Miyakogusa Predicted Gene
- Lj2g3v0371710.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0371710.1 Non Chatacterized Hit- tr|D8SSA7|D8SSA7_SELML
Putative uncharacterized protein OS=Selaginella
moelle,32.67,1e-18,PPR_2,Pentatricopeptide repeat;
PPR,Pentatricopeptide repeat; PPR: pentatricopeptide repeat
domain,P,CUFF.34539.1
(345 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 299 1e-81
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 299 1e-81
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 138 6e-33
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 109 3e-24
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 109 3e-24
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 1e-23
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 3e-23
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 3e-23
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 4e-23
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 6e-23
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 1e-22
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 102 5e-22
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 6e-22
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 8e-22
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 1e-21
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 1e-21
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 99 3e-21
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 4e-21
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 5e-21
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 6e-21
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 97 2e-20
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 3e-20
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 3e-20
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 96 4e-20
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 4e-20
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 6e-20
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 7e-20
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 1e-19
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 2e-19
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 3e-19
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 3e-19
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 3e-19
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 3e-19
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 5e-19
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 6e-19
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 7e-19
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 7e-19
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 8e-19
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 8e-19
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 91 9e-19
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 2e-18
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 2e-18
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 2e-18
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 4e-18
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 4e-18
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 4e-18
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 4e-18
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 5e-18
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 5e-18
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 5e-18
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 5e-18
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 6e-18
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 6e-18
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 6e-18
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 7e-18
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 9e-18
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 1e-17
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 1e-17
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 87 2e-17
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 3e-17
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 3e-17
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 3e-17
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 4e-17
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 4e-17
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 4e-17
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 4e-17
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 6e-17
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 6e-17
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 85 6e-17
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 6e-17
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 6e-17
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 7e-17
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 8e-17
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 8e-17
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 9e-17
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 5e-16
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 82 8e-16
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 81 1e-15
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 1e-15
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 1e-15
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 3e-15
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 4e-15
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 4e-15
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 5e-15
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 79 5e-15
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 79 5e-15
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 7e-15
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 7e-15
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 7e-15
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 7e-15
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 7e-15
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 8e-15
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 78 1e-14
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 1e-14
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 3e-14
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 3e-14
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 75 5e-14
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 8e-14
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 8e-14
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 5e-13
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 71 9e-13
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 71 1e-12
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 1e-12
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 1e-12
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 3e-12
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 69 3e-12
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 4e-12
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 8e-12
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 68 1e-11
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 1e-11
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 1e-11
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 67 2e-11
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 3e-11
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 3e-11
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 66 3e-11
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 66 4e-11
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 4e-11
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 6e-11
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 65 6e-11
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-11
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 65 7e-11
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 65 9e-11
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 64 1e-10
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 64 1e-10
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 2e-10
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 62 4e-10
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 62 6e-10
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 62 6e-10
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 60 3e-09
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 59 4e-09
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 59 7e-09
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 8e-09
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 9e-09
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 58 1e-08
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 1e-08
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 6e-08
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 55 8e-08
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 3e-07
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 52 4e-07
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 52 6e-07
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 6e-07
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 7e-07
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 7e-07
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 52 8e-07
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 9e-07
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 9e-07
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 50 2e-06
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 50 2e-06
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 50 2e-06
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 50 3e-06
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 50 3e-06
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT3G02490.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 3e-06
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 4e-06
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 4e-06
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 4e-06
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 4e-06
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-06
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 6e-06
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 7e-06
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 299 bits (766), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 147/226 (65%), Positives = 177/226 (78%), Gaps = 7/226 (3%)
Query: 120 DSFLDKFKLGFDNKAGNSSETNQSEEATKSSNSNQPAMPEDADEIFKKMKETGLIPNAVA 179
D FL++FKLG + +S ET + E+ + PED+DEIFKKMKE GLIPNAVA
Sbjct: 84 DGFLEQFKLGVNQ---DSRETPKPEQYPQEPLPP----PEDSDEIFKKMKEGGLIPNAVA 136
Query: 180 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 239
MLDGLCKDGLVQEA+KLFGLMR+KGTIPE+VIYTAVVE + KAHK +DAKRIFRKMQ+NG
Sbjct: 137 MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNG 196
Query: 240 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAK 299
I+PNAFSY VLVQGL C+ L DA FC EMLE+GHSPNV TFV+LV+ C+ +G+E+A+
Sbjct: 197 IAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQ 256
Query: 300 GAIKTLIEKGFAVNEKAVKDFLNKKKPFSPSVWEAIFGKKAPQMPF 345
AI TL +KGFAVN KAVK+F++K+ PF WEAIF KK + PF
Sbjct: 257 SAIDTLNQKGFAVNVKAVKEFMDKRAPFPSLAWEAIFKKKPTEKPF 302
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 299 bits (766), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 147/226 (65%), Positives = 177/226 (78%), Gaps = 7/226 (3%)
Query: 120 DSFLDKFKLGFDNKAGNSSETNQSEEATKSSNSNQPAMPEDADEIFKKMKETGLIPNAVA 179
D FL++FKLG + +S ET + E+ + PED+DEIFKKMKE GLIPNAVA
Sbjct: 84 DGFLEQFKLGVNQ---DSRETPKPEQYPQEPLPP----PEDSDEIFKKMKEGGLIPNAVA 136
Query: 180 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 239
MLDGLCKDGLVQEA+KLFGLMR+KGTIPE+VIYTAVVE + KAHK +DAKRIFRKMQ+NG
Sbjct: 137 MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNG 196
Query: 240 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAK 299
I+PNAFSY VLVQGL C+ L DA FC EMLE+GHSPNV TFV+LV+ C+ +G+E+A+
Sbjct: 197 IAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQ 256
Query: 300 GAIKTLIEKGFAVNEKAVKDFLNKKKPFSPSVWEAIFGKKAPQMPF 345
AI TL +KGFAVN KAVK+F++K+ PF WEAIF KK + PF
Sbjct: 257 SAIDTLNQKGFAVNVKAVKEFMDKRAPFPSLAWEAIFKKKPTEKPF 302
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 109/173 (63%), Gaps = 1/173 (0%)
Query: 154 QPAMPEDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 213
+P P++ EIF KM+ G AV M D L KDG EAL+LF +++K +P++V +T
Sbjct: 177 EPEDPKNLQEIFHKMRTEGFTNEAVKMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHT 236
Query: 214 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRL-QDAFEFCVEMLE 272
A+VE Y A +A + ++F +M ++G+SPNA++Y+VL++GL + +DA ++ +EM+
Sbjct: 237 AIVEAYANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMG 296
Query: 273 AGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLNKKK 325
G SPN T+ + E F +E E A+ ++ + KGF +EKAV++ L K+
Sbjct: 297 NGMSPNAATYTAVFEAFVREGKEESARELLQEMKGKGFVPDEKAVREALEYKR 349
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 90/157 (57%), Gaps = 3/157 (1%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A+E F +M G++P+ V ++DG CK G ++ A K F M + P+++ YTA++
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G+ + +A ++F +M G+ P++ ++T L+ G CK ++DAF M++AG S
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
PNV T+ L++G CKE ++ A + + + G N
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 75/141 (53%), Gaps = 3/141 (2%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A + F +M + P+ + A++ G C+ G + EA KLF M KG P+ V +T ++
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
GY KA DA R+ M G SPN +YT L+ GLCK L A E EM + G P
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 278 NVTTFVDLVEGFCKEQGIEEA 298
N+ T+ +V G CK IEEA
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEA 510
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 88/166 (53%), Gaps = 3/166 (1%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+ A+E+ +M + GL PN ++++GLCK G ++EA+KL G G + V YT +
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++ Y K+ + D A+ I ++M G+ P ++ VL+ G C L+D + ML G
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFL 321
+PN TTF LV+ +C ++ A K + +G + K ++ +
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 86/154 (55%), Gaps = 3/154 (1%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A ++F +M GL P++V +++G CK G +++A ++ M + G P +V YT ++
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+G K D A + +M G+ PN F+Y +V GLCK +++A + E AG +
Sbjct: 464 DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 523
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
+ T+ L++ +CK +++A+ +K ++ KG
Sbjct: 524 ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 3/158 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+DA + M + G PN V ++DGLCK+G + A +L M + G P I Y ++
Sbjct: 438 KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 497
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
V G K+ ++A ++ + ++ G++ + +YT L+ CK + A E EML G
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
P + TF L+ GFC +E+ + + ++ KG A N
Sbjct: 558 QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 83/154 (53%), Gaps = 3/154 (1%)
Query: 163 EIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 219
++ + MK GL PN+ +++ LC+ + EA + F M +G +P+ V+YT +++G+
Sbjct: 302 KLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGF 361
Query: 220 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNV 279
K A + F +M S I+P+ +YT ++ G C+ + +A + EM G P+
Sbjct: 362 CKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDS 421
Query: 280 TTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
TF +L+ G+CK +++A +I+ G + N
Sbjct: 422 VTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 455
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 74/138 (53%), Gaps = 3/138 (2%)
Query: 164 IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
+F++ E G+ N + ++ +C+ G ++EA L LM KG P+++ Y+ VV GY
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
+ + D ++ M+ G+ PN++ Y ++ LC+ +L +A E EM+ G P+
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 281 TFVDLVEGFCKEQGIEEA 298
+ L++GFCK I A
Sbjct: 353 VYTTLIDGFCKRGDIRAA 370
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 4/170 (2%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+ A EI K+M GL P V +++G C G++++ KL M KG P + ++
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 602
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
V+ Y + A I++ M S G+ P+ +Y LV+G CK +++A+ EM G
Sbjct: 603 VKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLNKKK 325
S +V+T+ L++GF K + EA+ + +G A +K + DF + K
Sbjct: 663 SVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAA-DKEIFDFFSDTK 711
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 82/172 (47%), Gaps = 3/172 (1%)
Query: 154 QPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIV 210
Q ++A + M+ G P+ ++ +++G C+ G + + KL +M+ KG P
Sbjct: 258 QLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSY 317
Query: 211 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 270
IY +++ + K +A+ F +M GI P+ YT L+ G CK ++ A +F EM
Sbjct: 318 IYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEM 377
Query: 271 LEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
+P+V T+ ++ GFC+ + EA + KG + + +N
Sbjct: 378 HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Query: 188 GLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTK-AHKADDAKRIFRKMQSNGISPNAFS 246
GL++EA ++F M G + + + +K +K A +FR+ G+ N S
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 248
Query: 247 YTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLI 306
Y +++ +C+ R+++A + M G++P+V ++ +V G+C+ +++ I+ +
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 307 EKGFAVN 313
KG N
Sbjct: 309 RKGLKPN 315
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 66/158 (41%), Gaps = 4/158 (2%)
Query: 156 AMPEDADEIFKKMKETGLI---PNAVAMLDGLCKDGL-VQEALKLFGLMREKGTIPEIVI 211
+ +A +F+KM GL+ + L L KD A+ +F E G +
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 248
Query: 212 YTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEML 271
Y V+ + + +A + M+ G +P+ SY+ +V G C+ L ++ M
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 272 EAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
G PN + ++ C+ + EA+ A +I +G
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 346
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 90/157 (57%), Gaps = 3/157 (1%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A+E F +M G++P+ V ++DG CK G ++ A K F M + P+++ YTA++
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G+ + +A ++F +M G+ P++ ++T L+ G CK ++DAF M++AG S
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
PNV T+ L++G CKE ++ A + + + G N
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 75/141 (53%), Gaps = 3/141 (2%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A + F +M + P+ + A++ G C+ G + EA KLF M KG P+ V +T ++
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
GY KA DA R+ M G SPN +YT L+ GLCK L A E EM + G P
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 278 NVTTFVDLVEGFCKEQGIEEA 298
N+ T+ +V G CK IEEA
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEA 510
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 88/166 (53%), Gaps = 3/166 (1%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+ A+E+ +M + GL PN ++++GLCK G ++EA+KL G G + V YT +
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++ Y K+ + D A+ I ++M G+ P ++ VL+ G C L+D + ML G
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFL 321
+PN TTF LV+ +C ++ A K + +G + K ++ +
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 86/154 (55%), Gaps = 3/154 (1%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A ++F +M GL P++V +++G CK G +++A ++ M + G P +V YT ++
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+G K D A + +M G+ PN F+Y +V GLCK +++A + E AG +
Sbjct: 464 DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 523
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
+ T+ L++ +CK +++A+ +K ++ KG
Sbjct: 524 ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 3/158 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+DA + M + G PN V ++DGLCK+G + A +L M + G P I Y ++
Sbjct: 438 KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 497
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
V G K+ ++A ++ + ++ G++ + +YT L+ CK + A E EML G
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
P + TF L+ GFC +E+ + + ++ KG A N
Sbjct: 558 QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 83/154 (53%), Gaps = 3/154 (1%)
Query: 163 EIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 219
++ + MK GL PN+ +++ LC+ + EA + F M +G +P+ V+YT +++G+
Sbjct: 302 KLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGF 361
Query: 220 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNV 279
K A + F +M S I+P+ +YT ++ G C+ + +A + EM G P+
Sbjct: 362 CKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDS 421
Query: 280 TTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
TF +L+ G+CK +++A +I+ G + N
Sbjct: 422 VTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 455
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 74/138 (53%), Gaps = 3/138 (2%)
Query: 164 IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
+F++ E G+ N + ++ +C+ G ++EA L LM KG P+++ Y+ VV GY
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
+ + D ++ M+ G+ PN++ Y ++ LC+ +L +A E EM+ G P+
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 281 TFVDLVEGFCKEQGIEEA 298
+ L++GFCK I A
Sbjct: 353 VYTTLIDGFCKRGDIRAA 370
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 4/170 (2%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+ A EI K+M GL P V +++G C G++++ KL M KG P + ++
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 602
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
V+ Y + A I++ M S G+ P+ +Y LV+G CK +++A+ EM G
Sbjct: 603 VKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLNKKK 325
S +V+T+ L++GF K + EA+ + +G A +K + DF + K
Sbjct: 663 SVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAA-DKEIFDFFSDTK 711
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 82/172 (47%), Gaps = 3/172 (1%)
Query: 154 QPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIV 210
Q ++A + M+ G P+ ++ +++G C+ G + + KL +M+ KG P
Sbjct: 258 QLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSY 317
Query: 211 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 270
IY +++ + K +A+ F +M GI P+ YT L+ G CK ++ A +F EM
Sbjct: 318 IYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEM 377
Query: 271 LEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
+P+V T+ ++ GFC+ + EA + KG + + +N
Sbjct: 378 HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Query: 188 GLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTK-AHKADDAKRIFRKMQSNGISPNAFS 246
GL++EA ++F M G + + + +K +K A +FR+ G+ N S
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 248
Query: 247 YTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLI 306
Y +++ +C+ R+++A + M G++P+V ++ +V G+C+ +++ I+ +
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 307 EKGFAVN 313
KG N
Sbjct: 309 RKGLKPN 315
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 66/158 (41%), Gaps = 4/158 (2%)
Query: 156 AMPEDADEIFKKMKETGLI---PNAVAMLDGLCKDGL-VQEALKLFGLMREKGTIPEIVI 211
+ +A +F+KM GL+ + L L KD A+ +F E G +
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 248
Query: 212 YTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEML 271
Y V+ + + +A + M+ G +P+ SY+ +V G C+ L ++ M
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 272 EAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
G PN + ++ C+ + EA+ A +I +G
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 346
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 92/161 (57%), Gaps = 6/161 (3%)
Query: 152 SNQPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPE 208
S Q A+ A E+ +KM+E + +AV ++DGLCKDG + A LF M KG +
Sbjct: 241 SGQTAL---AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD 297
Query: 209 IVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCV 268
I+ Y ++ G+ A + DD ++ R M ISPN +++VL+ K +L++A +
Sbjct: 298 IITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLK 357
Query: 269 EMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
EM++ G +PN T+ L++GFCKE +EEA + +I KG
Sbjct: 358 EMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 86/142 (60%), Gaps = 3/142 (2%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+AD++ K+M + G+ PN + +++DG CK+ ++EA+++ LM KG P+I+ + ++
Sbjct: 351 EADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILI 410
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
GY KA++ DD +FR+M G+ N +Y LVQG C+ +L+ A + EM+
Sbjct: 411 NGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVR 470
Query: 277 PNVTTFVDLVEGFCKEQGIEEA 298
P++ ++ L++G C +E+A
Sbjct: 471 PDIVSYKILLDGLCDNGELEKA 492
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 81/157 (51%), Gaps = 3/157 (1%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA + +M ETG PN V +L+ +CK G A++L M E+ + V Y+ ++
Sbjct: 211 DAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+G K D+A +F +M+ G + +Y L+ G C R D + +M++ S
Sbjct: 271 DGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
PNV TF L++ F KE + EA +K ++++G A N
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 83/153 (54%), Gaps = 3/153 (1%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+D ++ + M + + PN V ++D K+G ++EA +L M ++G P + Y ++
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSL 374
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++G+ K ++ ++A ++ M S G P+ ++ +L+ G CK +R+ D E EM G
Sbjct: 375 IDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGV 434
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
N T+ LV+GFC+ +E AK + ++ +
Sbjct: 435 IANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSR 467
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 86/172 (50%), Gaps = 3/172 (1%)
Query: 154 QPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIV 210
Q E A ++F++M + P+ V+ +LDGLC +G +++AL++FG + + +I
Sbjct: 450 QSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIG 509
Query: 211 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 270
IY ++ G A K DDA +F + G+ +A +Y +++ LC+ L A +M
Sbjct: 510 IYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKM 569
Query: 271 LEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
E GH+P+ T+ L+ + A I+ + GF + VK +N
Sbjct: 570 TEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVIN 621
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 78/157 (49%), Gaps = 3/157 (1%)
Query: 160 DADEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A E+ +M E G P + + ++GLC +G V +A+ L M E G P V Y V+
Sbjct: 176 EALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVL 235
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
K+ + A + RKM+ I +A Y++++ GLCK L +AF EM G
Sbjct: 236 NVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFK 295
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
++ T+ L+ GFC ++ ++ +I++ + N
Sbjct: 296 ADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 332
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 3/168 (1%)
Query: 158 PEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 214
+DA ++F+ M ++ +P + + + K + L L M KG I +
Sbjct: 69 ADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSI 128
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
++ + + K A K+ G P+ + L+ GLC R+ +A E M+E G
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188
Query: 275 HSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
H P + T LV G C + +A I ++E GF NE LN
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLN 236
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 3/147 (2%)
Query: 167 KMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAH 223
K+ + G P+ V +L+GLC + V EAL+L M E G P ++ +V G
Sbjct: 148 KIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNG 207
Query: 224 KADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFV 283
K DA + +M G PN +Y ++ +CK + A E +M E + +
Sbjct: 208 KVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 267
Query: 284 DLVEGFCKEQGIEEAKGAIKTLIEKGF 310
+++G CK+ ++ A + KGF
Sbjct: 268 IIIDGLCKDGSLDNAFNLFNEMEIKGF 294
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 57/131 (43%), Gaps = 3/131 (2%)
Query: 164 IFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
+ K+M+ G+ I M++ C+ + A G + + G P+ VI+ ++ G
Sbjct: 110 LCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLC 169
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
+ +A + +M G P + LV GLC ++ DA M+E G PN
Sbjct: 170 LECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEV 229
Query: 281 TFVDLVEGFCK 291
T+ ++ CK
Sbjct: 230 TYGPVLNVMCK 240
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 80/139 (57%), Gaps = 3/139 (2%)
Query: 163 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 219
+IF +M + G P++ ++ GLC+ G + EA KLF M EK P +V YT+++ G
Sbjct: 178 KIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGL 237
Query: 220 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNV 279
+ D+A R +M+S GI PN F+Y+ L+ GLCK R A E M+ G PN+
Sbjct: 238 CGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNM 297
Query: 280 TTFVDLVEGFCKEQGIEEA 298
T+ L+ G CKEQ I+EA
Sbjct: 298 VTYTTLITGLCKEQKIQEA 316
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 29/208 (13%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A ++MK G+ PN +++DGLCKDG +A++LF +M +G P +V YT +
Sbjct: 244 DEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTL 303
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ G K K +A + +M G+ P+A Y ++ G C S+ ++A F EM+ G
Sbjct: 304 ITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGI 363
Query: 276 SPN-------VTTFVDLVEGFC--------------KEQGI----EEAKGAIKTLIEKG- 309
+PN V T ++V G C + +GI E + +K L +KG
Sbjct: 364 TPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGE 423
Query: 310 FAVNEKAVKDFLNKKKPFSPSVWEAIFG 337
F + V + + S W+ + G
Sbjct: 424 FQKAVQLVDEIVTDGCIPSKGTWKLLIG 451
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 80/153 (52%), Gaps = 4/153 (2%)
Query: 161 ADEIFKKMKETGLIPNAVAM---LDGLCK-DGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
A + +K M+E GL P ++ + LC+ DG V LK+F M ++G P+ Y ++
Sbjct: 140 AFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLI 199
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G + + D+AK++F +M +P +YT L+ GLC + +A + EM G
Sbjct: 200 SGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIE 259
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
PNV T+ L++G CK+ +A + ++ +G
Sbjct: 260 PNVFTYSSLMDGLCKDGRSLQAMELFEMMMARG 292
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 3/158 (1%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A ++F +M E P V ++++GLC V EA++ M+ KG P + Y+++
Sbjct: 209 DEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSL 268
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++G K ++ A +F M + G PN +YT L+ GLCK ++Q+A E M G
Sbjct: 269 MDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGL 328
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
P+ + ++ GFC EA + +I G N
Sbjct: 329 KPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPN 366
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 78/159 (49%), Gaps = 12/159 (7%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKD-GLVQ---EALKLFGLMREKGTIPEIVIYT 213
A+++ +MK I N V +L +C+ G V ++L++F M++ P Y
Sbjct: 70 AEDLIVRMK----IENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYV 125
Query: 214 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDA-FEFCVEMLE 272
V+ + ++ + A + ++ M+ G+ P S VL++ LC+ DA + +EM +
Sbjct: 126 TVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPK 185
Query: 273 AGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
G P+ T+ L+ G C+ I+EAK ++EK A
Sbjct: 186 RGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCA 224
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 89/156 (57%), Gaps = 3/156 (1%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
AD+ K+M+E G++PN V +++ CK G V EA + M ++G + + YT ++
Sbjct: 541 ADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMN 600
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G K K DDA+ IFR+M+ GI+P+ FSY VL+ G K +Q A EM+E G +P
Sbjct: 601 GLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTP 660
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
NV + L+ GFC+ IE+AK + + KG N
Sbjct: 661 NVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPN 696
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 85/165 (51%), Gaps = 3/165 (1%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A I K+M +G PN V ++ ++ +A+++ M+E+G P+I Y +++
Sbjct: 436 AYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLII 495
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G +KA + D+A+ +M NG+ PNAF+Y + G + S A ++ EM E G P
Sbjct: 496 GLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLP 555
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
N L+ +CK+ + EA A ++++++G + K +N
Sbjct: 556 NKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMN 600
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 82/164 (50%), Gaps = 3/164 (1%)
Query: 163 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 219
E+ +MK+ ++ + ++ G+C G + A + M G P +VIYT +++ +
Sbjct: 403 ELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTF 462
Query: 220 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNV 279
+ + DA R+ ++M+ GI+P+ F Y L+ GL K R+ +A F VEM+E G PN
Sbjct: 463 LQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNA 522
Query: 280 TTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLNK 323
T+ + G+ + A +K + E G N+ +N+
Sbjct: 523 FTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINE 566
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 87/173 (50%), Gaps = 3/173 (1%)
Query: 153 NQPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEI 209
++ + E A +F M +GLIP A A +++G C++ V++ +L M+++ +
Sbjct: 358 SKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISP 417
Query: 210 VIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVE 269
Y VV+G + D A I ++M ++G PN YT L++ + SR DA E
Sbjct: 418 YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKE 477
Query: 270 MLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
M E G +P++ + L+ G K + ++EA+ + ++E G N F++
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFIS 530
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 78/158 (49%), Gaps = 3/158 (1%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A +M E GL PNA A + G + A K MRE G +P V+ T +
Sbjct: 504 DEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGL 563
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ Y K K +A +R M GI +A +YTVL+ GL K ++ DA E EM G
Sbjct: 564 INEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI 623
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
+P+V ++ L+ GF K +++A ++E+G N
Sbjct: 624 APDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPN 661
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 77/157 (49%), Gaps = 8/157 (5%)
Query: 175 PNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRI 231
PN V M+D LCK+G ++ A +LF M+ +P ++ YT+++ GY K + + +
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862
Query: 232 FRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM-----LEAGHSPNVTTFVDLV 286
F + + GI P+ Y+V++ K A +M ++ G +++T L+
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922
Query: 287 EGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLNK 323
GF K +E A+ ++ ++ + + V + +N+
Sbjct: 923 SGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINE 959
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 68/138 (49%), Gaps = 7/138 (5%)
Query: 167 KMKET----GLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 219
K+KE+ GL+P ++DGLCK +++A L M G + Y+ +++G
Sbjct: 263 KLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGL 322
Query: 220 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNV 279
K AD AK + +M S+GI+ + Y + + K ++ A M+ +G P
Sbjct: 323 LKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQA 382
Query: 280 TTFVDLVEGFCKEQGIEE 297
+ L+EG+C+E+ + +
Sbjct: 383 QAYASLIEGYCREKNVRQ 400
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%)
Query: 220 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNV 279
T D A ++ M G+ P ++Y VL+ GLCK RL+DA VEM G S +
Sbjct: 253 TATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDN 312
Query: 280 TTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAV 312
T+ L++G K + + AKG + ++ G +
Sbjct: 313 HTYSLLIDGLLKGRNADAAKGLVHEMVSHGINI 345
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 83/142 (58%), Gaps = 3/142 (2%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A E++ +M G+ P+ + +++DG CK+ + EA ++F LM KG P+IV Y+ ++
Sbjct: 333 EAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILI 392
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
Y KA + DD R+FR++ S G+ PN +Y LV G C+ +L A E EM+ G
Sbjct: 393 NSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVP 452
Query: 277 PNVTTFVDLVEGFCKEQGIEEA 298
P+V T+ L++G C + +A
Sbjct: 453 PSVVTYGILLDGLCDNGELNKA 474
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 83/152 (54%), Gaps = 3/152 (1%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A ++F+KM+E + + V ++D LCKDG +AL LF M KG ++V Y++++
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G K DD ++ R+M I P+ +++ L+ K +L +A E EM+ G +P
Sbjct: 289 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP 348
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
+ T+ L++GFCKE + EA ++ KG
Sbjct: 349 DTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 82/154 (53%), Gaps = 3/154 (1%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+D ++ ++M +IP+ V A++D K+G + EA +L+ M +G P+ + Y ++
Sbjct: 297 DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 356
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++G+ K + +A ++F M S G P+ +Y++L+ CK R+ D E+ G
Sbjct: 357 IDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 416
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
PN T+ LV GFC+ + AK + ++ +G
Sbjct: 417 IPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG 450
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 80/154 (51%), Gaps = 3/154 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+D +F+++ GLIPN + ++ G C+ G + A +LF M +G P +V Y +
Sbjct: 402 DDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGIL 461
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++G + + A IF KMQ + ++ Y +++ G+C S++ DA+ + + G
Sbjct: 462 LDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGV 521
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
P+V T+ ++ G CK+ + EA + + E G
Sbjct: 522 KPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 555
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 86/158 (54%), Gaps = 3/158 (1%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+DA +F +M+ G+ + V +++ GLC DG + K+ M + IP++V ++A+
Sbjct: 262 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 321
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++ + K K +AK ++ +M + GI+P+ +Y L+ G CK + L +A + M+ G
Sbjct: 322 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC 381
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
P++ T+ L+ +CK + +++ + + KG N
Sbjct: 382 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPN 419
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 83/161 (51%), Gaps = 3/161 (1%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A E+F++M G+ P+ V +LDGLC +G + +AL++F M++ I IY ++
Sbjct: 439 AKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIH 498
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G A K DDA +F + G+ P+ +Y V++ GLCK L +A +M E G +P
Sbjct: 499 GMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTP 558
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVK 318
+ T+ L+ G+ + I+ + GF+ + +K
Sbjct: 559 DDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIK 599
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 77/155 (49%), Gaps = 3/155 (1%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A + +M E G P+ V +L+ LCK G AL LF M E+ +V Y+ V+
Sbjct: 193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVI 252
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+ K DDA +F +M+ GI + +Y+ L+ GLC + D + EM+
Sbjct: 253 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 312
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
P+V TF L++ F KE + EAK +I +G A
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIA 347
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 3/150 (2%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A + +M E P+ V +++GLC G V EAL L M E G P+ V Y V+
Sbjct: 158 EAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVL 217
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
K+ + A +FRKM+ I + Y++++ LCK DA EM G
Sbjct: 218 NRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIK 277
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLI 306
+V T+ L+ G C + ++ ++ +I
Sbjct: 278 ADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 55/118 (46%)
Query: 190 VQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTV 249
V +A+ LF M + +P + + + + + D + M+ NGI + ++ T+
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110
Query: 250 LVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIE 307
++ C+ +L AF + G+ P+ TF LV GFC E + EA + ++E
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVE 168
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 53/124 (42%)
Query: 200 MREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSR 259
M G ++ T ++ Y + K A + + G P+ +++ LV G C R
Sbjct: 96 MELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGR 155
Query: 260 LQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKD 319
+ +A M+E P++ T L+ G C + + EA I ++E GF +E
Sbjct: 156 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP 215
Query: 320 FLNK 323
LN+
Sbjct: 216 VLNR 219
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 97/174 (55%), Gaps = 6/174 (3%)
Query: 152 SNQPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPE 208
S Q A+ A E+ +KM+E + +AV ++DGLCKDG + A LF M KG +
Sbjct: 225 SGQTAL---AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD 281
Query: 209 IVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCV 268
I+IYT ++ G+ A + DD ++ R M I+P+ +++ L+ K +L++A E
Sbjct: 282 IIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHK 341
Query: 269 EMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
EM++ G SP+ T+ L++GFCKE +++A + ++ KG N + +N
Sbjct: 342 EMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 76/134 (56%), Gaps = 3/134 (2%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A+E+ K+M + G+ P+ V +++DG CK+ + +A + LM KG P I + ++
Sbjct: 335 EAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILI 394
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
GY KA+ DD +FRKM G+ + +Y L+QG C+ +L+ A E EM+
Sbjct: 395 NGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVR 454
Query: 277 PNVTTFVDLVEGFC 290
P++ ++ L++G C
Sbjct: 455 PDIVSYKILLDGLC 468
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 86/163 (52%), Gaps = 3/163 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A E+F++M + P+ V+ +LDGLC +G ++AL++F + + +I IY +
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ G A K DDA +F + G+ P+ +Y +++ GLCK L +A +M E GH
Sbjct: 499 IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH 558
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVK 318
SPN T+ L+ E ++ I+ + GF+V+ VK
Sbjct: 559 SPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVK 601
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 83/153 (54%), Gaps = 3/153 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+D ++ + M + + P+ VA ++D K+G ++EA +L M ++G P+ V YT++
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++G+ K ++ D A + M S G PN ++ +L+ G CK + + D E +M G
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
+ T+ L++GFC+ +E AK + ++ +
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSR 451
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 3/155 (1%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA + +M ETG PN V +L +CK G A++L M E+ + V Y+ ++
Sbjct: 195 DAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIII 254
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+G K D+A +F +M+ G + YT L++G C R D + +M++ +
Sbjct: 255 DGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKIT 314
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
P+V F L++ F KE + EA+ K +I++G +
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 77/152 (50%), Gaps = 3/152 (1%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A E+ +M E G P + A+++GLC +G V +A+ L M E G P V Y V+
Sbjct: 160 EALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVL 219
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+ K+ + A + RKM+ I +A Y++++ GLCK L +AF EM G
Sbjct: 220 KVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFK 279
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
++ + L+ GFC ++ ++ +I++
Sbjct: 280 ADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR 311
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 84/160 (52%), Gaps = 3/160 (1%)
Query: 157 MPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 213
+ +D E+F+KM G++ + V ++ G C+ G ++ A +LF M + P+IV Y
Sbjct: 402 LIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYK 461
Query: 214 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 273
+++G + + A IF K++ + + + Y +++ G+C S++ DA++ +
Sbjct: 462 ILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK 521
Query: 274 GHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
G P+V T+ ++ G CK+ + EA + + E G + N
Sbjct: 522 GVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPN 561
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 3/147 (2%)
Query: 167 KMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAH 223
K+ + G P+ V +++GLC +G V EAL+L M E G P ++ A+V G
Sbjct: 132 KIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNG 191
