Miyakogusa Predicted Gene

Lj2g3v0461500.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0461500.1 Non Chatacterized Hit- tr|I1MQ40|I1MQ40_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.13094
PE,89.18,0,HMG-CoA-S_euk: hydroxymethylglutaryl-CoA
synthase,Hydroxymethylglutaryl-CoA synthase, eukaryotic;
SU,CUFF.34600.1
         (459 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G11820.2 | Symbols: MVA1, FKP1 | hydroxymethylglutaryl-CoA sy...   736   0.0  
AT4G11820.1 | Symbols: MVA1, HMGS, EMB2778, FKP1 | hydroxymethyl...   637   0.0  

>AT4G11820.2 | Symbols: MVA1, FKP1 | hydroxymethylglutaryl-CoA
           synthase / HMG-CoA synthase / 3-hydroxy-3-methylglutaryl
           coenzyme A synthase | chr4:7109124-7111901 REVERSE
           LENGTH=461
          Length = 461

 Score =  736 bits (1899), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/448 (77%), Positives = 387/448 (86%), Gaps = 2/448 (0%)

Query: 9   NVGILAIDIYFPPTCVQQGALEEHDGVSKGKYTIGLGQDCMAFCTDVEDVISMSLTVVTS 68
           NVGILA+DIYFPPTCVQQ ALE HDG SKGKYTIGLGQDC+AFCT++EDVISMS   VTS
Sbjct: 4   NVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQDCLAFCTELEDVISMSFNAVTS 63

Query: 69  LLEKYNVDSKQIGRLEVGSETVIDKSKSIKTFLMQVFEESGNADIEGVDSTNACYGGTAA 128
           L EKY +D  QIGRLEVGSETVIDKSKSIKTFLMQ+FE+ GN D+EGVDSTNACYGGTAA
Sbjct: 64  LFEKYKIDPNQIGRLEVGSETVIDKSKSIKTFLMQLFEKCGNTDVEGVDSTNACYGGTAA 123

Query: 129 LFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLIGPDAPIVFESKLRG 188
           L NCVNWVES+SWDGRYGLV+CTDSAVYAEGPARPTGGAAAIAMLIGPDAPIVFESKLR 
Sbjct: 124 LLNCVNWVESNSWDGRYGLVICTDSAVYAEGPARPTGGAAAIAMLIGPDAPIVFESKLRA 183

Query: 189 SHMSHVYDFYKPNLASEYPVVDGMLSQTCYLMALDSCYRLLCEKFEKLEGRPFSISDSDY 248
           SHM+HVYDFYKPNLASEYPVVDG LSQTCYLMALDSCY+ LC KFEK+EG+ FSI+D+DY
Sbjct: 184 SHMAHVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNKFEKIEGKEFSINDADY 243

Query: 249 FVFHSPYNKLVQKSFGRLYFNDFQRNPSFVDEVSRNALAPFASLSGDESYRSRDLEKANQ 308
            VFHSPYNKLVQKSF RL +NDF RN S +DE ++    P++SL+ DESY+SRDLEK +Q
Sbjct: 244 IVFHSPYNKLVQKSFARLLYNDFLRNASSIDEAAKEKFTPYSSLTLDESYQSRDLEKVSQ 303

Query: 309 QAAKHVYDAKVQPGTLIPKQVGNMYTASLYSAFASLLHNKHDSLVGKRVVMFSYGSGLTA 368
           Q AK  YDAKVQP TLIPK+VGNMYTASLY+AFASL+H KH+ L GKRVVMFSYGSG TA
Sbjct: 304 QIAKPFYDAKVQPTTLIPKEVGNMYTASLYAAFASLIHKKHNDLAGKRVVMFSYGSGSTA 363

