Miyakogusa Predicted Gene

Lj2g3v0450440.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0450440.1 Non Chatacterized Hit- tr|B7FI27|B7FI27_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,87.72,0,seg,NULL; SUBFAMILY NOT NAMED,NULL;
PER1-RELATED,Per1-like; Per1,Per1-like,CUFF.34598.1
         (342 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G16560.3 | Symbols:  | Per1-like family protein | chr1:566894...   474   e-134
AT1G16560.2 | Symbols:  | Per1-like family protein | chr1:566894...   474   e-134
AT1G16560.1 | Symbols:  | Per1-like family protein | chr1:566894...   474   e-134
AT5G62130.1 | Symbols:  | Per1-like family protein | chr5:249506...   462   e-130
AT5G62130.2 | Symbols:  | Per1-like family protein | chr5:249506...   446   e-125
AT1G16560.4 | Symbols:  | Per1-like family protein | chr1:566923...   334   5e-92

>AT1G16560.3 | Symbols:  | Per1-like family protein |
           chr1:5668945-5670343 FORWARD LENGTH=342
          Length = 342

 Score =  474 bits (1220), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 215/316 (68%), Positives = 255/316 (80%), Gaps = 4/316 (1%)

Query: 21  TASDGDADPLYKACVEQCEKTGCVGDRCFQHCKFSSDGKPVDGPWYMHEPLYLRWKQWDC 80
            AS GDADP Y+ CV +CE +GCVG  CF  C  SSDG    GPWY+ EPLYL+WK+W C
Sbjct: 21  NASAGDADPDYRTCVSECEISGCVGQLCFPQCNSSSDG----GPWYIQEPLYLQWKKWGC 76

Query: 81  RTDCRYHCMLVREEERTKLGDKPVKYHGKWPFRRVYGIQEPVAVALSALNLAMQFHGWVS 140
           + DCRY CM+ RE ER  LG  PVKYHGKWPF+RV GIQEP +VA S LNLAM FHGW+S
Sbjct: 77  QGDCRYQCMVNRETERETLGQAPVKYHGKWPFKRVLGIQEPASVAFSVLNLAMHFHGWLS 136

Query: 141 FFILVYYKLPLMPDKKTYYEYTGLWHIYGILSMNSWLWSSVFHSRAVELTEKLNYSSAVG 200
           FFI++YYKLPL  D+  YYEY GLWHIYG+LSMNSW WS+VFHSR V+LTE+L+YSSAV 
Sbjct: 137 FFIMIYYKLPLKQDRTAYYEYVGLWHIYGLLSMNSWFWSAVFHSRDVDLTERLDYSSAVA 196

Query: 201 LLGFTLILAILRAFNVRDEATRVMVSAPLVAFVTTHIMYLNFYDLNYGLNMKVCMSMTVV 260
           +LGF+LILAILR F++R EA RVMVSAP++AFVTTHI+Y+NFY L+YG NM VC++M V 
Sbjct: 197 ILGFSLILAILRTFDIRVEAARVMVSAPILAFVTTHILYINFYKLDYGWNMIVCVAMGVS 256

Query: 261 QLLIWAIWAGVSSHPARWKLWTVVVGQALAMVMETYDFPPYMGYVDAHAVWNACCIPLTF 320
           QL +WA WA VSSHP+ WKLW VV+   LAM++E YDFPPY GY DAH++W+A  IPLT 
Sbjct: 257 QLFLWARWAAVSSHPSNWKLWVVVIAGGLAMLLEIYDFPPYEGYFDAHSIWHAATIPLTI 316

Query: 321 LWWSYIRDDAEFRTSA 336
           LWWS+IRDDAEFRTS+
Sbjct: 317 LWWSFIRDDAEFRTSS 332


>AT1G16560.2 | Symbols:  | Per1-like family protein |
           chr1:5668945-5670343 FORWARD LENGTH=342
          Length = 342

 Score =  474 bits (1220), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 215/316 (68%), Positives = 255/316 (80%), Gaps = 4/316 (1%)