Query: 224 KADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFV 283
K DA + +M G PN +Y +++ +CK + A E +M E + +
Sbjct: 192 KVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYS 251
Query: 284 DLVEGFCKEQGIEEAKGAIKTLIEKGF 310
+++G CK+ ++ A + KGF
Sbjct: 252 IIIDGLCKDGSLDNAFNLFNEMEIKGF 278
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 53/122 (43%)
Query: 193 ALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQ 252
L L M KG + + ++ + K A K+ G P+ +++ L+
Sbjct: 91 VLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLIN 150
Query: 253 GLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAV 312
GLC R+ +A E M+E GH P + T LV G C + +A I ++E GF
Sbjct: 151 GLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQP 210
Query: 313 NE 314
NE
Sbjct: 211 NE 212
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 60/118 (50%)
Query: 192 EALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLV 251
+A+ LF M P ++ ++ + + + D + ++M+ GI+ N ++ ++++
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 252 QGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
C+C +L AF ++++ G+ P+ TF L+ G C E + EA + ++E G
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMG 172
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 59/132 (44%), Gaps = 3/132 (2%)
Query: 163 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 219
++ K+M+ G+ N M++ C+ + A G + + G P+ V ++ ++ G
Sbjct: 93 DLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGL 152
Query: 220 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNV 279
+ +A + +M G P + LV GLC ++ DA M+E G PN
Sbjct: 153 CLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNE 212
Query: 280 TTFVDLVEGFCK 291
T+ +++ CK
Sbjct: 213 VTYGPVLKVMCK 224
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 163 EIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 219
E+++KM+E G+ PN +++ LCKDG ++A ++F MRE+G IV Y ++ G
Sbjct: 254 EMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGL 313
Query: 220 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNV 279
+ K ++A ++ +M+S+GI+PN +Y L+ G C +L A C ++ G SP++
Sbjct: 314 CREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSL 373
Query: 280 TTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
T+ LV GFC++ A +K + E+G
Sbjct: 374 VTYNILVSGFCRKGDTSGAAKMVKEMEERG 403
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 85/158 (53%), Gaps = 3/158 (1%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A+++ +MK G+ PN + ++DG C G + +AL L ++ +G P +V Y +V
Sbjct: 321 EANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILV 380
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G+ + A ++ ++M+ GI P+ +YT+L+ + ++ A + + M E G
Sbjct: 381 SGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLV 440
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNE 314
P+V T+ L+ GFC + + EA K+++EK NE
Sbjct: 441 PDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNE 478
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 77/147 (52%), Gaps = 3/147 (2%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E + ++ ++ E G PN V ++DG CK G +++A LF M + G + YT +
Sbjct: 180 EKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVL 239
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ G K ++ KMQ +G+ PN ++Y ++ LCK R +DAF+ EM E G
Sbjct: 240 INGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGV 299
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAI 302
S N+ T+ L+ G C+E + EA +
Sbjct: 300 SCNIVTYNTLIGGLCREMKLNEANKVV 326
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 85/156 (54%), Gaps = 3/156 (1%)
Query: 159 EDADEIFKKMKETGLIPN---AVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A ++F +M + GL+ N +++GL K+G+ ++ +++ M+E G P + Y V
Sbjct: 215 EKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCV 274
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ K + DA ++F +M+ G+S N +Y L+ GLC+ +L +A + +M G
Sbjct: 275 MNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGI 334
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
+PN+ T+ L++GFC + +A + L +G +
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLS 370
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 77/143 (53%), Gaps = 3/143 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+DA ++F +M+E G+ N V ++ GLC++ + EA K+ M+ G P ++ Y +
Sbjct: 285 KDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTL 344
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++G+ K A + R ++S G+SP+ +Y +LV G C+ A + EM E G
Sbjct: 345 IDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGI 404
Query: 276 SPNVTTFVDLVEGFCKEQGIEEA 298
P+ T+ L++ F + +E+A
Sbjct: 405 KPSKVTYTILIDTFARSDNMEKA 427
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 82/152 (53%), Gaps = 3/152 (1%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A ++ K+M+E G+ P+ V ++D + +++A++L M E G +P++ Y+ ++
Sbjct: 392 AAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIH 451
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G+ + ++A R+F+ M PN Y ++ G CK A + EM E +P
Sbjct: 452 GFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAP 511
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
NV ++ ++E CKE+ +EA+ ++ +I+ G
Sbjct: 512 NVASYRYMIEVLCKERKSKEAERLVEKMIDSG 543
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 76/156 (48%), Gaps = 3/156 (1%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A + + +K GL P+ V ++ G C+ G A K+ M E+G P V YT +++
Sbjct: 357 ALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILID 416
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
+ ++ + A ++ M+ G+ P+ +Y+VL+ G C ++ +A M+E P
Sbjct: 417 TFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEP 476
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
N + ++ G+CKE A +K + EK A N
Sbjct: 477 NEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPN 512
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 72/131 (54%), Gaps = 4/131 (3%)
Query: 159 EDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A ++ M+E GL+P+ ++ G C G + EA +LF M EK P VIY +
Sbjct: 425 EKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTM 484
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ GY K + A ++ ++M+ ++PN SY +++ LCK + ++A +M+++G
Sbjct: 485 ILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGI 544
Query: 276 SPNVTTFVDLV 286
P+ T+ + L+
Sbjct: 545 DPS-TSILSLI 554
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 61/146 (41%), Gaps = 34/146 (23%)
Query: 211 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISP---------------------------- 242
+Y ++ Y ++ + + F +M NG P
Sbjct: 96 LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN 155
Query: 243 ------NAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIE 296
+ +S+ +L++G C+ ++ +F+ +E+ E G SPNV + L++G CK+ IE
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 297 EAKGAIKTLIEKGFAVNEKAVKDFLN 322
+AK + + G NE+ +N
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLIN 241
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 95/169 (56%), Gaps = 6/169 (3%)
Query: 152 SNQPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPE 208
SNQ M +A ++ +M E GLIP +++GLCK G V +A L +M KG P+
Sbjct: 402 SNQ-GMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPD 460
Query: 209 IVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCV 268
I + ++ GY+ K ++A I M NG+ P+ ++Y L+ GLCK S+ +D E
Sbjct: 461 IFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYK 520
Query: 269 EMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAV 317
M+E G +PN+ TF L+E C+ + ++EA G ++ + K +VN AV
Sbjct: 521 TMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNK--SVNPDAV 567
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 80/156 (51%), Gaps = 3/156 (1%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A +F + G+ PN + ++ GL G++ EA +L M EKG IPE+ + +V
Sbjct: 375 ALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVN 434
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G K DA + + M S G P+ F++ +L+ G ++++A E ML+ G P
Sbjct: 435 GLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDP 494
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
+V T+ L+ G CK E+ KT++EKG A N
Sbjct: 495 DVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPN 530
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 97/197 (49%), Gaps = 19/197 (9%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIV-IYTA 214
++A + ++MK + P+AV ++DG CK+G + A LF M E + Y
Sbjct: 548 DEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNI 607
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
++ +T+ A+++F++M + P+ ++Y ++V G CK + ++F +EM+E G
Sbjct: 608 IIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENG 667
Query: 275 HSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF---AVNE------------KAVKD 319
P++TT ++ C E + EA G I +++KG AVN K V +
Sbjct: 668 FIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVNTICDVDKKEVAAPKLVLE 727
Query: 320 FLNKKKPFSPSVWEAIF 336
L KK + +E +F
Sbjct: 728 DLLKKSCITYYAYELLF 744
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 3/155 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A+ KM GL P++ ++ G CK G+VQ A ++ G G +P+ Y ++
Sbjct: 303 QEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSL 362
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++G + + A +F + GI PN Y L++GL + +A + EM E G
Sbjct: 363 IDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGL 422
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
P V TF LV G CK + +A G +K +I KG+
Sbjct: 423 IPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGY 457
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 85/185 (45%), Gaps = 3/185 (1%)
Query: 130 FDNKAGNSSETNQSEEATKSSNSNQPAMPEDADEIFKKMKETGL---IPNAVAMLDGLCK 186
+N + E N T + + E+F KM +G+ + +L LCK
Sbjct: 169 LNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCK 228
Query: 187 DGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFS 246
G V+E KL + ++G +P + Y ++G + + D A R+ + G P+ +
Sbjct: 229 KGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVIT 288
Query: 247 YTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLI 306
Y L+ GLCK S+ Q+A + +M+ G P+ T+ L+ G+CK ++ A+ + +
Sbjct: 289 YNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAV 348
Query: 307 EKGFA 311
GF
Sbjct: 349 FNGFV 353
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 3/157 (1%)
Query: 156 AMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIY 212
M + A+ I G +P+ +++DGLC +G AL LF KG P +++Y
Sbjct: 335 GMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILY 394
Query: 213 TAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 272
+++G + +A ++ +M G+ P ++ +LV GLCK + DA M+
Sbjct: 395 NTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS 454
Query: 273 AGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
G+ P++ TF L+ G+ + +E A + +++ G
Sbjct: 455 KGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNG 491
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 79/158 (50%), Gaps = 3/158 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++ +++ K+ + G++PN + GLC+ G + A+++ G + E+G P+++ Y +
Sbjct: 233 KECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNL 292
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ G K K +A+ KM + G+ P++++Y L+ G CK +Q A + + G
Sbjct: 293 IYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGF 352
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
P+ T+ L++G C E A + KG N
Sbjct: 353 VPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPN 390
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 81/190 (42%), Gaps = 38/190 (20%)
Query: 159 EDADEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+ A +++ +M++ G+ P+ + + CK AL+L M +G +V Y V
Sbjct: 128 DQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTV 187
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGIS---------------------------------- 241
V G+ + + + +F KM ++G+S
Sbjct: 188 VGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGV 247
Query: 242 -PNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKG 300
PN F+Y + +QGLC+ L A ++E G P+V T+ +L+ G CK +EA+
Sbjct: 248 LPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEV 307
Query: 301 AIKTLIEKGF 310
+ ++ +G
Sbjct: 308 YLGKMVNEGL 317
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 83/161 (51%), Gaps = 5/161 (3%)
Query: 152 SNQPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPE 208
S Q M E+A EI M + G+ P+ ++L+GLCK ++ ++ + M EKG P
Sbjct: 472 STQLKM-ENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPN 530
Query: 209 IVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCV 268
+ + ++E + K D+A + +M++ ++P+A ++ L+ G CK L A+
Sbjct: 531 LFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFR 590
Query: 269 EMLEAGH-SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
+M EA S + T+ ++ F ++ + A+ + ++++
Sbjct: 591 KMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDR 631
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 79/166 (47%), Gaps = 3/166 (1%)
Query: 151 NSNQPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIP 207
N + ++A +F++M P A++ L G +A K++ MR++G P
Sbjct: 85 NYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITP 144
Query: 208 EIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFC 267
++ +T ++ + K + A R+ M S G N +Y +V G + + + +E
Sbjct: 145 DVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELF 204
Query: 268 VEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
+ML +G S ++TF L+ CK+ ++E + + +I++G N
Sbjct: 205 GKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPN 250
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 102/190 (53%), Gaps = 6/190 (3%)
Query: 141 NQSEEATKSSNSNQPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLF 197
N+ T +Q +A + ++M + G P+ V A+++G C G +++A+ +
Sbjct: 379 NERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVL 438
Query: 198 GLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKC 257
M+EKG P++V Y+ V+ G+ +++ D+A R+ R+M GI P+ +Y+ L+QG C+
Sbjct: 439 EDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQ 498
Query: 258 SRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF---AVNE 314
R ++A + EML G P+ T+ L+ +C E +E+A ++EKG V
Sbjct: 499 RRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTY 558
Query: 315 KAVKDFLNKK 324
+ + LNK+
Sbjct: 559 SVLINGLNKQ 568
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 81/154 (52%), Gaps = 3/154 (1%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A+ +FK+M E+ + PN ++ G C G + AL LF M KG +P +V Y +++
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 248
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
GY K K DD ++ R M G+ PN SY V++ GLC+ R+++ EM G+S
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
+ T+ L++G+CKE +A ++ G
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLT 342
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 82/147 (55%), Gaps = 3/147 (2%)
Query: 167 KMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAH 223
+M GL P+ + +++ +CK G + A++ MR +G P YT +V+G+++
Sbjct: 335 EMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKG 394
Query: 224 KADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFV 283
++A R+ R+M NG SP+ +Y L+ G C +++DA +M E G SP+V ++
Sbjct: 395 YMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYS 454
Query: 284 DLVEGFCKEQGIEEAKGAIKTLIEKGF 310
++ GFC+ ++EA + ++EKG
Sbjct: 455 TVLSGFCRSYDVDEALRVKREMVEKGI 481
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 92/188 (48%), Gaps = 9/188 (4%)
Query: 138 SETNQSEEATKSSNSNQPAMPEDADEIFKKMKETGLIPN---AVAMLDGLCKDGLVQEAL 194
+ T+ K+ N N+ A E +M+ GL PN ++DG + G + EA
Sbjct: 347 TYTSLIHSMCKAGNMNR------AMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAY 400
Query: 195 KLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGL 254
++ M + G P +V Y A++ G+ K +DA + M+ G+SP+ SY+ ++ G
Sbjct: 401 RVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGF 460
Query: 255 CKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNE 314
C+ + +A EM+E G P+ T+ L++GFC+++ +EA + ++ G +E
Sbjct: 461 CRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDE 520
Query: 315 KAVKDFLN 322
+N
Sbjct: 521 FTYTALIN 528
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 81/144 (56%), Gaps = 3/144 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
EDA + + MKE GL P+ V+ +L G C+ V EAL++ M EKG P+ + Y+++
Sbjct: 432 EDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSL 491
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++G+ + + +A ++ +M G+ P+ F+YT L+ C L+ A + EM+E G
Sbjct: 492 IQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGV 551
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAK 299
P+V T+ L+ G K+ EAK
Sbjct: 552 LPDVVTYSVLINGLNKQSRTREAK 575
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 83/156 (53%), Gaps = 3/156 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+D ++ + M GL PN ++ +++GLC++G ++E + M +G + V Y +
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++GY K A + +M +G++P+ +YT L+ +CK + A EF +M G
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
PN T+ LV+GF ++ + EA ++ + + GF+
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFS 412
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 68/133 (51%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
++ G CK+G +AL + M G P ++ YT+++ KA + A +M+
Sbjct: 315 TLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR 374
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
G+ PN +YT LV G + + +A+ EM + G SP+V T+ L+ G C +E+A
Sbjct: 375 GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDA 434
Query: 299 KGAIKTLIEKGFA 311
++ + EKG +
Sbjct: 435 IAVLEDMKEKGLS 447
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 159 EDADEIFKKMKETGLIPN---AVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A +++++M GL P+ A+++ C +G +++AL+L M EKG +P++V Y+ +
Sbjct: 502 KEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVL 561
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQ---------------GLCKCSRL 260
+ G K + +AKR+ K+ P+ +Y L++ G C +
Sbjct: 562 INGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMM 621
Query: 261 QDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAV 317
+A + ML H P+ T + ++ G C+ I +A K +++ GF ++ V
Sbjct: 622 TEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTV 678
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 4/163 (2%)
Query: 156 AMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGL-VQEALKLFGLMREKGTIPEIVI 211
++ + A I + G +P + A+LD + + A +F M E P +
Sbjct: 148 SLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFT 207
Query: 212 YTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEML 271
Y ++ G+ A D A +F KM++ G PN +Y L+ G CK ++ D F+ M
Sbjct: 208 YNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMA 267
Query: 272 EAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNE 314
G PN+ ++ ++ G C+E ++E + + +G++++E
Sbjct: 268 LKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDE 310
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 38/201 (18%)
Query: 156 AMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIY 212
+ ++A ++F M+ G PN V ++ G CK V++ +K+F M +KG + + Y
Sbjct: 307 GLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITY 366
Query: 213 TAVVEGYTKAHKADDAKRIFRKMQSNGISP------------------------------ 242
T +++GY + D A+ +F +M S P
Sbjct: 367 TVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRK 426
Query: 243 -----NAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEE 297
N +YT+++QG+CK +++DAF+ + G PNV T+ ++ GFC+ I E
Sbjct: 427 REMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHE 486
Query: 298 AKGAIKTLIEKGFAVNEKAVK 318
A K + E GF NE K
Sbjct: 487 ADSLFKKMKEDGFLPNESVYK 507
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 78/142 (54%), Gaps = 3/142 (2%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A E++ M + + P+ ++++GLC GL+ EA ++F LM G P VIYT ++
Sbjct: 276 EAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLI 335
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G+ K+ + +D +IF +M G+ N +YTVL+QG C R A E +M
Sbjct: 336 HGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAP 395
Query: 277 PNVTTFVDLVEGFCKEQGIEEA 298
P++ T+ L++G C +E+A
Sbjct: 396 PDIRTYNVLLDGLCCNGKVEKA 417
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 8/163 (4%)
Query: 136 NSSETNQSEEATKSSNSNQPAMPE-----DADEIFKKMKETGLIPNAV---AMLDGLCKD 187
N TN S + N+ + E DA + + M + + PN + A++D K
Sbjct: 212 NQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKV 271
Query: 188 GLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSY 247
G + EA +L+ +M + P++ Y +++ G D+A+++F M+ NG PN Y
Sbjct: 272 GKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIY 331
Query: 248 TVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFC 290
T L+ G CK R++D + EM + G N T+ L++G+C
Sbjct: 332 TTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYC 374
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 96/212 (45%), Gaps = 14/212 (6%)
Query: 105 GFQGRNRPDVANQLGDSFLDKFKLGFDNKAGNSSETNQSEEATKSSNSNQPAMPEDADEI 164
G+ NR + A L D L +GF K + T K+ + N A E+
Sbjct: 162 GYCHWNRIEDAIALFDQILG---MGF--KPNVVTYTTLIRCLCKNRHLNH------AVEL 210
Query: 165 FKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTK 221
F +M G PN V A++ GLC+ G +A L M ++ P ++ +TA+++ + K
Sbjct: 211 FNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVK 270
Query: 222 AHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTT 281
K +AK ++ M + P+ F+Y L+ GLC L +A + M G PN
Sbjct: 271 VGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVI 330
Query: 282 FVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
+ L+ GFCK + +E+ + +KG N
Sbjct: 331 YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 158 PEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 214
P A KM + G P+ V ++L+G C +++A+ LF + G P +V YT
Sbjct: 134 PCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTT 193
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
++ K + A +F +M +NG PN +Y LV GLC+ R DA +M++
Sbjct: 194 LIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRR 253
Query: 275 HSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIE 307
PNV TF L++ F K + EAK +I+
Sbjct: 254 IEPNVITFTALIDAFVKVGKLMEAKELYNVMIQ 286
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 3/159 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
EDA +F ++ G PN V ++ LCK+ + A++LF M G+ P +V Y A+
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
V G + + DA + R M I PN ++T L+ K +L +A E M++
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNE 314
P+V T+ L+ G C ++EA+ + G NE
Sbjct: 290 YPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNE 328
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 74/148 (50%), Gaps = 3/148 (2%)
Query: 164 IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
+F++M+ G+ P ++ +C A G M + G P++V +T+++ GY
Sbjct: 105 LFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYC 164
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
++ +DA +F ++ G PN +YT L++ LCK L A E +M G PNV
Sbjct: 165 HWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVV 224
Query: 281 TFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
T+ LV G C+ +A ++ ++++
Sbjct: 225 TYNALVTGLCEIGRWGDAAWLLRDMMKR 252
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 60/122 (49%)
Query: 192 EALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLV 251
+AL LF M +P I+ +T ++ K ++ D +F +MQ GI P + +++
Sbjct: 66 DALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVM 125
Query: 252 QGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
+C S+ A F +M++ G P++ TF L+ G+C IE+A ++ GF
Sbjct: 126 HCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFK 185
Query: 312 VN 313
N
Sbjct: 186 PN 187
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 3/142 (2%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA ++F +M + +P+ + +L + K + LF M+ G P + V+
Sbjct: 66 DALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVM 125
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+ + A KM G P+ ++T L+ G C +R++DA ++L G
Sbjct: 126 HCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFK 185
Query: 277 PNVTTFVDLVEGFCKEQGIEEA 298
PNV T+ L+ CK + + A
Sbjct: 186 PNVVTYTTLIRCLCKNRHLNHA 207
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 93/174 (53%), Gaps = 6/174 (3%)
Query: 152 SNQPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPE 208
S Q A+ A E+ +KM+E + +AV ++DGLCK G + A LF M KG
Sbjct: 241 SGQTAL---AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTN 297
Query: 209 IVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCV 268
I+ Y ++ G+ A + DD ++ R M I+PN +++VL+ K +L++A E
Sbjct: 298 IITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHK 357
Query: 269 EMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
EM+ G +P+ T+ L++GFCKE +++A + ++ KG N + +N
Sbjct: 358 EMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN 411
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 76/134 (56%), Gaps = 3/134 (2%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A+E+ K+M G+ P+ + +++DG CK+ + +A ++ LM KG P I + ++
Sbjct: 351 EAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILI 410
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
GY KA++ DD +FRKM G+ + +Y L+QG C+ +L A E EM+
Sbjct: 411 NGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVP 470
Query: 277 PNVTTFVDLVEGFC 290
PN+ T+ L++G C
Sbjct: 471 PNIVTYKILLDGLC 484
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 82/155 (52%), Gaps = 3/155 (1%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A + KM E G PNAV +L+ +CK G A++L M E+ + V Y+ ++
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+G K D+A +F +M+ GI+ N +Y +L+ G C R D + +M++ +
Sbjct: 271 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 330
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
PNV TF L++ F KE + EA+ K +I +G A
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 365
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 85/167 (50%), Gaps = 3/167 (1%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+D ++ + M + + PN V ++D K+G ++EA +L M +G P+ + YT++
Sbjct: 315 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 374
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++G+ K + D A ++ M S G PN ++ +L+ G CK +R+ D E +M G
Sbjct: 375 IDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV 434
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
+ T+ L++GFC+ + AK + ++ + N K L+
Sbjct: 435 VADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLD 481
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 83/161 (51%), Gaps = 3/161 (1%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A E+F++M + PN V +LDGLC +G ++AL++F + + +I IY ++
Sbjct: 457 AKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIH 516
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G A K DDA +F + G+ P +Y +++ GLCK L +A +M E GH+P
Sbjct: 517 GMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAP 576
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVK 318
+ T+ L+ + ++ I+ L GF+V+ +K
Sbjct: 577 DGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIK 617
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 3/152 (1%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A E+ +M E G P+ + +++GLC G EA+ L M E G P V Y V+
Sbjct: 176 EALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVL 235
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
K+ + A + RKM+ I +A Y++++ GLCK L +AF EM G +
Sbjct: 236 NVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGIT 295
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
N+ T+ L+ GFC ++ ++ +I++
Sbjct: 296 TNIITYNILIGGFCNAGRWDDGAKLLRDMIKR 327
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 16/211 (7%)
Query: 105 GFQGRNRPDVANQLGDSFLDKFKLGFD-NKAGNSSETNQSEEATKSSNSNQPAMPEDADE 163
GF N D ANQ+ D + K G D N + N +A + +D E
Sbjct: 377 GFCKENHLDKANQMVDLMVSK---GCDPNIRTFNILINGYCKANR---------IDDGLE 424
Query: 164 IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
+F+KM G++ + V ++ G C+ G + A +LF M + P IV Y +++G
Sbjct: 425 LFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLC 484
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
+++ A IF K++ + + + Y +++ G+C S++ DA++ + G P V
Sbjct: 485 DNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVK 544
Query: 281 TFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
T+ ++ G CK+ + EA+ + + E G A
Sbjct: 545 TYNIMIGGLCKKGPLSEAELLFRKMEEDGHA 575
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 3/150 (2%)
Query: 167 KMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAH 223
K+ + G PN + +++GLC +G V EAL+L M E G P+++ +V G +
Sbjct: 148 KIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSG 207
Query: 224 KADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFV 283
K +A + KM G PNA +Y ++ +CK + A E +M E + +
Sbjct: 208 KEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 267
Query: 284 DLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
+++G CK ++ A + KG N
Sbjct: 268 IIIDGLCKHGSLDNAFNLFNEMEMKGITTN 297
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Query: 186 KDGLVQ----EALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGIS 241
+ GLV +A+ LF M +P ++ ++ + K + D + ++M+ GI+
Sbjct: 61 RSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIA 120
Query: 242 PNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGA 301
N ++ ++++ C+C +L AF ++++ G+ PN TF L+ G C E + EA
Sbjct: 121 HNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALEL 180
Query: 302 IKTLIEKG 309
+ ++E G
Sbjct: 181 VDRMVEMG 188
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 3/167 (1%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+DA ++F+ M + +P + + + K L L M KG + + +
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ + + K A K+ G PN +++ L+ GLC R+ +A E M+E GH
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
P++ T LV G C EA I ++E G N LN
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLN 236
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 88/165 (53%), Gaps = 3/165 (1%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA+++ + M E + P+ V A+++ L K+G V EA +++G M +G P + Y +++
Sbjct: 129 DAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMI 188
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+G+ K + +DAKR+ M S SP+ +++ L+ G CK R+ + E EM G
Sbjct: 189 DGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIV 248
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFL 321
N T+ L+ GFC+ ++ A+ + +I G A N + L
Sbjct: 249 ANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSML 293
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 78/149 (52%), Gaps = 3/149 (2%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A+EI+ M G+ P + +M+DG CK + +A ++ M K P++V ++ ++
Sbjct: 164 EAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLI 223
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
GY KA + D+ IF +M GI N +YT L+ G C+ L A + M+ +G +
Sbjct: 224 NGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVA 283
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTL 305
PN TF ++ C ++ + +A ++ L
Sbjct: 284 PNYITFQSMLASLCSKKELRKAFAILEDL 312
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 86/153 (56%), Gaps = 3/153 (1%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A + KM+ET + + V A++D LCKDG A LF M +KG P+++ Y+ +
Sbjct: 58 ESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGM 117
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++ + ++ + DA+++ R M I+P+ +++ L+ L K ++ +A E +ML G
Sbjct: 118 IDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGI 177
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
P T+ +++GFCK+ + +AK + ++ K
Sbjct: 178 FPTTITYNSMIDGFCKQDRLNDAKRMLDSMASK 210
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 3/156 (1%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A +F +M + G+ P+ + M+D C+ G +A +L M E+ P++V ++A++
Sbjct: 95 AQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALIN 154
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
K K +A+ I+ M GI P +Y ++ G CK RL DA M SP
Sbjct: 155 ALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSP 214
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
+V TF L+ G+CK + ++ + +G N
Sbjct: 215 DVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVAN 250
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 72/147 (48%), Gaps = 1/147 (0%)
Query: 164 IFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAH 223
+ +M E G P +++GLCK G + AL L M E +VIY A+++ K
Sbjct: 32 LVDRMVEEGHQPYG-TIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDG 90
Query: 224 KADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFV 283
A+ +F +M GI P+ +Y+ ++ C+ R DA + +M+E +P+V TF
Sbjct: 91 HHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFS 150
Query: 284 DLVEGFCKEQGIEEAKGAIKTLIEKGF 310
L+ KE + EA+ ++ +G
Sbjct: 151 ALINALVKEGKVSEAEEIYGDMLRRGI 177
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 91/175 (52%), Gaps = 19/175 (10%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A +F++MK GL+ + M+D CK GL+++A K F MRE G P +V YTA+
Sbjct: 500 ELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTAL 559
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDA---FE-FC---- 267
+ Y KA K A +F M S G PN +Y+ L+ G CK +++ A FE C
Sbjct: 560 IHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKD 619
Query: 268 ---VEML-----EAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNE 314
V+M + PNV T+ L++GFCK +EEA+ + + +G N+
Sbjct: 620 VPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQ 674
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 82/158 (51%), Gaps = 3/158 (1%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E+A ++ M G PN + A++DGLCK G + EA ++ M E G + Y+++
Sbjct: 656 EEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSL 715
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++ Y K + D A ++ KM N +PN YT ++ GLCK + +A++ M E G
Sbjct: 716 IDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGC 775
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
PNV T+ +++GF IE ++ + KG A N
Sbjct: 776 QPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPN 813
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 3/135 (2%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A ++ KM E PN V M+DGLCK G EA KL +M EKG P +V YTA+++
Sbjct: 728 ASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMID 787
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G+ K + + +M S G++PN +Y VL+ CK L A EM +
Sbjct: 788 GFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPT 847
Query: 278 NVTTFVDLVEGFCKE 292
+ + ++EGF KE
Sbjct: 848 HTAGYRKVIEGFNKE 862
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 80/153 (52%), Gaps = 3/153 (1%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
D D FK+ + PN V A+LDG CK V+EA KL M +G P ++Y A++
Sbjct: 622 DVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALI 681
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+G K K D+A+ + +M +G ++Y+ L+ K R A + +MLE +
Sbjct: 682 DGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCA 741
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
PNV + ++++G CK +EA ++ + EKG
Sbjct: 742 PNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG 774
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 87/172 (50%), Gaps = 19/172 (11%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEI-------- 209
A+E+F+ M G +PN V A++DG CK G V++A ++F M +P++
Sbjct: 572 ANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYD 631
Query: 210 --------VIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQ 261
V Y A+++G+ K+H+ ++A+++ M G PN Y L+ GLCK +L
Sbjct: 632 DNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLD 691
Query: 262 DAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
+A E EM E G + T+ L++ + K + + A + ++E A N
Sbjct: 692 EAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPN 743
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 74/143 (51%), Gaps = 3/143 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A + ++M G IP+ +L+ LC ++ A LF M+ G + ++ YT +
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
V+ + KA + A++ F +M+ G +PN +YT L+ K ++ A E ML G
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584
Query: 276 SPNVTTFVDLVEGFCKEQGIEEA 298
PN+ T+ L++G CK +E+A
Sbjct: 585 LPNIVTYSALIDGHCKAGQVEKA 607
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 78/152 (51%), Gaps = 3/152 (1%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A++ + +M G++ N + + LC G ++A + M +G IP+ Y+ V+
Sbjct: 432 AEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLN 491
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
A K + A +F +M+ G+ + ++YT++V CK ++ A ++ EM E G +P
Sbjct: 492 YLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTP 551
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
NV T+ L+ + K + + A +T++ +G
Sbjct: 552 NVVTYTALIHAYLKAKKVSYANELFETMLSEG 583
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 67/157 (42%), Gaps = 9/157 (5%)
Query: 173 LIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAK 229
+P+ V ++ GLC+ L +EA+ MR +P +V Y+ ++ G + K
Sbjct: 298 FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCK 357
Query: 230 RIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGF 289
R+ M G P+ + LV C A++ +M++ GH P + L+
Sbjct: 358 RVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSI 417
Query: 290 CKEQG------IEEAKGAIKTLIEKGFAVNEKAVKDF 320
C ++ ++ A+ A ++ G +N+ V F
Sbjct: 418 CGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSF 454
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 73/162 (45%), Gaps = 9/162 (5%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKD------GLVQEALKLFGLMREKGTIPEIVI 211
A ++ KKM + G +P V ++ +C D L+ A K + M G + +
Sbjct: 391 AYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKIN 450
Query: 212 YTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEML 271
++ A K + A + R+M G P+ +Y+ ++ LC S+++ AF EM
Sbjct: 451 VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK 510
Query: 272 EAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
G +V T+ +V+ FCK IE+A+ + E G N
Sbjct: 511 RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPN 552
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 71/178 (39%), Gaps = 9/178 (5%)
Query: 154 QPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIV 210
+ ++ E+A + +M+ T +PN V +L G + ++ +M +G P
Sbjct: 314 EASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPK 373
Query: 211 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLC------KCSRLQDAF 264
I+ ++V Y + A ++ +KM G P Y +L+ +C C L A
Sbjct: 374 IFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAE 433
Query: 265 EFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
+ EML AG N C E+A I+ +I +GF + LN
Sbjct: 434 KAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLN 491
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 78/178 (43%), Gaps = 38/178 (21%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLV------------------------- 190
E E+ ++M G+ PN V ++D CK+G +
Sbjct: 796 ETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKV 855
Query: 191 -----QEALKLFGLMREKG---TIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISP 242
+E ++ GL+ E G T P + +Y +++ KA + + A R+ ++ + +
Sbjct: 856 IEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATL 915
Query: 243 NAFS--YTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
+S Y L++ LC ++++ AF+ EM + G P + +F L++G + I EA
Sbjct: 916 VDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 973
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 95/168 (56%), Gaps = 8/168 (4%)
Query: 154 QPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIV 210
Q +A +F ++ GL+P+ V ++D LCK+GL +A KL M KG +P I+
Sbjct: 702 QQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNII 761
Query: 211 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 270
IY ++V+GY K + +DA R+ + ++P+AF+ + +++G CK +++A E
Sbjct: 762 IYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEF 821
Query: 271 LEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVK 318
+ S + F+ L++GFC + +EEA+G ++ ++ V+E VK
Sbjct: 822 KDKNISADFFGFLFLIKGFCTKGRMEEARGLLREML-----VSESVVK 864
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 82/148 (55%), Gaps = 7/148 (4%)
Query: 166 KKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKA 222
++M E G+ + V+ ++DGL K+G V+EAL L G M ++G P ++ YTA++ G K
Sbjct: 266 REMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKM 325
Query: 223 HKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTF 282
K ++A +F ++ S GI + F Y L+ G+C+ L AF +M + G P++ T+
Sbjct: 326 GKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTY 385
Query: 283 VDLVEGFCKEQGIEEA----KGAIKTLI 306
++ G C + EA KG + +I
Sbjct: 386 NTVINGLCMAGRVSEADEVSKGVVGDVI 413
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 69/133 (51%), Gaps = 3/133 (2%)
Query: 169 KETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKA 225
K G+ N + ++++GLC+ G + EAL+LF + G +P V Y +++ K
Sbjct: 682 KSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLF 741
Query: 226 DDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDL 285
DA+++ M S G+ PN Y +V G CK + +DA + +P+ T +
Sbjct: 742 LDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSM 801
Query: 286 VEGFCKEQGIEEA 298
++G+CK+ +EEA
Sbjct: 802 IKGYCKKGDMEEA 814
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 81/161 (50%), Gaps = 4/161 (2%)
Query: 158 PEDADEIFKKMKETG-LIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 213
PE A F+ ++G L+PN V ++ LC+ G V E L + ++G + V Y+
Sbjct: 187 PELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYS 246
Query: 214 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 273
+ GY K DA R+M G++ + SY++L+ GL K +++A +M++
Sbjct: 247 NWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKE 306
Query: 274 GHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNE 314
G PN+ T+ ++ G CK +EEA ++ G V+E
Sbjct: 307 GVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDE 347
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 66/125 (52%)
Query: 174 IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFR 233
+ + +++GLCK+G + +AL L + +G + Y +++ G + +A R+F
Sbjct: 655 VIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFD 714
Query: 234 KMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQ 293
+++ G+ P+ +Y +L+ LCK DA + M+ G PN+ + +V+G+CK
Sbjct: 715 SLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLG 774
Query: 294 GIEEA 298
E+A
Sbjct: 775 QTEDA 779
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 92/191 (48%), Gaps = 5/191 (2%)
Query: 125 KFKLGFDNKAGNSSET--NQSEEATKSSNSNQPAMPEDADEIFKKMKETGLIPNAVAM-- 180
+ LGF A +S N T S Q ++ ++ +++++ G + V
Sbjct: 188 ELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSN 247
Query: 181 -LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 239
+ G K G + +AL M EKG ++V Y+ +++G +K ++A + KM G
Sbjct: 248 WIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEG 307
Query: 240 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAK 299
+ PN +YT +++GLCK +L++AF +L G + +V L++G C++ + A
Sbjct: 308 VEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAF 367
Query: 300 GAIKTLIEKGF 310
+ + ++G
Sbjct: 368 SMLGDMEQRGI 378
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 72/178 (40%), Gaps = 43/178 (24%)
Query: 159 EDADEIFKKMKETGLIPN---AVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E+A +F ++ G+ + V ++DG+C+ G + A + G M ++G P I+ Y V
Sbjct: 329 EEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTV 388
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQG---------------------- 253
+ G A + +A + S G+ + +Y+ L+
Sbjct: 389 INGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKI 443
Query: 254 ---LCKCSRLQDAF----------EFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
L C+ L AF M E +P+ T+ +++G+CK IEEA
Sbjct: 444 PMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEA 501
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 73/176 (41%), Gaps = 37/176 (21%)
Query: 172 GLIPNAVAMLDGLCKDGLVQEALKLFGLMREKG---TIPEIVI----------------- 211
G++ +A+ +L CK G + A++++ +MR KG T P ++
Sbjct: 587 GMLNDAILLL---CKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVV 643
Query: 212 --------------YTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKC 257
YT ++ G K A + +S G++ N +Y L+ GLC+
Sbjct: 644 NAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQ 703
Query: 258 SRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
L +A + G P+ T+ L++ CKE +A+ + +++ KG N
Sbjct: 704 GCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPN 759
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 83/143 (58%), Gaps = 3/143 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A+E++K+M G+ PN + ++DG C + EA + LM P+IV +T++
Sbjct: 315 QEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSL 374
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++GY + DD ++FR + G+ NA +Y++LVQG C+ +++ A E EM+ G
Sbjct: 375 IKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 434
Query: 276 SPNVTTFVDLVEGFCKEQGIEEA 298
P+V T+ L++G C +E+A
Sbjct: 435 LPDVMTYGILLDGLCDNGKLEKA 457
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 93/161 (57%), Gaps = 3/161 (1%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A+E+F++M G++P+ + +LDGLC +G +++AL++F +++ IV+YT ++E
Sbjct: 422 AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIE 481
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G K K +DA +F + G+ PN +YTV++ GLCK L +A +M E G++P
Sbjct: 482 GMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAP 541
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVK 318
N T+ L+ ++ + + I+ + GF+ + ++K
Sbjct: 542 NDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIK 582
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 80/149 (53%), Gaps = 3/149 (2%)
Query: 161 ADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A ++ +KM+E + + ++D LC+DG + A+ LF M KG +V Y ++V
Sbjct: 212 ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 271
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G KA K +D + + M S I PN ++ VL+ K +LQ+A E EM+ G SP
