +M PNEYTF L + + L L QG
Sbjct: 299 HAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGD 358
Query: 269 WIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMH 328
+H + + + + + ++++MYAK G IE A + F R + WN MI G + H
Sbjct: 359 LLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAF-SGMTFRDIVTWNTMISGCSHH 417
Query: 329 GKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEH 388
G EA++ F +M PN++TF+ +L ACSH VE+G YF ++ + + P+I+H
Sbjct: 418 GLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQH 477
Query: 389 YGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMD 448
Y C+V LLS+AG+ K+AED + + P+ DV W +LNAC + ++ G ++ E
Sbjct: 478 YTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKY 537
Query: 449 PNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNGTFYQFLVGDRS 508
PN G +VLL NI++ S W +R + KK PG S I + + FL D
Sbjct: 538 PNDSGVYVLLSNIHAKSREWEGVAKVRSLMN-NRGVKKEPGVSWIGIRNQTHVFLAEDNQ 596
Query: 509 HPQSRELYSFLDEMTTKLKIAGYVPVFGXXXXXXXXXXXXXTALSVHSEKLAIAFGLLNT 568
HP+ +Y+ + E+ +K+K GY P LS HSEKLA+A+GL+ T
Sbjct: 597 HPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDEEQREDN-LSYHSEKLAVAYGLIKT 655
Query: 569 APGTPIRIVKNLRVCRDCHQVTKFISKVYDRVIIVRDRTRYHHFKDGICSCKDYW 623
+P+ + KN+R+C DCH K ISK+ R I++RD R+HHF DG CSC DYW
Sbjct: 656 PEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 105/425 (24%), Positives = 189/425 (44%), Gaps = 45/425 (10%)
Query: 11 PFHSDHCCRLASLVDTCKSIQQIK---QTHAQLVTTALISHHVSA---NKFLKLVADASL 64
PF D RL L+ C + ++ HA L+ T S A N + L
Sbjct: 28 PFPID---RLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRE 84
Query: 65 SY-AHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTF 123
+ A KLFD +P+ ++ + M+K + S + L +F+ + PN + F
Sbjct: 85 TVRARKLFDLMPERNVVSWCAMMKGYQNSGFDF-EVLKLFKSMFFSGESRPNEFVATVVF 143
Query: 124 GACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLY 183
+C N ++EG+Q +K GL S+ FV N L+ MY
Sbjct: 144 KSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYS--------------------- 182
Query: 184 SWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVG 243
+ SGN +A + D++ D+ +S+ ++GY++ G F E LD +
Sbjct: 183 ---------LCSGN-GEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANED 232
Query: 244 PKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESAS 303
N T++S+L SNL L+ +HS + R ++I+MY KCG++ A
Sbjct: 233 FVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQ 292
Query: 304 RVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHG 363
RVF + +A+ ++ ++ + EA+ +F KM + V PN+ TF LLN+ +
Sbjct: 293 RVFDDTHAQ-NIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAEL 351
Query: 364 YMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGA 423
++++G L L++ G + +V++ +++G +++A S M D+ W
Sbjct: 352 SLLKQGDLLHGLVLKS-GYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFR-DIVTWNT 409
Query: 424 VLNAC 428
+++ C
Sbjct: 410 MISGC 414
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 324 bits (830), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 207/611 (33%), Positives = 303/611 (49%), Gaps = 54/611 (8%)
Query: 27 CKSIQQIKQTHAQLVTTALISHHVSANKFLKLVADASL-SYAHKLFDQIPQ-PDLFIYNT 84
C + IKQ H V+ S+ N F+ + L A +F + + D +N+
Sbjct: 151 CDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNS 210
Query: 85 MIKAHSLSPSSCND----SLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQE----GE 136
MI A+ M+F+ D +FT + N L+ + G
Sbjct: 211 MIVAYGQHKEGAKALALYKEMIFKGFKID----------MFTLASVLNALTSLDHLIGGR 260
Query: 137 QVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSG 196
Q +K G N V + LI Y K G G
Sbjct: 261 QFHGKLIKAGFHQNSHVGSGLIDFYSKCG----------------------------GCD 292
Query: 197 NMSQAKELFDEMQEQDVVSWSTIIAGY-VQVGCFMEALDFFHRMLQVGPKPNEYTFVSAL 255
M ++++F E+ D+V W+T+I+GY + EA+ F +M ++G +P++ +FV
Sbjct: 293 GMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVT 352
Query: 256 AACSNLVALDQGKWIHSFIGRGEIKMNE-RLLASIIDMYAKCGEIESASRVFWEHNAKRK 314
+ACSNL + Q K IH + I N + ++I +Y K G ++ A VF + +
Sbjct: 353 SACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVF-DRMPELN 411
Query: 315 VWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFR 374
+N MI G+A HG +EA+ ++Q+M ++PNK+TFVA+L+AC+H V+EG+ YF
Sbjct: 412 AVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFN 471
Query: 375 LMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDM 434
M + I PE EHY CM+DLL RAG L+EAE I +MP P W A+L ACR +K+M
Sbjct: 472 TMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNM 531
Query: 435 ERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIE 494
R + M P +V+L N+Y+ + +W + +R KS +K PGCS IE
Sbjct: 532 ALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVR-KSMRGKRIRKKPGCSWIE 590
Query: 495 LNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYV--PVFGXXXXXXXXXXXXXTAL 552
+ + F+ D SHP RE+ +L+EM K+K GYV + L
Sbjct: 591 VKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRL 650
Query: 553 SVHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRVIIVRDRTRYHHF 612
HSEKLA+AFGL++T G + +VKNLR+C DCH KF+S V R IIVRD R+H F
Sbjct: 651 GHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCF 710
Query: 613 KDGICSCKDYW 623
KDG CSC DYW
Sbjct: 711 KDGKCSCGDYW 721
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 162/322 (50%), Gaps = 23/322 (7%)
Query: 135 GEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVG 194
G+ + + VK + S+ ++ N + +Y K G + Y R F + +++S+N ++ AY
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAK 86
Query: 195 SGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSA 254
+ A++LFDE+ + D VS++T+I+GY A+ F RM ++G + + +T
Sbjct: 87 DSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGL 146
Query: 255 LAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRK 314
+AAC + V D K +H F G + + + Y+K G + A VF+ + R
Sbjct: 147 IAACCDRV--DLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRD 204
Query: 315 VWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNA-CSHGYMVEEGKLYF 373
WN+MI + H + ++A+ ++++M + + T ++LNA S +++ + +
Sbjct: 205 EVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHG 264
Query: 374 RLMVSDYGIIPEIEHYGC-MVDLLSRAG---LLKEAEDMISSMPMAPDVAIWGAVLN--- 426
+L+ + + + H G ++D S+ G + ++E + + ++PD+ +W +++
Sbjct: 265 KLIKAGF---HQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEI-LSPDLVVWNTMISGYS 320
Query: 427 --------ACRIYKDMER-GYR 439
A + ++ M+R G+R
Sbjct: 321 MNEELSEEAVKSFRQMQRIGHR 342
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 147/318 (46%), Gaps = 41/318 (12%)
Query: 20 LASLVDTCKSIQQI---KQTHAQLVTTALISH-HVSA---NKFLKLVADASLSYAHKLFD 72
LAS+++ S+ + +Q H +L+ + HV + + + K + + K+F
Sbjct: 243 LASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQ 302
Query: 73 QIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSV 132
+I PDL ++NTMI +S++ +++ FR + R G P+ SFV AC N S
Sbjct: 303 EILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQR-IGHRPDDCSFVCVTSACSNLSSP 361
Query: 133 QEGEQVRSHAVKVGLDSN-VFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAA 191
+ +Q+ A+K + SN + V NALI +Y K G ++ R VF+ + + S+N MI
Sbjct: 362 SQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMI-- 419
Query: 192 YVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTF 251
GY Q G EAL + RML G PN+ TF
Sbjct: 420 -----------------------------KGYAQHGHGTEALLLYQRMLDSGIAPNKITF 450
Query: 252 VSALAACSNLVALDQGK-WIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHN 310
V+ L+AC++ +D+G+ + ++ +I+ + +ID+ + G++E A R
Sbjct: 451 VAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMP 510
Query: 311 AKRKVWPWNAMIGGFAMH 328
K W A++G H
Sbjct: 511 YKPGSVAWAALLGACRKH 528
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 173/416 (41%), Gaps = 71/416 (17%)
Query: 34 KQTHAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIPQPDLFIYNTMIKAHSLS 92
K HA V + + S +N F+ L + LSYA F +P++F YN ++KA++
Sbjct: 28 KSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKD 87
Query: 93 P------------------------SSCNDSLMVFRLLT-----RDSGLSPNRYSFVFTF 123
S D+ F + R G + ++
Sbjct: 88 SKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLI 147
Query: 124 GACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVD--KD 181
AC + + + +Q+ +V G DS V NA + Y K GL+ VF + +D +D
Sbjct: 148 AACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVF-YGMDELRD 204
Query: 182 LYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQ 241
SWN+MI AY Q KE +AL + M+
Sbjct: 205 EVSWNSMIVAY------GQHKE-------------------------GAKALALYKEMIF 233
Query: 242 VGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIE- 300
G K + +T S L A ++L L G+ H + + N + + +ID Y+KCG +
Sbjct: 234 KGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDG 293
Query: 301 --SASRVFWEHNAKRKVWPWNAMIGGFAMHGKPS-EAIKVFQKMKVENVSPNKVTFVALL 357
+ +VF E + V WN MI G++M+ + S EA+K F++M+ P+ +FV +
Sbjct: 294 MYDSEKVFQEILSPDLV-VWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVT 352
Query: 358 NACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMP 413
+ACS+ + K L + + I ++ L ++G L++A + MP
Sbjct: 353 SACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMP 408
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 324 bits (830), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 180/498 (36%), Positives = 299/498 (60%), Gaps = 9/498 (1%)
Query: 27 CKSIQQIKQTHAQLVTTALISHHVSANK---FLKLVADASLSYAHKLFDQIPQPDLFIYN 83
CKS+ ++ + H L+T L ++ F L + + YA+K ++ P + +N
Sbjct: 18 CKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWN 77
Query: 84 TMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAV 143
+I+ S S + S+ V+ + R GL P+ ++ F + + + G + V
Sbjct: 78 FVIRGFSNSRNP-EKSISVYIQMLR-FGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVV 135
Query: 144 KVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKE 203
K GL+ ++F+ N LI MYG + RK+F+ K+L +WN+++ AY SG++ A+
Sbjct: 136 KSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARL 195
Query: 204 LFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVG-PKPNEYTFVSALAACSNLV 262
+FDEM E+DVV+WS++I GYV+ G + +AL+ F +M+++G K NE T VS + AC++L
Sbjct: 196 VFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLG 255
Query: 263 ALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKR-KVWPWNAM 321
AL++GK +H +I + + L S+IDMYAKCG I A VF+ + K WNA+
Sbjct: 256 ALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAI 315
Query: 322 IGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYG 381
IGG A HG E++++F KM+ + P+++TF+ LL ACSHG +V+E +F+ + + G
Sbjct: 316 IGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSL-KESG 374
Query: 382 IIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIG 441
P+ EHY CMVD+LSRAGL+K+A D IS MP+ P ++ GA+LN C + ++E +G
Sbjct: 375 AEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVG 434
Query: 442 RIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNGTFYQ 501
+ + E+ P++ G +V L N+Y+ + ++ AR +RE E KKI G S ++L+GT ++
Sbjct: 435 KKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAME-KKGVKKIAGHSILDLDGTRHR 493
Query: 502 FLVGDRSHPQSRELYSFL 519
F+ D++H S ++Y+ L
Sbjct: 494 FIAHDKTHFHSDKIYAVL 511
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 323 bits (827), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 199/621 (32%), Positives = 324/621 (52%), Gaps = 51/621 (8%)
Query: 11 PFHS-DHCCRLASLVDTCKSIQQIK--QTHAQLVTTALISHHVSANKFLKLVADASLSY- 66
P H+ + C L L+ + ++ IK Q H +V + L + AN + + + L +
Sbjct: 11 PCHNYNQICDL--LLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFD 68
Query: 67 AHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGAC 126
+ + F+ PQ ++++I + + + +++ L P+ + +C
Sbjct: 69 SRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMA--GNLRPDDHVLPSATKSC 126
Query: 127 GNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWN 186
G V ++K G D++VFV ++L+ MY K G + Y
Sbjct: 127 AILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVY----------------- 169
Query: 187 TMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKP 246
A+++FDEM +++VV+WS ++ GY Q+G EAL F L
Sbjct: 170 --------------ARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAV 215
Query: 247 NEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVF 306
N+Y+F S ++ C+N L+ G+ IH + + + +S++ +Y+KCG E A +VF
Sbjct: 216 NDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVF 275
Query: 307 WEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMV 366
E K + WNAM+ +A H + I++F++MK+ + PN +TF+ +LNACSH +V
Sbjct: 276 NEVPVK-NLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLV 334
Query: 367 EEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLN 426
+EG+ YF M + I P +HY +VD+L RAG L+EA ++I++MP+ P ++WGA+L
Sbjct: 335 DEGRYYFDQM-KESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLT 393
Query: 427 ACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDA----RMLREKSEIST 482
+C ++K+ E + E+ P G H+ L N Y++ GR+ DA ++LR++ E
Sbjct: 394 SCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGE--- 450
Query: 483 ATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVFGXXXXXX 542
KK G S +E + F G+R H +S+E+Y L E+ +++ AGY+
Sbjct: 451 --KKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREV 508
Query: 543 XXXXXXXTALSVHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRVII 602
T + HSE+LAIAFGL+ PIR++KNLRVC DCH KF+S RVII
Sbjct: 509 DGDEKNQT-IRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVII 567
Query: 603 VRDRTRYHHFKDGICSCKDYW 623
VRD R+H F+DG CSC DYW
Sbjct: 568 VRDNNRFHRFEDGKCSCNDYW 588
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 321 bits (823), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 204/692 (29%), Positives = 334/692 (48%), Gaps = 92/692 (13%)
Query: 7 TLTKPFHSDHCCRLASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVADASLSY 66
T T PF + V S+++ K+ HA ++ +S N + L ++
Sbjct: 130 TFTYPF-------VIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAW 182
Query: 67 -AHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGA 125
A K+F+++P+ D+ +N+MI + L+ SLM+F+ + + G P+R+S + GA
Sbjct: 183 DAEKVFEEMPERDIVSWNSMISGY-LALGDGFSSLMLFKEMLK-CGFKPDRFSTMSALGA 240
Query: 126 CGNGLSVQEGEQVRSHAVKVGLDS--------------------------------NVFV 153
C + S + G+++ HAV+ +++ N+
Sbjct: 241 CSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVA 300
Query: 154 VNALIGMYGKWGLVE--------------------------------YGRKVFEWAVDKD 181
N +IG Y + G V GR + +A+ +
Sbjct: 301 WNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRG 360
Query: 182 LYSW----NTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFH 237
+I Y G + A+ +FD M E++V+SW++IIA YVQ G AL+ F
Sbjct: 361 FLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQ 420
Query: 238 RMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCG 297
+ P+ T S L A + ++L +G+ IH++I + N +L S++ MYA CG
Sbjct: 421 ELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCG 480
Query: 298 EIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALL 357
++E A + F H + V WN++I +A+HG ++ +F +M V+PNK TF +LL
Sbjct: 481 DLEDARKCF-NHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLL 539
Query: 358 NACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPD 417
ACS MV+EG YF M +YGI P IEHYGCM+DL+ R G A+ + MP P
Sbjct: 540 AACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPT 599
Query: 418 VAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDA---RML 474
IWG++LNA R +KD+ I +M+ ++ GC+VLL N+Y+ +GRW D ++L
Sbjct: 600 ARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLL 659
Query: 475 REKSEISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPV 534
E IS + + S++E G + F GDRSH + ++Y LD ++ ++ G +
Sbjct: 660 MESKGISRTSSR----STVEAKGKSHVFTNGDRSHVATNKIYEVLDVVS---RMVGEEDI 712
Query: 535 F---GXXXXXXXXXXXXXTALSVHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTK 591
+ + HS +LA FGL++T G + + N R+CR CH+ +
Sbjct: 713 YVHCVSRLRPETLVKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNTRICRKCHEFLE 772
Query: 592 FISKVYDRVIIVRDRTRYHHFKDGICSCKDYW 623
S++ R I+V D +HHF +G CSC +YW
Sbjct: 773 KASRLTRREIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 195/386 (50%), Gaps = 61/386 (15%)
Query: 54 KFLKLVADASL-SYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRD--S 110
+ L+ AD+ L A +LFD++ + D F++N MIK + SC + + +R +
Sbjct: 69 RALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFT----SCGLYIEAVQFYSRMVFA 124
Query: 111 GLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYG 170
G+ + +++ F + S++EG+++ + +K+G S+V+V N+L
Sbjct: 125 GVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSL------------- 171
Query: 171 RKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFM 230
I+ Y+ G A+++F+EM E+D+VSW+++I+GY+ +G
Sbjct: 172 ------------------ISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGF 213
Query: 231 EALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERL-LASI 289
+L F ML+ G KP+ ++ +SAL ACS++ + GK IH R I+ + + + SI
Sbjct: 214 SSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSI 273
Query: 290 IDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVEN-VSP 348
+DMY+K GE+ A R+F +R + WN MIG +A +G+ ++A FQKM +N + P
Sbjct: 274 LDMYSKYGEVSYAERIF-NGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQP 332
Query: 349 NKVTFVALLNACS-------HGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGL 401
+ +T + LL A + HGY + G +P + ++D+ G
Sbjct: 333 DVITSINLLPASAILEGRTIHGYAMRR------------GFLPHMVLETALIDMYGECGQ 380
Query: 402 LKEAEDMISSMPMAPDVAIWGAVLNA 427
LK AE + M +V W +++ A
Sbjct: 381 LKSAEVIFDRMA-EKNVISWNSIIAA 405
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 318 bits (816), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 165/485 (34%), Positives = 279/485 (57%), Gaps = 39/485 (8%)
Query: 20 LASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVAD----ASLSYAHKLFDQIP 75
+ S + KS+ +I+Q HA ++ T L SA+K + A ++SYAH + ++I
Sbjct: 42 ILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIG 101
Query: 76 QPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEG 135
P+ F +N++I+A++ S S+ +L VFR + + P++YSF F AC +EG
Sbjct: 102 SPNGFTHNSVIRAYANS-STPEVALTVFREMLLGP-VFPDKYSFTFVLKACAAFCGFEEG 159
Query: 136 EQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGS 195
Q+ +K GL ++VFV N L+ +YG+ G E RKV + +D SWN++++AY+
Sbjct: 160 RQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEK 219
Query: 196 GNMSQAKELFDEMQEQ-------------------------------DVVSWSTIIAGYV 224
G + +A+ LFDEM+E+ DVVSW+ ++ Y
Sbjct: 220 GLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYA 279
Query: 225 QVGCFMEALDFFHRMLQ-VGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNE 283
VGC+ E L+ F++ML KP+ +T VS L+AC++L +L QG+W+H +I + I++
Sbjct: 280 HVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEG 339
Query: 284 RLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKV 343
L +++DMY+KCG+I+ A VF +KR V WN++I ++HG +A+++F +M
Sbjct: 340 FLATALVDMYSKCGKIDKALEVF-RATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVY 398
Query: 344 ENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLK 403
E PN +TF+ +L+AC+H M+++ + F +M S Y + P IEHYGCMVDLL R G ++
Sbjct: 399 EGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIE 458
Query: 404 EAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYS 463
EAE++++ +P + ++L AC+ + +E+ RI + E++ + + N+Y+
Sbjct: 459 EAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYA 518
Query: 464 SSGRW 468
S GRW
Sbjct: 519 SDGRW 523
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 318 bits (814), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 179/497 (36%), Positives = 281/497 (56%), Gaps = 6/497 (1%)
Query: 33 IKQTHAQLVTTALISHHVSANKFLKLVADASLSYAHKLFDQIPQPDLFIYNTMIKAHSLS 92
IKQ HA + T + + + +L+ +L YA KLFD F+YN +I+A+ +
Sbjct: 4 IKQLHAHCLRTGVDE---TKDLLQRLLLIPNLVYARKLFDHHQNSCTFLYNKLIQAYYVH 60
Query: 93 PSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVF 152
++S++++ LL+ D GL P+ ++F F F A + S + + S + G +S+ F
Sbjct: 61 HQP-HESIVLYNLLSFD-GLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSF 118
Query: 153 VVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQD 212
LI Y K G + R+VF+ +D+ WN MI Y G+M A ELFD M ++
Sbjct: 119 CCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKN 178
Query: 213 VVSWSTIIAGYVQVGCFMEALDFFHRMLQ-VGPKPNEYTFVSALAACSNLVALDQGKWIH 271
V SW+T+I+G+ Q G + EAL F M + KPN T VS L AC+NL L+ G+ +
Sbjct: 179 VTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLE 238
Query: 272 SFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKP 331
+ N + + I+MY+KCG I+ A R+F E +R + WN+MIG A HGK
Sbjct: 239 GYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKH 298
Query: 332 SEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGC 391
EA+ +F +M E P+ VTFV LL AC HG MV +G+ F+ M + I P++EHYGC
Sbjct: 299 DEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGC 358
Query: 392 MVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNH 451
M+DLL R G L+EA D+I +MPM PD +WG +L AC + ++E + +++P +
Sbjct: 359 MIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTN 418
Query: 452 VGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNGTFYQFLVGDRSHPQ 511
G V++ NIY+++ +W+ +R+ + T TK +E+ ++F V D+SHP+
Sbjct: 419 PGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKSHPR 478
Query: 512 SRELYSFLDEMTTKLKI 528
S E+Y L+E+ ++K+
Sbjct: 479 SYEIYQVLEEIFRRMKL 495
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 316 bits (809), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 174/509 (34%), Positives = 289/509 (56%), Gaps = 9/509 (1%)
Query: 20 LASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVADA-SLSYAHKLFDQIPQPD 78
L S++ +CK+I + HA+++ T + +++ + S+ YA+ +F + P+
Sbjct: 32 LISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPN 91
Query: 79 LFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQV 138
+++Y MI S S D + ++ + +S L P+ Y AC ++ ++
Sbjct: 92 VYLYTAMIDGFVSSGRSA-DGVSLYHRMIHNSVL-PDNYVITSVLKAC----DLKVCREI 145
Query: 139 RSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNM 198
+ +K+G S+ V ++ +YGK G + +K+F+ D+D + MI Y G +
Sbjct: 146 HAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFI 205
Query: 199 SQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAAC 258
+A ELF +++ +D V W+ +I G V+ +AL+ F M NE+T V L+AC
Sbjct: 206 KEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSAC 265
Query: 259 SNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPW 318
S+L AL+ G+W+HSF+ ++++ + ++I+MY++CG+I A RVF K V +
Sbjct: 266 SDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDK-DVISY 324
Query: 319 NAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVS 378
N MI G AMHG EAI F+ M PN+VT VALLNACSHG +++ G F M
Sbjct: 325 NTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKR 384
Query: 379 DYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGY 438
+ + P+IEHYGC+VDLL R G L+EA I ++P+ PD + G +L+AC+I+ +ME G
Sbjct: 385 VFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGE 444
Query: 439 RIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNGT 498
+I + + E + G +VLL N+Y+SSG+W ++ +RE S + +K PGCS+IE++
Sbjct: 445 KIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRE-SMRDSGIEKEPGCSTIEVDNQ 503
Query: 499 FYQFLVGDRSHPQSRELYSFLDEMTTKLK 527
++FLVGD +HP +Y L E+ L+
Sbjct: 504 IHEFLVGDIAHPHKEAIYQRLQELNRILR 532
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 315 bits (808), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 192/592 (32%), Positives = 296/592 (50%), Gaps = 38/592 (6%)
Query: 34 KQTHAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIPQPDLFIYNTMIKAHSLS 92
K H Q++ T + L+L +S A K+F+++P+ D+ ++ MI A
Sbjct: 267 KGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMI-ARFCQ 325
Query: 93 PSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVF 152
CN+++ +F + R++ + PN ++ C G GEQ+ VKVG D +++
Sbjct: 326 NGFCNEAVDLF-IRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIY 384
Query: 153 VVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQD 212
V NA +I Y M A +LF E+ ++
Sbjct: 385 VSNA-------------------------------LIDVYAKCEKMDTAVKLFAELSSKN 413
Query: 213 VVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHS 272
VSW+T+I GY +G +A F L+ E TF SAL AC++L ++D G +H
Sbjct: 414 EVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHG 473
Query: 273 FIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPS 332
+ + S+IDMYAKCG+I+ A VF E V WNA+I G++ HG
Sbjct: 474 LAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETI-DVASWNALISGYSTHGLGR 532
Query: 333 EAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCM 392
+A+++ MK + PN +TF+ +L+ CS+ ++++G+ F M+ D+GI P +EHY CM
Sbjct: 533 QALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCM 592
Query: 393 VDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHV 452
V LL R+G L +A +I +P P V IW A+L+A + E R I +++P
Sbjct: 593 VRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDE 652
Query: 453 GCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNGTFYQFLVGDRSHPQS 512
+VL+ N+Y+ + +W + +R KS KK PG S IE G + F VG HP
Sbjct: 653 ATYVLVSNMYAGAKQWANVASIR-KSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDM 711
Query: 513 RELYSFLDEMTTKLKIAGYVPVFGXXXXXXXXXXXXXTALSVHSEKLAIAFGLLNTAPG- 571
+ + L+ + K AGYVP L VHSE+LA+A+GL+
Sbjct: 712 KLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKR-LWVHSERLALAYGLVRMPSSR 770
Query: 572 TPIRIVKNLRVCRDCHQVTKFISKVYDRVIIVRDRTRYHHFKDGICSCKDYW 623
I I+KNLR+C DCH K IS + R +++RD R+HHF G+CSC D+W
Sbjct: 771 NRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 191/413 (46%), Gaps = 56/413 (13%)
Query: 45 LISHHVSANKFLKLVADASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFR 104
L + ++ N ++K D A LFD++P+ + + T+ + ++ C D + ++
Sbjct: 84 LFATNILLNAYVKAGFDKD---ALNLFDEMPERNNVSFVTLAQGYA-----CQDPIGLYS 135
Query: 105 LLTRDS-GLSPNRY-SFVFTFGACGNGLSVQEGE---QVRSHAVKVGLDSNVFVVNALIG 159
L R+ L+P+ + SF+ F +S+ + E + S VK+G DSN FV ALI
Sbjct: 136 RLHREGHELNPHVFTSFLKLF------VSLDKAEICPWLHSPIVKLGYDSNAFVGAALIN 189
Query: 160 MYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTI 219
AY G++ A+ +F+ + +D+V W+ I
Sbjct: 190 -------------------------------AYSVCGSVDSARTVFEGILCKDIVVWAGI 218
Query: 220 IAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEI 279
++ YV+ G F ++L M G PN YTF +AL A L A D K +H I +
Sbjct: 219 VSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCY 278
Query: 280 KMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQ 339
++ R+ ++ +Y + G++ A +VF E K V PW+ MI F +G +EA+ +F
Sbjct: 279 VLDPRVGVGLLQLYTQLGDMSDAFKVFNEM-PKNDVVPWSFMIARFCQNGFCNEAVDLFI 337
Query: 340 KMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRA 399
+M+ V PN+ T ++LN C+ G G+ L+V G +I ++D+ ++
Sbjct: 338 RMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVK-VGFDLDIYVSNALIDVYAKC 396
Query: 400 GLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHV 452
+ A + + + +V+ W V+ Y+++ G + + +E N V
Sbjct: 397 EKMDTAVKLFAELSSKNEVS-WNTVIVG---YENLGEGGKAFSMFREALRNQV 445
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 314 bits (805), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 195/558 (34%), Positives = 288/558 (51%), Gaps = 39/558 (6%)
Query: 67 AHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGAC 126
A KLF Q+P ++ + TMI + S ++L +F+ + R S +R F AC
Sbjct: 178 ALKLFKQMPGKNVISWTTMICGLDQNERS-GEALDLFKNMLRCCIKSTSR-PFTCVITAC 235
Query: 127 GNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWN 186
N + G QV +K+G +V +LI Y + RKVF
Sbjct: 236 ANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVF------------ 283
Query: 187 TMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKP 246
DE + V W+ +++GY +AL F ML+ P
Sbjct: 284 -------------------DEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILP 324
Query: 247 NEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVF 306
N+ TF S L +CS L LD GK +H + ++ + + S++ MY+ G + A VF
Sbjct: 325 NQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVF 384
Query: 307 WEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMV 366
+ K+ + WN++I G A HG+ A +F +M N P+++TF LL+ACSH +
Sbjct: 385 IK-IFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFL 443
Query: 367 EEGKLYFRLMVSDYGIIP-EIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVL 425
E+G+ F M S I +I+HY CMVD+L R G LKEAE++I M + P+ +W A+L
Sbjct: 444 EKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALL 503
Query: 426 NACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATK 485
+ACR++ D++RG + I +D +VLL NIY+S+GRW++ LR K + + K
Sbjct: 504 SACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMK 563
Query: 486 KIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVFGXXXXXXXXX 545
K PG S + + G ++F GD+ P +Y L+ + KLK GY P +
Sbjct: 564 K-PGSSWVVIRGKKHEFFSGDQ--PHCSRIYEKLEFLREKLKELGYAPDY-RSALHDVED 619
Query: 546 XXXXTALSVHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRVIIVRD 605
L HSE+LAIAFGL+NT G+ + ++KNLRVC DCH V K IS V R I++RD
Sbjct: 620 EQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRD 679
Query: 606 RTRYHHFKDGICSCKDYW 623
R+HHFK+G CSC DYW
Sbjct: 680 PIRFHHFKNGTCSCGDYW 697
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 152/305 (49%), Gaps = 13/305 (4%)
Query: 67 AHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGAC 126
A ++F+Q+P P + +Y MI ++ S + D+L +F + +S N S + C
Sbjct: 54 AREVFNQVPSPHVSLYTKMITGYTRS-NRLVDALNLFDEMPVRDVVSWN--SMISGCVEC 110
Query: 127 GN-GLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSW 185
G+ +V+ +++ + +V A++ + G V+ ++F KD +W
Sbjct: 111 GDMNTAVKLFDEMP--------ERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAW 162
Query: 186 NTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPK 245
N+M+ Y+ G + A +LF +M ++V+SW+T+I G Q EALD F ML+ K
Sbjct: 163 NSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIK 222
Query: 246 PNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRV 305
F + AC+N A G +H I + E + AS+I YA C I + +V
Sbjct: 223 STSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKV 282
Query: 306 FWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYM 365
F + +V W A++ G++++ K +A+ +F M ++ PN+ TF + LN+CS
Sbjct: 283 F-DEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGT 341
Query: 366 VEEGK 370
++ GK
Sbjct: 342 LDWGK 346
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 135/297 (45%), Gaps = 36/297 (12%)
Query: 35 QTHAQLVTTALISHHVSANKFLKLVADAS-LSYAHKLFDQIPQPDLFIYNTMIKAHSLSP 93
Q H ++ + + + A+ + + K+FD+ + ++ ++ +SL+
Sbjct: 246 QVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNK 305
Query: 94 SSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFV 153
D+L +F + R+S L PN+ +F +C ++ G+++ AVK+GL+++ FV
Sbjct: 306 KH-EDALSIFSGMLRNSIL-PNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFV 363
Query: 154 VNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDV 213
N+L+ MY G V VF K + SWN++I VG + K
Sbjct: 364 GNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSII---VGCAQHGRGK----------- 409
Query: 214 VSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSF 273
W+ +I F +M+++ +P+E TF L+ACS+ L++G+ + +
Sbjct: 410 --WAFVI---------------FGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYY 452
Query: 274 IGRGEIKMNERL--LASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMH 328
+ G ++ ++ ++D+ +CG+++ A + K W A++ MH
Sbjct: 453 MSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMH 509
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 157/378 (41%), Gaps = 55/378 (14%)
Query: 132 VQEGEQVRSHAVKVGL-DSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIA 190
V G+ RS +V V + V + N L+ ++ R+VF + + MI
Sbjct: 20 VIHGKCYRSFSVTVEFQNREVLICNHLLSRR-----IDEAREVFNQVPSPHVSLYTKMIT 74
Query: 191 AYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYT 250
Y S + A LFDEM +DVVSW+++I+G V+ G A+ F M P+ + +
Sbjct: 75 GYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEM----PERSVVS 130
Query: 251 FVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHN 310
+ + + C +DQ + + +K + S++ Y + G+++ A ++F +
Sbjct: 131 WTAMVNGCFRSGKVDQAE---RLFYQMPVK-DTAAWNSMVHGYLQFGKVDDALKLFKQMP 186
Query: 311 AKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACS--------- 361
K V W MI G + + EA+ +F+ M + F ++ AC+
Sbjct: 187 GK-NVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGI 245
Query: 362 --HGYMVEEGKLYFRL----MVSDYGIIPEI------------EHYGCMVDLLSRAGLLK 403
HG +++ G LY +++ Y I E LLS L K
Sbjct: 246 QVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNK 305
Query: 404 EAEDMISSM------PMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVL 457
+ ED +S + P+ + + + LN+C ++ G + + ++ +
Sbjct: 306 KHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLG---LETDAF 362
Query: 458 LGN----IYSSSGRWNDA 471
+GN +YS SG NDA
Sbjct: 363 VGNSLVVMYSDSGNVNDA 380
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 314 bits (804), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 170/582 (29%), Positives = 305/582 (52%), Gaps = 38/582 (6%)
Query: 37 HAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSS 95
H +V + L + + N + + +S + ++ Q+P+ D+ +N +I ++
Sbjct: 368 HGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYA-EDED 426
Query: 96 CNDSLMVFRLLTRDSGLSPNRYSFVFTFGACG-NGLSVQEGEQVRSHAVKVGLDSNVFVV 154
+ +L F+ + R G+S N + V AC G ++ G+ + ++ V G +S+ V
Sbjct: 427 PDKALAAFQTM-RVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVK 485
Query: 155 NALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVV 214
N+LI M Y G++S +++LF+ + ++++
Sbjct: 486 NSLITM-------------------------------YAKCGDLSSSQDLFNGLDNRNII 514
Query: 215 SWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFI 274
+W+ ++A G E L +M G ++++F L+A + L L++G+ +H
Sbjct: 515 TWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLA 574
Query: 275 GRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEA 334
+ + + + + DMY+KCGEI ++ + R + WN +I HG E
Sbjct: 575 VKLGFEHDSFIFNAAADMYSKCGEIGEVVKML-PPSVNRSLPSWNILISALGRHGYFEEV 633
Query: 335 IKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVD 394
F +M + P VTFV+LL ACSHG +V++G Y+ ++ D+G+ P IEH C++D
Sbjct: 634 CATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVID 693
Query: 395 LLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGC 454
LL R+G L EAE IS MPM P+ +W ++L +C+I+ +++RG + + +++P
Sbjct: 694 LLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSV 753
Query: 455 HVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSRE 514
+VL N+++++GRW D +R++ KK CS ++L F +GDR+HPQ+ E
Sbjct: 754 YVLSSNMFATTGRWEDVENVRKQMGFKNIKKK-QACSWVKLKDKVSSFGIGDRTHPQTME 812
Query: 515 LYSFLDEMTTKLKIAGYVPVFGXXXXXXXXXXXXXTALSVHSEKLAIAFGLLNTAPGTPI 574
+Y+ L+++ +K +GYV L HSE+LA+A+ L++T G+ +
Sbjct: 813 IYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHN-LWNHSERLALAYALMSTPEGSTV 871
Query: 575 RIVKNLRVCRDCHQVTKFISKVYDRVIIVRDRTRYHHFKDGI 616
RI KNLR+C DCH V KF+S+V R I++RD+ R+HHF+ G+
Sbjct: 872 RIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGL 913
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 186/396 (46%), Gaps = 38/396 (9%)
Query: 34 KQTHAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIPQPDLFIYNTMIKAHSLS 92
+Q Q+V + L S N + ++ ++ YA+ +FDQ+ + D +N++ A++
Sbjct: 163 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYA-Q 221
Query: 93 PSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVF 152
+S +F L+ R N + G+ + G + VK+G DS V
Sbjct: 222 NGHIEESFRIFSLMRRFHD-EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVC 280
Query: 153 VVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQD 212
V N L+ M Y G+G +A +F +M +D
Sbjct: 281 VCNTLLRM-------------------------------YAGAGRSVEANLVFKQMPTKD 309
Query: 213 VVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHS 272
++SW++++A +V G ++AL M+ G N TF SALAAC ++G+ +H
Sbjct: 310 LISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHG 369
Query: 273 FIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPS 332
+ + N+ + +++ MY K GE+ + RV + +R V WNA+IGG+A P
Sbjct: 370 LVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQM-PRRDVVAWNALIGGYAEDEDPD 428
Query: 333 EAIKVFQKMKVENVSPNKVTFVALLNAC-SHGYMVEEGKLYFRLMVSDYGIIPEIEHYGC 391
+A+ FQ M+VE VS N +T V++L+AC G ++E GK +VS G +
Sbjct: 429 KALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVS-AGFESDEHVKNS 487
Query: 392 MVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNA 427
++ + ++ G L ++D+ + + ++ W A+L A
Sbjct: 488 LITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAA 522
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 181/415 (43%), Gaps = 53/415 (12%)
Query: 7 TLTKPFHSD-HCCRLASLVDTCKSIQQIK---QTHAQLVTTALISHHVSANKFLKLVADA 62
+L + FH + + +++L+ + K H +V S N L++ A A
Sbjct: 233 SLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGA 292
Query: 63 SLSY-AHKLFDQIPQPDLFIYNTMIKAHSLSPSSCND--SLMVFRLLTR--DSGLSPNRY 117
S A+ +F Q+P DL +N SL S ND SL LL SG S N
Sbjct: 293 GRSVEANLVFKQMPTKDLISWN------SLMASFVNDGRSLDALGLLCSMISSGKSVNYV 346
Query: 118 SFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWA 177
+F AC ++G + V GL N + NAL+ MYGK G + R+V
Sbjct: 347 TFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQM 406
Query: 178 VDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFH 237
+D+ +WN +I Y E ++ D +AL F
Sbjct: 407 PRRDVVAWNALIGGYA-------------EDEDPD------------------KALAAFQ 435
Query: 238 RMLQVGPKPNEYTFVSALAAC---SNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYA 294
M G N T VS L+AC +L L++GK +H++I + +E + S+I MYA
Sbjct: 436 TMRVEGVSSNYITVVSVLSACLLPGDL--LERGKPLHAYIVSAGFESDEHVKNSLITMYA 493
Query: 295 KCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFV 354
KCG++ S+ +F + R + WNAM+ A HG E +K+ KM+ VS ++ +F
Sbjct: 494 KCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFS 552
Query: 355 ALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMI 409
L+A + ++EEG+ L V G + + D+ S+ G + E M+
Sbjct: 553 EGLSAAAKLAVLEEGQQLHGLAVK-LGFEHDSFIFNAAADMYSKCGEIGEVVKML 606
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 176/413 (42%), Gaps = 41/413 (9%)
Query: 20 LASLVDTC----KSIQQIKQTHAQLVTTALISHHVSANKFLKLVADASL-SYAHKLFDQI 74
+ASLV C ++ Q H + + L+S + L L L S + K+F+++
Sbjct: 44 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 103
Query: 75 PQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQE 134
P ++ + +++ +S + + +++ + R G+ N S +CG
Sbjct: 104 PDRNVVSWTSLMVGYS-DKGEPEEVIDIYKGM-RGEGVGCNENSMSLVISSCGLLKDESL 161
Query: 135 GEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVG 194
G Q+ VK GL+S + V N+LI M G G V+Y +F+ ++D SWN++ AAY
Sbjct: 162 GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQ 221
Query: 195 SGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSA 254
+G++ ++ +F M+ FH + N T +
Sbjct: 222 NGHIEESFRIFSLMRR-------------------------FH------DEVNSTTVSTL 250
Query: 255 LAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRK 314
L+ ++ G+ IH + + + +++ MYA G A+ VF + K
Sbjct: 251 LSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDL 310
Query: 315 VWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFR 374
+ WN+++ F G+ +A+ + M S N VTF + L AC E+G++
Sbjct: 311 I-SWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHG 369
Query: 375 LMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNA 427
L+V G+ +V + + G + E+ ++ MP DV W A++
Sbjct: 370 LVVVS-GLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALIGG 420
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 114/255 (44%), Gaps = 33/255 (12%)
Query: 109 DSGLSPNRYSFVFTFGACG-NGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLV 167
D G+ P+ + ACG +G +EG QV K GL S+V+V A++ +YG +GLV
Sbjct: 34 DLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLV 93
Query: 168 EYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVG 227
RKVF +EM +++VVSW++++ GY G
Sbjct: 94 SCSRKVF-------------------------------EEMPDRNVVSWTSLMVGYSDKG 122
Query: 228 CFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLA 287
E +D + M G NE + +++C L G+ I + + ++ +
Sbjct: 123 EPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVEN 182
Query: 288 SIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVS 347
S+I M G ++ A+ +F + ++R WN++ +A +G E+ ++F M+ +
Sbjct: 183 SLISMLGSMGNVDYANYIF-DQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDE 241
Query: 348 PNKVTFVALLNACSH 362
N T LL+ H
Sbjct: 242 VNSTTVSTLLSVLGH 256
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 133/315 (42%), Gaps = 37/315 (11%)
Query: 30 IQQIKQTHAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIPQPDLFIYNTMIKA 88
+++ K HA +V+ S N + + A LS + LF+ + ++ +N M+ A
Sbjct: 463 LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAA 522
Query: 89 HSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLD 148
++ +V ++ R G+S +++SF A ++EG+Q+ AVK+G +
Sbjct: 523 NAHHGHGEEVLKLVSKM--RSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFE 580
Query: 149 SNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEM 208
+ F+ NA MY K G + K+ +V++ L SWN +I+A
Sbjct: 581 HDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISA----------------- 623
Query: 209 QEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGK 268
+ G F E FH ML++G KP TFVS L ACS+ +D+G
Sbjct: 624 --------------LGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGL 669
Query: 269 WIHSFIGR--GEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFA 326
+ I R G E + +ID+ + G + A + K W +++
Sbjct: 670 AYYDMIARDFGLEPAIEHCIC-VIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCK 728
Query: 327 MHGKPSEAIKVFQKM 341
+HG K + +
Sbjct: 729 IHGNLDRGRKAAENL 743
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 122/241 (50%), Gaps = 8/241 (3%)
Query: 208 MQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVAL-DQ 266
M ++ VSW+T+++G V+VG ++E ++FF +M +G KP+ + S + AC ++ +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 267 GKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFA 326
G +H F+ + + + + +I+ +Y G + + +VF E R V W +++ G++
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVF-EEMPDRNVVSWTSLMVGYS 119
Query: 327 MHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEE--GKLYFRLMVSDYGIIP 384
G+P E I +++ M+ E V N+ + ++++C G + +E G+ +V G+
Sbjct: 120 DKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC--GLLKDESLGRQIIGQVVKS-GLES 176
Query: 385 EIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRII 444
++ ++ +L G + A + M D W ++ A +E +RI ++
Sbjct: 177 KLAVENSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIAAAYAQNGHIEESFRIFSLM 235
Query: 445 K 445
+
Sbjct: 236 R 236
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 313 bits (803), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 165/427 (38%), Positives = 260/427 (60%), Gaps = 6/427 (1%)
Query: 110 SGLSPNRYSFVFTFGACGNGLSVQE--GEQVRSHAVKVGLDSN-VFVVNALIGMYGKWGL 166
+G+ PN +F+ CG+ S E G+ + +A K+GLD N V V A+IGMY K G
Sbjct: 65 AGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGR 124
Query: 167 VEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQV 226
+ R VF++ DK+ +WNTMI Y+ SG + A ++FD+M E+D++SW+ +I G+V+
Sbjct: 125 FKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKK 184
Query: 227 GCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLL 286
G EAL +F M G KP+ ++AL AC+NL AL G W+H ++ + K N R+
Sbjct: 185 GYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVS 244
Query: 287 ASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENV 346
S+ID+Y +CG +E A +VF+ KR V WN++I GFA +G E++ F+KM+ +
Sbjct: 245 NSLIDLYCRCGCVEFARQVFYNME-KRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGF 303
Query: 347 SPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAE 406
P+ VTF L ACSH +VEEG YF++M DY I P IEHYGC+VDL SRAG L++A
Sbjct: 304 KPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDAL 363
Query: 407 DMISSMPMAPDVAIWGAVLNACRIY-KDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSS 465
++ SMPM P+ + G++L AC + ++ R+ + + +++ +V+L N+Y++
Sbjct: 364 KLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAAD 423
Query: 466 GRWNDARMLREKSEISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTK 525
G+W A +R K + KK PG SSIE++ + F+ GD +H ++ + L+ +++
Sbjct: 424 GKWEGASKMRRKMK-GLGLKKQPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSD 482
Query: 526 LKIAGYV 532
L++ G V
Sbjct: 483 LRLQGCV 489
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 139/346 (40%), Gaps = 86/346 (24%)
Query: 206 DEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALD 265
++ + VSW++ I + G EA F M G +PN TF++ L+ C + +
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGS 88
Query: 266 Q--GKWIHSF-----------------IG----RGEIK-----------MNERLLASIID 291
+ G +H + IG RG K N ++ID
Sbjct: 89 EALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMID 148
Query: 292 MYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKV 351
Y + G++++A+++F + +R + W AMI GF G EA+ F++M++ V P+ V
Sbjct: 149 GYMRSGQVDNAAKMF-DKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYV 207
Query: 352 TFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEH----YGCMVDLLSRAGLLKEAED 407
+A LNAC++ G L F L V Y + + ++ ++DL R G ++ A
Sbjct: 208 AIIAALNACTN-----LGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQ 262
Query: 408 MISSMP----------------------------------MAPDVAIWGAVLNACRIYKD 433
+ +M PD + L AC
Sbjct: 263 VFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGL 322
Query: 434 MERGYRIGRIIK---EMDP--NHVGCHVLLGNIYSSSGRWNDARML 474
+E G R +I+K + P H GC V ++YS +GR DA L
Sbjct: 323 VEEGLRYFQIMKCDYRISPRIEHYGCLV---DLYSRAGRLEDALKL 365
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 143/357 (40%), Gaps = 110/357 (30%)
Query: 40 LVTTALISHHVSANKFLKLVADASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDS 99
+V TA+I + +F K A +FD + + +NTMI + S N +
Sbjct: 110 MVGTAIIGMYSKRGRFKK---------ARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAA 160
Query: 100 LMVFRLLTRD-----------------------------SGLSPNRYSFVFTFGACGNGL 130
M ++ RD SG+ P+ + + AC N
Sbjct: 161 KMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLG 220
Query: 131 SVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIA 190
++ G V + + +NV V N+LI +Y + G VE+ R+VF + + SWN++I
Sbjct: 221 ALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIV 280
Query: 191 AYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYT 250
+ +GN ++ F +MQE+ G KP+ T
Sbjct: 281 GFAANGNAHESLVYFRKMQEK-------------------------------GFKPDAVT 309
Query: 251 FVSALAACSNLVALDQGKWIHSF-IGRGEIKMNERL--LASIIDMYAKCGEIESASRVFW 307
F AL ACS++ +++G + F I + + +++ R+ ++D+Y++ G +E
Sbjct: 310 FTGALTACSHVGLVEEG--LRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLE------- 360
Query: 308 EHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACS-HG 363
+A+K+ Q M ++ PN+V +LL ACS HG
Sbjct: 361 -------------------------DALKLVQSMPMK---PNEVVIGSLLAACSNHG 389
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 311 bits (796), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 187/563 (33%), Positives = 299/563 (53%), Gaps = 77/563 (13%)
Query: 27 CKSIQQIKQTHAQLVTTALISHHVSANKFLKLVADASL----SYAHKLFDQIPQPDLFIY 82
C ++ Q+KQ HAQ++ L H + KL++ SL + A ++F+Q+ +P++ +
Sbjct: 29 CANLNQVKQLHAQIIRRNL---HEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLC 85
Query: 83 NTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHA 142
N++I+AH+ + S + VF + R GL + +++ F AC + + + +H
Sbjct: 86 NSLIRAHAQN-SQPYQAFFVFSEMQR-FGLFADNFTYPFLLKACSGQSWLPVVKMMHNHI 143
Query: 143 VKVGLDSNVFVVNALIGMYGK-----------------------W-----GLVEYG---- 170
K+GL S+++V NALI Y + W GLV+ G
Sbjct: 144 EKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRD 203
Query: 171 -RKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWST----------- 218
R++F+ +DL SWNTM+ Y MS+A ELF++M E++ VSWST
Sbjct: 204 ARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDM 263
Query: 219 ----------------------IIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALA 256
IIAGY + G EA +M+ G K + +S LA
Sbjct: 264 EMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILA 323
Query: 257 ACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVW 316
AC+ L G IHS + R + N +L +++DMYAKCG ++ A VF K+ +
Sbjct: 324 ACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVF-NDIPKKDLV 382
Query: 317 PWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLM 376
WN M+ G +HG EAI++F +M+ E + P+KVTF+A+L +C+H +++EG YF M
Sbjct: 383 SWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSM 442
Query: 377 VSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMER 436
Y ++P++EHYGC+VDLL R G LKEA ++ +MPM P+V IWGA+L ACR++ +++
Sbjct: 443 EKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDI 502
Query: 437 GYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELN 496
+ + ++DP G + LL NIY+++ W +R K + S +K G SS+EL
Sbjct: 503 AKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMK-SMGVEKPSGASSVELE 561
Query: 497 GTFYQFLVGDRSHPQSRELYSFL 519
++F V D+SHP+S ++Y L
Sbjct: 562 DGIHEFTVFDKSHPKSDQIYQML 584
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 310 bits (794), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 166/503 (33%), Positives = 287/503 (57%), Gaps = 10/503 (1%)
Query: 28 KSIQQIKQTHAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIPQPDLFIYNTMI 86
+ + + ++ H V L +N + + A + HK+FD++PQ D+ +N +I
Sbjct: 60 RKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLI 119
Query: 87 KAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVG 146
++ + D++ VF+ ++++S L + + V T AC +++ GE++ V
Sbjct: 120 SSY-VGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVV-TE 177
Query: 147 LDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFD 206
+ +V + NAL+ M+ K G ++ R VF+ DK++ W +M+ YV +G + +A+ LF+
Sbjct: 178 FEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFE 237
Query: 207 EMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQ 266
+DVV W+ ++ GYVQ F EAL+ F M G +P+ + VS L C+ AL+Q
Sbjct: 238 RSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQ 297
Query: 267 GKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFA 326
GKWIH +I + +++ + +++DMYAKCG IE+A VF+E +R W ++I G A
Sbjct: 298 GKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIK-ERDTASWTSLIYGLA 356
Query: 327 MHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEI 386
M+G A+ ++ +M+ V + +TFVA+L AC+HG V EG+ F M + + P+
Sbjct: 357 MNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKS 416
Query: 387 EHYGCMVDLLSRAGLLKEAEDMISSMPMAPD---VAIWGAVLNACRIYKDMERGYRIGRI 443
EH C++DLL RAGLL EAE++I M D V ++ ++L+A R Y +++ R+
Sbjct: 417 EHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEK 476
Query: 444 IKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNGTFYQFL 503
+++++ + H LL ++Y+S+ RW D +R K + +K PGCSSIE++G ++F+
Sbjct: 477 LEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMK-DLGIRKFPGCSSIEIDGVGHEFI 535
Query: 504 VGDR--SHPQSRELYSFLDEMTT 524
VGD SHP+ E+ S L + T
Sbjct: 536 VGDDLLSHPKMDEINSMLHQTTN 558
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 189/412 (45%), Gaps = 78/412 (18%)
Query: 74 IPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQ 133
+ P L +YN M+K+ + S L +F L R GL P+ ++ + G V
Sbjct: 6 LQTPSLLMYNKMLKSLA-DGKSFTKVLALFGEL-RGQGLYPDNFTLPVVLKSIGRLRKVI 63
Query: 134 EGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYV 193
EGE+V +AVK GL+ + +V N+L+GMY G +E KVF+ +D+ SWN +I++YV
Sbjct: 64 EGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYV 123
Query: 194 GSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGP-KPNEYTFV 252
G+G F +A+ F RM Q K +E T V
Sbjct: 124 GNGR-------------------------------FEDAIGVFKRMSQESNLKFDEGTIV 152
Query: 253 SALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESA---------- 302
S L+ACS L L+ G+ I+ F+ E +M+ R+ +++DM+ KCG ++ A
Sbjct: 153 STLSACSALKNLEIGERIYRFV-VTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDK 211
Query: 303 --------------------SRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMK 342
+RV +E + + V W AM+ G+ + EA+++F+ M+
Sbjct: 212 NVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQ 271
Query: 343 VENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLL 402
+ P+ V+LL C+ +E+GK + +++ + + +VD+ ++ G +
Sbjct: 272 TAGIRPDNFVLVSLLTGCAQTGALEQGK-WIHGYINENRVTVDKVVGTALVDMYAKCGCI 330
Query: 403 KEAEDMISSMPMAPDVAIWGAVL----------NACRIYKDMER-GYRIGRI 443
+ A ++ + D A W +++ A +Y +ME G R+ I
Sbjct: 331 ETALEVFYEIK-ERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAI 381
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 309 bits (791), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 178/587 (30%), Positives = 301/587 (51%), Gaps = 44/587 (7%)
Query: 76 QPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEG 135
+PD+ +N+++ ++ S D++ V + + + +GL P+ S A ++ G
Sbjct: 187 KPDIVTWNSLLSGYA-SKGLSKDAIAVLKRM-QIAGLKPSTSSISSLLQAVAEPGHLKLG 244
Query: 136 EQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFE---------W---------- 176
+ + + ++ L +V+V LI MY K G + Y R VF+ W
Sbjct: 245 KAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYA 304
Query: 177 ----------------AVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQ----DVVSW 216
+ D +WN++ + Y G +A ++ +M+E+ +VVSW
Sbjct: 305 CLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSW 364
Query: 217 STIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGR 276
+ I +G + G F AL F +M + G PN T + L L L GK +H F R
Sbjct: 365 TAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLR 424
Query: 277 GEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIK 336
+ + + +++DMY K G+++SA +FW K + WN M+ G+AM G+ E I
Sbjct: 425 KNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNK-SLASWNCMLMGYAMFGRGEEGIA 483
Query: 337 VFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLL 396
F M + P+ +TF ++L+ C + +V+EG YF LM S YGIIP IEH CMVDLL
Sbjct: 484 AFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLL 543
Query: 397 SRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHV 456
R+G L EA D I +M + PD IWGA L++C+I++D+E + ++ ++P++ ++
Sbjct: 544 GRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYM 603
Query: 457 LLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELY 516
++ N+YS+ RW D +R + + S I+++ T + F ++HP ++Y
Sbjct: 604 MMINLYSNLNRWEDVERIRNLMR-NNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIY 662
Query: 517 SFLDEMTTKLKIAGYVPVFGXXXXXXXXXXXXXTALSVHSEKLAIAFGLLNTAPGTPIRI 576
L ++ +++K +GYVP + H+EKLA+ +GL+ PIR+
Sbjct: 663 FELYKLVSEMKKSGYVPDTSCIHQDISDSEKEKLLMG-HTEKLAMTYGLIKKKGLAPIRV 721
Query: 577 VKNLRVCRDCHQVTKFISKVYDRVIIVRDRTRYHHFKDGICSCKDYW 623
VKN +C D H V K++S + +R I++++ R HHF+DG CSC D W
Sbjct: 722 VKNTNICSDSHTVAKYMSVLRNREIVLQEGARVHHFRDGKCSCNDSW 768
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 191/385 (49%), Gaps = 43/385 (11%)
Query: 63 SLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFT 122
SL +A+KLFD++P+ D +N ++ + L + ++ +FR + + SG + V
Sbjct: 38 SLGFANKLFDEMPKRDDLAWNEIVMVN-LRSGNWEKAVELFREM-QFSGAKAYDSTMVKL 95
Query: 123 FGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDL 182
C N EG Q+ + +++GL+SNV + N+LI MY + G +E RKVF D++L
Sbjct: 96 LQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNL 155
Query: 183 YSWNTMIAAYVGSGNMSQAKELFDEMQ----EQDVVSWSTIIAGYVQVGCFMEALDFFHR 238
SWN+++++Y G + A L DEM+ + D+V+W+++++GY G +A+ R
Sbjct: 156 SSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKR 215
Query: 239 MLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGE 298
M G KP+ + S L A + L GK IH +I R ++ + + ++IDMY K G
Sbjct: 216 MQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGY 275
Query: 299 IESASRVFWEHNAKRKV-W---------------------------------PWNAMIGG 324
+ A VF +AK V W WN++ G
Sbjct: 276 LPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASG 335
Query: 325 FAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACS-HGYMVEEGKLYFRLMVSDYGII 383
+A GKP +A+ V KMK + V+PN V++ A+ + CS +G K++ ++ + G+
Sbjct: 336 YATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKM--QEEGVG 393
Query: 384 PEIEHYGCMVDLLSRAGLLKEAEDM 408
P ++ +L LL +++
Sbjct: 394 PNAATMSTLLKILGCLSLLHSGKEV 418
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 158/375 (42%), Gaps = 79/375 (21%)
Query: 201 AKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSN 260
A +LFDEM ++D ++W+ I+ ++ G + +A++ F M G K + T V L CSN
Sbjct: 42 ANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSN 101
Query: 261 LVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVF----------WEH- 309
+G+ IH ++ R ++ N + S+I MY++ G++E + +VF W
Sbjct: 102 KEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSI 161
Query: 310 -----------------------NAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENV 346
K + WN+++ G+A G +AI V ++M++ +
Sbjct: 162 LSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGL 221
Query: 347 SPNKVTFVALLNACS-----------HGYM-------------------VEEGKLYFRLM 376
P+ + +LL A + HGY+ ++ G L + M
Sbjct: 222 KPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARM 281
Query: 377 VSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMP---MAPDVAIWGAVLNACRIYKD 433
V D I + +V LS A LLK+AE ++ M + PD W ++ +
Sbjct: 282 VFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGK 341
Query: 434 MERGYRIGRIIKE--MDPNHVGCHVLLGNIYSSSGRWNDA-----RMLREKSEISTATK- 485
E+ + +KE + PN V + S +G + +A +M E + AT
Sbjct: 342 PEKALDVIGKMKEKGVAPNVVSWTAIFSGC-SKNGNFRNALKVFIKMQEEGVGPNAATMS 400
Query: 486 ---KIPGCSSIELNG 497
KI GC S+ +G
Sbjct: 401 TLLKILGCLSLLHSG 415
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 307 bits (787), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 188/610 (30%), Positives = 316/610 (51%), Gaps = 44/610 (7%)
Query: 22 SLVDTC---KSIQQIKQTHAQLVTTALISHHVSANKFLKL-VADASLSYAHKLFDQIPQP 77
+LV+ C KSI+ +K+ + +++ N+ L + V + A +LFD+IP+
Sbjct: 128 ALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPER 187
Query: 78 DLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQ 137
+L+ Y ++I ++ + ++ +F+++ + ++F A S+ G+Q
Sbjct: 188 NLYSYYSIISGF-VNFGNYVEAFELFKMMWEELS-DCETHTFAVMLRASAGLGSIYVGKQ 245
Query: 138 VRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGN 197
+ A+K+G+ N FV LI MY K G +E R FE
Sbjct: 246 LHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFEC--------------------- 284
Query: 198 MSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAA 257
M E+ V+W+ +IAGY G EAL + M G +++T +
Sbjct: 285 ----------MPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRI 334
Query: 258 CSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWP 317
+ L L+ K H+ + R + +++D Y+K G +++A VF + ++ +
Sbjct: 335 STKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVF-DKLPRKNIIS 393
Query: 318 WNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMV 377
WNA++GG+A HG+ ++A+K+F+KM NV+PN VTF+A+L+AC++ + E+G F M
Sbjct: 394 WNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMS 453
Query: 378 SDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERG 437
+GI P HY CM++LL R GLL EA I P+ V +W A+LNACR+ +++E G
Sbjct: 454 EVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELG 513
Query: 438 YRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNG 497
+ + M P +G +V++ N+Y+S G+ +A + E E S +P C+ +E+
Sbjct: 514 RVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLE-SKGLSMMPACTWVEVGD 572
Query: 498 TFYQFLVGDR----SHPQSRELYSFLDEMTTKLKIAGYVPVFGXXXXXXXXXXXXXTALS 553
+ FL GDR + R++Y +DE+ ++ GY
Sbjct: 573 QTHSFLSGDRFDSYNETVKRQIYQKVDELMEEISEYGYSEEEQHLLPDVDEKEEERVG-R 631
Query: 554 VHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRVIIVRDRTRYHHFK 613
HSEKLAIA+GL+NT P++I +N R+C++CH+V +FIS V R ++VRD +R+HHFK
Sbjct: 632 YHSEKLAIAYGLVNTPEWNPLQITQNHRICKNCHKVVEFISLVTGREMVVRDASRFHHFK 691
Query: 614 DGICSCKDYW 623
+G CSC YW
Sbjct: 692 EGKCSCGGYW 701
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 103/232 (44%), Gaps = 9/232 (3%)
Query: 200 QAKELFDEMQEQDVVSWSTI-----IAGYVQVGCFMEALDFFHRM-LQVGPKPNEYTFVS 253
+ KE D++ + +S S + I V F EA + F + ++ K T+ +
Sbjct: 69 EVKESKDQILDDTQISKSGVTICSQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDA 128
Query: 254 ALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKR 313
+ AC L ++ K ++ F+ + + ++ I+ M+ KCG I A R+F + +R
Sbjct: 129 LVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLF-DEIPER 187
Query: 314 KVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYF 373
++ + ++I GF G EA ++F+ M E TF +L A + + GK
Sbjct: 188 NLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGK-QL 246
Query: 374 RLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVL 425
+ G++ ++D+ S+ G +++A MP VA W V+
Sbjct: 247 HVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVA-WNNVI 297
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 307 bits (786), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 195/620 (31%), Positives = 310/620 (50%), Gaps = 54/620 (8%)
Query: 10 KPFHSDHCCRLASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVADAS-LSYAH 68
KP S + L SLV+ +++ +Q HA ++ L S+ + + L A
Sbjct: 181 KPPSSMYTTLLKSLVNP-RALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAK 239
Query: 69 KLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGN 128
++FDQ+ ++ ++ + + D+L +F L + G+ + + F AC +
Sbjct: 240 RVFDQMAVKKPVACTGLMVGYTQAGRA-RDALKLFVDLVTE-GVEWDSFVFSVVLKACAS 297
Query: 129 GLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTM 188
+ G+Q+ + K+GL+S V V L+ Y K E + F+
Sbjct: 298 LEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQ------------- 344
Query: 189 IAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKP-N 247
E++E + VSWS II+GY Q+ F EA+ F + N
Sbjct: 345 ------------------EIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILN 386
Query: 248 EYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFW 307
+T+ S ACS L + G +H+ + + ++ +++I MY+KCG ++ A+ VF
Sbjct: 387 SFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVF- 445
Query: 308 EHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVE 367
E + W A I G A +G SEA+++F+KM + PN VTF+A+L ACSH +VE
Sbjct: 446 ESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVE 505
Query: 368 EGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNA 427
+GK M+ Y + P I+HY CM+D+ +R+GLL EA + +MP PD W L+
Sbjct: 506 QGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSG 565
Query: 428 CRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWND-ARMLREKSEISTATKK 486
C +K++E G G ++++DP +VL N+Y+ +G+W + A M++ +E KK
Sbjct: 566 CWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNE--RMLKK 623
Query: 487 IPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVFGXXXXXXXXXX 546
CS I+ G ++F+VGD+ HPQ++E+Y L E F
Sbjct: 624 ELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEFDG----------FMEGDMFQCNMT 673
Query: 547 XXXTALSVHSEKLAIAFGLLN---TAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRVIIV 603
L HSE+LAIAFGL++ AP PI++ KNLR C DCH+ K +S V I++
Sbjct: 674 ERREQLLDHSERLAIAFGLISVHGNAPA-PIKVFKNLRACPDCHEFAKHVSLVTGHEIVI 732
Query: 604 RDRTRYHHFKDGICSCKDYW 623
RD R+HHFK+G CSC DYW
Sbjct: 733 RDSRRFHHFKEGKCSCNDYW 752
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 174/399 (43%), Gaps = 51/399 (12%)
Query: 63 SLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFT 122
SL A KLFD++ + + TMI A++ + ++ +F + SG P +
Sbjct: 133 SLEDADKLFDEMSELNAVSRTTMISAYA-EQGILDKAVGLFSGMLA-SGDKPPSSMYTTL 190
Query: 123 FGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDL 182
+ N ++ G Q+ +H ++ GL SN + ++ MY K G W V
Sbjct: 191 LKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCG----------WLVG--- 237
Query: 183 YSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQV 242
AK +FD+M + V+ + ++ GY Q G +AL F ++
Sbjct: 238 ------------------AKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTE 279
Query: 243 GPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESA 302
G + + + F L AC++L L+ GK IH+ + + ++ + ++D Y KC ESA
Sbjct: 280 GVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESA 339
Query: 303 SRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSP-NKVTFVALLNACS 361
R F E V W+A+I G+ + EA+K F+ ++ +N S N T+ ++ ACS
Sbjct: 340 CRAFQEIREPNDV-SWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACS 398
Query: 362 H------GYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMA 415
G V + L+ S YG ++ + S+ G L +A ++ SM
Sbjct: 399 VLADCNIGGQVHADAIKRSLIGSQYG-------ESALITMYSKCGCLDDANEVFESMD-N 450
Query: 416 PDVAIWGAVLNACRIYKDMERGYRIGRIIKE--MDPNHV 452
PD+ W A ++ Y + R+ + M PN V
Sbjct: 451 PDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSV 489
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 115/242 (47%), Gaps = 3/242 (1%)
Query: 186 NTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPK 245
N ++ Y ++ A +LFDEM E + VS +T+I+ Y + G +A+ F ML G K
Sbjct: 122 NCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDK 181
Query: 246 PNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRV 305
P + + L + N ALD G+ IH+ + R + N + I++MY KCG + A RV
Sbjct: 182 PPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRV 241
Query: 306 FWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYM 365
F + K+ V M+ G+ G+ +A+K+F + E V + F +L AC+
Sbjct: 242 FDQMAVKKPVACTGLMV-GYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEE 300
Query: 366 VEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVL 425
+ GK V+ G+ E+ +VD + + A + DV+ W A++
Sbjct: 301 LNLGK-QIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVS-WSAII 358
Query: 426 NA 427
+
Sbjct: 359 SG 360
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 80/195 (41%), Gaps = 2/195 (1%)
Query: 231 EALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASII 290
EA +F M + G + Y++ AC L +L G+ +H + G + L ++
Sbjct: 66 EAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVL 125
Query: 291 DMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNK 350
MY +C +E A ++F E + V MI +A G +A+ +F M P
Sbjct: 126 QMYCECRSLEDADKLFDEMSELNAV-SRTTMISAYAEQGILDKAVGLFSGMLASGDKPPS 184
Query: 351 VTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMIS 410
+ LL + + ++ G+ V G+ +V++ + G L A+ +
Sbjct: 185 SMYTTLLKSLVNPRALDFGR-QIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFD 243
Query: 411 SMPMAPDVAIWGAVL 425
M + VA G ++
Sbjct: 244 QMAVKKPVACTGLMV 258
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 307 bits (786), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 177/569 (31%), Positives = 296/569 (52%), Gaps = 41/569 (7%)
Query: 64 LSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTF 123
++ A KLFD++ +P++ + ++I ++ ++L +F+ + D + PN Y+F F
Sbjct: 80 INTARKLFDEMCEPNVVSWTSVISGYN-DMGKPQNALSMFQKMHEDRPVPPNEYTFASVF 138
Query: 124 GACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLY 183
AC + G+ + + GL N+ V ++L+ MYGK VE R+VF+
Sbjct: 139 KACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFD-------- 190
Query: 184 SWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRM--LQ 241
+ +G G ++VVSW+++I Y Q EA++ F
Sbjct: 191 -------SMIGYG--------------RNVVSWTSMITAYAQNARGHEAIELFRSFNAAL 229
Query: 242 VGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIES 301
+ N++ S ++ACS+L L GK H + RG + N + S++DMYAKCG +
Sbjct: 230 TSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSC 289
Query: 302 ASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACS 361
A ++F V + +MI A HG A+K+F +M ++PN VT + +L+ACS
Sbjct: 290 AEKIFLRIRC-HSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACS 348
Query: 362 HGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPD--VA 419
H +V EG Y LM YG++P+ HY C+VD+L R G + EA ++ ++ + +
Sbjct: 349 HSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGAL 408
Query: 420 IWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSE 479
+WGA+L+A R++ +E + + + + ++ L N Y+ SG W D+ LR + +
Sbjct: 409 LWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMK 468
Query: 480 ISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGY-----VPV 534
S K+ CS IE + Y F GD S +S E+ FL ++ ++K G+ +
Sbjct: 469 RSGNVKE-RACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKERGHRGSSSMIT 527
Query: 535 FGXXXXXXXXXXXXXTALSVHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFIS 594
+S+H E+LA+A+GLL+ G+ IRI+ NLR+CRDCH+ K IS
Sbjct: 528 TSSSVFVDVDEEAKDEMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLIS 587
Query: 595 KVYDRVIIVRDRTRYHHFKDGICSCKDYW 623
++ +R I+VRD R+H FK+G C+C+DYW
Sbjct: 588 EIVEREIVVRDVNRFHCFKNGSCTCRDYW 616
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 151/298 (50%), Gaps = 25/298 (8%)
Query: 181 DLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRML 240
D ++ N ++ +YV ++ A++LFDEM E +VVSW+++I+GY +G AL F +M
Sbjct: 63 DTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMH 122
Query: 241 QVGP-KPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEI 299
+ P PNEYTF S ACS L GK IH+ + ++ N + +S++DMY KC ++
Sbjct: 123 EDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDV 182
Query: 300 ESASRVFWEH-NAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVS--PNKVTFVAL 356
E+A RVF R V W +MI +A + + EAI++F+ S N+ ++
Sbjct: 183 ETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASV 242
Query: 357 LNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDM-------- 408
++ACS ++ GK+ L V+ G ++D+ ++ G L AE +
Sbjct: 243 ISACSSLGRLQWGKVAHGL-VTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHS 301
Query: 409 -ISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSS 465
IS M A G A +++ +M G ++PN+V LLG +++ S
Sbjct: 302 VISYTSMIMAKAKHGLGEAAVKLFDEMVAG--------RINPNYV---TLLGVLHACS 348
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/353 (20%), Positives = 148/353 (41%), Gaps = 49/353 (13%)
Query: 20 LASLVDTCKSIQQI---KQTHAQLVTTALISHHVSANKFLKLVADAS-LSYAHKLFDQIP 75
AS+ C ++ + K HA+L + L + V ++ + + + + A ++FD +
Sbjct: 134 FASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMI 193
Query: 76 Q--PDLFIYNTMIKAHSLSPSSCNDSLMVFR----LLTRDSGLSPNRYSFVFTFGACGNG 129
++ + +MI A++ + ++++ +FR LT D N++ AC +
Sbjct: 194 GYGRNVVSWTSMITAYAQNARG-HEAIELFRSFNAALTSDRA---NQFMLASVISACSSL 249
Query: 130 LSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMI 189
+Q G+ + G +SN V +L+ MY K G + K+F + S+ +MI
Sbjct: 250 GRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMI 309
Query: 190 AAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEY 249
A G A +LFDEM +AG + PN
Sbjct: 310 MAKAKHGLGEAAVKLFDEM-----------VAGRIN--------------------PNYV 338
Query: 250 TFVSALAACSNLVALDQG-KWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRV--F 306
T + L ACS+ +++G +++ + + + R ++DM + G ++ A +
Sbjct: 339 TLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKT 398
Query: 307 WEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNA 359
E A++ W A++ +HG+ E + K +++ ++AL NA
Sbjct: 399 IEVGAEQGALLWGALLSAGRLHGRV-EIVSEASKRLIQSNQQVTSAYIALSNA 450
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 172/545 (31%), Positives = 300/545 (55%), Gaps = 37/545 (6%)
Query: 20 LASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIPQPD 78
L ++ C + + ++ A ++ T+L N+F+ L A Q+ +P+
Sbjct: 776 LKKIIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPN 835
Query: 79 LFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQV 138
+F+YN + K ++ S SL ++ + RDS +SP+ Y++ A + + + GE +
Sbjct: 836 VFVYNALFKGF-VTCSHPIRSLELYVRMLRDS-VSPSSYTYSSLVKA--SSFASRFGESL 891
Query: 139 RSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAY------ 192
++H K G +V + LI Y G + RKVF+ ++D +W TM++AY
Sbjct: 892 QAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDM 951
Query: 193 -------------------------VGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVG 227
+G GN+ QA+ LF++M +D++SW+T+I GY Q
Sbjct: 952 DSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNK 1011
Query: 228 CFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLA 287
+ EA+ F++M++ G P+E T + ++AC++L L+ GK +H + + ++ + +
Sbjct: 1012 RYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGS 1071
Query: 288 SIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVS 347
+++DMY+KCG +E A VF+ + K+ ++ WN++I G A HG EA+K+F KM++E+V
Sbjct: 1072 ALVDMYSKCGSLERALLVFF-NLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVK 1130
Query: 348 PNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAED 407
PN VTFV++ AC+H +V+EG+ +R M+ DY I+ +EHYG MV L S+AGL+ EA +
Sbjct: 1131 PNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALE 1190
Query: 408 MISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGR 467
+I +M P+ IWGA+L+ CRI+K++ + ++P + G + LL ++Y+ R
Sbjct: 1191 LIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNR 1250
Query: 468 WNDARMLREKSEISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLK 527
W D +R + K PG SSI ++ + F D+SH S E+ LDE+ ++
Sbjct: 1251 WRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMG 1310
Query: 528 IAGYV 532
+AGYV
Sbjct: 1311 LAGYV 1315
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 306 bits (784), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 161/483 (33%), Positives = 266/483 (55%), Gaps = 15/483 (3%)
Query: 152 FVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYS------WNTMIAAYVGSGNMSQAKELF 205
F + +L+ G++ G+++ + V + +++ YV G + A++ F
Sbjct: 211 FTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAF 270
Query: 206 DEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALD 265
D+++E+ ++SWS++I GY Q G F+EA+ F R+ ++ + + + S + ++ L
Sbjct: 271 DQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLR 330
Query: 266 QGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGF 325
QGK + + + + +L S++DMY KCG ++ A + F E K V W +I G+
Sbjct: 331 QGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLK-DVISWTVVITGY 389
Query: 326 AMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPE 385
HG +++++F +M N+ P++V ++A+L+ACSH M++EG+ F ++ +GI P
Sbjct: 390 GKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPR 449
Query: 386 IEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIK 445
+EHY C+VDLL RAG LKEA+ +I +MP+ P+V IW +L+ CR++ D+E G +G+I+
Sbjct: 450 VEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILL 509
Query: 446 EMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNGTFYQFLVG 505
+D + +V++ N+Y +G WN+ RE I KK G S +E+ + F G
Sbjct: 510 RIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIK-GLKKEAGMSWVEIEREVHFFRSG 568
Query: 506 DRSHPQSRELYSFLDEMTTKLKIA-GYVPVFGXXXXXXXXXXXXXTA-LSVHSEKLAIAF 563
+ SHP + + L E +L+ GY V+G L HSEKLAI
Sbjct: 569 EDSHPLTPVIQETLKEAERRLREELGY--VYGLKHELHDIDDESKEENLRAHSEKLAIGL 626
Query: 564 GLLN---TAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRVIIVRDRTRYHHFKDGICSCK 620
L G IR+ KNLRVC DCH+ K +SK+ +VRD R+H F+DG CSC
Sbjct: 627 ALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCG 686
Query: 621 DYW 623
DYW
Sbjct: 687 DYW 689
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 203/424 (47%), Gaps = 57/424 (13%)
Query: 67 AHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGAC 126
A+K+FD +P+ ++ ++ ++ H L+ SL +F + R G+ PN ++F AC
Sbjct: 60 AYKVFDSMPERNVVSWSALMSGHVLN-GDLKGSLSLFSEMGRQ-GIYPNEFTFSTNLKAC 117
Query: 127 GNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWN 186
G ++++G Q+ +K+G + V V N+L+ MY K G + KVF VD+ L SWN
Sbjct: 118 GLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWN 177
Query: 187 TMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKP 246
MIA +V +G S+A + F MQE + + +P
Sbjct: 178 AMIAGFVHAGYGSKALDTFGMMQEAN-----------------------------IKERP 208
Query: 247 NEYTFVSALAACSNLVALDQGKWIHSFIGRG--EIKMNERLLASIIDMYAKCGEIESASR 304
+E+T S L ACS+ + GK IH F+ R + + S++D+Y KCG + SA +
Sbjct: 209 DEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARK 268
Query: 305 VFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGY 364
F + ++ + W+++I G+A G+ EA+ +F++++ N + +++ +
Sbjct: 269 AF-DQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFA 327
Query: 365 MVEEGKLYFRLMVSDYGIIP---EIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIW 421
++ +GK L V +P E +VD+ + GL+ EAE + M + DV W
Sbjct: 328 LLRQGKQMQALAVK----LPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQL-KDVISW 382
Query: 422 GAVLNACRIYKDMERGYRIGRIIKEM-----DPNHVGCHVLLGNIYSSSGRWNDARMLRE 476
V+ Y G + RI EM +P+ V C++ + + S SG M++E
Sbjct: 383 TVVITG---YGKHGLGKKSVRIFYEMLRHNIEPDEV-CYLAVLSACSHSG------MIKE 432
Query: 477 KSEI 480
E+
Sbjct: 433 GEEL 436
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 125/240 (52%), Gaps = 7/240 (2%)
Query: 181 DLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRML 240
+L + N +I Y A ++FD M E++VVSWS +++G+V G +L F M
Sbjct: 40 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 99
Query: 241 QVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIE 300
+ G PNE+TF + L AC L AL++G IH F + +M + S++DMY+KCG I
Sbjct: 100 RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRIN 159
Query: 301 SASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVS--PNKVTFVALLN 358
A +VF R + WNAMI GF G S+A+ F M+ N+ P++ T +LL
Sbjct: 160 EAEKVF-RRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLK 218
Query: 359 ACSHGYMVEEGK-LYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLL---KEAEDMISSMPM 414
ACS M+ GK ++ L+ S + G +VDL + G L ++A D I M
Sbjct: 219 ACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTM 278
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 149/358 (41%), Gaps = 42/358 (11%)
Query: 20 LASLVDTCKSIQQI---KQTHAQLVTTAL---ISHHVSANKFLKLVADASLSYAHKLFDQ 73
L SL+ C S I KQ H LV + S ++ + V L A K FDQ
Sbjct: 213 LTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQ 272
Query: 74 IPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQ 133
I + + ++++I ++ + RL +S + + ++ G + ++
Sbjct: 273 IKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQI--DSFALSSIIGVFADFALLR 330
Query: 134 EGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYV 193
+G+Q+++ AVK+ V+N+++ MY K GLV+ K F KD+ SW
Sbjct: 331 QGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTV------ 384
Query: 194 GSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVS 253
+I GY + G +++ F+ ML+ +P+E +++
Sbjct: 385 -------------------------VITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLA 419
Query: 254 ALAACSNLVALDQGKWIHS-FIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAK 312
L+ACS+ + +G+ + S + IK A ++D+ + G ++ A + K
Sbjct: 420 VLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIK 479
Query: 313 RKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSH-GYMVEEG 369
V W ++ +HG E K K+ + + N +V + N GY E+G
Sbjct: 480 PNVGIWQTLLSLCRVHGDI-ELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQG 536
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 19/172 (11%)
Query: 246 PNE-YTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASR 304
PN+ VS L C+ DQG +H ++ + +N +IDMY KC E A +
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62
Query: 305 VFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGY 364
VF + +R V W+A++ G ++G ++ +F +M + + PN+ TF L AC
Sbjct: 63 VF-DSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLN 121
Query: 365 MVEEG--------KLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDM 408
+E+G K+ F +MV E +VD+ S+ G + EAE +
Sbjct: 122 ALEKGLQIHGFCLKIGFEMMV---------EVGNSLVDMYSKCGRINEAEKV 164
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 304 bits (779), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 164/468 (35%), Positives = 254/468 (54%), Gaps = 5/468 (1%)
Query: 59 VADASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYS 118
V L A +FD +P+ D+ +NTM+ ++ + +++L ++ R SG+ N +S
Sbjct: 124 VKSGMLVRARVVFDSMPERDVVSWNTMVIGYA-QDGNLHEALWFYKEFRR-SGIKFNEFS 181
Query: 119 FVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAV 178
F AC +Q Q + G SNV + ++I Y K G +E ++ F+
Sbjct: 182 FAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMT 241
Query: 179 DKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHR 238
KD++ W T+I+ Y G+M A++LF EM E++ VSW+ +IAGYV+ G ALD F +
Sbjct: 242 VKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRK 301
Query: 239 MLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGE 298
M+ +G KP ++TF S L A +++ +L GK IH ++ R ++ N +++S+IDMY+K G
Sbjct: 302 MIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGS 361
Query: 299 IESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLN 358
+E++ RVF + K WN MI A HG +A+++ M V PN+ T V +LN
Sbjct: 362 LEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILN 421
Query: 359 ACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDV 418
ACSH +VEEG +F M +GI+P+ EHY C++DLL RAG KE I MP PD
Sbjct: 422 ACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDK 481
Query: 419 AIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKS 478
IW A+L CRI+ + E G + + ++DP ++LL +IY+ G+W LR
Sbjct: 482 HIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVM 541
Query: 479 EISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSR--ELYSFLDEMTT 524
+ K+ S IE+ F V D SH +R E+Y L +
Sbjct: 542 KKRRVNKE-KAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNLAA 588
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 114/377 (30%), Positives = 173/377 (45%), Gaps = 41/377 (10%)
Query: 126 CGNGLSVQEGEQVRSHAVKVGLDS-NVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYS 184
CG+ S+++G+ + H G N + N LIGMY K G KVF+ ++LYS
Sbjct: 56 CGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYS 115
Query: 185 WNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGP 244
WN M++ YV SG + +A+ +FD M E+DVVSW+T++ GY Q G EAL F+ + G
Sbjct: 116 WNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGI 175
Query: 245 KPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASR 304
K NE++F L AC L + H + N L SIID YAKCG++ESA R
Sbjct: 176 KFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKR 235
Query: 305 VFWEHNAKR-KVW-----------------------------PWNAMIGGFAMHGKPSEA 334
F E K +W W A+I G+ G + A
Sbjct: 236 CFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRA 295
Query: 335 IKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVD 394
+ +F+KM V P + TF + L A + + GK M+ + P ++D
Sbjct: 296 LDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRT-NVRPNAIVISSLID 354
Query: 395 LLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEM-----DP 449
+ S++G L+ +E + D W +++A + G++ R++ +M P
Sbjct: 355 MYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHG---LGHKALRMLDDMIKFRVQP 411
Query: 450 NHVGCHVLLGNIYSSSG 466
N V+L N S SG
Sbjct: 412 NRTTLVVIL-NACSHSG 427
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 106/251 (42%), Gaps = 35/251 (13%)
Query: 231 EALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLAS-I 289
+A+ + Q G + S L C + +L QGKWIH + K LL++ +
Sbjct: 29 QAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHL 88
Query: 290 IDMYAKCGEIESASRVF------------------------------WEHNAKRKVWPWN 319
I MY KCG+ A +VF ++ +R V WN
Sbjct: 89 IGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWN 148
Query: 320 AMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGK-LYFRLMVS 378
M+ G+A G EA+ +++ + + N+ +F LL AC ++ + + +++V+
Sbjct: 149 TMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVA 208
Query: 379 DYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGY 438
G + + ++D ++ G ++ A+ M + D+ IW +++ DME
Sbjct: 209 --GFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTV-KDIHIWTTLISGYAKLGDMEAAE 265
Query: 439 RIGRIIKEMDP 449
++ + E +P
Sbjct: 266 KLFCEMPEKNP 276
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 303 bits (776), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 186/563 (33%), Positives = 299/563 (53%), Gaps = 50/563 (8%)
Query: 67 AHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGAC 126
A + D++ + D+ + +I +S +++ F+ + + + PN Y++ +C
Sbjct: 220 AKLVLDRVEEKDVVLITALIVGYSQKGED-TEAVKAFQSMLVEK-VQPNEYTYASVLISC 277
Query: 127 GNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWN 186
GN + G+ + VK G +S + +L+ MY + LV+ +VF+
Sbjct: 278 GNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKC---------- 327
Query: 187 TMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKP 246
++ + VSW+++I+G VQ G AL F +M++ KP
Sbjct: 328 ---------------------IEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKP 366
Query: 247 NEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVF 306
N +T SAL CSNL ++G+ IH + + ++ + +ID+Y KCG +R+
Sbjct: 367 NSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCG-CSDMARLV 425
Query: 307 WEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMV 366
++ ++ V N MI +A +G EA+ +F++M + PN VT +++L AC++ +V
Sbjct: 426 FDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLV 485
Query: 367 EEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLN 426
EEG F D I+ +HY CMVDLL RAG L+EAE M+++ + PD+ +W +L+
Sbjct: 486 EEGCELFDSFRKD-KIMLTNDHYACMVDLLGRAGRLEEAE-MLTTEVINPDLVLWRTLLS 543
Query: 427 ACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEI-STATK 485
AC++++ +E RI R I E++P G +L+ N+Y+S+G+WN R++ KS++ K
Sbjct: 544 ACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWN--RVIEMKSKMKDMKLK 601
Query: 486 KIPGCSSIELNGTFYQFLVGDR-SHPQSRELYSFLDEMTTKLKIAGYVP----VFGXXXX 540
K P S +E+N + F+ GD SHP S ++ L+E+ K K GYV VF
Sbjct: 602 KNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYVEDKSCVF----- 656
Query: 541 XXXXXXXXXTALSVHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRV 600
+L HSEKLAIAF + G+ IRI+KNLRVC DCH K +S+V R
Sbjct: 657 QDMEETAKERSLHQHSEKLAIAFAVWRNVGGS-IRILKNLRVCVDCHSWIKIVSRVMKRE 715
Query: 601 IIVRDRTRYHHFKDGICSCKDYW 623
II RD R+HHF+DG CSC DYW
Sbjct: 716 IICRDSKRFHHFRDGSCSCGDYW 738
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 141/518 (27%), Positives = 235/518 (45%), Gaps = 98/518 (18%)
Query: 5 CSTLTKPFHSDHCCRLASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVADASL 64
C TLT + R +D +SI IK A ++ + + +S +K + DASL
Sbjct: 59 CDTLTTTHNFSQLLR--QCIDE-RSISGIKTIQAHMLKSGFPAE-ISGSKLV----DASL 110
Query: 65 -----SYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSF 119
YA ++FD + + + +N++I A+ + +++ ++RL+ ++ L P+ Y+
Sbjct: 111 KCGDIDYARQVFDGMSERHIVTWNSLI-AYLIKHRRSKEAVEMYRLMITNNVL-PDEYTL 168
Query: 120 VFTFGACGNGLSVQEGEQVRSH--AVKVGLD-SNVFVVNALIGMYGKWGLVEYGRKVFEW 176
F A + LS+ E E RSH AV +GL+ SNVFV +AL+ MY K+G
Sbjct: 169 SSVFKAFSD-LSL-EKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFG----------- 215
Query: 177 AVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFF 236
+AK + D ++E+DVV + +I GY Q G EA+ F
Sbjct: 216 --------------------KTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAF 255
Query: 237 HRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKC 296
ML +PNEYT+ S L +C NL + GK IH + + + S++ MY +C
Sbjct: 256 QSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRC 315
Query: 297 GEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVAL 356
++ + RVF +V W ++I G +G+ A+ F+KM +++ PN T +
Sbjct: 316 SLVDDSLRVFKCIEYPNQV-SWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSA 374
Query: 357 LNACSHGYMVEEGKLYFRLMVSDYGIIPE-------IEHYG---------------CMVD 394
L CS+ M EEG+ +V+ YG + I+ YG VD
Sbjct: 375 LRGCSNLAMFEEGR-QIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVD 433
Query: 395 LLS---------RAGLLKEAEDMISSM---PMAPDVAIWGAVLNACRIYKDMERG----- 437
++S + G +EA D+ M + P+ +VL AC + +E G
Sbjct: 434 VISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFD 493
Query: 438 -YRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARML 474
+R +I+ + +H C V ++ +GR +A ML
Sbjct: 494 SFRKDKIM--LTNDHYACMV---DLLGRAGRLEEAEML 526
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 302 bits (774), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 194/641 (30%), Positives = 320/641 (49%), Gaps = 56/641 (8%)
Query: 28 KSIQQIKQTHAQLVTTALISHHVSANKFLKL-VADASLSYAHKLFDQIPQPDLFIYNTMI 86
++++ +K+ + ++ L++ ++ + +L DA++ K+ D+F + MI
Sbjct: 265 EAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMI 324
Query: 87 KAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVG 146
+ +L +FR + +G+ PN + + AC + +G +V S AVK+G
Sbjct: 325 SG-LIHNGMRYQALDMFRKMFL-AGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMG 382
Query: 147 LDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFD 206
+V V N+L+ MY K G +E RKVF+ +KD+Y+WN+MI Y +G +A ELF
Sbjct: 383 FIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFT 442
Query: 207 EMQEQD----VVSWSTIIAGYVQVGCFMEALDFFHRM--------------------LQV 242
MQ+ + +++W+T+I+GY++ G EA+D F RM +Q
Sbjct: 443 RMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQN 502
Query: 243 GPK----------------PNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLL 286
G K PN T +S L AC+NL+ + IH + R + +
Sbjct: 503 GKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVK 562
Query: 287 ASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENV 346
++ D YAK G+IE + +F K + WN++IGG+ +HG A+ +F +MK + +
Sbjct: 563 NALTDTYAKSGDIEYSRTIFLGMETK-DIITWNSLIGGYVLHGSYGPALALFNQMKTQGI 621
Query: 347 SPNKVTFVALLNACSHGYM--VEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKE 404
+PN+ T +++ A HG M V+EGK F + +DY IIP +EH MV L RA L+E
Sbjct: 622 TPNRGTLSSIILA--HGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEE 679
Query: 405 AEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSS 464
A I M + + IW + L CRI+ D++ + ++P + ++ IY+
Sbjct: 680 ALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYAL 739
Query: 465 SGRWNDARMLREKSEISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTT 524
+ + + K KK G S IE+ + F GD+S + LY +++M+
Sbjct: 740 GAKLGRS-LEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQSKLCTDVLYPLVEKMS- 797
Query: 525 KLKIAGYVPVFGXXXXXXXXXXXXXTALSVHSEKLAIAFGLLNT--APGTPIRIVKNLRV 582
++ + +HSEK A+AFGL+++ A T IRI+KNLR+
Sbjct: 798 --RLDNRSDQYNGELWIEEEGREETCG--IHSEKFAMAFGLISSSGASKTTIRILKNLRM 853
Query: 583 CRDCHQVTKFISKVYDRVIIVRDRTRYHHFKDGICSCKDYW 623
CRDCH K++SK Y I++ D HHFK+G CSCKDYW