Query: 369 TMFSFRLQEGQQPFNLSNIVKLMNVSDKLKQRIEVTPEKFVETLKIMEQRYGAKDFVTSM 428
           TMFS RL + + PF++SNI  +M+V  KLK R E  PEKFVET+K+ME RYGAKDFVT+ 
Sbjct: 364 TMFSLRLNDNKPPFSISNIASVMDVGGKLKARHEYAPEKFVETMKLMEHRYGAKDFVTTK 423

Query: 429 D--CSYLHPGTFYLTKVDSMYRRFYSKK 454
           +     L PGT+YL +VDS+YRRFY KK
Sbjct: 424 EGIIDLLAPGTYYLKEVDSLYRRFYGKK 451


>AT4G11820.1 | Symbols: MVA1, HMGS, EMB2778, FKP1 |
           hydroxymethylglutaryl-CoA synthase / HMG-CoA synthase /
           3-hydroxy-3-methylglutaryl coenzyme A synthase |
           chr4:7109124-7111213 REVERSE LENGTH=406
          Length = 406

 Score =  637 bits (1642), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 300/396 (75%), Positives = 338/396 (85%), Gaps = 2/396 (0%)

Query: 61  MSLTVVTSLLEKYNVDSKQIGRLEVGSETVIDKSKSIKTFLMQVFEESGNADIEGVDSTN 120
           MS   VTSL EKY +D  QIGRLEVGSETVIDKSKSIKTFLMQ+FE+ GN D+EGVDSTN
Sbjct: 1   MSFNAVTSLFEKYKIDPNQIGRLEVGSETVIDKSKSIKTFLMQLFEKCGNTDVEGVDSTN 60

Query: 121 ACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLIGPDAPI 180
           ACYGGTAAL NCVNWVES+SWDGRYGLV+CTDSAVYAEGPARPTGGAAAIAMLIGPDAPI
Sbjct: 61  ACYGGTAALLNCVNWVESNSWDGRYGLVICTDSAVYAEGPARPTGGAAAIAMLIGPDAPI 120

Query: 181 VFESKLRGSHMSHVYDFYKPNLASEYPVVDGMLSQTCYLMALDSCYRLLCEKFEKLEGRP 240
           VFESKLR SHM+HVYDFYKPNLASEYPVVDG LSQTCYLMALDSCY+ LC KFEK+EG+ 
Sbjct: 121 VFESKLRASHMAHVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNKFEKIEGKE 180

Query: 241 FSISDSDYFVFHSPYNKLVQKSFGRLYFNDFQRNPSFVDEVSRNALAPFASLSGDESYRS 300
           FSI+D+DY VFHSPYNKLVQKSF RL +NDF RN S +DE ++    P++SL+ DESY+S
Sbjct: 181 FSINDADYIVFHSPYNKLVQKSFARLLYNDFLRNASSIDEAAKEKFTPYSSLTLDESYQS 240

Query: 301 RDLEKANQQAAKHVYDAKVQPGTLIPKQVGNMYTASLYSAFASLLHNKHDSLVGKRVVMF 360
           RDLEK +QQ AK  YDAKVQP TLIPK+VGNMYTASLY+AFASL+H KH+ L GKRVVMF
Sbjct: 241 RDLEKVSQQIAKPFYDAKVQPTTLIPKEVGNMYTASLYAAFASLIHKKHNDLAGKRVVMF 300

Query: 361 SYGSGLTATMFSFRLQEGQQPFNLSNIVKLMNVSDKLKQRIEVTPEKFVETLKIMEQRYG 420
           SYGSG TATMFS RL + + PF++SNI  +M+V  KLK R E  PEKFVET+K+ME RYG
Sbjct: 301 SYGSGSTATMFSLRLNDNKPPFSISNIASVMDVGGKLKARHEYAPEKFVETMKLMEHRYG 360

Query: 421 AKDFVTSMD--CSYLHPGTFYLTKVDSMYRRFYSKK 454
           AKDFVT+ +     L PGT+YL +VDS+YRRFY KK
Sbjct: 361 AKDFVTTKEGIIDLLAPGTYYLKEVDSLYRRFYGKK 396