Sbjct: 272 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLI 306
N+ T+ L++G+C + + EA + ++
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNMLDLMV 360
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 86/159 (54%), Gaps = 3/159 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+D ++F+ + + GL+ NAV ++ G C+ G ++ A +LF M G +P+++ Y +
Sbjct: 385 DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGIL 444
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++G K + A IF +Q + + YT +++G+CK +++DA+ + G
Sbjct: 445 LDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV 504
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNE 314
PNV T+ ++ G CK+ + EA ++ + E G A N+
Sbjct: 505 KPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPND 543
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 82/156 (52%), Gaps = 3/156 (1%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A +FK+M+ G+ + V +++ GLCK G + L M + +P ++ + +++
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
+ K K +A ++++M + GISPN +Y L+ G C +RL +A M+ SP
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
++ TF L++G+C + +++ + + ++G N
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVAN 402
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 81/157 (51%), Gaps = 3/157 (1%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A + +M E G P+ V ++++G+C+ G AL L M E+ ++ Y+ ++
Sbjct: 176 EAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTII 235
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+ + D A +F++M++ GI + +Y LV+GLCK + D +M+
Sbjct: 236 DSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV 295
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
PNV TF L++ F KE ++EA K +I +G + N
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 77/153 (50%), Gaps = 3/153 (1%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
D + K M ++PN + +LD K+G +QEA +L+ M +G P I+ Y ++
Sbjct: 281 DGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLM 340
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+GY ++ +A + M N SP+ ++T L++G C R+ D + + + G
Sbjct: 341 DGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLV 400
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
N T+ LV+GFC+ I+ A+ + ++ G
Sbjct: 401 ANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 3/134 (2%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A + K+ + G P+ ++ GL +G V EA+ L M E G P++V Y ++V
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G ++ A + RKM+ + + F+Y+ ++ LC+ + A EM G
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261
Query: 278 NVTTFVDLVEGFCK 291
+V T+ LV G CK
Sbjct: 262 SVVTYNSLVRGLCK 275
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 66/127 (51%), Gaps = 3/127 (2%)
Query: 159 EDADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A EIF+ ++++ + I +++G+CK G V++A LF + KG P ++ YT +
Sbjct: 455 EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 514
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ G K +A + RKM+ +G +PN +Y L++ + L + + EM G
Sbjct: 515 ISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 574
Query: 276 SPNVTTF 282
S + ++
Sbjct: 575 SADASSI 581
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/118 (21%), Positives = 59/118 (50%)
Query: 192 EALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLV 251
+A+ LF M +P +V ++ + + + ++++ NGI+ N ++ +++
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 252 QGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
C+C + A+ ++++ G+ P+ TTF L++G E + EA + ++E G
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 65/148 (43%), Gaps = 3/148 (2%)
Query: 166 KKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKA 222
K+++ G+ N M++ C+ A + G + + G P+ + +++G
Sbjct: 112 KQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLE 171
Query: 223 HKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTF 282
K +A + +M NG P+ +Y +V G+C+ A + +M E +V T+
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 231
Query: 283 VDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
+++ C++ I+ A K + KG
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGI 259
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 90/153 (58%), Gaps = 3/153 (1%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A ++FK M++ G+ P+ +A ++DG K G++ KLF KG ++V++++ ++
Sbjct: 305 AFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTID 364
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
Y K+ A ++++M GISPN +YT+L++GLC+ R+ +AF ++L+ G P
Sbjct: 365 VYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEP 424
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
++ T+ L++GFCK + + +I+ G+
Sbjct: 425 SIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY 457
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 100/180 (55%), Gaps = 6/180 (3%)
Query: 159 EDADEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A+ IF+ +K T PN V + + LCK+ + A+++F +M EKG+ P V Y +
Sbjct: 624 DEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCL 683
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++ ++K+ + + ++F +MQ GISP+ SY++++ GLCK R+ +A + ++A
Sbjct: 684 MDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKL 743
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA---VNEKAVKDFLNKKKPFSPSVW 332
P+V + L+ G+CK + EA + ++ G + ++A+ ++ K S VW
Sbjct: 744 LPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSEYNPPKWLMSKGVW 803
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 74/141 (52%), Gaps = 3/141 (2%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A ++K+M G+ PN V ++ GLC+DG + EA ++G + ++G P IV Y+++++
Sbjct: 375 ASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLID 434
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G+ K ++ M G P+ Y VLV GL K + A F V+ML
Sbjct: 435 GFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRL 494
Query: 278 NVTTFVDLVEGFCKEQGIEEA 298
NV F L++G+C+ +EA
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEA 515
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 73/152 (48%), Gaps = 3/152 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
EDA + F + E + P+ V M+ G C + EA ++F L++ P V T +
Sbjct: 589 EDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTIL 648
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ K + D A R+F M G PNA +Y L+ K ++ +F+ EM E G
Sbjct: 649 IHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGI 708
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIE 307
SP++ ++ +++G CK ++EA I+
Sbjct: 709 SPSIVSYSIIIDGLCKRGRVDEATNIFHQAID 740
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 3/138 (2%)
Query: 190 VQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTV 249
+++A K F + E P+IV Y ++ GY + D+A+RIF ++ PN + T+
Sbjct: 588 IEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTI 647
Query: 250 LVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
L+ LCK + + A M E G PN T+ L++ F K IE + + + EKG
Sbjct: 648 LIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKG 707
Query: 310 FA---VNEKAVKDFLNKK 324
+ V+ + D L K+
Sbjct: 708 ISPSIVSYSIIIDGLCKR 725
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 76/178 (42%), Gaps = 14/178 (7%)
Query: 159 EDADEIFKKMKETGLIPNAVA---------MLDGLCKDGLVQEALKLFGLMREKGTIPEI 209
++A ++F+ M G+ P+ M D CK L+LF LM+ +I
Sbjct: 513 DEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADI 572
Query: 210 VIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVE 269
+ V+ K H+ +DA + F + + P+ +Y ++ G C RL +A E E
Sbjct: 573 AVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEA-ERIFE 631
Query: 270 MLEAG-HSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF---AVNEKAVKDFLNK 323
+L+ PN T L+ CK ++ A + EKG AV + D+ +K
Sbjct: 632 LLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSK 689
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 9/143 (6%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A ++ ++ + G+ P+ V +++DG CK G ++ L+ M + G P++VIY +V
Sbjct: 409 EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLV 468
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+G +K A R KM I N + L+ G C+ +R +A + M G
Sbjct: 469 DGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIK 528
Query: 277 PNVTTFVDLV------EGFCKEQ 293
P+V TF ++ + FCK
Sbjct: 529 PDVATFTTVMRVSIMEDAFCKHM 551
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 5/131 (3%)
Query: 165 FKKMKETGLIPNAVA----MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
F K+ G+ P+ V+ +LD L G V +AL L+ E+G IV V++G +
Sbjct: 204 FDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLS 263
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
+ + A R+ + G +PN ++ L+ G CK + AF+ M + G P++
Sbjct: 264 -VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLI 322
Query: 281 TFVDLVEGFCK 291
+ L++G+ K
Sbjct: 323 AYSTLIDGYFK 333
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 90/153 (58%), Gaps = 3/153 (1%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A ++FK M++ G+ P+ +A ++DG K G++ KLF KG ++V++++ ++
Sbjct: 305 AFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTID 364
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
Y K+ A ++++M GISPN +YT+L++GLC+ R+ +AF ++L+ G P
Sbjct: 365 VYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEP 424
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
++ T+ L++GFCK + + +I+ G+
Sbjct: 425 SIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY 457
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 100/180 (55%), Gaps = 6/180 (3%)
Query: 159 EDADEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A+ IF+ +K T PN V + + LCK+ + A+++F +M EKG+ P V Y +
Sbjct: 653 DEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCL 712
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++ ++K+ + + ++F +MQ GISP+ SY++++ GLCK R+ +A + ++A
Sbjct: 713 MDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKL 772
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA---VNEKAVKDFLNKKKPFSPSVW 332
P+V + L+ G+CK + EA + ++ G + ++A+ ++ K S VW
Sbjct: 773 LPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSEYNPPKWLMSKGVW 832
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 74/141 (52%), Gaps = 3/141 (2%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A ++K+M G+ PN V ++ GLC+DG + EA ++G + ++G P IV Y+++++
Sbjct: 375 ASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLID 434
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G+ K ++ M G P+ Y VLV GL K + A F V+ML
Sbjct: 435 GFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRL 494
Query: 278 NVTTFVDLVEGFCKEQGIEEA 298
NV F L++G+C+ +EA
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEA 515
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 8/172 (4%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E+A +F +M + GL P+A+A ++D CK L+LF LM+ +I + V
Sbjct: 548 EEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVV 607
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG- 274
+ K H+ +DA + F + + P+ +Y ++ G C RL +A E E+L+
Sbjct: 608 IHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEA-ERIFELLKVTP 666
Query: 275 HSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF---AVNEKAVKDFLNK 323
PN T L+ CK ++ A + EKG AV + D+ +K
Sbjct: 667 FGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSK 718
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 73/152 (48%), Gaps = 3/152 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
EDA + F + E + P+ V M+ G C + EA ++F L++ P V T +
Sbjct: 618 EDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTIL 677
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ K + D A R+F M G PNA +Y L+ K ++ +F+ EM E G
Sbjct: 678 IHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGI 737
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIE 307
SP++ ++ +++G CK ++EA I+
Sbjct: 738 SPSIVSYSIIIDGLCKRGRVDEATNIFHQAID 769
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 78/150 (52%), Gaps = 3/150 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVAMLDGL---CKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A ++F+ M G+ P+ + +G ++EAL LF M + G P+ + Y +
Sbjct: 513 DEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTL 572
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++ + K K ++F MQ N IS + V++ L KC R++DA +F ++E
Sbjct: 573 IDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKM 632
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTL 305
P++ T+ ++ G+C + ++EA+ + L
Sbjct: 633 EPDIVTYNTMICGYCSLRRLDEAERIFELL 662
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 71/133 (53%), Gaps = 3/133 (2%)
Query: 164 IFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
+++ M + G P+ V ++DGL K GL+ A++ M + +V++ ++++G+
Sbjct: 448 LYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC 507
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
+ ++ D+A ++FR M GI P+ ++T +++ RL++A M + G P+
Sbjct: 508 RLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDAL 567
Query: 281 TFVDLVEGFCKEQ 293
+ L++ FCK
Sbjct: 568 AYCTLIDAFCKHM 580
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 3/142 (2%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A ++ ++ + G+ P+ V +++DG CK G ++ L+ M + G P++VIY +V
Sbjct: 409 EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLV 468
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+G +K A R KM I N + L+ G C+ +R +A + M G
Sbjct: 469 DGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIK 528
Query: 277 PNVTTFVDLVEGFCKEQGIEEA 298
P+V TF ++ E +EEA
Sbjct: 529 PDVATFTTVMRVSIMEGRLEEA 550
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 5/131 (3%)
Query: 165 FKKMKETGLIPNAVA----MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
F K+ G+ P+ V+ +LD L G V +AL L+ E+G IV V++G +
Sbjct: 204 FDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLS 263
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
+ + A R+ + G +PN ++ L+ G CK + AF+ M + G P++
Sbjct: 264 -VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLI 322
Query: 281 TFVDLVEGFCK 291
+ L++G+ K
Sbjct: 323 AYSTLIDGYFK 333
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 80/142 (56%), Gaps = 3/142 (2%)
Query: 160 DADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA+E++ +M + PN ++++G C +G V EA ++F LM KG P++V YT+++
Sbjct: 265 DAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLI 324
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G+ K K DDA +IF +M G++ N +YT L+QG + + A E M+ G
Sbjct: 325 NGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVP 384
Query: 277 PNVTTFVDLVEGFCKEQGIEEA 298
PN+ T+ L+ C +++A
Sbjct: 385 PNIRTYNVLLHCLCYNGKVKKA 406
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 96/199 (48%), Gaps = 18/199 (9%)
Query: 118 LGDSFLDKF-KLGFDNKAGNSSETNQSEEATKSSNSNQPAM---PEDADEIFKKMKETGL 173
L SFL K KLGF + + T +S N + E+A + +M E G+
Sbjct: 125 LASSFLGKMMKLGF-----------EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173
Query: 174 IPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKR 230
P+ V ++D LCK+G V AL LF M G P++V+YT++V G + + DA
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233
Query: 231 IFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFC 290
+ R M I P+ ++ L+ K + DA E EM+ +PN+ T+ L+ GFC
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293
Query: 291 KEQGIEEAKGAIKTLIEKG 309
E ++EA+ + KG
Sbjct: 294 MEGCVDEARQMFYLMETKG 312
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 73/133 (54%), Gaps = 3/133 (2%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DAD + + M + + P+ + A++D K+G +A +L+ M P I YT+++
Sbjct: 230 DADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLI 289
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G+ D+A+++F M++ G P+ +YT L+ G CKC ++ DA + EM + G +
Sbjct: 290 NGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLT 349
Query: 277 PNVTTFVDLVEGF 289
N T+ L++GF
Sbjct: 350 GNTITYTTLIQGF 362
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 3/172 (1%)
Query: 154 QPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIV 210
Q + P A KM + G P+ V ++++G C ++EA+ + M E G P++V
Sbjct: 119 QSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVV 178
Query: 211 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 270
+YT +++ K + A +F +M++ GI P+ YT LV GLC R +DA M
Sbjct: 179 MYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGM 238
Query: 271 LEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
+ P+V TF L++ F KE +A+ +I A N +N
Sbjct: 239 TKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN 290
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 60/118 (50%)
Query: 192 EALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLV 251
EAL LF M E +P I+ +T ++ K K D + +Q G+S + ++ +L+
Sbjct: 55 EALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLM 114
Query: 252 QGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
C+ S+ A F +M++ G P++ TF L+ GFC +EEA + ++E G
Sbjct: 115 NCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG 172
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 6/162 (3%)
Query: 154 QPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREK---GTIP 207
Q P A E+F M G+ PN +L LC +G V++AL +F M+++ G P
Sbjct: 364 QVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAP 423
Query: 208 EIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFC 267
I Y ++ G K + A +F M+ + +YT+++QG+CK ++++A
Sbjct: 424 NIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLF 483
Query: 268 VEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
+ G PNV T+ ++ G +E EA + + E G
Sbjct: 484 CSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 85/192 (44%), Gaps = 41/192 (21%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A ++F M+ G P+ VA +++G CK V +A+K+F M +KG + YT +
Sbjct: 299 DEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTL 358
Query: 216 VEGYTKAHKADDAKRIFRKMQS-------------------------------------- 237
++G+ + K + A+ +F M S
Sbjct: 359 IQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREM 418
Query: 238 NGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEE 297
+G++PN ++Y VL+ GLC +L+ A +M + + T+ +++G CK ++
Sbjct: 419 DGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKN 478
Query: 298 AKGAIKTLIEKG 309
A +L KG
Sbjct: 479 AVNLFCSLPSKG 490
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 60/129 (46%)
Query: 180 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 239
+++ C+ A G M + G P+IV +T+++ G+ ++ ++A + +M G
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG 172
Query: 240 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAK 299
I P+ YT ++ LCK + A +M G P+V + LV G C +A
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232
Query: 300 GAIKTLIEK 308
++ + ++
Sbjct: 233 SLLRGMTKR 241
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 81/149 (54%), Gaps = 3/149 (2%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A+EI+K+M + P + +M+DG CK V +A ++ M KG P++V ++ ++
Sbjct: 98 EAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLI 157
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
GY KA + D+ IF +M GI N +YT L+ G C+ L A + EM+ G +
Sbjct: 158 NGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVA 217
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTL 305
P+ TF ++ G C ++ + +A ++ L
Sbjct: 218 PDYITFHCMLAGLCSKKELRKAFAILEDL 246
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 81/155 (52%), Gaps = 3/155 (1%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DAD++ + M E + P+ V A+++ K+ V EA +++ M P + Y +++
Sbjct: 63 DADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMI 122
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+G+ K + DDAKR+ M S G SP+ +++ L+ G CK R+ + E EM G
Sbjct: 123 DGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIV 182
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
N T+ L+ GFC+ ++ A+ + +I G A
Sbjct: 183 ANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVA 217
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 78/157 (49%), Gaps = 3/157 (1%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A +F +M E G+ PN + M+D C G +A +L M EK P+IV ++A++
Sbjct: 28 NAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALI 87
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+ K K +A+ I+++M I P +Y ++ G CK R+ DA M G S
Sbjct: 88 NAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCS 147
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
P+V TF L+ G+CK + ++ + +G N
Sbjct: 148 PDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVAN 184
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 72/133 (54%)
Query: 177 AVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQ 236
+ A++D LCKDG A LF M EKG P ++ Y +++ + + + DA ++ R M
Sbjct: 13 STAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMI 72
Query: 237 SNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIE 296
I+P+ +++ L+ K ++ +A E EML P T+ +++GFCK+ ++
Sbjct: 73 EKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVD 132
Query: 297 EAKGAIKTLIEKG 309
+AK + ++ KG
Sbjct: 133 DAKRMLDSMASKG 145
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%)
Query: 207 PEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEF 266
++VI TA+V+ K +A+ +F +M GI PN +Y ++ C R DA +
Sbjct: 8 ADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQL 67
Query: 267 CVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLI 306
M+E +P++ TF L+ F KE+ + EA+ K ++
Sbjct: 68 LRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEML 107
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 85/152 (55%), Gaps = 3/152 (1%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A E+ M G +P+ ++ +L+ LC+ ++EA KL M+ KG P++V Y ++
Sbjct: 244 AMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMIL 303
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G+ + +A DA+++ M SNG SPN+ SY L+ GLC + ++ EM+ G SP
Sbjct: 304 GFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSP 363
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
+ + LV+GFC +EEA ++ +++ G
Sbjct: 364 HFSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 395
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 82/154 (53%), Gaps = 3/154 (1%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A ++F KM E ++P+ + ++ G C+ G V A++L M KG +P+ + YT ++
Sbjct: 209 AYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLN 268
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
+ + +A ++ +M+ G +P+ Y ++ G C+ R DA + +ML G SP
Sbjct: 269 SLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSP 328
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
N ++ L+ G C + +E K ++ +I KGF+
Sbjct: 329 NSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFS 362
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 88/166 (53%), Gaps = 3/166 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+ A E+FK + G++PN + ++ C + + A +LFG M E+ +P++ Y +
Sbjct: 172 QKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKIL 231
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++G+ + + + A + M + G P+ SYT L+ LC+ ++L++A++ M G
Sbjct: 232 IQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGC 291
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFL 321
+P++ + ++ GFC+E +A+ + ++ G + N + + +
Sbjct: 292 NPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLI 337
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 4/157 (2%)
Query: 157 MPEDADEIFKKMKETGLIP---NAVAMLDGLCKD-GLVQEALKLFGLMREKGTIPEIVIY 212
+PE F KM E P + +LD L G +Q+A +LF R G +P Y
Sbjct: 134 LPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSY 193
Query: 213 TAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 272
+++ + A ++F KM + P+ SY +L+QG C+ ++ A E +ML
Sbjct: 194 NLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLN 253
Query: 273 AGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
G P+ ++ L+ C++ + EA + + KG
Sbjct: 254 KGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKG 290
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 50/95 (52%)
Query: 228 AKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVE 287
A +F+ + +G+ PN SY +L+Q C L A++ +MLE P+V ++ L++
Sbjct: 174 AFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQ 233
Query: 288 GFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
GFC++ + A + ++ KGF + + LN
Sbjct: 234 GFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLN 268
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 75/136 (55%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
++L G C+ G + EA + M E G P+IV YT ++ GY A K DA + R M+
Sbjct: 257 SLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRR 316
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
G PNA YTVL+Q LCK R+++A + VEM +V T+ LV GFCK I++
Sbjct: 317 GFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKC 376
Query: 299 KGAIKTLIEKGFAVNE 314
+ +I+KG +E
Sbjct: 377 YIVLDDMIKKGLMPSE 392
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 95/229 (41%), Gaps = 45/229 (19%)
Query: 160 DADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA ++ + M+ G PNA ++ LCK ++EA+K+F M ++V YTA+V
Sbjct: 305 DAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALV 364
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYT---------------------------- 248
G+ K K D + M G+ P+ +Y
Sbjct: 365 SGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYH 424
Query: 249 -------VLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGA 301
V+++ CK +++A EM E G SP V TFV ++ G + + EA
Sbjct: 425 PDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDH 484
Query: 302 IKTLIEKG-FAVNEKAVKDFL------NKKKPFSPSVWEAIFGKKAPQM 343
K ++ +G F+V++ L +KK + VW I K A ++
Sbjct: 485 FKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACEL 533
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 68/142 (47%), Gaps = 3/142 (2%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A + +M E G P+ V +L G G + +A L MR +G P YT ++
Sbjct: 270 EAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLI 329
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+ K + ++A ++F +M+ + +YT LV G CK ++ + +M++ G
Sbjct: 330 QALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLM 389
Query: 277 PNVTTFVDLVEGFCKEQGIEEA 298
P+ T++ ++ K++ EE
Sbjct: 390 PSELTYMHIMVAHEKKESFEEC 411
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 6/137 (4%)
Query: 159 EDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKG--TIPEIVIYT 213
++A ++ +M+E GL P V M++GL G + EA F M +G ++ +
Sbjct: 444 KEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLK 503
Query: 214 AVVEGYTKAHKADDAKRIFRKMQSNGISP-NAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 272
++ K K + AK ++ + S G N S+T+ + L ++A +C+EM+E
Sbjct: 504 LLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTIWIHALFSKGYEKEACSYCIEMIE 563
Query: 273 AGHSPNVTTFVDLVEGF 289
P TF L++G
Sbjct: 564 MDFMPQPDTFAKLMKGL 580
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 79/142 (55%), Gaps = 3/142 (2%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A+E +++M L P+ V ++ GLC + EA ++FG M KG P++V Y+ ++
Sbjct: 274 EAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILI 333
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
GY K+ K + ++F +M G+ N +YT+L+QG C+ +L A E M+ G
Sbjct: 334 NGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVH 393
Query: 277 PNVTTFVDLVEGFCKEQGIEEA 298
PN+ T+ L+ G C IE+A
Sbjct: 394 PNIITYNVLLHGLCDNGKIEKA 415
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 80/143 (55%), Gaps = 3/143 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A+E+F M G P+ V +++G CK V+ +KLF M ++G + V YT +
Sbjct: 308 DEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTIL 367
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++GY +A K + A+ IFR+M G+ PN +Y VL+ GLC +++ A +M + G
Sbjct: 368 IQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGM 427
Query: 276 SPNVTTFVDLVEGFCKEQGIEEA 298
++ T+ ++ G CK + +A
Sbjct: 428 DADIVTYNIIIRGMCKAGEVADA 450
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 76/153 (49%), Gaps = 3/153 (1%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA +F +M G PN V ++DGLCK V AL L M + G P++V Y +++
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G + + DA R+ M I P+ F++ L+ K R+ +A EF EM+
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
P++ T+ L+ G C ++EA+ ++ KG
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG 321
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 95/198 (47%), Gaps = 4/198 (2%)
Query: 119 GDSFLDKFKLGFDNKAGNSSETNQSEEATKSSNSNQPAMPEDADEIFKKMKETGLIPNAV 178
GD D + FD G + N T + ++A ++ +M++ G+ P+ V
Sbjct: 164 GDRVYDALYM-FDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVV 222
Query: 179 ---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKM 235
+++ GLC G +A ++ M ++ P++ + A+++ K + +A+ + +M
Sbjct: 223 TYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEM 282
Query: 236 QSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGI 295
+ P+ +Y++L+ GLC SRL +A E M+ G P+V T+ L+ G+CK + +
Sbjct: 283 IRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKV 342
Query: 296 EEAKGAIKTLIEKGFAVN 313
E + ++G N
Sbjct: 343 EHGMKLFCEMSQRGVVRN 360
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 76/147 (51%), Gaps = 3/147 (2%)
Query: 167 KMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAH 223
KM + G P+ V ++L+G C+ V +AL +F M G P +VIY +++G K+
Sbjct: 141 KMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSK 200
Query: 224 KADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFV 283
+ D+A + +M+ +GI P+ +Y L+ GLC R DA M + P+V TF
Sbjct: 201 QVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFN 260
Query: 284 DLVEGFCKEQGIEEAKGAIKTLIEKGF 310
L++ KE + EA+ + +I +
Sbjct: 261 ALIDACVKEGRVSEAEEFYEEMIRRSL 287
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 77/153 (50%), Gaps = 3/153 (1%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA + M + + P+ A++D K+G V EA + + M + P+IV Y+ ++
Sbjct: 239 DATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLI 298
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G + D+A+ +F M S G P+ +Y++L+ G CK +++ + EM + G
Sbjct: 299 YGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV 358
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
N T+ L++G+C+ + A+ + ++ G
Sbjct: 359 RNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCG 391
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 69/139 (49%), Gaps = 3/139 (2%)
Query: 190 VQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTV 249
+ ++L LF M + +P I ++ ++ +K K D ++ +MQ GI N + +
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 250 LVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
L+ C+CS+L A F +M++ GH P++ TF L+ GFC+ + +A ++ G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 310 F---AVNEKAVKDFLNKKK 325
+ V + D L K K
Sbjct: 182 YKPNVVIYNTIIDGLCKSK 200
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 71/148 (47%), Gaps = 3/148 (2%)
Query: 164 IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
++++M+ G+ N +L+ C+ + AL G M + G P IV + +++ G+
Sbjct: 103 LWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFC 162
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
+ + DA +F +M G PN Y ++ GLCK ++ +A + M + G P+V
Sbjct: 163 RGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVV 222
Query: 281 TFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
T+ L+ G C +A + + ++
Sbjct: 223 TYNSLISGLCSSGRWSDATRMVSCMTKR 250
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 80/143 (55%), Gaps = 3/143 (2%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E+A+++F+ MK+ G++PN AM+DG CK G V++A L+ + +P +V++ +
Sbjct: 251 EEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTL 310
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
V+G+ KA + A+ +F M G+ PN + Y L+ G CK + +A EM
Sbjct: 311 VDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNL 370
Query: 276 SPNVTTFVDLVEGFCKEQGIEEA 298
SP+V T+ L+ G C E + EA
Sbjct: 371 SPDVFTYTILINGLCIEDQVAEA 393
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 79/154 (51%), Gaps = 3/154 (1%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A +F M + G+ PN ++ G CK G + EA+ L M P++ YT ++
Sbjct: 323 ARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILIN 382
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G + +A R+F+KM++ I P++ +Y L+ G CK ++ A + C EM +G P
Sbjct: 383 GLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEP 442
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
N+ TF L++G+C + I+ A G + KG
Sbjct: 443 NIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIV 476
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 77/145 (53%), Gaps = 5/145 (3%)
Query: 162 DEIFKKMKETGLIPNA----VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
+++ +M G+ PN + +LD LC+D ++EA K+F LM++ G +P + Y+A+++
Sbjct: 219 EKLLDEMTSLGIKPNVYIYTIYILD-LCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMID 277
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
GY K A +++++ + PN + LV G CK L A V M++ G P
Sbjct: 278 GYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDP 337
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAI 302
N+ + L+ G CK + EA G +
Sbjct: 338 NLYVYNCLIHGHCKSGNMLEAVGLL 362
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 76/148 (51%), Gaps = 3/148 (2%)
Query: 165 FKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTK 221
++ M GL+P+ + K GL + KL M G P + IYT + +
Sbjct: 187 YQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCR 246
Query: 222 AHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTT 281
+K ++A+++F M+ +G+ PN ++Y+ ++ G CK ++ A+ E+L A PNV
Sbjct: 247 DNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVV 306
Query: 282 FVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
F LV+GFCK + + A+ +++ G
Sbjct: 307 FGTLVDGFCKARELVTARSLFVHMVKFG 334
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 75/136 (55%), Gaps = 3/136 (2%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A+ +F+KMK + P++ +++ G CK+ +++AL L M G P I+ ++ ++
Sbjct: 392 EANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLI 451
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+GY A ++ +M GI P+ +YT L+ K + +++A +MLEAG
Sbjct: 452 DGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIH 511
Query: 277 PNVTTFVDLVEGFCKE 292
PN TF LV+GF KE
Sbjct: 512 PNDHTFACLVDGFWKE 527
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 78/158 (49%), Gaps = 3/158 (1%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A + +M+ L P+ +++GLC + V EA +LF M+ + P Y +++
Sbjct: 357 EAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLI 416
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
GY K + + A + +M ++G+ PN +++ L+ G C ++ A EM G
Sbjct: 417 HGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIV 476
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNE 314
P+V T+ L++ KE ++EA ++E G N+
Sbjct: 477 PDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPND 514
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 3/143 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A ++ +M +G+ PN + ++DG C ++ A+ L+ M KG +P++V YTA+
Sbjct: 426 EQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTAL 485
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++ + K +A R++ M GI PN ++ LV G K RL A +F E +
Sbjct: 486 IDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRS 545
Query: 276 SPNVTTFVDLVEGFCKEQGIEEA 298
N F L+EG C+ I A
Sbjct: 546 CWNHVGFTCLIEGLCQNGYILRA 568
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 116/253 (45%), Gaps = 13/253 (5%)
Query: 65 EPIPSTKPVNQRTREYNRGSRSRFDGNRDEVEKTTMKSDLGFQGRNRPDVANQLGDSFLD 124
E I + + + + SRSR + D + + L G ++ +A L S ++
Sbjct: 46 EAILKCRSAEEAFKLFETSSRSRVSKSNDLQSFSAVIHVL--TGAHKYTLARCLIKSLIE 103
Query: 125 KFKL-----GFDNKAGNSSETNQSEEATKSSNSN------QPAMPEDADEIFKKMKETGL 173
+ K ++ N+ E QS + + S + + E+A + ++MK +
Sbjct: 104 RLKRHSEPSNMSHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSREMKCSPD 163
Query: 174 IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFR 233
+++L+GL + + LM +G +P++ IY + + K +++
Sbjct: 164 SKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLD 223
Query: 234 KMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQ 293
+M S GI PN + YT+ + LC+ +++++A + M + G PN+ T+ +++G+CK
Sbjct: 224 EMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTG 283
Query: 294 GIEEAKGAIKTLI 306
+ +A G K ++
Sbjct: 284 NVRQAYGLYKEIL 296
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 62/124 (50%), Gaps = 3/124 (2%)
Query: 159 EDADEIFKKMKETGLIPN---AVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A ++ M E G+ PN ++DG K+G + A+ + ++ + V +T +
Sbjct: 496 KEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCL 555
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+EG + A R F M+S GI+P+ SY +++G + R+ D +M++ G
Sbjct: 556 IEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGI 615
Query: 276 SPNV 279
PN+
Sbjct: 616 LPNL 619
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 85/152 (55%), Gaps = 3/152 (1%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A E+F++M+ G P+ ++D LC G + EAL + M G ++ Y +++
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLID 478
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G+ KA+K +A+ IF +M+ +G+S N+ +Y L+ GLCK R++DA + +M+ G P
Sbjct: 479 GFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKP 538
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
+ T+ L+ FC+ I++A ++ + G
Sbjct: 539 DKYTYNSLLTHFCRGGDIKKAADIVQAMTSNG 570
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 77/144 (53%), Gaps = 3/144 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A E+ +M PN V ++ LCK+ V+EA +L ++ KG +P++ + ++
Sbjct: 347 KEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSL 406
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++G A +F +M+S G P+ F+Y +L+ LC +L +A +M +G
Sbjct: 407 IQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGC 466
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAK 299
+ +V T+ L++GFCK EA+
Sbjct: 467 ARSVITYNTLIDGFCKANKTREAE 490
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 83/154 (53%), Gaps = 3/154 (1%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E+A E+ + + G++P+ +++ GLC + A++LF MR KG P+ Y +
Sbjct: 382 EEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNML 441
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++ K D+A + ++M+ +G + + +Y L+ G CK ++ ++A E EM G
Sbjct: 442 IDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGV 501
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
S N T+ L++G CK + +E+A + +I +G
Sbjct: 502 SRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG 535
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 74/136 (54%), Gaps = 4/136 (2%)
Query: 159 EDADEIFKKMK-ETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 214
EDA ++M + G P+ +++GLCK G V+ A+++ +M ++G P++ Y +
Sbjct: 276 EDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNS 335
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
V+ G K + +A + +M + SPN +Y L+ LCK +++++A E + G
Sbjct: 336 VISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 395
Query: 275 HSPNVTTFVDLVEGFC 290
P+V TF L++G C
Sbjct: 396 ILPDVCTFNSLIQGLC 411
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 3/154 (1%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A EI M + G P+ +++ GLCK G V+EA+++ M + P V Y ++
Sbjct: 314 AIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIS 373
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
K ++ ++A + R + S GI P+ ++ L+QGLC + A E EM G P
Sbjct: 374 TLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEP 433
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
+ T+ L++ C + ++EA +K + G A
Sbjct: 434 DEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCA 467
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 78/158 (49%), Gaps = 5/158 (3%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
EDA ++ +M G P+ ++L C+ G +++A + M G P+IV Y +
Sbjct: 522 EDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTL 581
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ G KA + + A ++ R +Q GI+ +Y ++QGL + + +A EMLE
Sbjct: 582 ISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNE 641
Query: 276 S-PNVTTFVDLVEGFCKEQG-IEEAKGAIKTLIEKGFA 311
+ P+ ++ + G C G I EA + L+EKGF
Sbjct: 642 APPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFV 679
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 74/148 (50%), Gaps = 4/148 (2%)
Query: 167 KMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAH 223
KM G+ P+ ++ LC+ ++ A+ + M G +P+ +T V++GY +
Sbjct: 179 KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEG 238
Query: 224 KADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEML-EAGHSPNVTTF 282
D A RI +M G S + S V+V G CK R++DA F EM + G P+ TF
Sbjct: 239 DLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTF 298
Query: 283 VDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
LV G CK ++ A + ++++G+
Sbjct: 299 NTLVNGLCKAGHVKHAIEIMDVMLQEGY 326
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 5/134 (3%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A +I + M G P+ V ++ GLCK G V+ A KL ++ KG Y V++
Sbjct: 559 AADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQ 618
Query: 218 GYTKAHKADDAKRIFRKM-QSNGISPNAFSYTVLVQGLCKCSR-LQDAFEFCVEMLEAGH 275
G + K +A +FR+M + N P+A SY ++ +GLC +++A +F VE+LE G
Sbjct: 619 GLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGF 678
Query: 276 SPNVTTFVDLVEGF 289
P ++ L EG
Sbjct: 679 VPEFSSLYMLAEGL 692
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 86/168 (51%), Gaps = 4/168 (2%)
Query: 159 EDADEIFKKMKET-GLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 214
+DA + M + G++P+ +++ G K+GLV AL++ MR KG P + YT
Sbjct: 370 DDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTI 429
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
+V+G+ K K D+A + +M ++G+ PN + L+ CK R+ +A E EM G
Sbjct: 430 LVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 489
Query: 275 HSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
P+V TF L+ G C+ I+ A ++ +I +G N +N
Sbjct: 490 CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLIN 537
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 3/157 (1%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A E+ M+ G PN + ++DG CK G + EA + M G P V + ++
Sbjct: 408 ALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLIS 467
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
+ K H+ +A IFR+M G P+ +++ L+ GLC+ ++ A +M+ G
Sbjct: 468 AFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVA 527
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNE 314
N T+ L+ F + I+EA+ + ++ +G ++E
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDE 564
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 82/150 (54%), Gaps = 3/150 (2%)
Query: 164 IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
+ + M G++ N V +++ + G ++EA KL M +G+ + + Y ++++G
Sbjct: 516 LLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLC 575
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
+A + D A+ +F KM +G +P+ S +L+ GLC+ +++A EF EM+ G +P++
Sbjct: 576 RAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIV 635
Query: 281 TFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
TF L+ G C+ IE+ + L +G
Sbjct: 636 TFNSLINGLCRAGRIEDGLTMFRKLQAEGI 665
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 82/144 (56%), Gaps = 3/144 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+ A +F+KM G P+ ++ +++GLC+ G+V+EA++ M +G+ P+IV + ++
Sbjct: 581 DKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSL 640
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ G +A + +D +FRK+Q+ GI P+ ++ L+ LCK + DA E +E G
Sbjct: 641 INGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGF 700
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAK 299
PN T+ L++ ++ ++ +
Sbjct: 701 VPNHRTWSILLQSIIPQETLDRRR 724
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 80/189 (42%), Gaps = 43/189 (22%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A ++ +M G P+ + +++GLCK G V A LF + + PEIVI+ ++
Sbjct: 305 EAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLI 360
Query: 217 EGYTKAHKADDAK------------------------------------RIFRKMQSNGI 240
G+ + DDAK + M++ G
Sbjct: 361 HGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGC 420
Query: 241 SPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKG 300
PN +SYT+LV G CK ++ +A+ EM G PN F L+ FCKE I EA
Sbjct: 421 KPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVE 480
Query: 301 AIKTLIEKG 309
+ + KG
Sbjct: 481 IFREMPRKG 489
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 63/130 (48%)
Query: 193 ALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQ 252
A +F M + P + + V++ + ++ D A + R M +G PN+ Y L+
Sbjct: 201 AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIH 260
Query: 253 GLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAV 312
L KC+R+ +A + EM G P+ TF D++ G CK I EA + ++ +GFA
Sbjct: 261 SLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAP 320
Query: 313 NEKAVKDFLN 322
++ +N
Sbjct: 321 DDITYGYLMN 330
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 82/164 (50%), Gaps = 4/164 (2%)
Query: 149 SSNSNQPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGT 205
S+ + +PE A EIF++M G P+ +++ GLC+ ++ AL L M +G
Sbjct: 467 SAFCKEHRIPE-AVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV 525
Query: 206 IPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFE 265
+ V Y ++ + + + +A+++ +M G + +Y L++GLC+ + A
Sbjct: 526 VANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARS 585
Query: 266 FCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
+ML GH+P+ + L+ G C+ +EEA K ++ +G
Sbjct: 586 LFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRG 629
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 81/167 (48%), Gaps = 3/167 (1%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A + +M GL PN V ++ CK+ + EA+++F M KG P++ + ++
Sbjct: 441 DEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSL 500
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ G + + A + R M S G+ N +Y L+ + +++A + EM+ G
Sbjct: 501 ISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGS 560
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
+ T+ L++G C+ +++A+ + ++ G A + + +N
Sbjct: 561 PLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILIN 607
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 2/159 (1%)