Sbjct: 854 CRDCHDTAKYVSKRYGCDILLEDTRCLHHFKNGDCSCKDYW 894
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 118/484 (24%), Positives = 224/484 (46%), Gaps = 73/484 (15%)
Query: 15 DHCCRLASLVDTCKSIQQIKQ--------THAQLVTTALISHHVS--------------- 51
D+ CR SL++ K++ + Q T+ +L+ + + S +
Sbjct: 54 DYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARFGLFTEP 113
Query: 52 ----ANKFLKLVADAS-LSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLL 106
K L + A ++ A K+FD + + +LF ++ MI A+S + + +FRL+
Sbjct: 114 DVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYS-RENRWREVAKLFRLM 172
Query: 107 TRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGL 166
+D G+ P+ + F C N V+ G+ + S +K+G+ S + V N+++ +Y K G
Sbjct: 173 MKD-GVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGE 231
Query: 167 VEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQ--------------- 211
+++ K F ++D+ +WN+++ AY +G +A EL EM+++
Sbjct: 232 LDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGG 291
Query: 212 ------------------------DVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPN 247
DV +W+ +I+G + G +ALD F +M G PN
Sbjct: 292 YNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPN 351
Query: 248 EYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFW 307
T +SA++ACS L ++QG +HS + + + S++DMY+KCG++E A +VF
Sbjct: 352 AVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVF- 410
Query: 308 EHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVE 367
+ + V+ WN+MI G+ G +A ++F +M+ N+ PN +T+ +++
Sbjct: 411 DSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEG 470
Query: 368 EGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMA---PDVAIWGAV 424
E F+ M D + + ++ + G EA ++ M + P+ ++
Sbjct: 471 EAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSL 530
Query: 425 LNAC 428
L AC
Sbjct: 531 LPAC 534
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 163/317 (51%), Gaps = 13/317 (4%)
Query: 165 GLVEYGRKV---FEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIA 221
G + GR + F + D++ +++ Y G ++ A+++FD M+E+++ +WS +I
Sbjct: 95 GSIHLGRILHARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIG 154
Query: 222 GYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKM 281
Y + + E F M++ G P+++ F L C+N ++ GK IHS + + +
Sbjct: 155 AYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSS 214
Query: 282 NERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKM 341
R+ SI+ +YAKCGE++ A++ F+ +R V WN+++ + +GK EA+++ ++M
Sbjct: 215 CLRVSNSILAVYAKCGELDFATK-FFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEM 273
Query: 342 KVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGL 401
+ E +SP VT+ L+ + + + M + +GI ++ + M+ L G+
Sbjct: 274 EKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMET-FGITADVFTWTAMISGLIHNGM 332
Query: 402 LKEAEDMISSMPMA---PDVAIWGAVLNACRIYKDMERGYRIGRIIKEM---DPNHVGCH 455
+A DM M +A P+ + ++AC K + +G + I +M D VG
Sbjct: 333 RYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNS 392
Query: 456 VLLGNIYSSSGRWNDAR 472
++ ++YS G+ DAR
Sbjct: 393 LV--DMYSKCGKLEDAR 407
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 300 bits (768), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 183/567 (32%), Positives = 298/567 (52%), Gaps = 46/567 (8%)
Query: 64 LSYAHKLFDQIPQPDLF---IYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFV 120
L A K+FD + L ++ M +S + S D+L+V+ + S + P +S
Sbjct: 183 LDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSP-RDALIVYVDMLC-SFIEPGNFSIS 240
Query: 121 FTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDK 180
AC + ++ G + + VK RK VD+
Sbjct: 241 VALKACVDLKDLRVGRGIHAQIVK--------------------------RKE---KVDQ 271
Query: 181 DLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRML 240
+Y N ++ Y+ SG A+++FD M E++VV+W+++I+ + E + F +M
Sbjct: 272 VVY--NVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQ 329
Query: 241 QVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIE 300
+ + T + L ACS + AL GK IH+ I + + K + LL S++DMY KCGE+E
Sbjct: 330 EEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVE 389
Query: 301 SASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNAC 360
+ RVF + + + WN M+ +A++G E I +F+ M V+P+ +TFVALL+ C
Sbjct: 390 YSRRVF-DVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGC 448
Query: 361 SHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAI 420
S + E G F M +++ + P +EHY C+VD+L RAG +KEA +I +MP P +I
Sbjct: 449 SDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASI 508
Query: 421 WGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEI 480
WG++LN+CR++ ++ G + + ++P++ G +V++ NIY+ + W++ +RE +
Sbjct: 509 WGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMK- 567
Query: 481 STATKKIPGCSSIELNGTFYQFLVGD----RSHPQSRELYSFLDEMTTKLKIAGYVPVFG 536
KK GCS +++ F+ G R+ + +++++ L E K +GY P
Sbjct: 568 QRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQEAIEK---SGYSPNTS 624
Query: 537 XXXXXXXXXXXXXTALSVHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKV 596
HSE+LA + L++T G PIRI KNLRVC DCH K +S+V
Sbjct: 625 VVLHDVDEETKANWVCG-HSERLATTYSLIHTGEGVPIRITKNLRVCADCHSWMKIVSQV 683
Query: 597 YDRVIIVRDRTRYHHFKDGICSCKDYW 623
RVI++RD R+HHF DGICSCKDYW
Sbjct: 684 TRRVIVLRDTKRFHHFVDGICSCKDYW 710
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 144/316 (45%), Gaps = 38/316 (12%)
Query: 20 LASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVADASL-SYAHKLFDQIPQPD 78
L + VD K ++ + HAQ+V V N LKL ++ L A K+FD + + +
Sbjct: 243 LKACVD-LKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERN 301
Query: 79 LFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQV 138
+ +N++I S ++ +FR + ++ + + + AC ++ G+++
Sbjct: 302 VVTWNSLISVLS-KKVRVHEMFNLFRKM-QEEMIGFSWATLTTILPACSRVAALLTGKEI 359
Query: 139 RSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNM 198
+ +K +V ++N+L+ MYGK G VEY R+VF+ + KDL SWN M+ Y +GN+
Sbjct: 360 HAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNI 419
Query: 199 SQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAAC 258
E ++ F M++ G P+ TFV+ L+ C
Sbjct: 420 E-------------------------------EVINLFEWMIESGVAPDGITFVALLSGC 448
Query: 259 SNLVALDQGKWIHSFIGRGEIKMNERL--LASIIDMYAKCGEIESASRVFWEHNAKRKVW 316
S+ + G + + + E +++ L A ++D+ + G+I+ A +V K
Sbjct: 449 SDTGLTEYGLSLFERM-KTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSAS 507
Query: 317 PWNAMIGGFAMHGKPS 332
W +++ +HG S
Sbjct: 508 IWGSLLNSCRLHGNVS 523
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 296 bits (758), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 185/558 (33%), Positives = 290/558 (51%), Gaps = 76/558 (13%)
Query: 45 LISHHVSAN-----KFLKLVADA-SLSYAHKLFDQIPQ-PDLFIYNTMIKAHSLSPSSCN 97
++ H + N KFL + A A + YA KLFDQ PQ D F+ N+MIKA+ L
Sbjct: 1 MLRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAY-LETRQYP 59
Query: 98 DSLMVFR----------------LLTRDSGLSPNRY------SFVFTFGACGNGLSVQEG 135
DS ++R LT+ LS Y S ++ FG C +
Sbjct: 60 DSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGV 119
Query: 136 EQVRSHAVKVGLDSNVF-----------------------------------------VV 154
+ + K+G N F +
Sbjct: 120 VDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIY 179
Query: 155 NALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVV 214
NA++ + K G + R++F+ K + +W TMI Y ++ A++LFD M E+++V
Sbjct: 180 NAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLV 239
Query: 215 SWSTIIAGYVQVGCFMEALDFFHRMLQVGP-KPNEYTFVSALAACSNLVALDQGKWIHSF 273
SW+T+I GY Q E + F M P++ T +S L A S+ AL G+W H F
Sbjct: 240 SWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCF 299
Query: 274 IGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSE 333
+ R ++ ++ +I+DMY+KCGEIE A R+F + +++V WNAMI G+A++G
Sbjct: 300 VQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIF-DEMPEKQVASWNAMIHGYALNGNARA 358
Query: 334 AIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMV 393
A+ +F M +E P+++T +A++ AC+HG +VEEG+ +F +M + G+ +IEHYGCMV
Sbjct: 359 ALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHVM-REMGLNAKIEHYGCMV 416
Query: 394 DLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVG 453
DLL RAG LKEAED+I++MP P+ I + L+AC YKD+ER RI + E++P + G
Sbjct: 417 DLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDG 476
Query: 454 CHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSR 513
+VLL N+Y++ RW+D M++ + A K++ GCS IE+N +F+ GD +HP R
Sbjct: 477 NYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEV-GCSLIEINYIVSEFISGDTTHPHRR 535
Query: 514 ELYSFLDEMTTKLKIAGY 531
++ L ++ + Y
Sbjct: 536 SIHLVLGDLLMHMNEEKY 553
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 295 bits (754), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 168/513 (32%), Positives = 287/513 (55%), Gaps = 12/513 (2%)
Query: 23 LVDTCKSIQQIKQTHAQLVTTALIS-HHVSANKFLKLVAD-ASLSYAHKLFDQIPQPDLF 80
L+ + ++KQ H ++ + +S + N +K + + A K+F ++P PD+
Sbjct: 139 LMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVS 198
Query: 81 IYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRS 140
+N MI ++ S + F++++ G+ P+ Y+ + CG+ ++ G+ V
Sbjct: 199 SFNVMIVGYAKQGFSLEALKLYFKMVS--DGIEPDEYTVLSLLVCCGHLSDIRLGKGVHG 256
Query: 141 HAVKVG--LDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNM 198
+ G SN+ + NAL+ MY K ++ F+ KD+ SWNTM+ +V G+M
Sbjct: 257 WIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDM 316
Query: 199 SQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEAL-DFFHRMLQVGP-KPNEYTFVSALA 256
A+ +FD+M ++D+VSW++++ GY + GC + + F+ M V KP+ T VS ++
Sbjct: 317 EAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLIS 376
Query: 257 ACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVW 316
+N L G+W+H + R ++K + L +++IDMY KCG IE A VF + ++ V
Sbjct: 377 GAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVF-KTATEKDVA 435
Query: 317 PWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLM 376
W +MI G A HG +A+++F +M+ E V+PN VT +A+L ACSH +VEEG F M
Sbjct: 436 LWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHM 495
Query: 377 VSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMIS-SMPMAPDVAIWGAVLNACRIYKDME 435
+G PE EHYG +VDLL RAG ++EA+D++ MPM P ++WG++L+ACR +D+E
Sbjct: 496 KDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIE 555
Query: 436 RGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIEL 495
+ +++P G +VLL NIY++ GRW + RE E + KK G SS+
Sbjct: 556 TAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAME-NRGVKKTAGYSSVVG 614
Query: 496 NGTFYQFLVGDR-SHPQSRELYSFLDEMTTKLK 527
++F+ ++ +HP+ E+ L + ++K
Sbjct: 615 VEGLHRFVAAEKQNHPRWTEIKRILQHLYNEMK 647
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 122/475 (25%), Positives = 215/475 (45%), Gaps = 89/475 (18%)
Query: 23 LVDTCKSIQQIKQTHAQLVTTALISHHVSANK---FLKLVADASLSYAHKLF-DQIPQPD 78
L++ C S Q KQ AQ++ LI ++ F + +L A LF + P P+
Sbjct: 40 LLENCNSRNQFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLLFLNFTPNPN 99
Query: 79 LFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQV 138
+F+YNTMI A S SS N+ ++ + R +SP+R +F++ A + E +Q+
Sbjct: 100 VFVYNTMISAVS---SSKNECFGLYSSMIRHR-VSPDRQTFLYLMKASS---FLSEVKQI 152
Query: 139 RSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNM 198
H + G S +G Y WN+++ Y+ GN
Sbjct: 153 HCHIIVSGCLS--------LGN----------------------YLWNSLVKFYMELGNF 182
Query: 199 SQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAAC 258
A+++F M DV S++ +I GY + G +EAL + +M+ G +P+EYT +S L C
Sbjct: 183 GVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCC 242
Query: 259 SNLVALDQGKWIHSFIG-RGEIKMNERLLA-SIIDMYAKCGEIESASRVFWEHNAKRKVW 316
+L + GK +H +I RG + + +L+ +++DMY KC E A R F + K+ +
Sbjct: 243 GHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAF-DAMKKKDMR 301
Query: 317 PWNAMIGGFAMHGKPSEAIKVFQKMK---------------------------------V 343
WN M+ GF G A VF +M V
Sbjct: 302 SWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIV 361
Query: 344 ENVSPNKVTFVALLNACSHGYMVEEGK----LYFRLMVSDYGIIPEIEHYGCMVDLLSRA 399
E V P++VT V+L++ ++ + G+ L RL + + ++D+ +
Sbjct: 362 EKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLS-----SALIDMYCKC 416
Query: 400 GLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRI-GRIIKE-MDPNHV 452
G+++ A M+ DVA+W +++ + + ++ ++ GR+ +E + PN+V
Sbjct: 417 GIIERA-FMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNV 470
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 295 bits (754), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 184/536 (34%), Positives = 275/536 (51%), Gaps = 48/536 (8%)
Query: 19 RLASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFL---KLVADASLSYAHKLFDQIP 75
R L CK+I+ +KQ HA +V L+S+ + + L +L YAHKLFD+IP
Sbjct: 14 RRPKLWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIP 73
Query: 76 QPDLFIYNTMIK--AHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQ 133
+PD+ I N +++ A S+ P ++ ++ + + G+SP+RY+F F AC
Sbjct: 74 KPDVSICNHVLRGSAQSMKPEK---TVSLYTEMEK-RGVSPDRYTFTFVLKACSKLEWRS 129
Query: 134 EGEQVRSHAVKVGLDSNVFVVNALI-------------------------------GMYG 162
G V+ G N +V NALI Y
Sbjct: 130 NGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYA 189
Query: 163 KWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAG 222
K G ++ ++F+ KD +WN MI + M A+ELFD E+DVV+W+ +I+G
Sbjct: 190 KRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISG 249
Query: 223 YVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGR-----G 277
YV G EAL F M G P+ T +S L+AC+ L L+ GK +H +I
Sbjct: 250 YVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSS 309
Query: 278 EIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKV 337
I + + ++IDMYAKCG I+ A VF R + WN +I G A+H +I++
Sbjct: 310 SIYVGTPIWNALIDMYAKCGSIDRAIEVF-RGVKDRDLSTWNTLIVGLALH-HAEGSIEM 367
Query: 338 FQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLS 397
F++M+ V PN+VTF+ ++ ACSH V+EG+ YF LM Y I P I+HYGCMVD+L
Sbjct: 368 FEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLG 427
Query: 398 RAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVL 457
RAG L+EA + SM + P+ +W +L AC+IY ++E G + M + G +VL
Sbjct: 428 RAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVL 487
Query: 458 LGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSR 513
L NIY+S+G+W+ + +R+ + T KK G S IE + S P+SR
Sbjct: 488 LSNIYASTGQWDGVQKVRKMFD-DTRVKKPTGVSLIEEDDDKLMMRYLLSSEPESR 542
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 159/454 (35%), Positives = 256/454 (56%), Gaps = 8/454 (1%)
Query: 27 CKSIQQIKQTHAQLVTTALISHHVSANKFLKLVADASLSYAHKLFDQIPQPDLFIYNTMI 86
C ++ ++ ++ L++ +V N + K + A +LFDQI + D+ + TMI
Sbjct: 221 CLCLKDARKLFDEMPERNLVTWNVMLNGYSKA---GLIEQAEELFDQITEKDIVSWGTMI 277
Query: 87 KAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVG 146
L + +++L+ + + R G+ P+ V A + +G Q+ VK G
Sbjct: 278 DG-CLRKNQLDEALVYYTEMLR-CGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRG 335
Query: 147 LDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFD 206
D F+ +I Y ++ + FE +V + S N +IA +V +G + QA+E+FD
Sbjct: 336 FDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFD 395
Query: 207 EMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGP-KPNEYTFVSALAACSNLVALD 265
+ ++D+ SW+ +I+GY Q AL F M+ KP+ T VS +A S+L +L+
Sbjct: 396 QTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLE 455
Query: 266 QGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHN--AKRKVWPWNAMIG 323
+GK H ++ I N+ L A+IIDMYAKCG IE+A +F + + + PWNA+I
Sbjct: 456 EGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIIC 515
Query: 324 GFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGII 383
G A HG A+ ++ ++ + PN +TFV +L+AC H +VE GK YF M SD+GI
Sbjct: 516 GSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIE 575
Query: 384 PEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRI 443
P+I+HYGCMVDLL +AG L+EA++MI MP+ DV IWG +L+A R + ++E
Sbjct: 576 PDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATE 635
Query: 444 IKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREK 477
+ +DP+H GC V+L N+Y+ +GRW D ++RE+
Sbjct: 636 LAAIDPSHGGCKVMLSNVYADAGRWEDVALVREE 669
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 124/486 (25%), Positives = 223/486 (45%), Gaps = 83/486 (17%)
Query: 67 AHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGAC 126
A KLFD +P+ Y T+IK ++ + ++++ +FR + R+ G+ N + AC
Sbjct: 126 ALKLFDVMPERSCVSYTTLIKGYA-QNNQWSEAMELFREM-RNLGIMLNEVTLATVISAC 183
Query: 127 GNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWN 186
+ + + ++S A+K+ L+ VFV L+ MY ++ RK+F+ +++L +WN
Sbjct: 184 SHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWN 243
Query: 187 TMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKP 246
M+ Y +G + QA+ELFD++ E+D+VSW T+I G ++ EAL ++ ML+ G KP
Sbjct: 244 VMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKP 303
Query: 247 NEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYA------------ 294
+E V L+A + V +G +H I + + L A+II YA
Sbjct: 304 SEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQF 363
Query: 295 -------------------KCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAI 335
K G +E A VF + + ++ WNAMI G+A P A+
Sbjct: 364 EASVKDHIASRNALIAGFVKNGMVEQAREVF-DQTHDKDIFSWNAMISGYAQSLSPQLAL 422
Query: 336 KVFQKM-KVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHY-GCMV 393
+F++M V P+ +T V++ +A S +EEGK + ++ IP ++ ++
Sbjct: 423 HLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYL--NFSTIPPNDNLTAAII 480
Query: 394 DLLSRAGLLKEAEDM-------------------------------------ISSMPMAP 416
D+ ++ G ++ A ++ + S+P+ P
Sbjct: 481 DMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKP 540
Query: 417 DVAIWGAVLNACRIYKDMERGYRIGRIIK-----EMDPNHVGCHVLLGNIYSSSGRWNDA 471
+ + VL+AC +E G +K E D H GC V ++ +GR +A
Sbjct: 541 NSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMV---DLLGKAGRLEEA 597
Query: 472 RMLREK 477
+ + +K
Sbjct: 598 KEMIKK 603
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 149/288 (51%), Gaps = 15/288 (5%)
Query: 113 SPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRK 172
S + V G+C + V G Q+ +K GLDSN ++ N+++ MY K L+
Sbjct: 38 SDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAES 97
Query: 173 VFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEA 232
VF D S+N M+ YV S + A +LFD M E+ VS++T+I GY Q + EA
Sbjct: 98 VFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEA 157
Query: 233 LDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLAS--II 290
++ F M +G NE T + ++ACS+L + + + S + +K+ R+ S ++
Sbjct: 158 MELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIK--LKLEGRVFVSTNLL 215
Query: 291 DMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNK 350
MY C ++ A ++F + +R + WN M+ G++ G +A ++F ++ +++
Sbjct: 216 HMYCLCLCLKDARKLF-DEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDI---- 270
Query: 351 VTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIP-EIEHYGCMVDLLS 397
V++ +++ C ++E +Y+ M+ G+ P E+ MVDLLS
Sbjct: 271 VSWGTMIDGCLRKNQLDEALVYYTEMLR-CGMKPSEV----MMVDLLS 313
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 160/519 (30%), Positives = 291/519 (56%), Gaps = 15/519 (2%)
Query: 20 LASLVDTCKSIQQIK---QTHAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIP 75
AS++ C + + Q H+ + + +S + + + + +++ A ++FD++
Sbjct: 155 FASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMG 214
Query: 76 QPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEG 135
++ +N++I + + ++L VF+++ +S + P+ + AC + +++ G
Sbjct: 215 DRNVVSWNSLITCFEQNGPAV-EALDVFQMML-ESRVEPDEVTLASVISACASLSAIKVG 272
Query: 136 EQVRSHAVKVG-LDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVG 194
++V VK L +++ + NA + MY K ++ R +F+ +++ + +MI+ Y
Sbjct: 273 QEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAM 332
Query: 195 SGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSA 254
+ + A+ +F +M E++VVSW+ +IAGY Q G EAL F + + P Y+F +
Sbjct: 333 AASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANI 392
Query: 255 LAACSNLVALDQGKWIHSFIGRGEIKMNER------LLASIIDMYAKCGEIESASRVFWE 308
L AC++L L G H + + K + S+IDMY KCG +E VF +
Sbjct: 393 LKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRK 452
Query: 309 HNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEE 368
+R WNAMI GFA +G +EA+++F++M P+ +T + +L+AC H VEE
Sbjct: 453 M-MERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEE 511
Query: 369 GKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNAC 428
G+ YF M D+G+ P +HY CMVDLL RAG L+EA+ MI MPM PD IWG++L AC
Sbjct: 512 GRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAAC 571
Query: 429 RIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIP 488
++++++ G + + E++P++ G +VLL N+Y+ G+W D +R+ TK+ P
Sbjct: 572 KVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQ-P 630
Query: 489 GCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLK 527
GCS I++ G + F+V D+SHP+ ++++S LD + +++
Sbjct: 631 GCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMR 669
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/282 (31%), Positives = 157/282 (55%), Gaps = 1/282 (0%)
Query: 138 VRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGN 197
V + +K G + +F+ N LI Y K G +E GR+VF+ +++Y+WN+++ G
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 198 MSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAA 257
+ +A LF M E+D +W+++++G+ Q EAL +F M + G NEY+F S L+A
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 258 CSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWP 317
CS L +++G +HS I + + + ++++DMY+KCG + A RVF E R V
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEM-GDRNVVS 220
Query: 318 WNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMV 377
WN++I F +G EA+ VFQ M V P++VT ++++AC+ ++ G+ +V
Sbjct: 221 WNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVV 280
Query: 378 SDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVA 419
+ + +I VD+ ++ +KEA + SMP+ +A
Sbjct: 281 KNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIA 322
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 169/374 (45%), Gaps = 67/374 (17%)
Query: 19 RLASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVADASLSYAHKLFDQIPQPD 78
RL C S++ +Q ++ + + + KL L A LF +P+ D
Sbjct: 60 RLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL---GFLDEADSLFRSMPERD 116
Query: 79 LFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQV 138
+N+M+ + C ++L F ++ ++ G N YSF AC + +G QV
Sbjct: 117 QCTWNSMVSGFA-QHDRCEEALCYFAMMHKE-GFVLNEYSFASVLSACSGLNDMNKGVQV 174
Query: 139 RSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNM 198
S K S+V++ +AL+ MY K G V ++VF+ D+++ SWN++I +
Sbjct: 175 HSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCF------ 228
Query: 199 SQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAAC 258
EQ+ G +EALD F ML+ +P+E T S ++AC
Sbjct: 229 -----------EQN--------------GPAVEALDVFQMMLESRVEPDEVTLASVISAC 263
Query: 259 SNLVALDQGKWIHSFIGRGEIKMNERLLA-SIIDMYAKCGEIES---------------- 301
++L A+ G+ +H + + + N+ +L+ + +DMYAKC I+
Sbjct: 264 ASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAE 323
Query: 302 --------------ASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVS 347
A+R+ + A+R V WNA+I G+ +G+ EA+ +F +K E+V
Sbjct: 324 TSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVC 383
Query: 348 PNKVTFVALLNACS 361
P +F +L AC+
Sbjct: 384 PTHYSFANILKACA 397
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 285 bits (730), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 156/466 (33%), Positives = 269/466 (57%), Gaps = 17/466 (3%)
Query: 63 SLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFT 122
+L+ A ++FD++ + D +N +I AH + ++L +F + R S + P+ ++F
Sbjct: 432 ALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKG-YETLFLFVSMLR-SRIEPDEFTFGSI 489
Query: 123 FGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDL 182
AC G S+ G ++ S VK G+ SN V +LI MY K G++E K+ +
Sbjct: 490 LKACTGG-SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQR-- 546
Query: 183 YSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQV 242
A V SG M + +++ ++ ++ VSW++II+GYV +A F RM+++
Sbjct: 547 --------ANV-SGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEM 597
Query: 243 GPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESA 302
G P+++T+ + L C+NL + GK IH+ + + E++ + + ++++DMY+KCG++
Sbjct: 598 GITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHD- 656
Query: 303 SRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSH 362
SR+ +E + +R WNAMI G+A HGK EAI++F++M +EN+ PN VTF+++L AC+H
Sbjct: 657 SRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAH 716
Query: 363 GYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWG 422
++++G YF +M DYG+ P++ HY MVD+L ++G +K A ++I MP D IW
Sbjct: 717 MGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWR 776
Query: 423 AVLNACRIYK-DMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEIS 481
+L C I++ ++E + +DP + LL N+Y+ +G W LR
Sbjct: 777 TLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMR-G 835
Query: 482 TATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLK 527
KK PGCS +EL + FLVGD++HP+ E+Y L + +++K
Sbjct: 836 FKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMK 881
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/457 (26%), Positives = 203/457 (44%), Gaps = 61/457 (13%)
Query: 21 ASLVDTCKSIQQIK---QTHAQLVTTALISHHVSANKFLKLVADA-SLSYAHKLFDQIPQ 76
AS++ +C ++ +++ Q HA + + + + L + A ++ A LFD
Sbjct: 285 ASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSEN 344
Query: 77 PDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGE 136
+ YN MI +S L+ RL++ SGL + S F AC + EG
Sbjct: 345 LNRQSYNAMITGYSQEEHGFKALLLFHRLMS--SGLGFDEISLSGVFRACALVKGLSEGL 402
Query: 137 QVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSG 196
Q+ A+K L +V V NA I MYGK
Sbjct: 403 QIYGLAIKSSLSLDVCVANAAIDMYGK-------------------------------CQ 431
Query: 197 NMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALA 256
+++A +FDEM+ +D VSW+ IIA + Q G E L F ML+ +P+E+TF S L
Sbjct: 432 ALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILK 491
Query: 257 ACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRV---FWE----- 308
AC+ +L G IHS I + + N + S+IDMY+KCG IE A ++ F++
Sbjct: 492 ACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVS 550
Query: 309 ---------HNAKRKVW--PWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALL 357
HN + + WN++I G+ M + +A +F +M ++P+K T+ +L
Sbjct: 551 GTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVL 610
Query: 358 NACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPD 417
+ C++ GK V + ++ +VD+ S+ G L ++ M + D
Sbjct: 611 DTCANLASAGLGK-QIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEK-SLRRD 668
Query: 418 VAIWGAVLNACRIYKDMERGYRIGR--IIKEMDPNHV 452
W A++ + E ++ I++ + PNHV
Sbjct: 669 FVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHV 705
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 129/257 (50%), Gaps = 3/257 (1%)
Query: 105 LLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKW 164
L + + +S +SFVF C +++ G+Q +H + G FV+N L+ +Y
Sbjct: 39 FLNQVNSVSTTNFSFVFK--ECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNS 96
Query: 165 GLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYV 224
VF+ +D+ SWN MI Y S +M +A F+ M +DVVSW+++++GY+
Sbjct: 97 RDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYL 156
Query: 225 QVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNER 284
Q G +++++ F M + G + + TF L CS L G IH + R +
Sbjct: 157 QNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVV 216
Query: 285 LLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVE 344
++++DMYAK + RVF K V W+A+I G + S A+K F++M+
Sbjct: 217 AASALLDMYAKGKRFVESLRVFQGIPEKNSV-SWSAIIAGCVQNNLLSLALKFFKEMQKV 275
Query: 345 NVSPNKVTFVALLNACS 361
N ++ + ++L +C+
Sbjct: 276 NAGVSQSIYASVLRSCA 292
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 157/361 (43%), Gaps = 36/361 (9%)
Query: 67 AHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGAC 126
A+ F+ +P D+ +N+M+ + L S+ VF + R+ G+ + +F C
Sbjct: 133 ANSFFNMMPVRDVVSWNSMLSGY-LQNGESLKSIEVFVDMGRE-GIEFDGRTFAIILKVC 190
Query: 127 GNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWN 186
G Q+ V+VG D++V +AL+ MY K G++ E
Sbjct: 191 SFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAK------GKRFVE----------- 233
Query: 187 TMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKP 246
+ +F + E++ VSWS IIAG VQ AL FF M +V
Sbjct: 234 --------------SLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGV 279
Query: 247 NEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVF 306
++ + S L +C+ L L G +H+ + + + + + +DMYAKC ++ A ++
Sbjct: 280 SQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDA-QIL 338
Query: 307 WEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMV 366
++++ +NAMI G++ +A+ +F ++ + ++++ + AC+ +
Sbjct: 339 FDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGL 398
Query: 367 EEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLN 426
EG + L + + ++ +D+ + L EA + M D W A++
Sbjct: 399 SEGLQIYGLAIKS-SLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIA 456
Query: 427 A 427
A
Sbjct: 457 A 457
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 285 bits (730), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 167/498 (33%), Positives = 267/498 (53%), Gaps = 40/498 (8%)
Query: 35 QTHAQLVTTALISHHVSANKFLKLVADASL-SYAHKLFDQIPQPDLFIYNTMIKAHSLSP 93
Q HA +V L S N + + + L +A +LFD D+ + MI +
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNG 183
Query: 94 SSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVG-LDSNVF 152
S+ MV+ + + +G++ N + V A G V+ G V ++ G + +VF
Sbjct: 184 SA--SEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVF 241
Query: 153 VVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQD 212
+ ++L+ MYGK + A+++FDEM ++
Sbjct: 242 IGSSLVDMYGKCSCYD-------------------------------DAQKVFDEMPSRN 270
Query: 213 VVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHS 272
VV+W+ +IAGYVQ CF + + F ML+ PNE T S L+AC+++ AL +G+ +H
Sbjct: 271 VVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHC 330
Query: 273 FIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPS 332
++ + I++N ++ID+Y KCG +E A VF E ++ V+ W AMI GFA HG
Sbjct: 331 YMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVF-ERLHEKNVYTWTAMINGFAAHGYAR 389
Query: 333 EAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCM 392
+A +F M +VSPN+VTF+A+L+AC+HG +VEEG+ F M + + P+ +HY CM
Sbjct: 390 DAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACM 449
Query: 393 VDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERG-YRIGRIIKEMDPNH 451
VDL R GLL+EA+ +I MPM P +WGA+ +C ++KD E G Y R+IK + P+H
Sbjct: 450 VDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIK-LQPSH 508
Query: 452 VGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNGTFYQFLVGDRSHP- 510
G + LL N+YS S W++ +R++ + K PG S IE+ G +F+ D P
Sbjct: 509 SGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKS-PGFSWIEVKGKLCEFIAFDDKKPL 567
Query: 511 QSRELYSFLDEMTTKLKI 528
+S +LY LD + ++++
Sbjct: 568 ESDDLYKTLDTVGVQMRL 585
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 281 bits (720), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 163/470 (34%), Positives = 259/470 (55%), Gaps = 15/470 (3%)
Query: 67 AHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGAC 126
AHK+FD+IP+ D+ +I S RLL G+ PN ++F G+
Sbjct: 46 AHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCL--GIRPNEFTFGTVIGSS 103
Query: 127 GNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWN 186
V+ G+Q+ +A+K+GL SNVFV +A++ Y K + R+ F+ D ++ S
Sbjct: 104 TTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSIT 163
Query: 187 TMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPK- 245
+I+ Y+ +A LF M E+ VV+W+ +I G+ Q G EA++ F ML+ G
Sbjct: 164 NLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVI 223
Query: 246 PNEYTFVSALAACSNLVALDQGKWIHS----FIGRGEIKMNERLLASIIDMYAKCGEIES 301
PNE TF A+ A SN+ + GK IH+ F+G+ + N + S+I Y+KCG +E
Sbjct: 224 PNESTFPCAITAISNIASHGAGKSIHACAIKFLGK---RFNVFVWNSLISFYSKCGNMED 280
Query: 302 ASRVFWE-HNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKM-KVENVSPNKVTFVALLNA 359
+ F + +R + WN+MI G+A +G+ EA+ +F+KM K N+ PN VT + +L A
Sbjct: 281 SLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFA 340
Query: 360 CSHGYMVEEGKLYFRLMVSDYGI--IPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPD 417
C+H +++EG +YF V+DY + E+EHY CMVD+LSR+G KEAE++I SMP+ P
Sbjct: 341 CNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPG 400
Query: 418 VAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREK 477
+ W A+L C+I+ + I E+DP V +V+L N YS+ W + ++R K
Sbjct: 401 IGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRK 460
Query: 478 SEISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLK 527
+ T K+ GCS IE+ F+ D+++ E+Y L ++ L+
Sbjct: 461 MK-ETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRMLALVSQHLE 509
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 276 bits (707), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 196/640 (30%), Positives = 311/640 (48%), Gaps = 64/640 (10%)
Query: 4 FCSTLTKPFHSDHCCRLASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVA--- 60
F S L+ F ++ L+S++ +C+ + KQ H + L AN + +
Sbjct: 150 FSSMLSHCFPNEF--TLSSVLTSCR-YEPGKQVHGLALKLGLHCSIYVANAVISMYGRCH 206
Query: 61 DASLSY-AHKLFDQIPQPDLFIYNTMIKAHSLSPSSCN---DSLMVFRLLTRDSGLSPNR 116
D + +Y A +F+ I +L +N+MI A CN ++ VF + D G+ +R
Sbjct: 207 DGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQ----CCNLGKKAIGVFMRMHSD-GVGFDR 261
Query: 117 YSFVFTFGACGNGLSVQEGE------QVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYG 170
+ + + + E Q+ S VK GL + V ALI +Y +
Sbjct: 262 ATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSE------- 314
Query: 171 RKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQE-QDVVSWSTIIAGYVQVGCF 229
M+ Y + +LF EM +D+V+W+ II + V
Sbjct: 315 -----------------MLEDY------TDCYKLFMEMSHCRDIVAWNGIITAFA-VYDP 350
Query: 230 MEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASI 289
A+ F ++ Q P+ YTF S L AC+ LV IH+ + +G + L S+
Sbjct: 351 ERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSL 410
Query: 290 IDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPN 349
I YAKCG ++ RVF + ++ R V WN+M+ +++HG+ + VFQKM +++P+
Sbjct: 411 IHAYAKCGSLDLCMRVFDDMDS-RDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPD 466
Query: 350 KVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMI 409
TF+ALL+ACSH VEEG FR M +P++ HY C++D+LSRA EAE++I
Sbjct: 467 SATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVI 526
Query: 410 SSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEM-DPNHVGCHVLLGNIYSSSGRW 468
MPM PD +W A+L +CR + + G +KE+ +P + ++ + NIY++ G +
Sbjct: 527 KQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSF 586
Query: 469 NDARMLREKSEISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKI 528
N+A + ++ E + +K P S E+ ++F G R P +Y L + + LK
Sbjct: 587 NEANLSIKEME-TWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYRELKRLISWLKE 645
Query: 529 AGYVPVFGXXXXXXXXXXXXXTALSVHSEKLAIAFGLLNTAPGTP-----IRIVKNLRVC 583
GYVP L HSEKLA+AF ++ + I+I+KN R+C
Sbjct: 646 MGYVPEMRSASQDIEDEEQEEDNLLHHSEKLALAFAVMEGRKSSDCGVNLIQIMKNTRIC 705
Query: 584 RDCHQVTKFISKVYDRVIIVRDRTRYHHFKDGICSCKDYW 623
DCH K SK+ + I++RD R+HHFKD CSC DYW
Sbjct: 706 IDCHNFMKLASKLLGKEILMRDSNRFHHFKDSSCSCNDYW 745
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 127/275 (46%), Gaps = 25/275 (9%)
Query: 186 NTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPK 245
N +I Y GN+ A+++FD M E++VVSW+ +I GYVQ G E F ML
Sbjct: 100 NFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLS-HCF 158
Query: 246 PNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRV 305
PNE+T S L +C + GK +H + + + + ++I MY +C + +A
Sbjct: 159 PNEFTLSSVLTSCR----YEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEA 214
Query: 306 F--WEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHG 363
+ +E + + WN+MI F +AI VF +M + V ++ T LLN CS
Sbjct: 215 WTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRAT---LLNICSSL 271
Query: 364 YM--------VEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAED---MISSM 412
Y V + L + G++ + E ++ + S +L++ D + M
Sbjct: 272 YKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSE--MLEDYTDCYKLFMEM 329
Query: 413 PMAPDVAIWGAVLNACRIYKDMERGYRI-GRIIKE 446
D+ W ++ A +Y D ER + G++ +E
Sbjct: 330 SHCRDIVAWNGIITAFAVY-DPERAIHLFGQLRQE 363
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 275 bits (704), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 158/491 (32%), Positives = 263/491 (53%), Gaps = 23/491 (4%)
Query: 23 LVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLV----------ADAS---LSYAHK 69
L+ C++++ + Q HAQ +T+ IS+ N V A AS +SYA
Sbjct: 10 LLKLCRTLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYATS 69
Query: 70 LFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACG-- 127
+F I P F +NT+I+ +L S S F + R S + P+ ++F F F AC
Sbjct: 70 VFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRS-VPPDFHTFPFVFKACAAK 128
Query: 128 -NGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWN 186
NG + + + A++ GL S++F +N LI +Y ++ ++F+ +D+ ++N
Sbjct: 129 KNG-DLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYN 187
Query: 187 TMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKP 246
+I V + + +A+ELFD M +D+VSW+++I+GY Q+ EA+ F M+ +G KP
Sbjct: 188 VLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKP 247
Query: 247 NEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVF 306
+ VS L+AC+ +GK IH + R + ++ L ++D YAKCG I++A +F
Sbjct: 248 DNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIF 307
Query: 307 WEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMV 366
E + + ++ WNAMI G AMHG + F+KM + P+ VTF+++L CSH +V
Sbjct: 308 -ELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLV 366
Query: 367 EEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPM----APDVAIWG 422
+E + F M S Y + E++HYGCM DLL RAGL++EA +MI MP + W
Sbjct: 367 DEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWS 426
Query: 423 AVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEIST 482
+L CRI+ ++E + +K + P G + ++ +Y+++ RW + +RE +
Sbjct: 427 GLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDK 486
Query: 483 ATKKIPGCSSI 493
KK G S +
Sbjct: 487 KVKKNVGFSKV 497
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 271 bits (694), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 156/483 (32%), Positives = 259/483 (53%), Gaps = 42/483 (8%)
Query: 19 RLASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVADASLSYAHKLFDQIPQPD 78
R +L+ CKS+Q +KQ HAQ++T L H +K L L + LSYA + QIP P
Sbjct: 11 RCLNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVCLSYALSILRQIPNPS 70
Query: 79 LFIYNTMIKA----HSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACG-NGLSVQ 133
+F+YNT+I + H+ + + SL L +R + + PN +++ F A G + +
Sbjct: 71 VFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHR 130
Query: 134 EGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYV 193
G + +H +K F V+ D + ++ Y
Sbjct: 131 HGRALHAHVLK-----------------------------FLEPVNHDRFVQAALVGFYA 161
Query: 194 GSGNMSQAKELFDEMQEQDVVSWSTIIAGYV---QVGCFMEALDFFHRMLQVGPKPNEYT 250
G + +A+ LF+ ++E D+ +W+T++A Y ++ E L F RM QV +PNE +
Sbjct: 162 NCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRM-QV--RPNELS 218
Query: 251 FVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHN 310
V+ + +C+NL +G W H ++ + + +N+ + S+ID+Y+KCG + A +VF E
Sbjct: 219 LVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEM- 277
Query: 311 AKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGK 370
++R V +NAMI G A+HG E I++++ + + + P+ TFV ++ACSH +V+EG
Sbjct: 278 SQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGL 337
Query: 371 LYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRI 430
F M + YGI P++EHYGC+VDLL R+G L+EAE+ I MP+ P+ +W + L + +
Sbjct: 338 QIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQT 397
Query: 431 YKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGC 490
+ D ERG + + ++ + G +VLL NIY+ RW D RE + K PG
Sbjct: 398 HGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKS-PGI 456
Query: 491 SSI 493
S++
Sbjct: 457 STL 459
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 167/506 (33%), Positives = 270/506 (53%), Gaps = 46/506 (9%)
Query: 27 CKSIQQIKQTHAQLVTTALISHHVSANKFLKLVA-----DASLSYAHKLFDQIPQPDLFI 81
C +++QIK TH+ + L + + +K L + YA +FD I P+ F+
Sbjct: 21 CNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFV 80
Query: 82 YNTMIKAHSLSPSSCNDSLMVFRLLTRDS--GLSPNRYSFVFTFGACGNGLSVQEGEQVR 139
Y+TMI+ S S S + L F L+ ++ ++P+ +F F AC G+Q+
Sbjct: 81 YDTMIRICSRS-SQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIH 139
Query: 140 SHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMS 199
VK G VF+ + G V+ G ++ YV +
Sbjct: 140 CWVVKNG----VFLSD---------GHVQTG-----------------VLRIYVEDKLLF 169
Query: 200 QAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACS 259
A+++FDE+ + DVV W ++ GYV+ G E L+ F ML G +P+E++ +AL AC+
Sbjct: 170 DARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACA 229
Query: 260 NLVALDQGKWIHSFIGRGE-IKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPW 318
+ AL QGKWIH F+ + I+ + + +++DMYAKCG IE+A VF E +R V+ W
Sbjct: 230 QVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVF-EKLTRRNVFSW 288
Query: 319 NAMIGGFAMHGKPSEAIKVFQKMKVEN-VSPNKVTFVALLNACSHGYMVEEGKLYFRLMV 377
A+IGG+A +G +A +++ E+ + P+ V + +L AC+HG +EEG+ M
Sbjct: 289 AALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENME 348
Query: 378 SDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERG 437
+ YGI P+ EHY C+VDL+ RAG L +A D+I MPM P ++WGA+LN CR +K++E G
Sbjct: 349 ARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELG 408
Query: 438 YRIGRIIKEMDPNHV----GCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSI 493
+ + +++ +V V L NIY S R +A +R E +K PG S +
Sbjct: 409 ELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIE-QRGIRKTPGWSLL 467
Query: 494 ELNGTFYQFLVGDRSHPQSRELYSFL 519
E++G +F+ GD SHP ++++ +
Sbjct: 468 EVDGIVTKFVSGDVSHPNLLQIHTLI 493
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 169/511 (33%), Positives = 266/511 (52%), Gaps = 55/511 (10%)
Query: 20 LASLVDTCKSIQQIKQ--THAQLVTTALISHHVSANKFLKLVADASLSYAHKLFDQIPQP 77
+ SL D+ + + ++ THA+ T +L + F L ++ A+K+F ++ +
Sbjct: 2 ITSLRDSSLLVAESRELITHAKCSTESLNQMFL----FGMLCLMGVIASANKVFCEMVEK 57
Query: 78 DLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQ 137
++ ++ +MI + L N L+ R R LSP R
Sbjct: 58 NVVLWTSMINGYLL-----NKDLVSAR---RYFDLSPER--------------------- 88
Query: 138 VRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGN 197
++ + N +I Y + G + R +F+ +D+ SWNT++ Y G+
Sbjct: 89 ------------DIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGD 136
Query: 198 MSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPK-PNEYTFVSALA 256
M + +FD+M E++V SW+ +I GY Q G E L F RM+ G PN+ T L+
Sbjct: 137 MEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLS 196
Query: 257 ACSNLVALDQGKWIHSF---IGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKR 313
AC+ L A D GKW+H + +G ++ +N + ++IDMY KCG IE A VF + +R
Sbjct: 197 ACAKLGAFDFGKWVHKYGETLGYNKVDVNVK--NALIDMYGKCGAIEIAMEVF-KGIKRR 253
Query: 314 KVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYF 373
+ WN MI G A HG +EA+ +F +MK +SP+KVTFV +L AC H +VE+G YF
Sbjct: 254 DLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYF 313
Query: 374 RLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKD 433
M +D+ I+PEIEH GC+VDLLSRAG L +A + I+ MP+ D IW +L A ++YK
Sbjct: 314 NSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKK 373
Query: 434 MERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSI 493
++ G + +++P + V+L NIY +GR++DA L+ T KK G S I
Sbjct: 374 VDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMR-DTGFKKEAGVSWI 432
Query: 494 ELNGTFYQFLVGDRSHPQSRELYSFLDEMTT 524
E + +F HP++ EL L E+ +
Sbjct: 433 ETDDGLVKFYSSGEKHPRTEELQRILRELKS 463
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 270 bits (689), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 157/505 (31%), Positives = 252/505 (49%), Gaps = 39/505 (7%)
Query: 20 LASLVDTCKSIQQIK---QTHAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIP 75
A + C ++Q+K H ++ ++ AN + + + LF+ +
Sbjct: 212 FAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMS 271
Query: 76 QPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEG 135
+ D+ + ++I A+ ++ R+S + PN +F F AC + + G
Sbjct: 272 ERDVVSWTSLIVAYKRIGQEVKAVETFIKM--RNSQVPPNEQTFASMFSACASLSRLVWG 329
Query: 136 EQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGS 195
EQ+ + + +GL+ ++ V N+++ MY
Sbjct: 330 EQLHCNVLSLGLNDSLSVSNSMMKMYST-------------------------------C 358
Query: 196 GNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSAL 255
GN+ A LF M+ +D++SWSTII GY Q G E +F M Q G KP ++ S L
Sbjct: 359 GNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLL 418
Query: 256 AACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKV 315
+ N+ ++ G+ +H+ ++ N + +S+I+MY+KCG I+ AS +F E + + +
Sbjct: 419 SVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETD-RDDI 477
Query: 316 WPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRL 375
AMI G+A HGK EAI +F+K P+ VTF+++L AC+H ++ G YF +
Sbjct: 478 VSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNM 537
Query: 376 MVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDME 435
M Y + P EHYGCMVDLL RAG L +AE MI+ M D +W +L AC+ D+E
Sbjct: 538 MQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIE 597
Query: 436 RGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIEL 495
RG R I E+DP V L NIYSS+G +A +R+ + K+ PG SSI++
Sbjct: 598 RGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKE-PGWSSIKI 656
Query: 496 NGTFYQFLVGDRSHPQSRELYSFLD 520
F+ GDR HPQS ++Y+ L+
Sbjct: 657 KDCVSAFVSGDRFHPQSEDIYNILE 681
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 198/420 (47%), Gaps = 51/420 (12%)
Query: 20 LASLVDTCKSIQQIKQTHAQLVTTAL------ISHHV----SANKFLK-LVADASLSYAH 68
+ S V C +IQ+ T L+ + IS+ V N L+ L+ +L A
Sbjct: 1 MISSVRNCGTIQRFCTTSISLLQKPVEENIVRISNQVMVKFDPNSHLRSLINAGNLRAAR 60
Query: 69 KLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLL-TRDSGLSPNRYSFVFTFGACG 127
++FD++P D+ + ++IK + ++ ++ +++L++F + D +SP+ ACG
Sbjct: 61 QVFDKMPHGDIVSWTSIIKRY-VTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACG 119
Query: 128 NGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNT 187
++ GE + ++AVK L S+V+V ++L+ MY + G ++ +VF
Sbjct: 120 QSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVF------------- 166
Query: 188 MIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPN 247
EM ++ V+W+ II G V G + E L +F M + +
Sbjct: 167 ------------------SEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSD 208
Query: 248 EYTFVSALAACSNLVALDQGKWIHS-FIGRGEIKMNERLLASIIDMYAKCGEIESASRVF 306
YTF AL AC+ L + GK IH+ I RG + + S+ MY +CGE++ +F
Sbjct: 209 TYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVT-TLCVANSLATMYTECGEMQDGLCLF 267
Query: 307 WEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNAC-SHGYM 365
E+ ++R V W ++I + G+ +A++ F KM+ V PN+ TF ++ +AC S +
Sbjct: 268 -ENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRL 326
Query: 366 VEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVL 425
V +L+ ++ G+ + M+ + S G L A + M D+ W ++
Sbjct: 327 VWGEQLHCNVL--SLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMR-CRDIISWSTII 383
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 127/266 (47%), Gaps = 16/266 (6%)
Query: 186 NTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQV--G 243
N+ + + + +GN+ A+++FD+M D+VSW++II YV EAL F M V
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 244 PKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESAS 303
P+ L AC + G+ +H++ + + + + +S++DMY + G+I+ +
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163
Query: 304 RVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHG 363
RVF E + V W A+I G G+ E + F +M + TF L AC+
Sbjct: 164 RVFSEMPFRNAV-TWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGL 222
Query: 364 YMVEEGK-LYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWG 422
V+ GK ++ ++V G + + + + + G +++ + +M DV W
Sbjct: 223 RQVKYGKAIHTHVIVR--GFVTTLCVANSLATMYTECGEMQDGLCLFENMS-ERDVVSWT 279
Query: 423 AVLNACRIYKDMERGYRIGRIIKEMD 448
+++ A YK RIG+ +K ++
Sbjct: 280 SLIVA---YK------RIGQEVKAVE 296
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 269 bits (688), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 149/466 (31%), Positives = 248/466 (53%), Gaps = 3/466 (0%)
Query: 67 AHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGAC 126
A K+FD++ + D+ +N+MI +S S S D +++ + S PN + + F AC
Sbjct: 186 ARKVFDEMSERDVVSWNSMISGYSQS-GSFEDCKKMYKAMLACSDFKPNGVTVISVFQAC 244
Query: 127 GNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWN 186
G + G +V ++ + ++ + NA+IG Y K G ++Y R +F+ +KD ++
Sbjct: 245 GQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYG 304
Query: 187 TMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKP 246
+I+ Y+ G + +A LF EM+ + +W+ +I+G +Q E ++ F M++ G +P
Sbjct: 305 AIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRP 364
Query: 247 NEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVF 306
N T S L + + L GK IH+F R N + SIID YAK G + A RVF
Sbjct: 365 NTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVF 424
Query: 307 WEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMV 366
++ R + W A+I +A+HG A +F +M+ P+ VT A+L+A +H
Sbjct: 425 -DNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDS 483
Query: 367 EEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLN 426
+ + F M++ Y I P +EHY CMV +LSRAG L +A + IS MP+ P +WGA+LN
Sbjct: 484 DMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLN 543
Query: 427 ACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKK 486
+ D+E + EM+P + G + ++ N+Y+ +GRW +A M+R K + KK
Sbjct: 544 GASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMK-RIGLKK 602
Query: 487 IPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYV 532
IPG S IE F+ D S +S+E+Y ++ + + Y+
Sbjct: 603 IPGTSWIETEKGLRSFIAKDSSCERSKEMYEIIEGLVESMSDKEYI 648
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/438 (24%), Positives = 178/438 (40%), Gaps = 66/438 (15%)
Query: 32 QIKQTHAQLVTTALISHHVSANKFLKLVADAS-LSYAHKLFDQIPQPDLFIYNTMIKAHS 90
+ Q HA++V ++ + A+K + A +FD+I + F YN ++ A++
Sbjct: 40 HVLQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYT 99
Query: 91 LSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSN 150
S Y F+ G S + R ++ +
Sbjct: 100 ----------------------SREMYFDAFSLFLSWIGSSCYSSDAARPDSISISC--- 134
Query: 151 VFVVNALIGMYGKWGLVEYGRKVFEWAV----DKDLYSWNTMIAAYVGSGNMSQAKELFD 206
V+ AL G W L R+V + + D D++ N MI Y N+ A+++FD
Sbjct: 135 --VLKALSGCDDFW-LGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFD 191
Query: 207 EMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGP-KPNEYTFVSALAACSNLVALD 265
EM E+DVVSW+++I+GY Q G F + + ML KPN T +S AC L
Sbjct: 192 EMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLI 251
Query: 266 QGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVW--------- 316
G +H + I+M+ L ++I YAKCG ++ A +F E + K V
Sbjct: 252 FGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYM 311
Query: 317 ---------------------PWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVA 355
WNAMI G + E I F++M PN VT +
Sbjct: 312 AHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSS 371
Query: 356 LLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMA 415
LL + ++ ++ GK + + G I ++D ++ G L A+ + +
Sbjct: 372 LLPSLTYSSNLKGGKEIHAFAIRN-GADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDR 430
Query: 416 PDVAIWGAVLNACRIYKD 433
+A W A++ A ++ D
Sbjct: 431 SLIA-WTAIITAYAVHGD 447
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 162/506 (32%), Positives = 268/506 (52%), Gaps = 46/506 (9%)
Query: 27 CKSIQQIKQTHAQLVTTALISHHVSANKFLKLVA-----DASLSYAHKLFDQIPQPDLFI 81
C +++QIK TH+ + L + + +K L + YA +FD I P+ F+
Sbjct: 21 CNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFV 80
Query: 82 YNTMIKAHSLSPSSCNDSLMVFRLLTRDS--GLSPNRYSFVFTFGACGNGLSVQEGEQVR 139
Y+TMI+ S S S + L F L+ ++ ++P+ +F F AC G+Q+
Sbjct: 81 YDTMIRICSRS-SQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIH 139
Query: 140 SHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMS 199
VK G VF+ D + ++ YV +
Sbjct: 140 CWVVKNG----VFL--------------------------SDSHVQTGVLRIYVEDKLLL 169
Query: 200 QAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACS 259
A+++FDE+ + DVV W ++ GYV+ G E L+ F ML G +P+E++ +AL AC+
Sbjct: 170 DARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACA 229
Query: 260 NLVALDQGKWIHSFIGRGE-IKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPW 318
+ AL QGKWIH F+ + I+ + + +++DMYAKCG IE+A VF + +R V+ W
Sbjct: 230 QVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVF-KKLTRRNVFSW 288
Query: 319 NAMIGGFAMHGKPSEAIKVFQKMKVEN-VSPNKVTFVALLNACSHGYMVEEGKLYFRLMV 377
A+IGG+A +G +A+ ++++ E+ + P+ V + +L AC+HG +EEG+ M
Sbjct: 289 AALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENME 348
Query: 378 SDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERG 437
+ Y I P+ EHY C+VDL+ RAG L +A ++I MPM P ++WGA+LN CR +K++E G
Sbjct: 349 ARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELG 408
Query: 438 YRIGRIIKEMDPNHV----GCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSI 493
+ + +++ +V V L NIY S R +A +R E +K PG S +
Sbjct: 409 ELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIE-QRGVRKTPGWSVL 467
Query: 494 ELNGTFYQFLVGDRSHPQSRELYSFL 519
E++G +F+ GD SHP ++++ +
Sbjct: 468 EVDGNVTKFVSGDVSHPNLLQIHTVI 493
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 266 bits (679), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 152/469 (32%), Positives = 269/469 (57%), Gaps = 19/469 (4%)
Query: 64 LSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVF-RLLTRDSGLSPNRYSFVFT 122
+ A +LFD++P+ ++ +N+M+KA + ++++ +F R+ RD V +
Sbjct: 156 IDKALELFDEMPERNIVSWNSMVKAL-VQRGRIDEAMNLFERMPRRD----------VVS 204
Query: 123 FGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDL 182
+ A +GL+ + N+ NA+I Y + ++ ++F+ ++D
Sbjct: 205 WTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDF 264
Query: 183 YSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQV 242
SWNTMI ++ + M++A LFD M E++V+SW+T+I GYV+ EAL+ F +ML+
Sbjct: 265 ASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRD 324
Query: 243 GP-KPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIES 301
G KPN T+VS L+ACS+L L +G+ IH I + + NE + +++++MY+K GE+ +
Sbjct: 325 GSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIA 384
Query: 302 ASRVFWEHNA---KRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLN 358
A ++F N +R + WN+MI +A HG EAI+++ +M+ P+ VT++ LL
Sbjct: 385 ARKMF--DNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLF 442
Query: 359 ACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDV 418
ACSH +VE+G +F+ +V D + EHY C+VDL RAG LK+ + I+
Sbjct: 443 ACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSR 502
Query: 419 AIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKS 478
+ +GA+L+AC ++ ++ + + + E + G +VL+ NIY+++G+ +A +R K
Sbjct: 503 SFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKM 562
Query: 479 EISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLK 527
+ KK PGCS +++ + F+VGD+SHPQ L S L ++ K++
Sbjct: 563 K-EKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILSDLRNKMR 610
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 158/359 (44%), Gaps = 63/359 (17%)
Query: 157 LIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFD---------- 206
LIG K G + RK+F+ ++D+ +W +I Y+ G+M +A+ELFD
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVT 111
Query: 207 ----------------------EMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGP 244
EM E++VVSW+T+I GY Q G +AL+ F M P
Sbjct: 112 WTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEM----P 167
Query: 245 KPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASR 304
+ N ++ S + A +D+ + + R ++ +++D AK G+++ A R
Sbjct: 168 ERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVS----WTAMVDGLAKNGKVDEARR 223
Query: 305 VFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALL------N 358
+F + +R + WNAMI G+A + + EA ++FQ M + + +
Sbjct: 224 LF-DCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNK 282
Query: 359 ACS-HGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPD 417
AC M E+ + + M++ Y E E + + R G +K P+
Sbjct: 283 ACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVK------------PN 330
Query: 418 VAIWGAVLNACRIYKDMERGYRIGRIIKEM--DPNHVGCHVLLGNIYSSSGRWNDARML 474
V + ++L+AC + G +I ++I + N + LL N+YS SG AR +
Sbjct: 331 VGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALL-NMYSKSGELIAARKM 388
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 150/322 (46%), Gaps = 37/322 (11%)
Query: 58 LVADASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRY 117
+ + ++ A LFD++P+ ++ + TMI + + ++L VF + RD + PN
Sbjct: 274 FIRNREMNKACGLFDRMPEKNVISWTTMITGY-VENKENEEALNVFSKMLRDGSVKPNVG 332
Query: 118 SFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWA 177
++V AC + + EG+Q+ K N V +AL+ MY K G + RK+F+
Sbjct: 333 TYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNG 392
Query: 178 V--DKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDF 235
+ +DL SWN+MIA Y G+ +A E++++M++
Sbjct: 393 LVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKH------------------------ 428
Query: 236 FHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGE-IKMNERLLASIIDMYA 294
G KP+ T+++ L ACS+ +++G + R E + + E ++D+
Sbjct: 429 -------GFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCG 481
Query: 295 KCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFV 354
+ G ++ + +A+ + A++ +H + S A +V +K+ +E S + T+V
Sbjct: 482 RAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKV-LETGSDDAGTYV 540
Query: 355 ALLNA-CSHGYMVEEGKLYFRL 375
+ N ++G E ++ ++
Sbjct: 541 LMSNIYAANGKREEAAEMRMKM 562
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 265 bits (676), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 163/521 (31%), Positives = 271/521 (52%), Gaps = 44/521 (8%)
Query: 14 SDHCCRLASLVDTCKSIQ---QIKQTHAQLVTTALISHHVSANKFLKLVADASL-SYAHK 69
SD C LAS + C + Q KQ H V L + + + + + + A K
Sbjct: 527 SDGAC-LASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARK 585
Query: 70 LFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFR-LLTRDSGLSPNRYSFVFTFGACGN 128
+F +P+ + N +I +S ++ +++++F+ +LTR G++P+ +F AC
Sbjct: 586 VFSSLPEWSVVSMNALIAGYS--QNNLEEAVVLFQEMLTR--GVNPSEITFATIVEACHK 641
Query: 129 GLSVQEGEQVRSHAVKVGLDSN-VFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNT 187
S+ G Q K G S ++ +L+GMY
Sbjct: 642 PESLTLGTQFHGQITKRGFSSEGEYLGISLLGMY-------------------------- 675
Query: 188 MIAAYVGSGNMSQAKELFDEMQE-QDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKP 246
+ S M++A LF E+ + +V W+ +++G+ Q G + EAL F+ M G P
Sbjct: 676 -----MNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLP 730
Query: 247 NEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVF 306
++ TFV+ L CS L +L +G+ IHS I ++E ++IDMYAKCG+++ +S+VF
Sbjct: 731 DQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVF 790
Query: 307 WEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMV 366
E + V WN++I G+A +G +A+K+F M+ ++ P+++TF+ +L ACSH V
Sbjct: 791 DEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKV 850
Query: 367 EEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLN 426
+G+ F +M+ YGI ++H CMVDLL R G L+EA+D I + + PD +W ++L
Sbjct: 851 SDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLG 910
Query: 427 ACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKK 486
ACRI+ D RG + E++P + +VLL NIY+S G W A LR K KK
Sbjct: 911 ACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALR-KVMRDRGVKK 969
Query: 487 IPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLK 527
+PG S I++ + F GD+SH + ++ FL+++ +K
Sbjct: 970 VPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLMK 1010
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/430 (26%), Positives = 203/430 (47%), Gaps = 42/430 (9%)
Query: 34 KQTHAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIPQPDLFIYNTMIKAHSLS 92
K H++ + + S N + L A A +SYA K FD + + D+ +N+M+ +S S
Sbjct: 80 KAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYS-S 137
Query: 93 PSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVF 152
L F L + + PN+++F C +V+ G Q+ +K+GL+ N +
Sbjct: 138 IGKPGKVLRSFVSLFENQ-IFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSY 196
Query: 153 VVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWN-------------------------- 186
AL+ MY K + R+VFEW VD + W
Sbjct: 197 CGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEG 256
Query: 187 ---------TMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFH 237
T+I Y+ G + A+ LF EM DVV+W+ +I+G+ + GC A+++F
Sbjct: 257 HRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFF 316
Query: 238 RMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCG 297
M + K T S L+A + LD G +H+ + + N + +S++ MY+KC
Sbjct: 317 NMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCE 376
Query: 298 EIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALL 357
++E+A++VF K V+ WNAMI G+A +G+ + +++F MK + + TF +LL
Sbjct: 377 KMEAAAKVFEALEEKNDVF-WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLL 435
Query: 358 NACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPD 417
+ C+ + +E G + +++ + + +VD+ ++ G L++A + M +
Sbjct: 436 STCAASHDLEMGSQFHSIIIKK-KLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDN 494
Query: 418 VAIWGAVLNA 427
V W ++ +
Sbjct: 495 VT-WNTIIGS 503
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 184/411 (44%), Gaps = 48/411 (11%)
Query: 36 THAQLVTTALISHHVSANKFLKLVADAS-LSYAHKLFDQIPQPDLFIYNTMIKAHSLSPS 94
HA+ + L S+ + + + + + A K+F+ + + + +N MI+ ++ +
Sbjct: 349 VHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGE 408
Query: 95 SCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVV 154
S +M + + SG + + ++F C ++ G Q S +K L N+FV
Sbjct: 409 S--HKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVG 466
Query: 155 NALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVV 214
NAL+ MY K G + A+++F+ M ++D V
Sbjct: 467 NALVDMYAK-------------------------------CGALEDARQIFERMCDRDNV 495
Query: 215 SWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFI 274
+W+TII YVQ EA D F RM G + S L AC+++ L QGK +H
Sbjct: 496 TWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLS 555
Query: 275 GRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEA 334
+ + + +S+IDMY+KCG I+ A +VF + V NA+I G++ EA
Sbjct: 556 VKCGLDRDLHTGSSLIDMYSKCGIIKDARKVF-SSLPEWSVVSMNALIAGYS-QNNLEEA 613
Query: 335 IKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYG-CMV 393
+ +FQ+M V+P+++TF ++ AC + G F ++ G E E+ G ++
Sbjct: 614 VVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGT-QFHGQITKRGFSSEGEYLGISLL 672
Query: 394 DLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLN----------ACRIYKDM 434
+ + + EA + S + + +W +++ A + YK+M
Sbjct: 673 GMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEM 723
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 141/312 (45%), Gaps = 41/312 (13%)
Query: 129 GLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTM 188
L+++ G+ V S ++ +G+DS + NA++ +Y K V Y K F++
Sbjct: 73 ALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL----------- 121
Query: 189 IAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNE 248
E+DV +W+++++ Y +G + L F + + PN+
Sbjct: 122 ---------------------EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNK 160
Query: 249 YTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWE 308
+TF L+ C+ ++ G+ IH + + ++ N +++DMYAKC I A RVF E
Sbjct: 161 FTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVF-E 219
Query: 309 HNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEE 368
W + G+ G P EA+ VF++M+ E P+ + FV ++N +++
Sbjct: 220 WIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKD 279
Query: 369 GKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSM---PMAPDVAIWGAVL 425
+L F M S P++ + M+ + G A + +M + + G+VL
Sbjct: 280 ARLLFGEMSS-----PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVL 334
Query: 426 NACRIYKDMERG 437
+A I +++ G
Sbjct: 335 SAIGIVANLDLG 346
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 265 bits (676), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 156/439 (35%), Positives = 237/439 (53%), Gaps = 44/439 (10%)
Query: 62 ASLSYAHKLFDQIPQPDLFIYNTMIKAH---SLSPSSCNDSLMVFRL--LTRDSGLSPNR 116
++ A K+FD+IP + ++ ++K + S P VFRL L RD+GL+ +
Sbjct: 158 GTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPE-------VFRLFCLMRDTGLALDA 210
Query: 117 YSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEW 176
+ + ACGN VF GK G +G +
Sbjct: 211 LTLICLVKACGN----------------------VFA--------GKVGKCVHGVSIRRS 240
Query: 177 AVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFF 236
+D+ Y ++I YV + A++LF+ +++VV W+T+I+G+ + +EA D F
Sbjct: 241 FIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLF 300
Query: 237 HRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKC 296
+ML+ PN+ T + L +CS+L +L GK +H ++ R I+M+ S IDMYA+C
Sbjct: 301 RQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARC 360
Query: 297 GEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVAL 356
G I+ A VF + +R V W++MI F ++G EA+ F KMK +NV PN VTFV+L
Sbjct: 361 GNIQMARTVF-DMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSL 419
Query: 357 LNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAP 416
L+ACSH V+EG F M DYG++PE EHY CMVDLL RAG + EA+ I +MP+ P
Sbjct: 420 LSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKP 479
Query: 417 DVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLRE 476
+ WGA+L+ACRI+K+++ I + M+P +VLL NIY+ +G W +R
Sbjct: 480 MASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRR 539
Query: 477 KSEISTATKKIPGCSSIEL 495
K I K + G S+ E+
Sbjct: 540 KMGIKGYRKHV-GQSATEV 557
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 195/414 (47%), Gaps = 42/414 (10%)
Query: 20 LASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLK-LVADASLSYAHKLFDQIP--Q 76
L +++ K++ +Q HA+++ V + + L +A F++IP +
Sbjct: 10 LLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWK 69
Query: 77 PDLFIYNTMIKAHSLSPSSC-NDSLMVFRLLTRDSGLSPNRYSFVFTFGAC-GNGLSVQE 134
+ +NT++ +S S + C +D L+++ + R + ++ VF AC G GL ++
Sbjct: 70 RNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCD-GVDSFNLVFAIKACVGLGL-LEN 127
Query: 135 GEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVG 194
G + A+K GLD + +V +L+ MY + G +E +KV
Sbjct: 128 GILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKV--------------------- 166
Query: 195 SGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSA 254
FDE+ ++ V W ++ GY++ E F M G + T +
Sbjct: 167 ----------FDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICL 216
Query: 255 LAACSNLVALDQGKWIHSF-IGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKR 313
+ AC N+ A GK +H I R I ++ L ASIIDMY KC +++A ++F E + R
Sbjct: 217 VKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLF-ETSVDR 275
Query: 314 KVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYF 373
V W +I GFA + EA +F++M E++ PN+ T A+L +CS + GK
Sbjct: 276 NVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVH 335
Query: 374 RLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNA 427
M+ + GI + ++ +D+ +R G ++ A + MP +V W +++NA
Sbjct: 336 GYMIRN-GIEMDAVNFTSFIDMYARCGNIQMARTVFDMMP-ERNVISWSSMINA 387
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/428 (35%), Positives = 246/428 (57%), Gaps = 14/428 (3%)
Query: 79 LFIYNTMIKAHSLSPSSCN-----DSLMVFRLLT-RDSGLSP-NRYSFVFTFGACGNGL- 130
LF++N +++ +SL + + D L L+ + L P + ++++F A N
Sbjct: 77 LFLFNPLLRCYSLGETPLHAYFLYDQLQRLHFLSDHNKSLPPFDSFTYLFLLKASSNPRF 136
Query: 131 -SVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMI 189
S+ G + +K+G +S+V+V AL+GMY G + KVF+ +++ +WN MI
Sbjct: 137 PSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMI 196
Query: 190 AAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGP-KPNE 248
G+ +A ++M + VVSW+TII GY +V EA+ F RM+ KPNE
Sbjct: 197 TGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNE 256
Query: 249 YTFVSALAACSNLVALDQGKWIHSFIG-RGEIKMNERLLASIIDMYAKCGEIESASRVFW 307
T ++ L A NL L +H+++G RG + + R+ S+ID YAKCG I+SA + F
Sbjct: 257 ITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFI 316
Query: 308 E-HNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMV 366
E N ++ + W MI FA+HG EA+ +F+ M+ + PN+VT +++LNACSHG +
Sbjct: 317 EIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLA 376
Query: 367 EEGKL-YFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVL 425
EE L +F MV++Y I P+++HYGC+VD+L R G L+EAE + +P+ +W +L
Sbjct: 377 EEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLL 436
Query: 426 NACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATK 485
AC +Y D E R+ R + E++ +H G +VL+ NI+ +GR+ DA+ R++ ++
Sbjct: 437 GACSVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVR-GVA 495
Query: 486 KIPGCSSI 493
K+PG S +
Sbjct: 496 KLPGHSQV 503
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 262 bits (670), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 154/505 (30%), Positives = 260/505 (51%), Gaps = 40/505 (7%)
Query: 34 KQTHAQLVTTALISHHVSANKFLKLVADA-SLSYAHKLFDQIPQPDLFIYNTMIKAHSLS 92
+Q H + L+ +N + + + SL+ A K+FD + ++ M+ +S +
Sbjct: 241 RQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQN 300
Query: 93 PSSCNDSLMVFRLLTR--DSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSN 150
+SL +L +R +G+ P+ Y+ V AC + ++EG+Q+ S +K+G + +
Sbjct: 301 ----GESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERH 356
Query: 151 VFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQE 210
+F AL+ MY K +G ++ A++ FD +QE
Sbjct: 357 LFATTALVDMYAK-------------------------------AGCLADARKGFDCLQE 385
Query: 211 QDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWI 270
+DV W+++I+GYVQ EAL + RM G PN+ T S L ACS+L L+ GK +
Sbjct: 386 RDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQV 445
Query: 271 HSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGK 330
H + + + +++ MY+KCG +E + VF + V WNAMI G + +G+
Sbjct: 446 HGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVF-RRTPNKDVVSWNAMISGLSHNGQ 504
Query: 331 PSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYG 390
EA+++F++M E + P+ VTFV +++ACSH VE G YF +M G+ P+++HY
Sbjct: 505 GDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYA 564
Query: 391 CMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPN 450
CMVDLLSRAG LKEA++ I S + + +W +L+AC+ + E G G + +
Sbjct: 565 CMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSR 624
Query: 451 HVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNGTFYQFLVGDRSHP 510
+V L IY++ GR D + + + +K++ GCS IEL ++ F+VGD HP
Sbjct: 625 ESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEV-GCSWIELKNQYHVFVVGDTMHP 683
Query: 511 QSRELYSFLDEMTTKLKIAGYVPVF 535
E + ++ ++ G+V V
Sbjct: 684 MIEETKDLVCLVSRQMIEEGFVTVL 708
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 197/415 (47%), Gaps = 36/415 (8%)
Query: 34 KQTHAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIPQPDLFIYNTMIKAHSLS 92
+ H Q++ T + AN + A L+ AH +F+ I D+ +N++I +S +
Sbjct: 34 RAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQN 93
Query: 93 P--SSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSN 150
SS + +FR + R + PN Y+ F A + S G Q + VK+ +
Sbjct: 94 GGISSSYTVMQLFREM-RAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGD 152
Query: 151 VFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQE 210
++V +L+GMY K GLVE G KVF + +++ Y+W+TM++ Y G + +A ++F
Sbjct: 153 IYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVF----- 207
Query: 211 QDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWI 270
+ F R + G ++Y F + L++ + + + G+ I
Sbjct: 208 -----------------------NLFLREKEEGS-DSDYVFTAVLSSLAATIYVGLGRQI 243
Query: 271 HSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGK 330
H + + L +++ MY+KC + A ++F + + R W+AM+ G++ +G+
Sbjct: 244 HCITIKNGLLGFVALSNALVTMYSKCESLNEACKMF-DSSGDRNSITWSAMVTGYSQNGE 302
Query: 331 PSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYG 390
EA+K+F +M + P++ T V +LNACS +EEGK ++ G +
Sbjct: 303 SLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLK-LGFERHLFATT 361
Query: 391 CMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIK 445
+VD+ ++AG L +A + DVA+W ++++ D E + R +K
Sbjct: 362 ALVDMYAKAGCLADARKGFDCLQ-ERDVALWTSLISGYVQNSDNEEALILYRRMK 415
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/456 (24%), Positives = 206/456 (45%), Gaps = 85/456 (18%)
Query: 69 KLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGL-SPNRYSFVFTFGACG 127
K+F +P+ + + ++TM+ ++ + +++ VF L R+ S + Y F +
Sbjct: 174 KVFAYMPERNTYTWSTMVSGYA-TRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLA 232
Query: 128 NGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNT 187
+ V G Q+ +K GL V + NAL+ MY K
Sbjct: 233 ATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSK------------------------ 268
Query: 188 MIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPN 247
++++A ++FD +++ ++WS ++ GY Q G +EA+ F RM G KP+
Sbjct: 269 -------CESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPS 321
Query: 248 EYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFW 307
EYT V L ACS++ L++GK +HSF+ + + + +++DMYAK G + A + F
Sbjct: 322 EYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGF- 380
Query: 308 EHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACS------ 361
+ +R V W ++I G+ + EA+ ++++MK + PN T ++L ACS
Sbjct: 381 DCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLE 440
Query: 362 -----HGYMV------------------------EEGKLYFRLMVSDYGIIPEIEHYGCM 392
HG+ + E+G L FR + ++ + M
Sbjct: 441 LGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPN-----KDVVSWNAM 495
Query: 393 VDLLSRAGLLKEAEDMISSM---PMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKE--- 446
+ LS G EA ++ M M PD + +++AC +ERG+ ++ +
Sbjct: 496 ISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIG 555
Query: 447 MDP--NHVGCHVLLGNIYSSSGRWNDARMLREKSEI 480
+DP +H C V ++ S +G+ +A+ E + I
Sbjct: 556 LDPKVDHYACMV---DLLSRAGQLKEAKEFIESANI 588
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 158/343 (46%), Gaps = 38/343 (11%)
Query: 2 SRFCSTLTKPFHSDHCCRLASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVAD 61
SR S KP L + D C +++ KQ H+ L+ H + + + A
Sbjct: 311 SRMFSAGIKPSEYTIVGVLNACSDICY-LEEGKQLHSFLLKLGFERHLFATTALVDMYAK 369
Query: 62 AS-LSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFV 120
A L+ A K FD + + D+ ++ ++I + + S ++L+++R + + +G+ PN +
Sbjct: 370 AGCLADARKGFDCLQERDVALWTSLISGY-VQNSDNEEALILYRRM-KTAGIIPNDPTMA 427
Query: 121 FTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDK 180
AC + +++ G+QV H +K G V + +AL MY K G +E G VF +K
Sbjct: 428 SVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNK 487
Query: 181 DLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRML 240
D+ SWN MI+ +G +A ELF+E ML
Sbjct: 488 DVVSWNAMISGLSHNGQGDEALELFEE-------------------------------ML 516
Query: 241 QVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERL--LASIIDMYAKCGE 298
G +P++ TFV+ ++ACS+ +++G W + + +I ++ ++ A ++D+ ++ G+
Sbjct: 517 AEGMEPDDVTFVNIISACSHKGFVERG-WFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQ 575
Query: 299 IESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKM 341
++ A N + W ++ HGK + +K+
Sbjct: 576 LKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKL 618
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 261 bits (668), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 155/503 (30%), Positives = 266/503 (52%), Gaps = 45/503 (8%)
Query: 28 KSIQQIKQTHAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIPQPDLFI--YNT 84
KS++ ++ HA + + AN ++ L A +F+ I + D + +N+
Sbjct: 167 KSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNS 226
Query: 85 MIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVK 144
M KA+S+ + D+ ++ L+ R+ P+ +F+ +C N ++ +G + SHA+
Sbjct: 227 MFKAYSVFGEAF-DAFGLYCLMLREE-FKPDLSTFINLAASCQNPETLTQGRLIHSHAIH 284
Query: 145 VGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKEL 204
+G D+D+ + NT I+ Y S + A+ L
Sbjct: 285 LG-------------------------------TDQDIEAINTFISMYSKSEDTCSARLL 313
Query: 205 FDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVAL 264
FD M + VSW+ +I+GY + G EAL FH M++ G KP+ T +S ++ C +L
Sbjct: 314 FDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSL 373
Query: 265 DQGKWIHSFIGRGEI----KMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNA 320
+ GKWI + R +I + N + ++IDMY+KCG I A +F ++ ++ V W
Sbjct: 374 ETGKWIDA---RADIYGCKRDNVMICNALIDMYSKCGSIHEARDIF-DNTPEKTVVTWTT 429
Query: 321 MIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDY 380
MI G+A++G EA+K+F KM + PN +TF+A+L AC+H +E+G YF +M Y
Sbjct: 430 MIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVY 489
Query: 381 GIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRI 440
I P ++HY CMVDLL R G L+EA ++I +M PD IWGA+LNAC+I+++++ +
Sbjct: 490 NISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQA 549
Query: 441 GRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNGTFY 500
+ ++P +V + NIY+++G W+ +R + KK PG S I++NG +
Sbjct: 550 AESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMK-QRNIKKYPGESVIQVNGKNH 608
Query: 501 QFLVGDRSHPQSRELYSFLDEMT 523
F VG+ H ++ +Y L+ ++
Sbjct: 609 SFTVGEHGHVENEVIYFTLNGLS 631
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 115/467 (24%), Positives = 198/467 (42%), Gaps = 77/467 (16%)
Query: 6 STLTKPFHSDHCCRLASLVDTCKSIQQIKQTHAQLVTTALISH-HVSANKFLKLVADASL 64
+ T PF + C RLA V C+ + HA L+ + S V V S+
Sbjct: 51 NNFTFPFVAKACARLAD-VGCCEMV------HAHLIKSPFWSDVFVGTATVDMFVKCNSV 103
Query: 65 SYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFG 124
YA K+F+++P+ D +N M+ S + + + +FR + R + ++P+ + +
Sbjct: 104 DYAAKVFERMPERDATTWNAMLSGFCQSGHT-DKAFSLFREM-RLNEITPDSVTVMTLIQ 161
Query: 125 ACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYS 184
+ S++ E + + +++G+D V V N I YGK G ++ + VFE A+D+
Sbjct: 162 SASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFE-AIDRG--- 217
Query: 185 WNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGP 244
++ VVSW+++ Y G +A + ML+
Sbjct: 218 -------------------------DRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEF 252
Query: 245 KPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASR 304
KP+ TF++ A+C N L QG+ IHS + + + I MY+K + SA R
Sbjct: 253 KPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSA-R 311
Query: 305 VFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGY 364
+ ++ R W MI G+A G EA+ +F M P+ VT ++L++ C
Sbjct: 312 LLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFG 371
Query: 365 MVEEGKLYFRLMVSDYGIIPEIEHYGC----------MVDLLSRAGLLKEAEDMISSMP- 413
+E GK I + YGC ++D+ S+ G + EA D+ + P
Sbjct: 372 SLETGKW----------IDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPE 421
Query: 414 --------MAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHV 452
M A+ G L A +++ M I + PNH+
Sbjct: 422 KTVVTWTTMIAGYALNGIFLEALKLFSKM--------IDLDYKPNHI 460
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/444 (23%), Positives = 182/444 (40%), Gaps = 72/444 (16%)
Query: 98 DSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNAL 157
+SL++FR + R G PN ++F F AC V E V +H +K S+VFV A
Sbjct: 35 ESLLLFREMKR-GGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTAT 93
Query: 158 IGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWS 217
+ M+ K V+Y KVFE ++D +WN M++ + SG+ +A LF EM+ ++ S
Sbjct: 94 VDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDS 153
Query: 218 TIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRG 277
+ +Q F ++L M VG + V +N WI +
Sbjct: 154 VTVMTLIQSASFEKSLKLLEAMHAVGIRLG----VDVQVTVAN-------TWIST----- 197
Query: 278 EIKMNERLLASIIDMYAKCGEIESASRVFWE-HNAKRKVWPWNAMIGGFAMHGKPSEAIK 336
Y KCG+++SA VF R V WN+M +++ G+ +A
Sbjct: 198 ---------------YGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFG 242
Query: 337 VFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLL 396
++ M E P+ TF+ L +C + + +G+L + G +IE + +
Sbjct: 243 LYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIH-LGTDQDIEAINTFISMY 301
Query: 397 SRA-------------------------------GLLKEAEDMISSMPMA---PDVAIWG 422
S++ G + EA + +M + PD+
Sbjct: 302 SKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLL 361
Query: 423 AVLNACRIYKDMERGYRI---GRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSE 479
++++ C + +E G I I N + C+ L+ ++YS G ++AR + + +
Sbjct: 362 SLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALI-DMYSKCGSIHEARDIFDNTP 420
Query: 480 ISTATKKIPGCSSIELNGTFYQFL 503
T + LNG F + L
Sbjct: 421 EKTVVTWTTMIAGYALNGIFLEAL 444
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 144/332 (43%), Gaps = 42/332 (12%)
Query: 4 FCSTLTKPFHSDHCCRLASLVDTCKSIQQIKQ---THAQLVTTALISHHVSANKFLKLVA 60
+C L + F D +L +C++ + + Q H+ + + N F+ + +
Sbjct: 244 YCLMLREEFKPD-LSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYS 302
Query: 61 DASLS-YAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSF 119
+ + A LFD + + MI ++ +++L +F + + SG P+ +
Sbjct: 303 KSEDTCSARLLFDIMTSRTCVSWTVMISGYA-EKGDMDEALALFHAMIK-SGEKPDLVTL 360
Query: 120 VFTFGACGNGLSVQEGEQVRSHAVKVGLD-SNVFVVNALIGMYGKWGLVEYGRKVFEWAV 178
+ CG S++ G+ + + A G NV + NALI MY K G + R +F+
Sbjct: 361 LSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTP 420
Query: 179 DKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHR 238
+K + +W TMIA Y +G F+EAL F +
Sbjct: 421 EKTVVTWTTMIAGYALNG-------------------------------IFLEALKLFSK 449
Query: 239 MLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERL--LASIIDMYAKC 296
M+ + KPN TF++ L AC++ +L++G W + I + ++ L + ++D+ +
Sbjct: 450 MIDLDYKPNHITFLAVLQACAHSGSLEKG-WEYFHIMKQVYNISPGLDHYSCMVDLLGRK 508
Query: 297 GEIESASRVFWEHNAKRKVWPWNAMIGGFAMH 328
G++E A + +AK W A++ +H
Sbjct: 509 GKLEEALELIRNMSAKPDAGIWGALLNACKIH 540
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 78/149 (52%), Gaps = 1/149 (0%)
Query: 213 VVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHS 272
V +W+ I V +E+L F M + G +PN +TF AC+ L + + +H+
Sbjct: 17 VNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHA 76
Query: 273 FIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPS 332
+ + + + + +DM+ KC ++ A++VF E +R WNAM+ GF G
Sbjct: 77 HLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVF-ERMPERDATTWNAMLSGFCQSGHTD 135
Query: 333 EAIKVFQKMKVENVSPNKVTFVALLNACS 361
+A +F++M++ ++P+ VT + L+ + S
Sbjct: 136 KAFSLFREMRLNEITPDSVTVMTLIQSAS 164
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 159/520 (30%), Positives = 269/520 (51%), Gaps = 41/520 (7%)
Query: 20 LASLVDTCKSIQQIKQ---THAQLVTTALISHHVSANKFLKLVADASLSY--AHKLFDQI 74
L+S++ +C++++ + H +V + N + + A S++ A +F I
Sbjct: 114 LSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDI 173
Query: 75 PQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQE 134
+ + T+I + M ++L ++ ++P Y A + SV
Sbjct: 174 KVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTP--YCITIAVRASASIDSVTT 231
Query: 135 GEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVG 194
G+Q+ + +K G SN+ V+N+++ +Y + G
Sbjct: 232 GKQIHASVIKRGFQSNLPVMNSILDLYCRCGY---------------------------- 263
Query: 195 SGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSA 254
+S+AK F EM+++D+++W+T+I+ ++ EAL F R G PN YTF S
Sbjct: 264 ---LSEAKHYFHEMEDKDLITWNTLIS-ELERSDSSEALLMFQRFESQGFVPNCYTFTSL 319
Query: 255 LAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRK 314
+AAC+N+ AL+ G+ +H I R N L ++IDMYAKCG I + RVF E +R
Sbjct: 320 VAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRN 379
Query: 315 VWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFR 374
+ W +M+ G+ HG +EA+++F KM + P+++ F+A+L+AC H +VE+G YF
Sbjct: 380 LVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFN 439
Query: 375 LMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDM 434
+M S+YGI P+ + Y C+VDLL RAG + EA +++ MP PD + WGA+L AC+ +K
Sbjct: 440 VMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHN 499
Query: 435 ERGYRI-GRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSI 493
R+ R + E+ P VG +V+L IY++ G+W D +R+ + KK G S I
Sbjct: 500 GLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRM-MGNKKEAGMSWI 558
Query: 494 ELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVP 533
+ + F V D+ P + +YS L + + + AGYVP
Sbjct: 559 LVENQVFSFAVSDKMCPNASSVYSVLGLLIEETREAGYVP 598
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 114/241 (47%), Gaps = 4/241 (1%)
Query: 187 TMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKP 246
+I +Y G + +A+ LFDEM ++DVV+W+ +I GY A + FH M++ G P
Sbjct: 50 NLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSP 109
Query: 247 NEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCG-EIESASRV 305
NE+T S L +C N+ L G +H + + ++ + + ++++MYA C +E+A +
Sbjct: 110 NEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLI 169
Query: 306 FWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYM 365
F + K V W +I GF G +K++++M +EN + A +
Sbjct: 170 FRDIKVKNDV-TWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDS 228
Query: 366 VEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVL 425
V GK V G + ++DL R G L EA+ M D+ W ++
Sbjct: 229 VTTGK-QIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEME-DKDLITWNTLI 286
Query: 426 N 426
+
Sbjct: 287 S 287
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 258 bits (660), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 159/516 (30%), Positives = 271/516 (52%), Gaps = 53/516 (10%)
Query: 28 KSIQQIKQTHAQLVTTALISHHVSANKFL-KLVADA-----SLSYAHKLFDQIPQPDLFI 81
++++ KQ H + + H +S + FL + DA +S A +F Q D+ +
Sbjct: 354 ENLEYCKQIHCYI-----MRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVV 408
Query: 82 YNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSH 141
+ MI + L DSL +FR L + +SPN + V G L+++ G ++
Sbjct: 409 FTAMISGY-LHNGLYIDSLEMFRWLVK-VKISPNEITLVSILPVIGILLALKLGRELHGF 466
Query: 142 AVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQA 201
+K G D+ + A+I MY K G M+ A
Sbjct: 467 IIKKGFDNRCNIGCAVIDMYAK-------------------------------CGRMNLA 495
Query: 202 KELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNL 261
E+F+ + ++D+VSW+++I Q A+D F +M G + + +AL+AC+NL
Sbjct: 496 YEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANL 555
Query: 262 VALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAM 321
+ GK IH F+ + + + +++IDMYAKCG +++A VF K V WN++
Sbjct: 556 PSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIV-SWNSI 614
Query: 322 IGGFAMHGKPSEAIKVFQKM-KVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDY 380
I HGK +++ +F +M + + P+++TF+ ++++C H V+EG +FR M DY
Sbjct: 615 IAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDY 674
Query: 381 GIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRI 440
GI P+ EHY C+VDL RAG L EA + + SMP PD +WG +L ACR++K++E
Sbjct: 675 GIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVA 734
Query: 441 GRIIKEMDPNHVGCHVLLGNIYSSSGRWND---ARMLREKSEISTATKKIPGCSSIELNG 497
+ ++DP++ G +VL+ N ++++ W R L ++ E+ +KIPG S IE+N
Sbjct: 735 SSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREV----QKIPGYSWIEINK 790
Query: 498 TFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVP 533
+ F+ GD +HP+S +YS L+ + +L++ GY+P
Sbjct: 791 RTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGYIP 826
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 187/424 (44%), Gaps = 68/424 (16%)
Query: 23 LVDTCKSIQQIKQTHAQLVTTALISHHVSANKFL-KLVADASLSYAH-----KLFDQIPQ 76
LV C +++ K ++ + S + N+F+ + A L Y KLFD++ Q
Sbjct: 144 LVKACVALKNFKGI--DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQ 201
Query: 77 PDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGE 136
D I+N M+ ++ DS++ + R +SPN +F C + L + G
Sbjct: 202 KDCVIWNVMLNGYA--KCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGV 259
Query: 137 QVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSG 196
Q+ V G+D + N+L+ MY K G
Sbjct: 260 QLHGLVVVSGVDFEGSIKNSLLSMYSK-------------------------------CG 288
Query: 197 NMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALA 256
A +LF M D V+W+ +I+GYVQ G E+L FF+ M+ G P+ TF S L
Sbjct: 289 RFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLP 348
Query: 257 ACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVW 316
+ S L+ K IH +I R I ++ L +++ID Y KC + A +F + N+ V
Sbjct: 349 SVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSV-DVV 407
Query: 317 PWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACS-----------HGYM 365
+ AMI G+ +G +++++F+ + +SPN++T V++L HG++
Sbjct: 408 VFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFI 467
Query: 366 VEEGKLYFRLMVSDYGIIPEIEHYGC-MVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAV 424
+++G + GC ++D+ ++ G + A ++ + D+ W ++
Sbjct: 468 IKKG-------------FDNRCNIGCAVIDMYAKCGRMNLAYEIFERLS-KRDIVSWNSM 513
Query: 425 LNAC 428
+ C
Sbjct: 514 ITRC 517
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 146/317 (46%), Gaps = 40/317 (12%)
Query: 114 PNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKV 173
P R S + AC N +++G+QV HA +VN++ G
Sbjct: 35 PRRLSLLLQ--ACSNPNLLRQGKQV--HAF--------LIVNSISG-------------- 68