Query: 21  TASDGDADPLYKACVEQCEKTGCVGDRCFQHCKFSSDGKPVDGPWYMHEPLYLRWKQWDC 80
            AS GDADP Y+ CV +CE +GCVG  CF  C  SSDG    GPWY+ EPLYL+WK+W C
Sbjct: 21  NASAGDADPDYRTCVSECEISGCVGQLCFPQCNSSSDG----GPWYIQEPLYLQWKKWGC 76

Query: 81  RTDCRYHCMLVREEERTKLGDKPVKYHGKWPFRRVYGIQEPVAVALSALNLAMQFHGWVS 140
           + DCRY CM+ RE ER  LG  PVKYHGKWPF+RV GIQEP +VA S LNLAM FHGW+S
Sbjct: 77  QGDCRYQCMVNRETERETLGQAPVKYHGKWPFKRVLGIQEPASVAFSVLNLAMHFHGWLS 136

Query: 141 FFILVYYKLPLMPDKKTYYEYTGLWHIYGILSMNSWLWSSVFHSRAVELTEKLNYSSAVG 200
           FFI++YYKLPL  D+  YYEY GLWHIYG+LSMNSW WS+VFHSR V+LTE+L+YSSAV 
Sbjct: 137 FFIMIYYKLPLKQDRTAYYEYVGLWHIYGLLSMNSWFWSAVFHSRDVDLTERLDYSSAVA 196

Query: 201 LLGFTLILAILRAFNVRDEATRVMVSAPLVAFVTTHIMYLNFYDLNYGLNMKVCMSMTVV 260
           +LGF+LILAILR F++R EA RVMVSAP++AFVTTHI+Y+NFY L+YG NM VC++M V 
Sbjct: 197 ILGFSLILAILRTFDIRVEAARVMVSAPILAFVTTHILYINFYKLDYGWNMIVCVAMGVS 256

Query: 261 QLLIWAIWAGVSSHPARWKLWTVVVGQALAMVMETYDFPPYMGYVDAHAVWNACCIPLTF 320
           QL +WA WA VSSHP+ WKLW VV+   LAM++E YDFPPY GY DAH++W+A  IPLT 
Sbjct: 257 QLFLWARWAAVSSHPSNWKLWVVVIAGGLAMLLEIYDFPPYEGYFDAHSIWHAATIPLTI 316

Query: 321 LWWSYIRDDAEFRTSA 336
           LWWS+IRDDAEFRTS+
Sbjct: 317 LWWSFIRDDAEFRTSS 332


>AT1G16560.1 | Symbols:  | Per1-like family protein |
           chr1:5668945-5670343 FORWARD LENGTH=342
          Length = 342

 Score =  474 bits (1220), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 215/316 (68%), Positives = 255/316 (80%), Gaps = 4/316 (1%)

Query: 21  TASDGDADPLYKACVEQCEKTGCVGDRCFQHCKFSSDGKPVDGPWYMHEPLYLRWKQWDC 80
            AS GDADP Y+ CV +CE +GCVG  CF  C  SSDG    GPWY+ EPLYL+WK+W C
Sbjct: 21  NASAGDADPDYRTCVSECEISGCVGQLCFPQCNSSSDG----GPWYIQEPLYLQWKKWGC 76

Query: 81  RTDCRYHCMLVREEERTKLGDKPVKYHGKWPFRRVYGIQEPVAVALSALNLAMQFHGWVS 140
           + DCRY CM+ RE ER  LG  PVKYHGKWPF+RV GIQEP +VA S LNLAM FHGW+S
Sbjct: 77  QGDCRYQCMVNRETERETLGQAPVKYHGKWPFKRVLGIQEPASVAFSVLNLAMHFHGWLS 136

Query: 141 FFILVYYKLPLMPDKKTYYEYTGLWHIYGILSMNSWLWSSVFHSRAVELTEKLNYSSAVG 200
           FFI++YYKLPL  D+  YYEY GLWHIYG+LSMNSW WS+VFHSR V+LTE+L+YSSAV 
Sbjct: 137 FFIMIYYKLPLKQDRTAYYEYVGLWHIYGLLSMNSWFWSAVFHSRDVDLTERLDYSSAVA 196