Query: 141 NQSEEATKSSNSNQPAMPEDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLM 200
N E S N ++ A D + +K+ T L V M C + AL L M
Sbjct: 186 NVVLEILVSGNCHKVAANVFYDMLSRKIPPT-LFTFGVVM-KAFCAVNEIDSALSLLRDM 243
Query: 201 REKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRL 260
+ G +P VIY ++ +K ++ ++A ++ +M G P+A ++ ++ GLCK R+
Sbjct: 244 TKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRI 303
Query: 261 QDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAK 299
+A + ML G +P+ T+ L+ G CK ++ AK
Sbjct: 304 NEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAK 342
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 67/148 (45%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
+++ GLC+ G V +A LF M G P + ++ G ++ ++A ++M
Sbjct: 569 SLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLR 628
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
G +P+ ++ L+ GLC+ R++D ++ G P+ TF L+ CK + +A
Sbjct: 629 GSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA 688
Query: 299 KGAIKTLIEKGFAVNEKAVKDFLNKKKP 326
+ IE GF N + L P
Sbjct: 689 CLLLDEGIEDGFVPNHRTWSILLQSIIP 716
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 84/158 (53%), Gaps = 3/158 (1%)
Query: 157 MPEDADEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 213
M +AD++F +M E L P++ + +DG CK G +Q A++LF M+EK ++V Y
Sbjct: 460 MLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYN 519
Query: 214 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 273
+++G+ K D AK I+ M S I P SY++LV LC L +AF EM+
Sbjct: 520 TLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISK 579
Query: 274 GHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
P V +++G+C+ + + ++ +I +GF
Sbjct: 580 NIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFV 617
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 83/155 (53%), Gaps = 3/155 (1%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A E+F +M +GL P++ ++L CK G V E K+F MR + +P++V ++++
Sbjct: 322 ERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSM 381
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ +T++ D A F ++ G+ P+ YT+L+QG C+ + A EML+ G
Sbjct: 382 MSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGC 441
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
+ +V T+ ++ G CK + + EA + E+
Sbjct: 442 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERAL 476
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 85/165 (51%), Gaps = 9/165 (5%)
Query: 147 TKSSNSNQPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREK 203
T+S N ++ M F +KE GLIP+ V ++ G C+ G++ A+ L M ++
Sbjct: 386 TRSGNLDKALM------YFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQ 439
Query: 204 GTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDA 263
G ++V Y ++ G K +A ++F +M + P++++ T+L+ G CK LQ+A
Sbjct: 440 GCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNA 499
Query: 264 FEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
E +M E +V T+ L++GF K I+ AK ++ K
Sbjct: 500 MELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSK 544
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 76/144 (52%), Gaps = 3/144 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A +++++ +G+ N M++ LCKDG +++ ++EKG P+IV Y +
Sbjct: 217 ELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTL 276
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ Y+ ++A + M G SP ++Y ++ GLCK + + A E EML +G
Sbjct: 277 ISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGL 336
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAK 299
SP+ TT+ L+ CK+ + E +
Sbjct: 337 SPDSTTYRSLLMEACKKGDVVETE 360
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 77/152 (50%), Gaps = 3/152 (1%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+ +++F M+ ++P+ V +M+ + G + +AL F ++E G IP+ VIYT ++
Sbjct: 358 ETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILI 417
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+GY + A + +M G + + +Y ++ GLCK L +A + EM E
Sbjct: 418 QGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALF 477
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
P+ T L++G CK ++ A + + EK
Sbjct: 478 PDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 82/154 (53%), Gaps = 4/154 (2%)
Query: 164 IFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAH 223
I K +K T +I N+ M+ G C+ G + M +G +P+ + Y ++ G+ +
Sbjct: 577 ISKNIKPTVMICNS--MIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREE 634
Query: 224 KADDAKRIFRKMQ--SNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTT 281
A + +KM+ G+ P+ F+Y ++ G C+ +++++A +M+E G +P+ +T
Sbjct: 635 NMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRST 694
Query: 282 FVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEK 315
+ ++ GF + + EA ++++GF+ ++K
Sbjct: 695 YTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDDK 728
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 67/124 (54%), Gaps = 5/124 (4%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREK--GTIPEIVIYTA 214
D + +KM G +P+ ++ ++ G ++ + +A L M E+ G +P++ Y +
Sbjct: 603 DGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNS 662
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
++ G+ + ++ +A+ + RKM G++P+ +YT ++ G L +AF EML+ G
Sbjct: 663 ILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRG 722
Query: 275 HSPN 278
SP+
Sbjct: 723 FSPD 726
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 80/193 (41%), Gaps = 38/193 (19%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E +++E G+ P+ V ++ GL++EA +L M KG P + Y V
Sbjct: 252 EKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTV 311
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCK------------------- 256
+ G K K + AK +F +M +G+SP++ +Y L+ CK
Sbjct: 312 INGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDV 371
Query: 257 -----C-----------SRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKG 300
C L A + + EAG P+ + L++G+C++ I A
Sbjct: 372 VPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMN 431
Query: 301 AIKTLIEKGFAVN 313
++++G A++
Sbjct: 432 LRNEMLQQGCAMD 444
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 66/165 (40%), Gaps = 3/165 (1%)
Query: 160 DADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A E F ++ G I A++ L + G V+ A ++ + G + +V
Sbjct: 183 EAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMV 242
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
K K + ++Q G+ P+ +Y L+ +++AFE M G S
Sbjct: 243 NALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFS 302
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFL 321
P V T+ ++ G CK E AK ++ G + + + L
Sbjct: 303 PGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 62/122 (50%)
Query: 190 VQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTV 249
++EA + F L+R KG I A++ + + A +++++ +G+ N ++ +
Sbjct: 181 LREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNI 240
Query: 250 LVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
+V LCK +++ F ++ E G P++ T+ L+ + + +EEA + + KG
Sbjct: 241 MVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKG 300
Query: 310 FA 311
F+
Sbjct: 301 FS 302
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 83/154 (53%), Gaps = 3/154 (1%)
Query: 159 EDADEIFKKMKETGLIPN---AVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+ A + M + GL+P+ +M+D LCK V+EA LF + +KG P +V+YTA+
Sbjct: 479 DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 538
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++GY KA K D+A + KM S PN+ ++ L+ GLC +L++A +M++ G
Sbjct: 539 IDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGL 598
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
P V+T L+ K+ + A + ++ G
Sbjct: 599 QPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG 632
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 86/166 (51%), Gaps = 3/166 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+ A ++F +M G N VA ++ GLC + EA+ LF M++ P + YT +
Sbjct: 270 DSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVL 329
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++ + + +A + ++M+ GI PN +YTVL+ LC + + A E +MLE G
Sbjct: 330 IKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGL 389
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFL 321
PNV T+ L+ G+CK IE+A ++ + + + N + + +
Sbjct: 390 MPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELI 435
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 83/155 (53%), Gaps = 4/155 (2%)
Query: 160 DADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A + K+M+ETG+ PN ++D LC ++A +L G M EKG +P ++ Y A++
Sbjct: 341 EALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALI 400
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
GY K +DA + M+S +SPN +Y L++G CK S + A +MLE
Sbjct: 401 NGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVL 459
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
P+V T+ L++G C+ + A + + ++G
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 494
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 93/187 (49%), Gaps = 37/187 (19%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMR-------------- 201
E A E+ +M E GL+PN + A+++G CK G++++A+ + LM
Sbjct: 375 EKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNEL 434
Query: 202 --------------------EKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGIS 241
E+ +P++V Y ++++G ++ D A R+ M G+
Sbjct: 435 IKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 494
Query: 242 PNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGA 301
P+ ++YT ++ LCK R+++A + + + G +PNV + L++G+CK ++EA
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLM 554
Query: 302 IKTLIEK 308
++ ++ K
Sbjct: 555 LEKMLSK 561
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 81/150 (54%), Gaps = 3/150 (2%)
Query: 164 IFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
+ KM E ++P+ V +++DG C+ G A +L LM ++G +P+ YT++++
Sbjct: 449 VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLC 508
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
K+ + ++A +F ++ G++PN YT L+ G CK ++ +A +ML PN
Sbjct: 509 KSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSL 568
Query: 281 TFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
TF L+ G C + ++EA + +++ G
Sbjct: 569 TFNALIHGLCADGKLKEATLLEEKMVKIGL 598
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 83/167 (49%), Gaps = 3/167 (1%)
Query: 159 EDADEIFKKMKETGLIPN---AVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E+A++ K+ E GL P+ +++ G C+ + A K+F M KG V YT +
Sbjct: 235 EEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHL 294
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ G A + D+A +F KM+ + P +YTVL++ LC R +A EM E G
Sbjct: 295 IHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGI 354
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
PN+ T+ L++ C + E+A+ + ++EKG N +N
Sbjct: 355 KPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALIN 401
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 3/161 (1%)
Query: 156 AMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIY 212
+ ++ +++ +M E + PN M++G CK G V+EA + + E G P+ Y
Sbjct: 197 GLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTY 256
Query: 213 TAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 272
T+++ GY + D A ++F +M G N +YT L+ GLC R+ +A + V+M +
Sbjct: 257 TSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKD 316
Query: 273 AGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
P V T+ L++ C + EA +K + E G N
Sbjct: 317 DECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPN 357
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 80/154 (51%), Gaps = 6/154 (3%)
Query: 159 EDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A ++F KMK+ P ++ LC EAL L M E G P I YT +
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++ K + A+ + +M G+ PN +Y L+ G CK ++DA + VE++E+
Sbjct: 365 IDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDV-VELMESRK 423
Query: 276 -SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
SPN T+ +L++G+CK + +A G + ++E+
Sbjct: 424 LSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLER 456
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 73/134 (54%), Gaps = 3/134 (2%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A + +KM +PN++ A++ GLC DG ++EA L M + G P + T +
Sbjct: 549 DEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTIL 608
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ K D A F++M S+G P+A +YT +Q C+ RL DA + +M E G
Sbjct: 609 IHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGV 668
Query: 276 SPNVTTFVDLVEGF 289
SP++ T+ L++G+
Sbjct: 669 SPDLFTYSSLIKGY 682
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 78/156 (50%), Gaps = 3/156 (1%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E+A ++F +++ G+ PN V A++DG CK G V EA + M K +P + + A+
Sbjct: 514 EEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNAL 573
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ G K +A + KM G+ P + T+L+ L K A+ +ML +G
Sbjct: 574 IHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGT 633
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
P+ T+ ++ +C+E + +A+ + + E G +
Sbjct: 634 KPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVS 669
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 1/137 (0%)
Query: 162 DEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTK 221
DE F+ +K +I +L+ L + GLV E +++ M E P I Y +V GY K
Sbjct: 172 DERFE-LKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCK 230
Query: 222 AHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTT 281
++A + K+ G+ P+ F+YT L+ G C+ L AF+ EM G N
Sbjct: 231 LGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVA 290
Query: 282 FVDLVEGFCKEQGIEEA 298
+ L+ G C + I+EA
Sbjct: 291 YTHLIHGLCVARRIDEA 307
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 78/157 (49%), Gaps = 8/157 (5%)
Query: 159 EDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A + +KM + GL P ++ L KDG A F M GT P+ YT
Sbjct: 584 KEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTF 643
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++ Y + + DA+ + KM+ NG+SP+ F+Y+ L++G + AF+ M + G
Sbjct: 644 IQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGC 703
Query: 276 SPNVTTFVDLVEG-----FCKEQGIEEAKGAIKTLIE 307
P+ TF+ L++ + K++G E A+ ++E
Sbjct: 704 EPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMME 740
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 59/114 (51%)
Query: 209 IVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCV 268
I Y ++ + D+ K+++ +M + + PN ++Y +V G CK +++A ++
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVS 242
Query: 269 EMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
+++EAG P+ T+ L+ G+C+ + ++ A + KG NE A ++
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIH 296
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 79/184 (42%), Gaps = 22/184 (11%)
Query: 161 ADEIFKKMKETG----------LIPNAVAMLDG--------LCKDGLVQE---ALKLFGL 199
A ++ K+M++TG LI + + M G LC + E ++L
Sbjct: 691 AFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEK 750
Query: 200 MREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN-GISPNAFSYTVLVQGLCKCS 258
M E P Y ++ G + A+++F MQ N GISP+ + L+ CK
Sbjct: 751 MVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLK 810
Query: 259 RLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVK 318
+ +A + +M+ GH P + + L+ G K+ E + L++ G+ +E A K
Sbjct: 811 KHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWK 870
Query: 319 DFLN 322
++
Sbjct: 871 IIID 874
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 88/164 (53%), Gaps = 5/164 (3%)
Query: 153 NQPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEI 209
N+ +P A E+ K+MK+ G+ PN V +++ GLCK G + +A + M K P +
Sbjct: 61 NRLVVP--ALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNV 118
Query: 210 VIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVE 269
+ ++A+++ Y K K +++ M I PN F+Y+ L+ GLC +R+ +A +
Sbjct: 119 ITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDL 178
Query: 270 MLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
M+ G +PNV T+ L GF K +++ + + ++G A N
Sbjct: 179 MISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAAN 222
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 82/154 (53%), Gaps = 3/154 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+DA + +M++ G+ + V ++D LCK+ LV AL++ M+++G P +V Y+++
Sbjct: 30 KDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSL 89
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ G K+ + DA+R +M S I+PN +++ L+ K +L M++
Sbjct: 90 ITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSI 149
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
PNV T+ L+ G C ++EA + +I KG
Sbjct: 150 DPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKG 183
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 76/144 (52%), Gaps = 3/144 (2%)
Query: 167 KMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAH 223
KM + G+ P+ V ++++G C +++A+ + G M + G ++V+ T +++ K
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 224 KADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFV 283
A + ++M+ GISPN +Y+ L+ GLCK RL DA EM +PNV TF
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 284 DLVEGFCKEQGIEEAKGAIKTLIE 307
L++ + K + + K +I+
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQ 146
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 68/141 (48%), Gaps = 3/141 (2%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
D ++K M + + PN +++ GLC V EA+K+ LM KG P +V Y+ +
Sbjct: 137 VDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLAN 196
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G+ K+ + DD ++ M G++ N S L++G + ++ A M G P
Sbjct: 197 GFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIP 256
Query: 278 NVTTFVDLVEGFCKEQGIEEA 298
N+ ++ ++ G +E+A
Sbjct: 257 NIRSYNIVLAGLFANGEVEKA 277
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 71/165 (43%), Gaps = 14/165 (8%)
Query: 105 GFQGRNRPDVANQLGDSFLDKFKLGFDNKAGNSSETNQSEEATKSSNSNQPAMPEDADEI 164
G NR D A ++ D + K N +T ++ + + +D ++
Sbjct: 162 GLCMHNRVDEAIKMLDLMISK-----------GCTPNVVTYSTLANGFFKSSRVDDGIKL 210
Query: 165 FKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTK 221
M + G+ N V+ ++ G + G + AL +FG M G IP I Y V+ G
Sbjct: 211 LDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFA 270
Query: 222 AHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEF 266
+ + A F MQ + +YT+++ G+CK +++A++
Sbjct: 271 NGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDL 315
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 89/176 (50%), Gaps = 6/176 (3%)
Query: 147 TKSSNSNQPAMPEDADE---IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLM 200
T SS N M + DE +F+ M PN V ++ G CK V+E ++LF M
Sbjct: 365 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM 424
Query: 201 REKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRL 260
++G + V YT ++ G+ +A D+A+ +F++M S G+ PN +Y +L+ GLCK +L
Sbjct: 425 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL 484
Query: 261 QDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKA 316
A + + P++ T+ ++EG CK +E+ L KG + N A
Sbjct: 485 AKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIA 540
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 84/153 (54%), Gaps = 5/153 (3%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTI-PEIVIYTAV 215
+A + +M + G P+ V +++GLCK G + AL L M EKG I ++VIY +
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKM-EKGKIEADVVIYNTI 264
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++G K DDA +F +M + GI P+ F+Y+ L+ LC R DA +M+E
Sbjct: 265 IDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKI 324
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
+PNV TF L++ F KE + EA+ +I++
Sbjct: 325 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 357
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 80/153 (52%), Gaps = 3/153 (1%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA + M E + PN V A++D K+G + EA KL+ M ++ P+I Y++++
Sbjct: 311 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 370
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G+ + D+AK +F M S PN +Y+ L++G CK R+++ E EM + G
Sbjct: 371 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLV 430
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
N T+ L+ GF + + + A+ K ++ G
Sbjct: 431 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG 463
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 81/156 (51%), Gaps = 3/156 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A +FK+M G+ PN + +LDGLCK+G + +A+ +F ++ P+I Y +
Sbjct: 450 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 509
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+EG KA K +D +F + G+SPN +Y ++ G C+ ++A +M E G
Sbjct: 510 IEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGP 569
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
PN T+ L+ ++ E + IK + GFA
Sbjct: 570 LPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFA 605
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 83/158 (52%), Gaps = 3/158 (1%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+DA +F +M G+ P+ +++ LC G +A +L M E+ P +V ++A+
Sbjct: 275 DDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 334
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++ + K K +A++++ +M I P+ F+Y+ L+ G C RL +A M+
Sbjct: 335 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 394
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
PNV T+ L++GFCK + +EE + + ++G N
Sbjct: 395 FPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGN 432
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 80/152 (52%), Gaps = 9/152 (5%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A++++ +M + + P+ ++++G C + EA +F LM K P +V Y+ ++
Sbjct: 346 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLI 405
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCK---CSRLQDAFEFCVEMLEA 273
+G+ KA + ++ +FR+M G+ N +YT L+ G + C Q F+ +M+
Sbjct: 406 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK---QMVSV 462
Query: 274 GHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTL 305
G PN+ T+ L++G CK + +A + L
Sbjct: 463 GVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 494
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 3/152 (1%)
Query: 160 DADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA + +M E G P+ ++ GL EA+ L M ++G P++V Y VV
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 230
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G K D A + +KM+ I + Y ++ GLCK + DA EM G
Sbjct: 231 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIR 290
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
P+V T+ L+ C +A + +IE+
Sbjct: 291 PDVFTYSSLISCLCNYGRWSDASRLLSDMIER 322
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 65/121 (53%)
Query: 190 VQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTV 249
V +A+ LFG M + P IV + ++ K +K + + +MQ+ GIS + ++Y++
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 250 LVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
+ C+ S+L A +M++ G+ P++ T L+ G+C + I +A + ++E G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 310 F 310
+
Sbjct: 184 Y 184
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 67/129 (51%), Gaps = 1/129 (0%)
Query: 181 LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGI 240
++ C+ + AL + M + G P+IV ++++ GY + + DA + +M G
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 241 SPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKG 300
P+ F++T L+ GL ++ +A +M++ G P++ T+ +V G CK I+ A
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALS 244
Query: 301 AIKTLIEKG 309
+K + EKG
Sbjct: 245 LLKKM-EKG 252
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 3/153 (1%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A + KM + G P+ V ++L+G C + +A+ L M E G P+ +T ++
Sbjct: 137 ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH 196
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G +KA +A + +M G P+ +Y +V GLCK + A +M +
Sbjct: 197 GLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 256
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
+V + +++G CK + +++A + KG
Sbjct: 257 DVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGI 289
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 68/154 (44%), Gaps = 3/154 (1%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+DA ++F M ++ P+ V +L + K + + L M+ G ++ Y+
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ + + + A + KM G P+ + + L+ G C R+ DA +M+E G+
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
P+ TF L+ G EA + ++++G
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 67/127 (52%), Gaps = 13/127 (10%)
Query: 164 IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
+F+ ++ + + P+ M++G+CK G V++ +LF + KG P ++ Y ++ G+
Sbjct: 490 VFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFC 549
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQD-----AFEFCVEMLEAGH 275
+ ++A + +KM+ +G PN+ +Y L++ +RL+D + E EM G
Sbjct: 550 RKGSKEEADSLLKKMKEDGPLPNSGTYNTLIR-----ARLRDGDREASAELIKEMRSCGF 604
Query: 276 SPNVTTF 282
+ + +T
Sbjct: 605 AGDASTI 611
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 79/143 (55%), Gaps = 3/143 (2%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A E++K+M ++ + PN V ++++GLC G + +A K F LM KG P +V Y +
Sbjct: 263 DEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTL 322
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ G+ K D+ ++F++M G + + F+Y L+ G C+ +L+ A + M+
Sbjct: 323 ISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRV 382
Query: 276 SPNVTTFVDLVEGFCKEQGIEEA 298
+P++ T L+ G C IE A
Sbjct: 383 TPDIITHCILLHGLCVNGEIESA 405
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 83/153 (54%), Gaps = 3/153 (1%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A E+ +M++ GL + V +L GLC G +A ++ M ++ P++V +TA+++
Sbjct: 195 ALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALID 254
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
+ K D+A+ ++++M + + PN +Y ++ GLC RL DA + M G P
Sbjct: 255 VFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFP 314
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
NV T+ L+ GFCK + ++E + + +GF
Sbjct: 315 NVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 77/153 (50%), Gaps = 3/153 (1%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA + M ++G PN V ++DGLCK+G + AL+L M +KG ++V Y ++
Sbjct: 159 DAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLL 218
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G + + DA R+ R M I+P+ ++T L+ K L +A E EM+++
Sbjct: 219 TGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVD 278
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
PN T+ ++ G C + +AK + KG
Sbjct: 279 PNNVTYNSIINGLCMHGRLYDAKKTFDLMASKG 311
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 3/165 (1%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A + KM + G P+ V ++L G C + +A L LM + G P +V+Y +++
Sbjct: 125 ALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLID 184
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G K + + A + +M+ G+ + +Y L+ GLC R DA +M++ +P
Sbjct: 185 GLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINP 244
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
+V TF L++ F K+ ++EA+ K +I+ N +N
Sbjct: 245 DVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIIN 289
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 64/123 (52%)
Query: 191 QEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVL 250
++A LF M +P IV +T ++ + + +KM+ GIS + +S+T+L
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112
Query: 251 VQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
+ C+CSRL A +M++ G+ P++ TF L+ GFC I +A + +++ G+
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172
Query: 311 AVN 313
N
Sbjct: 173 EPN 175
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 79/200 (39%), Gaps = 38/200 (19%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA + F M G PN V ++ G CK +V E +KLF M +G +I Y ++
Sbjct: 299 DAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLI 358
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFS------------------------------ 246
GY + K A IF M S ++P+ +
Sbjct: 359 HGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKY 418
Query: 247 -----YTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGA 301
Y +++ GLCK +++ A+E + G P+ T+ ++ G CK EA
Sbjct: 419 IGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADEL 478
Query: 302 IKTLIEKGFAVNEKAVKDFL 321
I+ + E+G A D L
Sbjct: 479 IRRMKEEGIICQMNAEDDHL 498
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 3/135 (2%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA + + M + + P+ V A++D K G + EA +L+ M + P V Y +++
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G + DAK+ F M S G PN +Y L+ G CK + + + M G +
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348
Query: 277 PNVTTFVDLVEGFCK 291
++ T+ L+ G+C+
Sbjct: 349 ADIFTYNTLIHGYCQ 363
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 3/146 (2%)
Query: 166 KKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKA 222
+KM+ G+ + + ++ C+ + AL + G M + G P IV + +++ G+
Sbjct: 95 QKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLV 154
Query: 223 HKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTF 282
++ DA + M +G PN Y L+ GLCK L A E EM + G +V T+
Sbjct: 155 NRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTY 214
Query: 283 VDLVEGFCKEQGIEEAKGAIKTLIEK 308
L+ G C +A ++ ++++
Sbjct: 215 NTLLTGLCYSGRWSDAARMLRDMMKR 240
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 55/114 (48%)
Query: 200 MREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSR 259
M G ++ +T ++ + + + A + KM G P+ ++ L+ G C +R
Sbjct: 97 MELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNR 156
Query: 260 LQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
+ DAF + M+++G+ PNV + L++G CK + A + + +KG +
Sbjct: 157 IGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGAD 210
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 85/155 (54%), Gaps = 5/155 (3%)
Query: 159 EDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A ++F+ M+E PN ++L G C++G + EA ++ M+E G P+IV++T +
Sbjct: 219 KEASKVFEDMREK-FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNL 277
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCS-RLQDAFEFCVEMLEAG 274
+ GY A K DA + M+ G PN YTVL+Q LC+ R+ +A VEM G
Sbjct: 278 LSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYG 337
Query: 275 HSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
++ T+ L+ GFCK I++ + + +KG
Sbjct: 338 CEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKG 372
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 10/190 (5%)
Query: 159 EDADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A +F +M+ G I A++ G CK G++ + + MR+KG +P V Y +
Sbjct: 324 DEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQI 383
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ + K + ++ + KM+ G P+ Y V+++ CK +++A EM G
Sbjct: 384 MVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGL 443
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF--AVNEKAVKDFLNK-----KKPFS 328
SP V TFV ++ GF + + EA K ++ +G A +K LN K +
Sbjct: 444 SPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMA 503
Query: 329 PSVWEAIFGK 338
VW I K
Sbjct: 504 KDVWSCISNK 513
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 77/154 (50%), Gaps = 4/154 (2%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A E+ +MKE GL P+ V +L G G + +A L MR++G P + YT ++
Sbjct: 254 EAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLI 313
Query: 217 EGYTKAHK-ADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ + K D+A R+F +M+ G + +YT L+ G CK + + +M + G
Sbjct: 314 QALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGV 373
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
P+ T++ ++ K++ EE I+ + +G
Sbjct: 374 MPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRG 407
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 68/136 (50%), Gaps = 1/136 (0%)
Query: 178 VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQS 237
V ++ +V++A+++ M + G P+ ++ +++ K +A ++F M+
Sbjct: 171 VVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMRE 230
Query: 238 NGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEE 297
PN +T L+ G C+ +L +A E V+M EAG P++ F +L+ G+ + +
Sbjct: 231 K-FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMAD 289
Query: 298 AKGAIKTLIEKGFAVN 313
A + + ++GF N
Sbjct: 290 AYDLMNDMRKRGFEPN 305
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 82/155 (52%), Gaps = 3/155 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
EDA EI ++ G P + ++DGL K G +A+KL MR K P+ + Y+++
Sbjct: 431 EDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSL 490
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
V G ++ K D+A + F + + GI PNA ++ ++ GLCK + A +F V M+ G
Sbjct: 491 VGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGC 550
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
PN T++ L+EG E +EA + L KG
Sbjct: 551 KPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 83/165 (50%), Gaps = 3/165 (1%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A E+ +M + P+ + +++ C+D V A+KL MR++G P++V Y +V
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G K + D+A + M S+G PN ++ ++++ +C R DA + +ML G SP
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
+V TF L+ C++ + A ++ + + G N + L+
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLH 387
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 3/159 (1%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A E ++M G P+ V ML LCKDG V++A+++ + KG P ++ Y V++
Sbjct: 398 AIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVID 457
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G KA K A ++ +M++ + P+ +Y+ LV GL + ++ +A +F E G P
Sbjct: 458 GLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRP 517
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKA 316
N TF ++ G CK + + A + +I +G NE +
Sbjct: 518 NAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETS 556
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 80/152 (52%), Gaps = 3/152 (1%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A ++ +M++ G P+ V +++G+CK+G + EA+K M G P ++ + ++
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
+ DA+++ M G SP+ ++ +L+ LC+ L A + +M + G P
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
N ++ L+ GFCKE+ ++ A ++ ++ +G
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 78/149 (52%), Gaps = 3/149 (2%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
+L LC G +++A+++ M ++ P+++ YT ++E + A ++ +M+
Sbjct: 209 TILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDR 268
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
G +P+ +Y VLV G+CK RL +A +F +M +G PNV T ++ C +A
Sbjct: 269 GCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDA 328
Query: 299 KGAIKTLIEKGFA---VNEKAVKDFLNKK 324
+ + ++ KGF+ V + +FL +K
Sbjct: 329 EKLLADMLRKGFSPSVVTFNILINFLCRK 357
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 140/332 (42%), Gaps = 77/332 (23%)
Query: 73 VNQRTREYNRGSRSRFDGNRDEVEKTTMKSDLGFQGRNR---PDVANQLGDSFLD----K 125
+ Q REY RG++ D + + K LG + RNR A+++ S L+ K
Sbjct: 17 IQQFHREYKRGNK--LDVSCRTSGSISSKIPLGSRKRNRLVLVSAASKVESSGLNGRAQK 74
Query: 126 FKL---GFDNKAGNS--SETNQS---EEATKSSNSNQPAMPEDADEIFK---KMKETGLI 174
F+ G+ N GN S N S E+ +++ Q + +E FK M G +
Sbjct: 75 FETLSSGYSNSNGNGHYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNV 134
Query: 175 PNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDA--- 228
P+ + ++ G C+ G ++A K+ ++ G +P+++ Y ++ GY KA + ++A
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV 194
Query: 229 -------------KRIFRKMQSNG----------------ISPNAFSYTVLVQGLCKCSR 259
I R + +G P+ +YT+L++ C+ S
Sbjct: 195 LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSG 254
Query: 260 LQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN------ 313
+ A + EM + G +P+V T+ LV G CKE ++EA + + G N
Sbjct: 255 VGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNI 314
Query: 314 --------------EKAVKDFLNKKKPFSPSV 331
EK + D L +K FSPSV
Sbjct: 315 ILRSMCSTGRWMDAEKLLADML--RKGFSPSV 344
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 70/141 (49%), Gaps = 3/141 (2%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A +I +KM + G PN+++ +L G CK+ + A++ M +G P+IV Y ++
Sbjct: 363 AIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLT 422
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
K K +DA I ++ S G SP +Y ++ GL K + A + EM P
Sbjct: 423 ALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKP 482
Query: 278 NVTTFVDLVEGFCKEQGIEEA 298
+ T+ LV G +E ++EA
Sbjct: 483 DTITYSSLVGGLSREGKVDEA 503
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 3/154 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A + M +G PN + +L +C G +A KL M KG P +V + +
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ + A I KM +G PN+ SY L+ G CK ++ A E+ M+ G
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
P++ T+ ++ CK+ +E+A + L KG
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 68/135 (50%), Gaps = 3/135 (2%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA+++ M G P+ V +++ LC+ GL+ A+ + M + G P + Y ++
Sbjct: 327 DAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLL 386
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G+ K K D A +M S G P+ +Y ++ LCK +++DA E ++ G S
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446
Query: 277 PNVTTFVDLVEGFCK 291
P + T+ +++G K
Sbjct: 447 PVLITYNTVIDGLAK 461
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 87/169 (51%), Gaps = 6/169 (3%)
Query: 147 TKSSNSNQPAMPEDADE---IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLM 200
T SS N M + DE +F+ M PN V +++G CK + E ++LF M
Sbjct: 367 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREM 426
Query: 201 REKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRL 260
++G + V YT ++ G+ +A D+A+ +F++M S+G+ PN +Y L+ GLCK +L
Sbjct: 427 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 486
Query: 261 QDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
+ A + + P + T+ ++EG CK +E+ +L KG
Sbjct: 487 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 535
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 3/152 (1%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A + +M + G PN V +++GLCK G + A L M +VIY+ V+
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+ K DDA +F +M++ G+ PN +Y+ L+ LC R DA +M+E +
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN 327
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
PNV TF L++ F KE + EA+ +I++
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR 359
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 3/166 (1%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA + M E + PN V A++D K+G + EA KL+ M ++ P+I Y++++
Sbjct: 313 DASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 372
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G+ + D+AK +F M S PN +Y L+ G CK R+ + E EM + G
Sbjct: 373 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLV 432
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
N T+ L+ GF + + + A+ K ++ G N L+
Sbjct: 433 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 478
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 82/158 (51%), Gaps = 3/158 (1%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+DA +F +M+ G+ PN + +++ LC +A +L M E+ P +V + A+
Sbjct: 277 DDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNAL 336
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++ + K K +A++++ +M I P+ F+Y+ L+ G C RL +A M+
Sbjct: 337 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 396
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
PNV T+ L+ GFCK + I+E + + ++G N
Sbjct: 397 FPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGN 434
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 79/152 (51%), Gaps = 9/152 (5%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A++++ +M + + P+ ++++G C + EA +F LM K P +V Y ++
Sbjct: 348 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 407
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCK---CSRLQDAFEFCVEMLEA 273
G+ KA + D+ +FR+M G+ N +YT L+ G + C Q F+ +M+
Sbjct: 408 NGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK---QMVSD 464
Query: 274 GHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTL 305
G PN+ T+ L++G CK +E+A + L
Sbjct: 465 GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 496
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 67/152 (44%), Gaps = 3/152 (1%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA + +M E G P+ + ++ GL EA+ L M ++G P +V Y VV
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G K D A + KM++ I N Y+ ++ LCK DA EM G
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
PNV T+ L+ C + +A + +IE+
Sbjct: 293 PNVITYSSLISCLCNYERWSDASRLLSDMIER 324
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 63/121 (52%)
Query: 190 VQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTV 249
+ +A+ LFG M + +P I + ++ K K D + KMQ GIS N ++Y +
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125
Query: 250 LVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
L+ C+ S++ A +M++ G+ P++ T L+ G+C + I +A + ++E G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 310 F 310
+
Sbjct: 186 Y 186
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 66/126 (52%), Gaps = 3/126 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A +FK+M G+ PN + +LDGLCK+G +++A+ +F ++ P I Y +
Sbjct: 452 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 511
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+EG KA K +D +F + G+ P+ Y ++ G C+ ++A +M E G
Sbjct: 512 IEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGP 571
Query: 276 SPNVTT 281
P+ T
Sbjct: 572 LPDSGT 577
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 3/152 (1%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A + KM + G P+ V ++L+G C + +A+ L M E G P+ + +T ++
Sbjct: 139 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 198
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G +KA +A + +M G PN +Y V+V GLCK + AF +M A
Sbjct: 199 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA 258
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
NV + +++ CK + ++A + KG
Sbjct: 259 NVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 290
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 3/136 (2%)
Query: 166 KKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKA 222
+KM+ G+ N +++ C+ + AL L G M + G P IV ++++ GY
Sbjct: 109 EKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 168
Query: 223 HKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTF 282
+ DA + +M G P+ ++T L+ GL ++ +A M++ G PN+ T+
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 283 VDLVEGFCKEQGIEEA 298
+V G CK I+ A
Sbjct: 229 GVVVNGLCKRGDIDLA 244
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 84/150 (56%), Gaps = 3/150 (2%)
Query: 163 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 219
E +++MK GL PN V+ ++D CK+G++Q+A+K + MR G +P YT++++
Sbjct: 353 EFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAN 412
Query: 220 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNV 279
K DA R+ +M G+ N +YT L+ GLC R+++A E +M AG PN+
Sbjct: 413 CKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNL 472
Query: 280 TTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
++ L+ GF K + ++ A + L +G
Sbjct: 473 ASYNALIHGFVKAKNMDRALELLNELKGRG 502
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 3/143 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+D FK M G P M+D +CK+G V+ A LF M+ +G +P+ V Y ++
Sbjct: 244 DDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSM 303
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++G+ K + DD F +M+ P+ +Y L+ CK +L EF EM G
Sbjct: 304 IDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGL 363
Query: 276 SPNVTTFVDLVEGFCKEQGIEEA 298
PNV ++ LV+ FCKE +++A
Sbjct: 364 KPNVVSYSTLVDAFCKEGMMQQA 386
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 86/182 (47%), Gaps = 3/182 (1%)
Query: 135 GNSSETNQSEEATKSSNSNQPAMPEDADEIFKKMKETGLIPN---AVAMLDGLCKDGLVQ 191
GN + N +T + M + A + + M+ GL+PN +++D CK G +
Sbjct: 360 GNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLS 419
Query: 192 EALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLV 251
+A +L M + G +V YTA+++G A + +A+ +F KM + G+ PN SY L+
Sbjct: 420 DAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALI 479
Query: 252 QGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
G K + A E E+ G P++ + + G C + IE AK + + E G
Sbjct: 480 HGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIK 539
Query: 312 VN 313
N
Sbjct: 540 AN 541
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 77/143 (53%), Gaps = 3/143 (2%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A +F++MK GL+P+ V +M+DG K G + + + F M++ P+++ Y A+
Sbjct: 279 EAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNAL 338
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ + K K +R+M+ NG+ PN SY+ LV CK +Q A +F V+M G
Sbjct: 339 INCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGL 398
Query: 276 SPNVTTFVDLVEGFCKEQGIEEA 298
PN T+ L++ CK + +A
Sbjct: 399 VPNEYTYTSLIDANCKIGNLSDA 421
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 76/144 (52%), Gaps = 3/144 (2%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+D F++MK+ P+ + A+++ CK G + L+ + M+ G P +V Y+ +
Sbjct: 314 DDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTL 373
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
V+ + K A + + M+ G+ PN ++YT L+ CK L DAF EML+ G
Sbjct: 374 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 433
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAK 299
NV T+ L++G C + ++EA+
Sbjct: 434 EWNVVTYTALIDGLCDAERMKEAE 457
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 68/135 (50%), Gaps = 3/135 (2%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA + +M + G+ N V A++DGLC ++EA +LFG M G IP + Y A++
Sbjct: 420 DAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALI 479
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G+ KA D A + +++ GI P+ Y + GLC +++ A EM E G
