Miyakogusa Predicted Gene

Lj2g3v0435490.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0435490.1 tr|G7IAQ3|G7IAQ3_MEDTR Dihydrodipicolinate
reductase OS=Medicago truncatula GN=MTR_1g101400 PE=4
SV=,91.06,0,dapB: dihydrodipicolinate reductase,Dihydrodipicolinate
reductase, bacterial; Glyceraldehyde-3-phosp,CUFF.34589.1
         (301 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G52100.1 | Symbols: crr1 | Dihydrodipicolinate reductase, bac...   449   e-126

>AT5G52100.1 | Symbols: crr1 | Dihydrodipicolinate reductase,
           bacterial/plant | chr5:21170203-21172107 FORWARD
           LENGTH=298
          Length = 298

 Score =  449 bits (1155), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 225/303 (74%), Positives = 262/303 (86%), Gaps = 7/303 (2%)

Query: 1   MSALSCQFHSINYLNSQNVKSRGKHFISCSA-QPMQSNIKVVINGAAKEIGRAAVEAVTK 59
           M+A++C F  +    S+++K     F SCSA QP Q+NIKV+INGAAKEIGRAAV AVTK
Sbjct: 1   MAAVNCHFFQL----SRHLKPSRPSF-SCSASQPSQNNIKVIINGAAKEIGRAAVVAVTK 55

Query: 60  ARGMEVAGAVDTYHVGEDIGKVCGMEEPLEIPILNDLIMVLGSISQSKETTVVVDFTDPS 119
           ARGME+AGAVD + VGEDIG +C MEEPLEIP+++DL MVLGSISQ KE  VV+DFTDPS
Sbjct: 56  ARGMELAGAVDNHFVGEDIGLLCDMEEPLEIPVVSDLTMVLGSISQGKEVGVVIDFTDPS 115

Query: 120 SVYDNVKQATAFGMKSVVYVPRIKLDTVAALSAFCEKASTGVLVAPTLSIGSILLQQAAI 179
           +VY+NVKQATAFGMKSVVYVPRIK +TV+ALSA C+KA+ G LVAPTLSIGSILLQQA I
Sbjct: 116 TVYENVKQATAFGMKSVVYVPRIKPETVSALSALCDKATMGCLVAPTLSIGSILLQQAVI 175

Query: 180 SASFHYSNVEIVESKANASDLPSADANQIAKNLSDLGQIYNREDPSTDVLARGQVLG-DG 238
            ASFHY+NVE+VES+ NA+DLPS +A QIA N+S+LGQIYNRED STDV ARGQV+G DG
Sbjct: 176 MASFHYNNVELVESRPNAADLPSPEAIQIANNISNLGQIYNREDSSTDVQARGQVIGEDG 235

Query: 239 IRVHSMVLPGLPSSTTVHFSGPGEIYSIKHDITDVKCLMPGLLLAIRKVVRLKNLVYGLE 298
           +RVHSMVLPGLPSST V+FS PG++Y++KHDI DV+ LMPGLLLAIRKVVRLKNLVYGLE
Sbjct: 236 VRVHSMVLPGLPSSTQVYFSSPGDVYTVKHDIIDVRSLMPGLLLAIRKVVRLKNLVYGLE 295

Query: 299 KFL 301
           KFL
Sbjct: 296 KFL 298