Query: 174 FEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFD--EMQEQDVVSWSTIIAGYVQVGCFME 231
D Y+ ++ Y G+ S ++F +++ + W++II+ +V+ G +
Sbjct: 69 -------DSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQ 121
Query: 232 ALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIID 291
AL F+ +ML G P+ TF + AC L ++ + + NE + +S+I
Sbjct: 122 ALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIK 181
Query: 292 MYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKV 351
Y + G+I+ S++F + ++ WN M+ G+A G IK F M+++ +SPN V
Sbjct: 182 AYLEYGKIDVPSKLF-DRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAV 240
Query: 352 TFVALLNACSHGYMVEEG-KLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMIS 410
TF +L+ C+ +++ G +L+ ++VS G+ E ++ + S+ G +A +
Sbjct: 241 TFDCVLSVCASKLLIDLGVQLHGLVVVS--GVDFEGSIKNSLLSMYSKCGRFDDASKLFR 298
Query: 411 SMPMAPDVAIWGAVLNA 427
M A D W +++
Sbjct: 299 MMSRA-DTVTWNCMISG 314
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 154/513 (30%), Positives = 266/513 (51%), Gaps = 41/513 (7%)
Query: 21 ASLVDTCKSIQQI---KQTHAQLVTTALISHHVSANKFLKLVADAS-LSYAHKLFDQIPQ 76
+S++ +C S+ + Q HA + L + N + + A L+ A K+FD
Sbjct: 354 SSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAA 413
Query: 77 PDLFIYNTMIKAHSLSPSS--CNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQE 134
D+ ++N MI+ +S + +++L +FR + R + P+ +FV A + S+
Sbjct: 414 ADVVLFNAMIEGYSRLGTQWELHEALNIFRDM-RFRLIRPSLLTFVSLLRASASLTSLGL 472
Query: 135 GEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVG 194
+Q+ K GL+ ++F +AL I Y
Sbjct: 473 SKQIHGLMFKYGLNLDIFAGSAL-------------------------------IDVYSN 501
Query: 195 SGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSA 254
+ ++ +FDEM+ +D+V W+++ AGYVQ EAL+ F + +P+E+TF +
Sbjct: 502 CYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANM 561
Query: 255 LAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRK 314
+ A NL ++ G+ H + + ++ N + +++DMYAKCG E A + F + A R
Sbjct: 562 VTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAF-DSAASRD 620
Query: 315 VWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFR 374
V WN++I +A HG+ +A+++ +KM E + PN +TFV +L+ACSH +VE+G F
Sbjct: 621 VVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFE 680
Query: 375 LMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDM 434
LM+ +GI PE EHY CMV LL RAG L +A ++I MP P +W ++L+ C ++
Sbjct: 681 LMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNV 739
Query: 435 ERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIE 494
E + DP G +L NIY+S G W +A+ +RE+ ++ K+ PG S I
Sbjct: 740 ELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKE-PGRSWIG 798
Query: 495 LNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLK 527
+N + FL D+SH ++ ++Y LD++ +++
Sbjct: 799 INKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 178/370 (48%), Gaps = 39/370 (10%)
Query: 59 VADASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYS 118
+ D ++ YA +FD +P+ + TMI + SL +F L D+ + P+ Y
Sbjct: 194 LKDGNIDYARLVFDALPEKSTVTWTTMISG-CVKMGRSYVSLQLFYQLMEDN-VVPDGYI 251
Query: 119 FVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAV 178
AC ++ G+Q+ +H ++ GL+ + ++N LI
Sbjct: 252 LSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLID------------------- 292
Query: 179 DKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHR 238
+YV G + A +LF+ M ++++SW+T+++GY Q EA++ F
Sbjct: 293 ------------SYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTS 340
Query: 239 MLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGE 298
M + G KP+ Y S L +C++L AL G +H++ + + + + S+IDMYAKC
Sbjct: 341 MSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDC 400
Query: 299 IESASRVFWEHNAKRKVWPWNAMIGGFAMHG---KPSEAIKVFQKMKVENVSPNKVTFVA 355
+ A +VF + A V +NAMI G++ G + EA+ +F+ M+ + P+ +TFV+
Sbjct: 401 LTDARKVF-DIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVS 459
Query: 356 LLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMA 415
LL A + + K LM YG+ +I ++D+ S LK++ + M +
Sbjct: 460 LLRASASLTSLGLSKQIHGLMFK-YGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKV- 517
Query: 416 PDVAIWGAVL 425
D+ IW ++
Sbjct: 518 KDLVIWNSMF 527
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/423 (24%), Positives = 191/423 (45%), Gaps = 67/423 (15%)
Query: 36 THAQLVTTALISHHVSANKFLKLVADAS-LSYAHKLFDQIPQPDLFIYNTMIKAHSLSPS 94
H Q++ L +N + L + A + YA K+F+++P+ +L ++TM+ S
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMV-------S 118
Query: 95 SCN------DSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLD 148
+CN +SL+VF R SPN Y AC GLD
Sbjct: 119 ACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACS------------------GLD 160
Query: 149 SNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEM 208
G+W + + + + D+D+Y +I Y+ GN+ A+ +FD +
Sbjct: 161 GR-----------GRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDAL 209
Query: 209 QEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGK 268
E+ V+W+T+I+G V++G +L F+++++ P+ Y + L+ACS L L+ GK
Sbjct: 210 PEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGK 269
Query: 269 WIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMH 328
IH+ I R ++M+ L+ +ID Y KCG + +A ++F + + W ++ G+ +
Sbjct: 270 QIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLF-NGMPNKNIISWTTLLSGYKQN 328
Query: 329 GKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEH 388
EA+++F M + P+ ++L +C+ + L F V Y I + +
Sbjct: 329 ALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLH-----ALGFGTQVHAYTIKANLGN 383
Query: 389 ----YGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVL-------------NACRIY 431
++D+ ++ L +A + A DV ++ A++ A I+
Sbjct: 384 DSYVTNSLIDMYAKCDCLTDARKVFDIFA-AADVVLFNAMIEGYSRLGTQWELHEALNIF 442
Query: 432 KDM 434
+DM
Sbjct: 443 RDM 445
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 98/426 (23%), Positives = 196/426 (46%), Gaps = 44/426 (10%)
Query: 34 KQTHAQLVTTALISHHVSANKFL-KLVADASLSYAHKLFDQIPQPDLFIYNTMIKAHSLS 92
KQ HA ++ L N + V + AHKLF+ +P ++ + T++ + +
Sbjct: 269 KQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQN 328
Query: 93 PSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVF 152
+++ +F +++ GL P+ Y+ +C + ++ G QV ++ +K L ++ +
Sbjct: 329 ALH-KEAMELFTSMSK-FGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSY 386
Query: 153 VVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQD 212
V N+LI MY K + RKVF+ D+ +N MI Y G
Sbjct: 387 VTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLG---------------- 430
Query: 213 VVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHS 272
W EAL+ F M +P+ TFVS L A ++L +L K IH
Sbjct: 431 -TQWE-----------LHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHG 478
Query: 273 FIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPS 332
+ + + ++ +++ID+Y+ C ++ + VF E K V WN+M G+ +
Sbjct: 479 LMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLV-IWNSMFAGYVQQSENE 537
Query: 333 EAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGK-LYFRLMVSDYGIIPEIEHYGC 391
EA+ +F ++++ P++ TF ++ A + V+ G+ + +L+ P I +
Sbjct: 538 EALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITN--A 595
Query: 392 MVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEM---- 447
++D+ ++ G ++A S + DV W +V+++ Y + G + +++++M
Sbjct: 596 LLDMYAKCGSPEDAHKAFDS-AASRDVVCWNSVISS---YANHGEGKKALQMLEKMMSEG 651
Query: 448 -DPNHV 452
+PN++
Sbjct: 652 IEPNYI 657
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 256 bits (654), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 159/556 (28%), Positives = 275/556 (49%), Gaps = 52/556 (9%)
Query: 18 CRLASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVADAS-LSYAHKLFDQIPQ 76
CR C++ H Q++ L + N+ L L A + A+ LF ++P
Sbjct: 168 CRYLGRFGLCRAF------HTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPV 221
Query: 77 PDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRD--------------------------- 109
+ +N MIK S C ++ +F + R+
Sbjct: 222 RNRMSWNVMIKGFS-QEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLK 280
Query: 110 -------SGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYG 162
SG + + + F C ++ E+V + +K G + + NALI +YG
Sbjct: 281 YFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYG 340
Query: 163 KWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQD--------VV 214
K G V+ +F +K + SWN++I ++V +G + +A LF E++E + VV
Sbjct: 341 KQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVV 400
Query: 215 SWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFI 274
+W+++I G G ++L++F +M N T L+ C+ L AL+ G+ IH +
Sbjct: 401 TWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHV 460
Query: 275 GRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEA 334
R + N + ++++MYAKCG + S VF E + + WN++I G+ MHG +A
Sbjct: 461 IRTSMSENILVQNALVNMYAKCGLLSEGSLVF-EAIRDKDLISWNSIIKGYGMHGFAEKA 519
Query: 335 IKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVD 394
+ +F +M P+ + VA+L+ACSH +VE+G+ F M +G+ P+ EHY C+VD
Sbjct: 520 LSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVD 579
Query: 395 LLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGC 454
LL R G LKEA +++ +MPM P V + GA+LN+CR++K+++ I + ++P G
Sbjct: 580 LLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGS 639
Query: 455 HVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSRE 514
++LL NIYS+ GRW ++ +R ++ KK+ G S IE+ Y+F G +
Sbjct: 640 YMLLSNIYSAGGRWEESANVRALAK-KKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFET 698
Query: 515 LYSFLDEMTTKLKIAG 530
+Y L+++ + + G
Sbjct: 699 IYPVLEDLVSHMLKKG 714
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 176/367 (47%), Gaps = 16/367 (4%)
Query: 23 LVDTCKSIQQIKQTHAQLVTTALI--SHHVSANKFLKLVADASLSYAHKLFDQIPQ---P 77
L+ C + QQ +Q HAQ++ + I S ++AN L A +F+ +
Sbjct: 62 LLGLCLTAQQCRQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLS 121
Query: 78 DLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQ 137
DL ++N+++KA+ +S ++L ++R + R GL+ + Y AC
Sbjct: 122 DLRLWNSILKAN-VSHGLYENALELYRGM-RQRGLTGDGYILPLILRACRYLGRFGLCRA 179
Query: 138 VRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGN 197
+ +++GL N+ VVN L+ +Y K G + +F ++ SWN MI + +
Sbjct: 180 FHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYD 239
Query: 198 MSQAKELFDEMQEQ----DVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVS 253
A ++F+ MQ + D V+W+++++ + Q G F + L +FH M G +
Sbjct: 240 CESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAV 299
Query: 254 ALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKR 313
+ C+ L AL + +H ++ +G + ++I +Y K G+++ A +F + K
Sbjct: 300 FFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNK- 358
Query: 314 KVWPWNAMIGGFAMHGKPSEAIKVFQKMK----VENVSPNKVTFVALLNACSHGYMVEEG 369
+ WN++I F GK EA+ +F +++ V NV N VT+ +++ C+ ++
Sbjct: 359 GIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDS 418
Query: 370 KLYFRLM 376
YFR M
Sbjct: 419 LEYFRQM 425
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 254 bits (650), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 160/491 (32%), Positives = 260/491 (52%), Gaps = 16/491 (3%)
Query: 20 LASLVDTCKSIQQIK---QTHAQLVTTALISHHVSANKFLKLVADAS-LSYAHKLFDQIP 75
L+ ++ C + +K Q H L T L S N + L L + ++FD++P
Sbjct: 124 LSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMP 183
Query: 76 QPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLS-VQE 134
+ D YN+MI + C + L L P + ++ + +G + +
Sbjct: 184 KRDSVSYNSMIDGYV----KCGLIVSARELFD----LMPMEMKNLISWNSMISGYAQTSD 235
Query: 135 GEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVG 194
G + S + ++ N++I Y K G +E + +F+ +D+ +W TMI Y
Sbjct: 236 GVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAK 295
Query: 195 SGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPK-PNEYTFVS 253
G + AK LFD+M +DVV++++++AGYVQ MEAL+ F M + P++ T V
Sbjct: 296 LGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVI 355
Query: 254 ALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKR 313
L A + L L + +H +I + + +L ++IDMY+KCG I+ A VF E +
Sbjct: 356 VLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVF-EGIENK 414
Query: 314 KVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYF 373
+ WNAMIGG A+HG A + +++ ++ P+ +TFV +LNACSH +V+EG L F
Sbjct: 415 SIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCF 474
Query: 374 RLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKD 433
LM + I P ++HYGCMVD+LSR+G ++ A+++I MP+ P+ IW L AC +K+
Sbjct: 475 ELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKE 534
Query: 434 MERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSI 493
E G + + + + +VLL N+Y+S G W D R +R + +KIPGCS I
Sbjct: 535 FETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMK-ERKIEKIPGCSWI 593
Query: 494 ELNGTFYQFLV 504
EL+G ++F V
Sbjct: 594 ELDGRVHEFFV 604
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 143/457 (31%), Positives = 245/457 (53%), Gaps = 36/457 (7%)
Query: 64 LSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTF 123
L A ++F ++P+ L +N+MIK + S + ++ R++ G P++ +
Sbjct: 259 LEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIE--GTRPSQTTLTSIL 316
Query: 124 GACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLY 183
AC ++ G+ + + ++ ++++++V +LI +Y K
Sbjct: 317 MACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFK-------------------- 356
Query: 184 SWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVG 243
G N+ A+ +F + Q+ SW+ +I+ Y+ VG + +A++ + +M+ VG
Sbjct: 357 ---------CGEANL--AETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVG 405
Query: 244 PKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESAS 303
KP+ TF S L ACS L AL++GK IH I ++ +E LL++++DMY+KCG + A
Sbjct: 406 VKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAF 465
Query: 304 RVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHG 363
R+F K+ V W MI + HG+P EA+ F +M+ + P+ VT +A+L+AC H
Sbjct: 466 RIF-NSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHA 524
Query: 364 YMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVA-IWG 422
+++EG +F M S YGI P IEHY CM+D+L RAG L EA ++I P D A +
Sbjct: 525 GLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLS 584
Query: 423 AVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEIST 482
+ +AC ++ + G RI R++ E P+ +++L N+Y+S W+ AR +R K +
Sbjct: 585 TLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMK-EM 643
Query: 483 ATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFL 519
+K PGCS IE++ F DRSH ++ +Y L
Sbjct: 644 GLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECL 680
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 131/499 (26%), Positives = 230/499 (46%), Gaps = 85/499 (17%)
Query: 19 RLASLVDTC----KSIQQIKQTHAQLVTTALISHHVSA----NKFLKLVADASLSYAHKL 70
+L SL+ C KS+++IK H +++T L V N + S + +
Sbjct: 5 KLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFEN 64
Query: 71 FDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSF---VFTFGACG 127
FD + D++I+N+++ +S S +D+L VF+ L S P+ ++F + +GA G
Sbjct: 65 FD--IRSDVYIWNSLMSGYS-KNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALG 121
Query: 128 NGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNT 187
G + + VK G +V V ++L+GMY K+ L E
Sbjct: 122 REFL---GRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFE------------------- 159
Query: 188 MIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPN 247
+ ++FDEM E+DV SW+T+I+ + Q G +AL+ F RM G +PN
Sbjct: 160 ------------NSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPN 207
Query: 248 EYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFW 307
+ A++ACS L+ L++GK IH + +++E + ++++DMY KC +E A VF
Sbjct: 208 SVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVF- 266
Query: 308 EHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACS------ 361
+ ++ + WN+MI G+ G +++ +M +E P++ T ++L ACS
Sbjct: 267 QKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLL 326
Query: 362 -----HGYMVEEG------------KLYFRLMVSDYGII-------PEIEHYGCMV-DLL 396
HGY++ LYF+ ++ E + M+ +
Sbjct: 327 HGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYI 386
Query: 397 SRAGLLKEAE--DMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKE--MDPNHV 452
S K E D + S+ + PDV + +VL AC +E+G +I I E ++ + +
Sbjct: 387 SVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDEL 446
Query: 453 GCHVLLGNIYSSSGRWNDA 471
LL ++YS G +A
Sbjct: 447 LLSALL-DMYSKCGNEKEA 464
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 148/419 (35%), Positives = 235/419 (56%), Gaps = 15/419 (3%)
Query: 81 IYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRS 140
+YNT+I+++ L+ SL +F + S + PN +F A + SV G +
Sbjct: 53 VYNTLIRSY-LTTGEYKTSLALFTHMLA-SHVQPNNLTFPSLIKAACSSFSVSYGVALHG 110
Query: 141 HAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQ 200
A+K G + FV + + YG+ G +E RK+F+ ++ + + N+++ A +G M
Sbjct: 111 QALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDY 170
Query: 201 AKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQ---VGPKPNEYTFVSALAA 257
A E F M DVVSW+T+I G+ + G +AL F M+Q PNE TFVS L++
Sbjct: 171 AFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSS 230
Query: 258 CSNLVALDQG-----KWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAK 312
C+N DQG K IH ++ EI + L +++DMY K G++E A +F +
Sbjct: 231 CANF---DQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIF-DQIRD 286
Query: 313 RKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLY 372
+KV WNA+I A +G+P +A+++F+ MK V PN +T +A+L AC+ +V+ G
Sbjct: 287 KKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQL 346
Query: 373 FRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYK 432
F + S+Y IIP EHYGC+VDL+ RAGLL +A + I S+P PD ++ GA+L AC+I++
Sbjct: 347 FSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHE 406
Query: 433 DMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCS 491
+ E G +G+ + + P H G +V L + W++A +R K+ I +KIP S
Sbjct: 407 NTELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMR-KAMIEAGIRKIPAYS 464
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 251 bits (642), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 156/531 (29%), Positives = 262/531 (49%), Gaps = 67/531 (12%)
Query: 20 LASLVDTCKSIQQIKQTHAQLVTTALISHH--VSANKFLKLVADASLSYAHKLFDQIPQP 77
L +L CKS + Q HA+++ L +S + +SLSY+ +F+++P P
Sbjct: 13 LETLFKLCKSEIHLNQIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERVPSP 72
Query: 78 DLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQ 137
+++N +IK +S + +++ + + R P+ Y+F C N V+ G
Sbjct: 73 GTYLWNHLIKGYS-NKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSS 131
Query: 138 VRSHAVKVGLDSNVFVVNALIGMYGK---------------------W----------GL 166
V +++G D +V V + + YGK W G
Sbjct: 132 VHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGE 191
Query: 167 VEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVS----------- 215
+E + +F+ +++L SWN ++ V SG++ AK+LFDEM ++D++S
Sbjct: 192 LEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKG 251
Query: 216 --------------------WSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSAL 255
WS +I GY Q G EA F M KP+E+ V +
Sbjct: 252 GDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLM 311
Query: 256 AACSNLVALDQGKWIHSFIGRGEIKMNER-LLASIIDMYAKCGEIESASRVFWEHNAKRK 314
+ACS + + + + S++ + K + ++ ++IDM AKCG ++ A+++F E +R
Sbjct: 312 SACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLF-EEMPQRD 370
Query: 315 VWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFR 374
+ + +M+ G A+HG SEAI++F+KM E + P++V F +L C +VEEG YF
Sbjct: 371 LVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFE 430
Query: 375 LMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDM 434
LM Y I+ +HY C+V+LLSR G LKEA ++I SMP + WG++L C ++ +
Sbjct: 431 LMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNT 490
Query: 435 ERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATK 485
E + R + E++P G +VLL NIY++ RW D LR+K + TK
Sbjct: 491 EIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITK 541
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 251 bits (640), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 161/501 (32%), Positives = 256/501 (51%), Gaps = 44/501 (8%)
Query: 27 CKSIQQIKQTHAQLVTTALISHHVSANKFLK---LVADASLSYAHKLFDQIPQPDLFIYN 83
C SI+ + Q H Q+ ++L + ++ ++ L L++A L +N
Sbjct: 23 CSSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWN 82
Query: 84 TMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAV 143
+ + +S S S +S+ V+ + R G+ PN+ +F F AC + L + G Q++ +
Sbjct: 83 MLSRGYSSSDSPV-ESIWVYSEMKR-RGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVL 140
Query: 144 KVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKE 203
K G D +V+V N +I Y S A++
Sbjct: 141 KHGFDFDVYV-------------------------------GNNLIHLYGTCKKTSDARK 169
Query: 204 LFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVA 263
+FDEM E++VVSW++I+ V+ G + F M+ P+E T V L+AC ++
Sbjct: 170 VFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACGGNLS 229
Query: 264 LDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIG 323
L GK +HS + E+++N RL +++DMYAK G +E A VF E + VW W+AMI
Sbjct: 230 L--GKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVF-ERMVDKNVWTWSAMIV 286
Query: 324 GFAMHGKPSEAIKVFQKM-KVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGI 382
G A +G EA+++F KM K +V PN VTF+ +L ACSH +V++G YF M + I
Sbjct: 287 GLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKI 346
Query: 383 IPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMER---GYR 439
P + HYG MVD+L RAG L EA D I MP PD +W +L+AC I+ D + G +
Sbjct: 347 KPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEK 406
Query: 440 IGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNGTF 499
+ + + E++P G V++ N ++ + W +A +R + T KKI G S +EL G+F
Sbjct: 407 VKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMK-ETKMKKIAGESCLELGGSF 465
Query: 500 YQFLVGDRSHPQSRELYSFLD 520
++F G + +Y LD
Sbjct: 466 HRFFSGYDPRSEYVSIYELLD 486
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 251 bits (640), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 153/474 (32%), Positives = 256/474 (54%), Gaps = 39/474 (8%)
Query: 28 KSIQQIKQTHAQLVTTAL-ISHHVSANKFLKLVADASLSYAHKLFDQIPQPDLFIYNTMI 86
+ IQ H +V T ++ +VS + ++Y ++F+ IPQ ++ + ++I
Sbjct: 121 RDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLI 180
Query: 87 KAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVG 146
++ + +D++ FR + + +G+ N V ACG + G+ +G
Sbjct: 181 SGF-VNNNRFSDAIEAFREM-QSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLG 238
Query: 147 LDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFD 206
D F+ V ++ ++I Y G++ A+ LFD
Sbjct: 239 FDP-----------------------YFQSKVGFNVILATSLIDMYAKCGDLRTARYLFD 275
Query: 207 EMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAA-----CSNL 261
M E+ +VSW++II GY Q G EAL F ML +G P++ TF+S + A CS L
Sbjct: 276 GMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQL 335
Query: 262 VALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAM 321
G+ IH+++ + + ++ ++++MYAK G+ ESA + F E K+ W +
Sbjct: 336 -----GQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAF-EDLEKKDTIAWTVV 389
Query: 322 IGGFAMHGKPSEAIKVFQKMKVE-NVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDY 380
I G A HG +EA+ +FQ+M+ + N +P+ +T++ +L ACSH +VEEG+ YF M +
Sbjct: 390 IIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLH 449
Query: 381 GIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRI 440
G+ P +EHYGCMVD+LSRAG +EAE ++ +MP+ P+V IWGA+LN C I++++E RI
Sbjct: 450 GLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRI 509
Query: 441 GRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIE 494
++ E + G +VLL NIY+ +GRW D +++RE + S K+ G SS+E
Sbjct: 510 RSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMK-SKRVDKVLGHSSVE 562
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 131/507 (25%), Positives = 225/507 (44%), Gaps = 90/507 (17%)
Query: 20 LASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVADA----SLSYAHKLFDQIP 75
+ S ++ C+S+ ++ Q H ++ +++I + + ++ + +LSYA +F+ I
Sbjct: 9 ILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESID 68
Query: 76 QPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEG 135
P ++I+N+MI+ +S SP+ D ++F G SP+ ++F + AC +Q G
Sbjct: 69 CPSVYIWNSMIRGYSNSPNP--DKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFG 126
Query: 136 EQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGS 195
V VK G + N++V L+ MY G V YG +VFE ++ +W ++I+ +V +
Sbjct: 127 SCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNN 186
Query: 196 GNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSAL 255
S A E F EMQ G K NE V L
Sbjct: 187 NRFSDAIEAFREMQSN-------------------------------GVKANETIMVDLL 215
Query: 256 AACSNLVALDQGKWIHSFI-GRG-------EIKMNERLLASIIDMYAKCGEIESASRVFW 307
AC + GKW H F+ G G ++ N L S+IDMYAKCG++ +A R +
Sbjct: 216 VACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTA-RYLF 274
Query: 308 EHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVE 367
+ +R + WN++I G++ +G EA+ +F M ++P+KVTF++++ A +
Sbjct: 275 DGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQ 334
Query: 368 EGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEA----EDMISSMPMA-------- 415
G+ VS G + + +V++ ++ G + A ED+ +A
Sbjct: 335 LGQ-SIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGL 393
Query: 416 -----------------------PDVAIWGAVLNACRIYKDMERGYRI---GRIIKEMDP 449
PD + VL AC +E G R R + ++P
Sbjct: 394 ASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEP 453
Query: 450 N--HVGCHVLLGNIYSSSGRWNDARML 474
H GC V +I S +GR+ +A L
Sbjct: 454 TVEHYGCMV---DILSRAGRFEEAERL 477
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 149/468 (31%), Positives = 246/468 (52%), Gaps = 13/468 (2%)
Query: 67 AHKLFDQIPQPDLFIYNTMIK--AHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFG 124
A +F ++P+ F +N MI AH SC L +F+ + +S P+ Y+F
Sbjct: 157 ALDVFVEMPKRVAFAWNIMISGHAHCGKLESC---LSLFKEML-ESEFKPDCYTFSSLMN 212
Query: 125 AC-GNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLY 183
AC + +V G V + +K G S V N+++ Y K G + + E
Sbjct: 213 ACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQV 272
Query: 184 SWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVG 243
SWN++I A + G +A E+F E+++V+W+T+I GY + G +AL FF M++ G
Sbjct: 273 SWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSG 332
Query: 244 PKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESAS 303
+ + + + L ACS L L GK IH + + + +++++YAKCG+I+ A
Sbjct: 333 VDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEAD 392
Query: 304 RVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHG 363
R F + A + + WN M+ F +HG +A+K++ M + P+ VTF+ LL CSH
Sbjct: 393 RAFGDI-ANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHS 451
Query: 364 YMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISS----MPMAPDVA 419
+VEEG + F MV DY I E++H CM+D+ R G L EA+D+ ++ + + + +
Sbjct: 452 GLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNS 511
Query: 420 IWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSE 479
W +L AC + E G + +++K +P+ VLL N+Y S+GRW + +R +
Sbjct: 512 SWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVR-REM 570
Query: 480 ISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLK 527
+ KK PGCS IE+ F+VGD SHP+ EL L+ + +++
Sbjct: 571 VERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEELSETLNCLQHEMR 618
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 113/430 (26%), Positives = 198/430 (46%), Gaps = 57/430 (13%)
Query: 53 NKFLKLVADASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGL 112
+K L ++ A ++FD +P+ D +NTM+ ++S +++ +F L R S
Sbjct: 9 SKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYS-RLGLHQEAIALFTQL-RFSDA 66
Query: 113 SPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRK 172
P+ YSF C + +V+ G +++S ++ G +++ V N+LI MYGK K
Sbjct: 67 KPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANK 126
Query: 173 VF-EWAVD-KDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFM 230
VF + D ++ +W +++ AY+ + A ++F EM ++ +W+ +I+G+ G
Sbjct: 127 VFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLE 186
Query: 231 EALDFFHRMLQVGPKPNEYTFVSALAAC----SNLV----------------ALDQGKWI 270
L F ML+ KP+ YTF S + AC SN+V A++ +
Sbjct: 187 SCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSV 246
Query: 271 HSF---IGRGEIKMNE----RLLA-----SIIDMYAKCGEIESASRVFWEHNAKRK-VWP 317
SF +G + M E +L SIID K GE E A VF H A K +
Sbjct: 247 LSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVF--HLAPEKNIVT 304
Query: 318 WNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMV 377
W MI G+ +G +A++ F +M V + + A+L+ACS ++ GK+ ++
Sbjct: 305 WTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLI 364
Query: 378 ----SDYGIIPEIEHYGCMVDLLSRAGLLKEAE---------DMISSMPMAPDVAIWGAV 424
Y + +V+L ++ G +KEA+ D++S M + G
Sbjct: 365 HCGFQGYAYVGN-----ALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLA 419
Query: 425 LNACRIYKDM 434
A ++Y +M
Sbjct: 420 DQALKLYDNM 429
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 249 bits (635), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 150/481 (31%), Positives = 246/481 (51%), Gaps = 36/481 (7%)
Query: 67 AHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGAC 126
A LFD++ + ++ + MI + D +F + ++ + N + F AC
Sbjct: 227 ARSLFDRMTERNVITWTAMIDGY-FKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKAC 285
Query: 127 GNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVF------------ 174
+ + +EG Q+ ++ L+ ++F+ N+L+ MY K G + + VF
Sbjct: 286 RDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWN 345
Query: 175 -------------------EWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVS 215
E KD+ SW MI + G G +S+ ELF M E+D ++
Sbjct: 346 SLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNIT 405
Query: 216 WSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIG 275
W+ +I+ +V G + EAL +FH+MLQ PN YTF S L+A ++L L +G IH +
Sbjct: 406 WTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVV 465
Query: 276 RGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAI 335
+ I + + S++ MY KCG A ++F ++ + +N MI G++ +G +A+
Sbjct: 466 KMNIVNDLSVQNSLVSMYCKCGNTNDAYKIF-SCISEPNIVSYNTMISGYSYNGFGKKAL 524
Query: 336 KVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDL 395
K+F ++ PN VTF+ALL+AC H V+ G YF+ M S Y I P +HY CMVDL
Sbjct: 525 KLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDL 584
Query: 396 LSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCH 455
L R+GLL +A ++IS+MP P +WG++L+A + + ++ + + E++P+ +
Sbjct: 585 LGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPY 644
Query: 456 VLLGNIYSSSGRWNDA-RMLREKSEISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSRE 514
V+L +YS G+ D R++ K S KK PG S I L G + FL GD S E
Sbjct: 645 VVLSQLYSIIGKNRDCDRIMNIKK--SKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEE 702
Query: 515 L 515
+
Sbjct: 703 I 703
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 188/419 (44%), Gaps = 28/419 (6%)
Query: 61 DASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFV 120
+ +S A ++FD++P YN MI A + + +F + + +S Y+ +
Sbjct: 94 NGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVS---YATM 150
Query: 121 FT-FGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVD 179
T F G E E + + DS N L+ Y + G +VF+
Sbjct: 151 ITGFVRAGR---FDEAEFLYAETPVKFRDS--VASNVLLSGYLRAGKWNEAVRVFQGMAV 205
Query: 180 KDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRM 239
K++ S ++M+ Y G + A+ LFD M E++V++W+ +I GY + G F + F RM
Sbjct: 206 KEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRM 265
Query: 240 LQVGP-KPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGE 298
Q G K N T AC + V +G IH + R ++ + L S++ MY+K G
Sbjct: 266 RQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGY 325
Query: 299 IESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLN 358
+ A VF K V WN++I G + SEA ++F+KM +++ V++ ++
Sbjct: 326 MGEAKAVFGVMKNKDSV-SWNSLITGLVQRKQISEAYELFEKMPGKDM----VSWTDMIK 380
Query: 359 ACSHGYMVEEGKLYFRLMVSDYGIIPEIEH--YGCMVDLLSRAGLLKEAEDMISSM---P 413
S GK V +G++PE ++ + M+ G +EA M
Sbjct: 381 GFS-------GKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKE 433
Query: 414 MAPDVAIWGAVLNACRIYKDMERGYRI-GRIIKEMDPNHVGCHVLLGNIYSSSGRWNDA 471
+ P+ + +VL+A D+ G +I GR++K N + L ++Y G NDA
Sbjct: 434 VCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDA 492
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 146/354 (41%), Gaps = 50/354 (14%)
Query: 126 CGNGLSVQEGEQV----RSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKD 181
C + L+V E + R+ + +F N+ I + + G ++ +F ++
Sbjct: 21 CNSTLAVSNHEPITQKTRNFLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRS 80
Query: 182 LYSWNTMIAAYVGSGNMSQAKELFDEM--------------------------------Q 209
+ SW MI+AY +G MS+A ++FDEM
Sbjct: 81 IVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIP 140
Query: 210 EQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVA-LDQGK 268
E++ VS++T+I G+V+ G F EA +F + V F ++A+ L L GK
Sbjct: 141 EKNAVSYATMITGFVRAGRFDEA-EFLYAETPV-------KFRDSVASNVLLSGYLRAGK 192
Query: 269 WIHSF-IGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAM 327
W + + +G +S++ Y K G I A R ++ +R V W AMI G+
Sbjct: 193 WNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDA-RSLFDRMTERNVITWTAMIDGYFK 251
Query: 328 HGKPSEAIKVFQKMKVE-NVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEI 386
G + +F +M+ E +V N T + AC EG L VS + ++
Sbjct: 252 AGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGL-VSRMPLEFDL 310
Query: 387 EHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRI 440
++ + S+ G + EA+ + M V+ W +++ K + Y +
Sbjct: 311 FLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVS-WNSLITGLVQRKQISEAYEL 363
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 248 bits (634), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 137/470 (29%), Positives = 252/470 (53%), Gaps = 15/470 (3%)
Query: 65 SYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFG 124
S A+ F + D+ +N ++ A + SP + + ++ + + +
Sbjct: 383 SAAYWAFSLMSTKDIISWNAILDAFADSPKQFQ--FLNLLHHLLNEAITLDSVTILSLLK 440
Query: 125 ACGNGLSVQEGEQVRSHAVKVGL---DSNVFVVNALIGMYGKWGLVEYGRKVF-EWAVDK 180
C N + + ++V ++VK GL + + NAL+ Y K G VEY K+F + +
Sbjct: 441 FCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERR 500
Query: 181 DLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRML 240
L S+N++++ YV SG+ A+ LF EM D+ +WS ++ Y + C EA+ F +
Sbjct: 501 TLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQ 560
Query: 241 QVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIE 300
G +PN T ++ L C+ L +L + H +I RG + + RL +++D+YAKCG ++
Sbjct: 561 ARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLG-DIRLKGTLLDVYAKCGSLK 619
Query: 301 SASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNAC 360
A VF + +A+R + + AM+ G+A+HG+ EA+ ++ M N+ P+ V +L AC
Sbjct: 620 HAYSVF-QSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTAC 678
Query: 361 SHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAI 420
H ++++G + + + +G+ P +E Y C VDL++R G L +A ++ MP+ P+ I
Sbjct: 679 CHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANI 738
Query: 421 WGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWN---DARMLREK 477
WG +L AC Y M+ G+ + + + + + G HVL+ N+Y++ +W + R L +K
Sbjct: 739 WGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKK 798
Query: 478 SEISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLK 527
E+ KK GCS +E++G F+ GD SHP+ ++ ++ + ++K
Sbjct: 799 KEM----KKPAGCSWLEVDGQRNVFVSGDCSHPRRDSIFDLVNALYLQMK 844
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 98/430 (22%), Positives = 182/430 (42%), Gaps = 46/430 (10%)
Query: 8 LTKPFHSDHCCRLASLVDTCKSIQQI---KQTHAQLVTTALISHHVSANKFLKLVADAS- 63
L F +DH L +V C S+ + + H + I+ + L + A
Sbjct: 13 LLSGFGTDHRVFL-DVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRR 71
Query: 64 LSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTF 123
+ K+F Q+ D ++N ++ LS S +++ F+ + P+ +F
Sbjct: 72 MDDCQKMFRQMDSLDPVVWNIVLTG--LSVSCGRETMRFFKAMHFADEPKPSSVTFAIVL 129
Query: 124 GACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLV-EYGRKVFEWAVDKDL 182
C G+ + S+ +K GL+ + V NAL+ MY K+G + F+ DKD+
Sbjct: 130 PLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDV 189
Query: 183 YSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQV 242
SWN IIAG+ + +A F ML+
Sbjct: 190 VSWN-------------------------------AIIAGFSENNMMADAFRSFCLMLKE 218
Query: 243 GPKPNEYTFVSALAACSNL---VALDQGKWIHSF-IGRGEIKMNERLLASIIDMYAKCGE 298
+PN T + L C+++ +A G+ IHS+ + R ++ + + S++ Y + G
Sbjct: 219 PTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGR 278
Query: 299 IESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVE-NVSPNKVTFVALL 357
IE A+ +F +K V WN +I G+A + + +A ++F + + +VSP+ VT +++L
Sbjct: 279 IEEAASLFTRMGSKDLV-SWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISIL 337
Query: 358 NACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPD 417
C+ + GK ++ ++ + ++ +R G A S M D
Sbjct: 338 PVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMS-TKD 396
Query: 418 VAIWGAVLNA 427
+ W A+L+A
Sbjct: 397 IISWNAILDA 406
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 154/360 (42%), Gaps = 57/360 (15%)
Query: 34 KQTHAQLVTTALISHHVSANKFLKLVADASLSY--AHKLFDQIPQPDLFIYNTMIKAHSL 91
K H+ ++ L + N + + A + A+ FD I D+ +N +I S
Sbjct: 142 KSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFS- 200
Query: 92 SPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGN---GLSVQEGEQVRSHAVKVG-L 147
+ D+ F L+ ++ PN + C + ++ + G Q+ S+ V+ L
Sbjct: 201 ENNMMADAFRSFCLMLKEP-TEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWL 259
Query: 148 DSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDE 207
++VFV N+L+ Y+ G + +A LF
Sbjct: 260 QTHVFVCNSLVSF-------------------------------YLRVGRIEEAASLFTR 288
Query: 208 MQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGP-KPNEYTFVSALAACSNLVALDQ 266
M +D+VSW+ +IAGY + +A FH ++ G P+ T +S L C+ L L
Sbjct: 289 MGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLAS 348
Query: 267 GKWIHSFIGRGEIKMNERLLA-SIIDMYAKCGEIESASRVFWEHN--AKRKVWPWNAMIG 323
GK IHS+I R + + + ++I YA+ G+ +A +W + + + + WNA++
Sbjct: 349 GKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAA---YWAFSLMSTKDIISWNAILD 405
Query: 324 GFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNAC-----------SHGYMVEEGKLY 372
FA K + + + + E ++ + VT ++LL C HGY V+ G L+
Sbjct: 406 AFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLH 465
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 173/549 (31%), Positives = 275/549 (50%), Gaps = 79/549 (14%)
Query: 20 LASLVDTCKSIQQIKQTHAQLVTTALISHHVSANK---FLKLVAD--------------- 61
L L+ C S++ KQ QL+T L+ + NK FL AD
Sbjct: 9 LLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSIRSV 68
Query: 62 -ASLSY-----AHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPN 115
+S SY ++ + D+ P+ +F Y T + ++ SP VF+ + SG+
Sbjct: 69 LSSFSYNTLLSSYAVCDK-PRVTIFAYKTFV-SNGFSPDMFTFP-PVFKACGKFSGIREG 125
Query: 116 RY------------------SFVFTFGACGNGLSVQE--GEQ---------------VRS 140
+ S V +G CG + + GE R+
Sbjct: 126 KQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRT 185
Query: 141 HAVKVGLDS--------NVFVVNALIGMYGKWGLVEYGRKVFEWAVDK----DLYSWNTM 188
K LD+ N+ ++ G+ G + G+ + + + L + N +
Sbjct: 186 GLYKEALDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNAL 245
Query: 189 IAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRM-LQVGPKPN 247
I YV +S A +F E++++D VSW+++I+G V EA+D F M G KP+
Sbjct: 246 IDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPD 305
Query: 248 EYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFW 307
+ S L+AC++L A+D G+W+H +I IK + + +I+DMYAKCG IE+A +F
Sbjct: 306 GHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFN 365
Query: 308 EHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVE 367
+K V+ WNA++GG A+HG E+++ F++M PN VTF+A LNAC H +V+
Sbjct: 366 GIRSK-NVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVD 424
Query: 368 EGKLYFRLMVS-DYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLN 426
EG+ YF M S +Y + P++EHYGCM+DLL RAGLL EA +++ +MP+ PDV I GA+L+
Sbjct: 425 EGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILS 484
Query: 427 ACRIYKD-MERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATK 485
AC+ ME I +++ G +VLL NI++++ RW+D +R ++
Sbjct: 485 ACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVK-GIS 543
Query: 486 KIPGCSSIE 494
K+PG S IE
Sbjct: 544 KVPGSSYIE 552
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 245 bits (626), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 147/425 (34%), Positives = 231/425 (54%), Gaps = 39/425 (9%)
Query: 64 LSYAHKLFDQIPQP-DLFIYNTMIKAHSLSPSSCN-DSLMVFRLLTRDSGLSPNRYSFVF 121
LS A KLF +I + + +NTM+K + C+ + +FR + ++ G+ + S
Sbjct: 382 LSVAEKLFCRISEEGNKEAWNTMLKGYG--KMKCHVKCIELFRKI-QNLGIEIDSASATS 438
Query: 122 TFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKD 181
+C + +V G+ + + VK LD + VVN+LI +YGK G
Sbjct: 439 VISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMG---------------- 482
Query: 182 LYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQ 241
+++ A +F E + +V++W+ +IA YV +A+ F RM+
Sbjct: 483 ---------------DLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVS 526
Query: 242 VGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIES 301
KP+ T V+ L AC N +L++G+ IH +I E +MN L A++IDMYAKCG +E
Sbjct: 527 ENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEK 586
Query: 302 ASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACS 361
+ +F N K V WN MI G+ MHG AI +F +M+ +V P TF+ALL+AC+
Sbjct: 587 SRELFDAGNQKDAVC-WNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACT 645
Query: 362 HGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIW 421
H +VE+GK F L + Y + P ++HY C+VDLLSR+G L+EAE + SMP +PD IW
Sbjct: 646 HAGLVEQGKKLF-LKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIW 704
Query: 422 GAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEIS 481
G +L++C + + E G R+ DP + G +++L N+YS++G+W +A RE S
Sbjct: 705 GTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRES 764
Query: 482 TATKK 486
K+
Sbjct: 765 GVGKR 769
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 167/387 (43%), Gaps = 44/387 (11%)
Query: 23 LVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIPQPDLFI 81
L D S++ +++ +A ++T L + A+K + A + + ++F + + D+F+
Sbjct: 33 LCDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFL 92
Query: 82 YNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSH 141
+N++IKAH + F +L SG SP+ ++ AC L G V
Sbjct: 93 WNSIIKAHFSNGDYARSLCFFFSMLL--SGQSPDHFTAPMVVSACAELLWFHVGTFVHGL 150
Query: 142 AVK-VGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQ 200
+K G D N V + + Y K G ++
Sbjct: 151 VLKHGGFDRNTAVGASFVYFYSKCGFLQ-------------------------------D 179
Query: 201 AKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGP---KPNEYTFVSALAA 257
A +FDEM ++DVV+W+ II+G+VQ G L + +M G KPN T A
Sbjct: 180 ACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQA 239
Query: 258 CSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWP 317
CSNL AL +G+ +H F + + ++ + +S+ Y+K G A F E ++
Sbjct: 240 CSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFREL-GDEDMFS 298
Query: 318 WNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMV 377
W ++I A G E+ +F +M+ + + P+ V L+N +V +GK + ++
Sbjct: 299 WTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVI 358
Query: 378 S-----DYGIIPEIEHYGCMVDLLSRA 399
D + + C +LLS A
Sbjct: 359 RHCFSLDSTVCNSLLSMYCKFELLSVA 385
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 98/439 (22%), Positives = 177/439 (40%), Gaps = 65/439 (14%)
Query: 70 LFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLS-PNRYSFVFTFGACGN 128
+FD++P D+ + +I H + S + ++ + S + PN + F AC N
Sbjct: 183 VFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSN 242
Query: 129 GLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTM 188
+++EG + AVK GL S+ FV +++ Y K
Sbjct: 243 LGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSK------------------------- 277
Query: 189 IAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNE 248
SGN S+A F E+ ++D+ SW++IIA + G E+ D F M G P+
Sbjct: 278 ------SGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDG 331
Query: 249 YTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWE 308
+ ++ + QGK H F+ R ++ + S++ MY K + A ++F
Sbjct: 332 VVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCR 391
Query: 309 HNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEE 368
+ + WN M+ G+ + I++F+K++ + + + +++++CSH V
Sbjct: 392 ISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLL 451
Query: 369 GK------LYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAE---------------- 406
GK + L ++ + I+ YG M DL + EA+
Sbjct: 452 GKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADTNVITWNAMIASYVHC 511
Query: 407 ----------DMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPN-HVGCH 455
D + S P +L AC +ERG I R I E + ++
Sbjct: 512 EQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLS 571
Query: 456 VLLGNIYSSSGRWNDARML 474
L ++Y+ G +R L
Sbjct: 572 AALIDMYAKCGHLEKSREL 590
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 155/373 (41%), Gaps = 44/373 (11%)
Query: 22 SLVDTCKSIQQI---KQTHAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIPQP 77
S++ +C I + K H +V T+L N + L L+ A ++F +
Sbjct: 438 SVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADT 496
Query: 78 DLFIYNTMIKAHSLSPSSCNDSLMVFRLLTR--DSGLSPNRYSFVFTFGACGNGLSVQEG 135
++ +N MI ++ C S L R P+ + V AC N S++ G
Sbjct: 497 NVITWNAMIASYV----HCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERG 552
Query: 136 EQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGS 195
+ + + + + N+ + ALI MY K G +E R++F+ KD WN MI+ Y
Sbjct: 553 QMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMH 612
Query: 196 GNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSAL 255
G++ A LFD+M+E DV KP TF++ L
Sbjct: 613 GDVESAIALFDQMEESDV-------------------------------KPTGPTFLALL 641
Query: 256 AACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKV 315
+AC++ ++QGK + + + ++K N + + ++D+ ++ G +E A
Sbjct: 642 SACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDG 701
Query: 316 WPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRL 375
W ++ HG+ I++ ++ V + N ++ L N S EE + R
Sbjct: 702 VIWGTLLSSCMTHGEFEMGIRMAER-AVASDPQNDGYYIMLANMYSAAGKWEEAE-RARE 759
Query: 376 MVSDYGIIPEIEH 388
M+ + G+ H
Sbjct: 760 MMRESGVGKRAGH 772
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 118/275 (42%), Gaps = 25/275 (9%)
Query: 177 AVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFF 236
+ ++++ + +I++Y G + + +F + +D+ W++II + G + +L FF
Sbjct: 54 GLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFF 113
Query: 237 HRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGR-GEIKMNERLLASIIDMYAK 295
ML G P+ +T ++AC+ L+ G ++H + + G N + AS + Y+K
Sbjct: 114 FSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSK 173
Query: 296 CGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVS---PNKVT 352
CG ++ A VF E R V W A+I G +G+ + KM PN T
Sbjct: 174 CGFLQDACLVFDEM-PDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRT 232
Query: 353 FVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEA------- 405
ACS+ ++EG+ V + G+ M S++G EA
Sbjct: 233 LECGFQACSNLGALKEGRCLHGFAVKN-GLASSKFVQSSMFSFYSKSGNPSEAYLSFREL 291
Query: 406 --EDMISSMPMAPDVAIWGAVLNACRIYKDMERGY 438
EDM S W +++ + DME +
Sbjct: 292 GDEDMFS----------WTSIIASLARSGDMEESF 316
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 244 bits (624), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 146/468 (31%), Positives = 243/468 (51%), Gaps = 54/468 (11%)
Query: 20 LASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVADASLSY----------AHK 69
L+S V C + +++ + +I+H N F+ ++L+Y A +
Sbjct: 166 LSSAVKACSELGEVRL--GRCFHGVVITHGFEWNHFI----SSTLAYLYGVNREPVDARR 219
Query: 70 LFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNG 129
+FD++P+PD+ + ++ A S ++L +F + R GL P+ +F ACGN
Sbjct: 220 VFDEMPEPDVICWTAVLSAFS-KNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNL 278
Query: 130 LSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMI 189
+++G+++ + G+ SNV V ++L+ MYGK G V
Sbjct: 279 RRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVR--------------------- 317
Query: 190 AAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEY 249
+A+++F+ M +++ VSWS ++ GY Q G +A++ F M + + Y
Sbjct: 318 ----------EARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREM----EEKDLY 363
Query: 250 TFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEH 309
F + L AC+ L A+ GK IH R N + +++ID+Y K G I+SASRV+ +
Sbjct: 364 CFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKM 423
Query: 310 NAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEG 369
+ R + WNAM+ A +G+ EA+ F M + + P+ ++F+A+L AC H MV+EG
Sbjct: 424 SI-RNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEG 482
Query: 370 KLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACR 429
+ YF LM YGI P EHY CM+DLL RAGL +EAE+++ D ++WG +L C
Sbjct: 483 RNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCA 542
Query: 430 IYKDMER-GYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLRE 476
D R RI + + E++P + +VLL N+Y + GR DA +R+
Sbjct: 543 ANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRK 590
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 152/337 (45%), Gaps = 36/337 (10%)
Query: 113 SPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRK 172
+P Y+ + C S G Q +H VK GL+++ V N+L+ +Y K G
Sbjct: 60 TPKLYASLLQ--TCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLG------- 110
Query: 173 VFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEA 232
M + + +FD +D +SW+++++GYV ++A
Sbjct: 111 -----------------------PGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKA 147
Query: 233 LDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDM 292
L+ F M+ G NE+T SA+ ACS L + G+ H + + N + +++ +
Sbjct: 148 LEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYL 207
Query: 293 YAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKM-KVENVSPNKV 351
Y E A RVF E + V W A++ F+ + EA+ +F M + + + P+
Sbjct: 208 YGVNREPVDARRVFDEM-PEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGS 266
Query: 352 TFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISS 411
TF +L AC + +++GK ++++ GI + ++D+ + G ++EA + +
Sbjct: 267 TFGTVLTACGNLRRLKQGKEIHGKLITN-GIGSNVVVESSLLDMYGKCGSVREARQVFNG 325
Query: 412 MPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMD 448
M V+ W A+L + E+ I R ++E D
Sbjct: 326 MSKKNSVS-WSALLGGYCQNGEHEKAIEIFREMEEKD 361
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 110/259 (42%), Gaps = 35/259 (13%)
Query: 251 FVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHN 310
+ S L C+ + + G H+ + + ++ + + S++ +Y K G +R ++
Sbjct: 64 YASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGR 123
Query: 311 AKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACS--------- 361
+ W +M+ G+ + +A++VF +M + N+ T + + ACS
Sbjct: 124 FVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGR 183
Query: 362 --HGYMVEEGKLYFRLMVSD----YGI---------------IPEIEHYGCMVDLLSRAG 400
HG ++ G + + S YG+ P++ + ++ S+
Sbjct: 184 CFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKND 243
Query: 401 LLKEAEDMISSM----PMAPDVAIWGAVLNACRIYKDMERGYRI-GRIIKEMDPNHVGCH 455
L +EA + +M + PD + +G VL AC + +++G I G++I ++V
Sbjct: 244 LYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVE 303
Query: 456 VLLGNIYSSSGRWNDARML 474
L ++Y G +AR +
Sbjct: 304 SSLLDMYGKCGSVREARQV 322
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 152/514 (29%), Positives = 255/514 (49%), Gaps = 42/514 (8%)
Query: 20 LASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIP-QP 77
L +L+D +KQ HA+++ L N + AD S+S A ++FD +
Sbjct: 209 LLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSK 268
Query: 78 DLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQ 137
DL +N+MI S +S + + + + Y++ AC G+
Sbjct: 269 DLISWNSMIAG--FSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKS 326
Query: 138 VRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGN 197
+ +K GL+ NALI MY ++ +G
Sbjct: 327 LHGMVIKKGLEQVTSATNALISMYIQFP-----------------------------TGT 357
Query: 198 MSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAA 257
M A LF+ ++ +D++SW++II G+ Q G +A+ FF + K ++Y F + L +
Sbjct: 358 MEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRS 417
Query: 258 CSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWP 317
CS+L L G+ IH+ + NE +++S+I MY+KCG IESA + F + ++K
Sbjct: 418 CSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVA 477
Query: 318 WNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMV 377
WNAMI G+A HG ++ +F +M +NV + VTF A+L ACSH +++EG LM
Sbjct: 478 WNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLME 537
Query: 378 SDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERG 437
Y I P +EHY VDLL RAGL+ +A+++I SMP+ PD + L CR ++E
Sbjct: 538 PVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMA 597
Query: 438 YRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWND----ARMLREKSEISTATKKIPGCSSI 493
++ + E++P +V L ++YS +W + +M++E+ KK+PG S I
Sbjct: 598 TQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKER-----GVKKVPGWSWI 652
Query: 494 ELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLK 527
E+ F DRS+P +++Y + ++T +++
Sbjct: 653 EIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEMQ 686
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 171/397 (43%), Gaps = 55/397 (13%)
Query: 31 QQIKQTHAQLVTTALISHHVSANKFL-KLVADASLSYAHKLFDQIPQPDLFIYNTMIKAH 89
Q++ TH + IS +N+ L + L YA+ LFD++P+ D +NTMI +
Sbjct: 17 QKLSLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGY 76
Query: 90 SLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDS 149
+ S D+ +F + R SG + YSF + GEQV +K G +
Sbjct: 77 T-SCGKLEDAWCLFTCMKR-SGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYEC 134
Query: 150 NVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQ 209
NV+V ++L+ MY K VE A E F E+
Sbjct: 135 NVYVGSSLVDMYAKCERVE-------------------------------DAFEAFKEIS 163
Query: 210 EQDVVSWSTIIAGYVQVGCFMEALDFFHRM-LQVGPKPNEYTFVSALAACSNLVALDQGK 268
E + VSW+ +IAG+VQV A M ++ + TF L + + + K
Sbjct: 164 EPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLK 223
Query: 269 WIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMH 328
+H+ + + ++ + ++I YA CG + A RVF + + WN+MI GF+ H
Sbjct: 224 QVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKH 283
Query: 329 GKPSEAIKVFQKMKVENVSPNKVTFVALLNACS-----------HGYMVEEG----KLYF 373
A ++F +M+ V + T+ LL+ACS HG ++++G
Sbjct: 284 ELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSAT 343
Query: 374 RLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMIS 410
++S Y P G M D LS LK ++D+IS
Sbjct: 344 NALISMYIQFPT----GTMEDALSLFESLK-SKDLIS 375
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 121/261 (46%), Gaps = 3/261 (1%)
Query: 181 DLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRML 240
D+Y N ++ +Y+ G + A LFDEM ++D VSW+T+I+GY G +A F M
Sbjct: 34 DIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMK 93
Query: 241 QVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIE 300
+ G + Y+F L +++ D G+ +H + +G + N + +S++DMYAKC +E
Sbjct: 94 RSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVE 153
Query: 301 SASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVE-NVSPNKVTFVALLNA 359
A F E + V WNA+I GF A + M+++ V+ + TF LL
Sbjct: 154 DAFEAFKEISEPNSV-SWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTL 212
Query: 360 CSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVA 419
K V G+ EI M+ + G + +A+ + + + D+
Sbjct: 213 LDDPMFCNLLK-QVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLI 271
Query: 420 IWGAVLNACRIYKDMERGYRI 440
W +++ ++ E + +
Sbjct: 272 SWNSMIAGFSKHELKESAFEL 292
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 139/451 (30%), Positives = 249/451 (55%), Gaps = 11/451 (2%)
Query: 34 KQTHAQLVTTALISHHVSANKFLKL-VADASLSYAHKLFDQIPQPDLFIYNTMIKAHSLS 92
K+ HA ++ T + K L L + LSYA ++FD++P+P L YN MI + L
Sbjct: 54 KKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGY-LK 112
Query: 93 PSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGAC---GNGLSVQEG--EQVRSHAVKVGL 147
+ L++ + ++ SG + Y+ A G+ + + V + +K +
Sbjct: 113 HGLVKELLLLVQRMSY-SGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDV 171
Query: 148 DSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDE 207
+ + ++ AL+ Y K G +E R VFE D+++ +MI+ Y+ G + A+E+F+
Sbjct: 172 ELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNT 231
Query: 208 MQEQDVVSWSTIIAGYVQVG-CFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQ 266
+ +D+V ++ ++ G+ + G ++D + M + G PN TF S + ACS L + +
Sbjct: 232 TKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEV 291
Query: 267 GKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFA 326
G+ +H+ I + + + ++ +S++DMYAKCG I A RVF + ++ V+ W +MI G+
Sbjct: 292 GQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVF-DQMQEKNVFSWTSMIDGYG 350
Query: 327 MHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEI 386
+G P EA+++F +MK + PN VTF+ L+ACSH +V++G F M DY + P++
Sbjct: 351 KNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKM 410
Query: 387 EHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDME-RGYRIGRIIK 445
EHY C+VDL+ RAG L +A + +MP PD IW A+L++C ++ ++E + K
Sbjct: 411 EHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFK 470
Query: 446 EMDPNHVGCHVLLGNIYSSSGRWNDARMLRE 476
G ++ L N+Y+S+ +W++ +RE
Sbjct: 471 LNADKRPGAYLALSNVYASNDKWDNVSKIRE 501
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 158/492 (32%), Positives = 254/492 (51%), Gaps = 47/492 (9%)
Query: 67 AHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRD-SGLSPNRYSFVFTFGA 125
A++LF ++P+ ++ + MI + + ++LM+F + +D +SPN + + A
Sbjct: 250 AYRLFCEMPERNIVSWTAMISGFAWNELY-REALMLFLEMKKDVDAVSPNGETLISLAYA 308
Query: 126 CGNGLSVQ---EGEQVRSHAVKVG---LDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVD 179
CG GL V+ GEQ+ + + G +D + + +L+ MY GL+ + + + D
Sbjct: 309 CG-GLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFD 367
Query: 180 ------------------------------KDLYSWNTMIAAYVGSGNMSQAKELFDEMQ 209
D SW +MI Y+ +G++S+A LF ++
Sbjct: 368 LQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLH 427
Query: 210 EQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKW 269
++D V+W+ +I+G VQ F EA M++ G KP T+ L++ LDQGK
Sbjct: 428 DKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKH 487
Query: 270 IHSFIGRGEIKMNERLLA--SIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAM 327
IH I + + L+ S++ MYAKCG IE A +F + K V WN+MI G +
Sbjct: 488 IHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTV-SWNSMIMGLSH 546
Query: 328 HGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIE 387
HG +A+ +F++M PN VTF+ +L+ACSH ++ G F+ M Y I P I+
Sbjct: 547 HGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGID 606
Query: 388 HYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIY---KDMER-GYRIGRI 443
HY M+DLL RAG LKEAE+ IS++P PD ++GA+L C + KD E R
Sbjct: 607 HYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMR 666
Query: 444 IKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNGTFYQFL 503
+ E+DP + HV L N+Y+ GR + + +R++ I KK PGCS + +NG FL
Sbjct: 667 LLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIK-GVKKTPGCSWVVVNGRANVFL 725
Query: 504 VGDRSHPQSREL 515
GD+S ++ ++
Sbjct: 726 SGDKSASEAAQM 737
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 99/444 (22%), Positives = 199/444 (44%), Gaps = 50/444 (11%)
Query: 64 LSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTR-------------DS 110
L A LF+ +P+ ++ N M+ + + N++ +FR + + D
Sbjct: 93 LDEARVLFEVMPERNIVTCNAMLTGY-VKCRRMNEAWTLFREMPKNVVSWTVMLTALCDD 151
Query: 111 GLSPNRYSF--------VFTFGACGNGLSVQEGEQVRSHAVKVGLDS-NVFVVNALIGMY 161
G S + V ++ GL ++ G+ ++ V + S +V NA+I Y
Sbjct: 152 GRSEDAVELFDEMPERNVVSWNTLVTGL-IRNGDMEKAKQVFDAMPSRDVVSWNAMIKGY 210
Query: 162 GKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIA 221
+ +E + +F +K++ +W +M+ Y G++ +A LF EM E+++VSW+ +I+
Sbjct: 211 IENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMIS 270
Query: 222 GYVQVGCFMEALDFFHRMLQ--VGPKPNEYTFVSALAACSNL-VALDQ-GKWIHSFI--- 274
G+ + EAL F M + PN T +S AC L V + G+ +H+ +
Sbjct: 271 GFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISN 330
Query: 275 GRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEA 334
G + + RL S++ MYA G I SA + N + N +I + +G A
Sbjct: 331 GWETVDHDGRLAKSLVHMYASSGLIASAQSLL---NESFDLQSCNIIINRYLKNGDLERA 387
Query: 335 IKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVD 394
+F+++K + +KV++ ++++ V F+ + G+ + M+
Sbjct: 388 ETLFERVKSLH---DKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVT-----WTVMIS 439
Query: 395 LLSRAGLLKEAEDMISSM---PMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEM---- 447
L + L EA ++S M + P + + +L++ ++++G I +I +
Sbjct: 440 GLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACY 499
Query: 448 DPNHVGCHVLLGNIYSSSGRWNDA 471
DP+ + + L+ ++Y+ G DA
Sbjct: 500 DPDLILQNSLV-SMYAKCGAIEDA 522
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 147/329 (44%), Gaps = 50/329 (15%)
Query: 156 ALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKE------------ 203
+L+ Y K G ++ R +FE ++++ + N M+ YV M++A
Sbjct: 82 SLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPKNVVSW 141
Query: 204 ------------------LFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPK 245
LFDEM E++VVSW+T++ G ++ G +A F M P
Sbjct: 142 TVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAM----PS 197
Query: 246 PNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRV 305
+ ++ + + +++ K + + + N S++ Y + G++ A R+
Sbjct: 198 RDVVSWNAMIKGYIENDGMEEAKLLFGDMS----EKNVVTWTSMVYGYCRYGDVREAYRL 253
Query: 306 FWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMK--VENVSPNKVTFVALLNACSHG 363
F E +R + W AMI GFA + EA+ +F +MK V+ VSPN T ++L AC G
Sbjct: 254 FCEM-PERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACG-G 311
Query: 364 YMVEEGKLYFRLMVSDYGIIPE-IEHYG----CMVDLLSRAGLLKEAEDMISSMPMAPDV 418
VE +L +L E ++H G +V + + +GL+ A+ +++ + D+
Sbjct: 312 LGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNE---SFDL 368
Query: 419 AIWGAVLNACRIYKDMERGYRIGRIIKEM 447
++N D+ER + +K +
Sbjct: 369 QSCNIIINRYLKNGDLERAETLFERVKSL 397
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 132/336 (39%), Gaps = 52/336 (15%)
Query: 31 QQIKQTHAQLVTTALISHHVSANKFLKLVADASLSYAHKLFDQIPQPDLFIYNTMIKAHS 90
+++K H ++ T++I ++ A +S A LF ++ D + MI
Sbjct: 392 ERVKSLHDKVSWTSMIDGYLEA---------GDVSRAFGLFQKLHDKDGVTWTVMISGLV 442
Query: 91 LSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVG--LD 148
+ + ++ ++ GL P ++ + G ++ +G+ + K D
Sbjct: 443 QNELFAEAASLLSDMVR--CGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYD 500
Query: 149 SNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEM 208
++ + N+L+ MY K G +E ++F V KD SWN+M
Sbjct: 501 PDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSM-------------------- 540
Query: 209 QEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGK 268
I G G +AL+ F ML G KPN TF+ L+ACS+ + +G
Sbjct: 541 -----------IMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRG- 588
Query: 269 WIHSFIGRGE---IKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIG-- 323
+ F E I+ S+ID+ + G+++ A + A++G
Sbjct: 589 -LELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLC 647
Query: 324 GFAMHGKPSEAIKVFQKMKVENVSP-NKVTFVALLN 358
G K +E I M++ + P N VAL N
Sbjct: 648 GLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCN 683
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 15/189 (7%)
Query: 185 WNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGP 244
W ++++ Y +G + +A+ LF+ M E+++V+ + ++ GYV+ EA F M P
Sbjct: 80 WTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREM----P 135
Query: 245 KPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASR 304
K V A C + + D + R + N +++ + G++E A +
Sbjct: 136 KNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWN-----TLVTGLIRNGDMEKAKQ 190
Query: 305 VFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNA-CSHG 363
VF + R V WNAMI G+ + EA +F M +NV VT+ +++ C +G
Sbjct: 191 VF-DAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNV----VTWTSMVYGYCRYG 245
Query: 364 YMVEEGKLY 372
+ E +L+
Sbjct: 246 DVREAYRLF 254
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 149/488 (30%), Positives = 248/488 (50%), Gaps = 64/488 (13%)
Query: 6 STLTKPFHSDHCCRLASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVADASLS 65
S++T D LA+L+ C S+ ++++ H +
Sbjct: 36 SSVTPLSPQDRNKLLATLLSNCTSLARVRRIHGDI------------------------- 70
Query: 66 YAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGA 125
+ ++ DQ P F++N +++++ + S D++ V+ + R + L P+RYS A
Sbjct: 71 FRSRILDQYPIA--FLWNNIMRSY-IRHESPLDAIQVYLGMVRSTVL-PDRYSLPIVIKA 126
Query: 126 CGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSW 185
G+++ S AV++G + F + I +Y K
Sbjct: 127 AVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCK---------------------- 164
Query: 186 NTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPK 245
+G A+++FDE E+ + SW+ II G G EA++ F M + G +
Sbjct: 165 ---------AGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLE 215
Query: 246 PNEYTFVSALAACSNLVALDQGKWIHSFI--GRGEIKMNERLLASIIDMYAKCGEIESAS 303
P+++T VS A+C L L +H + + E K + +L S+IDMY KCG ++ AS
Sbjct: 216 PDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLAS 275
Query: 304 RVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHG 363
+F E +R V W++MI G+A +G EA++ F++M+ V PNK+TFV +L+AC HG
Sbjct: 276 HIF-EEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHG 334
Query: 364 YMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGA 423
+VEEGK YF +M S++ + P + HYGC+VDLLSR G LKEA+ ++ MPM P+V +WG
Sbjct: 335 GLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGC 394
Query: 424 VLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTA 483
++ C + D+E + + E++P + G +V+L N+Y+ G W D +R K +
Sbjct: 395 LMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVR-KLMKTKK 453
Query: 484 TKKIPGCS 491
KIP S
Sbjct: 454 VAKIPAYS 461
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 160/577 (27%), Positives = 278/577 (48%), Gaps = 80/577 (13%)
Query: 20 LASLVDTCKSI---QQIKQTHAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIP 75
+ S+V+ C + + + H Q+ N L + + L + ++F++I
Sbjct: 205 MISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIA 264
Query: 76 QPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEG 135
+ + + MI +++ S +L F + + SG+ PN + +CG ++EG
Sbjct: 265 KKNAVSWTAMISSYNRGEFS-EKALRSFSEMIK-SGIEPNLVTLYSVLSSCGLIGLIREG 322
Query: 136 EQVRSHAVKVGL--------------------------------DSNVFVVNALIGMYGK 163
+ V AV+ L D N+ N+LI +Y
Sbjct: 323 KSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAH 382
Query: 164 WGLVEYGRKVFEWAVDK--------------------------------------DLYSW 185
G+V +F V + D +
Sbjct: 383 RGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQ 442
Query: 186 NTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPK 245
N++I Y SG++ A +F++++ + VV+W++++ G+ Q G +EA+ F M +
Sbjct: 443 NSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLE 502
Query: 246 PNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRV 305
NE TF++ + ACS++ +L++GKW+H + +K + ++IDMYAKCG++ +A V
Sbjct: 503 MNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETV 561
Query: 306 FWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYM 365
F +++ V ++MI + MHG+ AI F +M PN+V F+ +L+AC H
Sbjct: 562 FRAMSSRSIVSW-SSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGS 620
Query: 366 VEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVL 425
VEEGK YF LM S +G+ P EH+ C +DLLSR+G LKEA I MP D ++WG+++
Sbjct: 621 VEEGKYYFNLMKS-FGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLV 679
Query: 426 NACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATK 485
N CRI++ M+ I + ++ + G + LL NIY+ G W + R LR + S+ K
Sbjct: 680 NGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMK-SSNLK 738
Query: 486 KIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEM 522
K+PG S+IE++ ++F G+ + Q+ E+Y FL +
Sbjct: 739 KVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNL 775
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 188/394 (47%), Gaps = 45/394 (11%)
Query: 23 LVDTCKSIQQIKQTHAQLVTTALISHH-VSANKFLKLVA-DASLSYAHKLFDQIPQPDLF 80
L +C S++ + Q HA L+ T + + K ++ A S + +F+ P PD F
Sbjct: 7 LFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSF 66
Query: 81 IYNTMIKAH---SLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGAC-GNGLSVQEGE 136
+Y +IK + L ++ + + RL++ + +S ++ F AC G+ + G
Sbjct: 67 MYGVLIKCNVWCHLLDAAID---LYHRLVSETTQIS--KFVFPSVLRACAGSREHLSVGG 121
Query: 137 QVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSG 196
+V +K G+D + + +L+ MYG+ +G
Sbjct: 122 KVHGRIIKGGVDDDAVIETSLLCMYGQ-------------------------------TG 150
Query: 197 NMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALA 256
N+S A+++FD M +D+V+WST+++ ++ G ++AL F M+ G +P+ T +S +
Sbjct: 151 NLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVE 210
Query: 257 ACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVW 316
C+ L L + +H I R ++E L S++ MY+KCG++ S+ R+F E AK+
Sbjct: 211 GCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIF-EKIAKKNAV 269
Query: 317 PWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLM 376
W AMI + +A++ F +M + PN VT ++L++C ++ EGK
Sbjct: 270 SWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFA 329
Query: 377 VSDYGIIPEIEHYG-CMVDLLSRAGLLKEAEDMI 409
V + P E +V+L + G L + E ++
Sbjct: 330 VRRE-LDPNYESLSLALVELYAECGKLSDCETVL 362
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/327 (19%), Positives = 143/327 (43%), Gaps = 37/327 (11%)
Query: 180 KDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRM 239
+D +I +Y G+ ++ +F+ D + +I V A+D +HR+
Sbjct: 32 RDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRL 91
Query: 240 LQVGPKPNEYTFVSALAACS-NLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGE 298
+ + +++ F S L AC+ + L G +H I +G + + + S++ MY + G
Sbjct: 92 VSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGN 151
Query: 299 IESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLN 358
+ A +VF + R + W+ ++ +G+ +A+++F+ M + V P+ VT ++++
Sbjct: 152 LSDAEKVF-DGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVE 210
Query: 359 ACS-----------HGYMVEEG------------KLYFRL--MVSDYGIIPEIEH----- 388
C+ HG + + +Y + ++S I +I
Sbjct: 211 GCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVS 270
Query: 389 YGCMVDLLSRAGLLKEAEDMISSM---PMAPDVAIWGAVLNACRIYKDMERGYRIG--RI 443
+ M+ +R ++A S M + P++ +VL++C + + G + +
Sbjct: 271 WTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAV 330
Query: 444 IKEMDPNHVGCHVLLGNIYSSSGRWND 470
+E+DPN+ + L +Y+ G+ +D
Sbjct: 331 RRELDPNYESLSLALVELYAECGKLSD 357
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 242 bits (618), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 143/437 (32%), Positives = 221/437 (50%), Gaps = 36/437 (8%)
Query: 98 DSLMVFRLLTRDSGL-SPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNA 156
D L +F L+ R GL PN +++ AC + EG+Q+ + K G++S + + +A
Sbjct: 239 DGLRLFSLMRR--GLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESA 296
Query: 157 LIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSW 216
L+ MY K G +E A +F+ E D VS
Sbjct: 297 LMDMYSKCGSIE-------------------------------DAWTIFESTTEVDEVSM 325
Query: 217 STIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGR 276
+ I+ G Q G EA+ FF RMLQ G + + + L +L GK +HS + +
Sbjct: 326 TVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIK 385
Query: 277 GEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIK 336
+ N + +I+MY+KCG++ + VF KR WN+MI FA HG A+K
Sbjct: 386 RKFSGNTFVNNGLINMYSKCGDLTDSQTVF-RRMPKRNYVSWNSMIAAFARHGHGLAALK 444
Query: 337 VFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLL 396
++++M V P VTF++LL+ACSH ++++G+ M +GI P EHY C++D+L
Sbjct: 445 LYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDML 504
Query: 397 SRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHV 456
RAGLLKEA+ I S+P+ PD IW A+L AC + D E G + + P+ H+
Sbjct: 505 GRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHI 564
Query: 457 LLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELY 516
L+ NIYSS G+W + ++ + TK+ G SSIE+ + F+V D+ HPQ+ +Y
Sbjct: 565 LIANIYSSRGKWKERAKTIKRMKAMGVTKE-TGISSIEIEHKTHSFVVEDKLHPQAEAIY 623
Query: 517 SFLDEMTTKLKIAGYVP 533
L + + GY P
Sbjct: 624 DVLSGLFPVMVDEGYRP 640
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 125/265 (47%), Gaps = 11/265 (4%)
Query: 179 DKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHR 238
DK++ N +I +Y G + +FD M ++V++ + +I+G ++ + L F
Sbjct: 187 DKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSL 246
Query: 239 MLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGE 298
M + PN T++SALAACS + +G+ IH+ + + I+ + ++++DMY+KCG
Sbjct: 247 MRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGS 306
Query: 299 IESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLN 358
IE A +F E + ++ G A +G EAI+ F +M V + A+L
Sbjct: 307 IEDAWTIF-ESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLG 365
Query: 359 ACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMP----- 413
+ GK L++ + G ++++ S+ G L +++ + MP
Sbjct: 366 VSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNG-LINMYSKCGDLTDSQTVFRRMPKRNYV 424
Query: 414 ----MAPDVAIWGAVLNACRIYKDM 434
M A G L A ++Y++M
Sbjct: 425 SWNSMIAAFARHGHGLAALKLYEEM 449
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 118/256 (46%), Gaps = 16/256 (6%)
Query: 174 FEWAVDKDLYS-----WNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGC 228
F VD D++ WN++++ Y G + A +LFDEM +DV+S + + G+++
Sbjct: 77 FFEPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRE 136
Query: 229 FMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSF-IGRG---EIKMNER 284
RML G + T L+ C K IH+ I G EI + +
Sbjct: 137 TESGFVLLKRMLGSG-GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNK 195
Query: 285 LLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVE 344
L+ S Y KCG S VF + + R V A+I G + + +++F M+
Sbjct: 196 LITS----YFKCGCSVSGRGVF-DGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRG 250
Query: 345 NVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKE 404
V PN VT+++ L ACS + EG+ L+ YGI E+ ++D+ S+ G +++
Sbjct: 251 LVHPNSVTYLSALAACSGSQRIVEGQQIHALLWK-YGIESELCIESALMDMYSKCGSIED 309
Query: 405 AEDMISSMPMAPDVAI 420
A + S +V++
Sbjct: 310 AWTIFESTTEVDEVSM 325
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 127/328 (38%), Gaps = 51/328 (15%)
Query: 13 HSDHCCRLASLVDTCKSIQQI---KQTHAQLVTTALISHHVSANKFLKLVAD-ASLSYAH 68
H + L++L C Q+I +Q HA L + S + + + + S+ A
Sbjct: 253 HPNSVTYLSALA-ACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAW 311
Query: 69 KLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGN 128
+F+ + D ++ + + S R+L + N S V N
Sbjct: 312 TIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDN 371
Query: 129 GLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTM 188
L + G+Q+ S +K N FV N LI MY K G + + VF ++ SWN+M
Sbjct: 372 SLGL--GKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSM 429
Query: 189 IAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNE 248
IAA+ G+ A +L++EM +V KP +
Sbjct: 430 IAAFARHGHGLAALKLYEEMTTLEV-------------------------------KPTD 458
Query: 249 YTFVSALAACSNLVALDQG-------KWIHSFIGRGEIKMNERLLASIIDMYAKCGEIES 301
TF+S L ACS++ +D+G K +H R E IIDM + G ++
Sbjct: 459 VTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTE------HYTCIIDMLGRAGLLKE 512
Query: 302 ASRVFWEHNAKRKVWPWNAMIGGFAMHG 329
A K W A++G + HG
Sbjct: 513 AKSFIDSLPLKPDCKIWQALLGACSFHG 540
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 242 bits (618), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 144/478 (30%), Positives = 257/478 (53%), Gaps = 9/478 (1%)
Query: 19 RLASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVADASLS-YAHKLFDQIPQP 77
+L L+ + ++ + HA L+ L ++ F+ + S S YA+++F I P
Sbjct: 6 KLLRLLHGHNTRTRLPEIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNP 65
Query: 78 DLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQ 137
++ ++N MIK +SL +SL F + + G+ + Y++ +C + ++ G+
Sbjct: 66 NVLVFNAMIKCYSLVGPPL-ESLSFFSSM-KSRGIWADEYTYAPLLKSCSSLSDLRFGKC 123
Query: 138 VRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGN 197
V ++ G + ++ +Y G + +KVF+ ++++ WN MI + SG+
Sbjct: 124 VHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGD 183
Query: 198 MSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAA 257
+ + LF +M E+ +VSW+++I+ + G EAL+ F M+ G P+E T V+ L
Sbjct: 184 VERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPI 243
Query: 258 CSNLVALDQGKWIHSFI-GRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVW 316
++L LD GKWIHS G K + +++D Y K G++E+A+ +F + +R V
Sbjct: 244 SASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQ-RRNVV 302
Query: 317 PWNAMIGGFAMHGKPSEAIKVFQKMKVEN-VSPNKVTFVALLNACSHGYMVEEGKLYFRL 375
WN +I G A++GK I +F M E V+PN+ TF+ +L CS+ VE G+ F L
Sbjct: 303 SWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGL 362
Query: 376 MVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDME 435
M+ + + EHYG MVDL+SR+G + EA + +MP+ + A+WG++L+ACR + D++
Sbjct: 363 MMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVK 422
Query: 436 RGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWND---ARMLREKSEISTATKKIPGC 490
+ +++P + G +VLL N+Y+ GRW D R L +K+ + +T + C
Sbjct: 423 LAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTIC 480
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 242 bits (617), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 143/492 (29%), Positives = 269/492 (54%), Gaps = 24/492 (4%)
Query: 2 SRFCSTLTKPFHSDHCCRLASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVAD 61
S+ S+L + R+AS + ++QI++ ++ ALIS + + +
Sbjct: 222 SKMNSSLVNVYAKCGDLRMASYM-----LEQIREPDDHSLS-ALISGYANCGR------- 268
Query: 62 ASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVF 121
++ + LFD+ + ++N+MI + ++ + ++L++F + ++ + +
Sbjct: 269 --VNESRGLFDRKSNRCVILWNSMISGY-IANNMKMEALVLFNEMRNET--REDSRTLAA 323
Query: 122 TFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKD 181
AC ++ G+Q+ HA K GL ++ V + L+ MY K G K+F D
Sbjct: 324 VINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYD 383
Query: 182 LYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQ 241
N+MI Y G + AK +F+ ++ + ++SW+++ G+ Q GC +E L++FH+M +
Sbjct: 384 TILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHK 443
Query: 242 VGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIES 301
+ +E + S ++AC+++ +L+ G+ + + + ++ + +S+ID+Y KCG +E
Sbjct: 444 LDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEH 503
Query: 302 ASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACS 361
RVF + K PWN+MI G+A +G+ EAI +F+KM V + P ++TF+ +L AC+
Sbjct: 504 GRRVF-DTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACN 562
Query: 362 HGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIW 421
+ +VEEG+ F M D+G +P+ EH+ CMVDLL+RAG ++EA +++ MP D ++W
Sbjct: 563 YCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMW 622
Query: 422 GAVLNACRI--YKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSE 479
++L C YK M G + I E++P + +V L I+++SG W + ++R+
Sbjct: 623 SSILRGCVANGYKAM--GKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMR 680
Query: 480 ISTATKKIPGCS 491
+ TK PG S
Sbjct: 681 ENNVTKN-PGSS 691
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 143/295 (48%), Gaps = 35/295 (11%)
Query: 148 DSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDE 207
D N F N +I Y G + F+ ++D YSWN +++ + +G +S A+ LF+
Sbjct: 90 DRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNA 149
Query: 208 MQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQG 267
M E+DVV+ ++++ GY+ G EAL F ++ + T + L AC+ L AL G
Sbjct: 150 MPEKDVVTLNSLLHGYILNGYAEEALRLFK---ELNFSADAITLTTVLKACAELEALKCG 206
Query: 268 KWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESA------------------------- 302
K IH+ I G ++ + ++ +S++++YAKCG++ A
Sbjct: 207 KQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANC 266
Query: 303 -----SRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALL 357
SR ++ + R V WN+MI G+ + EA+ +F +M+ E ++ T A++
Sbjct: 267 GRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETREDSR-TLAAVI 325
Query: 358 NACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSM 412
NAC +E GK +G+I +I ++D+ S+ G EA + S +
Sbjct: 326 NACIGLGFLETGK-QMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEV 379
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/415 (21%), Positives = 199/415 (47%), Gaps = 43/415 (10%)
Query: 64 LSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTF 123
LS A +LF+ +P+ D+ N+++ + L+ + ++L +F+ L S + +
Sbjct: 140 LSVARRLFNAMPEKDVVTLNSLLHGYILNGYA-EEALRLFKELN----FSADAITLTTVL 194
Query: 124 GACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLY 183
AC +++ G+Q+ + + G++ + + ++L+ +Y K G + + E + D +
Sbjct: 195 KACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDH 254
Query: 184 SWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVG 243
S + +I+ Y G +++++ LFD + V+ W+++I+GY+ MEAL F+ M +
Sbjct: 255 SLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEM-RNE 313
Query: 244 PKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCG------ 297
+ + T + + AC L L+ GK +H + + + + ++++DMY+KCG
Sbjct: 314 TREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEAC 373
Query: 298 ----EIES---------------------ASRVFWEHNAKRKVWPWNAMIGGFAMHGKPS 332
E+ES A RVF E + + WN+M GF+ +G
Sbjct: 374 KLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVF-ERIENKSLISWNSMTNGFSQNGCTV 432
Query: 333 EAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCM 392
E ++ F +M ++ ++V+ ++++AC+ +E G+ F + G+ + +
Sbjct: 433 ETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFA-RATIVGLDSDQVVSSSL 491
Query: 393 VDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEM 447
+DL + G ++ + +M + +V W ++++ Y +G+ + K+M
Sbjct: 492 IDLYCKCGFVEHGRRVFDTMVKSDEVP-WNSMISG---YATNGQGFEAIDLFKKM 542
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 242 bits (617), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 149/438 (34%), Positives = 231/438 (52%), Gaps = 23/438 (5%)
Query: 67 AHKLFDQIPQPDLFIYNTMIKA------HSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFV 120
A ++F+++P + YN I +L PS VF L+ + S PN +FV
Sbjct: 183 AARMFEKVPHKSVVTYNAFISGLMENGVMNLVPS-------VFNLMRKFSSEEPNDVTFV 235
Query: 121 FTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVD- 179
AC + L++Q G Q+ +K V ALI MY K + VF D
Sbjct: 236 NAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDT 295
Query: 180 KDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQ----DVVSWSTIIAGYVQVGCFMEALDF 235
++L SWN++I+ + +G A ELF+++ + D +W+++I+G+ Q+G +EA F
Sbjct: 296 RNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKF 355
Query: 236 FHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAK 295
F RML V P+ S L+ACS++ L GK IH + + + + +L S+IDMY K
Sbjct: 356 FERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMK 415
Query: 296 CGEIESASRVF--WEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTF 353
CG A R+F +E K V+ WN MI G+ HG+ AI++F+ ++ E V P+ TF
Sbjct: 416 CGLSSWARRIFDRFEPKPKDPVF-WNVMISGYGKHGECESAIEIFELLREEKVEPSLATF 474
Query: 354 VALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMP 413
A+L+ACSH VE+G FRLM +YG P EH GCM+DLL R+G L+EA+++I M
Sbjct: 475 TAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMS 534
Query: 414 MAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARM 473
++L +CR + D G + E++P + V+L +IY++ RW D
Sbjct: 535 EPSSSVY-SSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALERWEDVES 593
Query: 474 LREKSEISTATKKIPGCS 491
+R+ + K+PG S
Sbjct: 594 IRQVID-QKQLVKLPGLS 610
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 185/393 (47%), Gaps = 51/393 (12%)
Query: 13 HSDHCCRLASLVDTCKSIQQIKQ---THAQLVTTALISHHVSANKFLKLVADA-SLSYAH 68
HS + L+ +C + + Q HAQ+V T +A + + ++ A
Sbjct: 27 HSPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDAL 86
Query: 69 KLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLL--TRDSGLSPNRYSFVFTFGAC 126
K+ D++P+ + N + L C D+ FR+ R SG N + G C
Sbjct: 87 KVLDEMPERGIASVNAAVSGL-LENGFCRDA---FRMFGDARVSGSGMNSVTVASVLGGC 142
Query: 127 GNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWN 186
G+ ++ G Q+ A+K G + V+V +L+ MY + G EW +
Sbjct: 143 GD---IEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCG---------EWVL-------- 182
Query: 187 TMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGP-K 245
A +F+++ + VV+++ I+G ++ G F+ M + +
Sbjct: 183 --------------AARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEE 228
Query: 246 PNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRV 305
PN+ TFV+A+ AC++L+ L G+ +H + + E + + ++IDMY+KC +SA V
Sbjct: 229 PNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIV 288
Query: 306 FWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSH-GY 364
F E R + WN++I G ++G+ A+++F+K+ E + P+ T+ +L++ S G
Sbjct: 289 FTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGK 348
Query: 365 MVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLS 397
++E K + R++ ++P ++ C+ LLS
Sbjct: 349 VIEAFKFFERML--SVVMVPSLK---CLTSLLS 376
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 241 bits (616), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 148/487 (30%), Positives = 251/487 (51%), Gaps = 10/487 (2%)
Query: 23 LVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIPQPDLFI 81
LV+ SI + Q HA+L+T+ A + LK + SY ++ I + L+
Sbjct: 28 LVEDSNSITHLFQVHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYRSIGK--LYC 85
Query: 82 YNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSH 141
N + KA+ +S S F +L G P+ Y+FV V G+
Sbjct: 86 ANPVFKAYLVSSSPKQALGFYFDILR--FGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQ 143
Query: 142 AVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQA 201
A+K G D + V N+L+ MY G ++ +K+F +D+ SWN++IA V +G++ A
Sbjct: 144 AIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAA 203
Query: 202 KELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNL 261
+LFDEM +++++SW+ +I+ Y+ ++ F M++ G + NE T V L AC
Sbjct: 204 HKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRS 263
Query: 262 VALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAM 321
L +G+ +H+ + R + + + ++IDMY KC E+ A R+F + + KV WN M
Sbjct: 264 ARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKV-TWNVM 322
Query: 322 IGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYG 381
I +HG+P +++F+ M + P++VTFV +L C+ +V +G+ Y+ LMV ++
Sbjct: 323 ILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQ 382
Query: 382 IIPEIEHYGCMVDLLSRAGLLKEAEDMISSMP---MAPDVAIWGAVLNACRIYKDMERGY 438
I P H CM +L S AG +EAE+ + ++P + P+ W +L++ R + G
Sbjct: 383 IKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGE 442
Query: 439 RIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNGT 498
I + + E DP + + LL NIYS +GRW D +RE + +IPGC ++L
Sbjct: 443 SIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVK-ERKIGRIPGCGLVDLKEI 501
Query: 499 FYQFLVG 505
+ +G
Sbjct: 502 VHGLRLG 508
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 241 bits (616), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 129/347 (37%), Positives = 201/347 (57%), Gaps = 2/347 (0%)
Query: 148 DSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDE 207
D + N +I Y +E +F ++D +SWN M++ Y GN+ A+ F++
Sbjct: 309 DRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEK 368
Query: 208 MQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQG 267
E+ VSW++IIA Y + + EA+D F RM G KP+ +T S L+A + LV L G
Sbjct: 369 TPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLG 428
Query: 268 KWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAM 327
+H + + I + + ++I MY++CGEI + R+F E KR+V WNAMIGG+A
Sbjct: 429 MQMHQIVVKTVIP-DVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAF 487
Query: 328 HGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIE 387
HG SEA+ +F MK + P+ +TFV++LNAC+H +V+E K F M+S Y I P++E
Sbjct: 488 HGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQME 547
Query: 388 HYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEM 447
HY +V++ S G +EA +I+SMP PD +WGA+L+ACRIY ++ + + +
Sbjct: 548 HYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRL 607
Query: 448 DPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIE 494
+P +VLL N+Y+ G W++A +R E S KK G S ++
Sbjct: 608 EPESSTPYVLLYNMYADMGLWDEASQVRMNME-SKRIKKERGSSWVD 653
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 173/409 (42%), Gaps = 94/409 (22%)
Query: 64 LSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTF 123
L A KLFD++P D F +NTMI ++ + ++L++F + + +S +S + T
Sbjct: 121 LEEARKLFDEMPSRDSFSWNTMISGYAKN-RRIGEALLLFEKMPERNAVS---WSAMIT- 175
Query: 124 GACGNGLSVQEGEQVRSHAVK---------VGLDSN-----------------------V 151
G C NG R VK GL N V
Sbjct: 176 GFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLV 235
Query: 152 FVVNALIGMYGKWGLVEYGRKVFEWAVD---------------KDLYSWNTMIAAYVGSG 196
+ N LI YG+ G VE R +F+ D K++ SWN+MI AY+ G
Sbjct: 236 YAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVG 295
Query: 197 NMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALA 256
++ A+ LFD+M+++D +SW+T+I GYV V +A F M PN