Sbjct: 480 HGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIK 539
Query: 277 PNVTTFVDLVEGFCK 291
N + L++ + K
Sbjct: 540 ANSLIYTTLMDAYFK 554
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 70/130 (53%), Gaps = 3/130 (2%)
Query: 172 GLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDA 228
GL NA AM+DGLCKD V+ A LF M +KG +P+ YT++++G K +A
Sbjct: 608 GLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEA 667
Query: 229 KRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEG 288
+ KM G+ + +YT LV GL C++LQ A F EM+ G P+ + +++
Sbjct: 668 LALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKK 727
Query: 289 FCKEQGIEEA 298
+ I+EA
Sbjct: 728 HYELGCIDEA 737
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 3/143 (2%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A+E+F KM G+IPN A++ G K + AL+L ++ +G P++++Y
Sbjct: 454 KEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTF 513
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ G K + AK + +M+ GI N+ YT L+ K + EM E
Sbjct: 514 IWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDI 573
Query: 276 SPNVTTFVDLVEGFCKEQGIEEA 298
V TF L++G CK + + +A
Sbjct: 574 EVTVVTFCVLIDGLCKNKLVSKA 596
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 90/195 (46%), Gaps = 10/195 (5%)
Query: 133 KAGNSSETNQSEEATKSSNSNQPAMPEDADEIFKKMKETGL---IPNAVAMLDGLCKDGL 189
KA + T + KS N P + + +MKE + + ++DGLCK+ L
Sbjct: 539 KANSLIYTTLMDAYFKSGN------PTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKL 592
Query: 190 VQEALKLFG-LMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYT 248
V +A+ F + + G I+TA+++G K ++ + A +F +M G+ P+ +YT
Sbjct: 593 VSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYT 652
Query: 249 VLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
L+ G K + +A +M E G ++ + LV G +++A+ ++ +I +
Sbjct: 653 SLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGE 712
Query: 309 GFAVNEKAVKDFLNK 323
G +E L K
Sbjct: 713 GIHPDEVLCISVLKK 727
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 3/138 (2%)
Query: 157 MPEDADEIFKKMKETGLIP---NAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 213
M E+A + F KMK + P + +L K G + + F M G P + Y
Sbjct: 207 MLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYN 266
Query: 214 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 273
+++ K + A+ +F +M+ G+ P+ +Y ++ G K RL D F EM +
Sbjct: 267 IMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDM 326
Query: 274 GHSPNVTTFVDLVEGFCK 291
P+V T+ L+ FCK
Sbjct: 327 CCEPDVITYNALINCFCK 344
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 54/111 (48%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
A+ L G+++EA++ F M+ P+ ++ + K K DD KR F+ M
Sbjct: 197 ALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGA 256
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGF 289
G P F+Y +++ +CK ++ A EM G P+ T+ +++GF
Sbjct: 257 GARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGF 307
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 90/169 (53%), Gaps = 6/169 (3%)
Query: 147 TKSSNSNQPAMPEDADE---IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLM 200
T SS N M + DE +F+ M PN V ++ G CK V+E ++LF M
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421
Query: 201 REKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRL 260
++G + V Y +++G +A D A++IF+KM S+G+ P+ +Y++L+ GLCK +L
Sbjct: 422 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL 481
Query: 261 QDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
+ A + ++ P++ T+ ++EG CK +E+ +L KG
Sbjct: 482 EKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 85/154 (55%), Gaps = 3/154 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E+ E+F++M + GL+ N V ++ GL + G A K+F M G P+I+ Y+ +
Sbjct: 412 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 471
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++G K K + A +F +Q + + P+ ++Y ++++G+CK +++D ++ + G
Sbjct: 472 LDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 531
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
PNV + ++ GFC++ EEA + + E G
Sbjct: 532 KPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 565
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 83/157 (52%), Gaps = 3/157 (1%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA +F +M G+ PN V +++ LC G +A +L M E+ P +V ++A++
Sbjct: 273 DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 332
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+ + K K +A++++ +M I P+ F+Y+ L+ G C RL +A M+
Sbjct: 333 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 392
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
PNV T+ L++GFCK + +EE + + ++G N
Sbjct: 393 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGN 429
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 80/153 (52%), Gaps = 5/153 (3%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTI-PEIVIYTAV 215
+A + +M G P+ +++GLCK G + AL L M EKG I ++VIYT +
Sbjct: 203 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM-EKGKIEADVVIYTTI 261
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++ +DA +F +M + GI PN +Y L++ LC R DA +M+E
Sbjct: 262 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 321
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
+PNV TF L++ F KE + EA+ +I++
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 3/153 (1%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA + M E + PN V A++D K+G + EA KL+ M ++ P+I Y++++
Sbjct: 308 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 367
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G+ + D+AK +F M S PN +Y L++G CK R+++ E EM + G
Sbjct: 368 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV 427
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
N T+ L++G + + A+ K ++ G
Sbjct: 428 GNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 82/165 (49%), Gaps = 3/165 (1%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A +IFKKM G+ P+ + +LDGLCK G +++AL +F +++ P+I Y ++E
Sbjct: 449 AQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIE 508
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G KA K +D +F + G+ PN YT ++ G C+ ++A EM E G P
Sbjct: 509 GMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLP 568
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
N T+ L+ ++ + IK + GF + + +N
Sbjct: 569 NSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 613
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 79/145 (54%), Gaps = 9/145 (6%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A++++ +M + + P+ ++++G C + EA +F LM K P +V Y ++
Sbjct: 343 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 402
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCK---CSRLQDAFEFCVEMLEA 273
+G+ KA + ++ +FR+M G+ N +Y L+QGL + C Q F+ +M+
Sbjct: 403 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFK---KMVSD 459
Query: 274 GHSPNVTTFVDLVEGFCKEQGIEEA 298
G P++ T+ L++G CK +E+A
Sbjct: 460 GVPPDIITYSILLDGLCKYGKLEKA 484
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 75/151 (49%), Gaps = 3/151 (1%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A + KKM++ + + V ++D LC V +AL LF M KG P +V Y +++
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
+ DA R+ M I+PN +++ L+ K +L +A + EM++ P
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
++ T+ L+ GFC ++EAK + +I K
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISK 389
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 58/137 (42%), Gaps = 3/137 (2%)
Query: 175 PNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRI 231
PN V ++ GL EA+ L M +G P++ Y VV G K D A +
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 242
Query: 232 FRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCK 291
+KM+ I + YT ++ LC + DA EM G PNV T+ L+ C
Sbjct: 243 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 302
Query: 292 EQGIEEAKGAIKTLIEK 308
+A + +IE+
Sbjct: 303 YGRWSDASRLLSDMIER 319
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 60/113 (53%)
Query: 190 VQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTV 249
+ +A+ LFG M + +P IV + ++ K +K D + +MQ+ IS + +SY +
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 250 LVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAI 302
L+ C+ S+L A +M++ G+ P++ T L+ G+C + I EA +
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALV 173
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 67/153 (43%), Gaps = 3/153 (1%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A + KM + G P+ V ++L+G C + EA+ L M P V + ++
Sbjct: 134 ALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIH 193
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G +KA +A + +M + G P+ F+Y +V GLCK + A +M +
Sbjct: 194 GLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 253
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
+V + +++ C + + +A + KG
Sbjct: 254 DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI 286
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 1/130 (0%)
Query: 180 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 239
+++ C+ + AL + G M + G P+IV ++++ GY + +A + +M
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 240 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAK 299
PN ++ L+ GL ++ +A M+ G P++ T+ +V G CK I+ A
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 300 GAIKTLIEKG 309
+K + EKG
Sbjct: 241 SLLKKM-EKG 249
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 78/142 (54%), Gaps = 3/142 (2%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A I KM + G P+ V ++++G C+ V +A+ L M E G P+IV Y A+++
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 198
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
K + +DA F++++ GI PN +YT LV GLC SR DA +M++ +P
Sbjct: 199 SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 258
Query: 278 NVTTFVDLVEGFCKEQGIEEAK 299
NV T+ L++ F K + EAK
Sbjct: 259 NVITYSALLDAFVKNGKVLEAK 280
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 79/166 (47%), Gaps = 3/166 (1%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA + KM E G P+ VA ++D LCK V +A F + KG P +V YTA+V
Sbjct: 173 DAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALV 232
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G + + DA R+ M I+PN +Y+ L+ K ++ +A E EM+
Sbjct: 233 NGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSID 292
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
P++ T+ L+ G C I+EA ++ KG + + +N
Sbjct: 293 PDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLIN 338
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 103/212 (48%), Gaps = 14/212 (6%)
Query: 105 GFQGRNRPDVANQLGDSFLDKFKLGFDNKAGNSSETNQSEEATKSSNSNQPAMPEDADEI 164
GF RNR A L D ++ +G+ + S TK N DA +
Sbjct: 164 GFCRRNRVSDAVSLVDKMVE---IGYKPDIVAYNAIIDSLCKTKRVN--------DAFDF 212
Query: 165 FKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTK 221
FK+++ G+ PN V A+++GLC +A +L M +K P ++ Y+A+++ + K
Sbjct: 213 FKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVK 272
Query: 222 AHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTT 281
K +AK +F +M I P+ +Y+ L+ GLC R+ +A + M+ G +V +
Sbjct: 273 NGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVS 332
Query: 282 FVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
+ L+ GFCK + +E+ + + ++G N
Sbjct: 333 YNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 80/142 (56%), Gaps = 3/142 (2%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A E+F++M + P+ V ++++GLC + EA ++F LM KG + ++V Y ++
Sbjct: 278 EAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLI 337
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G+ KA + +D ++FR+M G+ N +Y L+QG + + A EF +M G S
Sbjct: 338 NGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS 397
Query: 277 PNVTTFVDLVEGFCKEQGIEEA 298
P++ T+ L+ G C +E+A
Sbjct: 398 PDIWTYNILLGGLCDNGELEKA 419
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 83/155 (53%), Gaps = 3/155 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A+++F M G + + V+ +++G CK V++ +KLF M ++G + V Y +
Sbjct: 312 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTL 371
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++G+ +A D A+ F +M GISP+ ++Y +L+ GLC L+ A +M +
Sbjct: 372 IQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREM 431
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
++ T+ ++ G CK +EEA +L KG
Sbjct: 432 DLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL 466
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 74/143 (51%), Gaps = 3/143 (2%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA + M + + PN + A+LD K+G V EA +LF M P+IV Y++++
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G + D+A ++F M S G + SY L+ G CK R++D + EM + G
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
Query: 277 PNVTTFVDLVEGFCKEQGIEEAK 299
N T+ L++GF + +++A+
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQ 385
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 61/124 (49%)
Query: 190 VQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTV 249
V AL + G M + G P+ V ++V G+ + ++ DA + KM G P+ +Y
Sbjct: 136 VSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNA 195
Query: 250 LVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
++ LCK R+ DAF+F E+ G PNV T+ LV G C +A + +I+K
Sbjct: 196 IIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKK 255
Query: 310 FAVN 313
N
Sbjct: 256 ITPN 259
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 69/143 (48%), Gaps = 3/143 (2%)
Query: 186 KDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAF 245
+D + +A+ LF M + P IV + ++ K K D + +KM+ GI + +
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 246 SYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTL 305
++ +++ C C ++ A +ML+ G+ P+ T LV GFC+ + +A + +
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 306 IEKGF---AVNEKAVKDFLNKKK 325
+E G+ V A+ D L K K
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTK 204
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
Query: 154 QPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIV 210
Q + A E F +M G+ P+ +L GLC +G +++AL +F M+++ +IV
Sbjct: 377 QAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIV 436
Query: 211 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 270
YT V+ G K K ++A +F + G+ P+ +YT ++ GLC L + +M
Sbjct: 437 TYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Query: 271 LEAGHSPNVTTFVD 284
+ G N T D
Sbjct: 497 KQEGLMKNDCTLSD 510
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 67/154 (43%), Gaps = 3/154 (1%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA ++F M ++ P+ V +L + K + L M G ++ + V+
Sbjct: 68 DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+ + A I KM G P+ + LV G C+ +R+ DA +M+E G+
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 187
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
P++ + +++ CK + + +A K + KG
Sbjct: 188 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGI 221
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 83/149 (55%), Gaps = 3/149 (2%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A ++K+M ++PN ++++G C G + +A +F LM KG P++V Y ++
Sbjct: 272 EARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLI 331
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G+ K+ + +D ++F +M G+ +AF+Y L+ G C+ +L A + M++ G S
Sbjct: 332 TGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVS 391
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTL 305
P++ T+ L++ C IE+A ++ L
Sbjct: 392 PDIVTYNILLDCLCNNGKIEKALVMVEDL 420
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 81/153 (52%), Gaps = 3/153 (1%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA +F M G P+ V ++ G CK V++ +KLF M +G + + Y ++
Sbjct: 307 DAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLI 366
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
GY +A K + A+++F +M G+SP+ +Y +L+ LC +++ A ++ ++
Sbjct: 367 HGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMD 426
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
++ T+ +++G C+ ++EA ++L KG
Sbjct: 427 VDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKG 459
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 3/159 (1%)
Query: 167 KMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAH 223
KM + G P+ V ++L+G C+ QEA+ L M G +P +VIY V+ G K
Sbjct: 139 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNR 198
Query: 224 KADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFV 283
++A +F M+ GI +A +Y L+ GL R DA +M++ PNV F
Sbjct: 199 DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFT 258
Query: 284 DLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
L++ F KE + EA+ K +I + N +N
Sbjct: 259 ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 3/154 (1%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A + M G +PN V +++GLCK+ + AL++F M +KG + V Y +
Sbjct: 166 QEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTL 225
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ G + + + DA R+ R M I PN +T L+ K L +A EM+
Sbjct: 226 ISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSV 285
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
PNV T+ L+ GFC + +AK ++ KG
Sbjct: 286 VPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 319
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA + + M + + PN + A++D K+G + EA L+ M + +P + Y +++
Sbjct: 237 DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLI 296
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G+ DAK +F M S G P+ +Y L+ G CK R++D + EM G
Sbjct: 297 NGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV 356
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
+ T+ L+ G+C+ + A+ +++ G
Sbjct: 357 GDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG 389
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 78/155 (50%), Gaps = 3/155 (1%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A E+F M++ G+ +AV ++ GL G +A +L M ++ P ++ +TA++
Sbjct: 202 NALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALI 261
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+ + K +A+ ++++M + PN F+Y L+ G C L DA M+ G
Sbjct: 262 DTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCF 321
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
P+V T+ L+ GFCK + +E+ + +G
Sbjct: 322 PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV 356
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 68/131 (51%)
Query: 192 EALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLV 251
+A LF M + IP IV +T V+ K +K D ++ KM++ GIS + +S+T+L+
Sbjct: 62 DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILI 121
Query: 252 QGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
C+CSRL A +M++ G P++ T L+ GFC+ +EA + ++ GF
Sbjct: 122 HCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFV 181
Query: 312 VNEKAVKDFLN 322
N +N
Sbjct: 182 PNVVIYNTVIN 192
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 88/163 (53%), Gaps = 3/163 (1%)
Query: 152 SNQPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPE 208
S + + DA E+F +M+ G+ +AV +++ GLC G +A +L M + +P
Sbjct: 184 SCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPN 243
Query: 209 IVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCV 268
++ +TAV++ + K K +A +++ +M + P+ F+Y L+ GLC R+ +A +
Sbjct: 244 VITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLD 303
Query: 269 EMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
M+ G P+V T+ L+ GFCK + ++E + + ++G
Sbjct: 304 LMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 346
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 3/153 (1%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA ++ KM+E G P+ V ++DG CK GLV +A++LF M G + V Y ++V
Sbjct: 157 DAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLV 216
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G + + DA R+ R M I PN ++T ++ K + +A + EM
Sbjct: 217 AGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD 276
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
P+V T+ L+ G C ++EAK + ++ KG
Sbjct: 277 PDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 309
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 74/141 (52%), Gaps = 3/141 (2%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A + KM + G P+ V ++++G C+ V +A+ L M E G P++VIY +++
Sbjct: 123 ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIID 182
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G K +DA +F +M+ +G+ +A +Y LV GLC R DA +M+ P
Sbjct: 183 GSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP 242
Query: 278 NVTTFVDLVEGFCKEQGIEEA 298
NV TF +++ F KE EA
Sbjct: 243 NVITFTAVIDVFVKEGKFSEA 263
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 76/142 (53%), Gaps = 6/142 (4%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A +++++M + P+ ++++GLC G V EA ++ LM KG +P++V Y ++
Sbjct: 262 EAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLI 321
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G+ K+ + D+ ++FR+M G+ + +Y ++QG + R A E M
Sbjct: 322 NGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSR 378
Query: 277 PNVTTFVDLVEGFCKEQGIEEA 298
PN+ T+ L+ G C +E+A
Sbjct: 379 PNIRTYSILLYGLCMNWRVEKA 400
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 100/214 (46%), Gaps = 20/214 (9%)
Query: 90 GNR--DEVEKTTMKSDLGFQGRNRPDVANQLGDSFLD-KFKLGFDNKAG---NSSETNQS 143
GNR D ++ + ++GF RPDV + ++ +D K+G N A + E +
Sbjct: 152 GNRVFDAIDLVSKMEEMGF----RPDVV--IYNTIIDGSCKIGLVNDAVELFDRMERDGV 205
Query: 144 EEATKSSNSNQPAMP-----EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALK 195
+ NS + DA + + M ++PN + A++D K+G EA+K
Sbjct: 206 RADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMK 265
Query: 196 LFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLC 255
L+ M + P++ Y +++ G + D+AK++ M + G P+ +Y L+ G C
Sbjct: 266 LYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFC 325
Query: 256 KCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGF 289
K R+ + + EM + G + T+ +++G+
Sbjct: 326 KSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGY 359
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 63/121 (52%)
Query: 190 VQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTV 249
++E + LF M + +P IV ++ V+ K+ D +F M+ GI + +SY +
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 250 LVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
++ LC+CSR A +M++ G+ P+V T L+ GFC+ + +A + + E G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 310 F 310
F
Sbjct: 170 F 170
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 86/187 (45%), Gaps = 35/187 (18%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A ++ M G +P+ V +++G CK V E KLF M ++G + + + Y +
Sbjct: 296 DEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTI 355
Query: 216 VEGYTKAHKADDAKRIFRKM--------------------------------QSNGISPN 243
++GY +A + D A+ IF +M Q + I +
Sbjct: 356 IQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELD 415
Query: 244 AFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIK 303
+Y +++ G+CK ++DA++ + G P+V ++ ++ GFC+++ +++ +
Sbjct: 416 ITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYR 475
Query: 304 TLIEKGF 310
+ E G
Sbjct: 476 KMQEDGL 482
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 52/103 (50%)
Query: 154 QPAMPEDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 213
Q P+ A EIF +M I +L GLC + V++AL LF M++ +I Y
Sbjct: 361 QAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYN 420
Query: 214 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCK 256
V+ G K +DA +FR + G+ P+ SYT ++ G C+
Sbjct: 421 IVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCR 463
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 79/174 (45%), Gaps = 6/174 (3%)
Query: 164 IFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
+F M+ G+ + + +++ LC+ AL + G M + G P++V ++++ G+
Sbjct: 91 LFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFC 150
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
+ ++ DA + KM+ G P+ Y ++ G CK + DA E M G +
Sbjct: 151 QGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAV 210
Query: 281 TFVDLVEGFCKEQGIEEAKGAIKTLIEKGF---AVNEKAVKDFLNKKKPFSPSV 331
T+ LV G C +A ++ ++ + + AV D K+ FS ++
Sbjct: 211 TYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAM 264
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Query: 159 EDADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A +F+ M+++ + I ++ G+CK G V++A LF + KG P++V YT +
Sbjct: 398 EKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTM 457
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISP 242
+ G+ + + D + ++RKMQ +G+ P
Sbjct: 458 ISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 72/156 (46%), Gaps = 7/156 (4%)
Query: 146 ATKSSNSNQPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMRE 202
+TK S+ N E+ ++F KM ++ +P+ V +L + K + LF M
Sbjct: 42 STKRSSMNL----EEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEV 97
Query: 203 KGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQD 262
G ++ Y V+ + + A + KM G P+ + + L+ G C+ +R+ D
Sbjct: 98 CGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFD 157
Query: 263 AFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
A + +M E G P+V + +++G CK + +A
Sbjct: 158 AIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDA 193
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 84/155 (54%), Gaps = 3/155 (1%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A+ + K+M + G+ P+ + ++DGLCK G++ +A + GLM+ G P+ V Y ++
Sbjct: 344 EAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLL 403
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
GY K D AK + ++M N PNA++ +L+ L K R+ +A E +M E G+
Sbjct: 404 HGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYG 463
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
+ T +V+G C +++A +K + G A
Sbjct: 464 LDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSA 498
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 7/154 (4%)
Query: 160 DADEIFKKMKETGLI----PNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIY 212
DA IF M+ + PN++ ML G CK GL+++A LF +RE + + Y
Sbjct: 270 DASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSY 329
Query: 213 TAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 272
++G + K +A+ + ++M GI P+ +SY +L+ GLCK L DA M
Sbjct: 330 NIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKR 389
Query: 273 AGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLI 306
G P+ T+ L+ G+C ++ AK ++ ++
Sbjct: 390 NGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMM 423
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 79/154 (51%), Gaps = 7/154 (4%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A E+F +M E G PN ++ G CK GL + L+L M G +P VIY +V
Sbjct: 166 ARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVS 225
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH-- 275
+ + + DD++++ KM+ G+ P+ ++ + LCK ++ DA +M +
Sbjct: 226 SFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLG 285
Query: 276 --SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIE 307
PN T+ +++GFCK +E+AK +++ E
Sbjct: 286 LPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRE 319
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 3/161 (1%)
Query: 156 AMPEDADEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIY 212
+ EDA +F+ ++E + + + L GL + G EA + M +KG P I Y
Sbjct: 305 GLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSY 364
Query: 213 TAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 272
+++G K DAK I M+ NG+ P+A +Y L+ G C ++ A EM+
Sbjct: 365 NILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMR 424
Query: 273 AGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
PN T L+ K I EA+ ++ + EKG+ ++
Sbjct: 425 NNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLD 465
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 76/150 (50%), Gaps = 3/150 (2%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A +F +M L P++VA + CK G + A ++ M +KG + Y +++
Sbjct: 542 EAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLI 601
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G ++ + + +M+ GISPN +Y +Q LC+ +++DA EM++ +
Sbjct: 602 LGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIA 661
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLI 306
PNV +F L+E FCK + A+ +T +
Sbjct: 662 PNVFSFKYLIEAFCKVPDFDMAQEVFETAV 691
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 62/138 (44%), Gaps = 3/138 (2%)
Query: 164 IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
++K M G+ P ++ LC V A +LF M EKG P + +V GY
Sbjct: 134 LYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYC 193
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
KA D + M+S G+ PN Y +V C+ R D+ + +M E G P++
Sbjct: 194 KAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIV 253
Query: 281 TFVDLVEGFCKEQGIEEA 298
TF + CKE + +A
Sbjct: 254 TFNSRISALCKEGKVLDA 271
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 72/149 (48%), Gaps = 3/149 (2%)
Query: 168 MKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHK 224
+ E +P+ + +L+GLCK G EA LF M + P+ V Y + + K K
Sbjct: 515 LIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGK 574
Query: 225 ADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVD 284
A R+ + M+ G + +Y L+ GL +++ + EM E G SPN+ T+
Sbjct: 575 ISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNT 634
Query: 285 LVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
++ C+ + +E+A + +++K A N
Sbjct: 635 AIQYLCEGEKVEDATNLLDEMMQKNIAPN 663
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 72/167 (43%), Gaps = 37/167 (22%)
Query: 188 GLVQEALKLFGLM---REKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNA 244
G+ + ++ GLM +EKG P I Y ++ + K +DA + +M I+PN
Sbjct: 605 GIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNV 664
Query: 245 FSYTVLVQGLCKC---SRLQDAFEFCV---------------EMLEAGHSPNVT------ 280
FS+ L++ CK Q+ FE V E+L AG T
Sbjct: 665 FSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAV 724
Query: 281 --------TFV--DLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAV 317
TF+ DLVE CK+ +E A G + +I++G+ + A+
Sbjct: 725 LDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAAL 771
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 207 PEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEF 266
P + +Y ++E K + + +++ M GI+P +++ +L++ LC S + A E
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 267 CVEMLEAGHSPNVTTFVDLVEGFCK----EQGIE 296
EM E G PN TF LV G+CK ++G+E
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLE 203
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 59/132 (44%)
Query: 180 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 239
+L+ K+ V+ L+ M G P+ + ++ + D A+ +F +M G
Sbjct: 118 LLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKG 177
Query: 240 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAK 299
PN F++ +LV+G CK E M G PN + +V FC+E ++++
Sbjct: 178 CKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSE 237
Query: 300 GAIKTLIEKGFA 311
++ + E+G
Sbjct: 238 KMVEKMREEGLV 249
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 87/167 (52%), Gaps = 5/167 (2%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTI-PEIVIYTAV 215
+A + ++M G P+ V A+++GLCK G AL L M EKG I ++VIY+ V
Sbjct: 188 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM-EKGKIEADVVIYSTV 246
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++ K DDA +F +M + GI P+ F+Y+ L+ LC R DA +MLE
Sbjct: 247 IDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKI 306
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
+PNV TF L++ F KE + EA+ +I++ N +N
Sbjct: 307 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLIN 353
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 80/149 (53%), Gaps = 3/149 (2%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A+++F +M + + PN V ++++G C + EA ++F LM K +P++V Y ++
Sbjct: 328 EAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI 387
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G+ KA K D +FR M G+ N +YT L+ G + S +A +M+ G
Sbjct: 388 NGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVH 447
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTL 305
PN+ T+ L++G CK +E+A + L
Sbjct: 448 PNIMTYNTLLDGLCKNGKLEKAMVVFEYL 476
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 83/154 (53%), Gaps = 3/154 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A +IF M +P+ V +++G CK V + ++LF M +G + V YT +
Sbjct: 362 DEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL 421
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ G+ +A D+A+ +F++M S+G+ PN +Y L+ GLCK +L+ A + ++
Sbjct: 422 IHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM 481
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
P++ T+ + EG CK +E+ +L KG
Sbjct: 482 EPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKG 515
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA + M E + PN V +++D K+G + EA KLF M ++ P IV Y +++
Sbjct: 293 DASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLI 352
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G+ + D+A++IF M S P+ +Y L+ G CK ++ D E +M G
Sbjct: 353 NGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLV 412
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
N T+ L+ GF + + A+ K ++ G
Sbjct: 413 GNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDG 445
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 77/142 (54%), Gaps = 3/142 (2%)
Query: 154 QPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIV 210
Q + ++A +FK+M G+ PN + +LDGLCK+G +++A+ +F +++ P+I
Sbjct: 427 QASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIY 486
Query: 211 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 270
Y + EG KA K +D +F + G+ P+ +Y ++ G CK ++A+ ++M
Sbjct: 487 TYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKM 546
Query: 271 LEAGHSPNVTTFVDLVEGFCKE 292
E G P+ T+ L+ ++
Sbjct: 547 KEDGPLPDSGTYNTLIRAHLRD 568
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 78/158 (49%), Gaps = 3/158 (1%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+DA +F +M G+ P+ +++ LC G +A +L M E+ P +V + ++
Sbjct: 257 DDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSL 316
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++ + K K +A+++F +M I PN +Y L+ G C RL +A + M+
Sbjct: 317 IDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDC 376
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
P+V T+ L+ GFCK + + + + + +G N
Sbjct: 377 LPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGN 414
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 63/121 (52%)
Query: 190 VQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTV 249
+ EA+ LFG M + P IV ++ ++ K K D KM+ G+S N ++Y +
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 250 LVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
++ LC+ S+L A +M++ G+ P++ T L+ GFC I EA + ++E G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 310 F 310
+
Sbjct: 166 Y 166
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 71/153 (46%), Gaps = 3/153 (1%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A I KM + G P+ V ++L+G C + EA+ L M E G P+ V +T +V
Sbjct: 119 ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVH 178
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G + +KA +A + +M G P+ +Y ++ GLCK A +M +
Sbjct: 179 GLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEA 238
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
+V + +++ CK + +++A + KG
Sbjct: 239 DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGI 271
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 64/129 (49%), Gaps = 3/129 (2%)
Query: 166 KKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKA 222
+KM+ G+ N M++ LC+ + AL + G M + G P IV +++ G+
Sbjct: 89 EKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHG 148
Query: 223 HKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTF 282
++ +A + +M G P+ ++T LV GL + ++ +A M+ G P++ T+
Sbjct: 149 NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 208
Query: 283 VDLVEGFCK 291
++ G CK
Sbjct: 209 GAVINGLCK 217
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 82/148 (55%), Gaps = 6/148 (4%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E+A +++KM E G PN V ++DGLC++G EA ++ M G +P Y+++
Sbjct: 379 EEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSL 438
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++G+ K ++A +++++M G S N F Y+VL+ GLC R+++A +ML G
Sbjct: 439 MKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGI 498
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIK 303
P+ + +++G C GI A+K
Sbjct: 499 KPDTVAYSSIIKGLC---GIGSMDAALK 523
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 89/171 (52%), Gaps = 6/171 (3%)
Query: 158 PEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 214
P +A EI +M +G +PNA +++ G K GL +EA++++ M + G Y+
Sbjct: 413 PNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSV 472
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEML--- 271
+++G + +A ++ KM + GI P+ +Y+ +++GLC + A + EML
Sbjct: 473 LIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQE 532
Query: 272 EAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
E P+V T+ L++G C ++ I A + +++++G + FLN
Sbjct: 533 EPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLN 583
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 82/154 (53%), Gaps = 3/154 (1%)
Query: 160 DADEIFKKMKETGLIPN---AVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA + M+E G N ++ GL K+G +EA+ L+ M EKG P IV+Y+ +V
Sbjct: 345 DAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLV 404
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+G + K ++AK I +M ++G PNA++Y+ L++G K ++A + EM + G S
Sbjct: 405 DGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCS 464
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
N + L++G C ++EA ++ G
Sbjct: 465 RNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGI 498
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 73/152 (48%), Gaps = 7/152 (4%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
D +F K G +PN V ++ GLC G + +A+ L M IP V Y ++
Sbjct: 280 VDNMFLK----GCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLIN 335
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G K +A DA R+ M+ G N Y+VL+ GL K + ++A +M E G P
Sbjct: 336 GLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKP 395
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
N+ + LV+G C+E EAK + +I G
Sbjct: 396 NIVVYSVLVDGLCREGKPNEAKEILNRMIASG 427
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 83/159 (52%), Gaps = 3/159 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+ A + ++M + IPN V +++GL K +A++L M E+G IY+ +
Sbjct: 309 DKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVL 368
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ G K KA++A ++RKM G PN Y+VLV GLC+ + +A E M+ +G
Sbjct: 369 ISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGC 428
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNE 314
PN T+ L++GF K EEA K + + G + N+
Sbjct: 429 LPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNK 467
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 77/157 (49%), Gaps = 3/157 (1%)
Query: 161 ADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A E+F+ M E +P+ ++DGLCK+ + EA+ L M+ +G P VIY +++
Sbjct: 206 AIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLID 265
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G K ++ M G PN +Y L+ GLC +L A M+ + P
Sbjct: 266 GLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIP 325
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNE 314
N T+ L+ G K++ +A + ++ E+G+ +N+
Sbjct: 326 NDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQ 362
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 104/242 (42%), Gaps = 10/242 (4%)
Query: 84 SRSRFDGNRDEVEKTTMKSDLGFQGRNRPDVANQLGDSFLDKFKLGFDNKAGNSSETNQS 143
SR R + NR +E++ + + + PD A L +D+F+ K+ NS
Sbjct: 101 SRIRLE-NRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVII 159
Query: 144 EEATKSSNSNQPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLM 200
E E D + + PN ++ ++ LCK V A+++F M
Sbjct: 160 NEGLYHRGL------EFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGM 213
Query: 201 REKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRL 260
E+ +P+ Y +++G K + D+A + +MQS G SP+ Y VL+ GLCK L
Sbjct: 214 PERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDL 273
Query: 261 QDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDF 320
+ M G PN T+ L+ G C + +++A ++ ++ N+
Sbjct: 274 TRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTL 333
Query: 321 LN 322
+N
Sbjct: 334 IN 335
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 71/154 (46%), Gaps = 3/154 (1%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A + +M+ G P+ V ++DGLCK G + KL M KG +P V Y +
Sbjct: 239 DEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTL 298
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ G K D A + +M S+ PN +Y L+ GL K R DA M E G+
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY 358
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
N + L+ G KE EEA + + EKG
Sbjct: 359 HLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKG 392
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 83/158 (52%), Gaps = 3/158 (1%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A++ FK + E +PN V A++DGLCK G + A + M EK IP +V Y++++
Sbjct: 347 EAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMI 406
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
GY K ++A + RKM+ + PN F+Y ++ GL K + + A E EM G
Sbjct: 407 NGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVE 466
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNE 314
N LV + I+E KG +K ++ KG +++
Sbjct: 467 ENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQ 504
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 79/145 (54%), Gaps = 3/145 (2%)
Query: 164 IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
+ ++M+E + PN V ++D L K + + AL L+ M +G ++V+YT +++G
Sbjct: 281 LLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLF 340
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
KA +A++ F+ + + PN +YT LV GLCK L A +MLE PNV
Sbjct: 341 KAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVV 400
Query: 281 TFVDLVEGFCKEQGIEEAKGAIKTL 305
T+ ++ G+ K+ +EEA ++ +
Sbjct: 401 TYSSMINGYVKKGMLEEAVSLLRKM 425
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 3/164 (1%)
Query: 162 DEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEG 218
+E ++ M +G P+ V ++++ LCK G V E L M E P V YT +V+
Sbjct: 244 EEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDS 303
Query: 219 YTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPN 278
KA+ A ++ +M GI + YTVL+ GL K L++A + +LE PN
Sbjct: 304 LFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPN 363
Query: 279 VTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
V T+ LV+G CK + A+ I ++EK N +N
Sbjct: 364 VVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMIN 407
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 16/162 (9%)
Query: 165 FKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTK 221
+ M E G+ PN ++ GL GL++E K M+ +G P+ Y A++ G K
Sbjct: 736 YSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAK 795
Query: 222 AHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTT 281
+ I+ +M ++G+ P +Y VL+ ++ A E EM + G SPN +T
Sbjct: 796 IGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTST 855
Query: 282 FVDLVEGFC------------KEQGIEEAKGAIKTLI-EKGF 310
+ ++ G C K + EAKG +K ++ EKG+
Sbjct: 856 YCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMVEEKGY 897
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 65/125 (52%), Gaps = 4/125 (3%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
++DGL K G ++EA K F ++ E +P +V YTA+V+G KA A+ I +M
Sbjct: 334 VLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEK 393
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCK----EQG 294
+ PN +Y+ ++ G K L++A +M + PN T+ +++G K E
Sbjct: 394 SVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMA 453
Query: 295 IEEAK 299
IE +K
Sbjct: 454 IELSK 458
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 76/161 (47%), Gaps = 3/161 (1%)
Query: 156 AMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIY 212
M + A + M+ G IP+ V +++ G V++AL + +M E G P + Y
Sbjct: 692 GMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATY 751
Query: 213 TAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 272
++ G + A + + +M+S G+ P+ F+Y L+ G K ++ + EM+
Sbjct: 752 NTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIA 811
Query: 273 AGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
G P +T+ L+ F + +A+ +K + ++G + N
Sbjct: 812 DGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPN 852
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 69/134 (51%), Gaps = 3/134 (2%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A+ I +M E +IPN V +M++G K G+++EA+ L M ++ +P Y V++
Sbjct: 383 AEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVID 442
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G KA K + A + ++M+ G+ N + LV L + R+++ +M+ G +
Sbjct: 443 GLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTL 502
Query: 278 NVTTFVDLVEGFCK 291
+ + L++ F K
Sbjct: 503 DQINYTSLIDVFFK 516
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 3/129 (2%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
++ LCK G+ ++A + G M +G IP+ V + +++ GY A + M
Sbjct: 683 TLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEA 742
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
GISPN +Y +++GL +++ ++ EM G P+ T+ L+ G K I
Sbjct: 743 GISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAK---IGNM 799
Query: 299 KGAIKTLIE 307
KG++ E
Sbjct: 800 KGSMTIYCE 808
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 63/137 (45%), Gaps = 4/137 (2%)
Query: 187 DGLVQEALKL-FGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAF 245
+GLV + + L + M G P++ ++ + K + A + R + IS +
Sbjct: 106 NGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLR---NRVISIDTV 162
Query: 246 SYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTL 305
+Y ++ GLC+ +A++F EM++ G P+ ++ L++GFCK AK + +
Sbjct: 163 TYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEI 222
Query: 306 IEKGFAVNEKAVKDFLN 322