Query: 201 LLGFTLILAILRAFNVRDEATRVMVSAPLVAFVTTHIMYLNFYDLNYGLNMKVCMSMTVV 260
           +LGF+LILAILR F++R EA RVMVSAP++AFVTTHI+Y+NFY L+YG NM VC++M V 
Sbjct: 197 ILGFSLILAILRTFDIRVEAARVMVSAPILAFVTTHILYINFYKLDYGWNMIVCVAMGVS 256

Query: 261 QLLIWAIWAGVSSHPARWKLWTVVVGQALAMVMETYDFPPYMGYVDAHAVWNACCIPLTF 320
           QL +WA WA VSSHP+ WKLW VV+   LAM++E YDFPPY GY DAH++W+A  IPLT 
Sbjct: 257 QLFLWARWAAVSSHPSNWKLWVVVIAGGLAMLLEIYDFPPYEGYFDAHSIWHAATIPLTI 316

Query: 321 LWWSYIRDDAEFRTSA 336
           LWWS+IRDDAEFRTS+
Sbjct: 317 LWWSFIRDDAEFRTSS 332


>AT5G62130.1 | Symbols:  | Per1-like family protein |
           chr5:24950685-24952918 REVERSE LENGTH=343
          Length = 343

 Score =  462 bits (1188), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 200/321 (62%), Positives = 263/321 (81%)

Query: 22  ASDGDADPLYKACVEQCEKTGCVGDRCFQHCKFSSDGKPVDGPWYMHEPLYLRWKQWDCR 81
           AS+GD+D LYK+CV+QC+KTGCVGD CFQHCKFS+DGK +DGPWYM EPLYLRWKQWDC+
Sbjct: 23  ASEGDSDSLYKSCVDQCQKTGCVGDTCFQHCKFSADGKAIDGPWYMQEPLYLRWKQWDCQ 82

Query: 82  TDCRYHCMLVREEERTKLGDKPVKYHGKWPFRRVYGIQEPVAVALSALNLAMQFHGWVSF 141
           +DC+Y CM+ REEER + G++P KY GKWP + VYGIQEPV+VA SAL+LAMQF GWVS+
Sbjct: 83  SDCQYECMMTREEERKRNGERPTKYFGKWPLKHVYGIQEPVSVAFSALDLAMQFQGWVSY 142

Query: 142 FILVYYKLPLMPDKKTYYEYTGLWHIYGILSMNSWLWSSVFHSRAVELTEKLNYSSAVGL 201
           FILVYYKLPL P++KTYYEY G+ HIY I+ MNS  WSS+ HSR VELTE+L+YSSA  L
Sbjct: 143 FILVYYKLPLQPNRKTYYEYNGIVHIYAIIVMNSLFWSSICHSRDVELTERLDYSSATVL 202

Query: 202 LGFTLILAILRAFNVRDEATRVMVSAPLVAFVTTHIMYLNFYDLNYGLNMKVCMSMTVVQ 261
            GF+LILAILR+F+++D++ ++MV+AP++A V THI+YLNFY+L+ GL+ KV   +  ++
Sbjct: 203 AGFSLILAILRSFSIQDQSVKIMVTAPILAVVATHILYLNFYNLDEGLHWKVIFGIGGIE 262

Query: 262 LLIWAIWAGVSSHPARWKLWTVVVGQALAMVMETYDFPPYMGYVDAHAVWNACCIPLTFL 321
           L++W +WA ++SHP++WKL   ++   L + +  +DFPPY GY+DAHA+W    IPL++L
Sbjct: 263 LVVWGLWAALTSHPSKWKLRAFLISSILTLCLRMFDFPPYKGYIDAHALWRGAGIPLSYL 322

Query: 322 WWSYIRDDAEFRTSALLKKVK 342
           WWS++ DDA FRT+  LKK K
Sbjct: 323 WWSFVCDDAVFRTTVNLKKSK 343


>AT5G62130.2 | Symbols:  | Per1-like family protein |
           chr5:24950685-24952426 REVERSE LENGTH=345
          Length = 345

 Score =  446 bits (1146), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 192/311 (61%), Positives = 254/311 (81%)