Sbjct: 296 DVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEM------PNR-------- 341
Query: 257 ACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVW 316
D W ++ YA G +E A R ++E ++
Sbjct: 342 --------DAHSW-----------------NMMVSGYASVGNVELA-RHYFEKTPEKHTV 375
Query: 317 PWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLM 376
WN++I + + EA+ +F +M +E P+ T +LL+A + + G +++
Sbjct: 376 SWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIV 435
Query: 377 VSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVL 425
V +IP++ + ++ + SR G + E+ + M + +V W A++
Sbjct: 436 VKT--VIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMI 482
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 87/187 (46%), Gaps = 43/187 (22%)
Query: 165 GLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYV 224
G + R +FE ++ +WNTMI+ YV M+QA++LFD M ++DVV+W+T+I+GYV
Sbjct: 54 GYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYV 113
Query: 225 QVGC---FMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKM 281
G EA F M P + +++
Sbjct: 114 SCGGIRFLEEARKLFDEM----PSRDSFSW------------------------------ 139
Query: 282 NERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKM 341
++I YAK I A +F E +R W+AMI GF +G+ A+ +F+KM
Sbjct: 140 -----NTMISGYAKNRRIGEALLLF-EKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKM 193
Query: 342 KVENVSP 348
V++ SP
Sbjct: 194 PVKDSSP 200
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 97/424 (22%), Positives = 171/424 (40%), Gaps = 93/424 (21%)
Query: 150 NVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGN---MSQAKELFD 206
N N +I Y K + RK+F+ +D+ +WNTMI+ YV G + +A++LFD
Sbjct: 70 NTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFLEEARKLFD 129
Query: 207 EMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAA-CSN----- 260
EM +D SW+T+I+GY + EAL F +M P+ N ++ + + C N
Sbjct: 130 EMPSRDSFSWNTMISGYAKNRRIGEALLLFEKM----PERNAVSWSAMITGFCQNGEVDS 185
Query: 261 ------------------LVA-------LDQGKWIHSFIGRGEIKMNERLL---ASIIDM 292
LVA L + W+ G + E L+ ++I
Sbjct: 186 AVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYG-SLVSGREDLVYAYNTLIVG 244
Query: 293 YAKCGEIESASRVFWE--------HNAK------RKVWPWNAMIGGFAMHGKPSEAIKVF 338
Y + G++E+A +F + H + + V WN+MI + G A +F
Sbjct: 245 YGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLF 304
Query: 339 QKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYF-----------RLMVSDYGIIPEIE 387
+MK + +++ +++ H +E+ F +MVS Y + +E
Sbjct: 305 DQMK----DRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVE 360
Query: 388 ---HY------------GCMVDLLSRAGLLKEAEDMISSMPMA---PDVAIWGAVLNACR 429
HY ++ + KEA D+ M + PD ++L+A
Sbjct: 361 LARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSAST 420
Query: 430 IYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARM----LREKSEISTATK 485
++ G ++ +I+ + V H L +YS G ++R ++ K E+ T
Sbjct: 421 GLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNA 480
Query: 486 KIPG 489
I G
Sbjct: 481 MIGG 484
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 143/427 (33%), Positives = 230/427 (53%), Gaps = 41/427 (9%)
Query: 70 LFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNG 129
+F +P ++F +N +I S S + S+ +F + R+S + P+ ++ AC
Sbjct: 89 VFWHMPYRNIFSWNIIIGEFSRS-GFASKSIDLFLRMWRESCVRPDDFTLPLILRACSAS 147
Query: 130 LSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMI 189
+ G+ + +K+G S++FV +AL+ MY
Sbjct: 148 REAKSGDLIHVLCLKLGFSSSLFVSSALVIMY---------------------------- 179
Query: 190 AAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEY 249
V G + A++LFD+M +D V ++ + GYVQ G M L F M G +
Sbjct: 180 ---VDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSV 236
Query: 250 TFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEH 309
VS L AC L AL GK +H + R + L +I DMY KC ++ A VF +
Sbjct: 237 VMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVF-VN 295
Query: 310 NAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEG 369
++R V W+++I G+ + G + K+F +M E + PN VTF+ +L+AC+HG +VE+
Sbjct: 296 MSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKS 355
Query: 370 KLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACR 429
LYFRLM +Y I+PE++HY + D +SRAGLL+EAE + MP+ PD A+ GAVL+ C+
Sbjct: 356 WLYFRLM-QEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCK 414
Query: 430 IYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLRE---KSEISTATKK 486
+Y ++E G R+ R + ++ P +V L +YS++GR+++A LR+ + +IS K
Sbjct: 415 VYGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQIS----K 470
Query: 487 IPGCSSI 493
+PGCSSI
Sbjct: 471 VPGCSSI 477
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 137/313 (43%), Gaps = 18/313 (5%)
Query: 40 LVTTALISHHVSANKFLKLVADASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDS 99
V++AL+ +V K L +A KLFD +P D +Y M + +
Sbjct: 170 FVSSALVIMYVDMGKLL---------HARKLFDDMPVRDSVLYTAMFGGY-VQQGEAMLG 219
Query: 100 LMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIG 159
L +FR + SG + + V ACG +++ G+ V ++ + + NA+
Sbjct: 220 LAMFREMGY-SGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITD 278
Query: 160 MYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTI 219
MY K +++Y VF +D+ SW+++I Y G++ + +LFDEM ++ + +
Sbjct: 279 MYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVT 338
Query: 220 IAGYVQV---GCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGR 276
G + G +E + R++Q E +++A C + L + F+
Sbjct: 339 FLGVLSACAHGGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEA--EKFLED 396
Query: 277 GEIKMNERLLASIIDMYAKCGEIESASRVFWE--HNAKRKVWPWNAMIGGFAMHGKPSEA 334
+K +E ++ +++ G +E RV E RK + + G ++ G+ EA
Sbjct: 397 MPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEA 456
Query: 335 IKVFQKMKVENVS 347
+ Q MK + +S
Sbjct: 457 ESLRQWMKEKQIS 469
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 131/346 (37%), Positives = 195/346 (56%), Gaps = 2/346 (0%)
Query: 188 MIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPN 247
++ Y SG++ A LF ++ +D++ W+ +I+GYVQ G E L ++ M Q P+
Sbjct: 149 LLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPD 208
Query: 248 EYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFW 307
+YTF S ACS L L+ GK H+ + + IK N + ++++DMY KC RVF
Sbjct: 209 QYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVF- 267
Query: 308 EHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVE 367
+ + R V W ++I G+ HGK SE +K F+KMK E PN VTF+ +L AC+HG +V+
Sbjct: 268 DQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVD 327
Query: 368 EGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNA 427
+G +F M DYGI PE +HY MVD L RAG L+EA + + P +WG++L A
Sbjct: 328 KGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGA 387
Query: 428 CRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKI 487
CRI+ +++ E+DP + G +V+ N Y+S G A +R K E + KK
Sbjct: 388 CRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKME-NAGVKKD 446
Query: 488 PGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVP 533
PG S IEL G ++F+ D SH S ++Y + EMT+ Y P
Sbjct: 447 PGYSQIELQGEVHRFMKDDTSHRLSEKIYKKVHEMTSFFMDIDYYP 492
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 140/315 (44%), Gaps = 40/315 (12%)
Query: 21 ASLVDTCKSIQQI---KQTHAQLVTTALISHHVSANKFLKLVA-DASLSYAHKLFDQIPQ 76
A L+ CK ++ K+ HAQ+ + K L L A L A LF +
Sbjct: 112 AVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKI 171
Query: 77 PDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGE 136
DL +N MI + + + L ++ + R + + P++Y+F F AC ++ G+
Sbjct: 172 RDLIPWNAMISGY-VQKGLEQEGLFIYYDM-RQNRIVPDQYTFASVFRACSALDRLEHGK 229
Query: 137 QVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSG 196
+ + +K + SN+ V +AL+ MY K G +VF+ +++ +W ++I+ Y G
Sbjct: 230 RAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHG 289
Query: 197 NMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALA 256
+S+ + F++M+E+ GC +PN TF+ L
Sbjct: 290 KVSEVLKCFEKMKEE---------------GC----------------RPNPVTFLVVLT 318
Query: 257 ACSNLVALDQGKWIHSFIGRGE--IKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRK 314
AC++ +D+G W H + + + I+ + A+++D + G ++ A + K
Sbjct: 319 ACNHGGLVDKG-WEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEH 377
Query: 315 VWPWNAMIGGFAMHG 329
W +++G +HG
Sbjct: 378 PPVWGSLLGACRIHG 392
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 5/138 (3%)
Query: 240 LQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEI 299
LQV P+ T+ L C +GK IH+ + +NE L ++ +YA G++
Sbjct: 104 LQVEPE----TYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDL 159
Query: 300 ESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNA 359
++A +F R + PWNAMI G+ G E + ++ M+ + P++ TF ++ A
Sbjct: 160 QTAGILFRSLKI-RDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRA 218
Query: 360 CSHGYMVEEGKLYFRLMV 377
CS +E GK +M+
Sbjct: 219 CSALDRLEHGKRAHAVMI 236
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 239 bits (610), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 145/466 (31%), Positives = 228/466 (48%), Gaps = 38/466 (8%)
Query: 61 DASLSYAHKLFDQIPQPDLFIYNTMI----KAHSLSPSSCNDSLMVFRLLTRDSGLSPNR 116
+ SL A KLF +P ++ YN MI + ++ + +++ +F + R GL P+
Sbjct: 300 NGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQR-RGLEPSP 358
Query: 117 YSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEW 176
+F AC +++ G Q+ + K S+ F+ +ALI +Y G E G + F
Sbjct: 359 STFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFA- 417
Query: 177 AVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFF 236
+QD+ SW+++I +VQ A D F
Sbjct: 418 ------------------------------STSKQDIASWTSMIDCHVQNEQLESAFDLF 447
Query: 237 HRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKC 296
++ +P EYT ++AC++ AL G+ I + + I + S I MYAK
Sbjct: 448 RQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKS 507
Query: 297 GEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVAL 356
G + A++VF E V ++AMI A HG +EA+ +F+ MK + PN+ F+ +
Sbjct: 508 GNMPLANQVFIEVQ-NPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGV 566
Query: 357 LNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAP 416
L AC HG +V +G YF+ M +DY I P +H+ C+VDLL R G L +AE++I S
Sbjct: 567 LIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQD 626
Query: 417 DVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLRE 476
W A+L++CR+YKD G R+ + E++P G +VLL NIY+ SG + A +RE
Sbjct: 627 HPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRE 686
Query: 477 KSEISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEM 522
KK P S I + + F V D SHP S+ +Y+ L+ M
Sbjct: 687 LMR-DRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTMLETM 731
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 176/388 (45%), Gaps = 46/388 (11%)
Query: 64 LSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTF 123
L +A +LFD++P+ ++ +N++I ++ + M L R++ L +++++
Sbjct: 98 LGFARQLFDRMPERNIISFNSLISGYT--QMGFYEQAMELFLEAREANLKLDKFTYAGAL 155
Query: 124 GACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLY 183
G CG + GE + V GL VF++N LI MY K G ++ +F+ ++D
Sbjct: 156 GFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQV 215
Query: 184 SWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVG 243
SWN++ I+GYV+VG E L+ +M + G
Sbjct: 216 SWNSL-------------------------------ISGYVRVGAAEEPLNLLAKMHRDG 244
Query: 244 PKPNEYTFVSALAACS---NLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIE 300
Y S L AC N +++G IH + + ++ + + +++DMYAK G ++
Sbjct: 245 LNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLK 304
Query: 301 SASRVFWEHNAKRKVWPWNAMIGGFAMHGK-----PSEAIKVFQKMKVENVSPNKVTFVA 355
A ++F +K V +NAMI GF + SEA K+F M+ + P+ TF
Sbjct: 305 EAIKLFSLMPSK-NVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSV 363
Query: 356 LLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYG-CMVDLLSRAGLLKEAEDMISSMPM 414
+L ACS +E G+ L+ + E G +++L + G ++ +S
Sbjct: 364 VLKACSAAKTLEYGRQIHALICKNN--FQSDEFIGSALIELYALMGSTEDGMQCFASTS- 420
Query: 415 APDVAIWGAVLNACRIYKDMERGYRIGR 442
D+A W ++++ + +E + + R
Sbjct: 421 KQDIASWTSMIDCHVQNEQLESAFDLFR 448
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 121/297 (40%), Gaps = 35/297 (11%)
Query: 28 KSIQQIKQTHAQLVTTALISHHVSANKFLKLVA-DASLSYAHKLFDQIPQPDLFIYNTMI 86
K+++ +Q HA + S + ++L A S + F + D+ + +MI
Sbjct: 372 KTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMI 431
Query: 87 KAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVG 146
H + + +FR L S + P Y+ AC + ++ GEQ++ +A+K G
Sbjct: 432 DCH-VQNEQLESAFDLFRQLF-SSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSG 489
Query: 147 LDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFD 206
+D+ V + I MY K G NM A ++F
Sbjct: 490 IDAFTSVKTSSISMYAKSG-------------------------------NMPLANQVFI 518
Query: 207 EMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQ 266
E+Q DV ++S +I+ Q G EAL+ F M G KPN+ F+ L AC + + Q
Sbjct: 519 EVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQ 578
Query: 267 G-KWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMI 322
G K+ I NE+ ++D+ + G + A + + W A++
Sbjct: 579 GLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALL 635
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 100/213 (46%), Gaps = 23/213 (10%)
Query: 200 QAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNE-------YTFV 252
+AK F+ + + +V T+I V +G +R L +P Y +
Sbjct: 6 RAKTFFNNIAQDSLV---TLITKRVGLG---------YRFLSSLCQPKNTALDSEGYKIL 53
Query: 253 SALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAK 312
AA S V L GK H + + + LL ++++MY KC E+ A ++F + +
Sbjct: 54 FQTAAKSGSVVL--GKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLF-DRMPE 110
Query: 313 RKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLY 372
R + +N++I G+ G +A+++F + + N+ +K T+ L C ++ G+L
Sbjct: 111 RNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELL 170
Query: 373 FRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEA 405
L+V + G+ ++ ++D+ S+ G L +A
Sbjct: 171 HGLVVVN-GLSQQVFLINVLIDMYSKCGKLDQA 202
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 147/518 (28%), Positives = 271/518 (52%), Gaps = 28/518 (5%)
Query: 112 LSPNRYSFV-FTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYG 170
+SPN S+ G +G VQ+ + VK ++ NV ++ ++ K + +
Sbjct: 388 VSPNVVSWTTLILGLVDHGF-VQDCFGLLMEMVKREVEPNVVTLSGVLRACSK---LRHV 443
Query: 171 RKVFEWA-------VDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGY 223
R+V E VD ++ N+++ AY S + A + M+ +D +++++++ +
Sbjct: 444 RRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRF 503
Query: 224 VQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNE 283
++G AL + M G + ++ + ++A +NL AL+ GK +H + +
Sbjct: 504 NELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAA 563
Query: 284 RLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKV 343
+L S++DMY+KCG +E A +VF E A V WN ++ G A +G S A+ F++M++
Sbjct: 564 SVLNSLVDMYSKCGSLEDAKKVF-EEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRM 622
Query: 344 ENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLK 403
+ P+ VTF+ LL+ACS+G + + G YF++M Y I P++EHY +V +L RAG L+
Sbjct: 623 KETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLE 682
Query: 404 EAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYS 463
EA ++ +M + P+ I+ +L ACR ++ G + + P+ ++LL ++Y
Sbjct: 683 EATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYD 742
Query: 464 SSGRWNDARMLREKSEISTATKKIPGCSSIELNGTFYQFLVGDRSH-PQSRELYSFLDEM 522
SG+ A+ R +KK+ G S++E+ G + F+ D + ++ +Y+ ++ +
Sbjct: 743 ESGKPELAQKTRNLMTEKRLSKKL-GKSTVEVQGKVHSFVSEDVTRVDKTNGIYAEIESI 801
Query: 523 TTKLKIAGYVPVFGXXXXXXXXXXXXXTALSVHSEKLAIAFGLLNTAPGTPIRIVKNLRV 582
++K G P G S HS K A+ +G + +P P+ +VKN +
Sbjct: 802 KEEIKRFGS-PYRGNENA------------SFHSAKQAVVYGFIYASPEAPVHVVKNKIL 848
Query: 583 CRDCHQVTKFISKVYDRVIIVRDRTRYHHFKDGICSCK 620
C+DCH+ ++++ D+ I VRD + H FK+G CSCK
Sbjct: 849 CKDCHEFVSILTRLVDKKITVRDGNQVHIFKNGECSCK 886
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 122/508 (24%), Positives = 218/508 (42%), Gaps = 82/508 (16%)
Query: 17 CCRLASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKL-VADASLSYAHKLFDQIP 75
C R+ S ++ S + H ++ L+ + N L L + + A KLFD++
Sbjct: 27 CIRILSFCESNSSRIGL-HIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMS 85
Query: 76 QPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEG 135
+F + MI A + S + +L +F + SG PN ++F +C + G
Sbjct: 86 HRTVFAWTVMISAFTKSQEFAS-ALSLFEEMMA-SGTHPNEFTFSSVVRSCAGLRDISYG 143
Query: 136 EQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGS 195
+V +K G + N V ++L +Y K
Sbjct: 144 GRVHGSVIKTGFEGNSVVGSSLSDLYSK-------------------------------C 172
Query: 196 GNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSAL 255
G +A ELF +Q D +SW+ +I+ V + EAL F+ M++ G PNE+TFV L
Sbjct: 173 GQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLL 232
Query: 256 AACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKV 315
A S+ + L+ GK IHS I I +N L S++D Y++ ++E A RV + ++ V
Sbjct: 233 GA-SSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVL-NSSGEQDV 290
Query: 316 WPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGK----- 370
+ W +++ GF + + EA+ F +M+ + PN T+ A+L+ CS ++ GK
Sbjct: 291 FLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQ 350
Query: 371 ------------------LYFRLMVSD------YG--IIPEIEHYGCMVDLLSRAGLLKE 404
+Y + S+ +G + P + + ++ L G +++
Sbjct: 351 TIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQD 410
Query: 405 AEDMISSM---PMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGN- 460
++ M + P+V VL AC + + R I + HV +++GN
Sbjct: 411 CFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLR---RHVDGEMVVGNS 467
Query: 461 ---IYSSSGR----WNDARMLREKSEIS 481
Y+SS + WN R ++ + I+
Sbjct: 468 LVDAYASSRKVDYAWNVIRSMKRRDNIT 495
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/414 (21%), Positives = 172/414 (41%), Gaps = 55/414 (13%)
Query: 67 AHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGAC 126
A ++ + + D+F++ +++ + +++ F L R GL PN +++ C
Sbjct: 278 AVRVLNSSGEQDVFLWTSVVSGF-VRNLRAKEAVGTF-LEMRSLGLQPNNFTYSAILSLC 335
Query: 127 GNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWN 186
S+ G+Q+ S +KVG + + V NAL+ MY K E
Sbjct: 336 SAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEV----------------- 378
Query: 187 TMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKP 246
+A +F M +VVSW+T+I G V G + M++ +P
Sbjct: 379 -------------EASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEP 425
Query: 247 NEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVF 306
N T L ACS L + + IH+++ R + + S++D YA +++ A V
Sbjct: 426 NVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVI 485
Query: 307 WEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMV 366
+R + +++ F GK A+ V M + + ++++ ++A ++ +
Sbjct: 486 RSMK-RRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGAL 544
Query: 367 EEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIW----- 421
E GK + G +VD+ S+ G L++A+ + + PDV W
Sbjct: 545 ETGK-HLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIA-TPDVVSWNGLVS 602
Query: 422 -----GAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWND 470
G + +A +++M +KE +P+ V +LL S+GR D
Sbjct: 603 GLASNGFISSALSAFEEMR--------MKETEPDSVTFLILLS--ACSNGRLTD 646
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 140/348 (40%), Gaps = 73/348 (20%)
Query: 20 LASLVDTCKSIQQIK---QTHAQLVTTALISHHVSANKFLKLVADA-SLSYAHKLFDQIP 75
L+ ++ C ++ ++ + HA L+ + V N + A + + YA + +
Sbjct: 430 LSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMK 489
Query: 76 QPDLFIYNTMI-KAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQE 134
+ D Y +++ + + L +L V + D G+ ++ S A N +++
Sbjct: 490 RRDNITYTSLVTRFNELGKHEM--ALSVINYMYGD-GIRMDQLSLPGFISASANLGALET 546
Query: 135 GEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVG 194
G+ + ++VK G V+N+L+ MY K G +E +KVFE D+ SWN +++
Sbjct: 547 GKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLAS 606
Query: 195 SGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSA 254
+G +S A F+EM+ ++ +P+ TF+
Sbjct: 607 NGFISSALSAFEEMRMKET-------------------------------EPDSVTFLIL 635
Query: 255 LAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRK 314
L+ACSN D G ++ + +I +N + +
Sbjct: 636 LSACSNGRLTDLG----------------------LEYFQVMKKI---------YNIEPQ 664
Query: 315 VWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSH 362
V + ++G G+ EA V + M ++ PN + F LL AC +
Sbjct: 665 VEHYVHLVGILGRAGRLEEATGVVETM---HLKPNAMIFKTLLRACRY 709
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 152/517 (29%), Positives = 252/517 (48%), Gaps = 48/517 (9%)
Query: 26 TCKSIQQI---KQTHAQLVTTALISH-HVSANKFLKLVADASLSYAHKLFDQIPQPDLFI 81
C +++I + H+ L L H++ + + + YA KLFD+I + D
Sbjct: 141 ACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVS 200
Query: 82 YNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSH 141
+N+MI +S D++ +FR + + G P+ + V GAC + ++ G +
Sbjct: 201 WNSMISGYS-EAGYAKDAMDLFRKM-EEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEM 258
Query: 142 AVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQA 201
A+ + + F+ + LI MYGK G++ A
Sbjct: 259 AITKKIGLSTFLGSKLISMYGK-------------------------------CGDLDSA 287
Query: 202 KELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNL 261
+ +F++M ++D V+W+ +I Y Q G EA F M + G P+ T + L+AC ++
Sbjct: 288 RRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSV 347
Query: 262 VALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAM 321
AL+ GK I + ++ N + ++DMY KCG +E A RVF K + WNAM
Sbjct: 348 GALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEA-TWNAM 406
Query: 322 IGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYG 381
I +A G EA+ +F +M +V P+ +TF+ +L+AC H +V +G YF M S +G
Sbjct: 407 ITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFG 463
Query: 382 IIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIG 441
++P+IEHY ++DLLSRAG+L EA + + P PD + A+L AC KD+ +
Sbjct: 464 LVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAM 523
Query: 442 RIIKEM-DPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNGTFY 500
R++ EM + + G +V+ N+ + W+++ +R K PGCS IE+ G
Sbjct: 524 RMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMR-DRGVVKTPGCSWIEIEGELM 582
Query: 501 QFLVGDRSHPQSRE----LYSFL-DEMTTKLKIAGYV 532
+FL G RE L+ L +EM + GY+
Sbjct: 583 EFLAGSDYLQCGREDSGSLFDLLVEEMKRERYEFGYI 619
Score = 186 bits (472), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 124/407 (30%), Positives = 208/407 (51%), Gaps = 42/407 (10%)
Query: 23 LVDTCKSIQQIKQTHAQLVTTALISHHVSANKFL--KLVADASLSYAHKLFDQIPQPDLF 80
L+ C S+ Q++Q AQ++ H V FL K V +Y+ LF +P+ +
Sbjct: 43 LLKKCISVNQLRQIQAQMLL-----HSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPNHY 97
Query: 81 IYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRS 140
+N MI+ + + + +L ++R + + SGL P+++++ F F AC + G V S
Sbjct: 98 SFNYMIRGLTNTWNDHEAALSLYRRM-KFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHS 156
Query: 141 HAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQ 200
KVGL+ +V + ++LI M Y G +
Sbjct: 157 SLFKVGLERDVHINHSLIMM-------------------------------YAKCGQVGY 185
Query: 201 AKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSN 260
A++LFDE+ E+D VSW+++I+GY + G +A+D F +M + G +P+E T VS L ACS+
Sbjct: 186 ARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSH 245
Query: 261 LVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNA 320
L L G+ + +I ++ L + +I MY KCG+++SA RVF + K +V W A
Sbjct: 246 LGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRV-AWTA 304
Query: 321 MIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDY 380
MI ++ +GK SEA K+F +M+ VSP+ T +L+AC +E GK S+
Sbjct: 305 MITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGK-QIETHASEL 363
Query: 381 GIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNA 427
+ I +VD+ + G ++EA + +MP+ + A W A++ A
Sbjct: 364 SLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNE-ATWNAMITA 409
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 146/302 (48%), Gaps = 22/302 (7%)
Query: 20 LASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFL--KLVAD----ASLSYAHKLFDQ 73
L S++ C + ++ +L+ I+ + + FL KL++ L A ++F+Q
Sbjct: 236 LVSMLGACSHLGDLRT--GRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQ 293
Query: 74 IPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQ 133
+ + D + MI +S + S + F + +G+SP+ + ACG+ +++
Sbjct: 294 MIKKDRVAWTAMITVYSQNGKSSEAFKLFFEM--EKTGVSPDAGTLSTVLSACGSVGALE 351
Query: 134 EGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYV 193
G+Q+ +HA ++ L N++V L+ MYGK G VE +VFE K+ +WN MI AY
Sbjct: 352 LGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYA 411
Query: 194 GSGNMSQAKELFDEMQ-EQDVVSWSTIIAGYVQVGCFMEALDFFHR---MLQVGPKPNEY 249
G+ +A LFD M +++ +++ V G + +FH M + PK Y
Sbjct: 412 HQGHAKEALLLFDRMSVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHY 471
Query: 250 TFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEI---ESASRVF 306
T + L + + + LD+ W F+ R K +E +LA+I+ K ++ E A R+
Sbjct: 472 TNIIDLLSRAGM--LDEA-W--EFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRML 526
Query: 307 WE 308
E
Sbjct: 527 ME 528
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 124/347 (35%), Positives = 207/347 (59%), Gaps = 8/347 (2%)
Query: 181 DLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRML 240
D+Y ++++ Y SG + A ++F+EM E++VVSW+ +I+G+ Q L + +M
Sbjct: 154 DVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMR 213
Query: 241 QVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIE 300
+ PN+YTF + L+AC+ AL QG+ +H +K + S+I MY KCG+++
Sbjct: 214 KSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLK 273
Query: 301 SASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVEN-VSPNKVTFVALLNA 359
A R+F + + + V WN+MI G+A HG +AI++F+ M ++ P+ +T++ +L++
Sbjct: 274 DAFRIF-DQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSS 332
Query: 360 CSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVA 419
C H +V+EG+ +F LM +++G+ PE+ HY C+VDLL R GLL+EA ++I +MPM P+
Sbjct: 333 CRHAGLVKEGRKFFNLM-AEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSV 391
Query: 420 IWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSE 479
IWG++L +CR++ D+ G R ++P+ HV L N+Y+S G W +A +R K
Sbjct: 392 IWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVR-KLM 450
Query: 480 ISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSRE----LYSFLDEM 522
K PGCS IE+N + F D S+ + E L+ +D M
Sbjct: 451 KDKGLKTNPGCSWIEINNYVFMFKAEDGSNCRMLEIVHVLHCLIDHM 497
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 155/369 (42%), Gaps = 42/369 (11%)
Query: 20 LASLVDTC---KSIQQIKQTHAQLVTTALISHHVSANKFLKLVADA-SLSYAHKLFDQIP 75
L+S V +C + + H + IS + + L D+ + A+K+F+++P
Sbjct: 123 LSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMP 182
Query: 76 QPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEG 135
+ ++ + MI + D + R S PN Y+F AC ++ +G
Sbjct: 183 ERNVVSWTAMISGFAQEWRV--DICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQG 240
Query: 136 EQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGS 195
V + +GL S + + N+LI MY K G ++ ++F+ +KD+ SWN+MIA Y
Sbjct: 241 RSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQH 300
Query: 196 GNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSAL 255
G QA ELF+ M M + G KP+ T++ L
Sbjct: 301 GLAMQAIELFELM------------------------------MPKSGTKPDAITYLGVL 330
Query: 256 AACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKV 315
++C + + +G+ + + +K + ++D+ + G ++ A + K
Sbjct: 331 SSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNS 390
Query: 316 WPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPN-KVTFVALLNA-CSHGYMVEEGKLYF 373
W +++ +HG I+ ++ + + P+ T V L N S GY E +
Sbjct: 391 VIWGSLLFSCRVHGDVWTGIRAAEERLM--LEPDCAATHVQLANLYASVGYWKEAATV-- 446
Query: 374 RLMVSDYGI 382
R ++ D G+
Sbjct: 447 RKLMKDKGL 455
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 88/197 (44%), Gaps = 11/197 (5%)
Query: 247 NEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVF 306
+ Y SA+ +C G H +G + L +S++ +Y GE+E+A +VF
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVF 178
Query: 307 WEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMV 366
E +R V W AMI GFA + +K++ KM+ PN TF ALL+AC+ +
Sbjct: 179 -EEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGAL 237
Query: 367 EEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEA---------EDMISSMPMAPD 417
+G+ G+ + ++ + + G LK+A +D++S M
Sbjct: 238 GQGR-SVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAG 296
Query: 418 VAIWGAVLNACRIYKDM 434
A G + A +++ M
Sbjct: 297 YAQHGLAMQAIELFELM 313
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 102/236 (43%), Gaps = 9/236 (3%)
Query: 20 LASLVDTCK---SIQQIKQTHAQLVTTALISH-HVSANKFLKLVADASLSYAHKLFDQIP 75
+L+ C ++ Q + H Q + L S+ H+S + L A ++FDQ
Sbjct: 224 FTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFS 283
Query: 76 QPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEG 135
D+ +N+MI ++ ++ +F L+ SG P+ +++ +C + V+EG
Sbjct: 284 NKDVVSWNSMIAGYA-QHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEG 342
Query: 136 EQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFE-WAVDKDLYSWNTMIAAYVG 194
+ + + GL + + L+ + G++GL++ ++ E + + W +++ +
Sbjct: 343 RKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRV 402
Query: 195 SGNMSQAKELFDE--MQEQDVVSWSTIIAG-YVQVGCFMEALDFFHRMLQVGPKPN 247
G++ +E M E D + +A Y VG + EA M G K N
Sbjct: 403 HGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTN 458
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 236 bits (603), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 121/342 (35%), Positives = 209/342 (61%), Gaps = 2/342 (0%)
Query: 186 NTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPK 245
N ++ Y NM A +F+ ++ +DVVSW+++I+ G EA++ F RM++ G
Sbjct: 525 NELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLS 584
Query: 246 PNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRV 305
+ + L+A ++L AL++G+ IH ++ R + + +++DMYA CG+++SA V
Sbjct: 585 ADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAV 644
Query: 306 FWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYM 365
F + ++ + + +MI + MHG A+++F KM+ ENVSP+ ++F+ALL ACSH +
Sbjct: 645 F-DRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGL 703
Query: 366 VEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVL 425
++EG+ + ++M +Y + P EHY C+VD+L RA + EA + + M P +W A+L
Sbjct: 704 LDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALL 763
Query: 426 NACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATK 485
ACR + + E G + + E++P + G VL+ N+++ GRWND +R K + S +
Sbjct: 764 AACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKAS-GME 822
Query: 486 KIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLK 527
K PGCS IE++G ++F D+SHP+S+E+Y L E+T KL+
Sbjct: 823 KHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLE 864
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 157/357 (43%), Gaps = 49/357 (13%)
Query: 28 KSIQQIKQTHAQLVTT-ALISHHVSANKFLKLVAD-ASLSYAHKLFDQIPQPDLFIYNTM 85
+++ Q +Q H+++ T A K + + SL A K+FD++P F +NTM
Sbjct: 94 RAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTM 153
Query: 86 IKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKV 145
I A+ + + + + + R G+ SF AC ++ G ++ S VK+
Sbjct: 154 IGAYVSNGEPASALALYWNM--RVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKL 211
Query: 146 GLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDK-DLYSWNTMIAAYVGSGNMSQAKEL 204
G S F+VNAL+ MY K + R++F+ +K D WN+++++Y SG
Sbjct: 212 GYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKS------ 265
Query: 205 FDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVAL 264
+E L+ F M GP PN YT VSAL AC
Sbjct: 266 -------------------------LETLELFREMHMTGPAPNSYTIVSALTACDGFSYA 300
Query: 265 DQGKWIHSFIGRGEIKMNERLLA-SIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIG 323
GK IH+ + + +E + ++I MY +CG++ A R+ + N V WN++I
Sbjct: 301 KLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLIK 359
Query: 324 GFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACS-----------HGYMVEEG 369
G+ + EA++ F M ++V+ +++ A H Y+++ G
Sbjct: 360 GYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHG 416
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 164/345 (47%), Gaps = 38/345 (11%)
Query: 22 SLVDTCKSIQQIK---QTHAQLVTTALISHHVSANKFLKLVA-DASLSYAHKLFDQIPQP 77
+L+ C ++ I+ + H+ LV S N + + A + LS A +LFD +
Sbjct: 187 ALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEK 246
Query: 78 -DLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGE 136
D ++N+++ ++S S S ++L +FR + +G +PN Y+ V AC + G+
Sbjct: 247 GDAVLWNSILSSYSTSGKSL-ETLELFREMHM-TGPAPNSYTIVSALTACDGFSYAKLGK 304
Query: 137 QVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSG 196
++ + +K S+ +LY N +IA Y G
Sbjct: 305 EIHASVLKSSTHSS------------------------------ELYVCNALIAMYTRCG 334
Query: 197 NMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALA 256
M QA+ + +M DVV+W+++I GYVQ + EAL+FF M+ G K +E + S +A
Sbjct: 335 KMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIA 394
Query: 257 ACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVW 316
A L L G +H+++ + N ++ ++IDMY+KC R F + K +
Sbjct: 395 ASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLI- 453
Query: 317 PWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACS 361
W +I G+A + EA+++F+ + + + +++ ++L A S
Sbjct: 454 SWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASS 498
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/407 (22%), Positives = 168/407 (41%), Gaps = 65/407 (15%)
Query: 73 QIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSV 132
Q+P P L ++ ++ F+ L SP +F + CG +V
Sbjct: 51 QVPSPKLACFDGVLTE-------------AFQRLDVSENNSPVE-AFAYVLELCGKRRAV 96
Query: 133 QEGEQVRSHAVKVGLDSNV-FVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAA 191
+G Q+ S K + F+ L+ MYGK
Sbjct: 97 SQGRQLHSRIFKTFPSFELDFLAGKLVFMYGK---------------------------- 128
Query: 192 YVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTF 251
G++ A+++FDEM ++ +W+T+I YV G AL + M G +F
Sbjct: 129 ---CGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSF 185
Query: 252 VSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNA 311
+ L AC+ L + G +HS + + ++ +++ MYAK ++ +A R+F
Sbjct: 186 PALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQE 245
Query: 312 KRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKL 371
K WN+++ ++ GK E +++F++M + +PN T V+ L AC + GK
Sbjct: 246 KGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKE 305
Query: 372 YFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIY 431
++ E+ ++ + +R G + +AE ++ M A DV W +++
Sbjct: 306 IHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNA-DVVTWNSLI------ 358
Query: 432 KDMERGYRIGRIIKE--------MDPNHVGCHVLLGNIYSSSGRWND 470
+GY + KE + H V + +I ++SGR ++
Sbjct: 359 ----KGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSN 401
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 137/290 (47%), Gaps = 35/290 (12%)
Query: 67 AHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGAC 126
A ++ Q+ D+ +N++IK + + ++L F + +G + S A
Sbjct: 339 AERILRQMNNADVVTWNSLIKGY-VQNLMYKEALEFFSDMIA-AGHKSDEVSMTSIIAAS 396
Query: 127 GNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWN 186
G ++ G ++ ++ +K G DSN+ V N LI MY K L Y
Sbjct: 397 GRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCY----------------- 439
Query: 187 TMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKP 246
M +A F M ++D++SW+T+IAGY Q C +EAL+ F + + +
Sbjct: 440 -----------MGRA---FLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEI 485
Query: 247 NEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVF 306
+E S L A S L ++ K IH I R + ++ + ++D+Y KC + A+RVF
Sbjct: 486 DEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVF 544
Query: 307 WEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVAL 356
E + V W +MI A++G SEA+++F++M +S + V + +
Sbjct: 545 -ESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCI 593
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/334 (20%), Positives = 143/334 (42%), Gaps = 69/334 (20%)
Query: 28 KSIQQIKQTHAQLVTTALISHHVSANKFLKLVADA-SLSYAHKLFDQIPQPDLFIYNTMI 86
KS+ +K+ H ++ L+ V N+ + + ++ YA ++F+ I D+ + +MI
Sbjct: 501 KSMLIVKEIHCHILRKGLLDT-VIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMI 559
Query: 87 KAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVG 146
+ +L+ + ++++ +FR + ++GLS + + + A + ++ +G ++ + ++ G
Sbjct: 560 SSSALNGNE-SEAVELFRRMV-ETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKG 617
Query: 147 LDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFD 206
+ A++ MY G ++ + VF+ K L + +MI AY G A ELFD
Sbjct: 618 FCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFD 677
Query: 207 EMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQ 266
+M+ ++V P+ +F++ L ACS+ LD+
Sbjct: 678 KMRHENV-------------------------------SPDHISFLALLYACSHAGLLDE 706
Query: 267 GKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFA 326
GRG +K+ EH + + WP + +
Sbjct: 707 --------GRGFLKI-------------------------MEHEYELEPWPEH-YVCLVD 732
Query: 327 MHGKPSEAIKVFQKMKVENVSPNKVTFVALLNAC 360
M G+ + ++ F+ +K+ P + ALL AC
Sbjct: 733 MLGRANCVVEAFEFVKMMKTEPTAEVWCALLAAC 766
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 236 bits (602), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 146/514 (28%), Positives = 253/514 (49%), Gaps = 41/514 (7%)
Query: 20 LASLVDTCKSIQQIKQ---THAQLVTTALISHHVSANKFLKLVADA-SLSYAHKLFDQIP 75
L +LV C + + H ++ + N L A + + A LF I
Sbjct: 166 LITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIA 225
Query: 76 QPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEG 135
+ D+ ++T+I + + + ++L+VF + D G PN + + AC +++G
Sbjct: 226 EKDVISWSTVIACY-VQNGAAAEALLVFNDMM-DDGTEPNVATVLCVLQACAAAHDLEQG 283
Query: 136 EQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGS 195
+ A++ GL++ V V AL+ M Y+
Sbjct: 284 RKTHELAIRKGLETEVKVSTALVDM-------------------------------YMKC 312
Query: 196 GNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRML-QVGPKPNEYTFVSA 254
+ +A +F + +DVVSW +I+G+ G +++ F ML + +P+ V
Sbjct: 313 FSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKV 372
Query: 255 LAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRK 314
L +CS L L+Q K HS++ + N + AS++++Y++CG + +AS+VF A +
Sbjct: 373 LGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVF-NGIALKD 431
Query: 315 VWPWNAMIGGFAMHGKPSEAIKVFQKM-KVENVSPNKVTFVALLNACSHGYMVEEGKLYF 373
W ++I G+ +HGK ++A++ F M K V PN+VTF+++L+ACSH ++ EG F
Sbjct: 432 TVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIF 491
Query: 374 RLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKD 433
+LMV+DY + P +EHY +VDLL R G L A ++ MP +P I G +L ACRI+++
Sbjct: 492 KLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQN 551
Query: 434 MERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSI 493
E + + + E++ NH G ++L+ N+Y G W + LR S KK S I
Sbjct: 552 GEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLR-NSVKQRGIKKGLAESLI 610
Query: 494 ELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLK 527
E+ ++F+ D HP+ +Y L E+ +K
Sbjct: 611 EIRRKVHRFVADDELHPEKEPVYGLLKELDLHMK 644
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 177/390 (45%), Gaps = 39/390 (10%)
Query: 67 AHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGAC 126
A ++FD++ +PD+ +++M+ + S ++ FR + S ++P+R + + AC
Sbjct: 115 ALRMFDELEKPDIVTWSSMVSGFEKNGSPYQ-AVEFFRRMVMASDVTPDRVTLITLVSAC 173
Query: 127 GNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWN 186
+ + G V ++ G +++ +VN+L+ Y K + +F+ +KD+ SW+
Sbjct: 174 TKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWS 233
Query: 187 TMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKP 246
T+IA YV Q G EAL F+ M+ G +P
Sbjct: 234 TVIACYV-------------------------------QNGAAAEALLVFNDMMDDGTEP 262
Query: 247 NEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVF 306
N T + L AC+ L+QG+ H R ++ ++ +++DMY KC E A VF
Sbjct: 263 NVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVF 322
Query: 307 WEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVE-NVSPNKVTFVALLNACSHGYM 365
++ V W A+I GF ++G +I+ F M +E N P+ + V +L +CS
Sbjct: 323 -SRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGF 381
Query: 366 VEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVL 425
+E+ K F V YG +V+L SR G L A + + + + D +W +++
Sbjct: 382 LEQAKC-FHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIAL-KDTVVWTSLI 439
Query: 426 NACRIYKDMERGYR-IGRIIK--EMDPNHV 452
I+ + ++K E+ PN V
Sbjct: 440 TGYGIHGKGTKALETFNHMVKSSEVKPNEV 469
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 173/362 (47%), Gaps = 36/362 (9%)
Query: 67 AHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGAC 126
A ++F ++ + L+ +NT++K+ S + L F + RD P+ ++ AC
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLS-REKQWEEVLYHFSHMFRDEE-KPDNFTLPVALKAC 70
Query: 127 GNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWN 186
G V GE + K + + DLY +
Sbjct: 71 GELREVNYGEMIHGFVKK------------------------------DVTLGSDLYVGS 100
Query: 187 TMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGP-K 245
++I Y+ G M +A +FDE+++ D+V+WS++++G+ + G +A++FF RM+
Sbjct: 101 SLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVT 160
Query: 246 PNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRV 305
P+ T ++ ++AC+ L G+ +H F+ R + L+ S+++ YAK + A +
Sbjct: 161 PDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNL 220
Query: 306 FWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYM 365
F + A++ V W+ +I + +G +EA+ VF M + PN T + +L AC+ +
Sbjct: 221 F-KMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHD 279
Query: 366 VEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVL 425
+E+G+ L + G+ E++ +VD+ + +EA + S +P DV W A++
Sbjct: 280 LEQGRKTHELAIRK-GLETEVKVSTALVDMYMKCFSPEEAYAVFSRIP-RKDVVSWVALI 337
Query: 426 NA 427
+
Sbjct: 338 SG 339
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 134/275 (48%), Gaps = 38/275 (13%)
Query: 201 AKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSN 260
A+++F EM ++ + W+T++ + + E L F M + KP+ +T AL AC
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 261 LVALDQGKWIHSFIGRGEIKMNERLL--ASIIDMYAKCGEIESASRVFWEHNAKRKVWPW 318
L ++ G+ IH F+ + ++ + L +S+I MY KCG + A R+F E K + W
Sbjct: 73 LREVNYGEMIHGFV-KKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELE-KPDIVTW 130
Query: 319 NAMIGGFAMHGKPSEAIKVFQKM-KVENVSPNKVTFVALLNACS-----------HGYMV 366
++M+ GF +G P +A++ F++M +V+P++VT + L++AC+ HG+++
Sbjct: 131 SSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVI 190
Query: 367 EEG-----------------KLYFRLMVSDYGIIPE--IEHYGCMVDLLSRAGLLKEAED 407
G F+ V+ + +I E + + ++ + G EA
Sbjct: 191 RRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALL 250
Query: 408 MISSM---PMAPDVAIWGAVLNACRIYKDMERGYR 439
+ + M P+VA VL AC D+E+G +
Sbjct: 251 VFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRK 285
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 234 bits (598), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 136/401 (33%), Positives = 217/401 (54%), Gaps = 12/401 (2%)
Query: 97 NDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNA 156
+L +F + L + + F +C G V +H+VK SN FV A
Sbjct: 29 EQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSNFLSNPFVGCA 88
Query: 157 LIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVV-- 214
L+ MYGK V + RK+F+ ++ WN MI+ Y G + +A EL++ M DV+
Sbjct: 89 LLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAM---DVMPN 145
Query: 215 --SWSTIIAGYV--QVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWI 270
S++ II G V + G + A++F+ +M++ KPN T ++ ++ACS + A K I
Sbjct: 146 ESSFNAIIKGLVGTEDGSY-RAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEI 204
Query: 271 HSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGK 330
HS+ R I+ + +L + +++ Y +CG I VF + R V W+++I +A+HG
Sbjct: 205 HSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVF-DSMEDRDVVAWSSLISAYALHGD 263
Query: 331 PSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYG 390
A+K FQ+M++ V+P+ + F+ +L ACSH + +E +YF+ M DYG+ +HY
Sbjct: 264 AESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYS 323
Query: 391 CMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPN 450
C+VD+LSR G +EA +I +MP P WGA+L ACR Y ++E R + ++P
Sbjct: 324 CLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPE 383
Query: 451 HVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCS 491
+ +VLLG IY S GR +A LR K + + K PG S
Sbjct: 384 NPANYVLLGKIYMSVGRQEEAERLRLKMK-ESGVKVSPGSS 423
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/347 (20%), Positives = 143/347 (41%), Gaps = 65/347 (18%)
Query: 36 THAQLVTTALISHHVSANKFLKLVADA-SLSYAHKLFDQIPQPDLFIYNTMI-------- 86
HA V + +S+ L + S+S+A KLFD+IPQ + ++N MI
Sbjct: 70 VHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGK 129
Query: 87 --------KAHSLSPSSCNDSLMVFRLLTRDSG---------------LSPNRYSFVFTF 123
+A + P+ + + ++ L+ + G PN + +
Sbjct: 130 VKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALV 189
Query: 124 GACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLY 183
AC + + +++ S+A + ++ + + + L+ YG+ G + Y + VF+ D+D+
Sbjct: 190 SACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVV 249
Query: 184 SWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVG 243
+W+++I+AY G+ A + F EM+ V
Sbjct: 250 AWSSLISAYALHGDAESALKTFQEMELAKVT----------------------------- 280
Query: 244 PKPNEYTFVSALAACSNLVALDQG-KWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESA 302
P++ F++ L ACS+ D+ + G ++ ++ + ++D+ ++ G E A
Sbjct: 281 --PDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEA 338
Query: 303 SRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEA-IKVFQKMKVENVSP 348
+V K W A++G +G+ A I + + VE +P
Sbjct: 339 YKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPENP 385
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 148/472 (31%), Positives = 242/472 (51%), Gaps = 43/472 (9%)
Query: 37 HAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSS 95
HA LVT+ + A K + + + A K+FD++P+ D+ MI A + +
Sbjct: 39 HAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARN-GY 97
Query: 96 CNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVN 155
+SL FR + +D GL + + A N L + G+ + +K +S+ F+V+
Sbjct: 98 YQESLDFFREMYKD-GLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVS 156
Query: 156 ALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQ------ 209
+LI MY K+G V RKVF ++DL +N MI+ Y + +A L +M+
Sbjct: 157 SLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKP 216
Query: 210 ---------------------------------EQDVVSWSTIIAGYVQVGCFMEALDFF 236
+ DVVSW++II+G V +A D F
Sbjct: 217 DVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAF 276
Query: 237 HRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKC 296
+ML G PN T ++ L AC+ L + GK IH + ++ + + ++++DMY KC
Sbjct: 277 KQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKC 336
Query: 297 GEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVAL 356
G I S + + + K+ +N+MI +A HG +A+++F +M+ + +TF A+
Sbjct: 337 GFI-SEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAI 395
Query: 357 LNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAP 416
L ACSH + + G+ F LM + Y I+P +EHY CMVDLL RAG L EA +MI +M M P
Sbjct: 396 LTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEP 455
Query: 417 DVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRW 468
D+ +WGA+L ACR + +ME + + E++P + G +LL ++Y+++G W
Sbjct: 456 DLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSW 507
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 150/299 (50%), Gaps = 6/299 (2%)
Query: 188 MIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPN 247
++ YV G + A+++FDEM ++D+ +I + G + E+LDFF M + G K +
Sbjct: 57 LVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLD 116
Query: 248 EYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFW 307
+ S L A NL+ + GK IH + + + + +++S+IDMY+K GE+ +A +VF
Sbjct: 117 AFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFS 176
Query: 308 EHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVE 367
+ ++ + +NAMI G+A + + EA+ + + MK+ + P+ +T+ AL++ SH E
Sbjct: 177 DL-GEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEE 235
Query: 368 EGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSM---PMAPDVAIWGAV 424
+ LM D G P++ + ++ L ++A D M + P+ A +
Sbjct: 236 KVSEILELMCLD-GYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITL 294
Query: 425 LNACRIYKDMERGYRI-GRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEIST 482
L AC M+ G I G + +H L ++Y G ++A +L K+ T
Sbjct: 295 LPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKT 353
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 165/582 (28%), Positives = 266/582 (45%), Gaps = 86/582 (14%)
Query: 22 SLVDTCKSIQQIK---QTHAQLVTTALISHHVSANKFLKLVADA-SLSYAHKLFDQIPQP 77
S++ C S+ + Q H +V + ++ + + + A + A L + +
Sbjct: 232 SVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVD 291
Query: 78 DLFIYNTMIKAHSLSPSSCNDSLMVF-RLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGE 136
D+ +N+MI + ++L +F R+ RD + FT + N ++ E
Sbjct: 292 DVVSWNSMI-VGCVRQGLIGEALSMFGRMHERDMKIDD------FTIPSILNCFALSRTE 344
Query: 137 -QVRSHA----VKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAA 191
++ S A VK G + V NAL+ MY K G+
Sbjct: 345 MKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGI------------------------- 379
Query: 192 YVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTF 251
M A ++F+ M E+DV+SW+ ++ G G + EAL F M G P++
Sbjct: 380 ------MDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVT 433
Query: 252 VSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNA 311
S L+A + L L+ G+ +H + + + S++ MY KCG +E A+ +F
Sbjct: 434 ASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEI 493
Query: 312 KRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKL 371
R + W +I G+A +G ++E+ +
Sbjct: 494 -RDLITWTCLIVGYAKNG-----------------------------------LLEDAQR 517
Query: 372 YFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIY 431
YF M + YGI P EHY CM+DL R+G + E ++ M + PD +W A+L A R +
Sbjct: 518 YFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKH 577
Query: 432 KDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCS 491
++E G R + + E++PN+ +V L N+YS++GR ++A +R + +K+ PGCS
Sbjct: 578 GNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKE-PGCS 636
Query: 492 SIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVFGXXXXXXXXXXXXXTA 551
+E G + F+ DR HP+ E+YS +DEM +K AGY
Sbjct: 637 WVEEKGKVHSFMSEDRRHPRMVEIYSKVDEMMLLIKEAGYFADMSFALHDLDKEGKEL-G 695
Query: 552 LSVHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFI 593
L+ HSEKLA+AFGLL G PIRI+KNLRVC DCH K +
Sbjct: 696 LAYHSEKLAVAFGLLVVPSGAPIRIIKNLRVCGDCHSAMKLL 737
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 152/294 (51%), Gaps = 7/294 (2%)
Query: 135 GEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVG 194
G + S+A + L SN+ L+G K G V+ R++F+ ++D ++WNTMI AY
Sbjct: 17 GSCIHSYADRTKLHSNL-----LLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSN 71
Query: 195 SGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSA 254
S +S A++LF ++ +SW+ +I+GY + G +EA + F M G KPNEYT S
Sbjct: 72 SRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSV 131
Query: 255 LAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRK 314
L C++LV L +G+ IH + ++ ++ ++ MYA+C I A +F ++
Sbjct: 132 LRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKN 191
Query: 315 VWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFR 374
W +M+ G++ +G +AI+ F+ ++ E N+ TF ++L AC+ G +
Sbjct: 192 NVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVG-VQVH 250
Query: 375 LMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNAC 428
+ G I ++D+ ++ ++ A ++ M + DV W +++ C
Sbjct: 251 CCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEV-DDVVSWNSMIVGC 303
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 119/480 (24%), Positives = 204/480 (42%), Gaps = 99/480 (20%)
Query: 67 AHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFR------------LLT------- 107
A ++FD++P+ D F +NTMI A+S S +D+ +FR L++
Sbjct: 47 ARQMFDKMPERDEFTWNTMIVAYSNS-RRLSDAEKLFRSNPVKNTISWNALISGYCKSGS 105
Query: 108 -----------RDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNA 156
+ G+ PN Y+ C + + + GEQ+ H +K G D +V VVN
Sbjct: 106 KVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNG 165
Query: 157 LIGMYGKWGLVEYGRKVFE-WAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVS 215
L+ MY + + +FE +K+ +W +M
Sbjct: 166 LLAMYAQCKRISEAEYLFETMEGEKNNVTWTSM--------------------------- 198
Query: 216 WSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIG 275
+ GY Q G +A++ F + + G + N+YTF S L AC+++ A G +H I
Sbjct: 199 ----LTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIV 254
Query: 276 RGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAI 335
+ K N + +++IDMYAKC E+ESA R E V WN+MI G G EA+
Sbjct: 255 KSGFKTNIYVQSALIDMYAKCREMESA-RALLEGMEVDDVVSWNSMIVGCVRQGLIGEAL 313
Query: 336 KVFQKMKVENVSPNKVTFVALLN------------ACSHGYMVEEGKLYFRL-------M 376
+F +M ++ + T ++LN + +H +V+ G ++L M
Sbjct: 314 SMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDM 373
Query: 377 VSDYGII------------PEIEHYGCMVDLLSRAGLLKEAEDMISSM---PMAPDVAIW 421
+ GI+ ++ + +V + G EA + +M + PD +
Sbjct: 374 YAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVT 433
Query: 422 GAVLNACRIYKDMERGYRI-GRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEI 480
+VL+A +E G ++ G IK P+ + + L +Y+ G DA ++ EI
Sbjct: 434 ASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEI 493
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 151/549 (27%), Positives = 275/549 (50%), Gaps = 60/549 (10%)
Query: 24 VDTCKS-------IQQIKQTHAQLVTTALISHHVSANKFLKLVADASL-SYAHKLFDQIP 75
V TC S +++ KQ+HA + + ++ L L YA +FD++
Sbjct: 277 VSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMF 336
Query: 76 QPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEG 135
+ D+ +N +I + + D++ + +L+ R L + + A +++ G
Sbjct: 337 EKDVVTWNLIISGY-VQQGLVEDAIYMCQLM-RLEKLKYDCVTLATLMSAAARTENLKLG 394
Query: 136 EQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGS 195
++V+ + ++ +S++ + + ++ MY K G + +KVF+ V+KDL WNT++AAY S
Sbjct: 395 KEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAES 454
Query: 196 G-----------------------------------NMSQAKELFDEMQEQ----DVVSW 216
G + +AK++F +MQ +++SW
Sbjct: 455 GLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISW 514
Query: 217 STIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGR 276
+T++ G VQ GC EA+ F +M + G +PN ++ AL+AC++L +L G+ IH +I R
Sbjct: 515 TTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIR 574
Query: 277 GEIKMNERLLASI----IDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPS 332
+ L SI +DMYAKCG+I A +VF ++ NAMI +A++G
Sbjct: 575 ---NLQHSSLVSIETSLVDMYAKCGDINKAEKVFGS-KLYSELPLSNAMISAYALYGNLK 630
Query: 333 EAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCM 392
EAI +++ ++ + P+ +T +L+AC+H + + F +VS + P +EHYG M
Sbjct: 631 EAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLM 690
Query: 393 VDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHV 452
VDLL+ AG ++A +I MP PD + +++ +C + E + R + E +P +
Sbjct: 691 VDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENS 750
Query: 453 GCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNGT--FYQFLVGDRSHP 510
G +V + N Y+ G W++ +RE + + KK PGCS I++ G + F+ D++H
Sbjct: 751 GNYVTISNAYAVEGSWDEVVKMREMMK-AKGLKKKPGCSWIQITGEEGVHVFVANDKTHT 809
Query: 511 QSRELYSFL 519
+ E+ L
Sbjct: 810 RINEIQMML 818
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/414 (25%), Positives = 188/414 (45%), Gaps = 40/414 (9%)
Query: 64 LSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTF 123
L A K+FD+IP + +N ++ + + +++ +F + R G+ P R +
Sbjct: 224 LDDASKVFDEIPDRNAVAWNALMVGY-VQNGKNEEAIRLFSDM-RKQGVEPTRVTVSTCL 281
Query: 124 GACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLY 183
A N V+EG+Q + A+ G++ + + +L+ Y K GL+EY VF+ +KD+
Sbjct: 282 SASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVV 341
Query: 184 SWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVG 243
+WN II+GYVQ G +A+ M
Sbjct: 342 TWN-------------------------------LIISGYVQQGLVEDAIYMCQLMRLEK 370
Query: 244 PKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESAS 303
K + T + ++A + L GK + + R + + L ++++DMYAKCG I A
Sbjct: 371 LKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAK 430
Query: 304 RVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHG 363
+VF + ++ + WN ++ +A G EA+++F M++E V PN +T+ ++ +
Sbjct: 431 KVF-DSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRN 489
Query: 364 YMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMP---MAPDVAI 420
V+E K F M S GIIP + + M++ + + G +EA + M + P+
Sbjct: 490 GQVDEAKDMFLQMQSS-GIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFS 548
Query: 421 WGAVLNACRIYKDMERGYRI-GRIIKEMD-PNHVGCHVLLGNIYSSSGRWNDAR 472
L+AC + G I G II+ + + V L ++Y+ G N A
Sbjct: 549 ITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAE 602
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 169/365 (46%), Gaps = 36/365 (9%)
Query: 63 SLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFT 122
+L A LF ++ ++F + +I C +LM F + + + P+ +
Sbjct: 122 ALEIAEVLFSKLRVRNVFSWAAIIGVKC-RIGLCEGALMGFVEMLENE-IFPDNFVVPNV 179
Query: 123 FGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDL 182
ACG + G V + VK GL+ VFV ++L MYGK G+++ KVF
Sbjct: 180 CKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVF-------- 231
Query: 183 YSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQV 242
DE+ +++ V+W+ ++ GYVQ G EA+ F M +
Sbjct: 232 -----------------------DEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQ 268
Query: 243 GPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESA 302
G +P T + L+A +N+ +++GK H+ ++++ L S+++ Y K G IE A
Sbjct: 269 GVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYA 328
Query: 303 SRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSH 362
VF + ++ V WN +I G+ G +AI + Q M++E + + VT L++A +
Sbjct: 329 EMVF-DRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAAR 387
Query: 363 GYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWG 422
++ GK + + +I ++D+ ++ G + +A+ + S + D+ +W
Sbjct: 388 TENLKLGK-EVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDS-TVEKDLILWN 445
Query: 423 AVLNA 427
+L A
Sbjct: 446 TLLAA 450
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 124/254 (48%), Gaps = 8/254 (3%)
Query: 179 DKDLYSWNTMIAA-----YVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEAL 233
+ D Y+ N I Y + A+ LF +++ ++V SW+ II ++G AL
Sbjct: 99 NGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGAL 158
Query: 234 DFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMY 293
F ML+ P+ + + AC L G+ +H ++ + ++ + +S+ DMY
Sbjct: 159 MGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMY 218
Query: 294 AKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTF 353
KCG ++ AS+VF E R WNA++ G+ +GK EAI++F M+ + V P +VT
Sbjct: 219 GKCGVLDDASKVFDEI-PDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTV 277
Query: 354 VALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMP 413
L+A ++ VEEGK + + + + I +++ + GL++ AE M+
Sbjct: 278 STCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTS-LLNFYCKVGLIEYAE-MVFDRM 335
Query: 414 MAPDVAIWGAVLNA 427
DV W +++
Sbjct: 336 FEKDVVTWNLIISG 349
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/461 (28%), Positives = 240/461 (52%), Gaps = 36/461 (7%)
Query: 67 AHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGAC 126
A LF ++ + D+ + TM+ + + S ++ +R + ++ G +R + A
Sbjct: 170 AEVLFGKMAKRDVICWTTMVTGFAQAGKSLK-AVEFYREM-QNEGFGRDRVVMLGLLQAS 227
Query: 127 GNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWN 186
G+ + G V + + GL NV V +L+ MY K G +E +VF
Sbjct: 228 GDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVF------------ 275
Query: 187 TMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKP 246
M + VSW ++I+G+ Q G +A + M +G +P
Sbjct: 276 -------------------SRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQP 316
Query: 247 NEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVF 306
+ T V L ACS + +L G+ +H +I + + ++ +++DMY+KCG + S+SR
Sbjct: 317 DLVTLVGVLVACSQVGSLKTGRLVHCYILKRHV-LDRVTATALMDMYSKCGAL-SSSREI 374
Query: 307 WEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMV 366
+EH ++ + WN MI + +HG E + +F KM N+ P+ TF +LL+A SH +V
Sbjct: 375 FEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLV 434
Query: 367 EEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLN 426
E+G+ +F +M++ Y I P +HY C++DLL+RAG ++EA DMI+S + + IW A+L+
Sbjct: 435 EQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLS 494
Query: 427 ACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKK 486
C ++++ G I +++P+ +G L+ N ++++ +W + +R K + A +K
Sbjct: 495 GCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVR-KLMRNGAMEK 553
Query: 487 IPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLK 527
+PG S+IE+NG FL+ D SH + + L + T+++
Sbjct: 554 VPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLRNLKTEIR 594
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 116/452 (25%), Positives = 219/452 (48%), Gaps = 45/452 (9%)
Query: 19 RLASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVAD----ASLSYAHKLFDQI 74
R+ L K + I Q HA +++T + + S ++ L+A +SYA K+FD++
Sbjct: 19 RIKFLQSISKLKRHITQIHAFVISTGNLLNGSSISR--DLIASCGRIGEISYARKVFDEL 76
Query: 75 PQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQE 134
PQ + +YN+MI +S + ++ L ++ + + + P+ +F T AC +GL +++
Sbjct: 77 PQRGVSVYNSMIVVYSRGKNP-DEVLRLYDQMIAEK-IQPDSSTFTMTIKACLSGLVLEK 134
Query: 135 GEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVG 194
GE V AV G ++VFV ++++ +Y K
Sbjct: 135 GEAVWCKAVDFGYKNDVFVCSSVLNLYMK------------------------------- 163
Query: 195 SGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSA 254
G M +A+ LF +M ++DV+ W+T++ G+ Q G ++A++F+ M G + +
Sbjct: 164 CGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGL 223
Query: 255 LAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRK 314
L A +L G+ +H ++ R + MN + S++DMYAK G IE ASRVF K
Sbjct: 224 LQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTA 283
Query: 315 VWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFR 374
V W ++I GFA +G ++A + +M+ P+ VT V +L ACS ++ G+L
Sbjct: 284 V-SWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHC 342
Query: 375 LMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDM 434
++ + ++ + M D+ S+ G L + ++ + D+ W +++ I+ +
Sbjct: 343 YILKRH-VLDRVTATALM-DMYSKCGALSSSREIFEHVG-RKDLVCWNTMISCYGIHGNG 399
Query: 435 ERGYRIGRIIKE--MDPNHVGCHVLLGNIYSS 464
+ + + E ++P+H LL + S
Sbjct: 400 QEVVSLFLKMTESNIEPDHATFASLLSALSHS 431
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 233 bits (595), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 138/477 (28%), Positives = 241/477 (50%), Gaps = 40/477 (8%)
Query: 63 SLSYAHKLFDQIP-QPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVF 121
S+ A K+FD++P + D ++N ++ +S D+L+VF + R+ G+ +R++
Sbjct: 210 SVEDAQKVFDELPDRDDSVLWNALVNGYS-QIFRFEDALLVFSKM-REEGVGVSRHTITS 267
Query: 122 TFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKD 181
A + G + AVK G S++ V NALI MYGK +W
Sbjct: 268 VLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKS----------KW----- 312
Query: 182 LYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQ 241
+ +A +F+ M E+D+ +W++++ + G L F RML
Sbjct: 313 ----------------LEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLC 356
Query: 242 VGPKPNEYTFVSALAACSNLVALDQGKWIHSF-IGRGEIKM---NERLLASIIDMYAKCG 297
G +P+ T + L C L +L QG+ IH + I G + NE + S++DMY KCG
Sbjct: 357 SGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCG 416
Query: 298 EIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALL 357
++ A VF K WN MI G+ + A+ +F M V P+++TFV LL
Sbjct: 417 DLRDARMVFDSMRVKDSA-SWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLL 475
Query: 358 NACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPD 417
ACSH + EG+ + M + Y I+P +HY C++D+L RA L+EA ++ S P+ +
Sbjct: 476 QACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDN 535
Query: 418 VAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREK 477
+W ++L++CR++ + + G+ + E++P H G +VL+ N+Y +G++ + +R+
Sbjct: 536 PVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDA 595
Query: 478 SEISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPV 534
KK PGCS I L + F G+++HP+ + ++ +L + + + Y+ V
Sbjct: 596 MR-QQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWLSLVISHMHGHEYMTV 651
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 153/357 (42%), Gaps = 52/357 (14%)
Query: 76 QPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRY------SFVFTFGACGNG 129
PDLF ++ PSS SL + ++ +P RY + + T C
Sbjct: 24 NPDLFA--------AIKPSSALASL--YSTVSGQIEENPKRYEHHNVATCIATLQRCAQR 73
Query: 130 LSVQEGEQVRSHAVKVG-LDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTM 188
G+Q+ V+ G LD + +L+ MY K GL+ VF +
Sbjct: 74 KDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGS----------- 122
Query: 189 IAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNE 248
E+DV ++ +I+G+V G ++A++ + M G P++
Sbjct: 123 ---------------------ERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDK 161
Query: 249 YTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWE 308
YTF S L S+ + L K +H + + + + ++ Y+K +E A +VF E
Sbjct: 162 YTFPSLLKG-SDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDE 220
Query: 309 HNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEE 368
+ WNA++ G++ + +A+ VF KM+ E V ++ T ++L+A + ++
Sbjct: 221 LPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDN 280
Query: 369 GKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVL 425
G+ L V G +I ++D+ ++ L+EA + +M D+ W +VL
Sbjct: 281 GRSIHGLAVKT-GSGSDIVVSNALIDMYGKSKWLEEANSIFEAMD-ERDLFTWNSVL 335
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 98/197 (49%), Gaps = 17/197 (8%)
Query: 241 QVGPKPNEY------TFVSALAACSNLVALDQGKWIHSFIGR-GEIKMNERLLASIIDMY 293
Q+ P Y T ++ L C+ G+ IH F+ R G + + R S+++MY
Sbjct: 47 QIEENPKRYEHHNVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMY 106
Query: 294 AKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTF 353
AKCG + A VF ++R V+ +NA+I GF ++G P +A++ +++M+ + P+K TF
Sbjct: 107 AKCGLMRRAVLVFG--GSERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTF 164
Query: 354 VALLNACSHGYMVEEGKLY---FRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMIS 410
+LL + + K++ F+L G + +V S+ +++A+ +
Sbjct: 165 PSLLKGSDAMELSDVKKVHGLAFKL-----GFDSDCYVGSGLVTSYSKFMSVEDAQKVFD 219
Query: 411 SMPMAPDVAIWGAVLNA 427
+P D +W A++N
Sbjct: 220 ELPDRDDSVLWNALVNG 236
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 140/446 (31%), Positives = 224/446 (50%), Gaps = 40/446 (8%)
Query: 53 NKFLKLVADASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGL 112
N +LK + A +FD++ + D+ + MI ++ ++L + RL+ + G+
Sbjct: 261 NMYLKC---GRMDEARFVFDRMERRDVITWTCMINGYT-EDGDVENALELCRLMQFE-GV 315
Query: 113 SPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRK 172
PN + CG+ L V +G+ + AV+ + S++ + +LI MY K V+ +
Sbjct: 316 RPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFR 375
Query: 173 VFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEA 232
VF A + WS IIAG VQ +A
Sbjct: 376 VFSGA-------------------------------SKYHTGPWSAIIAGCVQNELVSDA 404
Query: 233 LDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDM 292
L F RM + +PN T S L A + L L Q IH ++ + + ++ +
Sbjct: 405 LGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHV 464
Query: 293 YAKCGEIESASRVF---WEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPN 349
Y+KCG +ESA ++F E + + V W A+I G+ MHG A++VF +M V+PN
Sbjct: 465 YSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPN 524
Query: 350 KVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMI 409
++TF + LNACSH +VEEG FR M+ Y + HY C+VDLL RAG L EA ++I
Sbjct: 525 EITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLI 584
Query: 410 SSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWN 469
+++P P +WGA+L AC +++++ G + E++P + G +VLL NIY++ GRW
Sbjct: 585 TTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWK 644
Query: 470 DARMLREKSEISTATKKIPGCSSIEL 495
D +R E + +K PG S+IE+
Sbjct: 645 DMEKVRSMME-NVGLRKKPGHSTIEI 669
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 167/344 (48%), Gaps = 34/344 (9%)
Query: 28 KSIQQIKQTHAQLVTTALISHHVSANKFLKLVADASLSYAHKLFDQIPQPDLFIYNTMIK 87
+SI + K H ++T +S H+ + + ++YA KLF+++PQ L YN +I+
Sbjct: 29 QSISKTKALHCHVITGGRVSGHILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIR 88
Query: 88 AHSLSPSSCNDSLMVF-RLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVG 146
+ + +D++ VF R+++ P+ Y++ F A G S+
Sbjct: 89 MY-VREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSM-------------- 133
Query: 147 LDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFD 206
K GLV +GR + W +D Y N ++A Y+ G + A+++FD
Sbjct: 134 ----------------KLGLVVHGRILRSW-FGRDKYVQNALLAMYMNFGKVEMARDVFD 176
Query: 207 EMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQ 266
M+ +DV+SW+T+I+GY + G +AL F M+ + T VS L C +L L+
Sbjct: 177 VMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEM 236
Query: 267 GKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFA 326
G+ +H + + + ++++MY KCG ++ A VF + +R V W MI G+
Sbjct: 237 GRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVF-DRMERRDVITWTCMINGYT 295
Query: 327 MHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGK 370
G A+++ + M+ E V PN VT +L++ C V +GK
Sbjct: 296 EDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGK 339
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 147/293 (50%), Gaps = 8/293 (2%)
Query: 186 NTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPK 245
+T+ Y G+++ A++LF+EM + ++S++ +I YV+ G + +A+ F RM+ G K
Sbjct: 53 STLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVK 112
Query: 246 --PNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESAS 303
P+ YT+ A L ++ G +H I R ++ + +++ MY G++E A
Sbjct: 113 CVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMAR 172
Query: 304 RVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHG 363
VF + R V WN MI G+ +G ++A+ +F M E+V + T V++L C H
Sbjct: 173 DVF-DVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHL 231
Query: 364 YMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGA 423
+E G+ +L V + + +IE +V++ + G + EA + M DV W
Sbjct: 232 KDLEMGRNVHKL-VEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRME-RRDVITWTC 289
Query: 424 VLNACRIYKDMERGYRIGRIIK--EMDPNHVGCHVLLGNIYSSSGRWNDARML 474
++N D+E + R+++ + PN V L+ ++ + + ND + L
Sbjct: 290 MINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLV-SVCGDALKVNDGKCL 341
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 150/494 (30%), Positives = 247/494 (50%), Gaps = 37/494 (7%)
Query: 35 QTHAQLVTTALISHHVSANKFLKLVADAS-LSYAHKLFDQIPQPDLFIYNTMIKAHSLSP 93
Q H + + L + ++ + A L+ A ++FDQI +PD +N +I A +
Sbjct: 291 QIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVII-AGLANN 349
Query: 94 SSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFV 153
++++ VF + R SG P+ S A +++ +G Q+ S+ +K G +++ V
Sbjct: 350 GYADEAVSVFSQM-RSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTV 408
Query: 154 VNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQ-D 212
N+L+ M + DLY LF++ + D
Sbjct: 409 CNSLLTM---------------YTFCSDLYC----------------CFNLFEDFRNNAD 437
Query: 213 VVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHS 272
VSW+TI+ +Q +E L F ML +P+ T + L C + +L G +H
Sbjct: 438 SVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHC 497
Query: 273 FIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPS 332
+ + + + + +IDMYAKCG + A R+F + R V W+ +I G+A G
Sbjct: 498 YSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIF-DSMDNRDVVSWSTLIVGYAQSGFGE 556
Query: 333 EAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCM 392
EA+ +F++MK + PN VTFV +L ACSH +VEEG + M +++GI P EH C+
Sbjct: 557 EALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCV 616
Query: 393 VDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHV 452
VDLL+RAG L EAE I M + PDV +W +L+AC+ ++ + I ++DP +
Sbjct: 617 VDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNS 676
Query: 453 GCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNGTFYQFLVGDRSHPQS 512
HVLL ++++SSG W +A +LR S KKIPG S IE+ + F D HP+
Sbjct: 677 TAHVLLCSMHASSGNWENAALLR-SSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPER 735
Query: 513 RELYSFLDEMTTKL 526
++Y+ L + +++
Sbjct: 736 DDIYTVLHNIWSQM 749
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 113/439 (25%), Positives = 200/439 (45%), Gaps = 44/439 (10%)
Query: 22 SLVDTC---KSIQQIKQTHAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIPQP 77
SL+ C +S+ Q ++ H ++ + + N L + SL A ++FD +P+
Sbjct: 72 SLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPER 131
Query: 78 DLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQ 137
+L Y ++I +S + + ++L D L P++++F AC + V G+Q
Sbjct: 132 NLVSYTSVITGYSQNGQGAEAIRLYLKMLQED--LVPDQFAFGSIIKACASSSDVGLGKQ 189
Query: 138 VRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGN 197
+ + +K+ S++ NALI MY ++ + +VF KDL SW
Sbjct: 190 LHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISW------------ 237
Query: 198 MSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGP-KPNEYTFVSALA 256
S+IIAG+ Q+G EAL ML G PNEY F S+L
Sbjct: 238 -------------------SSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLK 278
Query: 257 ACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVW 316
ACS+L+ D G IH + E+ N S+ DMYA+CG + SA RVF + +
Sbjct: 279 ACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVF-DQIERPDTA 337
Query: 317 PWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLM 376
WN +I G A +G EA+ VF +M+ P+ ++ +LL A + + +G +
Sbjct: 338 SWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQG-MQIHSY 396
Query: 377 VSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYK---D 433
+ +G + ++ ++ + + L ++ D W +L AC ++ +
Sbjct: 397 IIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVE 456
Query: 434 MERGYRIGRIIKEMDPNHV 452
M R +++ ++ E +P+H+
Sbjct: 457 MLRLFKL-MLVSECEPDHI 474
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 181/446 (40%), Gaps = 54/446 (12%)
Query: 20 LASLVDTCKSIQQI---KQTHAQLVTTALISHHVSANKFLKL-VADASLSYAHKLFDQIP 75
S++ C S + KQ HAQ++ SH ++ N + + V +S A ++F IP
Sbjct: 171 FGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIP 230
Query: 76 QPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEG 135
DL ++++I S ++L + + PN Y F + AC + L G
Sbjct: 231 MKDLISWSSIIAGFSQLGFEF-EALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYG 289
Query: 136 EQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGS 195
Q+ +K L N +L MY + G + R+VF+ D SWN +IA +
Sbjct: 290 SQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANN 349
Query: 196 GNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSAL 255
G +A +F +M+ +G++ P+ + S L
Sbjct: 350 GYADEAVSVFSQMRS----------SGFI---------------------PDAISLRSLL 378
Query: 256 AACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKV 315
A + +AL QG IHS+I + + + S++ MY C ++ +F +
Sbjct: 379 CAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADS 438
Query: 316 WPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRL 375
WN ++ H +P E +++F+ M V P+ +T LL C VE L
Sbjct: 439 VSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGC-----VEISSLKLGS 493
Query: 376 MVSDY----GIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIY 431
V Y G+ PE ++D+ ++ G L +A + SM DV W ++ Y
Sbjct: 494 QVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMD-NRDVVSWSTLIVG---Y 549
Query: 432 KDMERGYRIGRIIKEM-----DPNHV 452
G + KEM +PNHV
Sbjct: 550 AQSGFGEEALILFKEMKSAGIEPNHV 575
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 148/330 (44%), Gaps = 37/330 (11%)
Query: 98 DSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNAL 157
++L F ++S +++ AC + S+ +G ++ H + + + N +
Sbjct: 49 EALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHI 108
Query: 158 IGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWS 217
+ MYGK G++ A+E+FD M E+++VS++
Sbjct: 109 LSMYGK-------------------------------CGSLRDAREVFDFMPERNLVSYT 137
Query: 218 TIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRG 277
++I GY Q G EA+ + +MLQ P+++ F S + AC++ + GK +H+ + +
Sbjct: 138 SVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKL 197
Query: 278 EIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKV 337
E + ++I MY + ++ ASRVF+ K + W+++I GF+ G EA+
Sbjct: 198 ESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLI-SWSSIIAGFSQLGFEFEALSH 256
Query: 338 FQKMKVENV-SPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGC-MVDL 395
++M V PN+ F + L ACS + G L + I GC + D+
Sbjct: 257 LKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIA--GCSLCDM 314
Query: 396 LSRAGLLKEAEDMISSMPMAPDVAIWGAVL 425
+R G L A + + PD A W ++
Sbjct: 315 YARCGFLNSARRVFDQIE-RPDTASWNVII 343
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 137/287 (47%), Gaps = 42/287 (14%)
Query: 230 MEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASI 289
+EA DF + K T++S + ACS+ +L QG+ IH I K + L I
Sbjct: 51 LEAFDFAQK--NSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHI 108
Query: 290 IDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPN 349
+ MY KCG + A VF + +R + + ++I G++ +G+ +EAI+++ KM E++ P+
Sbjct: 109 LSMYGKCGSLRDAREVF-DFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPD 167
Query: 350 KVTFVALLNACSHGYMVEEGK-----------------------LYFRL-MVSD-----Y 380
+ F +++ AC+ V GK +Y R +SD Y
Sbjct: 168 QFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFY 227
Query: 381 GI-IPEIEHYGCMVDLLSRAGLLKEA----EDMISSMPMAPDVAIWGAVLNACRIYKDME 435
GI + ++ + ++ S+ G EA ++M+S P+ I+G+ L AC +
Sbjct: 228 GIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPD 287
Query: 436 RGYRI-GRIIK-EMDPNHV-GCHVLLGNIYSSSGRWNDARMLREKSE 479
G +I G IK E+ N + GC L ++Y+ G N AR + ++ E
Sbjct: 288 YGSQIHGLCIKSELAGNAIAGCS--LCDMYARCGFLNSARRVFDQIE 332
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 133/417 (31%), Positives = 227/417 (54%), Gaps = 46/417 (11%)
Query: 99 SLMVFRLLTRDSGLSPNRYSFVFTFG-ACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNAL 157
+L+ FR R S + +S +F + S +G Q+ + K+G ++ + + +L
Sbjct: 47 ALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSL 106
Query: 158 IGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQE-QDVVSW 216
+G Y G V+Y R+V FDE E Q++V W
Sbjct: 107 VGFYSSVGDVDYARQV-------------------------------FDETPEKQNIVLW 135
Query: 217 STIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHS--FI 274
+ +I+ Y + +EA++ F RM + + AL+AC++L A+ G+ I+S
Sbjct: 136 TAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIK 195
Query: 275 GRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEA 334
+ + M+ L S+++MY K GE E A ++F E + ++ V + +MI G+A++G+ E+
Sbjct: 196 RKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDE-SMRKDVTTYTSMIFGYALNGQAQES 254
Query: 335 IKVFQKMKVEN------VSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEH 388
+++F+KMK + ++PN VTF+ +L ACSH +VEEGK +F+ M+ DY + P H
Sbjct: 255 LELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAH 314
Query: 389 YGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMD 448
+GCMVDL R+G LK+A + I+ MP+ P+ IW +L AC ++ ++E G + R I E+D
Sbjct: 315 FGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELD 374
Query: 449 PNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNGTFYQFLVG 505
+HVG +V L NIY+S G W++ +R++ +++PG S IEL +F+ G
Sbjct: 375 RDHVGDYVALSNIYASKGMWDEKSKMRDR----VRKRRMPGKSWIELGSIINEFVSG 427
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 144/303 (47%), Gaps = 36/303 (11%)
Query: 34 KQTHA---QLVTTALISHHVSANKFLKLVADASLSYAHKLFDQIPQP-DLFIYNTMIKAH 89
+Q HA +L A+I S F V D + YA ++FD+ P+ ++ ++ MI A+
Sbjct: 85 RQIHALVRKLGFNAVIQIQTSLVGFYSSVGD--VDYARQVFDETPEKQNIVLWTAMISAY 142
Query: 90 SLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVG--L 147
+ + +S +++ +F+ + + + + AC + +VQ GE++ S ++K L
Sbjct: 143 TENENSV-EAIELFKRMEAEK-IELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRL 200
Query: 148 DSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDE 207
++ + N+L+ MY K G E RK+F+ ++ KD+ ++ +MI Y +G ++ ELF +
Sbjct: 201 AMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKK 260
Query: 208 MQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQG 267
M+ D S T+I PN+ TF+ L ACS+ +++G
Sbjct: 261 MKTID-QSQDTVIT------------------------PNDVTFIGVLMACSHSGLVEEG 295
Query: 268 KW-IHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFA 326
K S I +K E ++D++ + G ++ A + K W ++G +
Sbjct: 296 KRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACS 355
Query: 327 MHG 329
+HG
Sbjct: 356 LHG 358
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 230 bits (586), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 147/474 (31%), Positives = 243/474 (51%), Gaps = 49/474 (10%)
Query: 29 SIQQIKQTHAQLVTTALISHHVSANKFLKL-VADASLSYAHKLFDQIPQPDLFIYNTMIK 87
++ Q K H LV + + L + V +S A ++F++ DL ++ MI
Sbjct: 257 ALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIV 316
Query: 88 AHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGL 147
++ S N++L +F+ + + + PN + CG +++ G V ++KVG+
Sbjct: 317 GYT-HNGSVNEALSLFQKM-KGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI 374
Query: 148 -DSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFD 206
D+NV NAL+ MY K Y + AK +F+
Sbjct: 375 WDTNV--ANALVHMYAKC----YQNR---------------------------DAKYVFE 401
Query: 207 EMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQ 266
E+D+V+W++II+G+ Q G EAL FHRM PN T S +AC++L +L
Sbjct: 402 MESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAV 461
Query: 267 GKWIHS------FIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNA 320
G +H+ F+ + + LL D YAKCG+ +SA R+ ++ ++ W+A
Sbjct: 462 GSSLHAYSVKLGFLASSSVHVGTALL----DFYAKCGDPQSA-RLIFDTIEEKNTITWSA 516
Query: 321 MIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDY 380
MIGG+ G ++++F++M + PN+ TF ++L+AC H MV EGK YF M DY
Sbjct: 517 MIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDY 576
Query: 381 GIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRI 440
P +HY CMVD+L+RAG L++A D+I MP+ PDV +GA L+ C ++ + G +
Sbjct: 577 NFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIV 636
Query: 441 GRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIE 494
+ + ++ P+ +VL+ N+Y+S GRWN A+ +R + KI G S++E
Sbjct: 637 IKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMK-QRGLSKIAGHSTME 689
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 107/349 (30%), Positives = 175/349 (50%), Gaps = 36/349 (10%)
Query: 23 LVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVADASLSYAHKL-FDQIPQPDLFI 81
L+ C +I ++Q+H L L+ A K + L + +L FDQIP+PD ++
Sbjct: 50 LLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYL 109
Query: 82 YNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSH 141
+ M++ + L+ S + + ++ LL + G + F AC + G+++
Sbjct: 110 WKVMLRCYCLNKESV-EVVKLYDLLMKH-GFRYDDIVFSKALKACTELQDLDNGKKIHCQ 167
Query: 142 AVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQA 201
VKV NV V+ L+ MY K G ++ KVF
Sbjct: 168 LVKVPSFDNV-VLTGLLDMYAKCGEIKSAHKVF--------------------------- 199
Query: 202 KELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNL 261
+++ ++VV W+++IAGYV+ E L F+RM + NEYT+ + + AC+ L
Sbjct: 200 ----NDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKL 255
Query: 262 VALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAM 321
AL QGKW H + + I+++ L+ S++DMY KCG+I +A RVF EH+ V W AM
Sbjct: 256 SALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVM-WTAM 314
Query: 322 IGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGK 370
I G+ +G +EA+ +FQKMK + PN VT ++L+ C +E G+
Sbjct: 315 IVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGR 363
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 121/249 (48%), Gaps = 12/249 (4%)
Query: 181 DLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRML 240
D+ +++ Y G A+ +FD++ E D W ++ Y +E + + ++
Sbjct: 75 DISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLM 134
Query: 241 QVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIE 300
+ G + ++ F AL AC+ L LD GK IH + + + +L ++DMYAKCGEI+
Sbjct: 135 KHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAKCGEIK 193
Query: 301 SASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNAC 360
SA +VF + R V W +MI G+ + E + +F +M+ NV N+ T+ L+ AC
Sbjct: 194 SAHKVFNDITL-RNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMAC 252
Query: 361 SHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMV----DLLSRAGLLKEAEDMISSMPMAP 416
+ + +GK + +V IE C+V D+ + G + A + +
Sbjct: 253 TKLSALHQGKWFHGCLVK-----SGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHV- 306
Query: 417 DVAIWGAVL 425
D+ +W A++
Sbjct: 307 DLVMWTAMI 315
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 157/350 (44%), Gaps = 43/350 (12%)
Query: 16 HCCRLASLVDTCKSIQQI---KQTHAQLVTTALISHHVSANKFLKLVADASLSYAHK-LF 71
+C +AS++ C I+ + + H + + +V AN + + A + K +F
Sbjct: 342 NCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNV-ANALVHMYAKCYQNRDAKYVF 400
Query: 72 DQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLS 131
+ + D+ +N++I S S +++L +F + +S ++PN + F AC + S
Sbjct: 401 EMESEKDIVAWNSIISGFS-QNGSIHEALFLFHRMNSES-VTPNGVTVASLFSACASLGS 458
Query: 132 VQEGEQVRSHAVKVGL--DSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMI 189
+ G + +++VK+G S+V V AL+ Y K G + R +F+ +K+ +W+ MI
Sbjct: 459 LAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMI 518
Query: 190 AAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEY 249
Y G+ + ELF+E ML+ KPNE
Sbjct: 519 GGYGKQGDTIGSLELFEE-------------------------------MLKKQQKPNES 547
Query: 250 TFVSALAACSNLVALDQG-KWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWE 308
TF S L+AC + +++G K+ S + + ++DM A+ GE+E A + +
Sbjct: 548 TFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEK 607
Query: 309 HNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLN 358
+ V + A + G MH + V +KM ++ P+ ++ L++
Sbjct: 608 MPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKML--DLHPDDASYYVLVS 655
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 229 bits (583), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 131/399 (32%), Positives = 224/399 (56%), Gaps = 14/399 (3%)
Query: 26 TCKSIQQIKQTHAQLVTTALISHHVSANKFL--KLVADAS----LSYAHKLFDQIPQPDL 79
TC + Q+KQ H T +I H+++ ++ L +L++ +S YA +F+Q+ P
Sbjct: 29 TCSNFSQLKQIH-----TKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPST 83
Query: 80 FIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVR 139
F +N MI++ S++ ++L++F L+ ++++F F AC S++ G QV
Sbjct: 84 FTWNLMIRSLSVNHKP-REALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVH 142
Query: 140 SHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMS 199
A+K G ++VF N L+ +Y K G + GRKVF+ + + SW TM+ V + +
Sbjct: 143 GLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLD 202
Query: 200 QAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACS 259
A+ +F++M ++VVSW+ +I YV+ EA F RM KPNE+T V+ L A +
Sbjct: 203 SAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQAST 262
Query: 260 NLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWN 319
L +L G+W+H + + ++ L ++IDMY+KCG ++ A +VF K + WN
Sbjct: 263 QLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGK-SLATWN 321
Query: 320 AMIGGFAMHGKPSEAIKVF-QKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVS 378
+MI +HG EA+ +F + + +V P+ +TFV +L+AC++ V++G YF M+
Sbjct: 322 SMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQ 381
Query: 379 DYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPD 417
YGI P EH CM+ LL +A +++A +++ SM PD
Sbjct: 382 VYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPD 420
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 228 bits (581), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 157/516 (30%), Positives = 247/516 (47%), Gaps = 50/516 (9%)
Query: 17 CCRLASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVADASLSY-AHKLFDQIP 75
CC + L + KS+ HA+L + S + L L + A+ +F +
Sbjct: 382 CCSVLGLYNYGKSV------HAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSME 435
Query: 76 QPDLFIYNTMIKAHSLSPSSCNDSLMVF-RLLTRDSGLSPNRYSFVFTFGACGNGLSVQE 134
+ D+ + ++I ++L VF + D L P+ AC +++
Sbjct: 436 EKDMVAWGSLISGLC-KNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRF 494
Query: 135 GEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVG 194
G QV +K GL NVFV ++LI +Y K GL E KVF
Sbjct: 495 GLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFT------------------- 535
Query: 195 SGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSA 254
M +++V+W+++I+ Y + ++D F+ ML G P+ + S
Sbjct: 536 ------------SMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSV 583
Query: 255 LAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRK 314
L A S+ +L +GK +H + R I + L ++IDMY KCG + A +F + K
Sbjct: 584 LVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSL 643
Query: 315 VWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFR 374
+ WN MI G+ HG A+ +F +MK SP+ VTF++L++AC+H VEEGK F
Sbjct: 644 I-TWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFE 702
Query: 375 LMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDM 434