E + + + N
Sbjct: 223 SELNLITHTILLSSYYN 239
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
++ GLC+ GL EA + M + G +P+ V Y +++G+ K AK + ++
Sbjct: 166 TVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEIS-- 223
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCK 291
N ++T+L+ +++A+ +M+ +G P+V TF ++ CK
Sbjct: 224 --ELNLITHTILLSSYYNLHAIEEAYR---DMVMSGFDPDVVTFSSIINRLCK 271
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 71/158 (44%), Gaps = 3/158 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E +++ KMK G+ P+ ++ ++ LC++G ++EA+ + M P + Y
Sbjct: 590 EGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIF 649
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++ +K +AD + + S GI + Y L+ LCK + A +M G
Sbjct: 650 LDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGF 709
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
P+ TF L+ G+ + +A ++E G + N
Sbjct: 710 IPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPN 747
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 76/157 (48%), Gaps = 4/157 (2%)
Query: 168 MKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHK 224
M+E G+ + V+ ++ G+ K G V G MREKG P+I + ++ K
Sbjct: 530 MQERGMPWDVVSYNVLISGMLKFGKVGADWAYKG-MREKGIEPDIATFNIMMNSQRKQGD 588
Query: 225 ADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVD 284
++ +++ KM+S GI P+ S ++V LC+ ++++A +M+ PN+TT+
Sbjct: 589 SEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRI 648
Query: 285 LVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFL 321
++ K + + +TL+ G ++ + +
Sbjct: 649 FLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLI 685
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 89/169 (52%), Gaps = 6/169 (3%)
Query: 147 TKSSNSNQPAMPEDADE---IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLM 200
T SS N M + DE +F+ M PN V ++ G CK V E ++LF M
Sbjct: 363 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM 422
Query: 201 REKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRL 260
++G + V YT ++ G+ +A + D+A+ +F++M S+G+ P+ +Y++L+ GLC ++
Sbjct: 423 SQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKV 482
Query: 261 QDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
+ A + + P++ T+ ++EG CK +E+ +L KG
Sbjct: 483 ETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 531
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 3/153 (1%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA + M E + PN V A++D K+G + EA KL+ M ++ P+I Y++++
Sbjct: 309 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 368
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G+ + D+AK +F M S PN +Y L++G CK R+ + E EM + G
Sbjct: 369 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLV 428
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
N T+ L+ GF + + + A+ K ++ G
Sbjct: 429 GNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG 461
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 83/157 (52%), Gaps = 3/157 (1%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA +F +M G+ PN V +++ LC G +A +L M E+ P +V ++A++
Sbjct: 274 DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 333
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+ + K K +A++++ +M I P+ F+Y+ L+ G C RL +A M+
Sbjct: 334 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 393
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
PNV T+ L++GFCK + ++E + + ++G N
Sbjct: 394 PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGN 430
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 77/152 (50%), Gaps = 3/152 (1%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A + +M G P+ V +++GLCK G + AL L M + P +VIY ++
Sbjct: 204 EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTII 263
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+ +DA +F +M + GI PN +Y L++ LC R DA +M+E +
Sbjct: 264 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 323
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
PNV TF L++ F KE + EA+ +I++
Sbjct: 324 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 355
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 3/151 (1%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A + KKM++ + P V ++D LC V +AL LF M KG P +V Y +++
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
+ DA R+ M I+PN +++ L+ K +L +A + EM++ P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 359
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
++ T+ L+ GFC ++EAK + +I K
Sbjct: 360 DIFTYSSLINGFCMHDRLDEAKHMFELMISK 390
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 73/137 (53%), Gaps = 3/137 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A +FK+M G++P+ + +LDGLC +G V+ AL +F ++ P+I Y +
Sbjct: 448 DNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIM 507
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+EG KA K +D +F + G+ PN +YT ++ G C+ ++A EM E G
Sbjct: 508 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGP 567
Query: 276 SPNVTTFVDLVEGFCKE 292
P+ T+ L+ ++
Sbjct: 568 LPDSGTYNTLIRAHLRD 584
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 76/145 (52%), Gaps = 9/145 (6%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A++++ +M + + P+ ++++G C + EA +F LM K P +V Y ++
Sbjct: 344 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 403
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCK---CSRLQDAFEFCVEMLEA 273
+G+ KA + D+ +FR+M G+ N +YT L+ G + C Q F+ +M+
Sbjct: 404 KGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFK---QMVSD 460
Query: 274 GHSPNVTTFVDLVEGFCKEQGIEEA 298
G P++ T+ L++G C +E A
Sbjct: 461 GVLPDIMTYSILLDGLCNNGKVETA 485
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 66/121 (54%)
Query: 190 VQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTV 249
+ +A+ LFG M + P IV ++ ++ K +K D + +MQ+ GIS N ++Y++
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 250 LVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
L+ C+ S+L A +M++ G+ P++ T L+ GFC I +A + ++E G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 310 F 310
+
Sbjct: 182 Y 182
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 66/152 (43%), Gaps = 3/152 (1%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA + +M E G P++ ++ GL + EA+ L M KG P++V Y VV
Sbjct: 169 DAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVV 228
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G K D A + +KM+ I P Y ++ LC + DA EM G
Sbjct: 229 NGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIR 288
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
PNV T+ L+ C +A + +IE+
Sbjct: 289 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 320
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 3/156 (1%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A + KM + G P+ V ++L+G C + +A+ L G M E G P+ + ++
Sbjct: 135 ALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIH 194
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G + ++A +A + +M G P+ +Y ++V GLCK + A +M + P
Sbjct: 195 GLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEP 254
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
V + +++ C + + +A + KG N
Sbjct: 255 GVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPN 290
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 7/166 (4%)
Query: 166 KKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKA 222
++M+ G+ N +++ C+ + AL + M + G P+IV +++ G+
Sbjct: 105 EQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHG 164
Query: 223 HKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTF 282
++ DA + +M G P++F++ L+ GL + +R +A M+ G P++ T+
Sbjct: 165 NRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTY 224
Query: 283 VDLVEGFCKEQGIEEAKGAIKTL----IEKGFAVNEKAVKDFLNKK 324
+V G CK I+ A +K + IE G + + N K
Sbjct: 225 GIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYK 270
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 86/149 (57%), Gaps = 3/149 (2%)
Query: 164 IFKKMKETGLI--PNAVAM-LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
++++M E G+ P+A ++ + GLCK+G + E +F M KG+ P + IYT +++GY
Sbjct: 314 LYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYA 373
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
K+ +DA R+ +M G P+ +Y+V+V GLCK R+++A ++ G + N
Sbjct: 374 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSM 433
Query: 281 TFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
+ L++G K ++EA+ + + EKG
Sbjct: 434 FYSSLIDGLGKAGRVDEAERLFEEMSEKG 462
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 78/148 (52%), Gaps = 3/148 (2%)
Query: 164 IFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
+F+ M G PN ++DG K G V++A++L M ++G P++V Y+ VV G
Sbjct: 349 VFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLC 408
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
K + ++A F + +G++ N+ Y+ L+ GL K R+ +A EM E G + +
Sbjct: 409 KNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSY 468
Query: 281 TFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
+ L++ F K + ++EA K + E+
Sbjct: 469 CYNALIDAFTKHRKVDEAIALFKRMEEE 496
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 38/192 (19%)
Query: 157 MPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 213
M E+ +++KMKE G+ P +++GL V A ++F +M P+IV Y
Sbjct: 202 MVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYN 261
Query: 214 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQ--------------------- 252
+++GY KA + A R M++ G + +Y ++Q
Sbjct: 262 TMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEK 321
Query: 253 --------------GLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
GLCK +L + + M+ G PNV + L++G+ K +E+A
Sbjct: 322 GIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDA 381
Query: 299 KGAIKTLIEKGF 310
+ +I++GF
Sbjct: 382 IRLLHRMIDEGF 393
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 6/163 (3%)
Query: 156 AMPEDADEI------FKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEI 209
A+ +D D I KK + + A A++ K G+V+E L ++ M+E G P +
Sbjct: 163 ALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTL 222
Query: 210 VIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVE 269
Y ++ G A D A+R+F M+S I P+ +Y +++G CK + Q A E +
Sbjct: 223 YTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRD 282
Query: 270 MLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAV 312
M GH + T++ +++ + + + EKG V
Sbjct: 283 METRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQV 325
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 78/193 (40%), Gaps = 38/193 (19%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALK-------------------- 195
+ A+ +F+ M+ + P+ V M+ G CK G Q+A++
Sbjct: 239 DSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTM 298
Query: 196 ---------------LFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGI 240
L+ M EKG ++ V+ G K K ++ +F M G
Sbjct: 299 IQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGS 358
Query: 241 SPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKG 300
PN YTVL+ G K ++DA M++ G P+V T+ +V G CK +EEA
Sbjct: 359 KPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALD 418
Query: 301 AIKTLIEKGFAVN 313
T G A+N
Sbjct: 419 YFHTCRFDGLAIN 431
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 75/155 (48%), Gaps = 5/155 (3%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREK-GTIPEIVIYTA 214
++A+ +F++M E G ++ A++D K V EA+ LF M E+ G + YT
Sbjct: 449 DEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTI 508
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
++ G K H+ ++A +++ M GI+P A + L GLC ++ A + E+ G
Sbjct: 509 LLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMG 568
Query: 275 HSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
+ D++ CK I+EA + E+G
Sbjct: 569 VILDAAC-EDMINTLCKAGRIKEACKLADGITERG 602
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 98/177 (55%), Gaps = 8/177 (4%)
Query: 157 MPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 213
+ ++A +F K+KE PN + +L+G C+ + EA +++ M ++G P+IV +
Sbjct: 279 LGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHN 337
Query: 214 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 273
++EG ++ K DA ++F M+S G PN SYT++++ CK S ++ A E+ +M+++
Sbjct: 338 VMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS 397
Query: 274 GHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKA----VKDFLNKKKP 326
G P+ + L+ GF ++ ++ +K + EKG + K +K N+K P
Sbjct: 398 GLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMP 454
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 8/187 (4%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A I+ M + GL P+ VA ML+GL + +A+KLF +M+ KG P + YT ++
Sbjct: 316 EAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMI 375
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+ K + A F M +G+ P+A YT L+ G +L +E EM E GH
Sbjct: 376 RDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHP 435
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF-----AVNEKAVKDFLNKKKPFSPSV 331
P+ T+ L++ ++ E A +I+ N F+ + +V
Sbjct: 436 PDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAV 495
Query: 332 WEAIFGK 338
WE + K
Sbjct: 496 WEEMIKK 502
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 72/155 (46%), Gaps = 3/155 (1%)
Query: 160 DADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA ++F MK G PN M+ CK ++ A++ F M + G P+ +YT ++
Sbjct: 351 DAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLI 410
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G+ K D + ++MQ G P+ +Y L++ + + A +M++
Sbjct: 411 TGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIE 470
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
P++ TF +++ + + E + + +I+KG
Sbjct: 471 PSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGIC 505
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 70/155 (45%), Gaps = 3/155 (1%)
Query: 159 EDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A E F M ++GL P+A ++ G + +L M+EKG P+ Y A+
Sbjct: 385 ETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNAL 444
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++ + A RI+ KM N I P+ ++ ++++ + EM++ G
Sbjct: 445 IKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGI 504
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
P+ ++ L+ G E EA ++ +++KG
Sbjct: 505 CPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGM 539
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 82/154 (53%), Gaps = 3/154 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
ED E+F++M GL+ + V ++ GL DG A K+F M G P+I+ Y+ +
Sbjct: 417 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 476
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++G K + A +F MQ + I + + YT +++G+CK ++ D ++ + G
Sbjct: 477 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 536
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
PNV T+ ++ G C ++ ++EA +K + E G
Sbjct: 537 KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 570
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 78/137 (56%), Gaps = 3/137 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A ++FK+M G+ P+ + +LDGLC +G +++AL++F M++ +I IYT +
Sbjct: 452 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 511
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+EG KA K DD +F + G+ PN +Y ++ GLC LQ+A+ +M E G
Sbjct: 512 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 571
Query: 276 SPNVTTFVDLVEGFCKE 292
PN T+ L+ ++
Sbjct: 572 LPNSGTYNTLIRAHLRD 588
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 87/178 (48%), Gaps = 12/178 (6%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A + +M + G PN V +++GLCK G AL L M ++VI+ ++
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTII 267
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+ K DDA +F++M++ GI PN +Y+ L+ LC R DA + +M+E +
Sbjct: 268 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 327
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF---------AVNEKAVKDFLNKKK 325
PN+ TF L++ F KE EA+ +I++ VN + D L+K K
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAK 385
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 83/159 (52%), Gaps = 9/159 (5%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+DA +FK+M+ G+ PN V +++ LC G +A +L M EK P +V + A+
Sbjct: 277 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 336
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDA---FEFCVEMLE 272
++ + K K +A++++ M I P+ F+Y LV G C RL A FEF M+
Sbjct: 337 IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEF---MVS 393
Query: 273 AGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
P+V T+ L++GFCK + +E+ + + +G
Sbjct: 394 KDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 432
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 82/154 (53%), Gaps = 3/154 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+ A ++F+ M P+ V ++ G CK V++ +LF M +G + + V YT +
Sbjct: 382 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 441
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++G D+A+++F++M S+G+ P+ +Y++L+ GLC +L+ A E M ++
Sbjct: 442 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
++ + ++EG CK +++ +L KG
Sbjct: 502 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 535
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 3/153 (1%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA ++ M E + PN V A++D K+G EA KL+ M ++ P+I Y ++V
Sbjct: 313 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLV 372
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G+ + D AK++F M S P+ +Y L++G CK R++D E EM G
Sbjct: 373 NGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 432
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
+ T+ L++G + + A+ K ++ G
Sbjct: 433 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 465
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 78/145 (53%), Gaps = 9/145 (6%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A++++ M + + P+ ++++G C + +A ++F M K P++V Y ++
Sbjct: 348 EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 407
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCK---CSRLQDAFEFCVEMLEA 273
+G+ K+ + +D +FR+M G+ + +YT L+QGL C Q F+ +M+
Sbjct: 408 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK---QMVSD 464
Query: 274 GHSPNVTTFVDLVEGFCKEQGIEEA 298
G P++ T+ L++G C +E+A
Sbjct: 465 GVPPDIMTYSILLDGLCNNGKLEKA 489
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 3/152 (1%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA + +M E G P+ + ++ GL EA+ L M ++G P +V Y VV
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G K D A + KM++ I + + ++ LCK + DA EM G
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
PNV T+ L+ C +A + +IEK
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 324
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 3/153 (1%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A + KM + G P+ V ++L+G C + +A+ L M E G P+ + +T ++
Sbjct: 139 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 198
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G +KA +A + +M G PN +Y V+V GLCK A +M A
Sbjct: 199 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEA 258
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
+V F +++ CK + +++A K + KG
Sbjct: 259 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 291
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 61/121 (50%)
Query: 190 VQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTV 249
+ +A+ LFG M + +P IV + ++ K K D + KMQ I ++Y +
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 250 LVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
L+ C+ S++ A +M++ G+ P++ T L+ G+C + I +A + ++E G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 310 F 310
+
Sbjct: 186 Y 186
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 56/112 (50%)
Query: 180 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 239
+++ C+ + AL L G M + G P IV ++++ GY + DA + +M G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 240 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCK 291
P+ ++T L+ GL ++ +A M++ G PN+ T+ +V G CK
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 237
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 84/207 (40%), Gaps = 10/207 (4%)
Query: 106 FQGRNRPDVANQLGDSFLDKFKLGFDNKAGNSSETNQSEEATKSSNSNQPAMPEDADEIF 165
QG+ P +A S +D + + +A +S + E N +DA +F
Sbjct: 21 LQGKGNPRIA----PSSIDLCGMCYWGRAFSSGSGDYREIL---RNGLHDMKLDDAIGLF 73
Query: 166 KKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKA 222
M ++ +P+ V +L + K + L M+ + + Y ++ + +
Sbjct: 74 GGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRR 133
Query: 223 HKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTF 282
+ A + KM G P+ + + L+ G C R+ DA +M+E G+ P+ TF
Sbjct: 134 SQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITF 193
Query: 283 VDLVEGFCKEQGIEEAKGAIKTLIEKG 309
L+ G EA + ++++G
Sbjct: 194 TTLIHGLFLHNKASEAVALVDRMVQRG 220
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 82/156 (52%), Gaps = 4/156 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFG-LMREKGTIPEIVIYTA 214
++A E+ M + + N V +++GLCK G +A +L ++ EK + Y +
Sbjct: 530 QNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNS 589
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
+++G+ K + D A + +M NGISPN +YT L+ GLCK +R+ A E EM G
Sbjct: 590 IIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKG 649
Query: 275 HSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
++ + L++GFCK +E A L+E+G
Sbjct: 650 VKLDIPAYGALIDGFCKRSNMESASALFSELLEEGL 685
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 72/131 (54%), Gaps = 3/131 (2%)
Query: 161 ADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A +++KKM + GL + ++DGL KDG + A +L+ M+ G +P+ +IYT +V
Sbjct: 708 ALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVN 767
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G +K + ++F +M+ N ++PN Y ++ G + L +AF EML+ G P
Sbjct: 768 GLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILP 827
Query: 278 NVTTFVDLVEG 288
+ TF LV G
Sbjct: 828 DGATFDILVSG 838
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 2/152 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA--MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
E+A ++F + ETGL V +L LCK G EA +L M +G P +V Y V+
Sbjct: 426 EEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVM 485
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G+ + D A+ +F + G+ PN ++Y++L+ G + Q+A E M +
Sbjct: 486 LGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIE 545
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
N + ++ G CK +A+ + +IE+
Sbjct: 546 VNGVVYQTIINGLCKVGQTSKARELLANMIEE 577
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 82/153 (53%), Gaps = 4/153 (2%)
Query: 164 IFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
+F KM++ G PN+V +++ K+G +++AL+ + M G P + +++G+
Sbjct: 361 LFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWL 420
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
K K ++A ++F + G++ N F ++ LCK + +A E +M G PNV
Sbjct: 421 KGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVV 479
Query: 281 TFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
++ +++ G C+++ ++ A+ ++EKG N
Sbjct: 480 SYNNVMLGHCRQKNMDLARIVFSNILEKGLKPN 512
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 4/167 (2%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A E +KKM+ GL P+ ++ G K +EALKLF E G + + + +
Sbjct: 391 EKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETG-LANVFVCNTI 449
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ K K D+A + KM+S GI PN SY ++ G C+ + A +LE G
Sbjct: 450 LSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGL 509
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
PN T+ L++G + + A + + VN + +N
Sbjct: 510 KPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIIN 556
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 71/131 (54%), Gaps = 3/131 (2%)
Query: 165 FKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTK 221
+++M G+ PN + ++++GLCK+ + +AL++ M+ KG +I Y A+++G+ K
Sbjct: 607 YEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCK 666
Query: 222 AHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTT 281
+ A +F ++ G++P+ Y L+ G + A + +ML+ G ++ T
Sbjct: 667 RSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGT 726
Query: 282 FVDLVEGFCKE 292
+ L++G K+
Sbjct: 727 YTTLIDGLLKD 737
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 3/137 (2%)
Query: 159 EDADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+ A E+ +MK G+ IP A++DG CK ++ A LF + E+G P IY ++
Sbjct: 636 DQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSL 695
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ G+ A +++KM +G+ + +YT L+ GL K L A E EM G
Sbjct: 696 ISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGL 755
Query: 276 SPNVTTFVDLVEGFCKE 292
P+ + +V G K+
Sbjct: 756 VPDEIIYTVIVNGLSKK 772
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 67/132 (50%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
+++DG K+G + A+ + M G P ++ YT+++ G K ++ D A + +M++
Sbjct: 589 SIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNK 648
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
G+ + +Y L+ G CK S ++ A E+LE G +P+ + L+ GF + A
Sbjct: 649 GVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAA 708
Query: 299 KGAIKTLIEKGF 310
K +++ G
Sbjct: 709 LDLYKKMLKDGL 720
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 76/155 (49%), Gaps = 3/155 (1%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A +F ++ E GL P+ +++ G G + AL L+ M + G ++ YT +
Sbjct: 671 ESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTL 730
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++G K A ++ +MQ+ G+ P+ YTV+V GL K + + EM +
Sbjct: 731 IDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNV 790
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
+PNV + ++ G +E ++EA +++KG
Sbjct: 791 TPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGI 825
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 79/155 (50%), Gaps = 4/155 (2%)
Query: 161 ADEIFKKMKETGL-IPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
A+ + ++MKE L +P+ +++ K G + +A++L M G +V T+++
Sbjct: 287 ANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLI 346
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G+ K + A +F KM+ G SPN+ +++VL++ K ++ A EF +M G +
Sbjct: 347 TGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLT 406
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
P+V +++G+ K Q EEA E G A
Sbjct: 407 PSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA 441
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 39/178 (21%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVI----- 211
+A E++ +M G+ + V ++ ++ EAL++ E+G P+ ++
Sbjct: 216 EAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAV 275
Query: 212 -------------------------------YTAVVEGYTKAHKADDAKRIFRKMQSNGI 240
YT+V+ K DDA R+ +M S+GI
Sbjct: 276 QACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGI 335
Query: 241 SPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
S N + T L+ G CK + L A +M + G SPN TF L+E F K +E+A
Sbjct: 336 SMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKA 393
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 82/154 (53%), Gaps = 3/154 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
ED E+F++M GL+ + V ++ GL DG A K+F M G P+I+ Y+ +
Sbjct: 342 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 401
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++G K + A +F MQ + I + + YT +++G+CK ++ D ++ + G
Sbjct: 402 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 461
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
PNV T+ ++ G C ++ ++EA +K + E G
Sbjct: 462 KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 495
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 78/137 (56%), Gaps = 3/137 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A ++FK+M G+ P+ + +LDGLC +G +++AL++F M++ +I IYT +
Sbjct: 377 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 436
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+EG KA K DD +F + G+ PN +Y ++ GLC LQ+A+ +M E G
Sbjct: 437 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 496
Query: 276 SPNVTTFVDLVEGFCKE 292
P+ T+ L+ ++
Sbjct: 497 LPDSGTYNTLIRAHLRD 513
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 3/152 (1%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A + +M + G PN V +++GLCK G + A L M ++VI+ ++
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+ K DDA +F++M++ GI PN +Y+ L+ LC R DA + +M+E +
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
PN+ TF L++ F KE EA+ +I++
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR 284
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 82/159 (51%), Gaps = 9/159 (5%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+DA +FK+M+ G+ PN V +++ LC G +A +L M EK P +V + A+
Sbjct: 202 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 261
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDA---FEFCVEMLE 272
++ + K K +A+++ M I P+ F+Y L+ G C RL A FEF M+
Sbjct: 262 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEF---MVS 318
Query: 273 AGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
P++ T+ L++GFCK + +E+ + + +G
Sbjct: 319 KDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 357
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 72/131 (54%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
++ G CK V++ +LF M +G + + V YT +++G D+A+++F++M S+
Sbjct: 330 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD 389
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
G+ P+ +Y++L+ GLC +L+ A E M ++ ++ + ++EG CK +++
Sbjct: 390 GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 449
Query: 299 KGAIKTLIEKG 309
+L KG
Sbjct: 450 WDLFCSLSLKG 460
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA ++ M E + PN V A++D K+G EA KL M ++ P+I Y +++
Sbjct: 238 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 297
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G+ + D AK++F M S P+ +Y L++G CK R++D E EM G
Sbjct: 298 NGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 357
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
+ T+ L++G + + A+ K ++ G
Sbjct: 358 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 390
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A + KM + G P+ V ++L+G C + +A+ L M E G P+ + +T ++
Sbjct: 64 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 123
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G +KA +A + +M G PN +Y V+V GLCK + AF +M A
Sbjct: 124 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA 183
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
+V F +++ CK + +++A K + KG
Sbjct: 184 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 216
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 66/123 (53%), Gaps = 6/123 (4%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
++++G C + +A ++F M K P++ Y +++G+ K+ + +D +FR+M
Sbjct: 295 SLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHR 354
Query: 239 GISPNAFSYTVLVQGLCK---CSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGI 295
G+ + +YT L+QGL C Q F+ +M+ G P++ T+ L++G C +
Sbjct: 355 GLVGDTVTYTTLIQGLFHDGDCDNAQKVFK---QMVSDGVPPDIMTYSILLDGLCNNGKL 411
Query: 296 EEA 298
E+A
Sbjct: 412 EKA 414
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 3/152 (1%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA + +M E G P+ + ++ GL EA+ L M ++G P +V Y VV
Sbjct: 98 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 157
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G K D A + KM++ I + + ++ LCK + DA EM G
Sbjct: 158 NGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 217
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
PNV T+ L+ C +A + +IEK
Sbjct: 218 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 249
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 3/136 (2%)
Query: 166 KKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKA 222
+KM+ G+ N +++ C+ + AL L G M + G P IV ++++ GY
Sbjct: 34 EKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 93
Query: 223 HKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTF 282
+ DA + +M G P+ ++T L+ GL ++ +A M++ G PN+ T+
Sbjct: 94 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 153
Query: 283 VDLVEGFCKEQGIEEA 298
+V G CK I+ A
Sbjct: 154 GVVVNGLCKRGDIDLA 169
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 54/105 (51%)
Query: 206 IPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFE 265
+P I + ++ K K D + KMQ GIS N ++Y +L+ C+ S++ A
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 266 FCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
+M++ G+ P++ T L+ G+C + I +A + ++E G+
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 111
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 48/110 (43%)
Query: 200 MREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSR 259
M+ G + Y ++ + + + A + KM G P+ + + L+ G C R
Sbjct: 36 MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 95
Query: 260 LQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
+ DA +M+E G+ P+ TF L+ G EA + ++++G
Sbjct: 96 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 145
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 98/195 (50%), Gaps = 39/195 (20%)
Query: 157 MPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 213
+ +A F +M++ G +P+ +A ++ L + EA F ++++ P++++YT
Sbjct: 201 LASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFE-PDVIVYT 259
Query: 214 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 273
+V G+ +A + +A+++F++M+ GI PN ++Y++++ LC+C ++ A + +ML++
Sbjct: 260 NLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDS 319
Query: 274 GHSPNVTTFVD-----------------------------------LVEGFCKEQGIEEA 298
G +PN TF + L+E C+++ +E A
Sbjct: 320 GCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENA 379
Query: 299 KGAIKTLIEKGFAVN 313
+ T+I+K VN
Sbjct: 380 VKVLNTMIKKKCEVN 394
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 72/168 (42%), Gaps = 38/168 (22%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A+++FK+MK G+ PN ++D LC+ G + A +F M + G P + + ++
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLM 332
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEF--------C- 267
+ KA + + +++ +M+ G P+ +Y L++ C+ L++A + C
Sbjct: 333 RVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCE 392
Query: 268 --------------------------VEMLEAGHSPNVTTFVDLVEGF 289
+M+EA PN T+ L+ F
Sbjct: 393 VNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMF 440
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 64/153 (41%), Gaps = 3/153 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E +++ +MK+ G P+ + +++ C+D ++ A+K+ M +K + +
Sbjct: 342 EKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTI 401
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
K + A R++ KM PN +Y +L++ + EM +
Sbjct: 402 FRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEV 461
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
PNV T+ LV FC A K ++E+
Sbjct: 462 EPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEE 494
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 97/177 (54%), Gaps = 8/177 (4%)
Query: 157 MPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 213
+ ++A +F K+KE PN + +L+G C+ + EA +++ M + G P+IV +
Sbjct: 279 LGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHN 337
Query: 214 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 273
++EG ++ K DA ++F M+S G PN SYT++++ CK S ++ A E+ +M+++
Sbjct: 338 VMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS 397
Query: 274 GHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKA----VKDFLNKKKP 326
G P+ + L+ GF ++ ++ +K + EKG + K +K N+K P
Sbjct: 398 GLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMP 454
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 70/155 (45%), Gaps = 3/155 (1%)
Query: 160 DADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA ++F MK G PN M+ CK ++ A++ F M + G P+ +YT ++
Sbjct: 351 DAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLI 410
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G+ K D + ++MQ G P+ +Y L++ + + +M++
Sbjct: 411 TGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIE 470
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
P++ TF +++ + + E + +I+KG
Sbjct: 471 PSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGIC 505
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 97/177 (54%), Gaps = 8/177 (4%)
Query: 157 MPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 213
+ ++A +F K+KE PN + +L+G C+ + EA +++ M + G P+IV +
Sbjct: 278 LGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHN 336
Query: 214 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 273
++EG ++ K DA ++F M+S G PN SYT++++ CK S ++ A E+ +M+++
Sbjct: 337 VMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS 396
Query: 274 GHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKA----VKDFLNKKKP 326
G P+ + L+ GF ++ ++ +K + EKG + K +K N+K P
Sbjct: 397 GLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMP 453
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 70/155 (45%), Gaps = 3/155 (1%)
Query: 160 DADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA ++F MK G PN M+ CK ++ A++ F M + G P+ +YT ++
Sbjct: 350 DAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLI 409
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G+ K D + ++MQ G P+ +Y L++ + + +M++
Sbjct: 410 TGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIE 469
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
P++ TF +++ + + E + +I+KG
Sbjct: 470 PSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGIC 504
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 76/142 (53%), Gaps = 3/142 (2%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A + KM+ET + P+ V A++D LCKDG +A LF M EKG P + Y +++
Sbjct: 280 ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 339
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G+ + DA+R+ R M I+P+ ++ L+ K +L +A + C EML P
Sbjct: 340 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 399
Query: 278 NVTTFVDLVEGFCKEQGIEEAK 299
+ T+ ++ GFCK ++AK
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDAK 421
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 3/152 (1%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A +F +M E GL P + +++GLC +G V EA L M KG ++V Y +V
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G K A + KM+ I P+ Y+ ++ LCK DA EMLE G +
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
PNV T+ +++GFC +A+ ++ +IE+
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER 360
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 78/152 (51%), Gaps = 3/152 (1%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A + KM GL + V +++G+CK G + AL L M E P++VIY+A++
Sbjct: 244 EAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAII 303
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+ K DA+ +F +M GI+PN F+Y ++ G C R DA +M+E +
Sbjct: 304 DRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREIN 363
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
P+V TF L+ KE + EA+ ++ +
Sbjct: 364 PDVLTFNALISASVKEGKLFEAEKLCDEMLHR 395
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 85/161 (52%), Gaps = 3/161 (1%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A ++F++M G+ P+ + +L G C++ ++EAL+LF +++ + V Y ++
Sbjct: 486 AQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIH 545
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G K K D+A +F + +G+ P+ +Y V++ G C S + DA +M + GH P
Sbjct: 546 GMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEP 605
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVK 318
+ +T+ L+ G K I+++ I + GF+ + +K
Sbjct: 606 DNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK 646
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 73/142 (51%), Gaps = 7/142 (4%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A+++ +M + P+ V +M+ G CK +A +F LM P++V + ++
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTII 439
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+ Y +A + D+ ++ R++ G+ N +Y L+ G C+ L A + EM+ G
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499
Query: 277 PNVTTFVDLVEGFCKEQGIEEA 298
P+ T L+ GFC+ + +EEA
Sbjct: 500 PDTITCNILLYGFCENEKLEEA 521
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 7/155 (4%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA + + M E + P+ + A++ K+G + EA KL M + P+ V Y +++
Sbjct: 349 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G+ K ++ DDAK +F M S P+ ++ ++ C+ R+ + + E+ G
Sbjct: 409 YGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 464
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
N TT+ L+ GFC+ + A+ + +I G
Sbjct: 465 ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 18/167 (10%)
Query: 165 FKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTI--------------- 206
F K+ + G P+ V +L GLC + + EAL LFG M E G +
Sbjct: 164 FGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLT 223
Query: 207 PEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEF 266
P ++ + ++ G + +A + KM G+ + +Y +V G+CK + A
Sbjct: 224 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283
Query: 267 CVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
+M E P+V + +++ CK+ +A+ ++EKG A N
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPN 330
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 71/139 (51%), Gaps = 3/139 (2%)
Query: 163 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 219
++ +++ GL+ N ++ G C+ + A LF M G P+ + ++ G+
Sbjct: 453 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 512
Query: 220 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNV 279
+ K ++A +F +Q + I + +Y +++ G+CK S++ +A++ + G P+V
Sbjct: 513 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 572
Query: 280 TTFVDLVEGFCKEQGIEEA 298
T+ ++ GFC + I +A
Sbjct: 573 QTYNVMISGFCGKSAISDA 591
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 3/136 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E+A E+F+ ++ + + + VA ++ G+CK V EA LF + G P++ Y +
Sbjct: 519 EEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVM 578
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ G+ DA +F KM+ NG P+ +Y L++G K + + E EM G
Sbjct: 579 ISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGF 638
Query: 276 SPNVTTFVDLVEGFCK 291
S + T E C+
Sbjct: 639 SGDAFTIKMAEEIICR 654
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 57/121 (47%)
Query: 190 VQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTV 249
+ +A+ F M V V+ + + ++ D A ++RKM+ I N +S+ +
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 250 LVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
L++ C C +L + ++ + G P+V TF L+ G C E I EA ++E G
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 310 F 310
F
Sbjct: 207 F 207
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 69/143 (48%), Gaps = 7/143 (4%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+DA +F M P+ V ++D C+ V E ++L + +G + Y +
Sbjct: 418 DDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 473
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ G+ + + A+ +F++M S+G+ P+ + +L+ G C+ +L++A E + +
Sbjct: 474 IHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKI 533
Query: 276 SPNVTTFVDLVEGFCKEQGIEEA 298
+ + ++ G CK ++EA
Sbjct: 534 DLDTVAYNIIIHGMCKGSKVDEA 556
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 15/136 (11%)
Query: 193 ALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQ 252
A+ L+ M + I + +++ + HK + F K+ G P+ ++ L+
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184
Query: 253 GLCKCSRLQDA---FEFCVE------------MLEAGHSPNVTTFVDLVEGFCKEQGIEE 297
GLC R+ +A F + VE M+E G +P V TF L+ G C E + E
Sbjct: 185 GLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLE 244
Query: 298 AKGAIKTLIEKGFAVN 313
A + ++ KG ++
Sbjct: 245 AAALVNKMVGKGLHID 260
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 82/165 (49%), Gaps = 3/165 (1%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A + +MK G+ + M+DGLCK+G + EA+ L M + G P+IV Y+A++
Sbjct: 427 ARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALIN 486
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G+ K + AK I ++ G+SPN Y+ L+ C+ L++A M+ GH+
Sbjct: 487 GFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTR 546
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
+ TF LV CK + EA+ ++ + G N + +N
Sbjct: 547 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLIN 591
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 82/156 (52%), Gaps = 3/156 (1%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A ++ +M GL PN V A++DG +G +EALK+F +M KG P V Y +++
Sbjct: 357 ASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLD 416
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G K + D A+ + +M+ NG+ +YT ++ GLCK L +A EM + G P
Sbjct: 417 GLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDP 476
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
++ T+ L+ GFCK + AK + + G + N
Sbjct: 477 DIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPN 512
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 77/154 (50%), Gaps = 3/154 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A ++F M+ GL P+ V+ +LDGLCK+ A + M+ G + YT +
Sbjct: 390 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 449
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++G K D+A + +M +GI P+ +Y+ L+ G CK R + A E + G
Sbjct: 450 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 509
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
SPN + L+ C+ ++EA + +I +G
Sbjct: 510 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEG 543
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 73/148 (49%), Gaps = 3/148 (2%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A EI ++ GL PN + ++ C+ G ++EA++++ M +G + + +V
Sbjct: 497 AKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVT 556
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
KA K +A+ R M S+GI PN S+ L+ G AF EM + GH P
Sbjct: 557 SLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHP 616
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTL 305
T+ L++G CK + EA+ +K+L
Sbjct: 617 TFFTYGSLLKGLCKGGHLREAEKFLKSL 644