Query: 32  KACVEQCEKTGCVGDRCFQHCKFSSDGKPVDGPWYMHEPLYLRWKQWDCRTDCRYHCMLV 91
           ++CV+QC+KTGCVGD CFQHCKFS+DGK +DGPWYM EPLYLRWKQWDC++DC+Y CM+ 
Sbjct: 35  RSCVDQCQKTGCVGDTCFQHCKFSADGKAIDGPWYMQEPLYLRWKQWDCQSDCQYECMMT 94

Query: 92  REEERTKLGDKPVKYHGKWPFRRVYGIQEPVAVALSALNLAMQFHGWVSFFILVYYKLPL 151
           REEER + G++P KY GKWP + VYGIQEPV+VA SAL+LAMQF GWVS+FILVYYKLPL
Sbjct: 95  REEERKRNGERPTKYFGKWPLKHVYGIQEPVSVAFSALDLAMQFQGWVSYFILVYYKLPL 154

Query: 152 MPDKKTYYEYTGLWHIYGILSMNSWLWSSVFHSRAVELTEKLNYSSAVGLLGFTLILAIL 211
            P++KTYYEY G+ HIY I+ MNS  WSS+ HSR VELTE+L+YSSA  L GF+LILAIL
Sbjct: 155 QPNRKTYYEYNGIVHIYAIIVMNSLFWSSICHSRDVELTERLDYSSATVLAGFSLILAIL 214

Query: 212 RAFNVRDEATRVMVSAPLVAFVTTHIMYLNFYDLNYGLNMKVCMSMTVVQLLIWAIWAGV 271
           R+F+++D++ ++MV+AP++A V THI+YLNFY+L+ GL+ KV   +  ++L++W +WA +
Sbjct: 215 RSFSIQDQSVKIMVTAPILAVVATHILYLNFYNLDEGLHWKVIFGIGGIELVVWGLWAAL 274

Query: 272 SSHPARWKLWTVVVGQALAMVMETYDFPPYMGYVDAHAVWNACCIPLTFLWWSYIRDDAE 331
           +SHP++WKL   ++   L + +  +DFPPY GY+DAHA+W    IPL++LWWS++ DDA 
Sbjct: 275 TSHPSKWKLRAFLISSILTLCLRMFDFPPYKGYIDAHALWRGAGIPLSYLWWSFVCDDAV 334

Query: 332 FRTSALLKKVK 342
           FRT+  LKK K
Sbjct: 335 FRTTVNLKKSK 345


>AT1G16560.4 | Symbols:  | Per1-like family protein |
           chr1:5669234-5670343 FORWARD LENGTH=287
          Length = 287

 Score =  334 bits (857), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 152/217 (70%), Positives = 183/217 (84%)

Query: 120 EPVAVALSALNLAMQFHGWVSFFILVYYKLPLMPDKKTYYEYTGLWHIYGILSMNSWLWS 179
           EP +VA S LNLAM FHGW+SFFI++YYKLPL  D+  YYEY GLWHIYG+LSMNSW WS
Sbjct: 61  EPASVAFSVLNLAMHFHGWLSFFIMIYYKLPLKQDRTAYYEYVGLWHIYGLLSMNSWFWS 120

Query: 180 SVFHSRAVELTEKLNYSSAVGLLGFTLILAILRAFNVRDEATRVMVSAPLVAFVTTHIMY 239
           +VFHSR V+LTE+L+YSSAV +LGF+LILAILR F++R EA RVMVSAP++AFVTTHI+Y
Sbjct: 121 AVFHSRDVDLTERLDYSSAVAILGFSLILAILRTFDIRVEAARVMVSAPILAFVTTHILY 180

Query: 240 LNFYDLNYGLNMKVCMSMTVVQLLIWAIWAGVSSHPARWKLWTVVVGQALAMVMETYDFP 299
           +NFY L+YG NM VC++M V QL +WA WA VSSHP+ WKLW VV+   LAM++E YDFP
Sbjct: 181 INFYKLDYGWNMIVCVAMGVSQLFLWARWAAVSSHPSNWKLWVVVIAGGLAMLLEIYDFP 240

Query: 300 PYMGYVDAHAVWNACCIPLTFLWWSYIRDDAEFRTSA 336
           PY GY DAH++W+A  IPLT LWWS+IRDDAEFRTS+
Sbjct: 241 PYEGYFDAHSIWHAATIPLTILWWSFIRDDAEFRTSS 277