M DYGI P +EHY MVDLL RAGLL+EA I +MP+ D +IW +L+A R + ++
Sbjct: 703 FMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNV 762
Query: 435 ERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDAR----MLREKSEISTATKKIPGC 490
E G + M+P +V L N+Y +G N+A +++EK K PGC
Sbjct: 763 ELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEK-----GLHKQPGC 817
Query: 491 SSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKL 526
S IE++ F G S P E+++ L+ + + +
Sbjct: 818 SWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRLKSNM 853
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 182/400 (45%), Gaps = 40/400 (10%)
Query: 31 QQIKQTHAQLVTTALISHHVSANKFLKLVADASLSY-AHKLFDQIP-QPDLFIYNTMIKA 88
++ KQ H ++ +L + + + LS A ++F +I + ++ ++N MI
Sbjct: 187 EEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVG 246
Query: 89 HSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLD 148
S C SL ++ +L +++ + SF GAC + G Q+ VK+GL
Sbjct: 247 FGGS-GICESSLDLY-MLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLH 304
Query: 149 SNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEM 208
++ +V +L+ MY K G+V VF VDK L WN M+AAY
Sbjct: 305 NDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYA--------------- 349
Query: 209 QEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGK 268
E D GY ALD F M Q P+ +T + ++ CS L + GK
Sbjct: 350 -ENDY--------GY-------SALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGK 393
Query: 269 WIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMH 328
+H+ + + I+ + ++++ +Y+KCG A VF K V W ++I G +
Sbjct: 394 SVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMV-AWGSLISGLCKN 452
Query: 329 GKPSEAIKVFQKMKVENVS--PNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEI 386
GK EA+KVF MK ++ S P+ ++ NAC+ + G M+ G++ +
Sbjct: 453 GKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKT-GLVLNV 511
Query: 387 EHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLN 426
++DL S+ GL + A + +SM VA W ++++
Sbjct: 512 FVGSSLIDLYSKCGLPEMALKVFTSMSTENMVA-WNSMIS 550
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 161/365 (44%), Gaps = 48/365 (13%)
Query: 91 LSPSSCN----------DSLMVFRLLTRDSGLSPNRYSFVFTF----GACGNGLSVQEGE 136
+SP+S N + L L ++ G SP ++ VFTF AC ++ G+
Sbjct: 22 ISPASINSGIRALIQKGEYLQALHLYSKHDGSSP-FWTSVFTFPSLLKACSALTNLSYGK 80
Query: 137 QVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSG 196
+ V +G + F+ +L+ MY K G ++Y +VF+ W
Sbjct: 81 TIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFD--------GW----------- 121
Query: 197 NMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTF---VS 253
SQ++ + +DV W+++I GY + F E + F RML G +P+ ++ VS
Sbjct: 122 --SQSQS---GVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVS 176
Query: 254 ALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKR 313
+ N ++GK IH F+ R + + L ++IDMY K G A RVF E K
Sbjct: 177 VMCKEGNF-RREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKS 235
Query: 314 KVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYF 373
V WN MI GF G ++ ++ K +V +F L ACS G+
Sbjct: 236 NVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGR-QI 294
Query: 374 RLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKD 433
V G+ + ++ + S+ G++ EAE + S + + + IW A++ A Y +
Sbjct: 295 HCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCV-VDKRLEIWNAMVAA---YAE 350
Query: 434 MERGY 438
+ GY
Sbjct: 351 NDYGY 355
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 111/479 (23%), Positives = 190/479 (39%), Gaps = 94/479 (19%)
Query: 22 SLVDTCKSIQQI---KQTHAQLVTTALISHHVSANKFLKL-VADASLSYAHKLFDQIPQP 77
SL+ C ++ + K H +V A + + V L YA ++FD Q
Sbjct: 65 SLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQS 124
Query: 78 -------DLFIYNTMIKAHSL-----SPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGA 125
D+ ++N+MI + C ++VF G+ P+ +S
Sbjct: 125 QSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVF-------GVRPDAFSLSIVVSV 177
Query: 126 -CGNG-LSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDK-DL 182
C G +EG+Q+ ++ LD++ F+ ALI MY K+GL +VF DK ++
Sbjct: 178 MCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNV 237
Query: 183 YSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQV 242
WN MI + GSG + +L+ + V ST
Sbjct: 238 VLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVST------------------------ 273
Query: 243 GPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESA 302
+F AL ACS G+ IH + + + + + S++ MY+KCG + A
Sbjct: 274 -------SFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEA 326
Query: 303 SRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSH 362
VF +++ WNAM+ +A + A+ +F M+ ++V P+ T +++ CS
Sbjct: 327 ETVF-SCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSV 385
Query: 363 GYMVEEGK-----LYFRLMVSD--------------------YGIIPEIEH-----YGCM 392
+ GK L+ R + S Y + +E +G +
Sbjct: 386 LGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSL 445
Query: 393 VDLLSRAGLLKEAEDMISSM-----PMAPDVAIWGAVLNACRIYKDMERGYRI-GRIIK 445
+ L + G KEA + M + PD I +V NAC + + G ++ G +IK
Sbjct: 446 ISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIK 504
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 140/477 (29%), Positives = 239/477 (50%), Gaps = 39/477 (8%)
Query: 18 CRLASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIPQ 76
C L S++D C ++ KQ H + + L+ + L + SL ++KLF IP
Sbjct: 457 CSLLSVLD-CLNLG--KQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPF 513
Query: 77 PDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGE 136
D + +MI + +++ +F + D G SP+ + C + S+ G+
Sbjct: 514 KDNACWASMISGFN-EYGYLREAIGLFSEML-DDGTSPDESTLAAVLTVCSSHPSLPRGK 571
Query: 137 QVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSG 196
++ + ++ G+D + + +AL+ MY K G
Sbjct: 572 EIHGYTLRAGIDKGMDLGSALVNMYSK-------------------------------CG 600
Query: 197 NMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALA 256
++ A++++D + E D VS S++I+GY Q G + F M+ G + + S L
Sbjct: 601 SLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILK 660
Query: 257 ACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVW 316
A + G +H++I + + + +S++ MY+K G I+ + F + N +
Sbjct: 661 AAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLI- 719
Query: 317 PWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLM 376
W A+I +A HGK +EA++V+ MK + P+KVTFV +L+ACSHG +VEE + M
Sbjct: 720 AWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSM 779
Query: 377 VSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMER 436
V DYGI PE HY CMVD L R+G L+EAE I++M + PD +WG +L AC+I+ ++E
Sbjct: 780 VKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVEL 839
Query: 437 GYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSI 493
G + E++P+ G ++ L NI + G W++ R+ + T +K PG SS+
Sbjct: 840 GKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMK-GTGVQKEPGWSSV 895
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/499 (21%), Positives = 210/499 (42%), Gaps = 83/499 (16%)
Query: 21 ASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVADASL----------SYAHKL 70
S++ C ++Q A L + + H + F V +++L A+K+
Sbjct: 154 GSVISACSALQ------APLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKV 207
Query: 71 FDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGL 130
F +++ +NT+I A +L + +F + P+ Y++ AC +
Sbjct: 208 FRDSLSANVYCWNTII-AGALRNQNYGAVFDLFHEMCVGFQ-KPDSYTYSSVLAACASLE 265
Query: 131 SVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIA 190
++ G+ V++ +K G + +VFV A++ +Y K
Sbjct: 266 KLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAK--------------------------- 297
Query: 191 AYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYT 250
G+M++A E+F + VVSW+ +++GY + AL+ F M G + N T
Sbjct: 298 ----CGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCT 353
Query: 251 FVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHN 310
S ++AC + + +H+++ + ++ + A++I MY+K G+I+ + +VF + +
Sbjct: 354 VTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLD 413
Query: 311 AKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACS--------H 362
++ N MI F+ KP +AI++F +M E + ++ + +LL+ H
Sbjct: 414 DIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVH 473
Query: 363 GYMVEEGKLYFRLMVSD-----YGIIPEIEH---------------YGCMVDLLSRAGLL 402
GY ++ G L L V Y +E + M+ + G L
Sbjct: 474 GYTLKSG-LVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYL 532
Query: 403 KEAEDMISSM---PMAPDVAIWGAVLNACRIYKDMERGYRI-GRIIKEMDPNHVGCHVLL 458
+EA + S M +PD + AVL C + + RG I G ++ + L
Sbjct: 533 REAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSAL 592
Query: 459 GNIYSSSGRWNDARMLREK 477
N+YS G AR + ++
Sbjct: 593 VNMYSKCGSLKLARQVYDR 611
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 149/318 (46%), Gaps = 37/318 (11%)
Query: 174 FEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEAL 233
F+ + K L SW Y SG+M+ A +LFD + + DVVS + +I+GY Q F E+L
Sbjct: 82 FDVFLTKSLLSW------YSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESL 135
Query: 234 DFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMN----ERLLASI 289
FF +M +G + NE ++ S ++ACS L Q + IKM E + +++
Sbjct: 136 RFFSKMHFLGFEANEISYGSVISACSAL----QAPLFSELVCCHTIKMGYFFYEVVESAL 191
Query: 290 IDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPN 349
ID+++K E A +VF + + V+ WN +I G + +F +M V P+
Sbjct: 192 IDVFSKNLRFEDAYKVFRD-SLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPD 250
Query: 350 KVTFVALLNACSHGYMVEEGKL----YFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEA 405
T+ ++L AC+ + GK+ + D + I VDL ++ G + EA
Sbjct: 251 SYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDVFVCTAI------VDLYAKCGHMAEA 304
Query: 406 EDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHV---LLGNIY 462
++ S +P P V W +L+ Y + I KEM H G + + ++
Sbjct: 305 MEVFSRIP-NPSVVSWTVMLSG---YTKSNDAFSALEIFKEM--RHSGVEINNCTVTSVI 358
Query: 463 SSSGRWNDARMLREKSEI 480
S+ GR M+ E S++
Sbjct: 359 SACGR---PSMVCEASQV 373
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 157/324 (48%), Gaps = 16/324 (4%)
Query: 131 SVQEGEQVR--SHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDK----DLYS 184
S + G+ +R + ++ GL ++ F V +L+ + L G++V + + DL
Sbjct: 431 SKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNL---GKQVHGYTLKSGLVLDLTV 487
Query: 185 WNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGP 244
+++ Y G++ ++ +LF + +D W+++I+G+ + G EA+ F ML G
Sbjct: 488 GSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGT 547
Query: 245 KPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASR 304
P+E T + L CS+ +L +GK IH + R I L +++++MY+KCG ++ A +
Sbjct: 548 SPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQ 607
Query: 305 VFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGY 364
V ++ + +++I G++ HG + +F+ M + + + ++L A +
Sbjct: 608 V-YDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAA--- 663
Query: 365 MVEEGKLYFRL--MVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWG 422
+ +E L ++ ++ G+ E ++ + S+ G + + S + PD+ W
Sbjct: 664 LSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQIN-GPDLIAWT 722
Query: 423 AVLNACRIYKDMERGYRIGRIIKE 446
A++ + + ++ ++KE
Sbjct: 723 ALIASYAQHGKANEALQVYNLMKE 746
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 226 bits (577), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 139/439 (31%), Positives = 245/439 (55%), Gaps = 24/439 (5%)
Query: 67 AHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGAC 126
A K+FD++P+ ++ +N MI + S D+++ L S + N +++
Sbjct: 100 ARKVFDEMPERNVATWNAMIGGYM----SNGDAVLASGLFEEIS-VCRNTVTWIEMIKGY 154
Query: 127 GNGLSVQEGEQVRSHAVKVGLD-SNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSW 185
G + + E+ R ++ + NV + ++G+Y +E RK FE +K+ + W
Sbjct: 155 GKRIEI---EKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVW 211
Query: 186 NTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPK 245
+ M++ Y G++ +A+ +F + +D+V W+T+IAGY Q G +A+D F M G +
Sbjct: 212 SLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYE 271
Query: 246 PNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRV 305
P+ T S L+AC+ LD G+ +HS I I++N+ + ++IDMYAKCG++E+A+ V
Sbjct: 272 PDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSV 331
Query: 306 FWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYM 365
F E + R V N+MI A+HGK EA+++F M+ ++ P+++TF+A+L AC HG
Sbjct: 332 F-ESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGF 390
Query: 366 VEEG-KLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAV 424
+ EG K++ + D + P ++H+GC++ LL R+G LKEA ++ M + P+ + GA+
Sbjct: 391 LMEGLKIFSEMKTQD--VKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGAL 448
Query: 425 LNACRIYKDMERGYRIGRIIK-------EMDPNHVGCHVLLGNIYSSSGRWNDARMLREK 477
L AC+++ D E ++ +II+ NH+ + N+Y+ + RW A LR +
Sbjct: 449 LGACKVHMDTEMAEQVMKIIETAGSITNSYSENHLAS---ISNLYAHTERWQTAEALRVE 505
Query: 478 SEISTATKKIPGCSSIELN 496
E +K PG SS+ L
Sbjct: 506 ME-KRGLEKSPGLSSLVLT 523
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 119/442 (26%), Positives = 201/442 (45%), Gaps = 63/442 (14%)
Query: 80 FIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVR 139
F + +IK H +S S +L+++ + R P + AC V G+ +
Sbjct: 12 FHVSNLIKNH-ISRGSPIQALVLYGGIRRRGVYFPGWVPLILRACACVVPRVVL-GKLLH 69
Query: 140 SHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMS 199
S ++K G+ S+V V ++LI MYGK G V RKVF+ ++++ +WN MI Y+ +G+
Sbjct: 70 SESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAV 129
Query: 200 QAKELFDEMQE-QDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAA- 257
A LF+E+ ++ V+W +I GY + +A + F RM P E V A +
Sbjct: 130 LASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERM------PFELKNVKAWSVM 183
Query: 258 ----CSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKR 313
+N D K+ + N + + ++ Y + G++ A +F+ A R
Sbjct: 184 LGVYVNNRKMEDARKFFEDIPEK-----NAFVWSLMMSGYFRIGDVHEARAIFYRVFA-R 237
Query: 314 KVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYF 373
+ WN +I G+A +G +AI F M+ E P+ VT ++L+AC+ ++ G+
Sbjct: 238 DLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVH 297
Query: 374 RL---------------MVSDYGIIPEIEH------------YGC---MVDLLSRAGLLK 403
L ++ Y ++E+ C M+ L+ G K
Sbjct: 298 SLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGK 357
Query: 404 EAEDMISSMP---MAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMD--PN--HVGCHV 456
EA +M S+M + PD + AVL AC + G +I +K D PN H GC +
Sbjct: 358 EALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLI 417
Query: 457 -LLGNIYSSSGRWNDA-RMLRE 476
LLG SG+ +A R+++E
Sbjct: 418 HLLGR----SGKLKEAYRLVKE 435
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 118/310 (38%), Gaps = 60/310 (19%)
Query: 59 VADASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRD--------- 109
V + + A K F+ IP+ + F+++ M+ + + +R+ RD
Sbjct: 188 VNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIA 247
Query: 110 --------------------SGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDS 149
G P+ + AC + G +V S G++
Sbjct: 248 GYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIEL 307
Query: 150 NVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQ 209
N FV NALI MY K G +E VFE + + N+MI+ G +A E+F M+
Sbjct: 308 NQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTME 367
Query: 210 EQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKW 269
D+ KP+E TF++ L AC + L +G
Sbjct: 368 SLDL-------------------------------KPDEITFIAVLTACVHGGFLMEGLK 396
Query: 270 IHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHG 329
I S + ++K N + +I + + G+++ A R+ E + K A++G +H
Sbjct: 397 IFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHM 456
Query: 330 KPSEAIKVFQ 339
A +V +
Sbjct: 457 DTEMAEQVMK 466
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 226 bits (577), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 160/568 (28%), Positives = 265/568 (46%), Gaps = 52/568 (9%)
Query: 67 AHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGAC 126
A ++F + + + YN ++ + + +L R G+ +S AC
Sbjct: 370 AVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQR--GVELTDFSLTSAVDAC 427
Query: 127 GNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWN 186
G + EQ+ +K G N + AL+ M +
Sbjct: 428 GLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTR----------------------- 464
Query: 187 TMIAAYVGSGNMSQAKELFDEMQEQDVVSWST--IIAGYVQVGCFMEALDFFHRML-QVG 243
M+ A+E+FD+ S +T II GY + G +A+ FHR L +
Sbjct: 465 --------CERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQK 516
Query: 244 PKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESAS 303
+E + LA C L + G IH + + + L S+I MYAKC + + A
Sbjct: 517 LFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAI 576
Query: 304 RVFWEHNAKRK--VWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACS 361
++F N R+ V WN++I + + EA+ ++ +M + + P+ +T +++A
Sbjct: 577 KIF---NTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFR 633
Query: 362 HGYMVEEGKL-----YFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAP 416
+ E KL F M + Y I P EHY V +L GLL+EAED I+SMP+ P
Sbjct: 634 Y---TESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQP 690
Query: 417 DVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLRE 476
+V++ A+L++CRI+ + R+ ++I P ++L NIYS+SG W+ + M+RE
Sbjct: 691 EVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSEMIRE 750
Query: 477 KSEISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVFG 536
+ +K P S I + F D SHPQ +++Y L+ + + GY P
Sbjct: 751 EMR-ERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKDIYRGLEILIMECLKVGYEPN-T 808
Query: 537 XXXXXXXXXXXXXTALSVHSEKLAIAFGLLNT-APGTPIRIVKNLRVCRDCHQVTKFISK 595
+ L HS KLA+ +G+L++ G P+R++KN+ +C DCH+ K+IS
Sbjct: 809 EYVLQEVDEFMKKSFLFHHSAKLAVTYGILSSNTRGKPVRVMKNVMLCGDCHEFFKYISV 868
Query: 596 VYDRVIIVRDRTRYHHFKDGICSCKDYW 623
V R I++RD + +HHF +G CSC+D W
Sbjct: 869 VVKREIVLRDSSGFHHFVNGKCSCRDLW 896
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 171/354 (48%), Gaps = 28/354 (7%)
Query: 35 QTHAQLVTTALISHHVSANKFLKLV---ADASLSYAHKLFDQIPQPDLFIYNTMIKAHSL 91
Q H +V + ++ +N + L + +S KLFD+IPQ D+ +NT++ + +
Sbjct: 202 QIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSS-LV 260
Query: 92 SPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNV 151
+ + +F + R G + ++ +C + + G ++ A+++GL +
Sbjct: 261 KEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQEL 320
Query: 152 FVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQ 211
V NALIG Y K+ ++ ++E + +D ++ MI AY+ G + A E+F + E+
Sbjct: 321 SVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEK 380
Query: 212 DVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIH 271
+ ++++ ++AG+ + G ++AL F MLQ G + +++ SA+ AC + + IH
Sbjct: 381 NTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIH 440
Query: 272 SFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWN--------AMIG 323
F + N + +++DM +C + A +F + WP N ++IG
Sbjct: 441 GFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQ-------WPSNLDSSKATTSIIG 493
Query: 324 GFAMHGKPSEAIKVFQKMKVEN-VSPNKVTFVALLNACSHGYMVEEGKLYFRLM 376
G+A +G P +A+ +F + E + ++V+ +L C G L FR M
Sbjct: 494 GYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVC--------GTLGFREM 539
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 120/250 (48%), Gaps = 15/250 (6%)
Query: 186 NTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVG-P 244
N +I+ Y+ G +A +F + VVS++ +I+G+ ++ +EAL F RM + G
Sbjct: 118 NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLV 177
Query: 245 KPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAK-----CGEI 299
+PNEYTFV+ L AC + G IH I + + + S++ +Y K C ++
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDV 237
Query: 300 ESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKM-KVENVSPNKVTFVALLN 358
++ +R V WN ++ GK +A +F +M +VE + T LL+
Sbjct: 238 LK----LFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLS 293
Query: 359 ACSHGYMVEEGK-LYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPD 417
+C+ ++ G+ L+ R + G++ E+ ++ S+ +K+ E + M MA D
Sbjct: 294 SCTDSSVLLRGRELHGRAI--RIGLMQELSVNNALIGFYSKFWDMKKVESLYEMM-MAQD 350
Query: 418 VAIWGAVLNA 427
+ ++ A
Sbjct: 351 AVTFTEMITA 360
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 153/370 (41%), Gaps = 44/370 (11%)
Query: 70 LFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGL-SPNRYSFVFTFGACGN 128
+F + P + Y +I S + FR+ R +GL PN Y+FV AC
Sbjct: 136 VFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRM--RKAGLVQPNEYTFVAILTACVR 193
Query: 129 GLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGK--WGLVEYGRKVFEWAVDKDLYSWN 186
G Q+ VK G ++VFV N+L+ +Y K + K+F+ +D+ SWN
Sbjct: 194 VSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWN 253
Query: 187 TMIAAYVGSGNMSQAKELFDEMQE-----QDVVSWSTIIAGYVQVGCFMEALDFFHRMLQ 241
T++++ V G +A +LF EM D + ST+++ + + R ++
Sbjct: 254 TVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIR 313
Query: 242 VGPKPNEYTFVSALAACSNLVALDQGKW-IHSFIGRGEIKMNER--LLASIIDMYAKCGE 298
+G + L+ + L+ W + E+ M + +I Y G
Sbjct: 314 IG-------LMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGM 366
Query: 299 IESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLN 358
++SA +F K + +NA++ GF +G +A+K+F M V + + ++
Sbjct: 367 VDSAVEIFANVTEKNTI-TYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVD 425
Query: 359 ACS-----------HGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAED 407
AC HG+ ++ G + P I+ ++D+ +R + +AE+
Sbjct: 426 ACGLVSEKKVSEQIHGFCIKFGTAFN----------PCIQ--TALLDMCTRCERMADAEE 473
Query: 408 MISSMPMAPD 417
M P D
Sbjct: 474 MFDQWPSNLD 483
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 225 bits (573), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 142/435 (32%), Positives = 226/435 (51%), Gaps = 42/435 (9%)
Query: 64 LSYAHKLFDQIPQP-DLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFT 122
+S A K+FD++PQ D ++T++ + L S +L +FR++ R S + N + +
Sbjct: 176 ISDARKVFDEMPQSVDAVTFSTLMNGY-LQVSKKALALDLFRIM-RKSEVVVNVSTLLSF 233
Query: 123 FGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDL 182
A + + E +K+GLD ++ ++ ALIGMYGK
Sbjct: 234 LSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGK------------------- 274
Query: 183 YSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQV 242
+G +S A+ +FD +DVV+W+ +I Y + G E + +M
Sbjct: 275 ------------TGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYE 322
Query: 243 GPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESA 302
KPN TFV L++C+ A G+ + + I ++ L +++DMYAK G +E A
Sbjct: 323 KMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKA 382
Query: 303 SRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVEN--VSPNKVTFVALLNAC 360
+F K V W AMI G+ HG EA+ +F KM+ EN V PN++TF+ +LNAC
Sbjct: 383 VEIFNRMKDK-DVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNAC 441
Query: 361 SHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAI 420
SHG +V EG F+ MV Y P++EHYGC+VDLL RAG L+EA ++I ++P+ D
Sbjct: 442 SHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTA 501
Query: 421 WGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEI 480
W A+L ACR+Y + + G + + EM H +LL ++ +G N + L +E+
Sbjct: 502 WRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAG--NPEKSL--DNEL 557
Query: 481 STATKKIPGCSSIEL 495
+ K+ G S+IE+
Sbjct: 558 NKGRKE-AGYSAIEI 571
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 118/415 (28%), Positives = 202/415 (48%), Gaps = 37/415 (8%)
Query: 14 SDHCCRLASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVADASLSYAHKLFDQ 73
S C +L + + +C+ ++ + H +V T L + +K L + + YA +F+
Sbjct: 25 SPQCQKLINDLRSCRDTVEVSRIHGYMVKTGLDKDDFAVSKLLAFSSVLDIRYASSIFEH 84
Query: 74 IPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQ 133
+ +LF++NTMI+ +S+S + VF L R GL+ +R+SF+ T +C L V
Sbjct: 85 VSNTNLFMFNTMIRGYSISDEP-ERAFSVFNQL-RAKGLTLDRFSFITTLKSCSRELCVS 142
Query: 134 EGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYV 193
GE + A++ G + V DL N +I Y
Sbjct: 143 IGEGLHGIALRSG-----------------------------FMVFTDLR--NALIHFYC 171
Query: 194 GSGNMSQAKELFDEM-QEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFV 252
G +S A+++FDEM Q D V++ST++ GY+QV ALD F M + N T +
Sbjct: 172 VCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLL 231
Query: 253 SALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAK 312
S L+A S+L L + H + + ++ L+ ++I MY K G I SA R+F + +
Sbjct: 232 SFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIF-DCAIR 290
Query: 313 RKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLY 372
+ V WN MI +A G E + + ++MK E + PN TFV LL++C++ G+
Sbjct: 291 KDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTV 350
Query: 373 FRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNA 427
L+ + + I +VD+ ++ GLL++A ++ + M DV W A+++
Sbjct: 351 ADLLEEERIALDAILGTA-LVDMYAKVGLLEKAVEIFNRMK-DKDVKSWTAMISG 403
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 222 bits (565), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 127/343 (37%), Positives = 196/343 (57%), Gaps = 16/343 (4%)
Query: 162 GKWGLVEYGRKVFEWAVDK----DLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWS 217
++G + GR V +AV DL NT+I+ Y G++ A F E+ +DV+S++
Sbjct: 319 ARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYN 378
Query: 218 TIIAGYVQVGCF-MEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGR 276
++I G V V C E+ FH M G +P+ T + L ACS+L AL G H +
Sbjct: 379 SLITGCV-VNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVV 437
Query: 277 GEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIK 336
+N + +++DMY KCG+++ A RVF + KR + WN M+ GF +HG EA+
Sbjct: 438 HGYAVNTSICNALMDMYTKCGKLDVAKRVF-DTMHKRDIVSWNTMLFGFGIHGLGKEALS 496
Query: 337 VFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMV-SDYGIIPEIEHYGCMVDL 395
+F M+ V+P++VT +A+L+ACSH +V+EGK F M D+ +IP I+HY CM DL
Sbjct: 497 LFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDL 556
Query: 396 LSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCH 455
L+RAG L EA D ++ MP PD+ + G +L+AC YK+ E G + + ++ +
Sbjct: 557 LARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLGETTESL- 615
Query: 456 VLLGNIYSSSGRWNDA---RMLREKSEISTATKKIPGCSSIEL 495
VLL N YS++ RW DA RM+++K + K PG S +++
Sbjct: 616 VLLSNTYSAAERWEDAARIRMIQKKRGL----LKTPGYSWVDV 654
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 171/366 (46%), Gaps = 37/366 (10%)
Query: 62 ASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVF 121
L A K+FD++P+ D+ +N MI SL D + +F + R GLSPN + V
Sbjct: 152 GELEMAIKVFDEMPKRDMVAWNAMISGFSLH-CCLTDVIGLFLDMRRIDGLSPNLSTIVG 210
Query: 122 TFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKD 181
F A G +++EG+ V + ++G +++ V ++ +Y K + Y R+VF+ K+
Sbjct: 211 MFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKN 270
Query: 182 LYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIA-GYVQVGCFMEALDFFHRML 240
+W+ MI YV + + +A E+F +M D V+ T +A G + +G
Sbjct: 271 EVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMG------------- 317
Query: 241 QVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIE 300
C+ L G+ +H + + ++ + +II YAK G +
Sbjct: 318 -----------------CARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLC 360
Query: 301 SASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNAC 360
A R F E K V +N++I G ++ +P E+ ++F +M+ + P+ T + +L AC
Sbjct: 361 DAFRQFSEIGLK-DVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTAC 419
Query: 361 SHGYMVEEG-KLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVA 419
SH + G + +V Y + I + ++D+ ++ G L A+ + +M D+
Sbjct: 420 SHLAALGHGSSCHGYCVVHGYAVNTSICN--ALMDMYTKCGKLDVAKRVFDTMH-KRDIV 476
Query: 420 IWGAVL 425
W +L
Sbjct: 477 SWNTML 482
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 100/182 (54%), Gaps = 4/182 (2%)
Query: 192 YVGSGNMSQAKELFDEMQEQDV--VSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEY 249
Y + A+ +FDE+ + ++W +I Y +ALD +++ML G +P +Y
Sbjct: 45 YASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKY 104
Query: 250 TFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEH 309
T+ L AC+ L A+D GK IHS + + + + +++D YAKCGE+E A +VF E
Sbjct: 105 TYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEM 164
Query: 310 NAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKM-KVENVSPNKVTFVALLNACSHGYMVEE 368
KR + WNAMI GF++H ++ I +F M +++ +SPN T V + A + E
Sbjct: 165 -PKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALRE 223
Query: 369 GK 370
GK
Sbjct: 224 GK 225
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/440 (23%), Positives = 190/440 (43%), Gaps = 68/440 (15%)
Query: 22 SLVDTCKS-----IQQIKQTHAQLVTTALISHHVSANKFLKLVADASLSYAHKLFDQIPQ 76
SL++TC + Q+ H + L S V N + + A +FD+IP
Sbjct: 4 SLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPH 63
Query: 77 PDL--FIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQE 134
P + ++ MI+A++ + + + +++L +SG+ P +Y++ F AC ++ +
Sbjct: 64 PRINPIAWDLMIRAYASNDFAEKALDLYYKML--NSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 135 GEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVG 194
G+ + SH ++++V AL+ Y K
Sbjct: 122 GKLIHSHVNCSDFATDMYVCTALVDFYAK------------------------------- 150
Query: 195 SGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQV-GPKPNEYTFVS 253
G + A ++FDEM ++D+V+W+ +I+G+ C + + F M ++ G PN T V
Sbjct: 151 CGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVG 210
Query: 254 ALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKR 313
A AL +GK +H + R + + I+D+YAK I A RVF + + K+
Sbjct: 211 MFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVF-DLDFKK 269
Query: 314 KVWPWNAMIGGFAMHGKPSEAIKVFQKMKVEN----VSPNKVTFVALLNA---------C 360
W+AMIGG+ + EA +VF +M V + V+P + + + A C
Sbjct: 270 NEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRC 329
Query: 361 SHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAI 420
H Y V+ G I ++ ++ ++ G L +A S + + DV
Sbjct: 330 VHCYAVKA------------GFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGL-KDVIS 376
Query: 421 WGAVLNACRIYKDMERGYRI 440
+ +++ C + E +R+
Sbjct: 377 YNSLITGCVVNCRPEESFRL 396
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 116/269 (43%), Gaps = 36/269 (13%)
Query: 37 HAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSS 95
H V I N + A SL A + F +I D+ YN++I ++
Sbjct: 331 HCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRP 390
Query: 96 CNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVN 155
+S +F + R SG+ P+ + + AC + ++ G + V G N + N
Sbjct: 391 -EESFRLFHEM-RTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICN 448
Query: 156 ALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVS 215
AL+ MY K G ++ ++VF+ +D+ SWNTM+ + G +A LF+ MQE
Sbjct: 449 ALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQE----- 503
Query: 216 WSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIG 275
G P+E T ++ L+ACS+ +D+GK + + +
Sbjct: 504 --------------------------TGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMS 537
Query: 276 RGEIKMNERL--LASIIDMYAKCGEIESA 302
RG+ + R+ + D+ A+ G ++ A
Sbjct: 538 RGDFNVIPRIDHYNCMTDLLARAGYLDEA 566
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 10/182 (5%)
Query: 251 FVSALAACSNLVALDQGKWIHSFIGRGEIKMNER-LLASIIDMYAKCGEIESASRVFWEH 309
F+S L C L G+ IH + + + ++ +L ++ +YA C E+E A VF E
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 310 NAKR-KVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEE 368
R W+ MI +A + +A+ ++ KM V P K T+ +L AC+ +++
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 369 GKL-YFRLMVSDYGIIPEIEHYGC--MVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVL 425
GKL + + SD+ + Y C +VD ++ G L+ A + MP D+ W A++
Sbjct: 122 GKLIHSHVNCSDFA----TDMYVCTALVDFYAKCGELEMAIKVFDEMP-KRDMVAWNAMI 176
Query: 426 NA 427
+
Sbjct: 177 SG 178
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 221 bits (564), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 137/469 (29%), Positives = 244/469 (52%), Gaps = 7/469 (1%)
Query: 61 DASLSYAHKLFDQIPQ-PDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSF 119
+ + A +F + P+ D +NT+I ++ + + + + ++GL + +SF
Sbjct: 206 EGDIDKALSVFWRNPELNDTISWNTLIAGYA--QNGYEEEALKMAVSMEENGLKWDEHSF 263
Query: 120 VFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVD 179
+ S++ G++V + +K G SN FV + ++ +Y K G ++Y
Sbjct: 264 GAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGF 323
Query: 180 KDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRM 239
+LYS ++MI Y G M +AK LFD + E+++V W+ + GY+ + L+
Sbjct: 324 GNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAF 383
Query: 240 L-QVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGE 298
+ P+ VS L ACS ++ GK IH R I M+++L+ + +DMY+KCG
Sbjct: 384 IANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGN 443
Query: 299 IESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLN 358
+E A R+F + + +R +NAMI G A HG +++ + F+ M P+++TF+ALL+
Sbjct: 444 VEYAERIF-DSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLS 502
Query: 359 ACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSM-PMAPD 417
AC H +V EG+ YF+ M+ Y I PE HY CM+DL +A L +A +++ + + D
Sbjct: 503 ACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKD 562
Query: 418 VAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREK 477
I GA LNAC K+ E + + ++ ++ ++ + N Y+SSGRW++ + +R +
Sbjct: 563 AVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQ 622
Query: 478 SEISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKL 526
+ GCS ++ F+ F D SH ++ +Y+ L +T L
Sbjct: 623 MR-GKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAMLHFVTKDL 670
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 186/403 (46%), Gaps = 47/403 (11%)
Query: 67 AHKLFDQIP-QPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDS--GLSPNRYSFVFTF 123
A +LF+ + DL YNT++ + + ++++ +F + R + + ++
Sbjct: 73 ARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMV 132
Query: 124 GACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDK--D 181
+V GEQ+ VK G D F V++LI MY K G + +F + + D
Sbjct: 133 KLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVD 192
Query: 182 LYSWNTMIAAYVGSGNMSQAKELFDEMQE-QDVVSWSTIIAGYVQVGCFMEALDFFHRML 240
+ N MIAAY G++ +A +F E D +SW+T+IAGY Q G EAL M
Sbjct: 193 SVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSME 252
Query: 241 QVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEI- 299
+ G K +E++F + L S+L +L GK +H+ + + N+ + + I+D+Y KCG +
Sbjct: 253 ENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMK 312
Query: 300 --ESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENV----------- 346
ESA ++ N ++ ++MI G++ GK EA ++F + +N+
Sbjct: 313 YAESAHLLYGFGN----LYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYL 368
Query: 347 ---------------------SPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPE 385
+P+ + V++L ACS +E GK + GI+ +
Sbjct: 369 NLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRT-GILMD 427
Query: 386 IEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNAC 428
+ VD+ S+ G ++ AE + S D ++ A++ C
Sbjct: 428 KKLVTAFVDMYSKCGNVEYAERIFDS-SFERDTVMYNAMIAGC 469
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 160/340 (47%), Gaps = 48/340 (14%)
Query: 142 AVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQA 201
++K G N L+ +Y K GL+ R VF+ +++++YSWN +IAAYV N+ +A
Sbjct: 14 SIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEA 73
Query: 202 KELFDEMQ-EQDVVSWSTIIAGYVQV-GCFMEALDFF---HRMLQVGPKPNEYTFVSALA 256
+ELF+ E+D+++++T+++G+ + GC EA++ F HR + +++T + +
Sbjct: 74 RELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVK 133
Query: 257 ACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKC-------------------- 296
+ L + G+ +H + + + ++S+I MY+KC
Sbjct: 134 LSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDS 193
Query: 297 -------------GEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKV 343
G+I+ A VFW + WN +I G+A +G EA+K+ M+
Sbjct: 194 VARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEE 253
Query: 344 ENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLK 403
+ ++ +F A+LN S ++ GK ++ + + G +VD+ + G +K
Sbjct: 254 NGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSG-IVDVYCKCGNMK 312
Query: 404 EAE---------DMISSMPMAPDVAIWGAVLNACRIYKDM 434
AE ++ S+ M + G ++ A R++ +
Sbjct: 313 YAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSL 352
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 123/348 (35%), Positives = 192/348 (55%), Gaps = 4/348 (1%)
Query: 186 NTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPK 245
NT+I Y ++ A +F + +E + +W++II+GY Q+ EA ML G +
Sbjct: 319 NTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQ 378
Query: 246 PNEYTFVSALAACSNLVALDQGKWIHSFIGRGE-IKMNERLLASIIDMYAKCGEIESASR 304
PN T S L C+ + L GK H +I R + K L S++D+YAK G+I +A +
Sbjct: 379 PNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQ 438
Query: 305 VFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGY 364
V + +KR + ++I G+ G+ A+ +F++M + P+ VT VA+L+ACSH
Sbjct: 439 VS-DLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSK 497
Query: 365 MVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAV 424
+V EG+ F M +YGI P ++H+ CMVDL RAG L +A+D+I +MP P A W +
Sbjct: 498 LVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATL 557
Query: 425 LNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTAT 484
LNAC I+ + + G + EM P + G +VL+ N+Y+++G W+ +R
Sbjct: 558 LNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMR-DLGV 616
Query: 485 KKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKI-AGY 531
KK PGC+ I+ + F F VGD S P++ Y LD + +K AGY
Sbjct: 617 KKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGLNQLMKDNAGY 664
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/450 (24%), Positives = 204/450 (45%), Gaps = 30/450 (6%)
Query: 21 ASLVDTCKSIQQI---KQTHAQLVTTALISHHVSANKFLKLVADASL-SYAHKLFDQIPQ 76
ASL+ C ++ Q HA +++ + H V K + + +L + A + +
Sbjct: 47 ASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDI 106
Query: 77 PDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGE 136
+N +I +++ + R++++ G+ P+ +++ ACG L V G
Sbjct: 107 LHPLPWNVLIASYAKNELFEEVIAAYKRMVSK--GIRPDAFTYPSVLKACGETLDVAFGR 164
Query: 137 QVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSG 196
V S+++V NALI MY ++ + R++F+ ++D SWN +I Y G
Sbjct: 165 VVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEG 224
Query: 197 NMSQAKELFDEM----QEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFV 252
S+A ELFD+M E V++W+ I G +Q G ++ AL RM + +
Sbjct: 225 MWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMI 284
Query: 253 SALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAK 312
L ACS + A+ GK IH + + ++I MY+KC ++ A VF +
Sbjct: 285 IGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVF-RQTEE 343
Query: 313 RKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLY 372
+ WN++I G+A K EA + ++M V PN +T ++L C+ ++ GK +
Sbjct: 344 NSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEF 403
Query: 373 F-----RLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNA 427
R DY ++ + +VD+ +++G + A+ +S + D + ++++
Sbjct: 404 HCYILRRKCFKDYTML-----WNSLVDVYAKSGKIVAAKQ-VSDLMSKRDEVTYTSLIDG 457
Query: 428 CRIYKDMERGYRIGRIIKEM-----DPNHV 452
Y + G + KEM P+HV
Sbjct: 458 ---YGNQGEGGVALALFKEMTRSGIKPDHV 484
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 115/277 (41%), Gaps = 36/277 (12%)
Query: 88 AHSLSPSSCNDSLMVFRLLTRDSGLSPNR----YSFVFTFGACGNGLSVQEGEQVRSHAV 143
H S +D+ F LL S + + +S AC + + G QV +H +
Sbjct: 11 GHLASHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCI 70
Query: 144 KVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKE 203
G++ + +V L+ Y + L + + E + WN +IA+Y E
Sbjct: 71 SSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYA-------KNE 123
Query: 204 LFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVA 263
LF+E +IA Y RM+ G +P+ +T+ S L AC +
Sbjct: 124 LFEE-----------VIAAY-------------KRMVSKGIRPDAFTYPSVLKACGETLD 159
Query: 264 LDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIG 323
+ G+ +H I K + + ++I MY + + A R+F + +R WNA+I
Sbjct: 160 VAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLF-DRMFERDAVSWNAVIN 218
Query: 324 GFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNAC 360
+A G SEA ++F KM V + +T+ + C
Sbjct: 219 CYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGC 255
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 139/478 (29%), Positives = 247/478 (51%), Gaps = 48/478 (10%)
Query: 64 LSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTF 123
L +F Q+ + ++ + TMI S+ +D++ +F L R G+ PN +FV
Sbjct: 327 LEAVKSVFHQMSERNVVSWTTMI------SSNKDDAVSIF-LNMRFDGVYPNEVTFVGLI 379
Query: 124 GACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLY 183
A ++EG ++ +K G S V N+ I +Y K+ +E
Sbjct: 380 NAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALE--------------- 424
Query: 184 SWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVG 243
AK+ F+++ ++++SW+ +I+G+ Q G EAL F
Sbjct: 425 ----------------DAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSA-AAE 467
Query: 244 PKPNEYTFVSALAACS--NLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIES 301
PNEYTF S L A + +++ QG+ H+ + + + + ++++DMYAK G I+
Sbjct: 468 TMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDE 527
Query: 302 ASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACS 361
+ +VF E + K + + W ++I ++ HG + +F KM ENV+P+ VTF+++L AC+
Sbjct: 528 SEKVFNEMSQKNQ-FVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACN 586
Query: 362 HGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIW 421
MV++G F +M+ Y + P EHY CMVD+L RAG LKEAE+++S +P P ++
Sbjct: 587 RKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESML 646
Query: 422 GAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEIS 481
++L +CR++ +++ G ++ + EM P G +V + NIY+ W+ A +R+
Sbjct: 647 QSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKK 706
Query: 482 TATKKIPGCSSIELNG-----TFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPV 534
+K+ G S I++ T F GD+SHP+S E+Y ++ + ++ + G V V
Sbjct: 707 NVSKE-AGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVEIIGLEMNLEGKVAV 763
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 173/399 (43%), Gaps = 54/399 (13%)
Query: 35 QTHAQLVTTALISHHVSANKFLKLVADAS-LSYAHKLFDQIPQPDLFIYNTMIKAHSLSP 93
Q H T+ S +N + + A A +F+ + PD+ +NT+ LS
Sbjct: 97 QIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTI-----LSG 151
Query: 94 SSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFV 153
N + F + + +G+ + +++ C G Q++S VK GL+S++ V
Sbjct: 152 FDDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVV 211
Query: 154 VNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDV 213
N+ I M Y SG+ A+ +FDEM +D+
Sbjct: 212 GNSFITM-------------------------------YSRSGSFRGARRVFDEMSFKDM 240
Query: 214 VSWSTIIAGYVQVGCF-MEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHS 272
+SW+++++G Q G F EA+ F M++ G + + +F S + C + L + IH
Sbjct: 241 ISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHG 300
Query: 273 F-IGRGEIKMNERLLAS---IIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMH 328
I RG E LL ++ Y+KCG +E+ VF + ++R V W MI
Sbjct: 301 LCIKRGY----ESLLEVGNILMSRYSKCGVLEAVKSVFHQM-SERNVVSWTTMIS----- 350
Query: 329 GKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEH 388
+A+ +F M+ + V PN+VTFV L+NA ++EG L + G + E
Sbjct: 351 SNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEG-LKIHGLCIKTGFVSEPSV 409
Query: 389 YGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNA 427
+ L ++ L++A+ + ++ W A+++
Sbjct: 410 GNSFITLYAKFEALEDAKKAFEDITF-REIISWNAMISG 447
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 144/322 (44%), Gaps = 41/322 (12%)
Query: 23 LVDTCKSIQQIKQ---THAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIPQPD 78
L++ K +QIK+ H + T +S N F+ L A +L A K F+ I +
Sbjct: 378 LINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFRE 437
Query: 79 LFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSF--VFTFGACGNGLSVQEGE 136
+ +N MI + + S +++L +F L+ + PN Y+F V A +SV++G+
Sbjct: 438 IISWNAMISGFAQNGFS-HEALKMF--LSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQ 494
Query: 137 QVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSG 196
+ +H +K+GL+S V +AL+ MY K G ++ KVF K+ + W ++I+AY G
Sbjct: 495 RCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHG 554
Query: 197 NMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALA 256
+ F ++ FH+M++ P+ TF+S L
Sbjct: 555 D-------------------------------FETVMNLFHKMIKENVAPDLVTFLSVLT 583
Query: 257 ACSNLVALDQGKWIHS-FIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKV 315
AC+ +D+G I + I ++ + + ++DM + G ++ A + E
Sbjct: 584 ACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGE 643
Query: 316 WPWNAMIGGFAMHGKPSEAIKV 337
+M+G +HG KV
Sbjct: 644 SMLQSMLGSCRLHGNVKMGAKV 665
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/379 (32%), Positives = 198/379 (52%), Gaps = 33/379 (8%)
Query: 98 DSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNAL 157
D +V+ TR + + + V C + G + +A+K GL + VVN L
Sbjct: 329 DIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGL 388
Query: 158 IGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWS 217
I MY K+ VE LF+++QE ++SW+
Sbjct: 389 ITMYSKFDDVE-------------------------------TVLFLFEQLQETPLISWN 417
Query: 218 TIIAGYVQVGCFMEALDFFHRMLQVGPK-PNEYTFVSALAACSNLVALDQGKWIHSFIGR 276
++I+G VQ G A + FH+M+ G P+ T S LA CS L L+ GK +H + R
Sbjct: 418 SVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLR 477
Query: 277 GEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIK 336
+ + ++IDMYAKCG A VF A WN+MI G+++ G A+
Sbjct: 478 NNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTA-TWNSMISGYSLSGLQHRALS 536
Query: 337 VFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLL 396
+ +M+ + + P+++TF+ +L+AC+HG V+EGK+ FR M+ ++GI P ++HY MV LL
Sbjct: 537 CYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLL 596
Query: 397 SRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHV 456
RA L EA +I M + PD A+WGA+L+AC I++++E G + R + +D + G +V
Sbjct: 597 GRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYV 656
Query: 457 LLGNIYSSSGRWNDARMLR 475
L+ N+Y++ W+D +R
Sbjct: 657 LMSNLYATEAMWDDVVRVR 675
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 161/348 (46%), Gaps = 52/348 (14%)
Query: 73 QIPQPDLFIYNTMIKAHSLSPSS-----CNDSLMVFRLLTRDSGLSPNRYSFVFTFGACG 127
+I +P + +Y + HSL S + + +FR L R S L+PN ++ A
Sbjct: 2 RITKP-ITLYRDLSYFHSLLKSCIHGEISSSPITIFRDLLRSS-LTPNHFTMSIFLQATT 59
Query: 128 ---NGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYS 184
N +Q EQV++H K GLD V+V +L+ +Y K G V
Sbjct: 60 TSFNSFKLQV-EQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCV----------------- 101
Query: 185 WNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGP 244
+ A+ LFDEM E+D V W+ +I GY + G +A F MLQ G
Sbjct: 102 --------------TSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGF 147
Query: 245 KPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASR 304
P+ T V+ L C + QG+ +H + ++++ ++ ++I Y+KC E+ SA
Sbjct: 148 SPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEV 207
Query: 305 VFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNA-CSHG 363
+F E K V WN MIG ++ G EAI VF+ M +NV + VT + LL+A SH
Sbjct: 208 LFREMKDKSTV-SWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHE 266
Query: 364 YMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISS 411
+ +V G++ +I +V SR G L AE + +S
Sbjct: 267 PL--------HCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYAS 306
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 107/465 (23%), Positives = 193/465 (41%), Gaps = 77/465 (16%)
Query: 32 QIKQTHAQLVTTALISHHVSANKFLKL-VADASLSYAHKLFDQIPQPDLFIYNTMIKAHS 90
Q++Q L + L L L + ++ A LFD++P+ D ++N +I +S
Sbjct: 68 QVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYS 127
Query: 91 LSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSN 150
+ C D+ +F ++ + G SP+ + V CG V +G V A K GL+ +
Sbjct: 128 RNGYEC-DAWKLFIVMLQQ-GFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELD 185
Query: 151 VFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQE 210
V NALI Y K + +F DK SWNTMI AY SG +A +F M E
Sbjct: 186 SQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFE 245
Query: 211 Q---------------------------------DVVSWSTIIAGYVQVGCFME------ 231
+ D+ ++++ Y + GC +
Sbjct: 246 KNVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYA 305
Query: 232 -------------------------ALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQ 266
A+ +F + Q+ K + V L C +D
Sbjct: 306 SAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDI 365
Query: 267 GKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFA 326
G +H + + + ++ +I MY+K ++E+ +F E + + WN++I G
Sbjct: 366 GMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLF-EQLQETPLISWNSVISGCV 424
Query: 327 MHGKPSEAIKVFQKMKVE-NVSPNKVTFVALLNACSHGYMVEEGK-LYFRLMVSDYGIIP 384
G+ S A +VF +M + + P+ +T +LL CS + GK L+ + +++
Sbjct: 425 QSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNF---- 480
Query: 385 EIEHYGC--MVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNA 427
E E++ C ++D+ ++ G +AE + S+ AP A W ++++
Sbjct: 481 ENENFVCTALIDMYAKCGNEVQAESVFKSIK-APCTATWNSMISG 524
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/328 (20%), Positives = 129/328 (39%), Gaps = 40/328 (12%)
Query: 16 HCCRLASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQI 74
H C+ +S +D S+ H + + L + + N + + + + LF+Q+
Sbjct: 355 HGCKKSSHIDIGMSL------HGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQL 408
Query: 75 PQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQE 134
+ L +N++I + + + VF + GL P+ + C +
Sbjct: 409 QETPLISWNSVISG-CVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNL 467
Query: 135 GEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVG 194
G+++ + ++ ++ FV ALI MY K G VF+ +WN+MI+ Y
Sbjct: 468 GKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSL 527
Query: 195 SGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSA 254
SG +A + EM+E+ G KP+E TF+
Sbjct: 528 SGLQHRALSCYLEMREK-------------------------------GLKPDEITFLGV 556
Query: 255 LAACSNLVALDQGK-WIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKR 313
L+AC++ +D+GK + I I + A ++ + + A + W+ + K
Sbjct: 557 LSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKP 616
Query: 314 KVWPWNAMIGGFAMHGKPSEAIKVFQKM 341
W A++ +H + V +KM
Sbjct: 617 DSAVWGALLSACIIHRELEVGEYVARKM 644
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 215 bits (547), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 138/465 (29%), Positives = 248/465 (53%), Gaps = 49/465 (10%)
Query: 20 LASLVDTCKSIQQIK---QTHAQLVTTALISHHVS-ANKFLKLVADASLS-YAHKLFDQI 74
ASL++TC S++ I + H L+ L+ +++ ++K ++L A + AH++FD++
Sbjct: 95 FASLLETCYSLRAIDHGVRVH-HLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRM 153
Query: 75 PQPD--LFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSV 132
+ D F +N++I ++ D++ ++ + D G+ P+R++F ACG SV
Sbjct: 154 SKRDSSPFAWNSLISGYA-ELGQYEDAMALYFQMAED-GVKPDRFTFPRVLKACGGIGSV 211
Query: 133 QEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAY 192
Q GE + VK G +V+V+NAL+ M Y
Sbjct: 212 QIGEAIHRDLVKEGFGYDVYVLNALVVM-------------------------------Y 240
Query: 193 VGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFV 252
G++ +A+ +FD + +D VSW++++ GY+ G EALD F M+Q G +P++
Sbjct: 241 AKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAIS 300
Query: 253 SALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAK 312
S LA +++ G+ +H ++ R ++ + ++I +Y+K G++ A +F + +
Sbjct: 301 SVLA---RVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIF-DQMLE 356
Query: 313 RKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLY 372
R WNA+I H K S +K F++M N P+ +TFV++L+ C++ MVE+G+
Sbjct: 357 RDTVSWNAIISA---HSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERL 413
Query: 373 FRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMI-SSMPMAPDVAIWGAVLNACRIY 431
F LM +YGI P++EHY CMV+L RAG+++EA MI M + +WGA+L AC ++
Sbjct: 414 FSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLH 473
Query: 432 KDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLRE 476
+ + G + + E++P++ LL IYS + R D +R+
Sbjct: 474 GNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQ 518
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 212 bits (540), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 157/484 (32%), Positives = 242/484 (50%), Gaps = 29/484 (5%)
Query: 17 CCRLASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIP 75
C ++ ++VD K HAQ + L + L + + A K FD I
Sbjct: 114 CGKMENMVDG-------KPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIA 166
Query: 76 QPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRY-SFVFTFGACGNGLSVQE 134
+ + +N+++ + L +++ VF + +S N S G GN S+
Sbjct: 167 EKNTVSWNSLLHGY-LESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFS 225
Query: 135 GEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVG 194
++S A N LIG Y ++ R F+ K+ SW TMI+ Y
Sbjct: 226 AMPLKSPAS----------WNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTK 275
Query: 195 SGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGP--KPNEYTFV 252
G++ A+ELF M ++D + + +IA Y Q G +AL F +ML+ +P+E T
Sbjct: 276 LGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLS 335
Query: 253 SALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAK 312
S ++A S L G W+ S+I IK+++ L S+ID+Y K G+ A ++F N K
Sbjct: 336 SVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKK 395
Query: 313 RKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLY 372
V ++AMI G ++G +EA +F M + + PN VTF LL+A SH +V+EG
Sbjct: 396 DTV-SYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKC 454
Query: 373 FRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYK 432
F M D+ + P +HYG MVD+L RAG L+EA ++I SMPM P+ +WGA+L A ++
Sbjct: 455 FNSM-KDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHN 513
Query: 433 DMERG-YRIGRIIK-EMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGC 490
++E G +K E DP H L IYSS GRW+DAR +R+ + K + GC
Sbjct: 514 NVEFGEIACSHCVKLETDPTGYLSH--LAMIYSSVGRWDDARTVRDSIKEKKLCKTL-GC 570
Query: 491 SSIE 494
S +E
Sbjct: 571 SWVE 574
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 113/458 (24%), Positives = 213/458 (46%), Gaps = 26/458 (5%)
Query: 19 RLASLVDTCKSIQQIKQTHAQLVTT------ALISHHVSANKFLKLVADASLSYAHKLFD 72
+L + C ++Q KQ HAQLV ++ H F K + ++Y ++
Sbjct: 5 KLRFFLQRCVVLEQAKQVHAQLVVNRYNHLEPILVHQTL--HFTKEFSRNIVTYVKRILK 62
Query: 73 QIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSV 132
D F + +++ LS + + +SG+ P+ ++ ACG ++
Sbjct: 63 GFNGHDSFSWGCLVRF--LSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENM 120
Query: 133 QEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAY 192
+G+ + + A+K GL V+V L+G+Y + G +E +K F+ +K+ SWN+++ Y
Sbjct: 121 VDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGY 180
Query: 193 VGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFV 252
+ SG + +A+ +FD++ E+D VSW+ II+ Y + G A F M P + +
Sbjct: 181 LESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSP-ASWNILI 239
Query: 253 SALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAK 312
C + K ++ K N ++I Y K G+++SA +F + K
Sbjct: 240 GGYVNCREM------KLARTYFDAMPQK-NGVSWITMISGYTKLGDVQSAEELFRLMSKK 292
Query: 313 RKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVEN--VSPNKVTFVALLNACSHGYMVEEGK 370
K+ ++AMI + +GKP +A+K+F +M N + P+++T ++++A S G
Sbjct: 293 DKL-VYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGT 351
Query: 371 LYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRI 430
+ ++++GI + ++DL + G +A M S++ D + A++ C I
Sbjct: 352 -WVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLN-KKDTVSYSAMIMGCGI 409
Query: 431 YKDMERGYRI--GRIIKEMDPNHVGCHVLLGNIYSSSG 466
+ I K++ PN V LL + YS SG
Sbjct: 410 NGMATEANSLFTAMIEKKIPPNVVTFTGLL-SAYSHSG 446
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 124/406 (30%), Positives = 203/406 (50%), Gaps = 12/406 (2%)
Query: 34 KQTHAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIPQPDLFIYNTMIKAHSLS 92
+Q H L+ + V N + A +L + FD I ++ +N ++ ++
Sbjct: 336 RQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANK 395
Query: 93 PSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVF 152
SL + L G P Y+F +C V E +Q+ S V++G + N +
Sbjct: 396 DGPICLSLFLQML---QMGFRPTEYTFSTALKSC----CVTELQQLHSVIVRMGYEDNDY 448
Query: 153 VVNALIGMYGKWGLVEYGRKVFEWAVD-KDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQ 211
V+++L+ Y K L+ + +WA + N + Y G ++ +L +++
Sbjct: 449 VLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQP 508
Query: 212 DVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIH 271
D VSW+ IA + E ++ F MLQ +P++YTFVS L+ CS L L G IH
Sbjct: 509 DTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIH 568
Query: 272 SFIGRGEIKMNERLLASI-IDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGK 330
I + + + + ++ IDMY KCG I S +VF E ++ + W A+I +HG
Sbjct: 569 GLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVF-EETREKNLITWTALISCLGIHGY 627
Query: 331 PSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYG 390
EA++ F++ P++V+F+++L AC HG MV+EG F+ M DYG+ PE++HY
Sbjct: 628 GQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKM-KDYGVEPEMDHYR 686
Query: 391 CMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMER 436
C VDLL+R G LKEAE +I MP D +W L+ C + + +R
Sbjct: 687 CAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCNRFAEEQR 732
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 193/434 (44%), Gaps = 50/434 (11%)
Query: 1 MSRFCSTLTKPFHSDHCCRLASLVDTCK---SIQQIKQTHAQLVT--TALISHHVSANKF 55
MS C L H+D R+ SL++ C+ S + K HA +T + L+ N
Sbjct: 1 MSLSCGDLAN--HND---RVVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNI 55
Query: 56 LKLVAD-ASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSP 114
+ L +S A K+FDQ+P+ + +NT+IK +S + + VF + R G P
Sbjct: 56 ISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYS-KYGDVDKAWGVFSEM-RYFGYLP 113
Query: 115 NRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGL-DSNVFVVNALIGMYGKWGLVEYGRKV 173
N+ S V +C + L V+ G Q+ ++K GL ++ FV L+ +YG+ L+E +V
Sbjct: 114 NQ-STVSGLLSCAS-LDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQV 171
Query: 174 FEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEAL 233
FE +M + + +W+ +++ G E +
Sbjct: 172 FE-------------------------------DMPFKSLETWNHMMSLLGHRGFLKECM 200
Query: 234 DFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMY 293
FF ++++G E +F+ L S + LD K +H + + ++ S+I Y
Sbjct: 201 FFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAY 260
Query: 294 AKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTF 353
KCG A R+F + + WNA+I A P +A+K+F M SPN+ T+
Sbjct: 261 GKCGNTHMAERMF-QDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTY 319
Query: 354 VALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMP 413
V++L S ++ G+ +++ + G I ++D ++ G L+++ +
Sbjct: 320 VSVLGVSSLVQLLSCGRQIHGMLIKN-GCETGIVLGNALIDFYAKCGNLEDSR-LCFDYI 377
Query: 414 MAPDVAIWGAVLNA 427
++ W A+L+
Sbjct: 378 RDKNIVCWNALLSG 391
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 163/395 (41%), Gaps = 69/395 (17%)
Query: 64 LSYAHKLFDQIPQPDLFIYNTMIK--AHSLSPSSCNDSLMVFRLLTR-DSGLSPNRYSFV 120
L A ++F+ +P L +N M+ H C + FR L R + L+ + + V
Sbjct: 165 LEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKEC---MFFFRELVRMGASLTESSFLGV 221
Query: 121 FTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDK 180
+C L + + Q+ A K GLD + VVN+LI
Sbjct: 222 LKGVSCVKDLDISK--QLHCSATKKGLDCEISVVNSLI---------------------- 257
Query: 181 DLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRML 240
+AY GN A+ +F + D+VSW+ II + ++AL F M
Sbjct: 258 ---------SAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMP 308
Query: 241 QVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIE 300
+ G PN+ T+VS L S + L G+ IH + + + L ++ID YAKCG +E
Sbjct: 309 EHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLE 368
Query: 301 SASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNAC 360
SR+ +++ + + WNA++ G+A P + +F +M P + TF L +C
Sbjct: 369 D-SRLCFDYIRDKNIVCWNALLSGYANKDGPI-CLSLFLQMLQMGFRPTEYTFSTALKSC 426
Query: 361 S-------HGYMVEEG------------KLYFR-------LMVSDYGIIP-EIEHYGCMV 393
H +V G + Y + L++ D+ P + +
Sbjct: 427 CVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVA 486
Query: 394 DLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNAC 428
+ SR G E+ +IS++ PD W + AC
Sbjct: 487 GIYSRRGQYHESVKLISTLEQ-PDTVSWNIAIAAC 520
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 148/372 (39%), Gaps = 74/372 (19%)
Query: 24 VDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVADASLSY-AHKLFDQIPQPDLFIY 82
V K + KQ H L N + ++ A ++F D+ +
Sbjct: 225 VSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSW 284
Query: 83 NTMIKAHSLSPSSCNDSLMVFRLLTR--DSGLSPNRYSFVFTFGACGNGLSVQEGEQVRS 140
N +I A + S + L +L + G SPN+ ++V G + G Q+
Sbjct: 285 NAIICATAKS----ENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHG 340
Query: 141 HAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQ 200
+K G ++ + + NALI Y K G +E R F++ DK++ WN +++ Y
Sbjct: 341 MLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKD---- 396
Query: 201 AKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSN 260
G + L F +MLQ+G +P EYTF +AL +C
Sbjct: 397 ---------------------GPI-------CLSLFLQMLQMGFRPTEYTFSTALKSC-- 426
Query: 261 LVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNA 320
+ + + +HS I R + N+ +L+S++ YAK + A + + V P N
Sbjct: 427 --CVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNI 484
Query: 321 MIGGFAMHGKPSEAIK-------------------------------VFQKMKVENVSPN 349
+ G ++ G+ E++K +F+ M N+ P+
Sbjct: 485 VAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPD 544
Query: 350 KVTFVALLNACS 361
K TFV++L+ CS
Sbjct: 545 KYTFVSILSLCS 556
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 138/482 (28%), Positives = 234/482 (48%), Gaps = 40/482 (8%)
Query: 34 KQTHAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIPQPDLFIYNTMIKAHSLS 92
K HA+++ + ++ N L + + A +F +I P+L +N++I S +
Sbjct: 320 KLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSEN 379
Query: 93 PSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVF 152
+++++R L R S P+ Y+F A G+ + K+G + +VF
Sbjct: 380 GFG-EQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVF 438
Query: 153 VVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQD 212
V L+ MY K E +KV FD M+E+D
Sbjct: 439 VGTTLLSMYFKNREAESAQKV-------------------------------FDVMKERD 467
Query: 213 VVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHS 272
VV W+ +I G+ ++G A+ FF M + + + ++ S + ACS++ L QG+ H
Sbjct: 468 VVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHC 527
Query: 273 FIGRGEIKMNERLLASIIDMYAKCGEIESASRVF-WEHNAKRKVWPWNAMIGGFAMHGKP 331
R + +++DMY K G+ E+A +F N K WN+M+G ++ HG
Sbjct: 528 LAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKC--WNSMLGAYSQHGMV 585
Query: 332 SEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGC 391
+A+ F+++ P+ VT+++LL ACSH +GK + M + GI +HY C
Sbjct: 586 EKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQM-KEQGIKAGFKHYSC 644
Query: 392 MVDLLSRAGLLKEAEDMISSMPMAPDVA-IWGAVLNACRIYKDMERGYRIGRIIKEMDPN 450
MV+L+S+AGL+ EA ++I P + A +W +L+AC ++++ G I ++DP
Sbjct: 645 MVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPE 704
Query: 451 HVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNGTFYQ-FLVGDRSH 509
H+LL N+Y+ +GRW D +R K A+ K PG S IE+N Q F GD+S+
Sbjct: 705 DTATHILLSNLYAVNGRWEDVAEMRRKIR-GLASSKDPGLSWIEVNNNNTQVFSSGDQSN 763
Query: 510 PQ 511
P+
Sbjct: 764 PE 765
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 162/363 (44%), Gaps = 47/363 (12%)
Query: 20 LASLVDTCKSIQQIK---QTHAQLVTT----ALISHHVSANKFLKLVADASLSYAHKLFD 72
+ L C SI +K Q HA ++T A S + + N V SL A K+FD
Sbjct: 97 VVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFD 156
Query: 73 QIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSG--LSPNRYSFVFTFGACGNGL 130
++P ++ YN + A+S +P + F L T + + PN +F C
Sbjct: 157 KMPHRNVVSYNALYSAYSRNPDFAS---YAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLE 213
Query: 131 SVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIA 190
V G + S +K+G NV V +++GMY G +E R++
Sbjct: 214 DVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRI----------------- 256
Query: 191 AYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYT 250
FD + +D V+W+T+I G ++ + L FF ML G P ++T
Sbjct: 257 --------------FDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFT 302
Query: 251 FVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWE-H 309
+ L CS L + GK IH+ I + + L +++DMY CG++ A VF H
Sbjct: 303 YSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIH 362
Query: 310 NAKRKVWPWNAMIGGFAMHGKPSEAIKVFQK-MKVENVSPNKVTFVALLNACSHGYMVEE 368
N + WN++I G + +G +A+ ++++ +++ P++ TF A ++A +
Sbjct: 363 NP--NLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVH 420
Query: 369 GKL 371
GKL
Sbjct: 421 GKL 423
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 129/254 (50%), Gaps = 6/254 (2%)
Query: 177 AVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFME-ALDF 235
A + Y+ N +I+ YV G++ QA+++FD+M ++VVS++ + + Y + F A
Sbjct: 127 AATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPL 186
Query: 236 FHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAK 295
M KPN TF S + C+ L + G ++S I + N + S++ MY+
Sbjct: 187 TTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSS 246
Query: 296 CGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVA 355
CG++ESA R+F N R WN MI G + K + + F+ M + V P + T+
Sbjct: 247 CGDLESARRIFDCVN-NRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSI 305
Query: 356 LLNACSHGYMVEEGKL-YFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPM 414
+LN CS GKL + R++VSD + ++ ++D+ G ++EA + +
Sbjct: 306 VLNGCSKLGSYSLGKLIHARIIVSDS--LADLPLDNALLDMYCSCGDMREAFYVFGRIH- 362
Query: 415 APDVAIWGAVLNAC 428
P++ W ++++ C
Sbjct: 363 NPNLVSWNSIISGC 376
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 91/189 (48%), Gaps = 11/189 (5%)
Query: 183 YSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIA--GYVQVGCFMEA----LDFF 236
Y+ N +I+ YV ++ QA+++FD+M ++++V+ + A YV +G + + L F
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSF 82
Query: 237 HRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFI---GRGEIKMNERLLASIIDMY 293
+ + + V C ++ L + + IH+ + G G + ++I MY
Sbjct: 83 QMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMY 142
Query: 294 AKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGK-PSEAIKVFQKMKVENVSPNKVT 352
+CG +E A +VF + R V +NA+ ++ + S A + M E V PN T
Sbjct: 143 VRCGSLEQARKVF-DKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSST 201
Query: 353 FVALLNACS 361
F +L+ C+
Sbjct: 202 FTSLVQVCA 210
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 206 bits (524), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 122/426 (28%), Positives = 216/426 (50%), Gaps = 39/426 (9%)
Query: 67 AHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGAC 126
A ++F+ + DL ++N ++ ++ L+ +++ + +L+ D Y FTF +
Sbjct: 196 ARRVFEAVLDRDLVLWNALVSSYVLN-GMIDEAFGLLKLMGSDKNRFRGDY---FTFSSL 251
Query: 127 GNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWN 186
+ +++G+Q+ + KV ++ V AL+ MY K
Sbjct: 252 LSACRIEQGKQIHAILFKVSYQFDIPVATALLNMYAK----------------------- 288
Query: 187 TMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKP 246
S ++S A+E F+ M ++VVSW+ +I G+ Q G EA+ F +ML +P
Sbjct: 289 --------SNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQP 340
Query: 247 NEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVF 306
+E TF S L++C+ A+ + K + + + + + S+I Y++ G + A F
Sbjct: 341 DELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCF 400
Query: 307 WEHNAKR-KVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYM 365
H+ + + W ++IG A HG E++++F+ M ++ + P+K+TF+ +L+ACSHG +
Sbjct: 401 --HSIREPDLVSWTSVIGALASHGFAEESLQMFESM-LQKLQPDKITFLEVLSACSHGGL 457
Query: 366 VEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVL 425
V+EG F+ M Y I E EHY C++DLL RAG + EA D+++SMP P A
Sbjct: 458 VQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFT 517
Query: 426 NACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATK 485
C I++ E + + E++P + +L N Y S G WN A +LR++ +
Sbjct: 518 GGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKRERRNCYNP 577
Query: 486 KIPGCS 491
K PGCS
Sbjct: 578 KTPGCS 583
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 112/434 (25%), Positives = 204/434 (47%), Gaps = 53/434 (12%)
Query: 30 IQQIKQTHAQLVTTALISHHVSANKFLKLVADA-SLSYAHKLFDQIPQPDLFIYNTMIKA 88
+ +KQ H +V + + NK L+ A KLFD++P ++ +N +I
Sbjct: 52 LSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHG 111
Query: 89 ---------HSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVR 139
H C S ++F + +S + SF+ C + +++ G Q+
Sbjct: 112 VIQRDGDTNHRAHLGFCYLSRILF------TDVSLDHVSFMGLIRLCTDSTNMKAGIQLH 165
Query: 140 SHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMS 199
VK GL+S+ F +L+ YGK GL+ R+VFE +D+DL WN ++++YV +G +
Sbjct: 166 CLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMID 225
Query: 200 QAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACS 259
+A L M +R + + +TF S L+AC
Sbjct: 226 EAFGLLKLMGSDK------------------------NRF-----RGDYFTFSSLLSACR 256
Query: 260 NLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWN 319
++QGK IH+ + + + + + ++++MYAK + A F E R V WN
Sbjct: 257 ----IEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECF-ESMVVRNVVSWN 311
Query: 320 AMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSD 379
AMI GFA +G+ EA+++F +M +EN+ P+++TF ++L++C+ + E K + MV+
Sbjct: 312 AMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIK-QVQAMVTK 370
Query: 380 YGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYR 439
G + ++ SR G L EA S+ PD+ W +V+ A + E +
Sbjct: 371 KGSADFLSVANSLISSYSRNGNLSEALLCFHSIR-EPDLVSWTSVIGALASHGFAEESLQ 429
Query: 440 I-GRIIKEMDPNHV 452
+ +++++ P+ +
Sbjct: 430 MFESMLQKLQPDKI 443
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 205 bits (522), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 139/483 (28%), Positives = 242/483 (50%), Gaps = 50/483 (10%)
Query: 22 SLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIPQPDLF 80
S++ +C Q H + T + + +N + + + AHK+F+ + + DL
Sbjct: 296 SVMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLV 355
Query: 81 IYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGAC-GNGLSVQEGEQVR 139
+NTMI +++ + S M G+ P+ FTFG+ L + E V+
Sbjct: 356 TWNTMISSYN--QAKLGKSAMSVYKRMHIIGVKPDE----FTFGSLLATSLDLDVLEMVQ 409
Query: 140 SHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMS 199
+ +K GL S + + NALI Y K +G +
Sbjct: 410 ACIIKFGLSSKIEISNALISAYSK-------------------------------NGQIE 438
Query: 200 QAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQ--VGPKPNEYTFVSALAA 257
+A LF+ ++++SW+ II+G+ G E L+ F +L+ V P+ YT + L+
Sbjct: 439 KADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSI 498
Query: 258 CSNLVALDQGKWIHSFIGR-GEIKMNERLLA-SIIDMYAKCGEIESASRVFWEHNAKRKV 315
C + +L G H+++ R G+ K E L+ ++I+MY++CG I+++ VF +++ V
Sbjct: 499 CVSTSSLMLGSQTHAYVLRHGQFK--ETLIGNALINMYSQCGTIQNSLEVF-NQMSEKDV 555
Query: 316 WPWNAMIGGFAMHGKPSEAIKVFQKMKVE-NVSPNKVTFVALLNACSHGYMVEEGKLYFR 374
WN++I ++ HG+ A+ ++ M+ E V P+ TF A+L+ACSH +VEEG F
Sbjct: 556 VSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFN 615
Query: 375 LMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDM--ISSMPMAPDVAIWGAVLNACRIYK 432
MV +G+I ++H+ C+VDLL RAG L EAE + IS + V +W A+ +AC +
Sbjct: 616 SMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHG 675
Query: 433 DMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSS 492
D++ G + +++ E + + +V L NIY+ +G W +A R + A K+ GCS
Sbjct: 676 DLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQ-RGCSW 734
Query: 493 IEL 495
+ L
Sbjct: 735 MRL 737
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 149/282 (52%), Gaps = 12/282 (4%)
Query: 98 DSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNAL 157
++L +F + R + L P++YS + G QV +A++ GL + V N L
Sbjct: 39 NALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTL 98
Query: 158 IGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVS-W 216
+ +Y + G + +K F+ + D+YSW T+++A G++ A E+FD+M E+D V+ W
Sbjct: 99 LSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIW 158
Query: 217 STIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGR 276
+ +I G + G +++ F M ++G + +++ F + L+ C + +LD GK +HS + +
Sbjct: 159 NAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMC-DYGSLDFGKQVHSLVIK 217
Query: 277 GEIKMNERLLASIIDMYAKCGEIESASRVFWEHN-AKRKVWPWNAMIGGFAMHGKPSEAI 335
+ ++ ++I MY C + A VF E + A R +N +I G A K E++
Sbjct: 218 AGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGF-KRDESL 276
Query: 336 KVFQKMKVENVSPNKVTFVALLNACS--------HGYMVEEG 369
VF+KM ++ P +TFV+++ +CS HG ++ G
Sbjct: 277 LVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQVHGLAIKTG 318
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 176/427 (41%), Gaps = 77/427 (18%)
Query: 35 QTHAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSP 93
Q H + + L+ H +N L L +L+ K FD+I +PD++ + T++ A S
Sbjct: 78 QVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSA-SFKL 136
Query: 94 SSCNDSLMVF-RLLTRDS------------------------------GLSPNRYSFVFT 122
+ VF ++ RD G+ +++ F
Sbjct: 137 GDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATI 196
Query: 123 FGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDL 182
C G S+ G+QV S +K G VVNALI MY +V VFE
Sbjct: 197 LSMCDYG-SLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFE------- 248
Query: 183 YSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFM--EALDFFHRML 240
T +A +D V+++ +I G + F E+L F +ML
Sbjct: 249 ---ETDVAV-------------------RDQVTFNVVIDG---LAGFKRDESLLVFRKML 283
Query: 241 QVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIE 300
+ +P + TFVS + +CS G +H + + + + + MY+ +
Sbjct: 284 EASLRPTDLTFVSVMGSCS---CAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFG 340
Query: 301 SASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNAC 360
+A +VF E ++ + WN MI + A+ V+++M + V P++ TF +LL A
Sbjct: 341 AAHKVF-ESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLL-AT 398
Query: 361 SHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAI 420
S V E + + +G+ +IE ++ S+ G +++A D++ + ++
Sbjct: 399 SLDLDVLE---MVQACIIKFGLSSKIEISNALISAYSKNGQIEKA-DLLFERSLRKNLIS 454
Query: 421 WGAVLNA 427
W A+++
Sbjct: 455 WNAIISG 461
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 135/495 (27%), Positives = 237/495 (47%), Gaps = 47/495 (9%)
Query: 25 DTCKSIQQI------KQTHAQLVTTALISHHVSANKFLKLVA-DASLSYAHKLFDQIPQP 77
+ C S+ +I KQ H + N L++ A + ++ A +F ++P+
Sbjct: 254 EGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEV 313
Query: 78 DLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQ 137
++ +N MI S D + F RDSG PN + + GAC V+ G +
Sbjct: 314 NVVSWNIMIVGFGQEYRS--DKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRR 371
Query: 138 VRS----------HAVKVG---------------------LDSNVFVVNALIGMYGKWGL 166
+ S +A+ G L + ++ ++ +
Sbjct: 372 IFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRF 431
Query: 167 VEYGRK----VFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDE-MQEQDVVSWSTIIA 221
+E G++ V + K+ + + +IA Y M ++ +FD+ + E D+ W+++I+
Sbjct: 432 LEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMIS 491
Query: 222 GYVQVGCFMEALDFFHRMLQVGPK-PNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIK 280
G+ +AL F RM Q PNE +F + L++CS L +L G+ H + +
Sbjct: 492 GFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYV 551
Query: 281 MNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQK 340
+ + ++ DMY KCGEI+SA R F++ ++ WN MI G+ +G+ EA+ +++K
Sbjct: 552 SDSFVETALTDMYCKCGEIDSA-RQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRK 610
Query: 341 MKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAG 400
M P+ +TFV++L ACSH +VE G M +GI PE++HY C+VD L RAG
Sbjct: 611 MISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAG 670
Query: 401 LLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGN 460
L++AE + + P +W +L++CR++ D+ R+ + +DP +VLL N
Sbjct: 671 RLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSN 730
Query: 461 IYSSSGRWNDARMLR 475
YSS +W+D+ L+
Sbjct: 731 TYSSLRQWDDSAALQ 745
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 169/345 (48%), Gaps = 21/345 (6%)
Query: 135 GEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVG 194
G+ + V++G+ S+ ++ N L+ +Y + G +Y RKVF+ +D+YSWN +
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 195 SGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSA 254
G++ +A E+FD M E+DVVSW+ +I+ V+ G +AL + RM+ G P+ +T S
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 255 LAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEI-ESASRVFWEHNAKR 313
L+ACS ++ G H + + N + +++ MYAKCG I + RVF +
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPN 204
Query: 314 KVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALL---------NACSHGY 364
+V + A+IGG A K EA+++F+ M + V + V +L ++ S Y
Sbjct: 205 EV-SYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIY 263
Query: 365 MVEEGK----LYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAI 420
E GK L RL G ++ ++++ ++ + AE + + MP V+
Sbjct: 264 GNELGKQIHCLALRL-----GFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSW 318
Query: 421 WGAVLNACRIYKDMERGYRIGRIIKE-MDPNHVGCHVLLGNIYSS 464
++ + Y+ + + R+ PN V C +LG + S
Sbjct: 319 NIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRS 363
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 112/427 (26%), Positives = 187/427 (43%), Gaps = 58/427 (13%)
Query: 51 SANKFLKLVAD-ASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRD 109
S N FL L A ++FD +P+ D+ +N MI + +L+V++ + D
Sbjct: 74 SWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVL-VRKGFEEKALVVYKRMVCD 132
Query: 110 SGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWG-LVE 168
G P+R++ AC L G + AVK GLD N+FV NAL+ MY K G +V+
Sbjct: 133 -GFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVD 191
Query: 169 YGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGC 228
YG +VFE ++SQ E VS++ +I G +
Sbjct: 192 YGVRVFE---------------------SLSQPNE----------VSYTAVIGGLARENK 220
Query: 229 FMEALDFFHRMLQVGPKPNEYTFVSALA------ACSNLVAL---DQGKWIHSFIGRGEI 279
+EA+ F M + G + + + L+ C +L + + GK IH R
Sbjct: 221 VLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGF 280
Query: 280 KMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQ 339
+ L S++++YAK ++ A +F E + V WN MI GF + ++++
Sbjct: 281 GGDLHLNNSLLEIYAKNKDMNGAELIFAEM-PEVNVVSWNIMIVGFGQEYRSDKSVEFLT 339
Query: 340 KMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRA 399
+M+ PN+VT +++L AC VE G+ F + P + + M+ S
Sbjct: 340 RMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQ-----PSVSAWNAMLSGYSNY 394
Query: 400 GLLKEAEDMISSMP---MAPDVAIWGAVLNACRIYKDMERGYRI-GRIIK-EMDPNHVGC 454
+EA M + PD +L++C + +E G +I G +I+ E+ N
Sbjct: 395 EHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNS--- 451
Query: 455 HVLLGNI 461
H++ G I
Sbjct: 452 HIVSGLI 458
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 142/330 (43%), Gaps = 42/330 (12%)
Query: 20 LASLVDTCKSIQQI---KQTHAQLVTTALISHHVSANKFLKLVADAS-LSYAHKLFDQ-I 74
L+ ++ +C ++ + KQ H ++ T + + + + + ++ + + +FD I
Sbjct: 419 LSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCI 478
Query: 75 PQPDLFIYNTMIKA--HSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSV 132
+ D+ +N+MI H++ + +L++FR + + + L PN SF +C S+
Sbjct: 479 NELDIACWNSMISGFRHNMLDTK---ALILFRRMHQTAVLCPNETSFATVLSSCSRLCSL 535
Query: 133 QEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAY 192
G Q VK G S+ FV AL MY K G ++ R+ F+ + K+ WN MI Y
Sbjct: 536 LHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGY 595
Query: 193 VGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFV 252
+G EA+ + +M+ G KP+ TFV
Sbjct: 596 GHNGRGD-------------------------------EAVGLYRKMISSGEKPDGITFV 624
Query: 253 SALAACSNLVALDQGKWIHSFIGRGE-IKMNERLLASIIDMYAKCGEIESASRVFWEHNA 311
S L ACS+ ++ G I S + R I+ I+D + G +E A ++
Sbjct: 625 SVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPY 684
Query: 312 KRKVWPWNAMIGGFAMHGKPSEAIKVFQKM 341
K W ++ +HG S A +V +K+
Sbjct: 685 KSSSVLWEILLSSCRVHGDVSLARRVAEKL 714
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 202 bits (514), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 146/509 (28%), Positives = 235/509 (46%), Gaps = 48/509 (9%)
Query: 22 SLVDTCKSIQQIKQTHAQLVTTAL-ISHHVSANKFLKLVADASLSYAHKLFDQIPQPDLF 80
S+ T ++ + H Q+V T + H+ + ++++ + IP D+
Sbjct: 253 SVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVV 312
Query: 81 IYNTMIKAHSLSPSSCNDSLMVF-RLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVR 139
+ MI + +L+VF +L S LS + V +C S G V
Sbjct: 313 CWTVMISG-LMRLGRAEKALIVFSEMLQSGSDLSSEAIASVV--ASCAQLGSFDLGASVH 369
Query: 140 SHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMS 199
+ ++ G + +N+LI MY K G +DK L
Sbjct: 370 GYVLRHGYTLDTPALNSLITMYAKCG-----------HLDKSLV---------------- 402
Query: 200 QAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRM-LQVGPKPNEYTFVSALAAC 258
+F+ M E+D+VSW+ II+GY Q +AL F M + + + +T VS L AC
Sbjct: 403 ----IFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQAC 458
Query: 259 SNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPW 318
S+ AL GK IH + R I+ + +++DMY+KCG +E+A R F + + + V W
Sbjct: 459 SSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCF-DSISWKDVVSW 517
Query: 319 NAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVS 378
+I G+ HGK A++++ + + PN V F+A+L++CSH MV++G F MV
Sbjct: 518 GILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVR 577
Query: 379 DYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGY 438
D+G+ P EH C+VDLL RA +++A P + + G +L+ACR E
Sbjct: 578 DFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVED 637
Query: 439 RIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNGT 498
I + E+ P G +V LG+ +++ RW+D + S KK+PG S IE+NG
Sbjct: 638 IICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMR-SLGLKKLPGWSKIEMNGK 696
Query: 499 FYQFLVGDRSHPQ---------SRELYSF 518
F + SH SRE+ F
Sbjct: 697 TTTFFMNHTSHSDDTVSLLKLLSREMMQF 725
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 182/392 (46%), Gaps = 45/392 (11%)
Query: 67 AHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGAC 126
A LFDQ+ Q D+ +NTMI ++ + +++R+ R GL P++ +F +
Sbjct: 198 AKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRM--RGDGLRPDQQTFGASLSVS 255
Query: 127 GNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWN 186
G ++ G + VK G D ++ + ALI M
Sbjct: 256 GTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITM-------------------------- 289
Query: 187 TMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKP 246
Y+ G + + + + +DVV W+ +I+G +++G +AL F MLQ G
Sbjct: 290 -----YLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDL 344
Query: 247 NEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVF 306
+ S +A+C+ L + D G +H ++ R ++ L S+I MYAKCG ++ S V
Sbjct: 345 SSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDK-SLVI 403
Query: 307 WEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSP-NKVTFVALLNACSHGYM 365
+E +R + WNA+I G+A + +A+ +F++MK + V + T V+LL ACS
Sbjct: 404 FERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGA 463
Query: 366 VEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVL 425
+ GKL +++ + I P +VD+ S+ G L+ A+ S+ DV WG ++
Sbjct: 464 LPVGKLIHCIVIRSF-IRPCSLVDTALVDMYSKCGYLEAAQRCFDSISW-KDVVSWGILI 521
Query: 426 NACRIYKDMERGYRIGRIIKE-----MDPNHV 452
Y +G I E M+PNHV
Sbjct: 522 AG---YGFHGKGDIALEIYSEFLHSGMEPNHV 550
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 170/384 (44%), Gaps = 53/384 (13%)
Query: 1 MSRFCSTLTKPFHSDHCCRLASLVDTCKSIQQIK---QTHAQLVTTALISHHVSANKFLK 57
+S F S L D SL+ C S+Q++ H Q++ S ++ +
Sbjct: 31 LSTFSSMLANKLLPD-TFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVN 89
Query: 58 LVAD-ASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNR 116
L A L++A K+F+++ + D+ + MI +S + +V + R G+ P
Sbjct: 90 LYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEM--RFQGIKPGP 147
Query: 117 YSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEW 176
+ + L + + + + AV G D ++ V+N+++ +
Sbjct: 148 VTLLEMLSGV---LEITQLQCLHDFAVIYGFDCDIAVMNSMLNL---------------- 188
Query: 177 AVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFF 236
Y ++ AK+LFD+M+++D+VSW+T+I+GY VG E L
Sbjct: 189 ---------------YCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLL 233
Query: 237 HRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKC 296
+RM G +P++ TF ++L+ + L+ G+ +H I + ++ L ++I MY KC
Sbjct: 234 YRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKC 293
Query: 297 GEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVAL 356
G+ E++ RV E + V W MI G G+ +A+ VF +M + ++
Sbjct: 294 GKEEASYRVL-ETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASV 352
Query: 357 LNACS-----------HGYMVEEG 369
+ +C+ HGY++ G
Sbjct: 353 VASCAQLGSFDLGASVHGYVLRHG 376
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 142/316 (44%), Gaps = 37/316 (11%)
Query: 112 LSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGR 171
L P+ ++F AC + + G + + G S+ ++ ++L+ +Y K+GL
Sbjct: 42 LLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGL----- 96
Query: 172 KVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFME 231
++ A+++F+EM+E+DVV W+ +I Y + G E
Sbjct: 97 --------------------------LAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGE 130
Query: 232 ALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIID 291
A + M G KP T + L S ++ + Q + +H F + ++ S+++
Sbjct: 131 ACSLVNEMRFQGIKPGPVTLLEML---SGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLN 187
Query: 292 MYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKV 351
+Y KC + A +F + +R + WN MI G+A G SE +K+ +M+ + + P++
Sbjct: 188 LYCKCDHVGDAKDLF-DQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQ 246
Query: 352 TFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISS 411
TF A L+ +E G++ + G ++ ++ + + G + + ++ +
Sbjct: 247 TFGASLSVSGTMCDLEMGRM-LHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLET 305
Query: 412 MPMAPDVAIWGAVLNA 427
+P DV W +++
Sbjct: 306 IP-NKDVVCWTVMISG 320
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 17/215 (7%)
Query: 231 EALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASII 290
+ L F ML P+ +TF S L AC++L L G IH + + + +S++
Sbjct: 29 QVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLV 88
Query: 291 DMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNK 350
++YAK G + A +VF E +R V W AMIG ++ G EA + +M+ + + P
Sbjct: 89 NLYAKFGLLAHARKVF-EEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGP 147
Query: 351 VTFVALLNA--------CSHGYMVEEG-KLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGL 401
VT + +L+ C H + V G +M S + + +H G DL +
Sbjct: 148 VTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQM-- 205
Query: 402 LKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMER 436
E DM+S M ++ + +V N I K + R
Sbjct: 206 --EQRDMVSWNTM---ISGYASVGNMSEILKLLYR 235
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 202 bits (513), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 140/492 (28%), Positives = 243/492 (49%), Gaps = 42/492 (8%)
Query: 34 KQTHAQLVTTALISHHVSANKFLKLVADA-SLSYAHKLFDQIPQPDLFIYNTMIKAHSLS 92
+Q H + +S+ +N ++ + SL AHK+FD++P PD+ +N+++ + +
Sbjct: 75 RQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGY-VQ 133
Query: 93 PSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLD-SNV 151
+ + +F L R S + PN +SF AC G + S VK+GL+ NV
Sbjct: 134 SGRFQEGICLFLELHR-SDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNV 192
Query: 152 FVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIA--------------------- 190
V N LI MYGK G ++ VF+ +KD SWN ++A
Sbjct: 193 VVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNP 252
Query: 191 ----------AYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRML 240
A+V SG+ + A ++ +M + SW+TI+ GYV EA +FF +M
Sbjct: 253 DTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMH 312
Query: 241 QVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIE 300
G + +EY+ LAA + L + G IH+ + + + +++IDMY+KCG ++
Sbjct: 313 SSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLK 372
Query: 301 SASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVEN-VSPNKVTFVALLNA 359
A +FW ++ + WN MI G+A +G EAIK+F ++K E + P++ TF+ LL
Sbjct: 373 HAELMFWTM-PRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAV 431
Query: 360 CSHGYMVEEGKL-YFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDV 418
CSH + E L YF +M+++Y I P +EH ++ + + G + +A+ +I D
Sbjct: 432 CSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDG 491
Query: 419 AIWGAVLNACRIYKDMERGYRIGRIIKEM---DPNHVGCHVLLGNIYSSSGRWNDARMLR 475
W A+L AC KD++ + + E+ D + ++++ N+Y+ RW + +R
Sbjct: 492 VAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEY-LYIVMSNLYAYHERWREVGQIR 550
Query: 476 EKSEISTATKKI 487
+ S K++
Sbjct: 551 KIMRESGVLKEV 562
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 111/252 (44%), Gaps = 37/252 (14%)
Query: 109 DSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVE 168
+ G P+ V GN V Q+ + K G SN + N+L+ Y +E
Sbjct: 48 NDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLE 107
Query: 169 YGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGC 228
KVF+ D D+ SWN++++ YV SG + LF E+ DV
Sbjct: 108 DAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVF-------------- 153