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 78/175 (44%), Gaps = 6/175 (3%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E + + +KM+++G P V +L CK G + A++L M+ KG ++ Y +
Sbjct: 250 EKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNML 309
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ ++++ + R M+ I PN +Y L+ G ++ A + EML G
Sbjct: 310 IHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGL 369
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA---VNEKAVKDFLNKKKPF 327
SPN TF L++G E +EA + KG V+ + D L K F
Sbjct: 370 SPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEF 424
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Query: 164 IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
+ + M++ + PN V +++G +G V A +L M G P V + A+++G+
Sbjct: 325 LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHI 384
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
+A ++F M++ G++P+ SY VL+ GLCK + A F + M G
Sbjct: 385 SEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 444
Query: 281 TFVDLVEGFCKEQGIEEA 298
T+ +++G CK ++EA
Sbjct: 445 TYTGMIDGLCKNGFLDEA 462
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 165 FKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTK 221
K+M + + P+ +++ LC +G +++ L M + G P IV Y V+ Y K
Sbjct: 221 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 280
Query: 222 AHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTT 281
+ A + M+S G+ + +Y +L+ LC+ +R+ + +M + PN T
Sbjct: 281 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 340
Query: 282 FVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNE 314
+ L+ GF E + A + ++ G + N
Sbjct: 341 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNH 373
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 70/162 (43%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
++ LCK G V EA + M G +P V + ++ GY + + A +F +M
Sbjct: 553 VLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKV 612
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
G P F+Y L++GLCK L++A +F + + + + L+ CK + +A
Sbjct: 613 GHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKA 672
Query: 299 KGAIKTLIEKGFAVNEKAVKDFLNKKKPFSPSVWEAIFGKKA 340
++++ + ++ +V +F K+A
Sbjct: 673 VSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEA 714
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 64/148 (43%), Gaps = 3/148 (2%)
Query: 175 PNAV--AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIF 232
PN AM+ L K G EA L M + +P I +T ++ K +A +
Sbjct: 968 PNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELR 1027
Query: 233 RKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEG-FCK 291
M + G+ + SY VL+ GLC + AFE EM G N TT+ L+ G +
Sbjct: 1028 VVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLAR 1087
Query: 292 EQGIEEAKGAIKTLIEKGFAVNEKAVKD 319
E A +K L+ +GF + +D
Sbjct: 1088 ETAFSGADIILKDLLARGFITSMSLSQD 1115
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 80/177 (45%), Gaps = 7/177 (3%)
Query: 159 EDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+++ + +M + G+ P + + +++GLC+ G ++ A + M P V +A+
Sbjct: 916 QESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAM 975
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
V K KAD+A + R M + P S+T L+ CK + +A E V M G
Sbjct: 976 VRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGL 1035
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN----EKAVKDFLNKKKPFS 328
++ ++ L+ G C + + A + + GF N + ++ L ++ FS
Sbjct: 1036 KLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFS 1092
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 69/155 (44%), Gaps = 3/155 (1%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A E+ MK G+ + ++ LC+ + + L MR++ P V Y ++
Sbjct: 287 AIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLIN 346
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G++ K A ++ +M S G+SPN ++ L+ G ++A + M G +P
Sbjct: 347 GFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTP 406
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAV 312
+ ++ L++G CK + A+G + G V
Sbjct: 407 SEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCV 441
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 4/135 (2%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A +F +M + G P ++L GLCK G ++EA K + + V+Y ++
Sbjct: 602 AFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLT 661
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS- 276
K+ A +F +M I P++++YT L+ GLC+ + A F E G+
Sbjct: 662 AMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVL 721
Query: 277 PNVTTFVDLVEGFCK 291
PN + V+G K
Sbjct: 722 PNKVMYTCFVDGMFK 736
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 68/154 (44%), Gaps = 3/154 (1%)
Query: 173 LIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAK 229
++PN V +DG+ K G + + M G P+IV A+++GY++ K +
Sbjct: 720 VLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTN 779
Query: 230 RIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGF 289
+ +M + PN +Y +L+ G K + +F ++ G P+ T LV G
Sbjct: 780 DLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGI 839
Query: 290 CKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLNK 323
C+ +E +K I +G V+ ++K
Sbjct: 840 CESNMLEIGLKILKAFICRGVEVDRYTFNMLISK 873
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 75/171 (43%), Gaps = 6/171 (3%)
Query: 166 KKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKA 222
++M G P+ V AM+DG + G +++ L M + P + Y ++ GY+K
Sbjct: 748 EQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKR 807
Query: 223 HKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTF 282
+ ++R + NGI P+ + LV G+C+ + L+ + + G + TF
Sbjct: 808 KDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTF 867
Query: 283 VDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNE---KAVKDFLNKKKPFSPS 330
L+ C I A +K + G ++++ A+ LN+ F S
Sbjct: 868 NMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQES 918
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/172 (19%), Positives = 70/172 (40%), Gaps = 3/172 (1%)
Query: 154 QPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIV 210
+ M +D+ EIF+ M G P+ A+L + K G M ++ P++
Sbjct: 175 REGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVA 234
Query: 211 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 270
+ ++ + + + +KM+ +G +P +Y ++ CK R + A E M
Sbjct: 235 TFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHM 294
Query: 271 LEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
G +V T+ L+ C+ I + ++ + ++ NE +N
Sbjct: 295 KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLIN 346
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 80/159 (50%), Gaps = 3/159 (1%)
Query: 158 PEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 214
P A MKE G+ P+ + ++DGL + G ++ M + G P++V YT
Sbjct: 305 PLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTV 364
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
++ GY + + D AK +FR+M G PN F+Y +++GLC ++A EM G
Sbjct: 365 MITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRG 424
Query: 275 HSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
+PN + LV K + EA+ I+ +++KG V+
Sbjct: 425 CNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVH 463
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 3/151 (1%)
Query: 162 DEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEG 218
D +F +M G P++ +L L K AL M+E G P ++ YT +++G
Sbjct: 274 DRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDG 333
Query: 219 YTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPN 278
++A + K +M G P+ YTV++ G L A E EM G PN
Sbjct: 334 LSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPN 393
Query: 279 VTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
V T+ ++ G C EA +K + +G
Sbjct: 394 VFTYNSMIRGLCMAGEFREACWLLKEMESRG 424
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%)
Query: 200 MREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSR 259
M E G P+++ Y ++ + K D R+F +M +G SP++++Y +L+ L K ++
Sbjct: 245 MLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNK 304
Query: 260 LQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
A M E G P+V + L++G + +E K + +++ G
Sbjct: 305 PLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAG 354
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 81/143 (56%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
+LD L K V+E L + G + + G +P +V YT +V+G ++ + RI M+ +
Sbjct: 551 VILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLS 610
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
G PN + YT+++ GLC+ R+++A + M ++G SPN T+ +V+G+ ++ A
Sbjct: 611 GCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRA 670
Query: 299 KGAIKTLIEKGFAVNEKAVKDFL 321
++ ++E+G+ +N++ L
Sbjct: 671 LETVRAMVERGYELNDRIYSSLL 693
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 85/159 (53%), Gaps = 3/159 (1%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E+A+ + +KM + + P+ + A+++G CKDG V A +L +M ++ P + + +
Sbjct: 353 EEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNEL 412
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+EG + K A + ++M NG+SP+ SY VL+ GLC+ + A++ M
Sbjct: 413 MEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDI 472
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNE 314
P+ TF ++ FCK+ + A + ++ KG +++E
Sbjct: 473 EPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDE 511
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 13/209 (6%)
Query: 116 NQLGDSFLDKFKLGFDNKAGNSSETNQSEEATKSSNSNQPAMP----------EDADEIF 165
+ +G S L F G + + S+E T + NS ++ E+A +
Sbjct: 230 SHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLK 289
Query: 166 KKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKA 222
+M E G P+ ++ LC GL+ +A LF M +G P + YT +++G +
Sbjct: 290 DQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRD 349
Query: 223 HKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTF 282
K ++A + RKM + I P+ +Y L+ G CK R+ AFE M + PNV TF
Sbjct: 350 GKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTF 409
Query: 283 VDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
+L+EG C+ +A +K +++ G +
Sbjct: 410 NELMEGLCRVGKPYKAVHLLKRMLDNGLS 438
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 79/140 (56%), Gaps = 4/140 (2%)
Query: 164 IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
+ K+ + GL+P+ V ++DGL + G + + ++ LM+ G +P + YT ++ G
Sbjct: 568 MLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLC 627
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
+ + ++A+++ MQ +G+SPN +YTV+V+G +L A E M+E G+ N
Sbjct: 628 QFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDR 687
Query: 281 TFVDLVEGFCKEQ-GIEEAK 299
+ L++GF Q GI+ ++
Sbjct: 688 IYSSLLQGFVLSQKGIDNSE 707
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 76/153 (49%), Gaps = 3/153 (1%)
Query: 156 AMPEDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIY 212
+ + A +F +M G PN ++DGLC+DG ++EA + M + P ++ Y
Sbjct: 315 GLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITY 374
Query: 213 TAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 272
A++ GY K + A + M+ PN ++ L++GLC+ + A ML+
Sbjct: 375 NALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLD 434
Query: 273 AGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTL 305
G SP++ ++ L++G C+E + A + ++
Sbjct: 435 NGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSM 467
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 77/149 (51%), Gaps = 4/149 (2%)
Query: 165 FKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTK 221
+++M+ G + + +++ LCK+G + A + + G + + I T+++ G+ +
Sbjct: 183 YRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCR 242
Query: 222 AHKADDAKRIFRKMQSN-GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
DA ++F M +PN+ SY++L+ GLC+ RL++AF +M E G P+
Sbjct: 243 GLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTR 302
Query: 281 TFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
T+ L++ C I++A +I +G
Sbjct: 303 TYTVLIKALCDRGLIDKAFNLFDEMIPRG 331
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 75/177 (42%), Gaps = 40/177 (22%)
Query: 158 PEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 214
P A + K+M + GL P+ V+ ++DGLC++G + A KL M P+ + +TA
Sbjct: 422 PYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTA 481
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEML--- 271
++ + K KAD A M GIS + + T L+ G+CK + +DA F +E L
Sbjct: 482 IINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDAL-FILETLVKM 540
Query: 272 ---------------------------------EAGHSPNVTTFVDLVEGFCKEQGI 295
+ G P+V T+ LV+G + I
Sbjct: 541 RILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDI 597
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 82/164 (50%), Gaps = 3/164 (1%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A IF+++ E GL+P+ V M+DG C G +A + FG + + G P + T ++
Sbjct: 392 ASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIG 451
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
++ DA+ +FR M++ G+ + +Y L+ G K +L FE EM AG SP
Sbjct: 452 ACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISP 511
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFL 321
+V T+ L+ I+EA I LI +GF + A D +
Sbjct: 512 DVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVI 555
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 68/134 (50%), Gaps = 3/134 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVAMLD---GLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A+EI ++ G +P+ +A D G K G QEA L+ M + P++V +A+
Sbjct: 530 DEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSAL 589
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ GY KA + + A +F K+ G+ P+ Y L+ G C ++ A E M++ G
Sbjct: 590 LHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGM 649
Query: 276 SPNVTTFVDLVEGF 289
PN +T LV G
Sbjct: 650 LPNESTHHALVLGL 663
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 78/155 (50%), Gaps = 3/155 (1%)
Query: 163 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 219
E+ +M+ G+ P+ ++ + G + EA ++ + +G +P + +T V+ G+
Sbjct: 499 ELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGF 558
Query: 220 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNV 279
+K +A ++ M + P+ + + L+ G CK R++ A ++L+AG P+V
Sbjct: 559 SKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDV 618
Query: 280 TTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNE 314
+ L+ G+C IE+A I ++++G NE
Sbjct: 619 VLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNE 653
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 91/221 (41%), Gaps = 16/221 (7%)
Query: 93 DEVEKTTMKSDLGFQGRNRPDVANQLGDSFLDKFKLGFDNKAGNSSETNQSEEATKSSNS 152
D V TTM G+ R D A Q + L K+GN S + +
Sbjct: 407 DCVCYTTMID--GYCNLGRTDKAFQYFGALL---------KSGNPPSLTTSTILIGACS- 454
Query: 153 NQPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEI 209
+ DA+ +F+ MK GL + V ++ G K + + +L MR G P++
Sbjct: 455 -RFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDV 513
Query: 210 VIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVE 269
Y ++ D+A I ++ G P+ ++T ++ G K Q+AF
Sbjct: 514 ATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFY 573
Query: 270 MLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
M + P+V T L+ G+CK Q +E+A L++ G
Sbjct: 574 MADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGL 614
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 84/173 (48%), Gaps = 8/173 (4%)
Query: 154 QPAMPEDADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIV 210
+ ++A + K+K G+ + +++DG CK G +EA+KL R + P I
Sbjct: 318 KAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR---PNIF 374
Query: 211 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 270
+Y++ + A IF+++ G+ P+ YT ++ G C R AF++ +
Sbjct: 375 VYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGAL 434
Query: 271 LEAGHSPNVTTFVDLVEGFCKEQG-IEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
L++G+ P++TT L+ G C G I +A+ + + +G ++ + ++
Sbjct: 435 LKSGNPPSLTTSTILI-GACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMH 486
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 82/164 (50%), Gaps = 3/164 (1%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A IF+++ E GL+P+ V M+DG C G +A + FG + + G P + T ++
Sbjct: 392 ASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIG 451
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
++ DA+ +FR M++ G+ + +Y L+ G K +L FE EM AG SP
Sbjct: 452 ACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISP 511
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFL 321
+V T+ L+ I+EA I LI +GF + A D +
Sbjct: 512 DVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVI 555
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 68/134 (50%), Gaps = 3/134 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVAMLD---GLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A+EI ++ G +P+ +A D G K G QEA L+ M + P++V +A+
Sbjct: 530 DEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSAL 589
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ GY KA + + A +F K+ G+ P+ Y L+ G C ++ A E M++ G
Sbjct: 590 LHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGM 649
Query: 276 SPNVTTFVDLVEGF 289
PN +T LV G
Sbjct: 650 LPNESTHHALVLGL 663
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 78/155 (50%), Gaps = 3/155 (1%)
Query: 163 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 219
E+ +M+ G+ P+ ++ + G + EA ++ + +G +P + +T V+ G+
Sbjct: 499 ELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGF 558
Query: 220 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNV 279
+K +A ++ M + P+ + + L+ G CK R++ A ++L+AG P+V
Sbjct: 559 SKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDV 618
Query: 280 TTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNE 314
+ L+ G+C IE+A I ++++G NE
Sbjct: 619 VLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNE 653
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 91/221 (41%), Gaps = 16/221 (7%)
Query: 93 DEVEKTTMKSDLGFQGRNRPDVANQLGDSFLDKFKLGFDNKAGNSSETNQSEEATKSSNS 152
D V TTM G+ R D A Q + L K+GN S + +
Sbjct: 407 DCVCYTTMID--GYCNLGRTDKAFQYFGALL---------KSGNPPSLTTSTILIGACS- 454
Query: 153 NQPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEI 209
+ DA+ +F+ MK GL + V ++ G K + + +L MR G P++
Sbjct: 455 -RFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDV 513
Query: 210 VIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVE 269
Y ++ D+A I ++ G P+ ++T ++ G K Q+AF
Sbjct: 514 ATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFY 573
Query: 270 MLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
M + P+V T L+ G+CK Q +E+A L++ G
Sbjct: 574 MADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGL 614
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 84/173 (48%), Gaps = 8/173 (4%)
Query: 154 QPAMPEDADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIV 210
+ ++A + K+K G+ + +++DG CK G +EA+KL R + P I
Sbjct: 318 KAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR---PNIF 374
Query: 211 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 270
+Y++ + A IF+++ G+ P+ YT ++ G C R AF++ +
Sbjct: 375 VYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGAL 434
Query: 271 LEAGHSPNVTTFVDLVEGFCKEQG-IEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
L++G+ P++TT L+ G C G I +A+ + + +G ++ + ++
Sbjct: 435 LKSGNPPSLTTSTILI-GACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMH 486
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 85/168 (50%), Gaps = 4/168 (2%)
Query: 159 EDADEIFKKMKETGLIPN---AVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++AD M + G IP+ +L LC++GLV A+ F M + G P ++ +T++
Sbjct: 234 QEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSL 293
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA-G 274
++G K A + +M NG PN +++T L+ GLCK + AF ++++ +
Sbjct: 294 IDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDT 353
Query: 275 HSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
+ PNV T+ ++ G+CKE + A+ + E+G N +N
Sbjct: 354 YKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLIN 401
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 78/148 (52%), Gaps = 3/148 (2%)
Query: 154 QPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIV 210
+ + E A+ +F +M G++P++ + M+ G +DG +QEA + M ++G IP+
Sbjct: 194 ELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNA 253
Query: 211 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 270
T ++ + + A FRKM G PN ++T L+ GLCK ++ AFE EM
Sbjct: 254 TCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEM 313
Query: 271 LEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
+ G PNV T L++G CK E+A
Sbjct: 314 VRNGWKPNVYTHTALIDGLCKRGWTEKA 341
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 79/153 (51%), Gaps = 3/153 (1%)
Query: 161 ADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A+ +F +MKE GL PN +++G CK G A +L LM ++G +P I Y A ++
Sbjct: 377 AEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAID 436
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
K +A +A + K S G+ + +YT+L+Q CK + + A F M + G
Sbjct: 437 SLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEA 496
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
++ L+ FC+++ ++E++ + ++ G
Sbjct: 497 DMRLNNILIAAFCRQKKMKESERLFQLVVSLGL 529
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 4/156 (2%)
Query: 174 IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFR 233
+ +M+ G CK+ + A LF M+E+G P + YT ++ G+ KA A +
Sbjct: 358 VHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMN 417
Query: 234 KMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQ 293
M G PN ++Y + LCK SR +A+E + G + T+ L++ CK+
Sbjct: 418 LMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQN 477
Query: 294 GIEEAKGAI----KTLIEKGFAVNEKAVKDFLNKKK 325
I +A KT E +N + F +KK
Sbjct: 478 DINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKK 513
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 11/169 (6%)
Query: 126 FKLGFDNKAGNSSETNQSEEATKSSNSNQPAMPEDADEIFKKMKETGLIPNAV---AMLD 182
F G + A + T +E K ++ NQ A F +M +TG + ++
Sbjct: 455 FSCGLE--ADGVTYTILIQEQCKQNDINQ------ALAFFCRMNKTGFEADMRLNNILIA 506
Query: 183 GLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISP 242
C+ ++E+ +LF L+ G IP YT+++ Y K D A + F M+ +G P
Sbjct: 507 AFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVP 566
Query: 243 NAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCK 291
++F+Y L+ GLCK S + +A + M++ G SP T V L +CK
Sbjct: 567 DSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCK 615
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 82/163 (50%), Gaps = 6/163 (3%)
Query: 168 MKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHK 224
M+ GL P+++ M L+ + GL++ A +F M +G +P+ Y +V G + K
Sbjct: 173 MQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGK 232
Query: 225 ADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVD 284
+A R M G P+ + T+++ LC+ + A + +M++ G PN+ F
Sbjct: 233 IQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTS 292
Query: 285 LVEGFCKEQGIEEAKGAIKTLIEKGFAVN---EKAVKDFLNKK 324
L++G CK+ I++A ++ ++ G+ N A+ D L K+
Sbjct: 293 LIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKR 335
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 75/155 (48%), Gaps = 3/155 (1%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A E+ K GL + V ++ CK + +AL F M + G ++ + ++
Sbjct: 446 EAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILI 505
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+ + K +++R+F+ + S G+ P +YT ++ CK + A ++ M G
Sbjct: 506 AAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCV 565
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
P+ T+ L+ G CK+ ++EA + +I++G +
Sbjct: 566 PDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLS 600
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 76/142 (53%), Gaps = 3/142 (2%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A + KM+ET + P+ V A++D LCKDG +A LF M EKG P + Y +++
Sbjct: 280 ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 339
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G+ + DA+R+ R M I+P+ ++ L+ K +L +A + C EML P
Sbjct: 340 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 399
Query: 278 NVTTFVDLVEGFCKEQGIEEAK 299
+ T+ ++ GFCK ++AK
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDAK 421
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 3/152 (1%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A +F +M E GL P + +++GLC +G V EA L M KG ++V Y +V
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G K A + KM+ I P+ Y+ ++ LCK DA EMLE G +
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
PNV T+ +++GFC +A+ ++ +IE+
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER 360
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 78/152 (51%), Gaps = 3/152 (1%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A + KM GL + V +++G+CK G + AL L M E P++VIY+A++
Sbjct: 244 EAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAII 303
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+ K DA+ +F +M GI+PN F+Y ++ G C R DA +M+E +
Sbjct: 304 DRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREIN 363
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
P+V TF L+ KE + EA+ ++ +
Sbjct: 364 PDVLTFNALISASVKEGKLFEAEKLCDEMLHR 395
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 86/167 (51%), Gaps = 6/167 (3%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A ++F++M G+ P+ + +L G C++ ++EAL+LF +++ + V Y ++
Sbjct: 486 AQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIH 545
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G K K D+A +F + +G+ P+ +Y V++ G C S + DA +M + GH P
Sbjct: 546 GMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEP 605
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF---AVNEKAVKDFL 321
+ +T+ L+ G K I+++ I + GF A K V D +
Sbjct: 606 DNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLI 652
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 73/142 (51%), Gaps = 7/142 (4%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A+++ +M + P+ V +M+ G CK +A +F LM P++V + ++
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTII 439
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+ Y +A + D+ ++ R++ G+ N +Y L+ G C+ L A + EM+ G
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499
Query: 277 PNVTTFVDLVEGFCKEQGIEEA 298
P+ T L+ GFC+ + +EEA
Sbjct: 500 PDTITCNILLYGFCENEKLEEA 521
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 7/155 (4%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA + + M E + P+ + A++ K+G + EA KL M + P+ V Y +++
Sbjct: 349 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G+ K ++ DDAK +F M S P+ ++ ++ C+ R+ + + E+ G
Sbjct: 409 YGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 464
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
N TT+ L+ GFC+ + A+ + +I G
Sbjct: 465 ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 18/167 (10%)
Query: 165 FKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTI--------------- 206
F K+ + G P+ V +L GLC + + EAL LFG M E G +
Sbjct: 164 FGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLT 223
Query: 207 PEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEF 266
P ++ + ++ G + +A + KM G+ + +Y +V G+CK + A
Sbjct: 224 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283
Query: 267 CVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
+M E P+V + +++ CK+ +A+ ++EKG A N
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPN 330
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 71/139 (51%), Gaps = 3/139 (2%)
Query: 163 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 219
++ +++ GL+ N ++ G C+ + A LF M G P+ + ++ G+
Sbjct: 453 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 512
Query: 220 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNV 279
+ K ++A +F +Q + I + +Y +++ G+CK S++ +A++ + G P+V
Sbjct: 513 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 572
Query: 280 TTFVDLVEGFCKEQGIEEA 298
T+ ++ GFC + I +A
Sbjct: 573 QTYNVMISGFCGKSAISDA 591
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 57/121 (47%)
Query: 190 VQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTV 249
+ +A+ F M V V+ + + ++ D A ++RKM+ I N +S+ +
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 250 LVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
L++ C C +L + ++ + G P+V TF L+ G C E I EA ++E G
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 310 F 310
F
Sbjct: 207 F 207
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 69/143 (48%), Gaps = 7/143 (4%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+DA +F M P+ V ++D C+ V E ++L + +G + Y +
Sbjct: 418 DDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 473
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ G+ + + A+ +F++M S+G+ P+ + +L+ G C+ +L++A E + +
Sbjct: 474 IHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKI 533
Query: 276 SPNVTTFVDLVEGFCKEQGIEEA 298
+ + ++ G CK ++EA
Sbjct: 534 DLDTVAYNIIIHGMCKGSKVDEA 556
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 15/136 (11%)
Query: 193 ALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQ 252
A+ L+ M + I + +++ + HK + F K+ G P+ ++ L+
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184
Query: 253 GLCKCSRLQDA---FEFCVE------------MLEAGHSPNVTTFVDLVEGFCKEQGIEE 297
GLC R+ +A F + VE M+E G +P V TF L+ G C E + E
Sbjct: 185 GLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLE 244
Query: 298 AKGAIKTLIEKGFAVN 313
A + ++ KG ++
Sbjct: 245 AAALVNKMVGKGLHID 260
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 4/162 (2%)
Query: 159 EDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A + KMK+ PN ++D LC G EA+ LF M E G P+ +YT +
Sbjct: 242 DEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVL 301
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++ + D+A + M NG+ PN +Y L++G CK + A +MLE
Sbjct: 302 IQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNL 360
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAV 317
P++ T+ L+ G C ++ A + + E G N++ V
Sbjct: 361 VPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRTV 402
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 82/154 (53%), Gaps = 4/154 (2%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A ++FK+M + G N V+ ++ GL + + EAL L M++ P + YT +++
Sbjct: 209 AFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLID 268
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
+ + +A +F++M +GI P+ YTVL+Q C L +A MLE G P
Sbjct: 269 ALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMP 328
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
NV T+ L++GFCK + + +A G + ++E+
Sbjct: 329 NVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLV 361
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 77/157 (49%), Gaps = 3/157 (1%)
Query: 157 MPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 213
+ E+ ++ +M E + P+ +++G CK G V EA + + + G P+ YT
Sbjct: 135 LVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYT 194
Query: 214 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 273
+ + G+ + + D A ++F++M NG N SYT L+ GL + ++ +A V+M +
Sbjct: 195 SFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDD 254
Query: 274 GHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
PNV T+ L++ C EA K + E G
Sbjct: 255 NCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGI 291
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 68/135 (50%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
+ + G C+ V A K+F M + G V YT ++ G +A K D+A + KM+ +
Sbjct: 195 SFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDD 254
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
PN +YTVL+ LC + +A +M E+G P+ + L++ FC ++EA
Sbjct: 255 NCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEA 314
Query: 299 KGAIKTLIEKGFAVN 313
G ++ ++E G N
Sbjct: 315 SGLLEHMLENGLMPN 329
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%)
Query: 180 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 239
+L L + GLV+E +L+ M E P+I + +V GY K +AK+ + G
Sbjct: 126 LLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAG 185
Query: 240 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
P+ F+YT + G C+ + AF+ EM + G N ++ L+ G + + I+EA
Sbjct: 186 CDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEA 244
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 53/103 (51%)
Query: 212 YTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEML 271
Y ++ + ++ KR++ +M + +SP+ +++ LV G CK + +A ++ ++
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 272 EAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNE 314
+AG P+ T+ + G C+ + ++ A K + + G NE
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNE 225
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 17/226 (7%)
Query: 128 LGF-DNKAGNSSETNQSEEATKSSNSNQPAMPEDADEIFKKMKETGLIPNAVAM---LDG 183
LGF D G + N + + M +A E FK+ ++ + + V D
Sbjct: 338 LGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDA 397
Query: 184 LCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPN 243
L K G V+EA +L M+++G +P+++ YT +++GY K DA + +M NG+SP+
Sbjct: 398 LSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPD 457
Query: 244 AFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIK 303
+Y VLV GL + ++ E M G PN T ++EG C + ++EA+
Sbjct: 458 LITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFS 517
Query: 304 TL----------IEKGFA---VNEKAVKDFLNKKKPFSPSVWEAIF 336
+L KG+ +++KA K F+ + P SV+ +F
Sbjct: 518 SLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLF 563
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A +F M E GLIP+ M+ C+ +Q+A LF M+++G P++V YT ++
Sbjct: 609 EAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLL 668
Query: 217 EGYTKA----HKADD---------AKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDA 263
+ Y K H+ A + R+ + GI + YTVL+ CK + L+ A
Sbjct: 669 DRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQA 728
Query: 264 FEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
E M+++G P++ + L+ + ++ I+ A + L +K
Sbjct: 729 AELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKK 773
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 88/218 (40%), Gaps = 66/218 (30%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E+A E+ ++MK+ G++P+ + ++DG C G V +AL L M G P+++ Y +
Sbjct: 405 EEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVL 464
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDA------------ 263
V G + ++ I+ +M++ G PNA + +V+++GLC ++++A
Sbjct: 465 VSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCP 524
Query: 264 ---------------------------------------FEFCVE-MLEAGH-------- 275
F C+E LE H
Sbjct: 525 ENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSA 584
Query: 276 ---SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
P + ++ FCK + EA+ T++E+G
Sbjct: 585 YRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGL 622
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 16/168 (9%)
Query: 159 EDADEIFKKMKETGLIPN---AVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A ++ KKM + P M+ CK V+EA LF M E+G IP++ YT +
Sbjct: 573 EKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIM 632
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCK--------CSRL-----QD 262
+ Y + ++ A+ +F M+ GI P+ +YTVL+ K CS +
Sbjct: 633 IHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRK 692
Query: 263 AFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
A E E AG +V + L++ CK +E+A +I+ G
Sbjct: 693 ASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGL 740
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 3/154 (1%)
Query: 161 ADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A+ + +M+E G + +A++D CK+ + EAL M KG VI + +++
Sbjct: 302 AESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQ 361
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
Y K +A F++ + I + Y V L K R+++AFE EM + G P
Sbjct: 362 CYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVP 421
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
+V + L++G+C + + +A I +I G +
Sbjct: 422 DVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMS 455
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 56/114 (49%)
Query: 178 VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQS 237
+ + LC +G +++A + M P + ++ + K + +A+ +F M
Sbjct: 560 IKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVE 619
Query: 238 NGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCK 291
G+ P+ F+YT+++ C+ + LQ A +M + G P+V T+ L++ + K
Sbjct: 620 RGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLK 673
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 82/153 (53%), Gaps = 3/153 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A E+ +MK +G + V ++D CK G + EA+ M+ G ++V+YT++
Sbjct: 194 EKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSL 253
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ G+ + D K +F ++ G SP A +Y L++G CK +L++A E M+E G
Sbjct: 254 IRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGV 313
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
PNV T+ L++G C +EA + +IEK
Sbjct: 314 RPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEK 346
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 77/155 (49%), Gaps = 5/155 (3%)
Query: 159 EDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A EIF+ M E G+ PN ++DGLC G +EAL+L LM EK P V Y +
Sbjct: 299 KEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNII 358
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE--A 273
+ K DA I M+ P+ +Y +L+ GLC L +A + ML+ +
Sbjct: 359 INKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSS 418
Query: 274 GHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
P+V ++ L+ G CKE + +A L+EK
Sbjct: 419 YTDPDVISYNALIHGLCKENRLHQALDIYDLLVEK 453
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 80/152 (52%), Gaps = 3/152 (1%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A + ++M+ L+P+ + ++ G C+ +++AL+L M+ G +V + +++
Sbjct: 161 AVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILID 220
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
+ KA K D+A ++M+ G+ + YT L++G C C L E+LE G SP
Sbjct: 221 AFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSP 280
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
T+ L+ GFCK ++EA + +IE+G
Sbjct: 281 CAITYNTLIRGFCKLGQLKEASEIFEFMIERG 312
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 14/209 (6%)
Query: 105 GFQGRNRPDVANQLGDSFLDKFKLGFDNKAGNSSETNQSEEATKSSNSNQPAMPEDADEI 164
G NR A + D ++K LG AG+ TN +T + AM E+
Sbjct: 433 GLCKENRLHQALDIYDLLVEK--LG----AGDRVTTNILLNSTLKAGDVNKAM-----EL 481
Query: 165 FKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTK 221
+K++ ++ ++ N+ AM+DG CK G++ A L MR P + Y ++ K
Sbjct: 482 WKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCK 541
Query: 222 AHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTT 281
D A R+F +MQ + P+ S+ +++ G K ++ A V M AG SP++ T
Sbjct: 542 EGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFT 601
Query: 282 FVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
+ L+ F K ++EA +++ GF
Sbjct: 602 YSKLINRFLKLGYLDEAISFFDKMVDSGF 630
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 71/143 (49%), Gaps = 3/143 (2%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A K+MK GL + V +++ G C G + LF + E+G P + Y +
Sbjct: 229 DEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTL 288
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ G+ K + +A IF M G+ PN ++YT L+ GLC + ++A + M+E
Sbjct: 289 IRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDE 348
Query: 276 SPNVTTFVDLVEGFCKEQGIEEA 298
PN T+ ++ CK+ + +A
Sbjct: 349 EPNAVTYNIIINKLCKDGLVADA 371
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 74/147 (50%), Gaps = 3/147 (2%)
Query: 164 IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
+F ++ E G P A+ ++ G CK G ++EA ++F M E+G P + YT +++G
Sbjct: 269 LFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLC 328
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
K +A ++ M PNA +Y +++ LCK + DA E M + P+
Sbjct: 329 GVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNI 388
Query: 281 TFVDLVEGFCKEQGIEEAKGAIKTLIE 307
T+ L+ G C + ++EA + +++
Sbjct: 389 TYNILLGGLCAKGDLDEASKLLYLMLK 415
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 83/185 (44%), Gaps = 40/185 (21%)
Query: 158 PEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 214
++A ++ M E PNAV +++ LCKDGLV +A+++ LM+++ T P+ + Y
Sbjct: 333 TKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNI 392
Query: 215 VVEGYTKAHKADDAKRIFRKM--QSNGISPNAFSYTVLVQGLCKCSRLQ---DAFEFCVE 269
++ G D+A ++ M S+ P+ SY L+ GLCK +RL D ++ VE
Sbjct: 393 LLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVE 452
Query: 270 MLEAGHSP--------------------------------NVTTFVDLVEGFCKEQGIEE 297
L AG N T+ +++GFCK +
Sbjct: 453 KLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNV 512
Query: 298 AKGAI 302
AKG +
Sbjct: 513 AKGLL 517
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 87/175 (49%), Gaps = 8/175 (4%)
Query: 154 QPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIV 210
+ M A + KM+ + L P+ +L LCK+G + +A +LF M+ P++V
Sbjct: 506 KTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVV 565
Query: 211 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 270
+ +++G KA A+ + M G+SP+ F+Y+ L+ K L +A F +M
Sbjct: 566 SFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKM 625
Query: 271 LEAGHSPNVTTFVDLVEGFCKEQG-IEEAKGAIKTLIEKGFAVNEK---AVKDFL 321
+++G P+ D V +C QG ++ +K L++K ++++ V D++
Sbjct: 626 VDSGFEPD-AHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYM 679
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 67/136 (49%)
Query: 174 IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFR 233
+ N +L GLC++ +A+ L MR +P++ Y V+ G+ + + + A +
Sbjct: 142 VYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELAN 201
Query: 234 KMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQ 293
+M+ +G S + ++ +L+ CK ++ +A F EM G ++ + L+ GFC
Sbjct: 202 EMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCG 261
Query: 294 GIEEAKGAIKTLIEKG 309
++ K ++E+G
Sbjct: 262 ELDRGKALFDEVLERG 277
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 84/171 (49%), Gaps = 11/171 (6%)
Query: 159 EDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQE-----ALKLFGLMREKGTIPEIVIYT 213
E A ++KM ET N V+ L GL + VQ A + LM ++G + +
Sbjct: 89 ELAFSFYRKMLETDTFINFVS-LSGLL-ECYVQMRKTGFAFGVLALMLKRGFAFNVYNHN 146
Query: 214 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 273
+++G + + A + R+M+ N + P+ FSY +++G C+ L+ A E EM +
Sbjct: 147 ILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGS 206
Query: 274 GHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTL----IEKGFAVNEKAVKDF 320
G S ++ T+ L++ FCK ++EA G +K + +E V ++ F
Sbjct: 207 GCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGF 257
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 66/132 (50%)
Query: 180 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 239
+L+ K G V +A++L+ + + + YTA+++G+ K + AK + KM+ +
Sbjct: 465 LLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSE 524
Query: 240 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAK 299
+ P+ F Y L+ LCK L A+ EM + P+V +F +++G K I+ A+
Sbjct: 525 LQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAE 584
Query: 300 GAIKTLIEKGFA 311
+ + G +
Sbjct: 585 SLLVGMSRAGLS 596
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 61/120 (50%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
A++ GLCK+ + +AL ++ L+ EK + V ++ KA + A +++++ +
Sbjct: 429 ALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDS 488
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
I N+ +YT ++ G CK L A +M + P+V + L+ CKE +++A
Sbjct: 489 KIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQA 548
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 93/168 (55%), Gaps = 5/168 (2%)
Query: 159 EDADEIFKKMKETGLIP-NAV--AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A +++KM + +P NA+ ++ LCK+G V EA KLF EKG+IP ++ Y +
Sbjct: 348 DEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEF-EKGSIPSLLTYNTL 406
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ G + + +A R++ M PNAF+Y VL++GL K +++ EMLE G
Sbjct: 407 IAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGC 466
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLNK 323
PN TTF+ L EG K E+A + + G V++++ + FL K
Sbjct: 467 FPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNG-KVDKESWELFLKK 513
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 164 IFKKMKET-GLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 219
+FK KE+ G+ PN ++ LCK ++ A K+ + G +P +V YT ++ GY
Sbjct: 177 MFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGY 236
Query: 220 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNV 279
+ AKR+ +M G P+A +YTVL+ G CK R +A +M + PN
Sbjct: 237 VARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNE 296
Query: 280 TTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
T+ ++ CKE+ EA+ ++E+ F
Sbjct: 297 VTYGVMIRALCKEKKSGEARNMFDEMLERSF 327
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 79/152 (51%), Gaps = 3/152 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A ++ ++ GL+PN V +L G G ++ A ++ M ++G P+ YT +
Sbjct: 208 ESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVL 267
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++GY K + +A + M+ N I PN +Y V+++ LCK + +A EMLE
Sbjct: 268 MDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSF 327
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIE 307
P+ + +++ C++ ++EA G + +++
Sbjct: 328 MPDSSLCCKVIDALCEDHKVDEACGLWRKMLK 359
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 74/178 (41%), Gaps = 39/178 (21%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEAL--------------------- 194
E A + ++M + G P+A ++DG CK G EA
Sbjct: 243 ESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVM 302
Query: 195 --------------KLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGI 240
+F M E+ +P+ + V++ + HK D+A ++RKM N
Sbjct: 303 IRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNC 362
Query: 241 SPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
P+ + L+ LCK R+ +A + E E G P++ T+ L+ G C++ + EA
Sbjct: 363 MPDNALLSTLIHWLCKEGRVTEARKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELTEA 419