Query: 229 FMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHS-FIGRGEIKMNERLLA 287
PNE++F +ALAAC+ L G IHS + G K N +
Sbjct: 154 -----------------PNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGN 196
Query: 288 SIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVS 347
+IDMY KCG ++ A VF +H ++ WNA++ + +GK + F +M +
Sbjct: 197 CLIDMYGKCGFMDDAVLVF-QHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMP----N 251
Query: 348 PNKVTFVALLNA 359
P+ VT+ L++A
Sbjct: 252 PDTVTYNELIDA 263
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 115/260 (44%), Gaps = 12/260 (4%)
Query: 215 SWSTII---AGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIH 271
SWSTI+ A + +G A++ ++ G KP+ V L N + + +H
Sbjct: 23 SWSTIVPALARFGSIGVLRAAVE----LINDGEKPDASPLVHLLRVSGNYGYVSLCRQLH 78
Query: 272 SFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKP 331
++ + N RL S++ Y +E A +VF + V WN+++ G+ G+
Sbjct: 79 GYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVF-DEMPDPDVISWNSLVSGYVQSGRF 137
Query: 332 SEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGC 391
E I +F ++ +V PN+ +F A L AC+ ++ G +V + C
Sbjct: 138 QEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNC 197
Query: 392 MVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNH 451
++D+ + G + +A + M D W A++ +C +E G + +P+
Sbjct: 198 LIDMYGKCGFMDDAVLVFQHME-EKDTVSWNAIVASCSRNGKLELGLWFFHQMP--NPDT 254
Query: 452 VGCHVLLGNIYSSSGRWNDA 471
V + L+ + + SG +N+A
Sbjct: 255 VTYNELI-DAFVKSGDFNNA 273
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 131/465 (28%), Positives = 226/465 (48%), Gaps = 45/465 (9%)
Query: 70 LFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNG 129
+F + + D+ +NTMI A + ++V+ + + G + + A N
Sbjct: 375 VFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEM--QKQGFKIDYITVTALLSAASNL 432
Query: 130 LSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMI 189
+ + G+Q + ++ G+ + + LI MY K GL+ +K+FE
Sbjct: 433 RNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMYSKSGLIRISQKLFE-------------- 477
Query: 190 AAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEY 249
GSG E+D +W+++I+GY Q G + F +ML+ +PN
Sbjct: 478 ----GSG-----------YAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAV 522
Query: 250 TFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEH 309
T S L ACS + ++D GK +H F R + N + ++++DMY+K G I+ A +F +
Sbjct: 523 TVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQT 582
Query: 310 NAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEG 369
+ V + MI G+ HG AI +F M+ + P+ +TFVA+L+ACS+ +++EG
Sbjct: 583 KERNSV-TYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEG 641
Query: 370 KLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVA-IWGAVLNAC 428
F M Y I P EHY C+ D+L R G + EA + + + ++A +WG++L +C
Sbjct: 642 LKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSC 701
Query: 429 RIYKDMERGYRIGRIIKEMD--PNHVGCHVLLGNIYSSSGRWNDA----RMLREKSEIST 482
+++ ++E + + + D N G VLL N+Y+ +W R +REK
Sbjct: 702 KLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREK----- 756
Query: 483 ATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLK 527
KK G S IE+ G F+ D+ HP S E+Y +D + ++
Sbjct: 757 GLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGLAKDMR 801
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 107/469 (22%), Positives = 207/469 (44%), Gaps = 58/469 (12%)
Query: 9 TKPFHSDHCCRLASLVDTC---KSIQQIKQTHAQLVTTALISHHVSANKFLK-----LVA 60
T PF + +S + C K+++ K H L+ S V N + L A
Sbjct: 99 TAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNA 158
Query: 61 DASLSY--AHKLFDQIPQPDLFIYNTMIKAH---SLSPSSCNDSLMVFRLLTRDSGLSPN 115
Y K+FD + + ++ +NT+I + + +C ++ R+ + P+
Sbjct: 159 PDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVK-----PS 213
Query: 116 RYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFE 175
SFV F A S+++ N G+ K G EY
Sbjct: 214 PVSFVNVFPAVSISRSIKKA-------------------NVFYGLMLKLG-DEY------ 247
Query: 176 WAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDF 235
KDL+ ++ I+ Y G++ ++ +FD E+++ W+T+I YVQ C +E+++
Sbjct: 248 ---VKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIEL 304
Query: 236 FHRMLQVGPK---PNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDM 292
F + +G K +E T++ A +A S L ++ G+ H F+ + ++ ++ S++ M
Sbjct: 305 F--LEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVM 362
Query: 293 YAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVT 352
Y++CG + + VF +R V WN MI F +G E + + +M+ + + +T
Sbjct: 363 YSRCGSVHKSFGVFLSMR-ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYIT 421
Query: 353 FVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSM 412
ALL+A S+ E GK ++ + Y ++D+ S++GL++ ++ +
Sbjct: 422 VTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSY--LIDMYSKSGLIRISQKLFEGS 479
Query: 413 PMAP-DVAIWGAVLNACRIYKDMERGYRIGRIIKEMD--PNHVGCHVLL 458
A D A W ++++ E+ + + R + E + PN V +L
Sbjct: 480 GYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASIL 528
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 183/385 (47%), Gaps = 45/385 (11%)
Query: 53 NKFLKLVADASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGL 112
++ K+ D + A +LFD IP+P ++NT+I + + +++L+ + + + +
Sbjct: 44 SRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGF-ICNNLPHEALLFYSRMKKTAPF 102
Query: 113 SP-NRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMY----GKWGLV 167
+ + Y++ T AC +++ G+ V H ++ +S+ V N+L+ MY
Sbjct: 103 TNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCF 162
Query: 168 EYG--RKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQ 225
EY RKVF+ K++ +WNT+I SW YV+
Sbjct: 163 EYDVVRKVFDNMRRKNVVAWNTLI-------------------------SW------YVK 191
Query: 226 VGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGR--GEIKMNE 283
G EA F M+++ KP+ +FV+ A S ++ + + + + E +
Sbjct: 192 TGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDL 251
Query: 284 RLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVF-QKMK 342
+++S I MYA+ G+IES+ RVF + +R + WN MIG + + E+I++F + +
Sbjct: 252 FVVSSAISMYAELGDIESSRRVF-DSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIG 310
Query: 343 VENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLL 402
+ + ++VT++ +A S VE G+ + + ++ +P + MV + SR G +
Sbjct: 311 SKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMV-MYSRCGSV 369
Query: 403 KEAEDMISSMPMAPDVAIWGAVLNA 427
++ + SM DV W +++A
Sbjct: 370 HKSFGVFLSM-RERDVVSWNTMISA 393
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/387 (31%), Positives = 197/387 (50%), Gaps = 36/387 (9%)
Query: 239 MLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGE 298
+L G P+ FV +C+NL +L+ K +H + + + + +L +I M+ +C
Sbjct: 227 LLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSS 286
Query: 299 IESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLN 358
I A RVF +H + + W+ M+ ++ +G +A+ +F++M + PN+ TF+ +
Sbjct: 287 ITDAKRVF-DHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFL 345
Query: 359 ACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDV 418
AC+ +EE L+F M +++GI P+ EHY ++ +L + G L EAE I +P P
Sbjct: 346 ACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTA 405
Query: 419 AIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGR-WNDARMLREK 477
W A+ N R++ D++ + ++ ++DP+ ++ I + + + + M+ K
Sbjct: 406 DFWEAMRNYARLHGDIDLEDYMEELMVDVDPS----KAVINKIPTPPPKSFKETNMVTSK 461
Query: 478 SEISTATKKIPGCSSIEL-NGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVFG 536
S I +E N TFY+ D + EM K + YVP
Sbjct: 462 SRI------------LEFRNLTFYK----DEA-----------KEMAAKKGVV-YVPD-T 492
Query: 537 XXXXXXXXXXXXXTALSVHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKV 596
AL HSE+LAIA+G++ T P + I+KNLRVC DCH K +SK+
Sbjct: 493 RFVLHDIDQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKI 552
Query: 597 YDRVIIVRDRTRYHHFKDGICSCKDYW 623
RV+IVRD R+HHFKDG CSC DYW
Sbjct: 553 IGRVLIVRDNKRFHHFKDGKCSCGDYW 579
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 94/223 (42%), Gaps = 34/223 (15%)
Query: 109 DSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVE 168
D G P+R FV F +C N S++ ++V H ++ + + N +I M+G+ +
Sbjct: 229 DKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSIT 288
Query: 169 YGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGC 228
++VF+ VDKD+ SW+ M+ AY +G A LF+EM +
Sbjct: 289 DAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKH----------------- 331
Query: 229 FMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIH--SFIGRGEIKMNERLL 286
G KPNE TF++ AC+ + +++ ++H S I
Sbjct: 332 --------------GLKPNEETFLTVFLACATVGGIEEA-FLHFDSMKNEHGISPKTEHY 376
Query: 287 ASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHG 329
++ + KCG + A + + + W AM +HG
Sbjct: 377 LGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHG 419
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 147/485 (30%), Positives = 239/485 (49%), Gaps = 65/485 (13%)
Query: 20 LASLVDTCKSIQQIKQTHAQLVTTA---------LISHHVSANKFLKLVADASLSYAHKL 70
L+ L K++ Q KQ HAQLV LI H+ S K ++S AH L
Sbjct: 11 LSLLQQNSKTLIQAKQIHAQLVINGCHDNSLFGKLIGHYCS-----KPSTESSSKLAHLL 65
Query: 71 -FDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVF-RLLTRDSGLSPNRYSFVFTFGACGN 128
F + PD F++NT++K S DS+ +F ++ S L N +FVF GA
Sbjct: 66 VFPRFGHPDKFLFNTLLKC-----SKPEDSIRIFANYASKSSLLYLNERTFVFVLGA--- 117
Query: 129 GLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTM 188
S A++VG + GM K G + + +L T+
Sbjct: 118 -----CARSASSSALRVG--------RIVHGMVKKLGFL----------YESELIG-TTL 153
Query: 189 IAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVG-----CFMEALDFFHRM--LQ 241
+ Y +G++ A+++FDEM E+ V+W+ +I GY +A+ F R
Sbjct: 154 LHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCG 213
Query: 242 VGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEI--KMNERLLASIIDMYAKCGEI 299
G +P + T V L+A S L+ G +H +I + +++ + +++DMY+KCG +
Sbjct: 214 SGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCL 273
Query: 300 ESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNA 359
+A VF E + V+ W +M G A++G+ +E + +M + PN++TF +LL+A
Sbjct: 274 NNAFSVF-ELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSA 332
Query: 360 CSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVA 419
H +VEEG F+ M + +G+ P IEHYGC+VDLL +AG ++EA I +MP+ PD
Sbjct: 333 YRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAI 392
Query: 420 IWGAVLNACRIYKDMERGYRIGRIIKEM---DPNHVGC----HVLLGNIYSSSGRWNDAR 472
+ ++ NAC IY + G IG+ + E+ D G +V L N+ + G+W +
Sbjct: 393 LLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVEVE 452
Query: 473 MLREK 477
LR++
Sbjct: 453 KLRKE 457
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 196 bits (497), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 124/450 (27%), Positives = 219/450 (48%), Gaps = 38/450 (8%)
Query: 34 KQTHAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQ---IPQPDLFIYNTMIKAH 89
KQ H +V + L S + + + + ++ SL YA +F Q + ++N+M+
Sbjct: 258 KQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGF 317
Query: 90 SLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDS 149
++ N++ + L S L + Y+ C N ++++ G QV S V G +
Sbjct: 318 LINEE--NEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYEL 375
Query: 150 NVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQ 209
+ V + L+ ++ GN+ A +LF +
Sbjct: 376 DYIVGSILVDLHAN-------------------------------VGNIQDAHKLFHRLP 404
Query: 210 EQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKW 269
+D++++S +I G V+ G A F ++++G +++ + L CS+L +L GK
Sbjct: 405 NKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQ 464
Query: 270 IHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHG 329
IH + + +++DMY KCGEI++ V ++ +R V W +I GF +G
Sbjct: 465 IHGLCIKKGYESEPVTATALVDMYVKCGEIDNGV-VLFDGMLERDVVSWTGIIVGFGQNG 523
Query: 330 KPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHY 389
+ EA + F KM + PNKVTF+ LL+AC H ++EE + M S+YG+ P +EHY
Sbjct: 524 RVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHY 583
Query: 390 GCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDP 449
C+VDLL +AGL +EA ++I+ MP+ PD IW ++L AC +K+ I + + P
Sbjct: 584 YCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFP 643
Query: 450 NHVGCHVLLGNIYSSSGRWNDARMLREKSE 479
+ + L N Y++ G W+ +RE ++
Sbjct: 644 DDPSVYTSLSNAYATLGMWDQLSKVREAAK 673
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 198/411 (48%), Gaps = 16/411 (3%)
Query: 27 CKSIQQIKQ---THAQLVTTALISHHVSANKFLKLVADASL-SYAHKLFDQIPQPDLFIY 82
C +Q K+ A ++ + + AN + + D L S AHK+FD++ + ++ +
Sbjct: 15 CGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTW 74
Query: 83 NTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHA 142
TM+ ++ S N ++ ++R + + N + + ACG +Q G V
Sbjct: 75 TTMVSGYT-SDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERI 133
Query: 143 VKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAK 202
K L +V ++N+++ MY K G + F+ + SWNT+I+ Y +G M +A
Sbjct: 134 GKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAV 193
Query: 203 ELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLV 262
LF M + +VVSW+ +I+G+V G AL+F RM + G + + L ACS
Sbjct: 194 TLFHRMPQPNVVSWNCLISGFVDKGS-PRALEFLVRMQREGLVLDGFALPCGLKACSFGG 252
Query: 263 ALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHN--AKRKVWPWNA 320
L GK +H + + ++ + ++++IDMY+ CG + A+ VF + V WN+
Sbjct: 253 LLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNS 312
Query: 321 MIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEG-KLYFRLMVSD 379
M+ GF ++ + A+ + ++ ++ + T L C + + G +++ ++VS
Sbjct: 313 MLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSG 372
Query: 380 YGIIPEIEHY--GCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNAC 428
Y E+++ +VDL + G +++A + +P D+ + ++ C
Sbjct: 373 Y----ELDYIVGSILVDLHANVGNIQDAHKLFHRLP-NKDIIAFSGLIRGC 418
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 83/176 (47%), Gaps = 4/176 (2%)
Query: 253 SALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAK 312
+ L C + A +G+ I + + + I N + ++I MY + A +VF E ++
Sbjct: 10 AGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEM-SE 68
Query: 313 RKVWPWNAMIGGFAMHGKPSEAIKVFQKM-KVENVSPNKVTFVALLNACSHGYMVEEGKL 371
R + W M+ G+ GKP++AI+++++M E + N+ + A+L AC ++ G L
Sbjct: 69 RNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGIL 128
Query: 372 YFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNA 427
+ + + ++ +VD+ + G L EA + + P W +++
Sbjct: 129 VYE-RIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEI-LRPSSTSWNTLISG 182
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 192 bits (488), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 124/419 (29%), Positives = 212/419 (50%), Gaps = 38/419 (9%)
Query: 78 DLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQ 137
DL +N++I + S +SL F+ ++R+ + + + + T A GN V +G
Sbjct: 544 DLTSWNSVISGCASSGHHL-ESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRC 602
Query: 138 VRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGN 197
A+K + + + N LI MYG+ +E KVF D +L SWN +I+A
Sbjct: 603 FHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISA------ 656
Query: 198 MSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAA 257
+SQ K AG + F + +PNE TFV L+A
Sbjct: 657 LSQNK------------------AGR----------EVFQLFRNLKLEPNEITFVGLLSA 688
Query: 258 CSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWP 317
+ L + G H + R + N + A+++DMY+ CG +E+ +VF ++ +
Sbjct: 689 STQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVF-RNSGVNSISA 747
Query: 318 WNAMIGGFAMHGKPSEAIKVFQKMKVEN-VSPNKVTFVALLNACSHGYMVEEGKLYFRLM 376
WN++I HG +A+++F+++ + + PNK +F++LL+ACSH ++EG Y++ M
Sbjct: 748 WNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQM 807
Query: 377 VSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMER 436
+G+ P EH +VD+L RAG L+EA + I+ + +WGA+L+AC + D +
Sbjct: 808 EEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKL 867
Query: 437 GYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIEL 495
G + ++ EM+P++ ++ L N Y G W +A LR+ E A KK+PG S I++
Sbjct: 868 GKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVE-DNALKKLPGYSVIDV 925
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 124/288 (43%), Gaps = 45/288 (15%)
Query: 67 AHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGAC 126
A K+F I P+L +N +I A S + + VF+L R+ L PN +FV A
Sbjct: 635 AVKVFGLISDPNLCSWNCVISALSQNKAGRE----VFQLF-RNLKLEPNEITFVGLLSAS 689
Query: 127 GNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWN 186
S G Q H ++ G +N FV AL+ MY G++E G KVF + + +WN
Sbjct: 690 TQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWN 749
Query: 187 TMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKP 246
++I+A+ G +A ELF E+ + +P
Sbjct: 750 SVISAHGFHGMGEKAMELFKELSSNSEM------------------------------EP 779
Query: 247 NEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLAS----IIDMYAKCGEIESA 302
N+ +F+S L+ACS+ +D+G S+ + E K + + I+DM + G++ A
Sbjct: 780 NKSSFISLLSACSHSGFIDEGL---SYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREA 836
Query: 303 SRVFWEHNAKRKVWPWNAMIGGFAMHGKP---SEAIKVFQKMKVENVS 347
+K W A++ HG E +V +M+ +N S
Sbjct: 837 YEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNAS 884
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 130/273 (47%), Gaps = 9/273 (3%)
Query: 180 KDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRM 239
+DL + + ++ Y +G + + LFDE++E+DV+ W+++I Q G ++ A+ F M
Sbjct: 120 QDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEM 179
Query: 240 LQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEI 299
+ G + + T + A +A S+L + +H + + L +++++YAK +
Sbjct: 180 IHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENL 239
Query: 300 ESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNA 359
SA VF H R + WN ++ +G P ++++ F+ M + VTF +++A
Sbjct: 240 SSAECVF-THMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISA 298
Query: 360 CSHGYMVEEGKLYFRL--MVSDYGIIPE--IEHYGCMVDLLSRAGLLKEAEDMISSMPMA 415
CS +EE L L +V G PE + ++ + S+ G + AE + + +
Sbjct: 299 CSS---IEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEEL-VC 354
Query: 416 PDVAIWGAVLNACRIYKDMERGYRIGRIIKEMD 448
DV A+LN E + I ++ +D
Sbjct: 355 RDVISSNAILNGFAANGMFEEAFGILNQMQSVD 387
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 86/442 (19%), Positives = 185/442 (41%), Gaps = 68/442 (15%)
Query: 23 LVDTCKSIQQI---KQTHAQLVTTALISH-HVS-ANKFLKLVAD-ASLSYAHKLFDQIPQ 76
++ C SI+++ + H ++ + HVS N + + + A +F+++
Sbjct: 295 VISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVC 354
Query: 77 PDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGE 136
D+ N ++ + + ++ + + + P+ + V CG+ +EG
Sbjct: 355 RDVISSNAILNGFA-ANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGR 413
Query: 137 QVRSHAVKVGLDSNVF-VVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGS 195
V + V++ + S V+N++I MYGK GL
Sbjct: 414 AVHGYTVRMEMQSRALEVINSVIDMYGKCGLT---------------------------- 445
Query: 196 GNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQ--VGPKPNEYTFVS 253
+QA+ LF +D+VSW+++I+ + Q G +A + F ++ K + T ++
Sbjct: 446 ---TQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLA 502
Query: 254 ALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKR 313
L +C + +L GK +H ++ K G++ SA + R
Sbjct: 503 ILTSCDSSDSLIFGKSVHCWL-------------------QKLGDLTSAFLRLETMSETR 543
Query: 314 KVWPWNAMIGGFAMHGKPSEAIKVFQKMKVE-NVSPNKVTFVALLNACSHGYMVEEGKLY 372
+ WN++I G A G E+++ FQ M E + + +T + ++A + +V +G+ +
Sbjct: 544 DLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCF 603
Query: 373 FRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMA--PDVAIWGAVLNACRI 430
L + + E++ L++ G K+ E + + P++ W V++A
Sbjct: 604 HGLAIKS---LRELDTQ-LQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQ 659
Query: 431 YKDMERGYRIGRIIKEMDPNHV 452
K +++ R +K ++PN +
Sbjct: 660 NKAGREVFQLFRNLK-LEPNEI 680
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 14/366 (3%)
Query: 258 CSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWP 317
C L + K +H I ++ +++MY+ CG A+ VF E +++ +
Sbjct: 264 CGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVF-EKMSEKNLET 322
Query: 318 WNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMV 377
W +I FA +G +AI +F + K E P+ F + AC V+EG L+F M
Sbjct: 323 WCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMS 382
Query: 378 SDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERG 437
DYGI P IE Y +V++ + G L EA + + MPM P+V +W ++N R++ ++E G
Sbjct: 383 RDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELG 442
Query: 438 YRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNG 497
+++ +DP + G I + EK + + + G S
Sbjct: 443 DYCAEVVEFLDPTRLNKQSREGFIPVKASDV-------EKESLKKRSGILHGVKS----- 490
Query: 498 TFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVFGXXXXXXXXXXXXXTALSVHSE 557
+ +F GD + P++ EL+ L + + GYV T L HSE
Sbjct: 491 SMQEFRAGDTNLPENDELFQLLRNLKMHMVEVGYVAE-TRMALHDIDQESKETLLLGHSE 549
Query: 558 KLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRVIIVRDRTRYHHFKDGIC 617
++A A +LN+AP P ++KNLRVC DCH K +S + R +I RD R+H K+G C
Sbjct: 550 RIAFARAVLNSAPRKPFTVIKNLRVCVDCHNALKIMSDIVGREVITRDIKRFHQMKNGAC 609
Query: 618 SCKDYW 623
+CKDYW
Sbjct: 610 TCKDYW 615
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 68/150 (45%), Gaps = 1/150 (0%)
Query: 181 DLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRML 240
DL S + ++ Y G ++A +F++M E+++ +W II + + G +A+D F R
Sbjct: 288 DLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFK 347
Query: 241 QVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRG-EIKMNERLLASIIDMYAKCGEI 299
+ G P+ F AC L +D+G + R I + S+++MYA G +
Sbjct: 348 EEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFL 407
Query: 300 ESASRVFWEHNAKRKVWPWNAMIGGFAMHG 329
+ A + V W ++ +HG
Sbjct: 408 DEALEFVERMPMEPNVDVWETLMNLSRVHG 437
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 139/482 (28%), Positives = 248/482 (51%), Gaps = 44/482 (9%)
Query: 21 ASLVDTCKSIQQIK---QTHAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIPQ 76
S++ +CK + +K Q H + + + + L L A + A FD + +
Sbjct: 117 GSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKE 176
Query: 77 PDLFIYNTMIKAHSLSPSSCND-SLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEG 135
DL +N MI ++ ++C D S +F+L+ + G P+ FTFG+
Sbjct: 177 RDLVSWNAMIDGYT--ANACADTSFSLFQLMLTE-GKKPD----CFTFGSL--------- 220
Query: 136 EQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGS 195
+R+ V L+ +V+ L G+ K G +GR A+ + L + AYV
Sbjct: 221 --LRASIVVKCLE----IVSELHGLAIKLG---FGRSS---ALIRSL------VNAYVKC 262
Query: 196 GNMSQAKELFDEMQEQDVVSWSTIIAGYVQVG-CFMEALDFFHRMLQVGPKPNEYTFVSA 254
G+++ A +L + +++D++S + +I G+ Q C +A D F M+++ K +E S
Sbjct: 263 GSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSM 322
Query: 255 LAACSNLVALDQGKWIHSF-IGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKR 313
L C+ + ++ G+ IH F + +I+ + L S+IDMYAK GEIE A F E ++
Sbjct: 323 LKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAF-EEMKEK 381
Query: 314 KVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYF 373
V W ++I G+ HG +AI ++ +M+ E + PN VTF++LL+ACSH E G +
Sbjct: 382 DVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIY 441
Query: 374 RLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMP--MAPDVAIWGAVLNACRIY 431
M++ +GI EH C++D+L+R+G L+EA +I S ++ + WGA L+ACR +
Sbjct: 442 DTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRH 501
Query: 432 KDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCS 491
+++ + M+P ++ L ++Y+++G W++A R+ + S + K PG S
Sbjct: 502 GNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCNKAPGYS 561
Query: 492 SI 493
+
Sbjct: 562 LV 563
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 100/174 (57%), Gaps = 1/174 (0%)
Query: 186 NTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPK 245
+ +I Y+ G++ A++LFD + ++DVVSW+ +I+ + + G +AL F M + K
Sbjct: 51 DMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVK 110
Query: 246 PNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRV 305
N++T+ S L +C +L L +G IH + +G N + ++++ +YA+CG++E A R+
Sbjct: 111 ANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEA-RL 169
Query: 306 FWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNA 359
++ +R + WNAMI G+ + + +FQ M E P+ TF +LL A
Sbjct: 170 QFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRA 223
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 172/405 (42%), Gaps = 53/405 (13%)
Query: 31 QQIKQTHAQLVTTALISHHVSANKFLKL-VADASLSYAHKLFDQIPQPDLFIYNTMIKAH 89
+Q+ H +T S+ + + L + + +A KLFD+I + D+ + MI
Sbjct: 29 KQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRF 88
Query: 90 SLSPSSCN---DSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVG 146
S C D+L++F+ + R+ + N++++ +C + ++EG Q+ K
Sbjct: 89 S----RCGYHPDALLLFKEMHRED-VKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGN 143
Query: 147 LDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFD 206
N+ V +AL+ +Y + G +E R F+ ++DL SWN M
Sbjct: 144 CAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAM------------------ 185
Query: 207 EMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAA-----CSNL 261
I GY C + F ML G KP+ +TF S L A C +
Sbjct: 186 -------------IDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEI 232
Query: 262 VALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAM 321
V+ G I GR + L+ S+++ Y KCG + +A ++ E KR + A+
Sbjct: 233 VSELHGLAIKLGFGR-----SSALIRSLVNAYVKCGSLANAWKLH-EGTKKRDLLSCTAL 286
Query: 322 IGGFAMHGK-PSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDY 380
I GF+ S+A +F+ M ++V ++L C+ V G+ +
Sbjct: 287 ITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSS 346
Query: 381 GIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVL 425
I ++ ++D+ +++G +++A M DV W +++
Sbjct: 347 QIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMK-EKDVRSWTSLI 390
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 86/183 (46%), Gaps = 8/183 (4%)
Query: 251 FVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHN 310
++ AL CS Q IH N +L +ID+Y K G+++ A ++F +
Sbjct: 15 YLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLF-DRI 73
Query: 311 AKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGK 370
+KR V W AMI F+ G +A+ +F++M E+V N+ T+ ++L +C ++EG
Sbjct: 74 SKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEG- 132
Query: 371 LYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVL----- 425
+ V + ++ L +R G ++EA SM D+ W A++
Sbjct: 133 MQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMK-ERDLVSWNAMIDGYTA 191
Query: 426 NAC 428
NAC
Sbjct: 192 NAC 194
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 114/340 (33%), Positives = 191/340 (56%), Gaps = 21/340 (6%)
Query: 64 LSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTF 123
L A K FD++P+ + +N M+ ++ + + D+L +F + R G+ PN ++V
Sbjct: 214 LENARKYFDRMPEKSVVSWNAMLSGYAQNGFT-EDALRLFNDMLR-LGVRPNETTWVIVI 271
Query: 124 GACGNGLSVQEGEQVRSHAVKVGLDS-----NVFVVNALIGMYGKWGLVEYGRKVF-EWA 177
AC S + + VK+ +D N FV AL+ M+ K ++ R++F E
Sbjct: 272 SAC----SFRADPSLTRSLVKL-IDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELG 326
Query: 178 VDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFH 237
++L +WN MI+ Y G+MS A++LFD M +++VVSW+++IAGY G A++FF
Sbjct: 327 TQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFE 386
Query: 238 RMLQVG-PKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKC 296
M+ G KP+E T +S L+AC ++ L+ G I +I + +IK+N+ S+I MYA+
Sbjct: 387 DMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARG 446
Query: 297 GEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVAL 356
G + A RVF E +R V +N + FA +G E + + KMK E + P++VT+ ++
Sbjct: 447 GNLWEAKRVFDEMK-ERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSV 505
Query: 357 LNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLL 396
L AC+ +++EG+ F+ + + P +HY CM DLL
Sbjct: 506 LTACNRAGLLKEGQRIFKSIRN-----PLADHYACM-DLL 539
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 138/545 (25%), Positives = 231/545 (42%), Gaps = 120/545 (22%)
Query: 20 LASLVDTCKSIQQIKQTHAQLVT-TALISHHVSANKFLKLVAD--ASLSYAHKLFDQIPQ 76
LA++ + Q+ Q HAQL+ +L A++ + A Y +FD +
Sbjct: 9 LAAIASQALTFPQLNQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTF 68
Query: 77 PDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGE 136
P++F+ N+M K S ND L ++ +R G+ P+ +SF + G + G
Sbjct: 69 PNVFVVNSMFKYFS-KMDMANDVLRLYEQRSR-CGIMPDAFSFPVVIKSAG-----RFGI 121
Query: 137 QVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFE---------WAV--------- 178
++ K+G + +V N ++ MY K VE RKVF+ W V
Sbjct: 122 LFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWG 181
Query: 179 -------------DKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQ 225
+ D+ SW MI + ++ A++ FD M E+ VVSW+ +++GY Q
Sbjct: 182 NKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQ 241
Query: 226 VGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERL 285
G +AL F+ ML++G +PNE T+V ++ACS + + I +++N +
Sbjct: 242 NGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFV 301
Query: 286 LASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVEN 345
+++DM+AKC +I+SA R+F E +R + WNAMI G+ G S A ++F M N
Sbjct: 302 KTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRN 361
Query: 346 V--------------------------------SPNKVTFVALLNACSHGYMVEEGKL-- 371
V P++VT +++L+AC H +E G
Sbjct: 362 VVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIV 421
Query: 372 -YFR---LMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMP-------------- 413
Y R + ++D G Y ++ + +R G L EA+ + M
Sbjct: 422 DYIRKNQIKLNDSG-------YRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAF 474
Query: 414 --------------------MAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVG 453
+ PD + +VL AC ++ G RI + I+ +H
Sbjct: 475 AANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRNPLADHYA 534
Query: 454 CHVLL 458
C LL
Sbjct: 535 CMDLL 539
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 118/366 (32%), Positives = 180/366 (49%), Gaps = 19/366 (5%)
Query: 258 CSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWP 317
C + AL + K +H FI + SII+MY+ CG +E A VF +R +
Sbjct: 191 CGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVF-NSMPERNLET 249
Query: 318 WNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMV 377
W +I FA +G+ +AI F + K E P+ F + AC + EG L+F M
Sbjct: 250 WCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMY 309
Query: 378 SDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERG 437
+YGIIP +EHY +V +L+ G L EA + SM P+V +W ++N R++ D+ G
Sbjct: 310 KEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESM--EPNVDLWETLMNLSRVHGDLILG 367
Query: 438 YRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELNG 497
R +++++D + + G + S + +++EK + K P N
Sbjct: 368 DRCQDMVEQLDASRLNKESKAGLVPVKS-----SDLVKEKLQ---RMAKGP-------NY 412
Query: 498 TFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVFGXXXXXXXXXXXXXTALSVHSE 557
GD S P++RELY L + + GYVP+ L H+E
Sbjct: 413 GIRYMAAGDISRPENRELYMALKSLKEHMIEIGYVPL-SKLALHDVDQESKDENLFNHNE 471
Query: 558 KLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRVIIVRDRTRYHHFKDGIC 617
+ A L+T + IR++KNLRVC DCH K +SK+ R +I RD R+HH KDG+C
Sbjct: 472 RFAFISTFLDTPARSLIRVMKNLRVCADCHNALKLMSKIVGRELISRDAKRFHHMKDGVC 531
Query: 618 SCKDYW 623
SC++YW
Sbjct: 532 SCREYW 537
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 181 DLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRML 240
D+ ++N++I Y G G++ A +F+ M E+++ +W +I + + G +A+D F R
Sbjct: 215 DISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFK 274
Query: 241 QVGPKPNEYTFVSALAACSNLVALDQG--KWIHSFIGRGEIKMNERLLASIIDMYAKCGE 298
Q G KP+ F AC L +++G + + G I E + S++ M A+ G
Sbjct: 275 QEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYV-SLVKMLAEPGY 333
Query: 299 IESASRVFWEHNAKRKVW 316
++ A R +W
Sbjct: 334 LDEALRFVESMEPNVDLW 351
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 116/367 (31%), Positives = 184/367 (50%), Gaps = 36/367 (9%)
Query: 67 AHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGAC 126
A +LFD +P+ ++ +N M+ + + D + F L R + + + V+ C
Sbjct: 348 ARELFDLMPERNIVSWNAMLGGYVHAHEW--DEALDFLTLMRQEIENIDNVTLVWILNVC 405
Query: 127 GNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWN 186
VQ G+Q + G D+NV V NAL+ MYGK
Sbjct: 406 SGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGK----------------------- 442
Query: 187 TMIAAYVGSGNMSQAKELFDEMQE-QDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPK 245
G + A F +M E +D VSW+ ++ G +VG +AL FF M QV K
Sbjct: 443 --------CGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGM-QVEAK 493
Query: 246 PNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRV 305
P++YT + LA C+N+ AL+ GK IH F+ R K++ + +++DMY+KC + A V
Sbjct: 494 PSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEV 553
Query: 306 FWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYM 365
F E A R + WN++I G +G+ E ++F ++ E V P+ VTF+ +L AC
Sbjct: 554 FKE-AATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGH 612
Query: 366 VEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVL 425
VE G YF M + Y I P++EHY CM++L + G L + E+ + MP P + + +
Sbjct: 613 VELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRIN 672
Query: 426 NACRIYK 432
+AC+ Y+
Sbjct: 673 DACQRYR 679
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 106/365 (29%), Positives = 186/365 (50%), Gaps = 5/365 (1%)
Query: 64 LSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTF 123
+S A ++FD+I P +N +++ + + +M F++L + + P ++
Sbjct: 213 MSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKML--ELNVRPLNHTVSSVM 270
Query: 124 GACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLY 183
AC L+++ G+ + + AVK+ + ++ V ++ MY K +E R+VF+ KDL
Sbjct: 271 LACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLK 330
Query: 184 SWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVG 243
SW + ++ Y SG +A+ELFD M E+++VSW+ ++ GYV + EALDF M Q
Sbjct: 331 SWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEI 390
Query: 244 PKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESAS 303
+ T V L CS + + GK H FI R N + +++DMY KCG ++SA+
Sbjct: 391 ENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSAN 450
Query: 304 RVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHG 363
F + + R WNA++ G A G+ +A+ F+ M+VE P+K T LL C++
Sbjct: 451 IWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVE-AKPSKYTLATLLAGCANI 509
Query: 364 YMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGA 423
+ GK ++ D G ++ G MVD+ S+ A ++ D+ +W +
Sbjct: 510 PALNLGKAIHGFLIRD-GYKIDVVIRGAMVDMYSKCRCFDYAIEVFKE-AATRDLILWNS 567
Query: 424 VLNAC 428
++ C
Sbjct: 568 IIRGC 572
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/440 (24%), Positives = 186/440 (42%), Gaps = 69/440 (15%)
Query: 18 CRLASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVADASLSYAHKLFDQIPQP 77
C +LV + +Q T + L L++ + A V DA +LF+++P+
Sbjct: 71 CSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDA-----RELFEEMPER 125
Query: 78 DLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQ 137
D +N +I A + + S ++ +FR + RD G+ SF +CG L ++ Q
Sbjct: 126 DGGSWNAVITACAQNGVS-DEVFRMFRRMNRD-GVRATETSFAGVLKSCGLILDLRLLRQ 183
Query: 138 VRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGN 197
+ VK G NV + +++ +YGK ++ R+VF+ V+ SWN ++ Y+ G
Sbjct: 184 LHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMG- 242
Query: 198 MSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAA 257
F++ EA+ F +ML++ +P +T S + A
Sbjct: 243 -------FND-----------------------EAVVMFFKMLELNVRPLNHTVSSVMLA 272
Query: 258 CSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAK----- 312
CS +AL+ GK IH+ + + + + S+ DMY KC +ESA RVF + +K
Sbjct: 273 CSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSW 332
Query: 313 -------------------------RKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVS 347
R + WNAM+GG+ + EA+ M+ E +
Sbjct: 333 TSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIEN 392
Query: 348 PNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAED 407
+ VT V +LN CS V+ GK + +G + ++D+ + G L+ A
Sbjct: 393 IDNVTLVWILNVCSGISDVQMGKQAHGF-IYRHGYDTNVIVANALLDMYGKCGTLQSANI 451
Query: 408 MISSMPMAPDVAIWGAVLNA 427
M D W A+L
Sbjct: 452 WFRQMSELRDEVSWNALLTG 471
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 108/249 (43%), Gaps = 32/249 (12%)
Query: 123 FGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDL 182
F +C + V + +V+SH V +F++N I YGK G V+
Sbjct: 68 FRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVD-------------- 113
Query: 183 YSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQV 242
A+ELF+EM E+D SW+ +I Q G E F RM +
Sbjct: 114 -----------------DARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRD 156
Query: 243 GPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESA 302
G + E +F L +C ++ L + +H + + N L SI+D+Y KC + A
Sbjct: 157 GVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDA 216
Query: 303 SRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSH 362
RVF E V WN ++ + G EA+ +F KM NV P T +++ ACS
Sbjct: 217 RRVFDEIVNPSDV-SWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSR 275
Query: 363 GYMVEEGKL 371
+E GK+
Sbjct: 276 SLALEVGKV 284
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 137/458 (29%), Positives = 221/458 (48%), Gaps = 64/458 (13%)
Query: 42 TTALISHHVSANKFLKLVADASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLM 101
TA+IS + +F S A K F+++P D +N + + ++ N +
Sbjct: 439 ATAVISMYAKCGRF---------SPALKAFERLPIKDAVAFNALAQGYT-QIGDANKAFD 488
Query: 102 VFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMY 161
V++ + + G+ P+ + V C G V +K G DS V +ALI M+
Sbjct: 489 VYKNM-KLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMF 547
Query: 162 GKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQ-EQDVVSWSTII 220
K + + AA V LFD+ E+ VSW+ ++
Sbjct: 548 TKC---------------------DALAAAIV----------LFDKCGFEKSTVSWNIMM 576
Query: 221 AGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIK 280
GY+ G EA+ F +M +PN TFV+ + A + L AL G +HS + +
Sbjct: 577 NGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFC 636
Query: 281 MNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQK 340
+ S++DMYAKCG IES+ + F E + K V WN M+ +A HG S A+ +F
Sbjct: 637 SQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIV-SWNTMLSAYAAHGLASCAVSLFLS 695
Query: 341 MKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAG 400
M+ + P+ V+F+++L+AC H +VEEGK F M + I E+EHY CMVDLL +AG
Sbjct: 696 MQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAG 755
Query: 401 LLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDM-ERGYRIGRIIK--EMDPNHVGCHVL 457
L EA +M+ M + V +WGA+LN+ R++ ++ + +++K ++P+H
Sbjct: 756 LFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSH------ 809
Query: 458 LGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIEL 495
++ R L E + +S KK+P CS IE+
Sbjct: 810 ----------YSQDRRLGEVNNVSR-IKKVPACSWIEV 836
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 200/429 (46%), Gaps = 60/429 (13%)
Query: 23 LVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVADASLSYAHKLFDQIPQPDLFIY 82
++ CK+ + + Q H L+ + L H+ N + L LS +FD + P + ++
Sbjct: 11 MLRECKNFRCLLQVHGSLIVSGLKPHNQLINAY-SLFQRQDLSRV--IFDSVRDPGVVLW 67
Query: 83 NTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHA 142
N+MI+ ++ + ++L F ++ + G+ P++YSF F AC + ++G ++
Sbjct: 68 NSMIRGYTRAGLH-REALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLI 126
Query: 143 VKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAK 202
++GL+S+V++ AL+ MY K +DL S A+
Sbjct: 127 AEMGLESDVYIGTALVEMYCK---------------ARDLVS----------------AR 155
Query: 203 ELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLV 262
++FD+M +DVV+W+T+++G Q GC AL FH M + + + + A S L
Sbjct: 156 QVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLE 215
Query: 263 ALDQGKWIHSF-IGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAM 321
D + +H I +G I + +IDMY C ++ +A VF E ++ W M
Sbjct: 216 KSDVCRCLHGLVIKKGFIF---AFSSGLIDMYCNCADLYAAESVF-EEVWRKDESSWGTM 271
Query: 322 IGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDY- 380
+ +A +G E +++F M+ +V NKV + L A ++ G L + + DY
Sbjct: 272 MAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAY-----VGDLVKGIAIHDYA 326
Query: 381 ---GIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVL----------NA 427
G+I ++ ++ + S+ G L+ AE + ++ DV W A++ A
Sbjct: 327 VQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIE-DRDVVSWSAMIASYEQAGQHDEA 385
Query: 428 CRIYKDMER 436
+++DM R
Sbjct: 386 ISLFRDMMR 394
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 169/393 (43%), Gaps = 37/393 (9%)
Query: 62 ASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVF 121
A L A +F+++ + D + TM+ A++ + L +F L+ R+ + N+ +
Sbjct: 248 ADLYAAESVFEEVWRKDESSWGTMMAAYA-HNGFFEEVLELFDLM-RNYDVRMNKVAAAS 305
Query: 122 TFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKD 181
A + +G + +AV+ GL +V V +L+ MY K G +E
Sbjct: 306 ALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEI------------ 353
Query: 182 LYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQ 241
A++LF ++++DVVSWS +IA Y Q G EA+ F M++
Sbjct: 354 -------------------AEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMR 394
Query: 242 VGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIES 301
+ KPN T S L C+ + A GK IH + + +I+ ++I MYAKCG
Sbjct: 395 IHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSP 454
Query: 302 ASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACS 361
A + F K V +NA+ G+ G ++A V++ MK+ V P+ T V +L C+
Sbjct: 455 ALKAFERLPIKDAV-AFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCA 513
Query: 362 HGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIW 421
G + ++ +G E ++++ ++ L A + W
Sbjct: 514 FCSDYARGSCVYGQIIK-HGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSW 572
Query: 422 GAVLNACRIYKDMERGYRIGRIIK--EMDPNHV 452
++N ++ E R +K + PN V
Sbjct: 573 NIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAV 605
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/488 (20%), Positives = 197/488 (40%), Gaps = 77/488 (15%)
Query: 37 HAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSS 95
H V LI A + + + L A +LF I D+ ++ MI ++ +
Sbjct: 323 HDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQH 382
Query: 96 CNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVN 155
++++ +FR + R + PN + C + + G+ + +A+K ++S +
Sbjct: 383 -DEAISLFRDMMRIH-IKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETAT 440
Query: 156 ALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVS 215
A+I MY K G S A + F+ + +D V+
Sbjct: 441 AVISMYAK-------------------------------CGRFSPALKAFERLPIKDAVA 469
Query: 216 WSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIG 275
++ + GY Q+G +A D + M G P+ T V L C+ +G ++ I
Sbjct: 470 FNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQII 529
Query: 276 RGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAI 335
+ + ++I+M+ KC + +A +F + ++ WN M+ G+ +HG+ EA+
Sbjct: 530 KHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAV 589
Query: 336 KVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDL 395
F++MKVE PN VTFV ++ A + + G ++ G + +VD+
Sbjct: 590 ATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLI-QCGFCSQTPVGNSLVDM 648
Query: 396 LSRAGLLKEAED---------------MISSMP-------------------MAPDVAIW 421
++ G+++ +E M+S+ + PD +
Sbjct: 649 YAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSF 708
Query: 422 GAVLNACRIYKDMERGYRI-----GRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLRE 476
+VL+ACR +E G RI R E + H C V ++ +G + +A +
Sbjct: 709 LSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMV---DLLGKAGLFGEAVEMMR 765
Query: 477 KSEISTAT 484
+ + T+
Sbjct: 766 RMRVKTSV 773
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 115/233 (49%), Gaps = 4/233 (1%)
Query: 188 MIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPN 247
+I Y ++ A+ +F+E+ +D SW T++A Y G F E L+ F M + N
Sbjct: 240 LIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMN 299
Query: 248 EYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFW 307
+ SAL A + + L +G IH + + + + + S++ MY+KCGE+E A ++F
Sbjct: 300 KVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFI 359
Query: 308 EHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVE 367
+ R V W+AMI + G+ EAI +F+ M ++ PN VT ++L C+
Sbjct: 360 -NIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASR 418
Query: 368 EGK-LYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVA 419
GK ++ + +D I E+E ++ + ++ G A +P+ VA
Sbjct: 419 LGKSIHCYAIKAD--IESELETATAVISMYAKCGRFSPALKAFERLPIKDAVA 469
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 132/488 (27%), Positives = 232/488 (47%), Gaps = 44/488 (9%)
Query: 9 TKPFHSDHCCRLASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVADASLSY-A 67
T+P + + C LA + ++ H + + L + + +K + A L A
Sbjct: 102 TRPDNFTYAC-LARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEA 160
Query: 68 HKLFDQIPQPDLFIYNTMIKAHSLSPSSC---NDSLMVFRLLTRDSGLSPNRYSFVFTFG 124
KLF IP PDL ++N MI L C + + +F L+ + G PN Y+ V
Sbjct: 161 SKLFCSIPDPDLALWNVMI----LGYGCCGFWDKGINLFNLM-QHRGHQPNCYTMVALTS 215
Query: 125 ACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYS 184
+ + V + +K+ LDS+ +V AL+ MY + +
Sbjct: 216 GLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCI----------------- 258
Query: 185 WNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGP 244
+ A +F+ + E D+V+ S++I GY + G EAL F + G
Sbjct: 259 --------------ASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGK 304
Query: 245 KPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASR 304
KP+ L +C+ L GK +HS++ R ++++ ++ +++IDMY+KCG ++ A
Sbjct: 305 KPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMS 364
Query: 305 VFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGY 364
+F ++ + +N++I G +HG S A + F ++ + P+++TF ALL C H
Sbjct: 365 LF-AGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSG 423
Query: 365 MVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAV 424
++ +G+ F M S++GI P+ EHY MV L+ AG L+EA + + S+ D I GA+
Sbjct: 424 LLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGAL 483
Query: 425 LNACRIYKDMERGYRIGRII-KEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTA 483
L+ C ++++ + I K + V+L N+Y+ GRW++ LR+ S
Sbjct: 484 LSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYG 543
Query: 484 TKKIPGCS 491
K+PG S
Sbjct: 544 -GKLPGIS 550
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 117/294 (39%), Gaps = 34/294 (11%)
Query: 180 KDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRM 239
+D Y + Y + ++ A++LFD E+ V W++II Y + F L F ++
Sbjct: 38 RDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQI 97
Query: 240 LQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEI 299
L+ +P+ +T+ S + IH + ++ ++I+ Y+K G I
Sbjct: 98 LRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLI 157
Query: 300 ESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVAL--- 356
AS++F + WN MI G+ G + I +F M+ PN T VAL
Sbjct: 158 VEASKLFCS-IPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSG 216
Query: 357 -------------------LNACSHGYM-VEEGKLYFRLM-----VSDYGIIPEIEHYGC 391
+N SH Y+ +Y R M S + I E + C
Sbjct: 217 LIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVAC 276
Query: 392 --MVDLLSRAGLLKEAEDMISSMPMA---PDVAIWGAVLNACRIYKDMERGYRI 440
++ SR G KEA + + + M+ PD + VL +C D G +
Sbjct: 277 SSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEV 330
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 75/167 (44%), Gaps = 25/167 (14%)
Query: 270 IHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHG 329
+HSF+ + ++ + + YA ++ SA ++F + +R V+ WN++I +A
Sbjct: 27 LHSFVTKSKLARDPYFATQLARFYALNDDLISARKLF-DVFPERSVFLWNSIIRAYAKAH 85
Query: 330 KPSEAIKVFQKMKVENVSPNKVTFVALLNA-----------CSHGYMVEEGKLYFRLMVS 378
+ + + +F ++ + P+ T+ L C HG + G + ++ S
Sbjct: 86 QFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGS 145
Query: 379 DYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVL 425
+V S+AGL+ EA + S+P PD+A+W ++
Sbjct: 146 ------------AIVKAYSKAGLIVEASKLFCSIP-DPDLALWNVMI 179
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 179 bits (454), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 182/347 (52%), Gaps = 10/347 (2%)
Query: 186 NTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPK 245
+++I AY + A + D M +DVVS ST+I+G G EA+ F M
Sbjct: 367 SSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT--- 423
Query: 246 PNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNE-RLLASIIDMYAKCGEIESASR 304
PN T +S L ACS L KW H R + +N+ + SI+D YAKCG IE A R
Sbjct: 424 PNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARR 483
Query: 305 VFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGY 364
F + ++ + W +I +A++G P +A+ +F +MK + +PN VT++A L+AC+HG
Sbjct: 484 TF-DQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGG 542
Query: 365 MVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMP--MAPDVAIWG 422
+V++G + F+ MV + P ++HY C+VD+LSRAG + A ++I ++P + + WG
Sbjct: 543 LVKKGLMIFKSMVEE-DHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWG 601
Query: 423 AVLNACR-IYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEIS 481
A+L+ CR +K + + + E++P ++L + +++ W D M+R +
Sbjct: 602 AILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVK-E 660
Query: 482 TATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKI 528
+ + G S + +FL GD+ EL + + +K+
Sbjct: 661 RKVRVVAGYSMVREGNLAKRFLAGDKLSQSDSELNDVVQSLHRCMKL 707
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 181/410 (44%), Gaps = 39/410 (9%)
Query: 20 LASLVDTCKSIQ-QIKQTHAQLVTTALISHHVSANKFLKLVADASLSYAHKLFDQIPQPD 78
L ++ C+S+ ++ H ++ + N L + AD+ A KLFD++ + D
Sbjct: 130 LVLVIHACRSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLSARKLFDEMSERD 189
Query: 79 LFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQV 138
+ ++ +I+++ S L +F+ + ++ P+ + AC + G V
Sbjct: 190 VISWSVVIRSYVQSKEPVV-GLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSV 248
Query: 139 RSHAVKVGLD-SNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGN 197
+++ G D ++VFV N+LI M Y +
Sbjct: 249 HGFSIRRGFDLADVFVCNSLIDM-------------------------------YSKGFD 277
Query: 198 MSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAA 257
+ A +FDE +++VSW++I+AG+V + EAL+ FH M+Q + +E T VS L
Sbjct: 278 VDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRV 337
Query: 258 CSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWP 317
C K IH I R + NE L+S+ID Y C ++ A V + + V
Sbjct: 338 CKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVL-DSMTYKDVVS 396
Query: 318 WNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMV 377
+ MI G A G+ EAI +F M+ +PN +T ++LLNACS + K + +
Sbjct: 397 CSTMISGLAHAGRSDEAISIFCHMR---DTPNAITVISLLNACSVSADLRTSKWAHGIAI 453
Query: 378 SDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNA 427
I +I +VD ++ G ++ A + ++ W +++A
Sbjct: 454 RRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQIT-EKNIISWTVIISA 502
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 131/311 (42%), Gaps = 41/311 (13%)
Query: 20 LASLVDTCKSIQQ---IKQTHAQLVTTALISHHVSANKFLKLVADASL-SYAHKLFDQIP 75
+ SL+ CK +Q K H ++ S+ V+ + + SL A + D +
Sbjct: 331 VVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMT 390
Query: 76 QPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEG 135
D+ +TMI L+ + +D + RD+ PN + + AC ++
Sbjct: 391 YKDVVSCSTMISG--LAHAGRSDEAISIFCHMRDT---PNAITVISLLNACSVSADLRTS 445
Query: 136 EQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGS 195
+ A++ L N D+ +++ AY
Sbjct: 446 KWAHGIAIRRSLAIN------------------------------DISVGTSIVDAYAKC 475
Query: 196 GNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSAL 255
G + A+ FD++ E++++SW+ II+ Y G +AL F M Q G PN T+++AL
Sbjct: 476 GAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAAL 535
Query: 256 AACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVF--WEHNAKR 313
+AC++ + +G I + + K + + + I+DM ++ GEI++A + + K
Sbjct: 536 SACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKA 595
Query: 314 KVWPWNAMIGG 324
W A++ G
Sbjct: 596 GASAWGAILSG 606
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 16/200 (8%)
Query: 182 LYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQ 241
L+ N++ Y+ G++ FD M +D VSW+ I+ G + G E L +F ++
Sbjct: 61 LFQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRV 120
Query: 242 VGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIES 301
G +PN T V + AC +L G+ IH ++ R + SI+ MYA +
Sbjct: 121 WGFEPNTSTLVLVIHACRSL--WFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSL-- 176
Query: 302 ASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVE-NVSPNKVTFVALLNAC 360
++R ++ ++R V W+ +I + +P +K+F++M E P+ VT ++L AC
Sbjct: 177 SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKAC 236
Query: 361 S-----------HGYMVEEG 369
+ HG+ + G
Sbjct: 237 TVMEDIDVGRSVHGFSIRRG 256
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 127/456 (27%), Positives = 217/456 (47%), Gaps = 55/456 (12%)
Query: 34 KQTHAQLVTTALISHHVSANKFLKLVADASLSYAH-----KLFDQIPQPDLFIYNTMIKA 88
+Q HA ++ + +S + + + Y H ++F+ + + DL +N ++
Sbjct: 104 RQVHALMIKQGAETGTISKTALIDMYS----KYGHLVDSVRVFESVEEKDLVSWNALLSG 159
Query: 89 HSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLD 148
L ++L VF + R+ + + ++ C + +Q+G+QV + V G D
Sbjct: 160 F-LRNGKGKEALGVFAAMYRER-VEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRD 217
Query: 149 SNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEM 208
V + A+I Y GL+ KV+ S N
Sbjct: 218 L-VVLGTAMISFYSSVGLINEAMKVYN--------SLNV--------------------- 247
Query: 209 QEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGK 268
D V +++I+G ++ + EA R +PN S+LA CS+ L GK
Sbjct: 248 -HTDEVMLNSLISGCIRNRNYKEAFLLMSR-----QRPNVRVLSSSLAGCSDNSDLWIGK 301
Query: 269 WIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMH 328
IH R + +L ++DMY KCG+I A +F +K V W +MI +A++
Sbjct: 302 QIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSK-SVVSWTSMIDAYAVN 360
Query: 329 GKPSEAIKVFQKMKVEN--VSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEI 386
G +A+++F++M E V PN VTF+ +++AC+H +V+EGK F +M Y ++P
Sbjct: 361 GDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGT 420
Query: 387 EHYGCMVDLLSRAGLLKE----AEDMISSMPMAPDVAIWGAVLNACRIYKDMERG-YRIG 441
EHY C +D+LS+AG +E E M+ + + AIW AVL+AC + D+ RG Y
Sbjct: 421 EHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVAR 480
Query: 442 RIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREK 477
R+++E P + +VL+ N Y++ G+W+ LR K
Sbjct: 481 RLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGK 516
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 175/388 (45%), Gaps = 54/388 (13%)
Query: 65 SYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFT-- 122
++A LFD++PQ DL N+ + +H S + ND+L +F + R S P+ S FT
Sbjct: 35 THADHLFDELPQRDLSSLNSQLSSHLRSGNP-NDTLALFLQIHRAS---PDLSSHTFTPV 90
Query: 123 FGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDL 182
GAC + G QV + +K G ++ ALI MY K+G
Sbjct: 91 LGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYG----------------- 133
Query: 183 YSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQV 242
++ + +F+ ++E+D+VSW+ +++G+++ G EAL F M +
Sbjct: 134 --------------HLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRE 179
Query: 243 GPKPNEYTFVSALAACSNLVALDQGKWIHSFI---GRGEIKMNERLLASIIDMYAKCGEI 299
+ +E+T S + C++L L QGK +H+ + GR + + ++I Y+ G I
Sbjct: 180 RVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDLVVLG----TAMISFYSSVGLI 235
Query: 300 ESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNA 359
A +V+ N N++I G + EA + + + PN + L
Sbjct: 236 NEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQR-----PNVRVLSSSLAG 290
Query: 360 CSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVA 419
CS + GK + + + G + + + ++D+ + G + +A + ++P + V
Sbjct: 291 CSDNSDLWIGKQIHCVALRN-GFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIP-SKSVV 348
Query: 420 IWGAVLNACRIYKDMERGYRIGRIIKEM 447
W ++++A + D G + I +EM
Sbjct: 349 SWTSMIDAYAVNGD---GVKALEIFREM 373
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 158/386 (40%), Gaps = 70/386 (18%)
Query: 20 LASLVDTCKSI---QQIKQTHAQLVTTA--LISHHVSANKFLKLVADASLSYAHKLFDQI 74
L+S+V TC S+ QQ KQ HA +V T L+ + F V ++ A K+++ +
Sbjct: 188 LSSVVKTCASLKILQQGKQVHAMVVVTGRDLVVLGTAMISFYSSVG--LINEAMKVYNSL 245
Query: 75 P-QPDLFIYNTMIKAHSLSPSSC---NDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGL 130
D + N++I S C + F L++R PN + C +
Sbjct: 246 NVHTDEVMLNSLI-------SGCIRNRNYKEAFLLMSRQR---PNVRVLSSSLAGCSDNS 295
Query: 131 SVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIA 190
+ G+Q+ A++ G S+ + N L+ MYGK G + R +F K + SW +MI
Sbjct: 296 DLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMID 355
Query: 191 AYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYT 250
AY +G+ +A E+F EM E+ G PN T
Sbjct: 356 AYAVNGDGVKALEIFREMCEEG-----------------------------SGVLPNSVT 386
Query: 251 FVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLAS------IIDMYAKCGEIES--- 301
F+ ++AC++ + +GK G +K RL+ ID+ +K GE E
Sbjct: 387 FLVVISACAHAGLVKEGKECF-----GMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWR 441
Query: 302 -ASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLN-- 358
R+ N W A++ +++ + V +++ E N +V + N
Sbjct: 442 LVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFY 501
Query: 359 -ACSHGYMVEE--GKLYFRLMVSDYG 381
A +VEE GKL + +V G
Sbjct: 502 AAMGKWDVVEELRGKLKNKGLVKTAG 527
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 122/437 (27%), Positives = 221/437 (50%), Gaps = 44/437 (10%)
Query: 40 LVTTALISHHVSANKFLKLVADASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDS 99
L++TAL+ + +LK A+ A +FDQ+ + + MI ++ +
Sbjct: 186 LLSTALV------DMYLKFDDHAA---AFHVFDQMEVKNEVSWTAMISG-CVANQNYEMG 235
Query: 100 LMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIG 159
+ +FR + R++ L PNR + + AC V L+ +V + G
Sbjct: 236 VDLFRAMQREN-LRPNRVTLLSVLPAC------------------VELNYGSSLVKEIHG 276
Query: 160 MYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTI 219
+ G A ++ ++ TM Y GN+S ++ LF+ + +DVV WS++
Sbjct: 277 FSFRHGC---------HADERLTAAFMTM---YCRCGNVSLSRVLFETSKVRDVVMWSSM 324
Query: 220 IAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEI 279
I+GY + G E ++ ++M + G + N T ++ ++AC+N L +HS I +
Sbjct: 325 ISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGF 384
Query: 280 KMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQ 339
+ L ++IDMYAKCG + +A VF+E K V W++MI + +HG SEA+++F+
Sbjct: 385 MSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLV-SWSSMINAYGLHGHGSEALEIFK 443
Query: 340 KMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRA 399
M + + F+A+L+AC+H +VEE + F Y + +EHY C ++LL R
Sbjct: 444 GMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFT-QAGKYHMPVTLEHYACYINLLGRF 502
Query: 400 GLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDME-RGYRIGRIIKEMDPNHVGCHVLL 458
G + +A ++ +MPM P IW ++L+AC + ++ G I + + +P++ +VLL
Sbjct: 503 GKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLL 562
Query: 459 GNIYSSSGRWNDARMLR 475
I++ SG ++ A +R
Sbjct: 563 SKIHTESGNYHAAEEVR 579
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 104/229 (45%), Gaps = 36/229 (15%)
Query: 135 GEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVG 194
G Q+ +K G D + V N+LI MY K + RK +AV K
Sbjct: 66 GAQLHCLCLKAGADCDTVVSNSLISMYAK-----FSRK---YAVRK-------------- 103
Query: 195 SGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSA 254
+FDEM +D VS+ +II Q G EA+ M G P S
Sbjct: 104 ---------VFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASL 154
Query: 255 LAACSNLVALDQ-GKWIHSFIGRGEIKMNERLLAS--IIDMYAKCGEIESASRVFWEHNA 311
LA C+ + + + + H+ + E +M E +L S ++DMY K + +A VF +
Sbjct: 155 LALCTRMGSSSKVARMFHALVLVDE-RMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEV 213
Query: 312 KRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNAC 360
K +V W AMI G + + +F+ M+ EN+ PN+VT +++L AC
Sbjct: 214 KNEV-SWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPAC 261
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/419 (30%), Positives = 213/419 (50%), Gaps = 27/419 (6%)
Query: 67 AHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRD--SGLSPNRYSFVFTFG 124
A +LFD++ + D +N +I ++ S ++ F+LL R SG+ + ++ G
Sbjct: 238 ARRLFDRMSERDAVSWNAIINCYT-SEEKLGEA---FKLLDRMYLSGVEASIVTWNTIAG 293
Query: 125 AC---GN---GLSVQEGEQVRSHAVKVGLDSNVFVVNAL-----IGMYGKWGLVEYGRKV 173
C GN L+ G +R+ V++G +V ++N L IG KWG V + +
Sbjct: 294 GCLEAGNYIGALNCVVG--MRNCNVRIG---SVAMINGLKACSHIGAL-KWGKVFHCLVI 347
Query: 174 FEWAVDKDLYS-WNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEA 232
+ D+ + N++I Y ++ A +F +++ + +W++II+G+ E
Sbjct: 348 RSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEET 407
Query: 233 LDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLL-ASIID 291
ML G PN T S L + + L GK H +I R + + +L S++D
Sbjct: 408 SFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVD 467
Query: 292 MYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKV 351
MYAK GEI +A RVF + KV + ++I G+ GK A+ F+ M + P+ V
Sbjct: 468 MYAKSGEIIAAKRVFDSMRKRDKV-TYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHV 526
Query: 352 TFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISS 411
T VA+L+ACSH +V EG F M +GI +EHY CMVDL RAG L +A D+ +
Sbjct: 527 TMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHT 586
Query: 412 MPMAPDVAIWGAVLNACRIYKDMERG-YRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWN 469
+P P A+ +L AC I+ + G + +++ E P H+G ++LL ++Y+ +G W+
Sbjct: 587 IPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWS 645
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 103/451 (22%), Positives = 200/451 (44%), Gaps = 30/451 (6%)
Query: 21 ASLVDTCKSIQQI---KQTHAQLVTTALISHHVSANKFLKLVADASL-SYAHKLFDQIPQ 76
ASL+ TC + +Q HA +++ L V K + + +L A + +
Sbjct: 87 ASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEI 146
Query: 77 PDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGE 136
+N +I ++ + +S+ V++ + G+ + +++ AC L G
Sbjct: 147 LHPLPWNVLIGSY-IRNKRFQESVSVYKRMM-SKGIRADEFTYPSVIKACAALLDFAYGR 204
Query: 137 QVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSG 196
V N++V NALI MY ++G V+ R++F+ ++D SWN +I Y
Sbjct: 205 VVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEE 264
Query: 197 NMSQAKELFDEMQ----EQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFV 252
+ +A +L D M E +V+W+TI G ++ G ++ AL+ M + +
Sbjct: 265 KLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMI 324
Query: 253 SALAACSNLVALDQGKWIHSFIGRGEIKMN--ERLLASIIDMYAKCGEIESASRVFWEHN 310
+ L ACS++ AL GK H + R + + + S+I MY++C ++ A VF +
Sbjct: 325 NGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVE 384
Query: 311 AKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGK 370
A + WN++I GFA + + E + ++M + PN +T ++L + ++ GK
Sbjct: 385 AN-SLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGK 443
Query: 371 LYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRI 430
+ ++ + + +VD+ +++G + A+ + SM V + R+
Sbjct: 444 EFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRL 503
Query: 431 ---------YKDMERGYRIGRIIKEMDPNHV 452
+KDM+R + P+HV
Sbjct: 504 GKGEVALAWFKDMDRS--------GIKPDHV 526
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/423 (20%), Positives = 172/423 (40%), Gaps = 83/423 (19%)
Query: 72 DQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSP-NRYSFVFTFGACGNGL 130
+ +PQ ++N+ H +S ++ F LL SG YS C
Sbjct: 43 ESVPQ---VLFNSF--RHCISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFN 97
Query: 131 SVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIA 190
G+Q+ +H + GL+ + +V L+ Y + L++ + + E + WN +I
Sbjct: 98 EFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIG 157
Query: 191 AYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYT 250
+Y+ + F E++ + RM+ G + +E+T
Sbjct: 158 SYIRNKR-------------------------------FQESVSVYKRMMSKGIRADEFT 186
Query: 251 FVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHN 310
+ S + AC+ L+ G+ +H I + N + ++I MY + G+++ A R+F +
Sbjct: 187 YPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLF-DRM 245
Query: 311 AKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTF----------------- 353
++R WNA+I + K EA K+ +M + V + VT+
Sbjct: 246 SERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGAL 305
Query: 354 ---------------VALLN---ACSHGYMVEEGKLYFRLMVSDYGIIPEIEHY-GCMVD 394
VA++N ACSH ++ GK++ L++ +I++ ++
Sbjct: 306 NCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLIT 365
Query: 395 LLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEM-----DP 449
+ SR L+ A + + A ++ W ++++ + ER ++KEM P
Sbjct: 366 MYSRCSDLRHAFIVFQQVE-ANSLSTWNSIISG---FAYNERSEETSFLLKEMLLSGFHP 421
Query: 450 NHV 452
NH+
Sbjct: 422 NHI 424
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/419 (30%), Positives = 213/419 (50%), Gaps = 27/419 (6%)
Query: 67 AHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRD--SGLSPNRYSFVFTFG 124
A +LFD++ + D +N +I ++ S ++ F+LL R SG+ + ++ G
Sbjct: 238 ARRLFDRMSERDAVSWNAIINCYT-SEEKLGEA---FKLLDRMYLSGVEASIVTWNTIAG 293
Query: 125 AC---GN---GLSVQEGEQVRSHAVKVGLDSNVFVVNAL-----IGMYGKWGLVEYGRKV 173
C GN L+ G +R+ V++G +V ++N L IG KWG V + +
Sbjct: 294 GCLEAGNYIGALNCVVG--MRNCNVRIG---SVAMINGLKACSHIGAL-KWGKVFHCLVI 347
Query: 174 FEWAVDKDLYS-WNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEA 232
+ D+ + N++I Y ++ A +F +++ + +W++II+G+ E
Sbjct: 348 RSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEET 407
Query: 233 LDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLL-ASIID 291
ML G PN T S L + + L GK H +I R + + +L S++D
Sbjct: 408 SFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVD 467
Query: 292 MYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKV 351
MYAK GEI +A RVF + KV + ++I G+ GK A+ F+ M + P+ V
Sbjct: 468 MYAKSGEIIAAKRVFDSMRKRDKV-TYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHV 526
Query: 352 TFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISS 411
T VA+L+ACSH +V EG F M +GI +EHY CMVDL RAG L +A D+ +
Sbjct: 527 TMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHT 586
Query: 412 MPMAPDVAIWGAVLNACRIYKDMERG-YRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWN 469
+P P A+ +L AC I+ + G + +++ E P H+G ++LL ++Y+ +G W+
Sbjct: 587 IPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWS 645
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 103/451 (22%), Positives = 200/451 (44%), Gaps = 30/451 (6%)
Query: 21 ASLVDTCKSIQQI---KQTHAQLVTTALISHHVSANKFLKLVADASL-SYAHKLFDQIPQ 76
ASL+ TC + +Q HA +++ L V K + + +L A + +
Sbjct: 87 ASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEI 146
Query: 77 PDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGE 136
+N +I ++ + +S+ V++ + G+ + +++ AC L G
Sbjct: 147 LHPLPWNVLIGSY-IRNKRFQESVSVYKRMM-SKGIRADEFTYPSVIKACAALLDFAYGR 204
Query: 137 QVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSG 196
V N++V NALI MY ++G V+ R++F+ ++D SWN +I Y
Sbjct: 205 VVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEE 264
Query: 197 NMSQAKELFDEMQ----EQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFV 252
+ +A +L D M E +V+W+TI G ++ G ++ AL+ M + +
Sbjct: 265 KLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMI 324
Query: 253 SALAACSNLVALDQGKWIHSFIGRGEIKMN--ERLLASIIDMYAKCGEIESASRVFWEHN 310
+ L ACS++ AL GK H + R + + + S+I MY++C ++ A VF +
Sbjct: 325 NGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVE 384
Query: 311 AKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGK 370
A + WN++I GFA + + E + ++M + PN +T ++L + ++ GK
Sbjct: 385 AN-SLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGK 443
Query: 371 LYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRI 430
+ ++ + + +VD+ +++G + A+ + SM V + R+
Sbjct: 444 EFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRL 503
Query: 431 ---------YKDMERGYRIGRIIKEMDPNHV 452
+KDM+R + P+HV
Sbjct: 504 GKGEVALAWFKDMDRS--------GIKPDHV 526
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/423 (20%), Positives = 172/423 (40%), Gaps = 83/423 (19%)
Query: 72 DQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSP-NRYSFVFTFGACGNGL 130
+ +PQ ++N+ H +S ++ F LL SG YS C
Sbjct: 43 ESVPQ---VLFNSF--RHCISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFN 97
Query: 131 SVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIA 190
G+Q+ +H + GL+ + +V L+ Y + L++ + + E + WN +I
Sbjct: 98 EFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIG 157
Query: 191 AYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYT 250
+Y+ + F E++ + RM+ G + +E+T
Sbjct: 158 SYIRNKR-------------------------------FQESVSVYKRMMSKGIRADEFT 186
Query: 251 FVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHN 310
+ S + AC+ L+ G+ +H I + N + ++I MY + G+++ A R+F +
Sbjct: 187 YPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLF-DRM 245
Query: 311 AKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTF----------------- 353
++R WNA+I + K EA K+ +M + V + VT+
Sbjct: 246 SERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGAL 305
Query: 354 ---------------VALLN---ACSHGYMVEEGKLYFRLMVSDYGIIPEIEHY-GCMVD 394
VA++N ACSH ++ GK++ L++ +I++ ++
Sbjct: 306 NCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLIT 365
Query: 395 LLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEM-----DP 449
+ SR L+ A + + A ++ W ++++ + ER ++KEM P
Sbjct: 366 MYSRCSDLRHAFIVFQQVE-ANSLSTWNSIISG---FAYNERSEETSFLLKEMLLSGFHP 421
Query: 450 NHV 452
NH+
Sbjct: 422 NHI 424
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 176/368 (47%), Gaps = 22/368 (5%)
Query: 258 CSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWP 317
C + AL++ + +H I ++ R ++I+MY+ C + A VF E KR
Sbjct: 122 CGEVEALEEARVVHDCI----TPLDARSYHTVIEMYSGCRSTDDALNVFNEM-PKRNSET 176
Query: 318 WNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMV 377
W MI A +G+ AI +F + E P+K F A+ AC + EG L+F M
Sbjct: 177 WGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMY 236
Query: 378 SDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERG 437
DYG++ +E Y ++++L+ G L EA D + M + P V +W ++N C + +E G
Sbjct: 237 RDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLELG 296
Query: 438 YRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSI--EL 495
R +IK++D + + G + + + +D+ M + K++ C I +
Sbjct: 297 DRFAELIKKLDASRMSKESNAGLV---AAKASDSAMEK--------LKELRYCQMIRDDP 345
Query: 496 NGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGYVPVFGXXXXXXXXXXXXXTALSVH 555
++F GD SH + S + ++ G+VP L
Sbjct: 346 KKRMHEFRAGDTSHLGT---VSAFRSLKVQMLDIGFVPA-TRVCFVTVEEEEKEEQLLFR 401
Query: 556 SEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRVIIVRDRTRYHHFKDG 615
S KLA A ++N+ P+ +++N+R C D H K IS + R +I RD+ +YH +K+G
Sbjct: 402 SNKLAFAHAIINSEARRPLTVLQNMRTCIDGHNTFKMISLITGRALIQRDKKKYHFYKNG 461
Query: 616 ICSCKDYW 623
+CSCKDYW
Sbjct: 462 VCSCKDYW 469
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 1/203 (0%)
Query: 122 TFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKD 181
TF A + ++E +V G + + L + G+ +E R V + D
Sbjct: 83 TFDALCKQVKIREALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCITPLD 142
Query: 182 LYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQ 241
S++T+I Y G + A +F+EM +++ +W T+I + G A+D F R ++
Sbjct: 143 ARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIE 202
Query: 242 VGPKPNEYTFVSALAACSNLVALDQGKW-IHSFIGRGEIKMNERLLASIIDMYAKCGEIE 300
G KP++ F + AC ++ +++G S + ++ ++I+M A CG ++
Sbjct: 203 EGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLD 262
Query: 301 SASRVFWEHNAKRKVWPWNAMIG 323
A + V W ++
Sbjct: 263 EALDFVERMTVEPSVEMWETLMN 285
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 166 bits (419), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 188/403 (46%), Gaps = 31/403 (7%)
Query: 227 GCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLL 286
G + EA++ + G + + C AL+ + +H I +
Sbjct: 98 GNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGAR 157
Query: 287 ASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNA-----MIGGFAMHGKPSEAIKVFQKM 341
+II+MY+ C ++ A +VF E + WN+ M+ F +G EAI +F +
Sbjct: 158 NAIIEMYSGCCSVDDALKVFEE------MPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRF 211
Query: 342 KVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGL 401
K E PN F + + C+ V+EG L F+ M +YGI+P +EHY + +L+ +G
Sbjct: 212 KEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGH 271
Query: 402 LKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNI 461
L EA + + MPM P V +W ++N R++ D+E G R +++++D + +
Sbjct: 272 LDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLDATRL-------DK 324
Query: 462 YSSSGRWNDARMLREKSEISTATKKIPGCSSIELNGTFYQ-FLVGDRSHPQSRELYSFLD 520
SS+G ++ K+ S KK P S FY F D SHPQ +Y L
Sbjct: 325 VSSAG------LVATKA--SDFVKKEPSTRS---EPYFYSTFRPVDSSHPQMNIIYETLM 373
Query: 521 EMTTKLKIAGYVPVFGXXXXXXXXXXXXXTALSVHSEKLAIAFGLLNTAPGTPIRIVKNL 580
+ ++LK GYVP + E++A+ LL + P + I ++ N+
Sbjct: 374 SLRSQLKEMGYVPDTRYYRSLIMAMENKEQIFG-YREEIAVVESLLKSKPRSAITLLTNI 432
Query: 581 RVCRDCHQVTKFISKVYDRVIIVRDRTRYHHFKDGICSCKDYW 623
R+ DCH + K +S + R +I RD YH FK+G+C C + W
Sbjct: 433 RIVGDCHDMMKLMSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 120/486 (24%), Positives = 224/486 (46%), Gaps = 42/486 (8%)
Query: 20 LASLVDTCKSIQQIKQTHAQLVTTALISHH-VSANKFLKLVADASL-SYAHKLFDQIPQP 77
LASLV TC ++ +Q H + + + ++ V N + + + YA +F +
Sbjct: 142 LASLV-TC--VRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDR 198
Query: 78 DLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQ 137
D+ +N +I S S S + + L R+ + P+ Y+ C + + +G+Q
Sbjct: 199 DVVSWNCLIL--SCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQ 256
Query: 138 VRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGN 197
+ +K+G SN V+ A I M+ K
Sbjct: 257 ALALCIKMGFLSNSIVLGAGIDMFSK-------------------------------CNR 285
Query: 198 MSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAA 257
+ + +LF E+++ D V +++I Y C +AL F + +P+++TF S L++
Sbjct: 286 LDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSS 345
Query: 258 CSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWP 317
N V LD G +HS + + ++ + S+++MY K G ++ A VF + + K ++
Sbjct: 346 M-NAVMLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIF- 403
Query: 318 WNAMIGGFAMHGKPSEAIKVFQKMKV-ENVSPNKVTFVALLNACSHGYMVEEGKLYFRLM 376
WN +I G A + + E++ +F ++ + +++ P++VT + +L AC + V EG F M
Sbjct: 404 WNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSM 463
Query: 377 VSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMER 436
+G+ P EHY C+++LL R G++ EA+D+ +P P IW +L A D
Sbjct: 464 EKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRL 523
Query: 437 GYRIGRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIPGCSSIELN 496
+ + + E +P +++L IY + RW ++ LR K G S I +
Sbjct: 524 AETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMN-EHKLKSAQGSSKISIE 582
Query: 497 GTFYQF 502
+ + F
Sbjct: 583 SSVFSF 588
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 167/371 (45%), Gaps = 63/371 (16%)
Query: 28 KSIQQIKQTHAQLVTTALISHHVSANKFLKL-VADASLSYAHKLFDQIPQPDLFIYNTMI 86
KS K HAQL+ + N+ L+L S+ A +LFD IP + +N +
Sbjct: 18 KSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCL 77
Query: 87 KAHSLSPSSCNDSLMVF-RLLTRD--------SGLSP--------------NRYSF---V 120
K N++L +F + RD SGL R+
Sbjct: 78 KGL-FKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTE 136
Query: 121 FTFGACGNGLS-VQEGEQVRSHAVKVGLDS-NVFVVNALIGMYGKWGLVEYGRKVFEWAV 178
FTF + ++ V+ GEQ+ +A+ G+ N+ V N+++ MY + G+ +Y VF
Sbjct: 137 FTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTME 196
Query: 179 DKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHR 238
D+D+ SWN +I + SGN KE+ ALD F
Sbjct: 197 DRDVVSWNCLILSCSDSGN----KEV---------------------------ALDQFWL 225
Query: 239 MLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGE 298
M ++ +P+EYT ++ CS+L L +GK + + N +L + IDM++KC
Sbjct: 226 MREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNR 285
Query: 299 IESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLN 358
++ + ++F E V N+MIG ++ H +A+++F ++V P+K TF ++L+
Sbjct: 286 LDDSVKLFRELEKWDSVLC-NSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLS 344
Query: 359 ACSHGYMVEEG 369
+ + M++ G
Sbjct: 345 SM-NAVMLDHG 354
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 136/291 (46%), Gaps = 16/291 (5%)
Query: 138 VRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGN 197
V + ++ G + N + +Y K G V ++F+ DK+ +WN + +G
Sbjct: 26 VHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGY 85
Query: 198 MSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTF--VSAL 255
++ A +LFDEM E+DVVSW+T+I+G V G + F M + +P E+TF +++L
Sbjct: 86 LNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASL 145
Query: 256 AACSNLVALDQGKWIH-SFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRK 314
C + G+ IH + I G + N + S++DMY + G + A VF R
Sbjct: 146 VTC-----VRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTME-DRD 199
Query: 315 VWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFR 374
V WN +I + G A+ F M+ + P++ T +++ CS + +GK
Sbjct: 200 VVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALA 259
Query: 375 LMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVL 425
L + G + G +D+ S+ L + S+ + ++ W +VL
Sbjct: 260 LCIK-MGFLSNSIVLGAGIDMFSKCNRLDD------SVKLFRELEKWDSVL 303
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 117/450 (26%), Positives = 219/450 (48%), Gaps = 43/450 (9%)
Query: 34 KQTHAQLVTTAL-ISHHVSANKFLKLV-ADASLSYAHKLFDQIPQPDLFIYNTMIKAHSL 91
KQ H+ +V + IS+ AN + A LS + + F+ +P+ D+ +N+++ +
Sbjct: 233 KQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCA- 291
Query: 92 SPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLD-SN 150
S DSL +F + + G P+ F+ C +Q G+Q+ + +K+G D S+
Sbjct: 292 DYGSVLDSLDLFSKM-QFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSS 350
Query: 151 VFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELF----D 206
+ V +ALI MYGK +E +++ +L N+++ + + G E+F D
Sbjct: 351 LHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMID 410
Query: 207 EMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQ 266
E D V+ ST++ K + +L +C+
Sbjct: 411 EGTGIDEVTLSTVL------------------------KALSLSLPESLHSCT------- 439
Query: 267 GKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFA 326
+H + + + S+ID Y K G+ E + +VF E + ++ ++I G+A
Sbjct: 440 --LVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTP-NIFCLTSIINGYA 496
Query: 327 MHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEI 386
+G ++ +K+ ++M N+ P++VT +++L+ CSH +VEEG+L F + S YGI P
Sbjct: 497 RNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGR 556
Query: 387 EHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKE 446
+ Y CMVDLL RAGL+++AE ++ D W ++L +CRI+++ G R ++
Sbjct: 557 KLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMN 616
Query: 447 MDPNHVGCHVLLGNIYSSSGRWNDARMLRE 476
++P + ++ + Y G + +R +RE
Sbjct: 617 LEPENFAVYIQVSKFYFEIGDFEISRQIRE 646
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 127/250 (50%), Gaps = 2/250 (0%)
Query: 182 LYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQ 241
+Y+ N I + SGN+ A E FDEM +DVV+++ +I+G + GC + A++ + M+
Sbjct: 46 VYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVS 105
Query: 242 VGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIES 301
G + + TF S L+ CS+ + +G +H + N + ++++ +YA ++
Sbjct: 106 CGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDV 165
Query: 302 ASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACS 361
A ++F E R + N ++ F G+ +V+ +M++E V+ N +T+ ++ CS
Sbjct: 166 ALKLFDEM-LDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCS 224
Query: 362 HGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIW 421
H +V EGK L+V I I +VD S G L + +++P DV W
Sbjct: 225 HDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVP-EKDVISW 283
Query: 422 GAVLNACRIY 431
++++ C Y
Sbjct: 284 NSIVSVCADY 293
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 147/317 (46%), Gaps = 39/317 (12%)
Query: 57 KLVADASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNR 116
+L+ +L AH+ FD++ D+ YN +I +S S + +++ GL +
Sbjct: 55 ELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVS--CGLRESA 112
Query: 117 YSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEW 176
+F C + L +EG QV + +G N+FV +AL+G+Y LV+ K+F+
Sbjct: 113 STFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDE 172
Query: 177 AVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFF 236
+D++L N ++ + +G ++K LF + +
Sbjct: 173 MLDRNLAVCNLLLRCFCQTG---ESKRLF----------------------------EVY 201
Query: 237 HRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASI-IDMYAK 295
RM G N T+ + CS+ + +GK +HS + + ++ +A++ +D Y+
Sbjct: 202 LRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSA 261
Query: 296 CGEIESASRVFWEHNA--KRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTF 353
CG++ + R F NA ++ V WN+++ A +G +++ +F KM+ P+ F
Sbjct: 262 CGDLSGSMRSF---NAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPF 318
Query: 354 VALLNACSHGYMVEEGK 370
++ LN CS ++ GK
Sbjct: 319 MSFLNFCSRNSDIQSGK 335
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/468 (22%), Positives = 197/468 (42%), Gaps = 80/468 (17%)
Query: 35 QTHAQLVTTALISHHVSANKFLKLVADASL-SYAHKLFDQIPQPDLFIYNTMIKAHSLSP 93
Q H ++++ + + + L A L A KLFD++ +L + N +++ +
Sbjct: 133 QVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTG 192
Query: 94 SSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLD-SNVF 152
S L L G++ N ++ + C + V EG+Q+ S VK G + SN+F
Sbjct: 193 ES--KRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIF 250
Query: 153 VVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQD 212
V N L+ D YS G++S + F+ + E+D
Sbjct: 251 VANVLV----------------------DYYS---------ACGDLSGSMRSFNAVPEKD 279
Query: 213 VVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHS 272
V+SW++I++ G +++LD F +M G +P+ F+S L CS + GK IH
Sbjct: 280 VISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHC 339
Query: 273 FIGRGEIKMNE-RLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKP 331
++ + ++ + +++IDMY KC IE+ S + ++ + N+++ G
Sbjct: 340 YVLKMGFDVSSLHVQSALIDMYGKCNGIEN-SALLYQSLPCLNLECCNSLMTSLMHCGIT 398
Query: 332 SEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGC 391
+ I++F M E ++VT +L A S +PE H
Sbjct: 399 KDIIEMFGLMIDEGTGIDEVTLSTVLKALSLS-------------------LPESLHSCT 439
Query: 392 MVDLLS-RAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPN 450
+V + ++G A DVA+ ++++A Y + ++ E+D
Sbjct: 440 LVHCCAIKSG-------------YAADVAVSCSLIDA---YTKSGQNEVSRKVFDELDTP 483
Query: 451 HVGCHVLLGNIYSSSGRWNDA-RMLREKSEIS------TATKKIPGCS 491
++ C + N Y+ +G D +MLRE ++ T + GCS
Sbjct: 484 NIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCS 531
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 144/301 (47%), Gaps = 32/301 (10%)
Query: 108 RDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLV 167
+ G P+ + C ++++G+++ +A+K NV +V +L+ MY K G+
Sbjct: 410 QQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVP 469
Query: 168 EYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVG 227
EY + LFD +++++V +W+ +I YV+
Sbjct: 470 EYPIR-------------------------------LFDRLEQRNVKAWTAMIDCYVENC 498
Query: 228 CFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLA 287
++ F ML +P+ T L CS+L AL GK +H I + E + + A
Sbjct: 499 DLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSA 558
Query: 288 SIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVS 347
II MY KCG++ SA+ F + A + W A+I + + +AI F++M +
Sbjct: 559 RIIKMYGKCGDLRSANFSF-DAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFT 617
Query: 348 PNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAED 407
PN TF A+L+ CS V+E +F LM+ Y + P EHY +++LL+R G ++EA+
Sbjct: 618 PNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQR 677
Query: 408 M 408
+
Sbjct: 678 L 678
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/468 (23%), Positives = 204/468 (43%), Gaps = 74/468 (15%)
Query: 20 LASLVDTC---KSIQQIKQTHAQLVTTALISHHVSANKFLKL-VADASLSYAHKLFDQIP 75
++L++ C KS+ KQ H + L S+ K + + A S+ A K+FD+
Sbjct: 114 FSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDEST 173
Query: 76 QPDLFIYNTMIKAHSLS-PSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQE 134
+++ +N +++ +S D L F + R+ G+ N YS F + ++++
Sbjct: 174 SSNVYSWNALLRGTVISGKKRYQDVLSTFTEM-RELGVDLNVYSLSNVFKSFAGASALRQ 232
Query: 135 GEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVG 194
G + + A+K GL ++VF+ +L+ MY K G V R+V
Sbjct: 233 GLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRV--------------------- 271
Query: 195 SGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRML-QVGPKPNEYTFVS 253
FDE+ E+D+V W +IAG EAL F M+ + PN +
Sbjct: 272 ----------FDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTT 321
Query: 254 ALAACSNLVALDQGKWIHSFIGRGEIKMNERLLAS-IIDMYAKCGEIESASRVFWEHNAK 312
L ++ AL GK +H+ + + + + + + S +ID+Y KCG++ S RVF+ + +
Sbjct: 322 ILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFY-GSKQ 380
Query: 313 RKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGK-- 370
R W A++ G+A +G+ +A++ M+ E P+ VT +L C+ +++GK
Sbjct: 381 RNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEI 440
Query: 371 ---------------------LYFRLMVSDYGI-------IPEIEHYGCMVDLLSRAGLL 402
+Y + V +Y I ++ + M+D L
Sbjct: 441 HCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDL 500
Query: 403 KEAEDMISSMPMA---PDVAIWGAVLNACRIYKDMERGYRI-GRIIKE 446
+ ++ M ++ PD G VL C K ++ G + G I+K+
Sbjct: 501 RAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKK 548
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 181/402 (45%), Gaps = 39/402 (9%)
Query: 29 SIQQIKQTHAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIPQPDLFIYNTMIK 87
+++Q +THA + L + + + + A ++FD+I + D+ ++ MI
Sbjct: 229 ALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIA 288
Query: 88 AHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKV-G 146
+ + ++L +FR + + + PN G+ +++ G++V +H +K
Sbjct: 289 GLAHNKRQW-EALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKN 347
Query: 147 LDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFD 206
FV + LI +Y K G + GR+V + GS
Sbjct: 348 YVEQPFVHSGLIDLYCKCGDMASGRRV------------------FYGS----------- 378
Query: 207 EMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQ 266
++++ +SW+ +++GY G F +AL M Q G +P+ T + L C+ L A+ Q
Sbjct: 379 --KQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQ 436
Query: 267 GKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFA 326
GK IH + + N L+ S++ MY+KCG E R+F + +R V W AMI +
Sbjct: 437 GKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLF-DRLEQRNVKAWTAMIDCYV 495
Query: 327 MHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGK-LYFRLMVSDYGIIPE 385
+ I+VF+ M + P+ VT +L CS ++ GK L+ ++ ++ IP
Sbjct: 496 ENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPF 555
Query: 386 IEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNA 427
+ ++ + + G L+ A ++ + + W A++ A
Sbjct: 556 VS--ARIIKMYGKCGDLRSANFSFDAVAVKGSLT-WTAIIEA 594
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 132/292 (45%), Gaps = 33/292 (11%)
Query: 111 GLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYG 170
G+ N +F AC S+ G+QV H GL+SN F+ L+ MY G V+
Sbjct: 106 GIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDA 165
Query: 171 RKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFM 230
+KVF+ + ++YSWN ++ V SG + + QDV+S
Sbjct: 166 QKVFDESTSSNVYSWNALLRGTVISG----------KKRYQDVLST-------------- 201
Query: 231 EALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASII 290
F M ++G N Y+ + + + AL QG H+ + + + L S++
Sbjct: 202 -----FTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLV 256
Query: 291 DMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKM-KVENVSPN 349
DMY KCG++ A RVF + +R + W AMI G A + + EA+ +F+ M E + PN
Sbjct: 257 DMYFKCGKVGLARRVF-DEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPN 315
Query: 350 KVTFVALLNACSHGYMVEEGK-LYFRLMVSDYGIIPEIEHYGCMVDLLSRAG 400
V +L ++ GK ++ ++ S + H G ++DL + G
Sbjct: 316 SVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSG-LIDLYCKCG 366
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 128/291 (43%), Gaps = 38/291 (13%)
Query: 20 LASLVDTC---KSIQQIKQTHAQLVTTALISHHVSANKFLKLVADASL-SYAHKLFDQIP 75
+A+++ C ++I+Q K+ H + + + + + + + Y +LFD++
Sbjct: 421 IATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLE 480
Query: 76 QPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEG 135
Q ++ + MI + + + VFRL+ S P+ + C + +++ G
Sbjct: 481 QRNVKAWTAMIDCY-VENCDLRAGIEVFRLMLL-SKHRPDSVTMGRVLTVCSDLKALKLG 538
Query: 136 EQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGS 195
+++ H +K +S FV +I MYGK G DL S N
Sbjct: 539 KELHGHILKKEFESIPFVSARIIKMYGKCG---------------DLRSANFS------- 576
Query: 196 GNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSAL 255
FD + + ++W+ II Y F +A++ F +M+ G PN +TF + L
Sbjct: 577 ---------FDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVL 627
Query: 256 AACSNLVALDQG-KWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRV 305
+ CS +D+ ++ + + ++ +E + +I++ +CG +E A R+
Sbjct: 628 SICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 89/196 (45%), Gaps = 5/196 (2%)
Query: 232 ALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIID 291
AL + Q G N TF + L AC +L GK +H I ++ NE L ++
Sbjct: 95 ALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVH 154
Query: 292 MYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKP--SEAIKVFQKMKVENVSPN 349
MY CG ++ A +VF E + V+ WNA++ G + GK + + F +M+ V N
Sbjct: 155 MYTACGSVKDAQKVFDESTSS-NVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLN 213
Query: 350 KVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMI 409
+ + + + + +G L + + G+ + +VD+ + G + A +
Sbjct: 214 VYSLSNVFKSFAGASALRQGLKTHALAIKN-GLFNSVFLKTSLVDMYFKCGKVGLARRVF 272
Query: 410 SSMPMAPDVAIWGAVL 425
+ + D+ +WGA++
Sbjct: 273 DEI-VERDIVVWGAMI 287
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 174/366 (47%), Gaps = 38/366 (10%)
Query: 64 LSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTF 123
L YA K+FD +P+ + + MI + L +++ +F + N FV
Sbjct: 133 LVYARKVFDSMPEKNTVTWTAMIDGY-LKYGLEDEAFALFEDYVKHGIRFTNERMFVCLL 191
Query: 124 GACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLY 183
C + G QV + VKVG+ N+ V ++L+ Y +
Sbjct: 192 NLCSRRAEFELGRQVHGNMVKVGV-GNLIVESSLVYFYAQ-------------------- 230
Query: 184 SWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVG 243
G ++ A FD M+E+DV+SW+ +I+ + G ++A+ F ML
Sbjct: 231 -----------CGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHW 279
Query: 244 PKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESAS 303
PNE+T S L ACS AL G+ +HS + + IK + + S++DMYAKCGEI
Sbjct: 280 FLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCR 339
Query: 304 RVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNAC-SH 362
+VF + + R W ++I A G EAI +F+ MK ++ N +T V++L AC S
Sbjct: 340 KVF-DGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSV 398
Query: 363 GYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWG 422
G ++ +L+ +++ + I + +V L + G ++A +++ +P + DV W
Sbjct: 399 GALLLGKELHAQIIKNS--IEKNVYIGSTLVWLYCKCGESRDAFNVLQQLP-SRDVVSWT 455
Query: 423 AVLNAC 428
A+++ C
Sbjct: 456 AMISGC 461
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 165/345 (47%), Gaps = 38/345 (11%)
Query: 20 LASLVDTC---KSIQQIKQTHAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIP 75
+ S++ C K+++ +Q H+ +V + + + + A +S K+FD +
Sbjct: 287 VCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMS 346
Query: 76 QPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEG 135
+ + ++I AH+ +++ +FR++ R L N + V ACG+ ++ G
Sbjct: 347 NRNTVTWTSIIAAHAREGFG-EEAISLFRIMKRRH-LIANNLTVVSILRACGSVGALLLG 404
Query: 136 EQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGS 195
+++ + +K ++ NV++ +T++ Y
Sbjct: 405 KELHAQIIKNSIEKNVYI-------------------------------GSTLVWLYCKC 433
Query: 196 GNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSAL 255
G A + ++ +DVVSW+ +I+G +G EALDF M+Q G +PN +T+ SAL
Sbjct: 434 GESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSAL 493
Query: 256 AACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKV 315
AC+N +L G+ IHS + N + +++I MYAKCG + A RVF + ++ +
Sbjct: 494 KACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVF-DSMPEKNL 552
Query: 316 WPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNAC 360
W AMI G+A +G EA+K+ +M+ E + F +L+ C
Sbjct: 553 VSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTC 597
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 174/392 (44%), Gaps = 36/392 (9%)
Query: 34 KQTHAQLVTTALISHHVSANKFLKLVADASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSP 93
+Q H +V + + V ++ L+ A + FD + + D+ + +I A S
Sbjct: 204 RQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKG 263
Query: 94 SSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFV 153
M +L + PN ++ AC +++ G QV S VK + ++VFV
Sbjct: 264 HGIKAIGMFIGML--NHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFV 321
Query: 154 VNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDV 213
+L+ MY K G +S +++FD M ++
Sbjct: 322 GTSLMDMYAK-------------------------------CGEISDCRKVFDGMSNRNT 350
Query: 214 VSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSF 273
V+W++IIA + + G EA+ F M + N T VS L AC ++ AL GK +H+
Sbjct: 351 VTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQ 410
Query: 274 IGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSE 333
I + I+ N + ++++ +Y KCGE A V + R V W AMI G + G SE
Sbjct: 411 IIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVL-QQLPSRDVVSWTAMISGCSSLGHESE 469
Query: 334 AIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMV 393
A+ ++M E V PN T+ + L AC++ + G+ + ++ + + ++
Sbjct: 470 ALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHA-LSNVFVGSALI 528
Query: 394 DLLSRAGLLKEAEDMISSMPMAPDVAIWGAVL 425
+ ++ G + EA + SMP ++ W A++
Sbjct: 529 HMYAKCGFVSEAFRVFDSMP-EKNLVSWKAMI 559
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 125/253 (49%), Gaps = 11/253 (4%)
Query: 179 DKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHR 238
D+ +Y N +I++ V G++ A+++FD M E++ V+W+ +I GY++ G EA F
Sbjct: 114 DQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFED 173
Query: 239 MLQVGPK-PNEYTFVSALAACSNLVALDQGKWIHSF---IGRGEIKMNERLLASIIDMYA 294
++ G + NE FV L CS + G+ +H +G G + + +S++ YA
Sbjct: 174 YVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVE----SSLVYFYA 229
Query: 295 KCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFV 354
+CGE+ SA R F + ++ V W A+I + G +AI +F M PN+ T
Sbjct: 230 QCGELTSALRAF-DMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVC 288
Query: 355 ALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPM 414
++L ACS + G+ L+V I ++ ++D+ ++ G + + + M
Sbjct: 289 SILKACSEEKALRFGRQVHSLVVKRM-IKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSN 347
Query: 415 APDVAIWGAVLNA 427
V W +++ A
Sbjct: 348 RNTVT-WTSIIAA 359
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 114/252 (45%), Gaps = 38/252 (15%)
Query: 20 LASLVDTCKSIQQI---KQTHAQLVTTALISHHVSANKFLKLVADASLSY-AHKLFDQIP 75
+ S++ C S+ + K+ HAQ++ ++ + + + L S A + Q+P
Sbjct: 388 VVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLP 447
Query: 76 QPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEG 135
D+ + MI S S +++L + + ++ G+ PN +++ AC N S+ G
Sbjct: 448 SRDVVSWTAMISGCS-SLGHESEALDFLKEMIQE-GVEPNPFTYSSALKACANSESLLIG 505
Query: 136 EQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGS 195
+ S A K SNVFV +ALI MY K G V
Sbjct: 506 RSIHSIAKKNHALSNVFVGSALIHMYAKCGFV---------------------------- 537
Query: 196 GNMSQAKELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSAL 255
S+A +FD M E+++VSW +I GY + G EAL +RM G + ++Y F + L
Sbjct: 538 ---SEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATIL 594
Query: 256 AACSNLVALDQG 267
+ C + + LD+
Sbjct: 595 STCGD-IELDEA 605
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 179/373 (47%), Gaps = 53/373 (14%)
Query: 79 LFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNG-LSVQEGEQ 137
++ ++ +I A+ S +++ VF + ++ GL PN ++ ACG G + ++ +
Sbjct: 268 VYAFSALISAYGRS-GLHEEAISVFNSM-KEYGLRPNLVTYNAVIDACGKGGMEFKQVAK 325
Query: 138 VRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFE----WAVDKDLYSWNTMIAAYV 193
+ G+ + N+L+ + + GL E R +F+ +++D++S+NT++ A
Sbjct: 326 FFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAIC 385
Query: 194 GSGNMSQAKELFDEMQEQ----DVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEY 249
G M A E+ +M + +VVS+ST+I G+ + G F EAL+ F M +G
Sbjct: 386 KGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLG------ 439
Query: 250 TFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEH 309
+ALD+ + +++ +Y K G E A + E
Sbjct: 440 ------------IALDRVSY-----------------NTLLSIYTKVGRSEEALDILREM 470
Query: 310 NA---KRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMV 366
+ K+ V +NA++GG+ GK E KVF +MK E+V PN +T+ L++ S G +
Sbjct: 471 ASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLY 530
Query: 367 EEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMP---MAPDVAIWGA 423
+E FR S G+ ++ Y ++D L + GL+ A +I M ++P+V + +
Sbjct: 531 KEAMEIFREFKS-AGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNS 589
Query: 424 VLNACRIYKDMER 436
+++A M+R
Sbjct: 590 IIDAFGRSATMDR 602
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 144/336 (42%), Gaps = 43/336 (12%)
Query: 153 VVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQD 212
+ +A+I G++G V +++FE A G GN
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAG-------------GYGNT-------------- 267
Query: 213 VVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSN-LVALDQGKWIH 271
V ++S +I+ Y + G EA+ F+ M + G +PN T+ + + AC + Q
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFF 327
Query: 272 SFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKR---KVWPWNAMIGGFAMH 328
+ R ++ + S++ + ++ G E+A +F E +R V+ +N ++
Sbjct: 328 DEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKG 387
Query: 329 GKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEH 388
G+ A ++ +M V+ + PN V++ +++ + +E F M GI +
Sbjct: 388 GQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEM-RYLGIALDRVS 446
Query: 389 YGCMVDLLSRAGLLKEAEDMISSMP---MAPDVAIWGAVLNACRIYKDMERGYRIGRIIK 445
Y ++ + ++ G +EA D++ M + DV + A+L Y + + ++
Sbjct: 447 YNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGG---YGKQGKYDEVKKVFT 503
Query: 446 EMDPNHVGCHVL----LGNIYSSSGRWNDA-RMLRE 476
EM HV ++L L + YS G + +A + RE
Sbjct: 504 EMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFRE 539
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 103/217 (47%), Gaps = 11/217 (5%)
Query: 265 DQGKWIHSFIGRGEIKMNE--RLLASIIDMYAKCGEIESASRVF---WEHNAKRKVWPWN 319
D+ + F + E + NE +L +++I + G++ A R+F + V+ ++
Sbjct: 213 DKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFS 272
Query: 320 AMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSD 379
A+I + G EAI VF MK + PN VT+ A+++AC G M + F +
Sbjct: 273 ALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQR 332
Query: 380 YGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMP---MAPDVAIWGAVLNACRIYKDMER 436
G+ P+ + ++ + SR GL + A ++ M + DV + +L+A M+
Sbjct: 333 NGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDL 392
Query: 437 GYRI--GRIIKEMDPNHVGCHVLLGNIYSSSGRWNDA 471
+ I +K + PN V ++ ++ +GR+++A
Sbjct: 393 AFEILAQMPVKRIMPNVVSYSTVIDG-FAKAGRFDEA 428
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 119/459 (25%), Positives = 208/459 (45%), Gaps = 28/459 (6%)
Query: 61 DASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSF- 119
D +LS H P + YN ++ A S + + + VF+ + +S +SPN +++
Sbjct: 151 DKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEML-ESQVSPNVFTYN 209
Query: 120 VFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEW--- 176
+ G C G ++ + G NV N LI Y K ++ G K+
Sbjct: 210 ILIRGFCFAG-NIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMAL 268
Query: 177 -AVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQ----DVVSWSTIIAGYVQVGCFME 231
++ +L S+N +I G M + + EM + D V+++T+I GY + G F +
Sbjct: 269 KGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQ 328
Query: 232 ALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQG-KWIHSFIGRGEIKMNERLLASII 290
AL ML+ G P+ T+ S + + +++ +++ RG + NER +++
Sbjct: 329 ALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG-LCPNERTYTTLV 387
Query: 291 DMYAKCGEIESASRVFWEHNAK---RKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVS 347
D +++ G + A RV E N V +NA+I G + GK +AI V + MK + +S
Sbjct: 388 DGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLS 447
Query: 348 PNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAED 407
P+ V++ +L+ Y V+E R MV + GI P+ Y ++ KEA D
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKREMV-EKGIKPDTITYSSLIQGFCEQRRTKEACD 506
Query: 408 MISSM---PMAPDVAIWGAVLNACRIYKDMERGYRIGR--IIKEMDPNHVGCHVLLGNIY 462
+ M + PD + A++NA + D+E+ ++ + K + P+ V VL+ +
Sbjct: 507 LYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLN 566
Query: 463 SSSGRWNDARML----REKSEISTAT--KKIPGCSSIEL 495
S R+L E+S S T I CS+IE
Sbjct: 567 KQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEF 605
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 143/331 (43%), Gaps = 29/331 (8%)
Query: 77 PDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGE 136
P + Y ++I HS+ + + M F R GL PN ++ + E
Sbjct: 343 PSVITYTSLI--HSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAY 400
Query: 137 QVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDK----DLYSWNTMIAAY 192
+V G +V NALI + G +E V E +K D+ S++T+++ +
Sbjct: 401 RVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGF 460
Query: 193 VGSGNMSQAKELFDEMQEQ----DVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNE 248
S ++ +A + EM E+ D +++S++I G+ + EA D + ML+VG P+E
Sbjct: 461 CRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDE 520
Query: 249 YTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRV--- 305
+T+ + + A L++ +H+ + + + + +I+ K A R+
Sbjct: 521 FTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLK 580
Query: 306 -FWEHNAKRKVWPWN--------------AMIGGFAMHGKPSEAIKVFQKMKVENVSPNK 350
F+E + V ++I GF M G +EA +VF+ M +N P+
Sbjct: 581 LFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDG 640
Query: 351 VTFVALLNA-CSHGYMVEEGKLYFRLMVSDY 380
+ +++ C G + + LY ++ S +
Sbjct: 641 TAYNIMIHGHCRAGDIRKAYTLYKEMVKSGF 671
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
Query: 488 PGCSSIELNGTFYQFLVGDRSHPQSR-ELYSFLDEMTTKLKIAGYVPVFGXXXXXXXXXX 546
P S ++ G + G++ R + Y L + +++ AGYVP
Sbjct: 104 PSSHSTKVRGDKPEISGGEKKAIVDRSKAYVKLKSLGKEVRDAGYVPET-KYVLHDIDEE 162
Query: 547 XXXTALSVHSEKLAIAFGLLNTAPGTPIRIVKNLRVCRDCHQVTKFISKVYDRVIIVRDR 606
AL HSE+LAIAFG++NT PGT IR++KNLR+C DCH K +S + DR IIVRD
Sbjct: 163 AKEKALMHHSERLAIAFGIINTPPGTTIRVMKNLRICGDCHNFIKILSSIEDREIIVRDN 222
Query: 607 TRYHHFKDGICSCKDYW 623
R+HHF+DG CSC DYW
Sbjct: 223 KRFHHFRDGNCSCGDYW 239
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 163/381 (42%), Gaps = 53/381 (13%)
Query: 43 TALISHHVSANKFLKLVADASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMV 102
T+LIS ++ ++ + V + K+ + +P L YN ++ + N +
Sbjct: 212 TSLISAFANSGRYREAV-----NVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSL 266
Query: 103 FRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYG 162
+ D G++P+ Y++ C G QE QV G + NAL+ +YG
Sbjct: 267 VEKMKSD-GIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYG 325
Query: 163 KWGLVEYGRKVFEWAV----DKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQ----DVV 214
K + KV V + ++N++I+AY G + +A EL ++M E+ DV
Sbjct: 326 KSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVF 385
Query: 215 SWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFI 274
+++T+++G+ + G A+ F M G KPN TF
Sbjct: 386 TYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTF----------------------- 422
Query: 275 GRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNA---KRKVWPWNAMIGGFAMHGKP 331
+ I MY G+ ++F E N + WN ++ F +G
Sbjct: 423 ------------NAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMD 470
Query: 332 SEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGC 391
SE VF++MK P + TF L++A S E+ +R M+ D G+ P++ Y
Sbjct: 471 SEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRML-DAGVTPDLSTYNT 529
Query: 392 MVDLLSRAGLLKEAEDMISSM 412
++ L+R G+ +++E +++ M
Sbjct: 530 VLAALARGGMWEQSEKVLAEM 550
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/470 (21%), Positives = 192/470 (40%), Gaps = 35/470 (7%)
Query: 17 CCRLASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVADA-SLSYAHKLFDQIP 75
CC+ SL Q+ Q ++ V+ N L + + A K+ +++
Sbjct: 288 CCKRGSLH------QEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMV 341
Query: 76 ----QPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLS 131
P + YN++I A++ D M + + G P+ +++
Sbjct: 342 LNGFSPSIVTYNSLISAYARD--GMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGK 399
Query: 132 VQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEW----AVDKDLYSWNT 187
V+ + G N+ NA I MYG G K+F+ + D+ +WNT
Sbjct: 400 VESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNT 459
Query: 188 MIAAYVGSGNMSQAKELFDEMQEQDVV----SWSTIIAGYVQVGCFMEALDFFHRMLQVG 243
++A + +G S+ +F EM+ V +++T+I+ Y + G F +A+ + RML G
Sbjct: 460 LLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAG 519
Query: 244 PKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEI---- 299
P+ T+ + LAA + +Q + + + + G K NE S++ YA EI
Sbjct: 520 VTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMH 579
Query: 300 ESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNA 359
A V+ R V ++ P EA + F ++K SP+ T ++++
Sbjct: 580 SLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLP-EAERAFSELKERGFSPDITTLNSMVSI 638
Query: 360 CSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSM---PMAP 416
MV + M + G P + Y ++ + SR+ ++E+++ + + P
Sbjct: 639 YGRRQMVAKANGVLDYM-KERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKP 697
Query: 417 DVAIWGAVLNA-CRIYKDMERGYRIGRIIKEMDPNHVGCHVLLGNIYSSS 465
D+ + V+ A CR R RI EM + + V+ N + S
Sbjct: 698 DIISYNTVIYAYCR----NTRMRDASRIFSEMRNSGIVPDVITYNTFIGS 743
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 123/288 (42%), Gaps = 16/288 (5%)
Query: 153 VVNALIGMYGKWGLVEYGRKVF----EWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEM 208
VV +I M GK G V +F E D+YS+ ++I+A+ SG +A +F +M
Sbjct: 175 VVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKM 234
Query: 209 QEQ----DVVSWSTIIAGYVQVGC-FMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVA 263
+E +++++ I+ + ++G + + +M G P+ YT+ + + C
Sbjct: 235 EEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSL 294
Query: 264 LDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWE---HNAKRKVWPWNA 320
+ + + ++ +++D+Y K + A +V E + + +N+
Sbjct: 295 HQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNS 354
Query: 321 MIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDY 380
+I +A G EA+++ +M + P+ T+ LL+ VE F M +
Sbjct: 355 LISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEM-RNA 413
Query: 381 GIIPEIEHYGCMVDLLSRAGLLKEAE---DMISSMPMAPDVAIWGAVL 425
G P I + + + G E D I+ ++PD+ W +L
Sbjct: 414 GCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLL 461
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/387 (18%), Positives = 157/387 (40%), Gaps = 29/387 (7%)
Query: 53 NKFLKLVAD-ASLSYAHKLFDQIP----QPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLT 107
N F+K+ + + K+FD+I PD+ +NT++ + S VF+ +
Sbjct: 423 NAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVS-GVFKEMK 481
Query: 108 RDSGLSPNRYSF---VFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKW 164
R +G P R +F + + CG S ++ V + G+ ++ N ++ +
Sbjct: 482 R-AGFVPERETFNTLISAYSRCG---SFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARG 537
Query: 165 GLVEYGRKVFEWAVD----KDLYSWNTMIAAYVGSGNM----SQAKELFDEMQEQDVVSW 216
G+ E KV D + ++ +++ AY + S A+E++ + E V
Sbjct: 538 GMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLL 597
Query: 217 STIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGR 276
T++ + EA F + + G P+ T S ++ + + + ++
Sbjct: 598 KTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKE 657
Query: 277 GEIKMNERLLASIIDMYAKCGEIESASRVFWE---HNAKRKVWPWNAMIGGFAMHGKPSE 333
+ S++ M+++ + + + E K + +N +I + + + +
Sbjct: 658 RGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRD 717
Query: 334 AIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMV 393
A ++F +M+ + P+ +T+ + + + M EE R M+ +G P Y +V
Sbjct: 718 ASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIK-HGCRPNQNTYNSIV 776
Query: 394 DLLSRAGLLKEA----EDMISSMPMAP 416
D + EA ED+ + P AP
Sbjct: 777 DGYCKLNRKDEAKLFVEDLRNLDPHAP 803
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 15/208 (7%)
Query: 281 MNERLLASIIDMYAKCGEIESASRVF---WEHNAKRKVWPWNAMIGGFAMHGKPSEAIKV 337
++ ++A II M K G + SA+ +F E V+ + ++I FA G+ EA+ V
Sbjct: 171 LDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNV 230
Query: 338 FQKMKVENVSPNKVTFVALLNACSH-GYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLL 396
F+KM+ + P +T+ +LN G + M SD GI P+ Y ++
Sbjct: 231 FKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSD-GIAPDAYTYNTLITCC 289
Query: 397 SRAGLLKEAEDMISSMPMAP---DVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVG 453
R L +EA + M A D + A+L+ +Y R +++ EM N
Sbjct: 290 KRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLD---VYGKSHRPKEAMKVLNEMVLNGFS 346
Query: 454 CHVLLGN----IYSSSGRWNDARMLREK 477
++ N Y+ G ++A L+ +
Sbjct: 347 PSIVTYNSLISAYARDGMLDEAMELKNQ 374
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 168/351 (47%), Gaps = 30/351 (8%)
Query: 146 GLDSNVFVVNALIGMYGKWGLVEYGRKVF--EWAV--DKDLYSWNTMIAAYVGSGNMSQA 201
G++ +++ + +I Y + + + V W + + D +++T++ + G +S+A
Sbjct: 100 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 159
Query: 202 KELFDEM----QEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSAL-- 255
L D M Q D+V+ ST+I G G EAL RM++ G +P+E T+ L
Sbjct: 160 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNR 219
Query: 256 --AACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWE---HN 310
+ ++ +ALD + + IK + + +ID K G + A +F E
Sbjct: 220 LCKSGNSALALDLFRKME----ERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275
Query: 311 AKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNA-CSHGYMVEEG 369
K V ++++IGG GK + K+ ++M N+ P+ VTF AL++ G ++E
Sbjct: 276 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 335
Query: 370 KLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAE---DMISSMPMAPDVAIWGAVLN 426
+LY ++ GI P+ Y ++D + L EA D++ S PD+ + ++N
Sbjct: 336 ELYNEMITR--GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILIN 393
Query: 427 ACRIYKDMERGYRIGRII--KEMDPNHVGCHVL-LGNIYSSSGRWNDARML 474
+ K ++ G R+ R I K + PN + + L LG + SG+ N A+ L
Sbjct: 394 SYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLG--FCQSGKLNAAKEL 442
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/370 (21%), Positives = 169/370 (45%), Gaps = 25/370 (6%)
Query: 76 QPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEG 135
QPD Y ++ S +S + ++ R+ S +YS V C +G S +
Sbjct: 207 QPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVID-SLCKDG-SFDDA 264
Query: 136 EQVRSHAVKVGLDSNVFVVNALIGMY---GKWGLVEYGRKVFEWAVDK----DLYSWNTM 188
+ + G+ ++V ++LIG GKW + G K+ + + D+ +++ +
Sbjct: 265 LSLFNEMEMKGIKADVVTYSSLIGGLCNDGKW---DDGAKMLREMIGRNIIPDVVTFSAL 321
Query: 189 IAAYVGSGNMSQAKELFDEMQEQ----DVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGP 244
I +V G + +AKEL++EM + D ++++++I G+ + C EA F M+ G
Sbjct: 322 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC 381
Query: 245 KPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASR 304
+P+ T+ + + +D G + I + N +++ + + G++ +A
Sbjct: 382 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE 441
Query: 305 VFWEHNAKRKVWP----WNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNAC 360
+F E R V P + ++ G +G+ ++A+++F+KM+ ++ + +++
Sbjct: 442 LFQEM-VSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGM 500
Query: 361 SHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMP---MAPD 417
+ V++ F +SD G+ P++ Y M+ L + G L EA+ + M PD
Sbjct: 501 CNASKVDDAWSLF-CSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPD 559
Query: 418 VAIWGAVLNA 427
+ ++ A
Sbjct: 560 DFTYNILIRA 569
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/375 (21%), Positives = 161/375 (42%), Gaps = 32/375 (8%)
Query: 58 LVADASLSYAHKLFDQIP----QPDLFIYNTMIKAHSLSPSSCND------SLMVFRLLT 107
L D S A LF+++ + D+ Y+++I CND + M+ ++
Sbjct: 255 LCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL------CNDGKWDDGAKMLREMIG 308
Query: 108 RDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLV 167
R+ + P+ +F + E +++ + + G+ + N+LI + K +
Sbjct: 309 RN--IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCL 366
Query: 168 EYGRKVFEWAVDK----DLYSWNTMIAAYVGSGNMSQAKELFDEMQEQ----DVVSWSTI 219
++F+ V K D+ +++ +I +Y + + LF E+ + + ++++T+
Sbjct: 367 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 426
Query: 220 IAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEI 279
+ G+ Q G A + F M+ G P+ T+ L + L++ I + + +
Sbjct: 427 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 486
Query: 280 KMNERLLASIIDMYAKCGEIESASRVFW---EHNAKRKVWPWNAMIGGFAMHGKPSEAIK 336
+ + II +++ A +F + K V +N MIGG G SEA
Sbjct: 487 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADM 546
Query: 337 VFQKMKVENVSPNKVTFVALLNACSHGY-MVEEGKLYFRLMVSDYGIIPEIEHYGCMVDL 395
+F+KMK + +P+ T+ L+ A G ++ +L + V G + ++D+
Sbjct: 547 LFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVC--GFSADSSTIKMVIDM 604
Query: 396 LSRAGLLKEAEDMIS 410
LS L K DM+S
Sbjct: 605 LSDRRLDKSFLDMLS 619
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 116/267 (43%), Gaps = 35/267 (13%)
Query: 231 EALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGE---IKMNERLLA 287
+A+D F M+Q P P F CS + Q + F E I+ + +
Sbjct: 53 DAIDLFESMIQSRPLPTPIDFNR---LCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 288 SIIDMYAKCGEIESASRVF---WEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVE 344
+I+ Y + ++ A V W+ + ++ ++ GF + G+ SEA+ + +M
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 345 NVSPNKVTFVALLNA-CSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLK 403
P+ VT L+N C G + E L R++ +YG P+ YG +++ L ++G
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMV--EYGFQPDEVTYGPVLNRLCKSGNSA 227
Query: 404 EAEDMISSMP---MAPDVAIWGAVL----------NACRIYKDMERGYRIGRIIKEMDPN 450
A D+ M + V + V+ +A ++ +ME +K + +
Sbjct: 228 LALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEME--------MKGIKAD 279
Query: 451 HVGCHVLLGNIYSSSGRWND-ARMLRE 476
V L+G + + G+W+D A+MLRE
Sbjct: 280 VVTYSSLIGGL-CNDGKWDDGAKMLRE 305
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 174/375 (46%), Gaps = 25/375 (6%)
Query: 74 IPQPDLFIYNTMIKAHSLSPS-SCNDSLM-VFRLLT---RDSGLSPNRYSFVFT----FG 124
+ DL + ++I + P + DS + F LL +D G P + F FG
Sbjct: 130 VASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFG 189
Query: 125 ACGNGLSVQEGEQVRSHAVKVGLDS-NVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLY 183
V E++ ++ + + +DS NV++ Y + R+ E V ++
Sbjct: 190 LLREARRV--FEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVA 247
Query: 184 SWNTMIAAYVGSGNMSQAKELFDEMQEQ----DVVSWSTIIAGYVQVGCFMEALDFFHRM 239
S+N +I G + +A L M+ + DV+S+ST++ GY + G + M
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 240 LQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEI 299
+ G KPN Y + S + + L + + S + R I + + ++ID + K G+I
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 300 ESASRVFWEHNAKR---KVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVAL 356
+AS+ F+E +++ V + A+I GF G EA K+F +M + + P+ VTF L
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 357 LNA-CSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSM--- 412
+N C G+M + +++ ++ + G P + Y ++D L + G L A +++ M
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQA--GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 413 PMAPDVAIWGAVLNA 427
+ P++ + +++N
Sbjct: 486 GLQPNIFTYNSIVNG 500
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 164/385 (42%), Gaps = 29/385 (7%)
Query: 77 PDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGE 136
PD+ Y+T++ + D + + + GL PN Y + G + E E
Sbjct: 279 PDVISYSTVVNGYCRFGEL--DKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 336
Query: 137 QVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVF----EWAVDKDLYSWNTMIAAY 192
+ S ++ G+ + V LI + K G + K F + D+ ++ +I+ +
Sbjct: 337 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 396
Query: 193 VGSGNMSQAKELFDEM----QEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNE 248
G+M +A +LF EM E D V+++ +I GY + G +A + M+Q G PN
Sbjct: 397 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
Query: 249 YTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWE 308
T+ + + LD + + + ++ N SI++ K G IE A ++ E
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 309 HNA---KRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNA-CSHGY 364
A + ++ + G+ +A ++ ++M + + P VTF L+N C HG
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG- 575
Query: 365 MVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSM---PMAPDVAIW 421
M+E+G+ M++ GI P + +V LK A + M + PD
Sbjct: 576 MLEDGEKLLNWMLAK-GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD---- 630
Query: 422 GAVLNACRIYKDMERGYRIGRIIKE 446
+ Y+++ +G+ R +KE
Sbjct: 631 ------GKTYENLVKGHCKARNMKE 649
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 151/333 (45%), Gaps = 18/333 (5%)
Query: 35 QTHAQLVTTALISHHVSANKFLKL--VADASLSYAHKLFDQIPQPDLFIYNTMIKAHSLS 92
+ H++ +T ++++ + F ++ + +A + H++F + +PD + +I +
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF-HEMFCKGLEPDSVTFTELINGYC-K 433
Query: 93 PSSCNDSLMVFRLLTRDSGLSPNRYSFVFTF-GACGNGLSVQEGEQVRSHAVKVGLDSNV 151
D+ V + + +G SPN ++ G C G + ++ K+GL N+
Sbjct: 434 AGHMKDAFRVHNHMIQ-AGCSPNVVTYTTLIDGLCKEG-DLDSANELLHEMWKIGLQPNI 491
Query: 152 FVVNALIGMYGKWGLVEYGRKV---FEWA-VDKDLYSWNTMIAAYVGSGNMSQAKELFDE 207
F N+++ K G +E K+ FE A ++ D ++ T++ AY SG M +A+E+ E
Sbjct: 492 FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKE 551
Query: 208 MQ----EQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVA 263
M + +V+++ ++ G+ G + + ML G PN TF S +
Sbjct: 552 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 611
Query: 264 LDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKR---KVWPWNA 320
L I+ + + + + +++ + K ++ A +F E K V ++
Sbjct: 612 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 671
Query: 321 MIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTF 353
+I GF K EA +VF +M+ E ++ +K F
Sbjct: 672 LIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 174/375 (46%), Gaps = 25/375 (6%)
Query: 74 IPQPDLFIYNTMIKAHSLSPS-SCNDSLM-VFRLLT---RDSGLSPNRYSFVFT----FG 124
+ DL + ++I + P + DS + F LL +D G P + F FG
Sbjct: 130 VASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFG 189
Query: 125 ACGNGLSVQEGEQVRSHAVKVGLDS-NVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLY 183
V E++ ++ + + +DS NV++ Y + R+ E V ++
Sbjct: 190 LLREARRV--FEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVA 247
Query: 184 SWNTMIAAYVGSGNMSQAKELFDEMQEQ----DVVSWSTIIAGYVQVGCFMEALDFFHRM 239
S+N +I G + +A L M+ + DV+S+ST++ GY + G + M
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 240 LQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEI 299
+ G KPN Y + S + + L + + S + R I + + ++ID + K G+I
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 300 ESASRVFWEHNAKR---KVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVAL 356
+AS+ F+E +++ V + A+I GF G EA K+F +M + + P+ VTF L
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 357 LNA-CSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSM--- 412
+N C G+M + +++ ++ + G P + Y ++D L + G L A +++ M
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQA--GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 413 PMAPDVAIWGAVLNA 427
+ P++ + +++N
Sbjct: 486 GLQPNIFTYNSIVNG 500
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 164/385 (42%), Gaps = 29/385 (7%)
Query: 77 PDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGE 136
PD+ Y+T++ + D + + + GL PN Y + G + E E
Sbjct: 279 PDVISYSTVVNGYCRFGEL--DKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 336
Query: 137 QVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVF----EWAVDKDLYSWNTMIAAY 192
+ S ++ G+ + V LI + K G + K F + D+ ++ +I+ +
Sbjct: 337 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 396
Query: 193 VGSGNMSQAKELFDEM----QEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNE 248
G+M +A +LF EM E D V+++ +I GY + G +A + M+Q G PN
Sbjct: 397 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
Query: 249 YTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWE 308
T+ + + LD + + + ++ N SI++ K G IE A ++ E
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 309 HNA---KRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNA-CSHGY 364
A + ++ + G+ +A ++ ++M + + P VTF L+N C HG
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG- 575
Query: 365 MVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSM---PMAPDVAIW 421
M+E+G+ M++ GI P + +V LK A + M + PD
Sbjct: 576 MLEDGEKLLNWMLAK-GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD---- 630
Query: 422 GAVLNACRIYKDMERGYRIGRIIKE 446
+ Y+++ +G+ R +KE
Sbjct: 631 ------GKTYENLVKGHCKARNMKE 649
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 151/333 (45%), Gaps = 18/333 (5%)
Query: 35 QTHAQLVTTALISHHVSANKFLKL--VADASLSYAHKLFDQIPQPDLFIYNTMIKAHSLS 92
+ H++ +T ++++ + F ++ + +A + H++F + +PD + +I +
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF-HEMFCKGLEPDSVTFTELINGYC-K 433
Query: 93 PSSCNDSLMVFRLLTRDSGLSPNRYSFVFTF-GACGNGLSVQEGEQVRSHAVKVGLDSNV 151
D+ V + + +G SPN ++ G C G + ++ K+GL N+
Sbjct: 434 AGHMKDAFRVHNHMIQ-AGCSPNVVTYTTLIDGLCKEG-DLDSANELLHEMWKIGLQPNI 491
Query: 152 FVVNALIGMYGKWGLVEYGRKV---FEWA-VDKDLYSWNTMIAAYVGSGNMSQAKELFDE 207
F N+++ K G +E K+ FE A ++ D ++ T++ AY SG M +A+E+ E
Sbjct: 492 FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKE 551
Query: 208 MQ----EQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVA 263
M + +V+++ ++ G+ G + + ML G PN TF S +
Sbjct: 552 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 611
Query: 264 LDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKR---KVWPWNA 320
L I+ + + + + +++ + K ++ A +F E K V ++
Sbjct: 612 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 671
Query: 321 MIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTF 353
+I GF K EA +VF +M+ E ++ +K F
Sbjct: 672 LIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 173/381 (45%), Gaps = 19/381 (4%)
Query: 61 DASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFV 120
D +LS K+ +P + IYNT+I A + + ND+L +F + + G+ PN ++
Sbjct: 238 DLALSLLKKMEQGKIEPGVVIYNTIIDALC-NYKNVNDALNLFTEMD-NKGIRPNVVTYN 295
Query: 121 FTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFE----W 176
N + ++ S ++ ++ NV +ALI + K G + K+++
Sbjct: 296 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 355
Query: 177 AVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQD----VVSWSTIIAGYVQVGCFMEA 232
++D D+++++++I + + +AK +F+ M +D VV+++T+I G+ + E
Sbjct: 356 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEG 415
Query: 233 LDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDM 292
++ F M Q G N T+ + + D + + + + + + ++D
Sbjct: 416 MELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDG 475
Query: 293 YAKCGEIESASRVFWEHNAKRKVWP----WNAMIGGFAMHGKPSEAIKVFQKMKVENVSP 348
G++E+A VF E+ + K+ P +N MI G GK + +F + ++ V P
Sbjct: 476 LCNNGKVETALVVF-EYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 534
Query: 349 NKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDM 408
N VT+ +++ + EE FR M + G +P+ Y ++ R G + ++
Sbjct: 535 NVVTYTTMMSGFCRKGLKEEADALFREM-KEEGPLPDSGTYNTLIRAHLRDGDKAASAEL 593
Query: 409 ISSM---PMAPDVAIWGAVLN 426
I M D + G V N
Sbjct: 594 IREMRSCRFVGDASTIGLVTN 614
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/390 (20%), Positives = 171/390 (43%), Gaps = 27/390 (6%)
Query: 59 VADASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYS 118
++DA +S ++ + QPD F +NT+I + +V R++ + G P+
Sbjct: 167 ISDA-VSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVK--GCQPD--- 220
Query: 119 FVFTFGACGNGL----SVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVF 174
+ T+G NGL + + + ++ V + N +I + V +F
Sbjct: 221 -LVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLF 279
Query: 175 EWAVDK----DLYSWNTMIAAYVGSGNMSQAKELFDEMQEQ----DVVSWSTIIAGYVQV 226
+K ++ ++N++I G S A L +M E+ +VV++S +I +V+
Sbjct: 280 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 339
Query: 227 GCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLL 286
G +EA + M++ P+ +T+ S + LD+ K + + + N
Sbjct: 340 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 399
Query: 287 ASIIDMYAKCGEIESASRVFWEHNAKRKVW---PWNAMIGGFAMHGKPSEAIKVFQKMKV 343
++I + K ++ +F E + + V + +I GF + A VF++M
Sbjct: 400 NTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVS 459
Query: 344 ENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLK 403
+ V P+ +T+ LL+ + VE + F + + P+I Y M++ + +AG ++
Sbjct: 460 DGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS-KMEPDIYTYNIMIEGMCKAGKVE 518
Query: 404 EAEDMISSMPM---APDVAIWGAVLNA-CR 429
+ D+ S+ + P+V + +++ CR
Sbjct: 519 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 548
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 139/324 (42%), Gaps = 28/324 (8%)
Query: 124 GACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWA-VDK-- 180
G C +G + + + V++G + F N LI GL + R A VD+
Sbjct: 160 GFC-HGNRISDAVSLVGQMVEMGYQPDSFTFNTLI-----HGLFRHNRASEAVALVDRMV 213
Query: 181 ------DLYSWNTMIAAYVGSGNMSQAKELFDEMQ----EQDVVSWSTIIAGYVQVGCFM 230
DL ++ ++ G++ A L +M+ E VV ++TII
Sbjct: 214 VKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVN 273
Query: 231 EALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASII 290
+AL+ F M G +PN T+ S + N + S + +I N +++I
Sbjct: 274 DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 333
Query: 291 DMYAKCGEIESASRVFWEHNAKRKVWP----WNAMIGGFAMHGKPSEAIKVFQKMKVENV 346
D + K G++ A +++ E KR + P ++++I GF MH + EA +F+ M ++
Sbjct: 334 DAFVKEGKLVEAEKLYDEM-IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 392
Query: 347 SPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAE 406
PN VT+ L+ V+EG FR M S G++ Y ++ +A A+
Sbjct: 393 FPNVVTYNTLIKGFCKAKRVDEGMELFREM-SQRGLVGNTVTYTTLIHGFFQARECDNAQ 451
Query: 407 DMISSM---PMAPDVAIWGAVLNA 427
+ M + PD+ + +L+
Sbjct: 452 IVFKQMVSDGVLPDIMTYSILLDG 475
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 140/332 (42%), Gaps = 49/332 (14%)
Query: 158 IGMYGKWGLV-EYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQ----EQD 212
I K+ LV G ++ + +LY+++ +I + +S A + +M E D
Sbjct: 91 IAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPD 150
Query: 213 VVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVS-------------ALAACS 259
+V+ ++++ G+ +A+ +M+++G +P+ +TF + A+A
Sbjct: 151 IVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVD 210
Query: 260 NLVA-------LDQGKWIHSFIGRGEIKMNERLLA---------------SIIDMYAKCG 297
+V + G ++ RG+I + LL +IID
Sbjct: 211 RMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYK 270
Query: 298 EIESASRVFWEHNAK---RKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFV 354
+ A +F E + K V +N++I +G+ S+A ++ M ++PN VTF
Sbjct: 271 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 330
Query: 355 ALLNA-CSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSM- 412
AL++A G +VE KLY ++ I P+I Y +++ L EA+ M M
Sbjct: 331 ALIDAFVKEGKLVEAEKLYDEMI--KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 388
Query: 413 --PMAPDVAIWGAVLNACRIYKDMERGYRIGR 442
P+V + ++ K ++ G + R
Sbjct: 389 SKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/410 (22%), Positives = 178/410 (43%), Gaps = 25/410 (6%)
Query: 61 DASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFV 120
D ++ K+ D P + Y +IK SL S + ++G+ PN +++
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTYTVLIK--SLCGSERKSEALNLVKEMEETGIKPNIHTYT 362
Query: 121 FTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDK 180
+ + ++ ++ ++ GL NV NALI Y K G++E V E +
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR 422
Query: 181 DL----YSWNTMIAAYVGSGNMSQAKELFDEMQEQ----DVVSWSTIIAGYVQVGCFMEA 232
L ++N +I Y S N+ +A + ++M E+ DVV+++++I G + G F A
Sbjct: 423 KLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA 481
Query: 233 LDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDM 292
M G P+++T+ S + + +++ + + + + N + ++ID
Sbjct: 482 YRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDG 541
Query: 293 YAKCGEIESASRVFWEHNAKRKVWP----WNAMIGGFAMHGKPSEAIKVFQKMKVENVSP 348
Y K G+++ A + E + P +NA+I G GK EA + +KM + P
Sbjct: 542 YCKAGKVDEA-HLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQP 600
Query: 349 NKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDM 408
T L++ + F+ M+S G P+ Y + R G L +AEDM
Sbjct: 601 TVSTDTILIHRLLKDGDFDHAYSRFQQMLSS-GTKPDAHTYTTFIQTYCREGRLLDAEDM 659
Query: 409 ISSMP---MAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCH 455
++ M ++PD+ + +++ Y D+ + ++K M GC
Sbjct: 660 MAKMRENGVSPDLFTYSSLIKG---YGDLGQTNFAFDVLKRM--RDTGCE 704
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 107/479 (22%), Positives = 207/479 (43%), Gaps = 72/479 (15%)
Query: 66 YAHKLFDQIPQPDLFIYN----TMIKAHSLSPSSCN---DSLMVF---RLLTRDSGLSPN 115
Y H ++ L I N + K L SC+ D+L V R + +D
Sbjct: 119 YKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFELK 178
Query: 116 RYSFVFTFGACGNGLS----VQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVE--- 168
+ + N L+ V E +QV ++ + N++ N ++ Y K G VE
Sbjct: 179 YKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEAN 238
Query: 169 -YGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQ----EQDVVSWSTIIAG- 222
Y K+ E +D D +++ ++I Y ++ A ++F+EM ++ V+++ +I G
Sbjct: 239 QYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGL 298
Query: 223 ------------YVQVG---CF-------------------MEALDFFHRMLQVGPKPNE 248
+V++ CF EAL+ M + G KPN
Sbjct: 299 CVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNI 358
Query: 249 YTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWE 308
+T+ + + + ++ + + + + N ++I+ Y K G IE A V E
Sbjct: 359 HTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVV-E 417
Query: 309 HNAKRKVWP----WNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNA-CSHG 363
RK+ P +N +I G+ +A+ V KM V P+ VT+ +L++ C G
Sbjct: 418 LMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSG 476
Query: 364 YMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMP---MAPDVAI 420
+L +++D G++P+ Y M+D L ++ ++EA D+ S+ + P+V +
Sbjct: 477 NFDSAYRLLS--LMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVM 534
Query: 421 WGAVLNA-CRIYKDMERGYRIGRII-KEMDPNHVGCHVLLGNIYSSSGRWNDARMLREK 477
+ A+++ C+ K E + +++ K PN + + L+ + + G+ +A +L EK
Sbjct: 535 YTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGL-CADGKLKEATLLEEK 592
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 156/354 (44%), Gaps = 37/354 (10%)
Query: 67 AHKLFDQIPQ----PDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSF-VF 121
A LFD + Q P++ +Y +I + + LM+ ++L+++ PN +F
Sbjct: 516 ACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNC--LPNSLTFNAL 573
Query: 122 TFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDK- 180
G C +G ++E + VK+GL V LI K G ++ F+ +
Sbjct: 574 IHGLCADG-KLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG 632
Query: 181 ---DLYSWNTMIAAYVGSGNMSQAKELFDEMQEQ----DVVSWSTIIAGYVQVGCFMEAL 233
D +++ T I Y G + A+++ +M+E D+ ++S++I GY +G A
Sbjct: 633 TKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAF 692
Query: 234 DFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMY 293
D RM G +P+++TF+S + +L+ + GK K +E L ++ +M
Sbjct: 693 DVLKRMRDTGCEPSQHTFLSLI---KHLLEMKYGKQ----------KGSEPELCAMSNMM 739
Query: 294 AKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKM-KVENVSPNKVT 352
+E ++ EH+ + +I G G A KVF M + E +SP+++
Sbjct: 740 EFDTVVELLEKMV-EHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELV 798
Query: 353 FVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAE 406
F ALL+ C E M+ G +P++E ++ GL K+ E
Sbjct: 799 FNALLSCCCKLKKHNEAAKVVDDMIC-VGHLPQLESCKVLI-----CGLYKKGE 846
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 163/370 (44%), Gaps = 60/370 (16%)
Query: 59 VADASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYS 118
V+DA +S K+ + +PD+ YN +I + ND+ F+ + R G+ PN
Sbjct: 171 VSDA-VSLVDKMVEIGYKPDIVAYNAIIDSLC-KTKRVNDAFDFFKEIER-KGIRPN--- 224
Query: 119 FVFTFGACGNGLSVQ----EGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVF 174
V T+ A NGL + ++ S +K + NV +AL+ + K G V +++F
Sbjct: 225 -VVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELF 283
Query: 175 E----WAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQ----DVVSWSTIIAGYVQV 226
E ++D D+ +++++I + +A ++FD M + DVVS++T+I G+ +
Sbjct: 284 EEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKA 343
Query: 227 GCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLL 286
+ + F M Q G N T+
Sbjct: 344 KRVEDGMKLFREMSQRGLVSNTVTY----------------------------------- 368
Query: 287 ASIIDMYAKCGEIESASRVFWEHN---AKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKV 343
++I + + G+++ A F + + +W +N ++GG +G+ +A+ +F+ M+
Sbjct: 369 NTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQK 428
Query: 344 ENVSPNKVTFVALLNA-CSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLL 402
+ + VT+ ++ C G + E L+ L + G+ P+I Y M+ L GLL
Sbjct: 429 REMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK--GLKPDIVTYTTMMSGLCTKGLL 486
Query: 403 KEAEDMISSM 412
E E + + M
Sbjct: 487 HEVEALYTKM 496
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 120/255 (47%), Gaps = 10/255 (3%)
Query: 166 LVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEM----QEQDVVSWSTIIA 221
++ G+K+ + DLY++N +I + +S A + +M E D V+ +++
Sbjct: 104 VISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVN 163
Query: 222 GYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKM 281
G+ + +A+ +M+++G KP+ + + + + ++ I R I+
Sbjct: 164 GFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRP 223
Query: 282 NERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWP----WNAMIGGFAMHGKPSEAIKV 337
N ++++ A+R+ + K+K+ P ++A++ F +GK EA ++
Sbjct: 224 NVVTYTALVNGLCNSSRWSDAARLLSDM-IKKKITPNVITYSALLDAFVKNGKVLEAKEL 282
Query: 338 FQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLS 397
F++M ++ P+ VT+ +L+N ++E F LMVS G + ++ Y +++
Sbjct: 283 FEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK-GCLADVVSYNTLINGFC 341
Query: 398 RAGLLKEAEDMISSM 412
+A +++ + M
Sbjct: 342 KAKRVEDGMKLFREM 356
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 164/344 (47%), Gaps = 20/344 (5%)
Query: 76 QPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEG 135
+P+ + YNT+I A+ + + V +++ +D G+ N+ ++ + +
Sbjct: 256 KPEAYTYNTIINAY-VKQRDFSGVEGVLKVMKKD-GVVYNKVTYTLLMELSVKNGKMSDA 313
Query: 136 EQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDL----YSWNTMIAA 191
E++ + G++S+V V +LI + G ++ +F+ +K L Y++ +I
Sbjct: 314 EKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDG 373
Query: 192 YVGSGNMSQAKELFDEMQEQDV----VSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPN 247
G M A+ L +EMQ + V V ++T+I GY + G EA + M Q G + +
Sbjct: 374 VCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQAD 433
Query: 248 EYTFVSALAACSN-LVALDQGK-WIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRV 305
+T + +A+C N L D+ K W+ + G +K++ ++ID+Y K G +E A R+
Sbjct: 434 VFT-CNTIASCFNRLKRYDEAKQWLFRMM-EGGVKLSTVSYTNLIDVYCKEGNVEEAKRL 491
Query: 306 FWEHNAKRKVWP----WNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACS 361
F E ++K V P +N MI + GK EA K+ M+ + P+ T+ +L++
Sbjct: 492 FVEMSSK-GVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGEC 550
Query: 362 HGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEA 405
V+E F M G+ Y M+ LS+AG EA
Sbjct: 551 IADNVDEAMRLFSEM-GLKGLDQNSVTYTVMISGLSKAGKSDEA 593
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 88/426 (20%), Positives = 181/426 (42%), Gaps = 56/426 (13%)
Query: 98 DSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNAL 157
+ L VF + + GLS + S + A + ++ V G+ V+ + +
Sbjct: 172 EGLRVFDYMVK-KGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIV 230
Query: 158 IGMYGKWGLVEYGRKVFEW----AVDKDLYSWNTMIAAY--------------------- 192
+ + G VE +K+ + + + Y++NT+I AY
Sbjct: 231 VEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGV 290
Query: 193 --------------VGSGNMSQAKELFDEMQEQ----DVVSWSTIIAGYVQVGCFMEALD 234
V +G MS A++LFDEM+E+ DV ++++I+ + G A
Sbjct: 291 VYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFL 350
Query: 235 FFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYA 294
F + + G P+ YT+ + + + + + + + + + + + + ++ID Y
Sbjct: 351 LFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYC 410
Query: 295 KCGEIESASRVF---WEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKV 351
+ G ++ AS ++ + + V+ N + F + EA + +M V + V
Sbjct: 411 RKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTV 470
Query: 352 TFVALLNA-CSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMIS 410
++ L++ C G VEE K F M S G+ P Y M+ + G +KEA + +
Sbjct: 471 SYTNLIDVYCKEGN-VEEAKRLFVEM-SSKGVQPNAITYNVMIYAYCKQGKIKEARKLRA 528
Query: 411 SMP---MAPDVAIWGAVLNACRIYKDMERGYRI--GRIIKEMDPNHVGCHVLLGNIYSSS 465
+M M PD + ++++ I +++ R+ +K +D N V V++ + S +
Sbjct: 529 NMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGL-SKA 587
Query: 466 GRWNDA 471
G+ ++A
Sbjct: 588 GKSDEA 593
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 130/262 (49%), Gaps = 10/262 (3%)
Query: 172 KVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQ----DVVSWSTIIAGYVQVG 227
K+ ++ + D+ + +++I + + A +L +M+E DVV ++TII G ++G
Sbjct: 129 KMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIG 188
Query: 228 CFMEALDFFHRMLQVGPKPNEYTFVSALAA-CSNLVALDQGKWIHSFIGRGEIKMNERLL 286
+A++ F RM + G + + T+ S +A C + D + + + R +I N
Sbjct: 189 LVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR-DIVPNVITF 247
Query: 287 ASIIDMYAKCGEIESASRVFWEHNAK---RKVWPWNAMIGGFAMHGKPSEAIKVFQKMKV 343
++ID++ K G+ A +++ E + V+ +N++I G MHG+ EA ++ M
Sbjct: 248 TAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVT 307
Query: 344 ENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLK 403
+ P+ VT+ L+N V+EG FR M + G++ + Y ++ +AG
Sbjct: 308 KGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM-AQRGLVGDTITYNTIIQGYFQAGRPD 366
Query: 404 EAEDMISSMPMAPDVAIWGAVL 425
A+++ S M P++ + +L
Sbjct: 367 AAQEIFSRMDSRPNIRTYSILL 388
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 162/360 (45%), Gaps = 30/360 (8%)
Query: 40 LVTTALISHHVSANKFLKLVADASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDS 99
+ ++LI+ N+ V DA + K+ + +PD+ IYNT+I S ND+
Sbjct: 140 VTVSSLINGFCQGNR----VFDA-IDLVSKMEEMGFRPDVVIYNTIIDG-SCKIGLVNDA 193
Query: 100 LMVFRLLTRDSGLSPNRYSF-VFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALI 158
+ +F + RD G+ + ++ G C +G +R ++ + NV A+I
Sbjct: 194 VELFDRMERD-GVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR-DIVPNVITFTAVI 251
Query: 159 GMYGKWGLVEYGRKVFE----WAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQ--- 211
++ K G K++E VD D++++N++I G + +AK++ D M +
Sbjct: 252 DVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCL 311
Query: 212 -DVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWI 270
DVV+++T+I G+ + E F M Q G + T+ + + D + I
Sbjct: 312 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEI 371
Query: 271 HSFIGRGEIKMNERLLASIIDMYAKCG--EIESASRVFWEHNAKRK----VWPWNAMIGG 324
S R + + N R + I +Y C +E A V +E+ K + + +N +I G
Sbjct: 372 FS---RMDSRPNIRTYS--ILLYGLCMNWRVEKA-LVLFENMQKSEIELDITTYNIVIHG 425
Query: 325 FAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIP 384
G +A +F+ + + + P+ V++ +++ ++ L +R M D G++P
Sbjct: 426 MCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQED-GLLP 484
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 163/378 (43%), Gaps = 73/378 (19%)
Query: 78 DLFIYNTMIKAHSLSPSSCNDSLM-----VFRLLTRDSGLSPNRYSFVFTFGACGNGLSV 132
++ Y ++IK + C LM VF LL ++ V G C G +
Sbjct: 295 NVVTYTSLIKGY------CKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTG-QI 347
Query: 133 QEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVF----EWAVDKDLYSWNTM 188
++ +V + +++G+ +N + N+LI Y K G + ++F +W++ D +++NT+
Sbjct: 348 RDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTL 407
Query: 189 IAAYVGSGNMSQAKELFDEMQEQDVV----SWSTIIAGYVQVGCFMEALDFFHRMLQVGP 244
+ Y +G + +A +L D+M +++VV +++ ++ GY ++G F + L + ML+ G
Sbjct: 408 VDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGV 467
Query: 245 KPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASR 304
+E + CS L ++ K G+ A +
Sbjct: 468 NADEIS-------CSTL----------------------------LEALFKLGDFNEAMK 492
Query: 305 VFWEHNAKRKVW----PWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNAC 360
WE+ R + N MI G K +EA ++ + + P T+ AL
Sbjct: 493 -LWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQAL---- 547
Query: 361 SHGYMVEEGKLYFRLMVSDY----GIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMP--- 413
SHGY + G L V +Y GI P IE Y ++ + L + D++ +
Sbjct: 548 SHGYY-KVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARG 606
Query: 414 MAPDVAIWGAVLNA-CRI 430
+ P VA +GA++ C I
Sbjct: 607 LTPTVATYGALITGWCNI 624
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 97/224 (43%), Gaps = 18/224 (8%)
Query: 216 WSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSA----LAACSNLVALDQGKWIH 271
+ I+ Y + G AL F M G P+ + S + N VAL +
Sbjct: 158 FDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMI 217
Query: 272 SFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNA----KRKVWPWNAMIGGFAM 327
SF E+ + + +++ Y + G ++ A E + + V +N++I G+AM
Sbjct: 218 SF----EVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAM 273
Query: 328 HGKPSEAIKVFQKMKVENVSPNKVTFVALLNA-CSHGYMVEEGKLYFRLMVSDYGIIPEI 386
G +V + M VS N VT+ +L+ C G M EE + F L+ + ++ +
Sbjct: 274 IGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLM-EEAEHVFELL-KEKKLVADQ 331
Query: 387 EHYGCMVDLLSRAGLLKEA---EDMISSMPMAPDVAIWGAVLNA 427
YG ++D R G +++A D + + + + I +++N
Sbjct: 332 HMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLING 375
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 149/324 (45%), Gaps = 27/324 (8%)
Query: 138 VRSHAVKVGLDSNVFVVNALI-GMYGKWGLVE---YGRKVFEWAVDKDLYSWNTMIAAYV 193
V +K+G + + N LI G++ + + E ++ E D+ ++N+++
Sbjct: 145 VLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGIC 204
Query: 194 GSGNMSQAKELFDEMQEQ----DVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEY 249
SG+ S A +L +M+E+ DV ++STII + GC A+ F M G K +
Sbjct: 205 RSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVV 264
Query: 250 TFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEH 309
T+ S + + G + + EI N ++D++ K G+++ A+ ++ E
Sbjct: 265 TYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEM 324
Query: 310 NAKRKVWP----WNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYM 365
R + P +N ++ G+ M + SEA + M SP+ VTF +L+
Sbjct: 325 -ITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 383
Query: 366 VEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSM---PMAPDVAIWG 422
V++G FR +S G++ Y +V ++G +K AE++ M + PDV +G
Sbjct: 384 VDDGMKVFR-NISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYG 442
Query: 423 AVLN----------ACRIYKDMER 436
+L+ A I++D+++
Sbjct: 443 ILLDGLCDNGKLEKALEIFEDLQK 466
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/393 (20%), Positives = 168/393 (42%), Gaps = 29/393 (7%)
Query: 55 FLKLVADASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSP 114
FL+ ++ ++ + QPD+ YN+++ S D+ + LL +
Sbjct: 169 FLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRS----GDTSLALDLLRKME--ER 222
Query: 115 NRYSFVFTFGA-----CGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEY 169
N + VFT+ C +G + + G+ S+V N+L+ K G
Sbjct: 223 NVKADVFTYSTIIDSLCRDG-CIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWND 281
Query: 170 GRKVFEWAVDKDLY----SWNTMIAAYVGSGNMSQAKELFDEMQEQ----DVVSWSTIIA 221
G + + V +++ ++N ++ +V G + +A EL+ EM + ++++++T++
Sbjct: 282 GALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMD 341
Query: 222 GYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKM 281
GY EA + M++ P+ TF S + + +D G + I + +
Sbjct: 342 GYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVA 401
Query: 282 NERLLASIIDMYAKCGEIESASRVFWE---HNAKRKVWPWNAMIGGFAMHGKPSEAIKVF 338
N + ++ + + G+I+ A +F E H V + ++ G +GK +A+++F
Sbjct: 402 NAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 461
Query: 339 QKMKVENVSPNKVTFVALLNACSHGYMVEEG-KLYFRLMVSDYGIIPEIEHYGCMVDLLS 397
+ ++ + V + ++ G VE+ L+ L G+ P + Y M+ L
Sbjct: 462 EDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCK--GVKPNVMTYTVMISGLC 519
Query: 398 RAGLLKEAEDMISSMPM---APDVAIWGAVLNA 427
+ G L EA ++ M AP+ + ++ A
Sbjct: 520 KKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 143/315 (45%), Gaps = 17/315 (5%)
Query: 111 GLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYG 170
G P+ +F G ++E + + V++G+ +V + +I K G V Y
Sbjct: 137 GFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYA 196
Query: 171 RKVFE----WAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQ----DVVSWSTIIAG 222
+F+ + + D+ + +++ SG A L M ++ DV++++ +I
Sbjct: 197 LSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDA 256
Query: 223 YVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMN 282
+V+ G F++A + ++ M+++ PN +T+ S + +D+ + + + +
Sbjct: 257 FVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPD 316
Query: 283 ERLLASIIDMYAKCGEIESASRVFWEHNAKR---KVWPWNAMIGGFAMHGKPSEAIKVFQ 339
S+I+ + KC +++ A ++F+E + K + +I GF GKP+ A +VF
Sbjct: 317 VVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFS 376
Query: 340 KMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDY--GIIPEIEHYGCMVDLLS 397
M V PN T+ LL+ + V++ + F M G+ P I Y ++ L
Sbjct: 377 HMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLC 436
Query: 398 RAGLLKEA----EDM 408
G L++A EDM
Sbjct: 437 YNGKLEKALMVFEDM 451
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 157/346 (45%), Gaps = 32/346 (9%)
Query: 58 LVADASLSYAHKLFDQIP----QPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLS 113
L + ++YA LFDQ+ +PD+ +Y +++ S D+ + R +T+ +
Sbjct: 187 LCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNS-GRWRDADSLLRGMTKRK-IK 244
Query: 114 PNRYSFVFTFGACGNGLSVQEG-----EQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVE 168
P+ V TF A + V+EG E++ + +++ + N+F +LI + G V+
Sbjct: 245 PD----VITFNALIDAF-VKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVD 299
Query: 169 YGRKVFEWAVDK----DLYSWNTMIAAYVGSGNMSQAKELFDEMQEQ----DVVSWSTII 220
R++F K D+ ++ ++I + + A ++F EM ++ + ++++T+I
Sbjct: 300 EARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLI 359
Query: 221 AGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIK 280
G+ QVG A + F M+ G PN T+ L + + I + + E+
Sbjct: 360 QGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMD 419
Query: 281 -MNERLLASIIDMYAKC--GEIESASRVFWEHNAKRKV----WPWNAMIGGFAMHGKPSE 333
+ + + ++ C G++E A VF E KR++ + +I G GK
Sbjct: 420 GVAPNIWTYNVLLHGLCYNGKLEKALMVF-EDMRKREMDIGIITYTIIIQGMCKAGKVKN 478
Query: 334 AIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSD 379
A+ +F + + V PN VT+ +++ + E + FR M D
Sbjct: 479 AVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKED 524
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 114/247 (46%), Gaps = 16/247 (6%)
Query: 177 AVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQ----EQDVVSWSTIIAGYVQVGCFMEA 232
V DLY+ N ++ + S A +M E D+V+++++I G+ EA
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161
Query: 233 LDFFHRMLQVGPKPNEYTFVSAL-AACSN------LVALDQGKWIHSFIGRGEIKMNERL 285
+ ++M+++G KP+ + + + + C N L DQ + ++ R ++ M L
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQ---MENYGIRPDVVMYTSL 218
Query: 286 LASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVEN 345
+ + + + + +S R + K V +NA+I F GK +A +++ +M +
Sbjct: 219 VNGLCN-SGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMS 277
Query: 346 VSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEA 405
++PN T+ +L+N V+E + F LM + G P++ Y +++ + + +A
Sbjct: 278 IAPNIFTYTSLINGFCMEGCVDEARQMFYLMETK-GCFPDVVAYTSLINGFCKCKKVDDA 336
Query: 406 EDMISSM 412
+ M
Sbjct: 337 MKIFYEM 343
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 131/286 (45%), Gaps = 12/286 (4%)
Query: 138 VRSHAVKVGLDSNVFVVNALIGMYGKWGLVE----YGRKVFEWAVDKDLYSWNTMIAAYV 193
V S K V NALI +GK G+VE RK+ E ++ LY++N ++ V
Sbjct: 174 VSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLV 233
Query: 194 GSGNMSQAKELFDEMQ----EQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEY 249
+ + A+ +F+ M+ + D+V+++T+I GY + G +A++ M G + ++
Sbjct: 234 SAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKI 293
Query: 250 TFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVF--- 306
T+++ + AC ++ + I++ + +I K G++ VF
Sbjct: 294 TYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENM 353
Query: 307 WEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMV 366
+K V + +I G+A G +AI++ +M E P+ VT+ ++N V
Sbjct: 354 IRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRV 413
Query: 367 EEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSM 412
EE YF D G+ Y ++D L +AG + EAE + M
Sbjct: 414 EEALDYFHTCRFD-GLAINSMFYSSLIDGLGKAGRVDEAERLFEEM 458
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 164/404 (40%), Gaps = 76/404 (18%)
Query: 108 RDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWG-- 165
+++G+ P Y++ F + + V E+V + ++ N +I Y K G
Sbjct: 214 KENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQT 273
Query: 166 --LVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQ------------ 211
+E R + + D ++ TMI A + L+ EM E+
Sbjct: 274 QKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLV 333
Query: 212 ---------------------------DVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGP 244
+V ++ +I GY + G +A+ HRM+ G
Sbjct: 334 IGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGF 393
Query: 245 KPNEYTF-VSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESAS 303
KP+ T+ V C N + + H+ G + +N +S+ID K G ++ A
Sbjct: 394 KPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDG-LAINSMFYSSLIDGLGKAGRVDEAE 452
Query: 304 RVFWEHNAK---RKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKV-TFVALLNA 359
R+F E + K R + +NA+I F H K EAI +F++M+ E V T+ LL+
Sbjct: 453 RLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSG 512
Query: 360 CSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCM----------------VDLLSRAGLLK 403
+ EE + +M+ D GI P + + +D L+ G++
Sbjct: 513 MFKEHRNEEALKLWDMMI-DKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVIL 571
Query: 404 EA--EDMISSMPMAPDVAIWGAVLNACRIYKDM-ERGYRI-GRI 443
+A EDMI+++ A G + AC++ + ERG + GRI
Sbjct: 572 DAACEDMINTLCKA------GRIKEACKLADGITERGREVPGRI 609
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 99/439 (22%), Positives = 188/439 (42%), Gaps = 38/439 (8%)
Query: 64 LSYAHKLFDQIPQ----PDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSF 119
+S A L DQ+ + PD F + T+I L + +V +++ R G P+
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR--GCQPD---- 222
Query: 120 VFTFGACGNGL----SVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFE 175
+ T+G NGL + + + + +NV + N +I K+ VE +F
Sbjct: 223 LVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFT 282
Query: 176 W----AVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQ----DVVSWSTIIAGYVQVG 227
+ ++ ++N++I G S A L M E+ +VV+++ +I + + G
Sbjct: 283 EMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEG 342
Query: 228 CFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLA 287
+EA M+Q P+ T+ + LD+ K + F+ + N +
Sbjct: 343 KLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYN 402
Query: 288 SIIDMYAKCGEIESASRVFWEHNAKRKVW---PWNAMIGGFAMHGKPSEAIKVFQKMKVE 344
++I+ + KC +E +F E + + V + +I GF G A VF++M
Sbjct: 403 TLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSN 462
Query: 345 NVSPNKVTFVALLNA-CSHGYMVEEGKLYFRLMVSDYGIIPEIEH----YGCMVDLLSRA 399
V + +T+ LL+ CS+G KL L++ Y E+E Y M++ + +A
Sbjct: 463 RVPTDIMTYSILLHGLCSYG------KLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKA 516
Query: 400 GLLKEAEDMISSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKE--MDPNHVGCHVL 457
G + EA D+ S+ + PDV + +++ + ++ + R +KE PN + L
Sbjct: 517 GKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTL 576
Query: 458 LGNIYSSSGRWNDARMLRE 476
+ R A +++E
Sbjct: 577 IRANLRDCDRAASAELIKE 595
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 130/290 (44%), Gaps = 20/290 (6%)
Query: 138 VRSHAVKVGLDSNVFVVNALIGMY-------GKWGLVEYGRKVFEWAVDKDLYSWNTMIA 190
V + +K+G + ++ +++L+ Y LV+ ++ E D +++ T+I
Sbjct: 140 VLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVD---QMVEMGYKPDTFTFTTLIH 196
Query: 191 AYVGSGNMSQAKELFDEMQEQ----DVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKP 246
S+A L D+M ++ D+V++ T++ G + G AL+ ++M K
Sbjct: 197 GLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKA 256
Query: 247 NEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVF 306
N F + + + ++ + + + I+ N S+I+ G ASR+
Sbjct: 257 NVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLL 316
Query: 307 ---WEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNA-CSH 362
E V +NA+I F GK EA K+ ++M ++ P+ +T+ L+N C H
Sbjct: 317 SNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMH 376
Query: 363 GYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSM 412
+ +E K F+ MVS +P I+ Y +++ + +++ ++ M
Sbjct: 377 NRL-DEAKQMFKFMVSK-DCLPNIQTYNTLINGFCKCKRVEDGVELFREM 424
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 154/334 (46%), Gaps = 24/334 (7%)
Query: 98 DSLMVFRLLTRDSGLSPNRYSF-VFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNA 156
D+L + ++ G P++Y+F G C G V+ ++ ++ G D +V+ N+
Sbjct: 277 DALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAG-HVKHAIEIMDVMLQEGYDPDVYTYNS 335
Query: 157 LIGMYGKWGLVEYGRKVFEWAVDKD----LYSWNTMIAAYVGSGNMSQAKELFDEMQEQ- 211
+I K G V+ +V + + +D ++NT+I+ + +A EL + +
Sbjct: 336 VISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 395
Query: 212 ---DVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTF---VSALAACSNL-VAL 264
DV +++++I G A++ F M G +P+E+T+ + +L + L AL
Sbjct: 396 ILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEAL 455
Query: 265 DQGKWIH-SFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWE---HNAKRKVWPWNA 320
+ K + S R I N ++ID + K + A +F E H R +N
Sbjct: 456 NMLKQMELSGCARSVITYN-----TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNT 510
Query: 321 MIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDY 380
+I G + +A ++ +M +E P+K T+ +LL G +++ + M S+
Sbjct: 511 LIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSN- 569
Query: 381 GIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPM 414
G P+I YG ++ L +AG ++ A ++ S+ M
Sbjct: 570 GCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQM 603
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 177/393 (45%), Gaps = 38/393 (9%)
Query: 64 LSYAHKLFDQI----PQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSF 119
+S A L DQ+ QP+ +NT+I L + ++ R++ R G P+
Sbjct: 166 ISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAR--GCQPD---- 219
Query: 120 VFTFGACGNGL----SVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFE 175
+FT+G NGL + + K ++++V + +I + V +F
Sbjct: 220 LFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFT 279
Query: 176 WAVDK----DLYSWNTMIAAYVGSGNMSQAKELFDEMQEQ----DVVSWSTIIAGYVQVG 227
+K ++ ++N++I G S A L +M E+ +VV++S +I +V+ G
Sbjct: 280 EMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG 339
Query: 228 CFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLA 287
+EA + M++ P+ +T+ S + LD+ K + + + N
Sbjct: 340 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 399
Query: 288 SIIDMYAKCGEIESASRVFWEHNAKRKVW---PWNAMIGGFAMHGKPSEAIKVFQKMKVE 344
++I + K +E +F E + + V +N +I G G A K+F+KM +
Sbjct: 400 TLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD 459
Query: 345 NVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDY----GIIPEIEHYGCMVDLLSRAG 400
V P+ +T+ LL+ + + GKL L+V +Y + P+I Y M++ + +AG
Sbjct: 460 GVPPDIITYSILLDG-----LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 514
Query: 401 LLKEAEDMISSMPM---APDVAIWGAVLNA-CR 429
+++ D+ S+ + P+V I+ +++ CR
Sbjct: 515 KVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCR 547
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 134/284 (47%), Gaps = 17/284 (5%)
Query: 181 DLYSWNTMIAAYVGSGNMSQAKELFDEMQ----EQDVVSWSTIIAGYVQVGCFMEALDFF 236
DL+++ T++ G++ A L +M+ E DVV ++TII +AL+ F
Sbjct: 219 DLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLF 278
Query: 237 HRMLQVGPKPNEYTFVSALAACSNLVA-LDQGKWIHSFIGRGEIKMNERLLASIIDMYAK 295
M G +PN T+ S + N D + + I R +I N +++ID + K
Sbjct: 279 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER-KINPNVVTFSALIDAFVK 337
Query: 296 CGEIESASRVFWEHNAKRKVWP----WNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKV 351
G++ A +++ E KR + P ++++I GF MH + EA +F+ M ++ PN V
Sbjct: 338 EGKLVEAEKLYDEM-IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 396
Query: 352 TFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISS 411
T+ L+ VEEG FR M S G++ Y ++ L +AG A+ +
Sbjct: 397 TYNTLIKGFCKAKRVEEGMELFREM-SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 455
Query: 412 M---PMAPDVAIWGAVLNACRIYKDMERGYRIGRIIK--EMDPN 450
M + PD+ + +L+ Y +E+ + ++ +M+P+
Sbjct: 456 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPD 499
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 135/295 (45%), Gaps = 13/295 (4%)
Query: 76 QPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEG 135
+P++ YN++I+ + S ++ ++ R ++PN +F A + E
Sbjct: 287 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK--INPNVVTFSALIDAFVKEGKLVEA 344
Query: 136 EQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLY----SWNTMIAA 191
E++ +K +D ++F ++LI + ++ + +FE + KD + ++NT+I
Sbjct: 345 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 404
Query: 192 YVGSGNMSQAKELFDEMQEQ----DVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPN 247
+ + + + ELF EM ++ + V+++T+I G Q G A F +M+ G P+
Sbjct: 405 FCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD 464
Query: 248 EYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFW 307
T+ L L++ + ++ + +++ + +I+ K G++E +F
Sbjct: 465 IITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 524
Query: 308 E---HNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNA 359
K V + MI GF G EA +F++MK + PN T+ L+ A
Sbjct: 525 SLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 579
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/379 (19%), Positives = 161/379 (42%), Gaps = 48/379 (12%)
Query: 61 DASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFV 120
D +LS K+ + D+ IY T+I A + + ND+L +F + + G+ PN ++
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYTTIIDALC-NYKNVNDALNLFTEMD-NKGIRPNVVTYN 294
Query: 121 FTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFE----W 176
N + ++ S ++ ++ NV +ALI + K G + K+++
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 177 AVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQD----VVSWSTIIAGYVQVGCFMEA 232
++D D+++++++I + + +AK +F+ M +D VV+++T+I G+ + E
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414
Query: 233 LDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDM 292
++ F M Q G N T+ I G+ M +++ ++
Sbjct: 415 MELFREMSQRGLVGNTVTY---------------NTLIQGLFQAGDCDMAQKIFKKMV-- 457
Query: 293 YAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVT 352
+ ++ ++ G +GK +A+ VF+ ++ + P+ T
Sbjct: 458 ---------------SDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYT 502
Query: 353 FVALLNACSHGYMVEEG-KLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISS 411
+ ++ VE+G L+ L + G+ P + Y M+ R GL +EA+ +
Sbjct: 503 YNIMIEGMCKAGKVEDGWDLFCSLSLK--GVKPNVIIYTTMISGFCRKGLKEEADALFRE 560
Query: 412 MP---MAPDVAIWGAVLNA 427
M P+ + ++ A
Sbjct: 561 MKEDGTLPNSGTYNTLIRA 579
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 146/355 (41%), Gaps = 51/355 (14%)
Query: 135 GEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLV-EYGRKVFEWAVDKDLYSWNTMIAAYV 193
GE V+S + ++ N + + I K+ LV G ++ + DLYS+N +I +
Sbjct: 69 GEMVQSRPLPSIVEFNKLL--SAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFC 126
Query: 194 GSGNMSQAKELFDEMQ----EQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEY 249
+ A + +M E D+V+ S+++ GY EA+ +M + +PN
Sbjct: 127 RRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTV 186
Query: 250 TFVS-------------ALAACSNLVA-------LDQGKWIHSFIGRGEIKMNERLL--- 286
TF + A+A +VA G ++ RG+I + LL
Sbjct: 187 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 246
Query: 287 ------------ASIIDMYAKCGEIESASRVFWEHNAK---RKVWPWNAMIGGFAMHGKP 331
+IID + A +F E + K V +N++I +G+
Sbjct: 247 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 306
Query: 332 SEAIKVFQKMKVENVSPNKVTFVALLNA-CSHGYMVEEGKLYFRLMVSDYGIIPEIEHYG 390
S+A ++ M ++PN VTF AL++A G +VE KLY ++ I P+I Y
Sbjct: 307 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI--KRSIDPDIFTYS 364
Query: 391 CMVDLLSRAGLLKEAEDMISSMPMA---PDVAIWGAVLNACRIYKDMERGYRIGR 442
+++ L EA+ M M P+V + ++ K +E G + R
Sbjct: 365 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 119/268 (44%), Gaps = 31/268 (11%)
Query: 231 EALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERL---LA 287
+A+D F M+Q P P+ F L+A + + D I GE N R+ L
Sbjct: 63 DAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDL------VISLGERMQNLRISYDLY 116
Query: 288 S---IIDMYAKCGEIESASRVF---WEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKM 341
S +I+ + + ++ A V + + + ++++ G+ + SEA+ + +M
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 176
Query: 342 KVENVSPNKVTFVALLNAC-SHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAG 400
V PN VTF L++ H E L R++ G P++ YG +V+ L + G
Sbjct: 177 FVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAR--GCQPDLFTYGTVVNGLCKRG 234
Query: 401 LLKEAEDMISSM---PMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMD-----PNHV 452
+ A ++ M + DV I+ +++A YK++ + EMD PN V
Sbjct: 235 DIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDAL---NLFTEMDNKGIRPNVV 291
Query: 453 GCHVLLGNIYSSSGRWNDA-RMLREKSE 479
+ L+ + GRW+DA R+L + E
Sbjct: 292 TYNSLI-RCLCNYGRWSDASRLLSDMIE 318
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 87/395 (22%), Positives = 178/395 (45%), Gaps = 37/395 (9%)
Query: 97 NDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGL----SVQEGEQVRSHAVKVGLDSNVF 152
++++++ +++D G+ P+ + T+ A NG + +++ +VGL N
Sbjct: 460 DEAVVLLNEMSKD-GIDPD----IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGI 514
Query: 153 VVNALIGMYGKWGLVEYGRKVFEWAV----DKDLYSWNTMIAAYVGSGNMSQAKELFDEM 208
+ + LI + G ++ +++E + +D +++N ++ + +G +++A+E M
Sbjct: 515 IYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCM 574
Query: 209 QEQDV----VSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVAL 264
+ VS+ +I GY G ++A F M +VG P +T+ S L L
Sbjct: 575 TSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHL 634
Query: 265 DQG----KWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWP--- 317
+ K +H+ + M LL ++ K G + A +F E +R + P
Sbjct: 635 REAEKFLKSLHAVPAAVDTVMYNTLLTAM----CKSGNLAKAVSLFGEM-VQRSILPDSY 689
Query: 318 -WNAMIGGFAMHGKPSEAIKVFQKMKVE-NVSPNKVTFVALLNACSHGYMVEEGKLYFRL 375
+ ++I G GK AI ++ + NV PNKV + ++ + G +YFR
Sbjct: 690 TYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAG-IYFRE 748
Query: 376 MVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPM---APDVAIWGAVLNACRIYK 432
+ + G P+I M+D SR G +++ D++ M P++ + +L+ K
Sbjct: 749 QMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRK 808
Query: 433 DMERGYRIGR--IIKEMDPNHVGCHVLLGNIYSSS 465
D+ + + R I+ + P+ + CH L+ I S+
Sbjct: 809 DVSTSFLLYRSIILNGILPDKLTCHSLVLGICESN 843
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/409 (21%), Positives = 175/409 (42%), Gaps = 30/409 (7%)
Query: 65 SYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPN--RYSFVFT 122
S+ ++ + PD+ +N +I S S ++ ++ SG +P Y+ V
Sbjct: 219 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKM--EKSGYAPTIVTYNTVLH 276
Query: 123 FGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYG----RKVFEWAV 178
+ C G + ++ H G+D++V N LI + + G R + + +
Sbjct: 277 W-YCKKG-RFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMI 334
Query: 179 DKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDV----VSWSTIIAGYVQVGCFMEALD 234
+ ++NT+I + G + A +L +EM + V+++ +I G++ G F EAL
Sbjct: 335 HPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALK 394
Query: 235 FFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYA 294
F+ M G P+E ++ L D + + + R + + +ID
Sbjct: 395 MFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLC 454
Query: 295 KCGEIESASRVFWEHNAKRKVWP----WNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNK 350
K G ++ A V +K + P ++A+I GF G+ A ++ ++ +SPN
Sbjct: 455 KNGFLDEAV-VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNG 513
Query: 351 VTFVALL-NACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMI 409
+ + L+ N C G + E ++Y +++ G + + +V L +AG + EAE+ +
Sbjct: 514 IIYSTLIYNCCRMGCLKEAIRIYEAMILE--GHTRDHFTFNVLVTSLCKAGKVAEAEEFM 571
Query: 410 SSMP---MAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVGCH 455
M + P+ + ++N Y + G + + EM VG H
Sbjct: 572 RCMTSDGILPNTVSFDCLING---YGNSGEGLKAFSVFDEM--TKVGHH 615
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 149/362 (41%), Gaps = 79/362 (21%)
Query: 76 QPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSF-VFTFGACGNGLSVQE 134
P+ +N +I H +S + ++L +F ++ GL+P+ S+ V G C N E
Sbjct: 370 SPNHVTFNALIDGH-ISEGNFKEALKMFYMM-EAKGLTPSEVSYGVLLDGLCKNA----E 423
Query: 135 GEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVG 194
+ R +++ K V GR ++ MI
Sbjct: 424 FDLARGFYMRM-----------------KRNGVCVGR-----------ITYTGMIDGLCK 455
Query: 195 SGNMSQAKELFDEMQEQ----DVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYT 250
+G + +A L +EM + D+V++S +I G+ +VG F A + R+ +VG PN
Sbjct: 456 NGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGII 515
Query: 251 FVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHN 310
+ + + C + L + I++ E ++ +E +R +H
Sbjct: 516 YSTLIYNCCRMGCLKEA-----------IRIYEAMI------------LEGHTR---DH- 548
Query: 311 AKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGK 370
+ +N ++ GK +EA + + M + + PN V+F L+N + EG
Sbjct: 549 -----FTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNS---GEGL 600
Query: 371 LYFRLM--VSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSM---PMAPDVAIWGAVL 425
F + ++ G P YG ++ L + G L+EAE + S+ P A D ++ +L
Sbjct: 601 KAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLL 660
Query: 426 NA 427
A
Sbjct: 661 TA 662
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 138/330 (41%), Gaps = 31/330 (9%)
Query: 76 QPDLFIYNTMIKAHSLSPSSC-NDSLMVFRLLTRDSGLSPNRYSF-VFTFGACGNGLSVQ 133
P+ IY+T+I ++ C +++ ++ + + G + + ++F V C G V
Sbjct: 510 SPNGIIYSTLI--YNCCRMGCLKEAIRIYEAMILE-GHTRDHFTFNVLVTSLCKAG-KVA 565
Query: 134 EGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVD----KDLYSWNTMI 189
E E+ G+ N + LI YG G VF+ +++ +++
Sbjct: 566 EAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLL 625
Query: 190 AAYVGSGNMSQAKELFDEMQEQ----DVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPK 245
G++ +A++ + D V ++T++ + G +A+ F M+Q
Sbjct: 626 KGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSIL 685
Query: 246 PNEYTFVSALAACSNLVALDQGKWIHSFI------GRGEIKMNERLLASIIDMYAKCGEI 299
P+ YT+ S ++ +GK + + + RG + N+ + +D K G+
Sbjct: 686 PDSYTYTSLISGLCR-----KGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQW 740
Query: 300 ESASRVFWEHNAKRKVWP----WNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVA 355
+ A F E P NAMI G++ GK + + +M +N PN T+
Sbjct: 741 K-AGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNI 799
Query: 356 LLNACSHGYMVEEGKLYFRLMVSDYGIIPE 385
LL+ S V L +R ++ + GI+P+
Sbjct: 800 LLHGYSKRKDVSTSFLLYRSIILN-GILPD 828
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 187/440 (42%), Gaps = 69/440 (15%)
Query: 64 LSYAHKLFDQI----PQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSF 119
L HKLF Q + D+ ++++ I + S S++ R+L + G+SPN ++
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ--GISPNVVTY 394
Query: 120 -VFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAV 178
+ G C +G + E + +K G++ ++ ++LI + K G + G ++E +
Sbjct: 395 TILIKGLCQDG-RIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI 453
Query: 179 D----KDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQ----DVVSWSTIIAGYVQVGCFM 230
D+ + ++ G M A +M Q +VV ++++I G+ ++ F
Sbjct: 454 KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFD 513
Query: 231 EALDFFHRMLQVGPKPNEYTFVSAL-------AACSNLVALDQGKWIHSFIGRGEIKMNE 283
EAL F M G KP+ TF + + A C ++ G + + R +I +
Sbjct: 514 EALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKP-TIGLQLFDLMQRNKISADI 572
Query: 284 RLLASIIDMYAKCGEIESASRVF---WEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQK 340
+ +I + KC IE AS+ F E + + +N MI G+ + EA ++F+
Sbjct: 573 AVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFEL 632
Query: 341 MKVENVSPNKVTFVALL--------------------------NACSHGYMVE------- 367
+KV PN VT L+ NA ++G +++
Sbjct: 633 LKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVD 692
Query: 368 -EGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLN 426
EG + + GI P I Y ++D L + G + EA ++ AI +L
Sbjct: 693 IEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ-------AIDAKLLP 745
Query: 427 ACRIYKDMERGY-RIGRIIK 445
Y + RGY ++GR+++
Sbjct: 746 DVVAYAILIRGYCKVGRLVE 765
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 96/432 (22%), Positives = 188/432 (43%), Gaps = 42/432 (9%)
Query: 106 LTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAV-----KVGLDSNVFVVNALIGM 160
L D G +PN V TF NG + GE R+ + + G++ ++ + LI
Sbjct: 276 LVLDCGPAPN----VVTFCTLINGFC-KRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDG 330
Query: 161 YGKWGLVEYGRKVFEWAVDK----DLYSWNTMIAAYVGSGNMSQAKELFDEMQEQ----D 212
Y K G++ G K+F A+ K D+ +++ I YV SG+++ A ++ M Q +
Sbjct: 331 YFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPN 390
Query: 213 VVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHS 272
VV+++ +I G Q G EA + ++L+ G +P+ T+ S + L G ++
Sbjct: 391 VVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYE 450
Query: 273 FIGRGEIKMNERLLASIIDMYAKCGEIESASRV---FWEHNAKRKVWPWNAMIGGFAMHG 329
+ + + + ++D +K G + A R + + V +N++I G+
Sbjct: 451 DMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLN 510
Query: 330 KPSEAIKVFQKMKVENVSPNKVTFVALLNA-------CSHGYMVEEGKLYFRLMVSDYGI 382
+ EA+KVF+ M + + P+ TF ++ C H G F LM + I
Sbjct: 511 RFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKH-MKPTIGLQLFDLMQRN-KI 568
Query: 383 IPEIEHYGCMVDLLSRAGLLKEAEDMISSM---PMAPDVAIWGAVLNACRIYKDMERGYR 439
+I ++ LL + +++A +++ M PD+ + ++ + ++ R
Sbjct: 569 SADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAER 628
Query: 440 IGRIIK--EMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTATKKIP-GC------ 490
I ++K PN V +L+ + ++ RM +E + + GC
Sbjct: 629 IFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFS 688
Query: 491 SSIELNGTFYQF 502
S+++ G+F F
Sbjct: 689 KSVDIEGSFKLF 700
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 120/268 (44%), Gaps = 11/268 (4%)
Query: 146 GLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELF 205
G+ ++ FV++AL +++ R V E + S N ++ + + A L
Sbjct: 216 GVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKG-LSVDQIEVASRLL 274
Query: 206 ----DEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNL 261
D +VV++ T+I G+ + G A D F M Q G +P+ + + +
Sbjct: 275 SLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKA 334
Query: 262 VALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWE---HNAKRKVWPW 318
L G + S +K++ + +S ID+Y K G++ +AS V+ V +
Sbjct: 335 GMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTY 394
Query: 319 NAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNA-CSHGYMVEEGKLYFRLMV 377
+I G G+ EA ++ ++ + P+ VT+ +L++ C G + LY ++
Sbjct: 395 TILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI- 453
Query: 378 SDYGIIPEIEHYGCMVDLLSRAGLLKEA 405
G P++ YG +VD LS+ GL+ A
Sbjct: 454 -KMGYPPDVVIYGVLVDGLSKQGLMLHA 480
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 98/231 (42%), Gaps = 20/231 (8%)
Query: 178 VDKDLYSWNTMIAAYVGSGNMSQAKELFDEM----QEQDVVSWSTIIAGYVQVGCFMEAL 233
+ D+ N +I + A + F+ + E D+V+++T+I GY + EA
Sbjct: 568 ISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAE 627
Query: 234 DFFHRMLQVGP-KPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDM 292
F +L+V P PN T + +D + S + K N ++D
Sbjct: 628 RIFE-LLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDW 686
Query: 293 YAKCGEIESASRVFWEHNAK---RKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPN 349
++K +IE + ++F E K + ++ +I G G+ EA +F + + P+
Sbjct: 687 FSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPD 746
Query: 350 KVTFVALLNA-CSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRA 399
V + L+ C G +VE LY ++ + G+ P+ DLL RA
Sbjct: 747 VVAYAILIRGYCKVGRLVEAALLYEHMLRN--GVKPD--------DLLQRA 787
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 118/259 (45%), Gaps = 11/259 (4%)
Query: 112 LSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGR 171
++PN +F A E E++ +K +D ++F N+LI + ++ +
Sbjct: 251 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAK 310
Query: 172 KVFEWAVDKDLY----SWNTMIAAYVGSGNMSQAKELFDEMQEQ----DVVSWSTIIAGY 223
++FE+ V KD + ++NT+I + S + ELF EM + D V+++T+I G
Sbjct: 311 QMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 370
Query: 224 VQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNE 283
G A F +M+ G P+ T+ L N L++ + ++ + EIK++
Sbjct: 371 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 430
Query: 284 RLLASIIDMYAKCGEIESASRVFWE---HNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQK 340
+ ++I+ K G+++ +F K V +N MI G EA + +K
Sbjct: 431 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 490
Query: 341 MKVENVSPNKVTFVALLNA 359
MK + P+ T+ L+ A
Sbjct: 491 MKEDGPLPDSGTYNTLIRA 509
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/352 (19%), Positives = 156/352 (44%), Gaps = 31/352 (8%)
Query: 150 NVFVVNALIGMYGKWG----LVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELF 205
++F N L+ K ++ G K+ + +LY++N +I + +S A L
Sbjct: 9 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 68
Query: 206 DEMQ----EQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAA---- 257
+M E +V+ S+++ GY +A+ +M+++G +P+ TF + +
Sbjct: 69 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 128
Query: 258 --CSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKR-- 313
S VAL + + RG + N +++ K G+I+ A + + A +
Sbjct: 129 NKASEAVAL-----VDRMVQRG-CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE 182
Query: 314 -KVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNA-CSHGYMVEEGKL 371
V +N +I + +A+ +F++M+ + + PN VT+ +L++ CS+G + +L
Sbjct: 183 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 242
Query: 372 YFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSM---PMAPDVAIWGAVLNAC 428
++ + I P + + ++D + G EAE + M + PD+ + +++N
Sbjct: 243 LSDMI--EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 429 RIYKDMERGYRIGRIIKEMD--PNHVGCHVLLGNIYSSSGRWNDARMLREKS 478
++ +++ ++ + D P+ + L+ S + + RE S
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMS 352
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 125/270 (46%), Gaps = 19/270 (7%)
Query: 172 KVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQ----EQDVVSWSTIIAGYVQVG 227
++ + +L ++ ++ G++ A L ++M+ E DVV ++TII +
Sbjct: 140 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYR 199
Query: 228 CFMEALDFFHRMLQVGPKPNEYTFVSALAA-CSNLVALDQGKWIHSFIGRGEIKMNERLL 286
+AL+ F M G +PN T+ S ++ CS D + + I E K+N L+
Sbjct: 200 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI---EKKINPNLV 256
Query: 287 A--SIIDMYAKCGEIESASRVFWEHNAKRKVWP----WNAMIGGFAMHGKPSEAIKVFQK 340
++ID + K G+ A ++ + KR + P +N++I GF MH + +A ++F+
Sbjct: 257 TFNALIDAFVKEGKFVEAEKL-HDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEF 315
Query: 341 MKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAG 400
M ++ P+ T+ L+ VE+G FR M S G++ + Y ++ L G
Sbjct: 316 MVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM-SHRGLVGDTVTYTTLIQGLFHDG 374
Query: 401 LLKEAEDMISSM---PMAPDVAIWGAVLNA 427
A+ + M + PD+ + +L+
Sbjct: 375 DCDNAQKVFKQMVSDGVPPDIMTYSILLDG 404
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 118/259 (45%), Gaps = 11/259 (4%)
Query: 112 LSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGR 171
++PN +F A E E++ +K +D ++F N+L+ + ++ +
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAK 385
Query: 172 KVFEWAVDKDLY----SWNTMIAAYVGSGNMSQAKELFDEMQEQ----DVVSWSTIIAGY 223
++FE+ V KD + ++NT+I + S + ELF EM + D V+++T+I G
Sbjct: 386 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 445
Query: 224 VQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNE 283
G A F +M+ G P+ T+ L N L++ + ++ + EIK++
Sbjct: 446 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 505
Query: 284 RLLASIIDMYAKCGEIESASRVFWE---HNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQK 340
+ ++I+ K G+++ +F K V +N MI G EA + +K
Sbjct: 506 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 565
Query: 341 MKVENVSPNKVTFVALLNA 359
MK + PN T+ L+ A
Sbjct: 566 MKEDGPLPNSGTYNTLIRA 584
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/397 (19%), Positives = 173/397 (43%), Gaps = 18/397 (4%)
Query: 45 LISHHVSANKFLKL-VADASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVF 103
L+++ V N K D +L+ +K+ + D+ I+NT+I + +D+L +F
Sbjct: 225 LVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLC-KYRHVDDALNLF 283
Query: 104 RLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGK 163
+ + G+ PN ++ + + Q+ S ++ ++ N+ NALI + K
Sbjct: 284 KEM-ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK 342
Query: 164 WGLVEYGRKVFE----WAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQD----VVS 215
G K+++ ++D D++++N+++ + + +AK++F+ M +D VV+
Sbjct: 343 EGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVT 402
Query: 216 WSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIG 275
++T+I G+ + + + F M G + T+ + + + D + + +
Sbjct: 403 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 462
Query: 276 RGEIKMNERLLASIIDMYAKCGEIESASRVF---WEHNAKRKVWPWNAMIGGFAMHGKPS 332
+ + + ++D G++E A VF + K ++ + MI G GK
Sbjct: 463 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 522
Query: 333 EAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCM 392
+ +F + ++ V PN VT+ +++ +++E + M D G +P Y +
Sbjct: 523 DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKED-GPLPNSGTYNTL 581
Query: 393 VDLLSRAGLLKEAEDMISSM---PMAPDVAIWGAVLN 426
+ R G + ++I M D + G V N
Sbjct: 582 IRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 618
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 126/270 (46%), Gaps = 19/270 (7%)
Query: 172 KVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQ----EQDVVSWSTIIAGYVQVG 227
++ + +L ++ ++ G+ A L ++M+ E DVV ++TII +
Sbjct: 215 RMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYR 274
Query: 228 CFMEALDFFHRMLQVGPKPNEYTFVSALAA-CSNLVALDQGKWIHSFIGRGEIKMNERLL 286
+AL+ F M G +PN T+ S ++ CS D + + I E K+N L+
Sbjct: 275 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI---EKKINPNLV 331
Query: 287 A--SIIDMYAKCGEIESASRVFWEHNAKRKVWP----WNAMIGGFAMHGKPSEAIKVFQK 340
++ID + K G+ A ++ ++ KR + P +N+++ GF MH + +A ++F+
Sbjct: 332 TFNALIDAFVKEGKFVEAEKL-YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEF 390
Query: 341 MKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAG 400
M ++ P+ VT+ L+ VE+G FR M S G++ + Y ++ L G
Sbjct: 391 MVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM-SHRGLVGDTVTYTTLIQGLFHDG 449
Query: 401 LLKEAEDMISSM---PMAPDVAIWGAVLNA 427
A+ + M + PD+ + +L+
Sbjct: 450 DCDNAQKVFKQMVSDGVPPDIMTYSILLDG 479
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/332 (19%), Positives = 148/332 (44%), Gaps = 27/332 (8%)
Query: 166 LVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQ----EQDVVSWSTIIA 221
++ G K+ + LY++N +I + +S A L +M E +V+ S+++
Sbjct: 104 VISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 163
Query: 222 GYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAA------CSNLVALDQGKWIHSFIG 275
GY +A+ +M+++G +P+ TF + + S VAL + +
Sbjct: 164 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVAL-----VDRMVQ 218
Query: 276 RGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKR---KVWPWNAMIGGFAMHGKPS 332
RG + N +++ K G+ + A + + A + V +N +I +
Sbjct: 219 RG-CQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 277
Query: 333 EAIKVFQKMKVENVSPNKVTFVALLNA-CSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGC 391
+A+ +F++M+ + + PN VT+ +L++ CS+G + +L ++ + I P + +
Sbjct: 278 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI--EKKINPNLVTFNA 335
Query: 392 MVDLLSRAGLLKEAEDMISSM---PMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMD 448
++D + G EAE + M + PD+ + +++N ++ +++ ++ + D
Sbjct: 336 LIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD 395
Query: 449 --PNHVGCHVLLGNIYSSSGRWNDARMLREKS 478
P+ V + L+ S + + RE S
Sbjct: 396 CFPDVVTYNTLIKGFCKSKRVEDGTELFREMS 427
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 139/307 (45%), Gaps = 15/307 (4%)
Query: 133 QEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDK----DLYSWNTM 188
++G ++ + ++ ++N + K G E GR +FE + D S++ +
Sbjct: 499 EDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSIL 558
Query: 189 IAAYVGSGNMSQAKELFDEMQEQ----DVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGP 244
I + +G ++ ELF M+EQ D +++ +I G+ + G +A M G
Sbjct: 559 IHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGF 618
Query: 245 KPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASR 304
+P T+ S + + + LD+ + I++N + +S+ID + K G I+ A
Sbjct: 619 EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYL 678
Query: 305 VFWEHNAK---RKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACS 361
+ E K ++ WN+++ + +EA+ FQ MK +PN+VT+ L+N
Sbjct: 679 ILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLC 738
Query: 362 HGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAE---DMISSMPMAPDV 418
+ ++++ M G+ P Y M+ L++AG + EA D + PD
Sbjct: 739 KVRKFNKAFVFWQEM-QKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDS 797
Query: 419 AIWGAVL 425
A + A++
Sbjct: 798 ACYNAMI 804
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 154/379 (40%), Gaps = 21/379 (5%)
Query: 110 SGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWG---- 165
+G P+ + + C ++EG V K LIG +
Sbjct: 127 AGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDM 186
Query: 166 LVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQ----EQDVVSWSTIIA 221
++ +++ E + ++ + T+I + G + A L DEM+ + D+V ++ I
Sbjct: 187 MLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCID 246
Query: 222 GYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKM 281
+ +VG A FFH + G KP+E T+ S + LD+ + + +
Sbjct: 247 SFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVP 306
Query: 282 NERLLASIIDMYAKCGEIESASRVFWEHNAK---RKVWPWNAMIGGFAMHGKPSEAIKVF 338
++I Y G+ + A + AK V +N ++ GK EA+KVF
Sbjct: 307 CTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVF 366
Query: 339 QKMKVENVSPNKVTFVALLNA-CSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLS 397
++MK ++ +PN T+ L++ C G + + R + G+ P + MVD L
Sbjct: 367 EEMK-KDAAPNLSTYNILIDMLCRAGKL--DTAFELRDSMQKAGLFPNVRTVNIMVDRLC 423
Query: 398 RAGLLKEAEDMISSMPM---APDVAIWGAVLNACRIYKDMERGYRIGRIIKEMD--PNHV 452
++ L EA M M PD + ++++ ++ Y++ + + D N +
Sbjct: 424 KSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSI 483
Query: 453 GCHVLLGNIYSSSGRWNDA 471
L+ N + + GR D
Sbjct: 484 VYTSLIKNFF-NHGRKEDG 501
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 135/319 (42%), Gaps = 21/319 (6%)
Query: 76 QPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTR--DSGLSPNRYSFVFTFGACGNGLSVQ 133
+P Y T+I A S + N S M+ L + + G P + F V
Sbjct: 165 RPAFSAYTTLIGAFS----AVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVD 220
Query: 134 EGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEW----AVDKDLYSWNTMI 189
+ LD+++ + N I +GK G V+ K F + D ++ +MI
Sbjct: 221 SALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMI 280
Query: 190 AAYVGSGNMSQAKELFDEMQEQDVV----SWSTIIAGYVQVGCFMEALDFFHRMLQVGPK 245
+ + +A E+F+ +++ V +++T+I GY G F EA R G
Sbjct: 281 GVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSI 340
Query: 246 PNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRV 305
P+ + L + +D+ + + + + N +IDM + G++++A +
Sbjct: 341 PSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFEL 399
Query: 306 FWEHNAKRKVWP----WNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACS 361
+ K ++P N M+ K EA +F++M + +P+++TF +L++
Sbjct: 400 -RDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLG 458
Query: 362 HGYMVEEG-KLYFRLMVSD 379
V++ K+Y +++ SD
Sbjct: 459 KVGRVDDAYKVYEKMLDSD 477
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 97/508 (19%), Positives = 195/508 (38%), Gaps = 99/508 (19%)
Query: 45 LISHHVSANKFLKL-VADASLSYAHKLFDQIPQPDLFIYNTMI----KAHSLSPSSCNDS 99
++ ++V + F K+ D + + H++ +PD Y +MI KA+ L +++
Sbjct: 238 IVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRL-----DEA 292
Query: 100 LMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIG 159
+ +F L ++ + P Y++ G+ E + G +V N ++
Sbjct: 293 VEMFEHLEKNRRV-PCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILT 351
Query: 160 MYGKWGLVEYGRKVFEWAVDKD----LYSWNTMIAAYVGSGNMSQAKELFDEMQEQ---- 211
K G V+ KVFE + KD L ++N +I +G + A EL D MQ+
Sbjct: 352 CLRKMGKVDEALKVFE-EMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFP 410
Query: 212 -----------------------------------DVVSWSTIIAGYVQVGCFMEALDFF 236
D +++ ++I G +VG +A +
Sbjct: 411 NVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVY 470
Query: 237 HRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKC 296
+ML + N + S + N + G I+ + + +LL + +D K
Sbjct: 471 EKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKA 530
Query: 297 GEIESASRVFWEHNAKRKV--------------------------------------WPW 318
GE E +F E A+R V +
Sbjct: 531 GEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAY 590
Query: 319 NAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVS 378
N +I GF GK ++A ++ ++MK + P VT+ ++++ + ++E + F S
Sbjct: 591 NIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 650
Query: 379 DYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSM---PMAPDVAIWGAVLNACRIYKDME 435
I + Y ++D + G + EA ++ + + P++ W ++L+A +++
Sbjct: 651 KR-IELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEIN 709
Query: 436 RGYRIGRIIKEMD--PNHVGCHVLLGNI 461
+ +KE+ PN V +L+ +
Sbjct: 710 EALVCFQSMKELKCTPNQVTYGILINGL 737
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/420 (22%), Positives = 183/420 (43%), Gaps = 36/420 (8%)
Query: 58 LVADASLSYAHKLFDQIPQ----PDLFIYNTMIKAHSLSPSSCNDSLM--VFRLLTR--D 109
L D + Q+ + PD+ YNT+I A+S + LM F L+
Sbjct: 245 LCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYS------SKGLMEEAFELMNAMPG 298
Query: 110 SGLSPNRYSF-VFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVE 168
G SP Y++ G C +G + ++V + ++ GL + +L+ K G V
Sbjct: 299 KGFSPGVYTYNTVINGLCKHG-KYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVV 357
Query: 169 YGRKVF----EWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQ----DVVSWSTII 220
KVF V DL +++M++ + SGN+ +A F+ ++E D V ++ +I
Sbjct: 358 ETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILI 417
Query: 221 AGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIK 280
GY + G A++ + MLQ G + T+ + L L + + + + +
Sbjct: 418 QGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALF 477
Query: 281 MNERLLASIIDMYAKCGEIESASRVFWEHNAKR---KVWPWNAMIGGFAMHGKPSEAIKV 337
+ L +ID + K G +++A +F + KR V +N ++ GF G A ++
Sbjct: 478 PDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEI 537
Query: 338 FQKMKVENVSPNKVTFVALLNA-CSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLL 396
+ M + + P +++ L+NA CS G++ E +++ ++ + I P + M+
Sbjct: 538 WADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKN--IKPTVMICNSMIKGY 595
Query: 397 SRAGLLKEAEDMISSM---PMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDPNHVG 453
R+G + E + M PD + ++ ++M + + ++K+M+ G
Sbjct: 596 CRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAF---GLVKKMEEEQGG 652
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/388 (22%), Positives = 175/388 (45%), Gaps = 32/388 (8%)
Query: 67 AHKLFDQIP----QPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSF-VF 121
A +L + +P P ++ YNT+I + VF + R SGLSP+ ++
Sbjct: 289 AFELMNAMPGKGFSPGVYTYNTVINGLC-KHGKYERAKEVFAEMLR-SGLSPDSTTYRSL 346
Query: 122 TFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVE----YGRKVFEWA 177
AC G V E E+V S + ++ ++++ ++ + G ++ Y V E
Sbjct: 347 LMEACKKG-DVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 178 VDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQ----DVVSWSTIIAGYVQVGCFMEAL 233
+ D + +I Y G +S A L +EM +Q DVV+++TI+ G + EA
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 465
Query: 234 DFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMY 293
F+ M + P+ YT + L L + + I+++ +++D +
Sbjct: 466 KLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGF 525
Query: 294 AKCGEIESASRVFWEHNAKRKVWP----WNAMIGGFAMHGKPSEAIKVFQKMKVENVSPN 349
K G+I++A + W +++ P ++ ++ G +EA +V+ +M +N+ P
Sbjct: 526 GKVGDIDTAKEI-WADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPT 584
Query: 350 KVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMV------DLLSRA-GLL 402
+ +++ +G+ + M+S+ G +P+ Y ++ + +S+A GL+
Sbjct: 585 VMICNSMIKGYCRSGNASDGESFLEKMISE-GFVPDCISYNTLIYGFVREENMSKAFGLV 643
Query: 403 KEAEDMISSMPMAPDVAIWGAVLNA-CR 429
K+ E+ + PDV + ++L+ CR
Sbjct: 644 KKMEE--EQGGLVPDVFTYNSILHGFCR 669
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 137/326 (42%), Gaps = 33/326 (10%)
Query: 122 TFGACGNGLSV---------QEGEQVRSHAVKVGLDSNVFVV-----NALIGMYGKWGLV 167
TF CG+ SV Q + +H L S F V NALIG + G V
Sbjct: 157 TFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWV 216
Query: 168 EYGRKVFEW----AVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQ----DVVSWSTI 219
E V++ V ++Y+ N M+ A G M + ++QE+ D+V+++T+
Sbjct: 217 ELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTL 276
Query: 220 IAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEI 279
I+ Y G EA + + M G P YT+ + + ++ K + + + R +
Sbjct: 277 ISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGL 336
Query: 280 KMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWP----WNAMIGGFAMHGKPSEAI 335
+ S++ K G++ +VF + + R V P +++M+ F G +A+
Sbjct: 337 SPDSTTYRSLLMEACKKGDVVETEKVFSDMRS-RDVVPDLVCFSSMMSLFTRSGNLDKAL 395
Query: 336 KVFQKMKVENVSPNKVTFVALLNA-CSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVD 394
F +K + P+ V + L+ C G + L ++ G ++ Y ++
Sbjct: 396 MYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEML--QQGCAMDVVTYNTILH 453
Query: 395 LLSRAGLLKEAEDMISSM---PMAPD 417
L + +L EA+ + + M + PD
Sbjct: 454 GLCKRKMLGEADKLFNEMTERALFPD 479
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 9/166 (5%)
Query: 282 NERLLASIIDMYAKCGEIESASRVFWEHNAKR---KVWPWNAMIGGFAMHGKPSEAIKVF 338
N+ + +I Y + ++ A F +K + NA+IG G A V+
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 339 QKMKVENVSPNKVTFVALLNA-CSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLS 397
Q++ V N T ++NA C G M + G F V + G+ P+I Y ++ S
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGT--FLSQVQEKGVYPDIVTYNTLISAYS 281
Query: 398 RAGLLKEAEDMISSMP---MAPDVAIWGAVLNACRIYKDMERGYRI 440
GL++EA +++++MP +P V + V+N + ER +
Sbjct: 282 SKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 327
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 152/367 (41%), Gaps = 48/367 (13%)
Query: 109 DSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVE 168
D G+SPN + + + G E E + K+GL N + LI M+ + G ++
Sbjct: 360 DFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLD 419
Query: 169 YGRKVFEWAVDKDL----YSWNTMIAAYVGSGNMSQAK----ELFDEMQEQDVVSWSTII 220
VD L Y +N++I + G++S A+ E+ ++ E VV++++++
Sbjct: 420 TALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLM 479
Query: 221 AGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIK 280
GY G +AL +H M G P+ YTF + L+ + + + + +K
Sbjct: 480 GGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVK 539
Query: 281 MNERLLASIIDMYAKCGEIESASRVFWEHNAKRKV---WPWNAMIGGFAMHGKPSEAIKV 337
N +I+ Y + G++ A E K V + + +I G + G+ SEA
Sbjct: 540 PNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVF 599
Query: 338 FQKMKVENVSPNKVTFVALLNA-CSHGY----------MVEEG----------------- 369
+ N N++ + LL+ C G MV+ G
Sbjct: 600 VDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLK 659
Query: 370 ----KLYFRLM--VSDYGIIPEIEHYGCMVDLLSRAGLLKEAE---DMISSMPMAPDVAI 420
KL+F L+ + D G+ P+ Y M+D S+ G KEA D++ + P+
Sbjct: 660 HKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVT 719
Query: 421 WGAVLNA 427
+ AV+N
Sbjct: 720 YTAVING 726
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/352 (21%), Positives = 154/352 (43%), Gaps = 20/352 (5%)
Query: 111 GLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALI-GMYGK---WGL 166
G+ P+ Y + + + +++ +H G D N+ N LI G+ K W
Sbjct: 222 GIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEA 281
Query: 167 VEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQ----EQDVVSWSTIIAG 222
V + + + D+ ++ T++ E+ DEM + S+++ G
Sbjct: 282 VGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEG 341
Query: 223 YVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMN 282
+ G EAL+ R++ G PN + + + + + + + + +G+ ++ N
Sbjct: 342 LRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPN 401
Query: 283 ERLLASIIDMYAKCGEIESASRVFWE---HNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQ 339
+ + +IDM+ + G++++A E K V+P+N++I G G S A
Sbjct: 402 DVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMA 461
Query: 340 KMKVENVSPNKVTFVALLNA-CSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSR 398
+M + + P VT+ +L+ CS G + + +LY + + GI P I + ++ L R
Sbjct: 462 EMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEM--TGKGIAPSIYTFTTLLSGLFR 519
Query: 399 AGLLKEAEDMISSMP---MAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEM 447
AGL+++A + + M + P+ + ++ DM + + +KEM
Sbjct: 520 AGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAF---EFLKEM 568
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/414 (20%), Positives = 174/414 (42%), Gaps = 50/414 (12%)
Query: 61 DASLSYAHKLFDQIPQPDLFIYNTMI-------KAHS------------LSPSSCNDSLM 101
+ +L+ ++ D P+LF+YN +I K H L P+ S++
Sbjct: 349 EEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSIL 408
Query: 102 VFRLLTR--------------DSGLSPNRYSF-VFTFGACGNGLSVQEGEQVRSHAVKVG 146
+ R D+GL + Y + G C G + E + +
Sbjct: 409 IDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFG-DISAAEGFMAEMINKK 467
Query: 147 LDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDK----DLYSWNTMIAAYVGSGNMSQAK 202
L+ V +L+G Y G + +++ K +Y++ T+++ +G + A
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAV 527
Query: 203 ELFDEMQEQDV----VSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAAC 258
+LF+EM E +V V+++ +I GY + G +A +F M + G P+ Y++ +
Sbjct: 528 KLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGL 587
Query: 259 SNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWE---HNAKRKV 315
+ K + +G ++NE ++ + + G++E A V E +
Sbjct: 588 CLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDL 647
Query: 316 WPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRL 375
+ +I G H + ++M + P+ V + ++++A S +E + L
Sbjct: 648 VCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDL 707
Query: 376 MVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSM-PMA--PDVAIWGAVLN 426
M+++ G +P Y +++ L +AG + EAE + S M P++ P+ +G L+
Sbjct: 708 MINE-GCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLD 760
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 155/368 (42%), Gaps = 32/368 (8%)
Query: 67 AHKLFDQIPQ----PDLFIYNTMIKAHSLSPSSCNDSLM--VFRLLTR--DSGLSPNRYS 118
A KLF+++ + P+ YN MI+ + C + M F L + G+ P+ YS
Sbjct: 526 AVKLFNEMAEWNVKPNRVTYNVMIEGY------CEEGDMSKAFEFLKEMTEKGIVPDTYS 579
Query: 119 F-VFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYG----RKV 173
+ G C G E + K + N L+ + + G +E +++
Sbjct: 580 YRPLIHGLCLTG-QASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEM 638
Query: 174 FEWAVDKDLYSWNTMIAAYVGSGN----MSQAKELFDEMQEQDVVSWSTIIAGYVQVGCF 229
+ VD DL + +I + + KE+ D + D V ++++I + G F
Sbjct: 639 VQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDF 698
Query: 230 MEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASI 289
EA + M+ G PNE T+ + + +++ + + S + N+
Sbjct: 699 KEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCF 758
Query: 290 IDMYAKCGEIESASRVFWEHNAKRK-----VWPWNAMIGGFAMHGKPSEAIKVFQKMKVE 344
+D+ K GE++ V HNA K +N +I GF G+ EA ++ +M +
Sbjct: 759 LDILTK-GEVDMQKAVEL-HNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGD 816
Query: 345 NVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKE 404
VSP+ +T+ ++N V++ + M ++ GI P+ Y ++ AG + +
Sbjct: 817 GVSPDCITYTTMINELCRRNDVKKAIELWNSM-TEKGIRPDRVAYNTLIHGCCVAGEMGK 875
Query: 405 AEDMISSM 412
A ++ + M
Sbjct: 876 ATELRNEM 883
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 154/349 (44%), Gaps = 16/349 (4%)
Query: 76 QPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEG 135
+PDL + +++ + + D++ +F + G PN ++ +
Sbjct: 150 EPDLVTFTSLLNGYC-HWNRIEDAIALFDQIL-GMGFKPNVVTYTTLIRCLCKNRHLNHA 207
Query: 136 EQVRSHAVKVGLDSNVFVVNALI-GM--YGKWGLVEYG-RKVFEWAVDKDLYSWNTMIAA 191
++ + G NV NAL+ G+ G+WG + R + + ++ ++ ++ +I A
Sbjct: 208 VELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDA 267
Query: 192 YVGSGNMSQAKELFDEMQEQ----DVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPN 247
+V G + +AKEL++ M + DV ++ ++I G G EA F+ M + G PN
Sbjct: 268 FVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPN 327
Query: 248 EYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFW 307
E + + + ++ G I + + + N +I Y G + A VF
Sbjct: 328 EVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFN 387
Query: 308 EHNAKR---KVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNA-CSHG 363
+ +++R + +N ++ G +GK +A+ +F+ M+ + N VT+ ++ C G
Sbjct: 388 QMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLG 447
Query: 364 YMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSM 412
+ + L+ L G+ P + Y M+ R GL+ EA+ + M
Sbjct: 448 KVEDAFDLFCSLFSK--GMKPNVITYTTMISGFCRRGLIHEADSLFKKM 494
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/380 (21%), Positives = 164/380 (43%), Gaps = 24/380 (6%)
Query: 70 LFDQ-----IPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFG 124
LF+Q IP P L N ++ LS C S + +++ G P+ +F
Sbjct: 105 LFEQMQILGIP-PLLCTCNIVMHCVCLSSQPCRASCFLGKMM--KLGFEPDLVTFTSLLN 161
Query: 125 ACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEW----AVDK 180
+ +++ + + +G NV LI K + + ++F
Sbjct: 162 GYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRP 221
Query: 181 DLYSWNTMIAAYVGSGNMSQAKELFDEMQ----EQDVVSWSTIIAGYVQVGCFMEALDFF 236
++ ++N ++ G A L +M E +V++++ +I +V+VG MEA + +
Sbjct: 222 NVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELY 281
Query: 237 HRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKC 296
+ M+Q+ P+ +T+ S + LD+ + + + R NE + ++I + K
Sbjct: 282 NVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKS 341
Query: 297 GEIESASRVFWEHNAKRKV---WPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTF 353
+E ++F+E + K V + +I G+ + G+P A +VF +M P+ T+
Sbjct: 342 KRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTY 401
Query: 354 VALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSM- 412
LL+ VE+ + F M I I Y ++ + + G +++A D+ S+
Sbjct: 402 NVLLDGLCCNGKVEKALMIFEYMRKREMDI-NIVTYTIIIQGMCKLGKVEDAFDLFCSLF 460
Query: 413 --PMAPDVAIWGAVLNA-CR 429
M P+V + +++ CR
Sbjct: 461 SKGMKPNVITYTTMISGFCR 480
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 137/311 (44%), Gaps = 17/311 (5%)
Query: 58 LVADASLSYAHKLFDQI----PQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLS 113
L + L++A +LF+Q+ +P++ YN ++ D+ + R + + +
Sbjct: 198 LCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLC-EIGRWGDAAWLLRDMMKRR-IE 255
Query: 114 PNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKV 173
PN +F A + E +++ + +++ + +VF +LI +GL++ R++
Sbjct: 256 PNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQM 315
Query: 174 FEWAVDKDLYS----WNTMIAAYVGSGNMSQAKELFDEMQEQDVV----SWSTIIAGYVQ 225
F Y + T+I + S + ++F EM ++ VV +++ +I GY
Sbjct: 316 FYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCL 375
Query: 226 VGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERL 285
VG A + F++M P+ T+ L +++ I ++ + E+ +N
Sbjct: 376 VGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVT 435
Query: 286 LASIIDMYAKCGEIESASRVF---WEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMK 342
II K G++E A +F + K V + MI GF G EA +F+KMK
Sbjct: 436 YTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMK 495
Query: 343 VENVSPNKVTF 353
+ PN+ +
Sbjct: 496 EDGFLPNESVY 506
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/436 (22%), Positives = 182/436 (41%), Gaps = 62/436 (14%)
Query: 59 VADASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPN--- 115
+A AS+ Y L I P++ Y +IK M ++L R G+ P+
Sbjct: 372 LATASVVYKRMLCQGI-SPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR--GMEPSIVT 428
Query: 116 RYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLV----EYGR 171
S + F CGN ++ G + +K+G +V + L+ K GL+ +
Sbjct: 429 YSSLIDGFCKCGN---LRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSV 485
Query: 172 KVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQ----EQDVVSWSTIIAGYVQVG 227
K+ ++ ++ +N++I + +A ++F M + DV +++T++ + G
Sbjct: 486 KMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEG 545
Query: 228 CFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLA 287
EAL F RM ++G +P+ + + + A + G + + R +I + +
Sbjct: 546 RLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCN 605
Query: 288 SIIDMYAKCGEIESASRVF---WEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVE 344
+I + KC IE AS+ F E + + +N MI G+ + EA ++F+ +KV
Sbjct: 606 VVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVT 665
Query: 345 NVSPNKVTFVALL--------------------------NACSHGYMVE--------EGK 370
PN VT L+ NA ++G +++ EG
Sbjct: 666 PFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGS 725
Query: 371 LYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRI 430
+ + GI P I Y ++D L + G + EA ++ AI +L
Sbjct: 726 FKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ-------AIDAKLLPDVVA 778
Query: 431 YKDMERGY-RIGRIIK 445
Y + RGY ++GR+++
Sbjct: 779 YAILIRGYCKVGRLVE 794
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 120/268 (44%), Gaps = 11/268 (4%)
Query: 146 GLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELF 205
G+ ++ FV++AL +++ R V E + S N ++ + + A L
Sbjct: 216 GVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKG-LSVDQIEVASRLL 274
Query: 206 ----DEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNL 261
D +VV++ T+I G+ + G A D F M Q G +P+ + + +
Sbjct: 275 SLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKA 334
Query: 262 VALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWE---HNAKRKVWPW 318
L G + S +K++ + +S ID+Y K G++ +AS V+ V +
Sbjct: 335 GMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTY 394
Query: 319 NAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNA-CSHGYMVEEGKLYFRLMV 377
+I G G+ EA ++ ++ + P+ VT+ +L++ C G + LY ++
Sbjct: 395 TILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI- 453
Query: 378 SDYGIIPEIEHYGCMVDLLSRAGLLKEA 405
G P++ YG +VD LS+ GL+ A
Sbjct: 454 -KMGYPPDVVIYGVLVDGLSKQGLMLHA 480
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 82/409 (20%), Positives = 167/409 (40%), Gaps = 52/409 (12%)
Query: 64 LSYAHKLFDQI----PQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSF 119
L HKLF Q + D+ ++++ I + S S++ R+L + G+SPN
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ--GISPN---- 390
Query: 120 VFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVD 179
V T+ GL Q+G + GMYG+ + + ++
Sbjct: 391 VVTYTILIKGLC-QDGR-----------------IYEAFGMYGQ---------ILKRGME 423
Query: 180 KDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQ----DVVSWSTIIAGYVQVGCFMEALDF 235
+ +++++I + GN+ L+++M + DVV + ++ G + G + A+ F
Sbjct: 424 PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRF 483
Query: 236 FHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAK 295
+ML + N F S + L D+ + +G IK + +++ +
Sbjct: 484 SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIM 543
Query: 296 CGEIESASRVF---WEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVT 352
G +E A +F ++ + + +I F H KP+ +++F M+ +S +
Sbjct: 544 EGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAV 603
Query: 353 FVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAE---DMI 409
+++ + +E+ +F ++ + P+I Y M+ L EAE +++
Sbjct: 604 CNVVIHLLFKCHRIEDASKFFNNLIEG-KMEPDIVTYNTMICGYCSLRRLDEAERIFELL 662
Query: 410 SSMPMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEM--DPNHV--GC 454
P P+ +++ DM+ R+ I+ E PN V GC
Sbjct: 663 KVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGC 711
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 149/350 (42%), Gaps = 26/350 (7%)
Query: 63 SLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFT 122
++ ++ K+ Q + ++ ++N++I + +++L VFRL+ G+ P+ +F
Sbjct: 480 AMRFSVKMLGQSIRLNVVVFNSLIDGWC-RLNRFDEALKVFRLMGI-YGIKPDVATFTTV 537
Query: 123 FGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEW----AV 178
++E + K+GL+ + LI + K G ++F+ +
Sbjct: 538 MRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKI 597
Query: 179 DKDLYSWNTMIAAYVGSGNMSQAKELFDEM----QEQDVVSWSTIIAGYVQVGCFMEALD 234
D+ N +I + A + F+ + E D+V+++T+I GY + EA
Sbjct: 598 SADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAER 657
Query: 235 FFHRMLQVGP-KPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMY 293
F +L+V P PN T + +D + S + K N ++D +
Sbjct: 658 IFE-LLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWF 716
Query: 294 AKCGEIESASRVFWEHNAK---RKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNK 350
+K +IE + ++F E K + ++ +I G G+ EA +F + + P+
Sbjct: 717 SKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDV 776
Query: 351 VTFVALLNA-CSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRA 399
V + L+ C G +VE LY ++ + G+ P+ DLL RA
Sbjct: 777 VAYAILIRGYCKVGRLVEAALLYEHMLRN--GVKPD--------DLLQRA 816
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 143/310 (46%), Gaps = 13/310 (4%)
Query: 61 DASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFV 120
D +L+ ++ ++ +PD+F Y+++I + S ++ ++ R ++PN +F
Sbjct: 275 DDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK--INPNVVTFS 332
Query: 121 FTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDK 180
A + E E++ +K +D ++F ++LI + ++ + +FE + K
Sbjct: 333 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 392
Query: 181 DLY----SWNTMIAAYVGSGNMSQAKELFDEMQEQ----DVVSWSTIIAGYVQVGCFMEA 232
D + +++T+I + + + + ELF EM ++ + V+++T+I G+ Q A
Sbjct: 393 DCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 452
Query: 233 LDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDM 292
F +M+ VG PN T+ L L + + ++ R ++ + +I+
Sbjct: 453 QMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEG 512
Query: 293 YAKCGEIESASRVFWEHNAK---RKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPN 349
K G++E +F + K V +N MI GF G EA + +KMK + PN
Sbjct: 513 MCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPN 572
Query: 350 KVTFVALLNA 359
T+ L+ A
Sbjct: 573 SGTYNTLIRA 582
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 150/348 (43%), Gaps = 52/348 (14%)
Query: 181 DLYSWNTMIAAYVGSGNMSQAKELFDEMQ----EQDVVSWSTIIAGYVQVGCFMEALDFF 236
DL ++ T++ G++ A L +M+ E DVV ++TII G + +AL+ F
Sbjct: 222 DLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLF 281
Query: 237 HRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKC 296
M G +P+ +T+ S ++ N + S + +I N +++ID + K
Sbjct: 282 TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 341
Query: 297 GEIESASRVFWEHNAKRKVWP----WNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVT 352
G++ A +++ E KR + P ++++I GF MH + EA +F+ M ++ PN VT
Sbjct: 342 GKLVEAEKLYDEM-IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 400
Query: 353 FVALLNACSHGYMVEEG-----------------------------------KLYFRLMV 377
+ L+ VEEG ++ F+ MV
Sbjct: 401 YSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 460
Query: 378 SDYGIIPEIEHYGCMVDLLSRAGLLKEAE---DMISSMPMAPDVAIWGAVLNA-CRIYKD 433
S G+ P I Y ++D L + G L +A + + M PD+ + ++ C+ K
Sbjct: 461 S-VGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK- 518
Query: 434 MERGYRI--GRIIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSE 479
+E G+ + +K + PN + + ++ + +L++ E
Sbjct: 519 VEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKE 566
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 140/323 (43%), Gaps = 48/323 (14%)
Query: 166 LVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQ----EQDVVSWSTIIA 221
++ G ++ + DLY+++ I + +S A + +M E D+V+ S+++
Sbjct: 102 VISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLN 161
Query: 222 GYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAA------CSNLVAL-DQ-------- 266
GY +A+ +M+++G KP+ +TF + + S VAL DQ
Sbjct: 162 GYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQP 221
Query: 267 -----GKWIHSFIGRGEIKMNERLLA---------------SIIDMYAKCGEIESASRVF 306
G ++ RG+I + LL +IID K ++ A +F
Sbjct: 222 DLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLF 281
Query: 307 WEHNAK---RKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNA-CSH 362
E + K V+ ++++I +G+ S+A ++ M ++PN VTF AL++A
Sbjct: 282 TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 341
Query: 363 GYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSM---PMAPDVA 419
G +VE KLY ++ I P+I Y +++ L EA+ M M P+V
Sbjct: 342 GKLVEAEKLYDEMI--KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 399
Query: 420 IWGAVLNACRIYKDMERGYRIGR 442
+ ++ K +E G + R
Sbjct: 400 TYSTLIKGFCKAKRVEEGMELFR 422
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 91/445 (20%), Positives = 191/445 (42%), Gaps = 21/445 (4%)
Query: 15 DHCCRLASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLK--LVADASLSYAHKLFD 72
D C+ + + K +++K H + +LI+ + K +V DA + ++ D
Sbjct: 257 DGYCKAGNPEKSFKVRERMKADH---IEPSLITFNTLLKGLFKAGMVEDAE-NVLKEMKD 312
Query: 73 QIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSV 132
PD F ++ + +S S +L V+ DSG+ N Y+ A +
Sbjct: 313 LGFVPDAFTFSILFDGYS-SNEKAEAALGVYETAV-DSGVKMNAYTCSILLNALCKEGKI 370
Query: 133 QEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFE----WAVDKDLYSWNTM 188
++ E++ + GL N + N +I Y + G + R E + D ++N +
Sbjct: 371 EKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCL 430
Query: 189 IAAYVGSGNMSQAKELFDEMQ----EQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGP 244
I + G M A++ ++M+ V +++ +I GY + F + D M G
Sbjct: 431 IRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGT 490
Query: 245 KPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESA-- 302
PN ++ + + L + + + + + R+ +ID G+IE A
Sbjct: 491 MPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFR 550
Query: 303 -SRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACS 361
S+ + + + +N +I G +M GK SEA + ++ + + P+ T+ +L++
Sbjct: 551 FSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYG 610
Query: 362 HGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIW 421
V+ + M GI P ++ Y ++ L ++ G+ + E + M + PD+ ++
Sbjct: 611 FAGNVQRCIALYEEMKRS-GIKPTLKTYHLLISLCTKEGI-ELTERLFGEMSLKPDLLVY 668
Query: 422 GAVLNACRIYKDMERGYRIGRIIKE 446
VL+ ++ DME+ + + + + E
Sbjct: 669 NGVLHCYAVHGDMEKAFNLQKQMIE 693
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 110/492 (22%), Positives = 191/492 (38%), Gaps = 110/492 (22%)
Query: 43 TALISHHVSANKFLKLVADASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMV 102
T L+ H V +F ++ + L+ F +P F+Y I+A ++ S L +
Sbjct: 148 TLLLDHLVKTKQF-RVTINVFLNILESDF----RPSKFMYGKAIQA-AVKLSDVGKGLEL 201
Query: 103 FRLLTRDSGLSPNRYSF-VFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMY 161
F + D + P+ + + V G C G + + EQ+ + L ++ N LI Y
Sbjct: 202 FNRMKHDR-IYPSVFIYNVLIDGLC-KGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGY 259
Query: 162 GKWGLVEYGRKVFEWA----VDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQE----QDV 213
K G E KV E ++ L ++NT++ +G + A+ + EM++ D
Sbjct: 260 CKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDA 319
Query: 214 VSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSF 273
++S + GY AL + + G K N YT L A +++ + I
Sbjct: 320 FTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEI--- 376
Query: 274 IGRGEIK---MNERLLASIIDMYAKCGEIESAS----------------------RVFWE 308
+GR K NE + ++ID Y + G++ A R F E
Sbjct: 377 LGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCE 436
Query: 309 ----HNAKRKV------------WPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVT 352
NA+++V +N +IGG+ + + + ++M+ PN V+
Sbjct: 437 LGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVS 496
Query: 353 FVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHY-----GC---------------- 391
+ L+N G + E ++ R M D G+ P++ Y GC
Sbjct: 497 YGTLINCLCKGSKLLEAQIVKRDM-EDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEM 555
Query: 392 --------------MVDLLSRAGLLKEAEDM---ISSMPMAPDVAIW----------GAV 424
++D LS G L EAED+ IS + PDV + G V
Sbjct: 556 LKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNV 615
Query: 425 LNACRIYKDMER 436
+Y++M+R
Sbjct: 616 QRCIALYEEMKR 627
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 133/297 (44%), Gaps = 20/297 (6%)
Query: 198 MSQAKELFDEMQEQDVV----SWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVS 253
+S+A +LF ++ + + S + ++ V+ F ++ F +L+ +P+++ +
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184
Query: 254 ALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKR 313
A+ A L + +G + + + I + + +ID K + A ++F E A+R
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244
Query: 314 ---KVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGK 370
+ +N +I G+ G P ++ KV ++MK +++ P+ +TF LL MVE+ +
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304
Query: 371 LYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAI------WGAV 424
+ M D G +P+ + + D S ++AE + A D + +
Sbjct: 305 NVLKEM-KDLGFVPDAFTFSILFDGYSSN---EKAEAALGVYETAVDSGVKMNAYTCSIL 360
Query: 425 LNACRIYKDMERGYRI-GR-IIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSE 479
LNA +E+ I GR + K + PN V + ++ Y G ARM E E
Sbjct: 361 LNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDG-YCRKGDLVGARMKIEAME 416
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 124/290 (42%), Gaps = 11/290 (3%)
Query: 76 QPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEG 135
+PD YN +I+ N V ++ + G+SP+ ++ G G +
Sbjct: 421 KPDHLAYNCLIRRFCELGEMENAEKEVNKMKLK--GVSPSVETYNILIGGYGRKYEFDKC 478
Query: 136 EQVRSHAVKVGLDSNVFVVNALIGMYGKWG-LVE---YGRKVFEWAVDKDLYSWNTMIAA 191
+ G NV LI K L+E R + + V + +N +I
Sbjct: 479 FDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDG 538
Query: 192 YVGSGNMSQA----KELFDEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPN 247
G + A KE+ + E ++V+++T+I G G EA D + + G KP+
Sbjct: 539 CCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPD 598
Query: 248 EYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFW 307
+T+ S ++ + + ++ + R IK + +I + K G IE R+F
Sbjct: 599 VFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-IELTERLFG 657
Query: 308 EHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALL 357
E + K + +N ++ +A+HG +A + ++M +++ +K T+ +L+
Sbjct: 658 EMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLI 707
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/459 (20%), Positives = 191/459 (41%), Gaps = 64/459 (13%)
Query: 34 KQTHAQLVTTALISHHVSANKFLKLVADASLSYAHKLFDQIP----QPDLFIYNTMIKAH 89
KQ ++ + ++ + + N F + LSYA +I +PD I+NT++
Sbjct: 112 KQMESKGIAHSIYTLSIMINCFCRC---RKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGL 168
Query: 90 SLSPSSCNDSLMVFRLLTRDSGLSPNRYSF-VFTFGACGNGLSVQEGEQVRSHAVKVGLD 148
L +V R++ + G P + G C NG V + + V+ G
Sbjct: 169 CLECRVSEALELVDRMV--EMGHKPTLITLNTLVNGLCLNG-KVSDAVVLIDRMVETGFQ 225
Query: 149 SNVFVVNALIGMYGKWG----LVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKEL 204
N ++ + K G +E RK+ E + D ++ +I G++ A L
Sbjct: 226 PNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNL 285
Query: 205 FDEMQ----EQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSN 260
F+EM+ + D+++++T+I G+ G + + M++ PN TF
Sbjct: 286 FNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTF--------- 336
Query: 261 LVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWP--- 317
I SF+ G+++ ++LL ++ +R + P
Sbjct: 337 ------SVLIDSFVKEGKLREADQLLKEMM---------------------QRGIAPNTI 369
Query: 318 -WNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLM 376
+N++I GF + EAI++ M + P+ +TF L+N +++G FR M
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM 429
Query: 377 VSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSM---PMAPDVAIWGAVLNACRIYKD 433
S G+I Y +V ++G L+ A+ + M + PD+ + +L+ +
Sbjct: 430 -SLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGE 488
Query: 434 MERGYRI-GRIIKEMDPNHVGCHVLLGNIYSSSGRWNDA 471
+E+ I G+I K +G ++++ + ++ + +DA
Sbjct: 489 LEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDA 527
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 160/367 (43%), Gaps = 47/367 (12%)
Query: 67 AHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSF-VFTFGA 125
A LF +IP+P++ I+NT+I ++ +D+ V + G+ P+ ++ +G
Sbjct: 341 AKDLFYRIPKPEIVIFNTLIHGF-VTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGY 399
Query: 126 CGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVF-EWAVD---KD 181
GL V +V G NV+ L+ + K G ++ V E + D +
Sbjct: 400 WKEGL-VGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPN 458
Query: 182 LYSWNTMIAAYVGSGNMSQAKELFDEMQEQ----DVVSWSTIIAGYVQVGCFMEALDFFH 237
+N +I+A+ + +A E+F EM + DV +++++I+G +V AL
Sbjct: 459 TVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLR 518
Query: 238 RMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIK---------------MN 282
M+ G N T+ I++F+ RGEIK ++
Sbjct: 519 DMISEGVVANTVTY---------------NTLINAFLRRGEIKEARKLVNEMVFQGSPLD 563
Query: 283 ERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWP----WNAMIGGFAMHGKPSEAIKVF 338
E S+I + GE++ A R +E + P N +I G G EA++
Sbjct: 564 EITYNSLIKGLCRAGEVDKA-RSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQ 622
Query: 339 QKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSR 398
++M + +P+ VTF +L+N +E+G FR + ++ GI P+ + ++ L +
Sbjct: 623 KEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAE-GIPPDTVTFNTLMSWLCK 681
Query: 399 AGLLKEA 405
G + +A
Sbjct: 682 GGFVYDA 688
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 100/453 (22%), Positives = 189/453 (41%), Gaps = 59/453 (13%)
Query: 61 DASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRD--SGLSPNRYS 118
D++LS + P+ IY T+I HSLS CN +LL G P+ +
Sbjct: 234 DSALSLLRDMTKHGCVPNSVIYQTLI--HSLS--KCNRVNEALQLLEEMFLMGCVPDAET 289
Query: 119 FV-FTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWA 177
F G C + E ++ + + G + L+ K G V+ + +F
Sbjct: 290 FNDVILGLCKFD-RINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI 348
Query: 178 VDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQ-----DVVSWSTIIAGYVQVGCFMEA 232
++ +NT+I +V G + AK + +M DV +++++I GY + G A
Sbjct: 349 PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA 408
Query: 233 LDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDM 292
L+ H M G KPN Y++ ++D
Sbjct: 409 LEVLHDMRNKGCKPNVYSY-----------------------------------TILVDG 433
Query: 293 YAKCGEIESASRVFWEHNA---KRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPN 349
+ K G+I+ A V E +A K +N +I F + EA+++F++M + P+
Sbjct: 434 FCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPD 493
Query: 350 KVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMI 409
TF +L++ ++ R M+S+ G++ Y +++ R G +KEA ++
Sbjct: 494 VYTFNSLISGLCEVDEIKHALWLLRDMISE-GVVANTVTYNTLINAFLRRGEIKEARKLV 552
Query: 410 SSMPM--AP-DVAIWGAVLNA-CRIYK-DMERGYRIGRIIKEMDPNHVGCHVLLGNIYSS 464
+ M +P D + +++ CR + D R + P+++ C++L+ N
Sbjct: 553 NEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILI-NGLCR 611
Query: 465 SGRWNDARMLREKSEISTATKKIPGCSSIELNG 497
SG +A +++ + +T I +S+ +NG
Sbjct: 612 SGMVEEAVEFQKEMVLRGSTPDIVTFNSL-ING 643
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/363 (21%), Positives = 165/363 (45%), Gaps = 17/363 (4%)
Query: 64 LSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTF 123
LS K+ +PD ++N +I A S S + + ++ +F + ++SG P +F
Sbjct: 374 LSLISKVEKNGLKPDTILFNAIINASSES-GNLDQAMKIFEKM-KESGCKPTASTFNTLI 431
Query: 124 GACGNGLSVQEGEQVRSHAVKVG-LDSNVFVVNALIGMYGKWGLVEYG----RKVFEWAV 178
G ++E ++ ++ L N N L+ + +E K+ + V
Sbjct: 432 KGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGV 491
Query: 179 DKDLYSWNTMIAAYVGSGNMSQAKEL-----FDEMQEQDVVSWSTIIAGYVQVGCFMEAL 233
D+ ++NT+ AY G+ A+++ + +V + TI+ GY + G EAL
Sbjct: 492 KPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEAL 551
Query: 234 DFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMY 293
FF+RM ++G PN + F S + N+ +D + + +K + +++++ +
Sbjct: 552 RFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAW 611
Query: 294 AKCGEIESASRVF---WEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNK 350
+ G+++ ++ E + ++ + G+A G+P +A ++ +M+ V PN
Sbjct: 612 SSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNV 671
Query: 351 VTFVALLNA-CSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMI 409
V + +++ CS G M + ++Y + M G+ P + Y ++ A +AE+++
Sbjct: 672 VIYTQIISGWCSAGEMKKAMQVY-KKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELL 730
Query: 410 SSM 412
M
Sbjct: 731 KDM 733
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 90/409 (22%), Positives = 175/409 (42%), Gaps = 63/409 (15%)
Query: 128 NGLSVQEGEQVRSHAV---------KVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAV 178
NGL ++ G +H++ K L + +V AL L+ KV + +
Sbjct: 327 NGL-IERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGL 385
Query: 179 DKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQ----DVVSWSTIIAGYVQVG------- 227
D +N +I A SGN+ QA ++F++M+E +++T+I GY ++G
Sbjct: 386 KPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSR 445
Query: 228 -----------------CFM------------EALDFFHRMLQVGPKPNEYTFVSALAAC 258
C + EA + ++M G KP+ TF + A
Sbjct: 446 LLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAY 505
Query: 259 SNLVALDQGK-WIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFW---EHNAKRK 314
+ + + + I + ++K N R +I++ Y + G++E A R F+ E
Sbjct: 506 ARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPN 565
Query: 315 VWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSH-GYMVEEGKLYF 373
++ +N++I GF +V M+ V P+ VTF L+NA S G M ++Y
Sbjct: 566 LFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYT 625
Query: 374 RLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSM---PMAPDVAIWGAVLNACRI 430
++ + GI P+I + + +RAG ++AE +++ M + P+V I+ +++
Sbjct: 626 DML--EGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCS 683
Query: 431 YKDMERGYRIGRI---IKEMDPNHVGCHVLLGNIYSSSGRWNDARMLRE 476
+M++ ++ + I + PN L+ + W +L++
Sbjct: 684 AGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKD 732
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 130/292 (44%), Gaps = 52/292 (17%)
Query: 76 QPDLFIYNTMIKAHSLSPSSCN-DSLMVFRLLTRDSGLSPN-RYSFVFTFGACGNGLSVQ 133
+PD+ +NT+ KA++ S+C + +++ R+L + + PN R G C G ++
Sbjct: 492 KPDVVTFNTLAKAYARIGSTCTAEDMIIPRML--HNKVKPNVRTCGTIVNGYCEEG-KME 548
Query: 134 EGEQVRSHAVKVGLDSNVFVVNALIGMYGKW----GLVEYGRKVFEWAVDKDLYSWNTMI 189
E + ++G+ N+FV N+LI + G+ E + E+ V D+ +++T++
Sbjct: 549 EALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLM 608
Query: 190 AAYVGSGNMSQAKELFDEMQE----QDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPK 245
A+ G+M + +E++ +M E D+ ++S + GY + G +A ++M + G +
Sbjct: 609 NAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVR 668
Query: 246 PNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRV 305
PN + II + GE++ A +V
Sbjct: 669 PNVVIYTQ-----------------------------------IISGWCSAGEMKKAMQV 693
Query: 306 FWEHNAKRKVWP----WNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTF 353
+ + + P + +I GF +P +A ++ + M+ +NV P + T
Sbjct: 694 YKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTM 745
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/344 (19%), Positives = 131/344 (38%), Gaps = 53/344 (15%)
Query: 181 DLYSWNTMIAAYVGSGNMSQAKELFDEMQEQ----DVVSWSTIIAGYVQVGCFMEALDFF 236
D+ S ++ + G +A +F+ + E+ +++++T++ + F L
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 237 HRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKC 296
++ + G KP+ F + + A S LDQ I + K ++I Y K
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 297 GEIESASRVFWEHNAKRKVWP----WNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVT 352
G++E +SR+ + P N ++ + K EA + KM+ V P+ VT
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 353 FVALLNA-------------------------------------CSHGYMVEEGKLYFRL 375
F L A C G M E + ++R+
Sbjct: 498 FNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRM 557
Query: 376 MVSDYGIIPEIEHYGCMVD---LLSRAGLLKEAEDMISSMPMAPDVAIWGAVLNACRIYK 432
+ G+ P + + ++ ++ + E D++ + PDV + ++NA
Sbjct: 558 --KELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVG 615
Query: 433 DMERGYRIGRIIKE--MDPNHVGCHVLLGNIYSSSGRWNDARML 474
DM+R I + E +DP+ + +L Y+ +G A +
Sbjct: 616 DMKRCEEIYTDMLEGGIDPD-IHAFSILAKGYARAGEPEKAEQI 658
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 107/464 (23%), Positives = 195/464 (42%), Gaps = 42/464 (9%)
Query: 40 LVTTALISHHVSANKFLKLVADASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDS 99
++ T LI + ++F DA + ++ +Q PD+F YN++I LS + D
Sbjct: 453 VIYTTLIKTFLQNSRF----GDA-MRVLKEMKEQGIAPDIFCYNSLIIG--LSKAKRMDE 505
Query: 100 LMVFRLLTRDSGLSPNRYSFVFTFGACGNGL----SVQEGEQVRSHAVKVGLDSNVFVVN 155
F + ++GL PN FT+GA +G ++ + G+ N +
Sbjct: 506 ARSFLVEMVENGLKPN----AFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCT 561
Query: 156 ALIGMYGKWGLVEYGRKVFEWAVDK----DLYSWNTMIAAYVGSGNMSQAKELFDEMQEQ 211
LI Y K G V + VD+ D ++ ++ + + A+E+F EM+ +
Sbjct: 562 GLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGK 621
Query: 212 ----DVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQG 267
DV S+ +I G+ ++G +A F M++ G PN + L +++
Sbjct: 622 GIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKA 681
Query: 268 KWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRKV---WPWNAMIGG 324
K + + + N +IID Y K G++ A R+F E K V + + ++ G
Sbjct: 682 KELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDG 741
Query: 325 FAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLN-ACSHGYMVEEGKLYFRLMVSDYGII 383
AI +F K + + + F AL+N G + ++ RLM +
Sbjct: 742 CCRLNDVERAITIFGTNK-KGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRF 800
Query: 384 --PEIEHYGCMVDLLSRAGLLKEAEDMISSMPMA---PDVAIWGAVLNACRIYKDMERGY 438
P Y M+D L + G L+ A+++ M A P V + ++LN Y M R
Sbjct: 801 GKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNG---YDKMGRRA 857
Query: 439 RIGRIIKE-----MDPNHVGCHVLLGNIYSSSGRWNDARMLREK 477
+ + E ++P+H+ V++ N + G A +L ++
Sbjct: 858 EMFPVFDEAIAAGIEPDHIMYSVII-NAFLKEGMTTKALVLVDQ 900
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 155/362 (42%), Gaps = 60/362 (16%)
Query: 183 YSWNTMIAAYVGSGNMSQAKELFDEMQEQ----DVVSWSTIIAGYVQVGCFMEALDFFHR 238
Y++ T++ SG++ A + EM +VV ++T+I ++Q F +A+
Sbjct: 418 YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKE 477
Query: 239 MLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGE 298
M + G P+ + + S + S +D+ + SF +++M
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEAR---SF---------------LVEMV----- 514
Query: 299 IESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLN 358
E+ K + + A I G+ + + A K ++M+ V PNKV L+N
Sbjct: 515 ---------ENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLIN 565
Query: 359 A-CSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSM---PM 414
C G ++E Y R MV D GI+ + + Y +++ L + + +AE++ M +
Sbjct: 566 EYCKKGKVIEACSAY-RSMV-DQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI 623
Query: 415 APDVAIWGAVLNACRIYKDMERGYRI-GRIIKE-MDPNHVGCHVLLGNIYSSSGRWNDAR 472
APDV +G ++N +M++ I +++E + PN + ++LLG + SG A+
Sbjct: 624 APDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGG-FCRSGEIEKAK 682
Query: 473 -MLREKSEISTATKKIPGCSSIELNGTFYQFLVGDRSHPQSRELYSFLDEMTTKLKIAGY 531
+L E S + C+ I+ G E + DEM K+ G
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIID----------GYCKSGDLAEAFRLFDEM----KLKGL 728
Query: 532 VP 533
VP
Sbjct: 729 VP 730
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 133/349 (38%), Gaps = 51/349 (14%)
Query: 29 SIQQIKQTHAQLVTTALISHHVSANKFLK-LVADASLSYAHKLFDQIP----QPDLFIYN 83
++Q+ ++V L + + N L + A +L D++ P+ Y
Sbjct: 642 NMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYC 701
Query: 84 TMIKAHSLSPSSCNDSLMVFRLL--TRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSH 141
T+I + S D FRL + GL P+ + + C V+ +
Sbjct: 702 TIIDGYCKS----GDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT 757
Query: 142 AVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDL--------YSWNTMIAAYV 193
K G S+ NALI K+G E +V +D ++N MI
Sbjct: 758 NKK-GCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLC 816
Query: 194 GSGNMSQAKELFDEMQEQD----VVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEY 249
GN+ AKELF +MQ + V+++++++ GY ++G E F + G +P+
Sbjct: 817 KEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHI 876
Query: 250 TFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEH 309
+ I++F+ G M + L + M+AK +
Sbjct: 877 MY---------------SVIINAFLKEG---MTTKALVLVDQMFAKNA---------VDD 909
Query: 310 NAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLN 358
K + A++ GFA G+ A KV + M P+ T + L+N
Sbjct: 910 GCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELIN 958
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 148/358 (41%), Gaps = 49/358 (13%)
Query: 111 GLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYG 170
G SPN + C +++ + + K+GL +N LI K G+ + G
Sbjct: 193 GFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQG 252
Query: 171 RKVFEW----AVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQ----DVVSWSTIIAG 222
+++E V +LY++N ++ G A ++FDEM+E+ ++V+++T+I G
Sbjct: 253 FEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGG 312
Query: 223 YVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMN 282
+ EA +M G PN T+ I F G G
Sbjct: 313 LCREMKLNEANKVVDQMKSDGINPNLITY---------------NTLIDGFCGVG----- 352
Query: 283 ERLLASIIDMYAKCGEIESASRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMK 342
K G+ S R + +N ++ GF G S A K+ ++M+
Sbjct: 353 ------------KLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEME 400
Query: 343 VENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLL 402
+ P+KVT+ L++ + +E+ + RL + + G++P++ Y ++ G +
Sbjct: 401 ERGIKPSKVTYTILIDTFARSDNMEKA-IQLRLSMEELGLVPDVHTYSVLIHGFCIKGQM 459
Query: 403 KEAEDMISSM---PMAPDVAIWGA-VLNACRIYKDMERGYRIGRIIKEMDPNHVGCHV 456
EA + SM P+ I+ +L C+ YR +++KEM+ + +V
Sbjct: 460 NEASRLFKSMVEKNCEPNEVIYNTMILGYCK----EGSSYRALKLLKEMEEKELAPNV 513
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/349 (20%), Positives = 145/349 (41%), Gaps = 46/349 (13%)
Query: 181 DLYSWNTMIAAYVGSGNMSQAKELFDEMQE----QDVVSWSTIIAGYVQVGCFMEALDFF 236
D+YS+ +I +G + ++ +L E+ E +VV ++T+I G + G +A D F
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 237 HRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKC 296
M ++G NE T+ + QG ++ + + N +++ K
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281
Query: 297 GEIESASRVFWEHNAKR---KVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTF 353
G + A +VF E + + +N +IGG K +EA KV +MK + ++PN +T+
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341
Query: 354 VALLNA-CSHGYM--------------VEEGKLYFRLMVSDY------------------ 380
L++ C G + + + + ++VS +
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE 401
Query: 381 -GIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMP---MAPDVAIWGAVLNACRIYKDMER 436
GI P Y ++D +R+ +++A + SM + PDV + +++ I M
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNE 461
Query: 437 GYRIGR--IIKEMDPNHVGCHVLLGNIYSSSGRWNDARMLREKSEISTA 483
R+ + + K +PN V + ++ + ++L+E E A
Sbjct: 462 ASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELA 510
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 178/403 (44%), Gaps = 31/403 (7%)
Query: 97 NDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNA 156
+ +L VF+ + G P S+ A + E + ++ G+ N+ N
Sbjct: 95 DQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNV 154
Query: 157 LIGMYGKWGLVEYGRKVFEW----AVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQ- 211
LI M K E R +W D++S++T+I +G + A ELFDEM E+
Sbjct: 155 LIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERG 214
Query: 212 ---DVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGP-KPNEYT---FVSALAACSNLVAL 264
DV ++ +I G+++ A++ + R+L+ PN T +S L+ C +
Sbjct: 215 VAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGR---V 271
Query: 265 DQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKR---KVWPWNAM 321
D I + + E + + +S+I G ++ A VF E + ++ V +N M
Sbjct: 272 DDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTM 331
Query: 322 IGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYG 381
+GGF GK E++++++ M+ +N S N V++ L+ ++E + +RLM + G
Sbjct: 332 LGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAK-G 389
Query: 382 IIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAP---DVAIWGAVLNACRIYKDMERGY 438
+ YG + L G + +A ++ + + DV + ++++ K +E
Sbjct: 390 YAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEA- 448
Query: 439 RIGRIIKEMDPNHVG-----CHVLLGNIYSSSGRWNDARMLRE 476
++KEM + V C+ L+G + S + LRE
Sbjct: 449 --SNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLRE 489
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 137/325 (42%), Gaps = 18/325 (5%)
Query: 82 YNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSF-VFTFGACGNGLSVQEGEQVRS 140
YN +IK L +++ M++RL+ G + ++ ++ +F G C NG V + V
Sbjct: 362 YNILIKG-LLENGKIDEATMIWRLMPA-KGYAADKTTYGIFIHGLCVNGY-VNKALGVMQ 418
Query: 141 HAVKVGLDSNVFVVNALIGMYGKWGLVEYG----RKVFEWAVDKDLYSWNTMIAAYVGSG 196
G +V+ ++I K +E +++ + V+ + + N +I +
Sbjct: 419 EVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDS 478
Query: 197 NMSQAKELFDEMQEQ----DVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFV 252
+ +A EM + VVS++ +I G + G F EA F ML+ G KP+ T+
Sbjct: 479 RLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYS 538
Query: 253 SALAACSNLVALDQGKWI-HSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVF--WEH 309
L +D + H F+ G ++ + + +I G+++ A V EH
Sbjct: 539 ILLCGLCRDRKIDLALELWHQFLQSG-LETDVMMHNILIHGLCSVGKLDDAMTVMANMEH 597
Query: 310 -NAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEE 368
N + +N ++ GF G + A ++ M + P+ +++ ++ V
Sbjct: 598 RNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSY 657
Query: 369 GKLYFRLMVSDYGIIPEIEHYGCMV 393
+F ++GI P + + +V
Sbjct: 658 AMEFFD-DARNHGIFPTVYTWNILV 681
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 153/326 (46%), Gaps = 23/326 (7%)
Query: 164 WGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQD----VVSWSTI 219
WG + ++ + ++Y +N ++ + GN+S A+++FDE+ ++ VVS++T+
Sbjct: 225 WG---FYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTL 281
Query: 220 IAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEI 279
I GY +VG E H+M + +P+ +T+ + + A +D + + + +
Sbjct: 282 INGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGL 341
Query: 280 KMNERLLASIIDMYAKCGEIESASRVFWEHNAK---RKVWPWNAMIGGFAMHGKPSEAIK 336
N+ + ++I +++ GEI+ + + +K + +N ++ GF +G A
Sbjct: 342 IPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARN 401
Query: 337 VFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLL 396
+ M + P+K+T+ L++ G VE L R + GI + + +V +
Sbjct: 402 IVDGMIRRGLRPDKITYTTLIDGFCRGGDVETA-LEIRKEMDQNGIELDRVGFSALVCGM 460
Query: 397 SRAGLLKEAEDMISSMPMA---PDVAIWGAVLNACRIYKDMERGYRIGRIIKEMD----- 448
+ G + +AE + M A PD + +++A D + G+ +++KEM
Sbjct: 461 CKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGF---KLLKEMQSDGHV 517
Query: 449 PNHVGCHVLLGNIYSSSGRWNDARML 474
P+ V +VLL N G+ +A ML
Sbjct: 518 PSVVTYNVLL-NGLCKLGQMKNADML 542
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 137/309 (44%), Gaps = 28/309 (9%)
Query: 143 VKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDKDL----YSWNTMIAAYVGSGNM 198
+ G NV+V N L+ + K G + +KVF+ + L S+NT+I Y GN+
Sbjct: 232 LDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNL 291
Query: 199 SQAKELFDEMQEQ----DVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSA 254
+ L +M++ DV ++S +I + A F M + G PN+ F +
Sbjct: 292 DEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTL 351
Query: 255 LAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKRK 314
+ S +D K + + ++ + L ++++ + K G++ A+R + +R
Sbjct: 352 IHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDL-VAARNIVDGMIRRG 410
Query: 315 VWP----WNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALL-NACSHGYMVEEG 369
+ P + +I GF G A+++ ++M + ++V F AL+ C G +++
Sbjct: 411 LRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAE 470
Query: 370 KLYFRLMVSDYGIIPEIEHYGCMVDLLSRAG-------LLKEAEDMISSMPMAPDVAIWG 422
+ ++ + GI P+ Y M+D + G LLKE + S P V +
Sbjct: 471 RALREMLRA--GIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQ----SDGHVPSVVTYN 524
Query: 423 AVLNA-CRI 430
+LN C++
Sbjct: 525 VLLNGLCKL 533
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/397 (21%), Positives = 158/397 (39%), Gaps = 62/397 (15%)
Query: 18 CRLASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKL-VADASLSYAHKLFDQIPQ 76
C+ ++ D K +I + Q ++S + N + K+ D H++ +
Sbjct: 251 CKEGNISDAQKVFDEITKRSLQ---PTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTR 307
Query: 77 PDLFIYNTMIKAHSLSPSSCNDSLM-----VFRLLTRDSGLSPNRYSF-VFTFGACGNGL 130
PD+F Y+ +I A C ++ M +F + + GL PN F G NG
Sbjct: 308 PDVFTYSALINA------LCKENKMDGAHGLFDEMCK-RGLIPNDVIFTTLIHGHSRNG- 359
Query: 131 SVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDK----DLYSWN 186
+ ++ + GL ++ + N L+ + K G + R + + + + D ++
Sbjct: 360 EIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYT 419
Query: 187 TMIAAYVGSGNMSQAKELFDEMQ----EQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQV 242
T+I + G++ A E+ EM E D V +S ++ G + G ++A ML+
Sbjct: 420 TLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRA 479
Query: 243 GPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESA 302
G KP++ T+ + A F +G+ + +LL E++S
Sbjct: 480 GIKPDDVTYTMMMDA---------------FCKKGDAQTGFKLLK----------EMQSD 514
Query: 303 SRVFWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSH 362
V V +N ++ G G+ A + M V P+ +T+ LL H
Sbjct: 515 GHV-------PSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG--H 565
Query: 363 GYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRA 399
K Y + + GI+ ++ Y +V+ L RA
Sbjct: 566 HRHANSSKRY--IQKPEIGIVADLASYKSIVNELDRA 600
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 153/349 (43%), Gaps = 21/349 (6%)
Query: 61 DASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFV 120
D +L+ ++ ++ +PD+F Y+++I + S ++ +L R ++PN +F
Sbjct: 257 DDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK--INPNVVTFN 314
Query: 121 FTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDK 180
A + E E++ ++ +D N+ N+LI + ++ +++F V K
Sbjct: 315 SLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSK 374
Query: 181 D----LYSWNTMIAAYVGSGNMSQAKELFDEMQEQ----DVVSWSTIIAGYVQVGCFMEA 232
D + ++NT+I + + + ELF +M + + V+++T+I G+ Q A
Sbjct: 375 DCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNA 434
Query: 233 LDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDM 292
F +M+ G PN T+ + L L++ + ++ + +++ + + +
Sbjct: 435 QMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEG 494
Query: 293 YAKCGEIESASRVFWE---HNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPN 349
K G++E +F K V +N MI GF G EA +F KMK + P+
Sbjct: 495 MCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPD 554
Query: 350 KVTFVALL--------NACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYG 390
T+ L+ A S + E F S YG++ ++ H G
Sbjct: 555 SGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDG 603
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 185/413 (44%), Gaps = 39/413 (9%)
Query: 64 LSYAHKLFDQIP----QPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSF 119
+S A L DQ+ QPD + T++ + +V R++ + G P+
Sbjct: 151 ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK--GCQPD---- 204
Query: 120 VFTFGACGNGLSVQEGE-----QVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVF 174
+ T+GA NGL + GE + + K ++++V + + +I K+ V+ +F
Sbjct: 205 LVTYGAVINGL-CKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLF 263
Query: 175 EWAVDK----DLYSWNTMIAAYVGSGNMSQAKELFDEMQEQ----DVVSWSTIIAGYVQV 226
+K D+++++++I+ G S A L +M E+ +VV+++++I + +
Sbjct: 264 TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKE 323
Query: 227 GCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLL 286
G +EA F M+Q PN T+ S + LD+ + I + + + +
Sbjct: 324 GKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTY 383
Query: 287 ASIIDMYAKCGEIESASRVFWEHNAKRKVW---PWNAMIGGFAMHGKPSEAIKVFQKMKV 343
++I+ + K ++ +F + + + V + +I GF A VF++M
Sbjct: 384 NTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVS 443
Query: 344 ENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDY----GIIPEIEHYGCMVDLLSRA 399
+ V PN +T+ LL+ + + GKL ++V +Y + P+I Y M + + +A
Sbjct: 444 DGVHPNIMTYNTLLDG-----LCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKA 498
Query: 400 GLLKEAEDMISSMPM---APDVAIWGAVLNACRIYKDMERGYRIGRIIKEMDP 449
G +++ D+ S+ + PDV + +++ E Y + +KE P
Sbjct: 499 GKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGP 551
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 144/330 (43%), Gaps = 55/330 (16%)
Query: 145 VGLDSNVFVVNALIGMYGKWGLVEYGR----KVFEWAVDKDLYSWNTMIAAYVGSGNMSQ 200
+G+ N++ N +I + + + K+ + + + N+++ + +S+
Sbjct: 94 LGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISE 153
Query: 201 AKELFDEMQEQ----DVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALA 256
A L D+M E D V+++T++ G Q EA+ RM+ G +P+ T+ + +
Sbjct: 154 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 213
Query: 257 ACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEHNAK---- 312
D + + + +G+I+ + + +++ID K ++ A +F E + K
Sbjct: 214 GLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRP 273
Query: 313 ------------------------------RKVWP----WNAMIGGFAMHGKPSEAIKVF 338
RK+ P +N++I FA GK EA K+F
Sbjct: 274 DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 333
Query: 339 QKMKVENVSPNKVTFVALLNA-CSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLS 397
+M ++ PN VT+ +L+N C H + +E + F LMVS +P++ Y +++
Sbjct: 334 DEMIQRSIDPNIVTYNSLINGFCMHDRL-DEAQQIFTLMVSK-DCLPDVVTYNTLIN--- 388
Query: 398 RAGLLKEAEDMISSMPMAPDVAIWGAVLNA 427
G K A+ ++ M + D++ G V N
Sbjct: 389 --GFCK-AKKVVDGMELFRDMSRRGLVGNT 415
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 177/393 (45%), Gaps = 47/393 (11%)
Query: 50 VSANKFLKLVADAS-LSYAHKLFDQIPQ----PDLFIYNTMIKAHSLSPSSCNDSLM--V 102
V+ N L+ + D+ L A ++ D++ Q PD+ Y +I+A +C DS +
Sbjct: 205 VTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEA------TCRDSGVGHA 258
Query: 103 FRLLT--RDSGLSPNRYSF-VFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIG 159
+LL RD G +P+ ++ V G C G + E + + G NV N ++
Sbjct: 259 MKLLDEMRDRGCTPDVVTYNVLVNGICKEG-RLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 160 MY---GKWG-----LVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQ 211
G+W L + RK F +V ++N +I G + +A ++ ++M +
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSV----VTFNILINFLCRKGLLGRAIDILEKMPQH 373
Query: 212 ----DVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAA-CSNLVALDQ 266
+ +S++ ++ G+ + A+++ RM+ G P+ T+ + L A C + D
Sbjct: 374 GCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDA 433
Query: 267 GKWIHSFIGRG----EIKMNERLLASIIDMYAKCGEIESASRVFWEHNAKR---KVWPWN 319
+ ++ +G I N ++ID AK G+ A ++ E AK ++
Sbjct: 434 VEILNQLSSKGCSPVLITYN-----TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYS 488
Query: 320 AMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSD 379
+++GG + GK EAIK F + + + PN VTF +++ + + M+ +
Sbjct: 489 SLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMI-N 547
Query: 380 YGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSM 412
G P Y +++ L+ G+ KEA ++++ +
Sbjct: 548 RGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 124/314 (39%), Gaps = 43/314 (13%)
Query: 132 VQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEW----AVDKDLYSWNT 187
++EG + + V G ++ LI + + G K+ E D+ ++N
Sbjct: 118 LEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNV 177
Query: 188 MIAAYVGSGNMSQAKELFDEMQ-EQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKP 246
MI+ Y +G ++ A + D M DVV+++TI+ G +A++ RMLQ P
Sbjct: 178 MISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYP 237
Query: 247 NEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVF 306
+ T+ + A D G +G ++E
Sbjct: 238 DVITYTILIEA----TCRDSG------VGHAMKLLDE----------------------M 265
Query: 307 WEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTF-VALLNACSHGYM 365
+ V +N ++ G G+ EAIK M PN +T + L + CS G
Sbjct: 266 RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRW 325
Query: 366 VEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPM---APDVAIWG 422
++ KL ++ G P + + +++ L R GLL A D++ MP P+ +
Sbjct: 326 MDAEKLLADMLRK--GFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYN 383
Query: 423 AVLNACRIYKDMER 436
+L+ K M+R
Sbjct: 384 PLLHGFCKEKKMDR 397
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/385 (20%), Positives = 167/385 (43%), Gaps = 33/385 (8%)
Query: 5 CSTLTKPFHSDHCCRLASLVDTCKSIQQIKQTHAQLVTTALISHHVSANKFLKLVADASL 64
C+TL + F CRL K ++ ++ + A +I+++V + + K +
Sbjct: 140 CTTLIRGF-----CRLGKTRKAAKILEILEGSGA---VPDVITYNVMISGYCKA---GEI 188
Query: 65 SYAHKLFDQIP-QPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTF 123
+ A + D++ PD+ YNT++++ S ++ R+L RD P+ ++
Sbjct: 189 NNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDC--YPDVITYTILI 246
Query: 124 GACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFE----WAVD 179
A V ++ G +V N L+ K G ++ K
Sbjct: 247 EATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQ 306
Query: 180 KDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQ----DVVSWSTIIAGYVQVGCFMEALDF 235
++ + N ++ + +G A++L +M + VV+++ +I + G A+D
Sbjct: 307 PNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDI 366
Query: 236 FHRMLQVGPKPNEYTFVSALAACSNLVALDQG-KWIHSFIGRG---EIKMNERLLASIID 291
+M Q G +PN ++ L +D+ +++ + RG +I +L ++
Sbjct: 367 LEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTAL-- 424
Query: 292 MYAKCGEIESASRVFWEHNAK---RKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSP 348
K G++E A + + ++K + +N +I G A GK +AIK+ +M+ +++ P
Sbjct: 425 --CKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKP 482
Query: 349 NKVTFVALLNACSHGYMVEEGKLYF 373
+ +T+ +L+ S V+E +F
Sbjct: 483 DTITYSSLVGGLSREGKVDEAIKFF 507
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 154/363 (42%), Gaps = 51/363 (14%)
Query: 45 LISHHVSANKFLKL-VADASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVF 103
L+++ V N K D + + +K+ +P + IYNT+I +D+L +F
Sbjct: 221 LVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC-KYKHMDDALNLF 279
Query: 104 RLLTRDSGLSPNRYSF-------------------------------VFTFGACGNGLSV 132
+ + G+ PN ++ VFTF A + V
Sbjct: 280 KEM-ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF-V 337
Query: 133 QEG-----EQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFEWAVDK----DLY 183
+EG E++ VK +D ++ ++LI + ++ +++FE+ V K D+
Sbjct: 338 KEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVV 397
Query: 184 SWNTMIAAYVGSGNMSQAKELFDEMQEQ----DVVSWSTIIAGYVQVGCFMEALDFFHRM 239
++NT+I + + + E+F EM ++ + V+++ +I G Q G A + F M
Sbjct: 398 TYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM 457
Query: 240 LQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEI 299
+ G PN T+ + L L++ + ++ R +++ +I+ K G++
Sbjct: 458 VSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 517
Query: 300 ESASRVFWE---HNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVAL 356
E +F K V +N MI GF G EA +F++MK + PN + L
Sbjct: 518 EDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTL 577
Query: 357 LNA 359
+ A
Sbjct: 578 IRA 580
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/414 (20%), Positives = 173/414 (41%), Gaps = 34/414 (8%)
Query: 55 FLKLVADASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTR--DSGL 112
FL A +++ ++ + QPDL Y ++ D+ + F LL + L
Sbjct: 197 FLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKR----GDTDLAFNLLNKMEQGKL 252
Query: 113 SPNRYSFVFTFGACGNGLS----VQEGEQVRSHAVKVGLDSNVFVVNALIGM---YGKWG 165
P V + +GL + + + G+ NV ++LI YG+W
Sbjct: 253 EPG----VLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWS 308
Query: 166 -LVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDV----VSWSTII 220
+ E ++ D+++++ +I A+V G + +A++L+DEM ++ + V++S++I
Sbjct: 309 DASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLI 368
Query: 221 AGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIK 280
G+ EA F M+ P+ T+ + + +++G + + + +
Sbjct: 369 NGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 428
Query: 281 MNERLLASIIDMYAKCGEIESASRVFWE---HNAKRKVWPWNAMIGGFAMHGKPSEAIKV 337
N +I + G+ + A +F E + +N ++ G +GK +A+ V
Sbjct: 429 GNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVV 488
Query: 338 FQKMKVENVSPNKVTFVALLNACSHGYMVEEG-KLYFRLMVSDYGIIPEIEHYGCMVDLL 396
F+ ++ + P T+ ++ VE+G L+ L + G+ P++ Y M+
Sbjct: 489 FEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK--GVKPDVVAYNTMISGF 546
Query: 397 SRAGLLKEAEDMISSMP---MAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEM 447
R G +EA+ + M P+ + ++ A D E +IKEM
Sbjct: 547 CRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS---AELIKEM 597
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 157/348 (45%), Gaps = 25/348 (7%)
Query: 135 GEQVRSHAVKVGLDSNVFVVNALIGMYGK-----WGLVEYGRKVFEWAVDKDLYSWNTMI 189
GEQ+++ +G+ N + + LI + + L G K+ + + ++ + ++++
Sbjct: 104 GEQMQN----LGIPHNHYTYSILINCFCRRSQLPLALAVLG-KMMKLGYEPNIVTLSSLL 158
Query: 190 AAYVGSGNMSQAKELFDEM----QEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPK 245
Y S +S+A L D+M + + V+++T+I G EA+ RM+ G +
Sbjct: 159 NGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQ 218
Query: 246 PNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRV 305
P+ T+ + D + + + +G+++ + +IID K ++ A +
Sbjct: 219 PDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL 278
Query: 306 FWEHNAK---RKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNA-CS 361
F E K V ++++I +G+ S+A ++ M ++P+ TF AL++A
Sbjct: 279 FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 338
Query: 362 HGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMA---PDV 418
G +VE KLY ++ I P I Y +++ L EA+ M M PDV
Sbjct: 339 EGKLVEAEKLYDEMV--KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDV 396
Query: 419 AIWGAVLNACRIYKDMERGYRIGRIIKE--MDPNHVGCHVLLGNIYSS 464
+ ++ YK +E G + R + + + N V ++L+ ++ +
Sbjct: 397 VTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 444
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/377 (18%), Positives = 156/377 (41%), Gaps = 16/377 (4%)
Query: 48 HHVSANKFLKLVADASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLT 107
+S N +L D +++ ++ P P + ++ ++ A ++ + D ++
Sbjct: 50 EKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSA--IAKMNKFDVVISLGEQM 107
Query: 108 RDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLV 167
++ G+ N Y++ + V +K+G + N+ +++L+ Y +
Sbjct: 108 QNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRI 167
Query: 168 EYG----RKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQ----EQDVVSWSTI 219
++F + ++NT+I S+A L D M + D+V++ +
Sbjct: 168 SEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVV 227
Query: 220 IAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEI 279
+ G + G A + ++M Q +P + + + +D + + I
Sbjct: 228 VNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI 287
Query: 280 KMNERLLASIIDMYAKCGEIESASRVF---WEHNAKRKVWPWNAMIGGFAMHGKPSEAIK 336
+ N +S+I G ASR+ E V+ ++A+I F GK EA K
Sbjct: 288 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK 347
Query: 337 VFQKMKVENVSPNKVTFVALLNA-CSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDL 395
++ +M ++ P+ VT+ +L+N C H + +E K F MVS + P++ Y ++
Sbjct: 348 LYDEMVKRSIDPSIVTYSSLINGFCMHDRL-DEAKQMFEFMVSKH-CFPDVVTYNTLIKG 405
Query: 396 LSRAGLLKEAEDMISSM 412
+ ++E ++ M
Sbjct: 406 FCKYKRVEEGMEVFREM 422
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 179/418 (42%), Gaps = 64/418 (15%)
Query: 46 ISHHVSANKFLKLV-----ADASLSYAHKLFDQIPQPDLFIYNTMIKAH------SLSPS 94
I+H NK L DA+ S+ + + +P++ YN M+ AH L+ S
Sbjct: 446 IAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARS 505
Query: 95 SCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVV 154
++ L + GL PN FT+ +G + EQ + V ++++ F
Sbjct: 506 IFSEML--------EKGLEPNN----FTYSILIDGFFKNKDEQ-NAWDVINQMNASNFEA 552
Query: 155 NALIGMYGKWGLVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQ--- 211
N +I +NT+I G S+AKE+ + ++
Sbjct: 553 NEVI--------------------------YNTIINGLCKVGQTSKAKEMLQNLIKEKRY 586
Query: 212 --DVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKW 269
S+++II G+V+VG A++ + M + G PN TF S + +D
Sbjct: 587 SMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALE 646
Query: 270 IHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFWEH---NAKRKVWPWNAMIGGFA 326
+ + E+K++ ++ID + K ++++A +F E V +N++I GF
Sbjct: 647 MTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFR 706
Query: 327 MHGKPSEAIKVFQKMKVENVSPNKVTFVALLNA-CSHGYMVEEGKLYFRLMVSDYGIIPE 385
GK AI +++KM + +S + T+ +++ G + LY L+ D GI+P+
Sbjct: 707 NLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELL--DLGIVPD 764
Query: 386 IEHYGCMVDLLSRAGLLKEAEDMISSMP---MAPDVAIWGAVLNACRIYKDMERGYRI 440
+ +V+ LS+ G +A M+ M + P+V ++ V+ ++ +R+
Sbjct: 765 EILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRL 822
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 130/285 (45%), Gaps = 14/285 (4%)
Query: 181 DLYSWNTMIAAYVGSGNMSQAKELFDEMQ----EQDVVSWSTIIAGYVQVGCFMEALDFF 236
DL ++ +I G A L ++M+ E DVV ++TII G + +A D F
Sbjct: 214 DLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLF 273
Query: 237 HRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKC 296
++M G KP+ +T+ ++ N + S + I + ++ID + K
Sbjct: 274 NKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKE 333
Query: 297 GEIESASRVFWEHNAKRKVWP----WNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVT 352
G++ A +++ E + +P +N +I GF + + E ++VF++M + N VT
Sbjct: 334 GKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 393
Query: 353 FVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSM 412
+ L++ + ++ F+ MVSD G+ P+I Y ++D L G ++ A + M
Sbjct: 394 YTTLIHGFFQARDCDNAQMVFKQMVSD-GVHPDIMTYNILLDGLCNNGNVETALVVFEYM 452
Query: 413 ---PMAPDVAIWGAVLNACRIYKDMERGYRI--GRIIKEMDPNHV 452
M D+ + ++ A +E G+ + +K + PN V
Sbjct: 453 QKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVV 497
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 127/296 (42%), Gaps = 16/296 (5%)
Query: 146 GLDSNVFVVNALIGM---YGKWG-LVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQA 201
G+ +VF N LI YG+W + E ++ DL +N +I A+V G + +A
Sbjct: 280 GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEA 339
Query: 202 KELFDEMQEQ-----DVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALA 256
++L+DEM + DVV+++T+I G+ + E ++ F M Q G N T+ + +
Sbjct: 340 EKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIH 399
Query: 257 ACSNLVALDQGKWIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVF---WEHNAKR 313
D + + + + + ++D G +E+A VF + + K
Sbjct: 400 GFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKL 459
Query: 314 KVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYF 373
+ + MI GK + +F + ++ V PN VT+ +++ + EE F
Sbjct: 460 DIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 519
Query: 374 RLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSM---PMAPDVAIWGAVLN 426
M D G +P Y ++ R G + ++I M A D + +G V N
Sbjct: 520 VEMKED-GPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTN 574
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 15/213 (7%)
Query: 58 LVADASLSYAHKLFDQIPQ-----PDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGL 112
V + L A KL+D++ + PD+ YNT+IK + + VFR +++ GL
Sbjct: 330 FVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFC-KYKRVEEGMEVFREMSQ-RGL 387
Query: 113 SPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRK 172
N ++ + V V G+ ++ N L+ G VE
Sbjct: 388 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALV 447
Query: 173 VFEWAVDKDL----YSWNTMIAAYVGSGNMSQAKELFDEMQ----EQDVVSWSTIIAGYV 224
VFE+ +D+ ++ TMI A +G + +LF + + +VV+++T+++G+
Sbjct: 448 VFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 507
Query: 225 QVGCFMEALDFFHRMLQVGPKPNEYTFVSALAA 257
+ G EA F M + GP PN T+ + + A
Sbjct: 508 RKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 135/307 (43%), Gaps = 23/307 (7%)
Query: 60 ADASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSF 119
D +L +++ PD+ YN++I S + + MV + R+ + P+ ++F
Sbjct: 202 VDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKRE--IYPDVFTF 259
Query: 120 VFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGR-----KVF 174
AC V E E+ ++ LD ++ + LI +GL Y R ++F
Sbjct: 260 NALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLI-----YGLCMYSRLDEAEEMF 314
Query: 175 EWAVDK----DLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDVV----SWSTIIAGYVQV 226
+ V K D+ +++ +I Y S + +LF EM ++ VV +++ +I GY +
Sbjct: 315 GFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRA 374
Query: 227 GCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLL 286
G A + F RM+ G PN T+ L + +++ I + + + + +
Sbjct: 375 GKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTY 434
Query: 287 ASIIDMYAKCGEIESASRVFWEHNAK---RKVWPWNAMIGGFAMHGKPSEAIKVFQKMKV 343
II K GE+ A ++ N + +W + M+ G G EA +F+KMK
Sbjct: 435 NIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKE 494
Query: 344 ENVSPNK 350
+ + PN+
Sbjct: 495 DGILPNE 501
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 144/325 (44%), Gaps = 21/325 (6%)
Query: 120 VFTFGACGNGLS----VQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVFE 175
+ TFG+ NG V + + V +G NV + N +I K V+ +
Sbjct: 151 IVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLN 210
Query: 176 W----AVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQ----DVVSWSTIIAGYVQVG 227
+ D+ ++N++I+ SG S A + M ++ DV +++ +I V+ G
Sbjct: 211 RMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEG 270
Query: 228 CFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLA 287
EA +F+ M++ P+ T+ + LD+ + + F+ + +
Sbjct: 271 RVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYS 330
Query: 288 SIIDMYAKCGEIESASRVFWEHNAK---RKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVE 344
+I+ Y K ++E ++F E + + R + +I G+ GK + A ++F++M
Sbjct: 331 ILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFC 390
Query: 345 NVSPNKVTFVALLNA-CSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLK 403
V PN +T+ LL+ C +G + E L + G+ +I Y ++ + +AG +
Sbjct: 391 GVHPNIITYNVLLHGLCDNGKI--EKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVA 448
Query: 404 EAEDMISSMP---MAPDVAIWGAVL 425
+A D+ S+ + PD+ + ++
Sbjct: 449 DAWDIYCSLNCQGLMPDIWTYTTMM 473
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/432 (20%), Positives = 171/432 (39%), Gaps = 40/432 (9%)
Query: 12 FHSDHCCRLASLVDTCKSIQQIKQTHAQLVTTAL--------ISHHV-SANKFLKLVADA 62
FH C L S+ D + + I + V L I H++ + N L
Sbjct: 70 FHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRC 129
Query: 63 S-----LSYAHKLFDQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRY 117
S LS+ K+ +P + + +++ D+L +F + G PN
Sbjct: 130 SQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFC-RGDRVYDALYMFDQMV-GMGYKPNVV 187
Query: 118 SFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGR------ 171
+ V + + K G+ +V N+LI GL GR
Sbjct: 188 IYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLIS-----GLCSSGRWSDATR 242
Query: 172 ---KVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEM----QEQDVVSWSTIIAGYV 224
+ + + D++++N +I A V G +S+A+E ++EM + D+V++S +I G
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLC 302
Query: 225 QVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNER 284
EA + F M+ G P+ T+ + ++ G + + + + N
Sbjct: 303 MYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTV 362
Query: 285 LLASIIDMYAKCGEIESASRVFWEH---NAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKM 341
+I Y + G++ A +F + +N ++ G +GK +A+ + M
Sbjct: 363 TYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADM 422
Query: 342 KVENVSPNKVTF-VALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAG 400
+ + + VT+ + + C G + + +Y L G++P+I Y M+ L + G
Sbjct: 423 QKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQ--GLMPDIWTYTTMMLGLYKKG 480
Query: 401 LLKEAEDMISSM 412
L +EA+ + M
Sbjct: 481 LRREADALFRKM 492
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 88/204 (43%), Gaps = 7/204 (3%)
Query: 231 EALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGEIKMNERLLASII 290
++LD F M+Q P P+ F L+A S + D ++ + I N ++
Sbjct: 64 DSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILL 123
Query: 291 DMYAKCGEIESASRVFWEH---NAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVS 347
+ + +C ++ A + + + + +++ GF + +A+ +F +M
Sbjct: 124 NCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYK 183
Query: 348 PNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSRAGLLKEAED 407
PN V + +++ V+ M D GI P++ Y ++ L +G +A
Sbjct: 184 PNVVIYNTIIDGLCKSKQVDNALDLLNRMEKD-GIGPDVVTYNSLISGLCSSGRWSDATR 242
Query: 408 MISSMP---MAPDVAIWGAVLNAC 428
M+S M + PDV + A+++AC
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDAC 266
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 145/311 (46%), Gaps = 22/311 (7%)
Query: 64 LSYAHKLF---DQIPQPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFV 120
LS A ++F ++ + + YN MIKA+ +S SC + +F + G++P++ ++
Sbjct: 487 LSEAERVFICCQEVNKRTVIEYNVMIKAYGIS-KSCEKACELFESMM-SYGVTPDKCTYN 544
Query: 121 FTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYGRKVF----EW 176
+ +G + G S+ A+I + K G + +V+ E+
Sbjct: 545 TLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEY 604
Query: 177 AVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQDV----VSWSTIIAGYVQVGCFMEA 232
++ D+ + +I A+ +GN+ QA + M+E + V ++++I Y +VG EA
Sbjct: 605 NIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEA 664
Query: 233 LDFFHRMLQVGPK---PNEYTFVSALAACSNLVALDQGKWI-HSFIGRGEIKMNERLLAS 288
+ ++LQ K P+ YT + S + + + I S RGE NE A
Sbjct: 665 EAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGE--ANEFTFAM 722
Query: 289 IIDMYAKCGEIESASRV---FWEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVEN 345
++ MY K G E A+++ E +N+++G FA+ G+ EA++ F++M
Sbjct: 723 MLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSG 782
Query: 346 VSPNKVTFVAL 356
+ P+ TF +L
Sbjct: 783 IQPDDSTFKSL 793
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 99/475 (20%), Positives = 212/475 (44%), Gaps = 31/475 (6%)
Query: 22 SLVDTCKSIQQIKQ---THAQLVTTALISHHVSANKFLKLVAD-ASLSYAHKLFDQIP-- 75
+++DT QIK+ T +++ ++ V+ N + + + L L +
Sbjct: 303 TMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLH 362
Query: 76 -QPDLFIYNTMIKAHSLSPSSCNDSLMVFRLLTRDSGLSPNRYSFVFTFGACGNGLSVQE 134
PD YN +I H+ + + + F+ + +D GL P+ S+ A V+E
Sbjct: 363 CAPDTRTYNILISLHTKN-NDIERAGAYFKEM-KDDGLKPDPVSYRTLLYAFSIRHMVEE 420
Query: 135 GEQVRSHAVKVGLDSNVFVVNALIGMYGKWGLVEYG---RKVFEWAVDKDLYSWNTMIAA 191
E + + ++ + + +AL MY + ++E K F A + ++ I A
Sbjct: 421 AEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDA 480
Query: 192 YVGSGNMSQAKELF---DEMQEQDVVSWSTIIAGYVQVGCFMEALDFFHRMLQVGPKPNE 248
Y G +S+A+ +F E+ ++ V+ ++ +I Y +A + F M+ G P++
Sbjct: 481 YGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDK 540
Query: 249 YTFVSALAACSNLVALDQGK-WIHSFIGRGEIKMNERLLASIIDMYAKCGEIESASRVFW 307
T+ + + ++ +G+ ++ G + + ++I + K G++ A V+
Sbjct: 541 CTYNTLVQILASADMPHKGRCYLEKMRETGYVS-DCIPYCAVISSFVKLGQLNMAEEVYK 599
Query: 308 E---HNAKRKVWPWNAMIGGFAMHGKPSEAIKVFQKMKVENVSPNKVTFVALLNACSH-G 363
E +N + V + +I FA G +A+ + MK + N V + +L+ + G
Sbjct: 600 EMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVG 659
Query: 364 YMVEEGKLYFRLMVS-DYGIIPEIEHYGCMVDLLSRAGLLKEAEDMISSMPMAPDVAIWG 422
Y+ E +Y +L+ S + P++ CM++L S ++++AE + SM + +
Sbjct: 660 YLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFT 719
Query: 423 AVLNACRIYKD--MERGYRIGRIIKEM----DPNHVGCHVLLGNIYSSSGRWNDA 471
+ C K+ E +I + ++EM DP + + +LG +++ GR+ +A
Sbjct: 720 FAMMLCMYKKNGRFEEATQIAKQMREMKILTDP--LSYNSVLG-LFALDGRFKEA 771
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/383 (21%), Positives = 161/383 (42%), Gaps = 17/383 (4%)
Query: 109 DSGLSPNRYSFVFTFGACGNGLSVQEGEQVRSHAVKVGLDSNVFVVNALIGMYG---KWG 165
DS + + Y++ G ++E + ++ G+ N +I +YG + G
Sbjct: 291 DSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLG 350
Query: 166 LVEYGRKVFEWAVDKDLYSWNTMIAAYVGSGNMSQAKELFDEMQEQ----DVVSWSTIIA 221
V K + D ++N +I+ + + ++ +A F EM++ D VS+ T++
Sbjct: 351 EVTSLMKTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLY 410
Query: 222 GYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQG-KWIHSFIGRGEIK 280
+ EA M + +EYT + L++ W F G
Sbjct: 411 AFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAG--N 468
Query: 281 MNERLLASIIDMYAKCGEIESASRVF--WEHNAKRKVWPWNAMIGGFAMHGKPSEAIKVF 338
M+ ++ ID Y + G + A RVF + KR V +N MI + + +A ++F
Sbjct: 469 MSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELF 528
Query: 339 QKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHYGCMVDLLSR 398
+ M V+P+K T+ L+ + M +G+ Y M + G + + Y ++ +
Sbjct: 529 ESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKM-RETGYVSDCIPYCAVISSFVK 587
Query: 399 AGLLKEAEDMISSM---PMAPDVAIWGAVLNACRIYKDMERGYRIGRIIKEMD-PNHVGC 454
G L AE++ M + PDV ++G ++NA ++++ +KE P +
Sbjct: 588 LGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVI 647
Query: 455 HVLLGNIYSSSGRWNDARMLREK 477
+ L +Y+ G ++A + K
Sbjct: 648 YNSLIKLYTKVGYLDEAEAIYRK 670
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 113/263 (42%), Gaps = 20/263 (7%)
Query: 168 EYGRKVFEWAVDKDLYS-----WNTMIAAYVGSGNMSQAKELFDEMQEQDV----VSWST 218
E ++FEW K Y +N M+ + + L+DEM + + ++ T
Sbjct: 168 ERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGT 227
Query: 219 IIAGYVQVGCFMEALDFFHRMLQVGPKPNEYTFVSALAACSNLVALDQGKWIHSFIGRGE 278
+I Y + G + AL + +M ++G +P+E T L + + E
Sbjct: 228 LIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDE 287
Query: 279 IKMNERLLAS------IIDMYAKCGEIESASRVF---WEHNAKRKVWPWNAMIGGFAMHG 329
K + + S +ID Y K G+I+ AS F E +N MI + +G
Sbjct: 288 NKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNG 347
Query: 330 KPSEAIKVFQKMKVENVSPNKVTFVALLNACSHGYMVEEGKLYFRLMVSDYGIIPEIEHY 389
+ E + + MK+ + +P+ T+ L++ + +E YF+ M D G+ P+ Y
Sbjct: 348 QLGEVTSLMKTMKL-HCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDD-GLKPDPVSY 405
Query: 390 GCMVDLLSRAGLLKEAEDMISSM 412
++ S +++EAE +I+ M
Sbjct: 406 RTLLYAFSIRHMVEEAEGLIAEM 428