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 73/141 (51%), Gaps = 3/141 (2%)
Query: 168 MKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHK 224
M + P + +M+DG CK V +A ++ M KG P++V ++ ++ GY KA +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 225 ADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVD 284
D+ IF +M GI N +YT L+ G C+ L A + EM+ G +P+ TF
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 285 LVEGFCKEQGIEEAKGAIKTL 305
++ G C ++ + +A ++ L
Sbjct: 121 MLAGLCSKKELRKAFAILEDL 141
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 57/112 (50%)
Query: 200 MREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSR 259
M P + Y ++++G+ K + DDAKR+ M S G SP+ +++ L+ G CK R
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 260 LQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
+ + E EM G N T+ L+ GFC+ ++ A+ + +I G A
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVA 112
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 87/194 (44%), Gaps = 38/194 (19%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E+A + K MKE GL P+A + ++ C++G + A++ M G +P+IV Y V
Sbjct: 350 EEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTV 409
Query: 216 VEGYTKAHKADDAKRIFRK-----------------------------------MQSNGI 240
+ K KAD A IF K M SNGI
Sbjct: 410 LATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGI 469
Query: 241 SPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKG 300
P+ +Y ++ LC+ + +AFE V+M P+V T+ ++ GFCK IE+A
Sbjct: 470 DPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIN 529
Query: 301 AIKTLIEKGFAVNE 314
+++++ G NE
Sbjct: 530 VLESMVGNGCRPNE 543
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 80/155 (51%), Gaps = 6/155 (3%)
Query: 161 ADEIFKKMKET---GLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 214
DE K M E GL P+ ++ G+CK+G+V A ++ + KG P+++ Y
Sbjct: 244 VDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNI 303
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
++ K ++ +++ KM S PN +Y++L+ LC+ ++++A M E G
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 363
Query: 275 HSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
+P+ ++ L+ FC+E ++ A ++T+I G
Sbjct: 364 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 71/140 (50%), Gaps = 9/140 (6%)
Query: 119 GDSFLDKF-KLGFDNKAGNSSETNQSEEATKSSNSNQPAMPEDADEIFKKMKETGLIPNA 177
D L+ F KLG + NSS N A SS A+ + +M G+ P+
Sbjct: 419 ADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL-----HMILEMMSNGIDPDE 473
Query: 178 V---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRK 234
+ +M+ LC++G+V EA +L MR P +V Y V+ G+ KAH+ +DA +
Sbjct: 474 ITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLES 533
Query: 235 MQSNGISPNAFSYTVLVQGL 254
M NG PN +YTVL++G+
Sbjct: 534 MVGNGCRPNETTYTVLIEGI 553
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 77/191 (40%), Gaps = 38/191 (19%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+DA + +M+ P+ V M+ LC G + ALK+ + P ++ YT +
Sbjct: 175 DDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTIL 234
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFE---------- 265
+E D+A ++ +M S G+ P+ F+Y +++G+CK + AFE
Sbjct: 235 IEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGC 294
Query: 266 -------------------------FCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKG 300
+M PNV T+ L+ C++ IEEA
Sbjct: 295 EPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMN 354
Query: 301 AIKTLIEKGFA 311
+K + EKG
Sbjct: 355 LLKLMKEKGLT 365
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 62/121 (51%), Gaps = 7/121 (5%)
Query: 190 VQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTV 249
V E L+ FG P++ Y A++ G+ K ++ DDA R+ +M+S SP+ +Y +
Sbjct: 146 VMEILEKFGQ-------PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNI 198
Query: 250 LVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
++ LC +L A + ++L P V T+ L+E E G++EA + ++ +G
Sbjct: 199 MIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG 258
Query: 310 F 310
Sbjct: 259 L 259
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 3/134 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+ A EIF K+ E G PN+ + M L G AL + M G P+ + Y ++
Sbjct: 420 DQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSM 479
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ + D+A + M+S P+ +Y +++ G CK R++DA M+ G
Sbjct: 480 ISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGC 539
Query: 276 SPNVTTFVDLVEGF 289
PN TT+ L+EG
Sbjct: 540 RPNETTYTVLIEGI 553
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 65/131 (49%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
A+++G CK + +A ++ MR K P+ V Y ++ K D A ++ ++ S+
Sbjct: 163 ALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSD 222
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
P +YT+L++ + +A + EML G P++ T+ ++ G CKE ++ A
Sbjct: 223 NCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRA 282
Query: 299 KGAIKTLIEKG 309
++ L KG
Sbjct: 283 FEMVRNLELKG 293
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 77/164 (46%), Gaps = 3/164 (1%)
Query: 156 AMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIY 212
M + A E+ + ++ G P+ ++ +L L G +E KL M + P +V Y
Sbjct: 277 GMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTY 336
Query: 213 TAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 272
+ ++ + K ++A + + M+ G++P+A+SY L+ C+ RL A EF M+
Sbjct: 337 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396
Query: 273 AGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKA 316
G P++ + ++ CK ++A L E G + N +
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSS 440
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 84/169 (49%), Gaps = 5/169 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLM-REKGTIPEIVIYTA 214
E+A E+ + M G +P+ V+ ++ LCK+ + E L M +E G +P+ V Y
Sbjct: 329 EEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNT 388
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
++ TK AD+A + Q G + Y+ +V LCK R+ +A + EML G
Sbjct: 389 LIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKG 448
Query: 275 HS-PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
H P+V T+ +V GFC+ +++AK ++ + G N + LN
Sbjct: 449 HCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLN 497
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 80/164 (48%), Gaps = 7/164 (4%)
Query: 186 KDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAF 245
+ G +++ALK+ LM+ G P ++I ++ + +A++ + A R +MQ GI PN
Sbjct: 254 RAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVV 313
Query: 246 SYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTL 305
+Y +++G C R+++A E +M G P+ ++ ++ CKE+ I E + +K +
Sbjct: 314 TYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKM 373
Query: 306 I-EKGFA---VNEKAVKDFLNKKKPFSPSVWEAIFGKKAPQMPF 345
E G V + L K ++W F K A + F
Sbjct: 374 AKEHGLVPDQVTYNTLIHMLTKHDHADEALW---FLKDAQEKGF 414
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 82/158 (51%), Gaps = 4/158 (2%)
Query: 160 DADEIFKKMKETGLIPNAV----AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+A ++ +M G P V A+++G C+ G V +A KL +M G P V YTA+
Sbjct: 436 EAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTAL 495
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ G + K+ +A+ + + + SPN+ +Y+V++ GL + +L +A + EM+ G
Sbjct: 496 LNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGF 555
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
P L++ C++ EA+ ++ + KG A+N
Sbjct: 556 FPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAIN 593
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 77/159 (48%), Gaps = 4/159 (2%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA ++ M+ G+ PN + +D + +++AL+ M+ G +P +V Y ++
Sbjct: 260 DALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMI 319
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEML-EAGH 275
GY H+ ++A + M S G P+ SY ++ LCK R+ + + +M E G
Sbjct: 320 RGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGL 379
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNE 314
P+ T+ L+ K +EA +K EKGF +++
Sbjct: 380 VPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDK 418
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 79/161 (49%), Gaps = 7/161 (4%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+ A ++ + M G PN V A+L+G+C+ G EA ++ + E P + Y+ +
Sbjct: 471 DKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVI 530
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ G + K +A + R+M G P +L+Q LC+ R +A +F E L G
Sbjct: 531 MHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGC 590
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKA 316
+ NV F ++ GFC+ ++ A ++++ + +N+ A
Sbjct: 591 AINVVNFTTVIHGFCQNDELDAA----LSVLDDMYLINKHA 627
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 3/150 (2%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
+ML+ L K L Q + ++ LM+ +G ++ V+ Y++A + DA ++ MQ
Sbjct: 212 SMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRA 271
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
G+ PN + + +RL+ A F M G PNV T+ ++ G+C +EEA
Sbjct: 272 GVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEA 331
Query: 299 KGAIKTLIEKGFA---VNEKAVKDFLNKKK 325
++ + KG V+ + +L K+K
Sbjct: 332 IELLEDMHSKGCLPDKVSYYTIMGYLCKEK 361
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 78/181 (43%), Gaps = 13/181 (7%)
Query: 141 NQSEEATKSSNS----------NQPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKD 187
N SEE S NS + +A ++ ++M G P V +L LC+D
Sbjct: 513 NMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRD 572
Query: 188 GLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSY 247
G EA K KG +V +T V+ G+ + + D A + M + F+Y
Sbjct: 573 GRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTY 632
Query: 248 TVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIE 307
T LV L K R+ +A E +ML G P T+ ++ +C+ +++ ++ +I
Sbjct: 633 TTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMIS 692
Query: 308 K 308
+
Sbjct: 693 R 693
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 2/114 (1%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
++D L K G + EA +L M KG P V Y V+ Y + K DD I KM S
Sbjct: 634 TLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISR 693
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKE 292
Y +++ LC +L++A ++L + T L+EG+ K+
Sbjct: 694 QKCRTI--YNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKK 745
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 82/154 (53%), Gaps = 3/154 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E+ E+F++M + GL+ N V ++ GL + G A ++F M G P I+ Y +
Sbjct: 413 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 472
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++G K K + A +F +Q + + P ++Y ++++G+CK +++D ++ + G
Sbjct: 473 LDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGV 532
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
P+V + ++ GFC++ EEA K + E G
Sbjct: 533 KPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG 566
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 3/152 (1%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A + +M G P+ V +++GLCK G A L M + P ++IY ++
Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 263
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+G K DDA +F++M++ GI PN +Y+ L+ LC R DA +M+E +
Sbjct: 264 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 323
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
P+V TF L++ F KE + EA+ ++++
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 88/161 (54%), Gaps = 9/161 (5%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+DA +FK+M+ G+ PN V +++ LC G +A +L M E+ P++ ++A+
Sbjct: 273 DDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSAL 332
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDA---FEFCVEMLE 272
++ + K K +A++++ +M I P+ +Y+ L+ G C RL +A FEF M+
Sbjct: 333 IDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF---MVS 389
Query: 273 AGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
P+V T+ L++GFCK + +EE + + ++G N
Sbjct: 390 KHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 430
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 84/152 (55%), Gaps = 9/152 (5%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A++++ +M + + P+ V ++++G C + EA ++F M K P++V Y ++
Sbjct: 344 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 403
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCK---CSRLQDAFEFCVEMLEA 273
+G+ K + ++ +FR+M G+ N +Y +L+QGL + C Q+ F+ EM+
Sbjct: 404 KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK---EMVSD 460
Query: 274 GHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTL 305
G PN+ T+ L++G CK +E+A + L
Sbjct: 461 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 84/170 (49%), Gaps = 6/170 (3%)
Query: 146 ATKSSNSNQPAMPEDADE---IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGL 199
T SS N M + DE +F+ M P+ V ++ G CK V+E +++F
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421
Query: 200 MREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSR 259
M ++G + V Y +++G +A D A+ IF++M S+G+ PN +Y L+ GLCK +
Sbjct: 422 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 481
Query: 260 LQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
L+ A + + P + T+ ++EG CK +E+ L KG
Sbjct: 482 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 531
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 3/154 (1%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A EIFK+M G+ PN + +LDGLCK+G +++A+ +F ++ P I Y ++E
Sbjct: 450 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 509
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G KA K +D +F + G+ P+ +Y ++ G C+ ++A EM E G P
Sbjct: 510 GMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLP 569
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
N + L+ ++ E + IK + GFA
Sbjct: 570 NSGCYNTLIRARLRDGDREASAELIKEMRSCGFA 603
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 78/151 (51%), Gaps = 3/151 (1%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A + KM++ L P + ++DGLCK + +AL LF M KG P +V Y++++
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
+ DA R+ M I+P+ F+++ L+ K +L +A + EM++ P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
++ T+ L+ GFC ++EAK + ++ K
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSK 390
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 78/153 (50%), Gaps = 3/153 (1%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA + M E + P+ A++D K+G + EA KL+ M ++ P IV Y++++
Sbjct: 309 DASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLI 368
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G+ + D+AK++F M S P+ +Y L++G CK R+++ E EM + G
Sbjct: 369 NGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 428
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
N T+ L++G + + A+ K ++ G
Sbjct: 429 GNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 461
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 66/152 (43%), Gaps = 3/152 (1%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A + +M TG PN V ++ GL EA+ L M KG P++V Y VV
Sbjct: 169 EAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVV 228
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G K D A + KM+ + P Y ++ GLCK + DA EM G
Sbjct: 229 NGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIR 288
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
PNV T+ L+ C +A + +IE+
Sbjct: 289 PNVVTYSSLISCLCNYGRWSDASRLLSDMIER 320
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 3/156 (1%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A + KM + G PN V ++L+G C + EA+ L M G P V + ++
Sbjct: 135 ALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIH 194
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G +KA +A + +M + G P+ +Y V+V GLCK AF +M + P
Sbjct: 195 GLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEP 254
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
V + +++G CK + +++A K + KG N
Sbjct: 255 GVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPN 290
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 70/134 (52%), Gaps = 4/134 (2%)
Query: 184 LCKDGL----VQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 239
L ++GL + +A+ LFG M + P I+ ++ ++ K +K D + +MQ+ G
Sbjct: 52 LSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLG 111
Query: 240 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAK 299
I N ++Y++L+ C+ S+L A +M++ G+ PN+ T L+ G+C + I EA
Sbjct: 112 IPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAV 171
Query: 300 GAIKTLIEKGFAVN 313
+ + G+ N
Sbjct: 172 ALVDQMFVTGYQPN 185
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 65/127 (51%), Gaps = 3/127 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A +F+ ++ + + P M++G+CK G V++ LF + KG P++V Y +
Sbjct: 483 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTM 542
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ G+ + ++A +F++M+ +G PN+ Y L++ + + + E EM G
Sbjct: 543 ISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGF 602
Query: 276 SPNVTTF 282
+ + +T
Sbjct: 603 AGDASTI 609
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 55/112 (49%)
Query: 180 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 239
+++ C+ + AL + G M + G P IV ++++ GY + + +A + +M G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 240 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCK 291
PN ++ L+ GL ++ +A M+ G P++ T+ +V G CK
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 69/176 (39%), Gaps = 3/176 (1%)
Query: 137 SSETNQSEEATKSSNSNQPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEA 193
S +T+ S N +DA +F +M ++ P+ + +L + K
Sbjct: 41 SGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVV 100
Query: 194 LKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQG 253
+ L M+ G Y+ ++ + + + A + KM G PN + + L+ G
Sbjct: 101 ISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNG 160
Query: 254 LCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
C R+ +A +M G+ PN TF L+ G EA I ++ KG
Sbjct: 161 YCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG 216
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 83/159 (52%), Gaps = 4/159 (2%)
Query: 159 EDADEIFKKMK-ETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 214
++A+E+ +MK E +PNAV ++DG C+ G ++ A ++ M+E P +V
Sbjct: 387 KEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNT 446
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
+V G + H + A F M+ G+ N +Y L+ C S ++ A + +MLEAG
Sbjct: 447 IVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAG 506
Query: 275 HSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
SP+ + L+ G C+ + +A ++ L E GF+++
Sbjct: 507 CSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLD 545
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 73/132 (55%), Gaps = 1/132 (0%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMR-EKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQS 237
++DGLCK G ++EA +L M+ E+ +P V Y +++GY +A K + AK + +M+
Sbjct: 375 TLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKE 434
Query: 238 NGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEE 297
+ I PN + +V G+C+ L A F ++M + G NV T++ L+ C +E+
Sbjct: 435 DEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEK 494
Query: 298 AKGAIKTLIEKG 309
A + ++E G
Sbjct: 495 AMYWYEKMLEAG 506
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 78/175 (44%), Gaps = 6/175 (3%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A E+ +MKE + PN V ++ G+C+ + A+ F M ++G +V Y +
Sbjct: 423 ETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTL 482
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ + A + KM G SP+A Y L+ GLC+ R DA ++ E G
Sbjct: 483 IHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGF 542
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF---AVNEKAVKDFLNKKKPF 327
S ++ + L+ FC + E+ + + ++G ++ + F K K F
Sbjct: 543 SLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDF 597
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 70/150 (46%), Gaps = 3/150 (2%)
Query: 159 EDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A ++KM E G P+A A++ GLC+ +A+++ ++E G +++ Y +
Sbjct: 493 EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNML 552
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ + + A+ + M+ G P++ +Y L+ K + +M E G
Sbjct: 553 IGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTL 305
P VTT+ +++ +C ++EA K +
Sbjct: 613 DPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 4/133 (3%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTI-PEIVIYTA 214
E + + ++M+E GL P A++D C G + EALKLF M + P VIY
Sbjct: 598 ESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNI 657
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
++ ++K A + +M+ + PN +Y L + L + ++ + + EM+E
Sbjct: 658 LINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQS 717
Query: 275 HSPNVTTFVDLVE 287
PN T L+E
Sbjct: 718 CEPNQITMEILME 730
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 83/159 (52%), Gaps = 4/159 (2%)
Query: 159 EDADEIFKKMK-ETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 214
++A+E+ +MK E +PNAV ++DG C+ G ++ A ++ M+E P +V
Sbjct: 387 KEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNT 446
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
+V G + H + A F M+ G+ N +Y L+ C S ++ A + +MLEAG
Sbjct: 447 IVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAG 506
Query: 275 HSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
SP+ + L+ G C+ + +A ++ L E GF+++
Sbjct: 507 CSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLD 545
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 73/132 (55%), Gaps = 1/132 (0%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMR-EKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQS 237
++DGLCK G ++EA +L M+ E+ +P V Y +++GY +A K + AK + +M+
Sbjct: 375 TLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKE 434
Query: 238 NGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEE 297
+ I PN + +V G+C+ L A F ++M + G NV T++ L+ C +E+
Sbjct: 435 DEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEK 494
Query: 298 AKGAIKTLIEKG 309
A + ++E G
Sbjct: 495 AMYWYEKMLEAG 506
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 78/175 (44%), Gaps = 6/175 (3%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A E+ +MKE + PN V ++ G+C+ + A+ F M ++G +V Y +
Sbjct: 423 ETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTL 482
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ + A + KM G SP+A Y L+ GLC+ R DA ++ E G
Sbjct: 483 IHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGF 542
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF---AVNEKAVKDFLNKKKPF 327
S ++ + L+ FC + E+ + + ++G ++ + F K K F
Sbjct: 543 SLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDF 597
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 70/150 (46%), Gaps = 3/150 (2%)
Query: 159 EDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A ++KM E G P+A A++ GLC+ +A+++ ++E G +++ Y +
Sbjct: 493 EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNML 552
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ + + A+ + M+ G P++ +Y L+ K + +M E G
Sbjct: 553 IGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTL 305
P VTT+ +++ +C ++EA K +
Sbjct: 613 DPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 3/159 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E+A ++F KM+E G+ PN V ++DGL G EA M E+G P ++ Y+ +
Sbjct: 277 EEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSIL 336
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
V+G T+A + DA + ++M G PN Y L+ + L A E M+ G
Sbjct: 337 VKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL 396
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNE 314
S +T+ L++G+CK + A+ +K ++ GF VN+
Sbjct: 397 SLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 71/133 (53%)
Query: 181 LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGI 240
++ CK G V+EA+KLF M E G P +V + V++G + D+A KM G+
Sbjct: 267 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 326
Query: 241 SPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKG 300
P +Y++LV+GL + R+ DA+ EM + G PNV + +L++ F + + +A
Sbjct: 327 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIE 386
Query: 301 AIKTLIEKGFAVN 313
++ KG ++
Sbjct: 387 IKDLMVSKGLSLT 399
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 83/156 (53%), Gaps = 4/156 (2%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A ++F + G+ P+ +L L + Q+ + F ++ KG P++ ++T +
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVC-KGVSPDVYLFTTAIN 268
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
+ K K ++A ++F KM+ G++PN ++ ++ GL C R +AF F +M+E G P
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
+ T+ LV+G + + I +A +K + +KGF N
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPN 364
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 81/166 (48%), Gaps = 3/166 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E+ E F +M + PN V ++ C+ G + AL+L M+ KG P YT++
Sbjct: 627 EEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSL 686
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++G + + ++AK +F +M+ G+ PN F YT L+ G K ++ EM
Sbjct: 687 IKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNV 746
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFL 321
PN T+ ++ G+ ++ + EA + + EKG + K+F+
Sbjct: 747 HPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFI 792
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 76/141 (53%), Gaps = 3/141 (2%)
Query: 161 ADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A E+ + MK G+ PN+ +++ G+ V+EA LF MR +G P + YTA+++
Sbjct: 664 ALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALID 723
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
GY K + + + R+M S + PN +YTV++ G + + +A EM E G P
Sbjct: 724 GYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVP 783
Query: 278 NVTTFVDLVEGFCKEQGIEEA 298
+ T+ + + G+ K+ G+ EA
Sbjct: 784 DSITYKEFIYGYLKQGGVLEA 804
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 70/136 (51%), Gaps = 3/136 (2%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E+A + + K G++P+ M+DG CK +E + F M K P V+Y +
Sbjct: 592 EEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL 651
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ Y ++ + A + M+ GISPN+ +YT L++G+ SR+++A EM G
Sbjct: 652 IRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGL 711
Query: 276 SPNVTTFVDLVEGFCK 291
PNV + L++G+ K
Sbjct: 712 EPNVFHYTALIDGYGK 727
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 3/166 (1%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA + K+M + G PN + ++D + G + +A+++ LM KG Y ++
Sbjct: 348 DAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLI 407
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+GY K +AD+A+R+ ++M S G + N S+T ++ LC A F EML S
Sbjct: 408 KGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMS 467
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
P L+ G CK +A + KGF V+ + L+
Sbjct: 468 PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLH 513
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 73/144 (50%), Gaps = 3/144 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A +M + GL P+ ++ GL V+EA++ + + G +P++ Y+ +
Sbjct: 557 DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVM 616
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++G KA + ++ + F +M S + PN Y L++ C+ RL A E +M G
Sbjct: 617 IDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI 676
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAK 299
SPN T+ L++G +EEAK
Sbjct: 677 SPNSATYTSLIKGMSIISRVEEAK 700
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 84/175 (48%), Gaps = 8/175 (4%)
Query: 147 TKSSNSNQPAMPEDA--DEIFKKMKET---GLIPNAVA---MLDGLCKDGLVQEALKLFG 198
T++SN+ + E DE F+ KE G + + V+ ++ G C + EA
Sbjct: 505 TRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLD 564
Query: 199 LMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCS 258
M ++G P+ Y+ ++ G +K ++A + + + NG+ P+ ++Y+V++ G CK
Sbjct: 565 EMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAE 624
Query: 259 RLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
R ++ EF EM+ PN + L+ +C+ + A + + KG + N
Sbjct: 625 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPN 679
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
++ GLCK G +AL+L+ KG + + A++ G +A K D+A RI +++
Sbjct: 475 TLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR 534
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
G + SY L+ G C +L +AF F EM++ G P+ T+ L+ G +EEA
Sbjct: 535 GCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEA 594
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Query: 159 EDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E+A +F++M+ GL PN A++DG K G + + L M K P + YT +
Sbjct: 697 EEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVM 756
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFE 265
+ GY + +A R+ +M+ GI P++ +Y + G K + +AF+
Sbjct: 757 IGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 93/208 (44%), Gaps = 14/208 (6%)
Query: 114 VANQLGDSFLDKFKLGFDNKAGNSSETNQSEEATKSSNSNQPAM--------PEDADEIF 165
V N L DSF++ G NKA + S+ + +S++ + ++A+ +
Sbjct: 367 VYNNLIDSFIEA---GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLL 423
Query: 166 KKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKA 222
K+M G N +++ LC + AL+ G M + P + T ++ G K
Sbjct: 424 KEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKH 483
Query: 223 HKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTF 282
K A ++ + + G + + L+ GLC+ +L +AF E+L G + ++
Sbjct: 484 GKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSY 543
Query: 283 VDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
L+ G C ++ ++EA + ++++G
Sbjct: 544 NTLISGCCGKKKLDEAFMFLDEMVKRGL 571
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 3/159 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E+A ++F KM+E G+ PN V ++DGL G EA M E+G P ++ Y+ +
Sbjct: 277 EEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSIL 336
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
V+G T+A + DA + ++M G PN Y L+ + L A E M+ G
Sbjct: 337 VKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL 396
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNE 314
S +T+ L++G+CK + A+ +K ++ GF VN+
Sbjct: 397 SLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 71/133 (53%)
Query: 181 LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGI 240
++ CK G V+EA+KLF M E G P +V + V++G + D+A KM G+
Sbjct: 267 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 326
Query: 241 SPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKG 300
P +Y++LV+GL + R+ DA+ EM + G PNV + +L++ F + + +A
Sbjct: 327 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIE 386
Query: 301 AIKTLIEKGFAVN 313
++ KG ++
Sbjct: 387 IKDLMVSKGLSLT 399
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 83/156 (53%), Gaps = 4/156 (2%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A ++F + G+ P+ +L L + Q+ + F ++ KG P++ ++T +
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVC-KGVSPDVYLFTTAIN 268
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
+ K K ++A ++F KM+ G++PN ++ ++ GL C R +AF F +M+E G P
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
+ T+ LV+G + + I +A +K + +KGF N
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPN 364
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 81/166 (48%), Gaps = 3/166 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E+ E F +M + PN V ++ C+ G + AL+L M+ KG P YT++
Sbjct: 627 EEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSL 686
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++G + + ++AK +F +M+ G+ PN F YT L+ G K ++ EM
Sbjct: 687 IKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNV 746
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFL 321
PN T+ ++ G+ ++ + EA + + EKG + K+F+
Sbjct: 747 HPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFI 792
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 76/141 (53%), Gaps = 3/141 (2%)
Query: 161 ADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A E+ + MK G+ PN+ +++ G+ V+EA LF MR +G P + YTA+++
Sbjct: 664 ALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALID 723
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
GY K + + + R+M S + PN +YTV++ G + + +A EM E G P
Sbjct: 724 GYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVP 783
Query: 278 NVTTFVDLVEGFCKEQGIEEA 298
+ T+ + + G+ K+ G+ EA
Sbjct: 784 DSITYKEFIYGYLKQGGVLEA 804
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 70/136 (51%), Gaps = 3/136 (2%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E+A + + K G++P+ M+DG CK +E + F M K P V+Y +
Sbjct: 592 EEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL 651
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ Y ++ + A + M+ GISPN+ +YT L++G+ SR+++A EM G
Sbjct: 652 IRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGL 711
Query: 276 SPNVTTFVDLVEGFCK 291
PNV + L++G+ K
Sbjct: 712 EPNVFHYTALIDGYGK 727
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 3/166 (1%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA + K+M + G PN + ++D + G + +A+++ LM KG Y ++
Sbjct: 348 DAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLI 407
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+GY K +AD+A+R+ ++M S G + N S+T ++ LC A F EML S
Sbjct: 408 KGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMS 467
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
P L+ G CK +A + KGF V+ + L+
Sbjct: 468 PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLH 513
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 73/144 (50%), Gaps = 3/144 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A +M + GL P+ ++ GL V+EA++ + + G +P++ Y+ +
Sbjct: 557 DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVM 616
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++G KA + ++ + F +M S + PN Y L++ C+ RL A E +M G
Sbjct: 617 IDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI 676
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAK 299
SPN T+ L++G +EEAK
Sbjct: 677 SPNSATYTSLIKGMSIISRVEEAK 700
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 84/175 (48%), Gaps = 8/175 (4%)
Query: 147 TKSSNSNQPAMPEDA--DEIFKKMKET---GLIPNAVA---MLDGLCKDGLVQEALKLFG 198
T++SN+ + E DE F+ KE G + + V+ ++ G C + EA
Sbjct: 505 TRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLD 564
Query: 199 LMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCS 258
M ++G P+ Y+ ++ G +K ++A + + + NG+ P+ ++Y+V++ G CK
Sbjct: 565 EMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAE 624
Query: 259 RLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
R ++ EF EM+ PN + L+ +C+ + A + + KG + N
Sbjct: 625 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPN 679
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
++ GLCK G +AL+L+ KG + + A++ G +A K D+A RI +++
Sbjct: 475 TLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR 534
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
G + SY L+ G C +L +AF F EM++ G P+ T+ L+ G +EEA
Sbjct: 535 GCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEA 594
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Query: 159 EDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E+A +F++M+ GL PN A++DG K G + + L M K P + YT +
Sbjct: 697 EEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVM 756
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFE 265
+ GY + +A R+ +M+ GI P++ +Y + G K + +AF+
Sbjct: 757 IGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 93/208 (44%), Gaps = 14/208 (6%)
Query: 114 VANQLGDSFLDKFKLGFDNKAGNSSETNQSEEATKSSNSNQPAM--------PEDADEIF 165
V N L DSF++ G NKA + S+ + +S++ + ++A+ +
Sbjct: 367 VYNNLIDSFIEA---GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLL 423
Query: 166 KKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKA 222
K+M G N +++ LC + AL+ G M + P + T ++ G K
Sbjct: 424 KEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKH 483
Query: 223 HKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTF 282
K A ++ + + G + + L+ GLC+ +L +AF E+L G + ++
Sbjct: 484 GKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSY 543
Query: 283 VDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
L+ G C ++ ++EA + ++++G
Sbjct: 544 NTLISGCCGKKKLDEAFMFLDEMVKRGL 571
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 78/150 (52%), Gaps = 3/150 (2%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA + M E + PN V A++D K+G + EA KL M ++ P+ + Y ++
Sbjct: 311 DASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLI 370
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G+ ++ D+AK++F+ M S PN +Y L+ G CKC R++D E EM + G
Sbjct: 371 NGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLV 430
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLI 306
N T+ +++GF + + A+ K ++
Sbjct: 431 GNTVTYTTIIQGFFQAGDCDSAQMVFKQMV 460
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 84/158 (53%), Gaps = 3/158 (1%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A ++F +M+ G+ PN V ++++ LC G +A +L M EK P +V + A+
Sbjct: 275 EVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNAL 334
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++ + K K +A+++ +M I P+ +Y +L+ G C +RL +A + M+
Sbjct: 335 IDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDC 394
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
PN+ T+ L+ GFCK + +E+ + + ++G N
Sbjct: 395 LPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGN 432
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 78/143 (54%), Gaps = 3/143 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A ++FK M +PN +++G CK V++ ++LF M ++G + V YT +
Sbjct: 380 DEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTI 439
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++G+ +A D A+ +F++M SN + + +Y++L+ GLC +L A + ++
Sbjct: 440 IQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEM 499
Query: 276 SPNVTTFVDLVEGFCKEQGIEEA 298
N+ + ++EG CK + EA
Sbjct: 500 ELNIFIYNTMIEGMCKAGKVGEA 522
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 76/152 (50%), Gaps = 3/152 (1%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A + +M + G P+ V +++GLCK G + AL L M +VI+ ++
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTII 265
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+ K + A +F +M++ GI PN +Y L+ LC R DA MLE +
Sbjct: 266 DSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKIN 325
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
PNV TF L++ F KE + EA+ + +I++
Sbjct: 326 PNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR 357
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 3/165 (1%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A + KM+ + N V ++D LCK V+ A+ LF M KG P +V Y +++
Sbjct: 242 ALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 301
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
+ DA R+ M I+PN ++ L+ K +L +A + EM++ P
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP 361
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
+ T+ L+ GFC ++EAK K ++ K N + +N
Sbjct: 362 DTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLIN 406
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 78/155 (50%), Gaps = 8/155 (5%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
ED E+F++M + GL+ N V ++ G + G A +F M +I+ Y+ +
Sbjct: 415 EDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSIL 474
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFE-FCVEMLEAG 274
+ G K D A IF+ +Q + + N F Y +++G+CK ++ +A++ FC
Sbjct: 475 LHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFC----SLS 530
Query: 275 HSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
P+V T+ ++ G C ++ ++EA + + E G
Sbjct: 531 IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDG 565
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 65/121 (53%)
Query: 190 VQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTV 249
V +A+ LFG M + P IV + ++ K +K + + +MQ+ GIS + ++Y++
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 250 LVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
+ C+ S+L A +M++ G+ P++ T L+ G+C + I +A + ++E G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 310 F 310
+
Sbjct: 184 Y 184
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 3/152 (1%)
Query: 160 DADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA + +M E G P+ ++ GL EA+ L M ++G P++V Y VV
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 230
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G K D A + KM++ I N + ++ LCK ++ A + EM G
Sbjct: 231 NGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIR 290
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
PNV T+ L+ C +A + ++EK
Sbjct: 291 PNVVTYNSLINCLCNYGRWSDASRLLSNMLEK 322
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 74/152 (48%), Gaps = 9/152 (5%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A+++ ++M + + P+ + +++G C + EA ++F M K +P I Y ++
Sbjct: 346 EAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLI 405
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCK---CSRLQDAFEFCVEMLEA 273
G+ K + +D +FR+M G+ N +YT ++QG + C Q F+ +M+
Sbjct: 406 NGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFK---QMVSN 462
Query: 274 GHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTL 305
++ T+ L+ G C ++ A K L
Sbjct: 463 RVPTDIMTYSILLHGLCSYGKLDTALVIFKYL 494
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 3/165 (1%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A + KM + G P+ V ++L+G C + +A+ L M E G P+ +T ++
Sbjct: 137 ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH 196
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G +KA +A + +M G P+ +Y +V GLCK + A +M A
Sbjct: 197 GLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKA 256
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
NV F +++ CK + +E A + KG N +N
Sbjct: 257 NVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 301
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 61/118 (51%)
Query: 181 LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGI 240
++ C+ + AL + M + G P+IV ++++ GY + + DA + +M G
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 241 SPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
P+ F++T L+ GL ++ +A +M++ G P++ T+ +V G CK I+ A
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 6/161 (3%)
Query: 154 QPAMPEDADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIV 210
Q + A +FK+M + I +L GLC G + AL +F +++ I
Sbjct: 445 QAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIF 504
Query: 211 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 270
IY ++EG KA K +A +F + I P+ +Y ++ GLC LQ+A + +M
Sbjct: 505 IYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKM 561
Query: 271 LEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
E G PN T+ L+ ++ + IK + GF
Sbjct: 562 KEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFV 602
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 68/154 (44%), Gaps = 3/154 (1%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+DA ++F M ++ P+ V +L + K + + L M+ G ++ Y+
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ + + + A + KM G P+ + + L+ G C R+ DA +M+E G+
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
P+ TF L+ G EA + ++++G
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+ A IFK ++++ + N M++G+CK G V EA LF + K P++V Y +
Sbjct: 485 DTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK---PDVVTYNTM 541
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQG-LCKCSRLQDAFEFCVEMLEAG 274
+ G +A +FRKM+ +G PN+ +Y L++ L C R A E EM +G
Sbjct: 542 ISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASA-ELIKEMRSSG 600
Query: 275 HSPNVTTF 282
+ +T
Sbjct: 601 FVGDASTI 608
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 81/151 (53%), Gaps = 6/151 (3%)
Query: 147 TKSSNSNQPAMPE---DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLM 200
T SS N M + +A ++ + M +PN V +++G CK V + ++LF M
Sbjct: 360 TYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREM 419
Query: 201 REKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRL 260
++G + V YT ++ G+ +A D+A+ +F++M S G+ PN +Y +L+ GLCK +L
Sbjct: 420 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL 479
Query: 261 QDAFEFCVEMLEAGHSPNVTTFVDLVEGFCK 291
A + + P++ T+ ++EG CK
Sbjct: 480 AKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 510
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 84/158 (53%), Gaps = 3/158 (1%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+DA +F +M+ G+ PN + +++ LC G +A +L M E+ P +V ++A+
Sbjct: 270 DDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSAL 329
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++ + K K A++++ +M I PN F+Y+ L+ G C RL +A + M+
Sbjct: 330 IDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDC 389
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
PNV T+ L+ GFCK + +++ + + ++G N
Sbjct: 390 LPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGN 427
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 80/152 (52%), Gaps = 3/152 (1%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A + +M + G P+ V A+++GLCK G AL L M +VIY+ V+
Sbjct: 201 EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVI 260
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+ K DDA +F +M++ G+ PN +Y+ L+ LC R DA +M+E +
Sbjct: 261 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKIN 320
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
PN+ TF L++ F K+ + +A+ + +I++
Sbjct: 321 PNLVTFSALIDAFVKKGKLVKAEKLYEEMIKR 352
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 78/151 (51%), Gaps = 9/151 (5%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A++++++M + + PN ++++G C + EA ++ LM K +P +V Y ++
Sbjct: 342 AEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLIN 401
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCK---CSRLQDAFEFCVEMLEAG 274
G+ KA + D +FR+M G+ N +YT L+ G + C Q F+ +M+ G
Sbjct: 402 GFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK---QMVSVG 458
Query: 275 HSPNVTTFVDLVEGFCKEQGIEEAKGAIKTL 305
PN+ T+ L++G CK + +A + L
Sbjct: 459 VHPNILTYNILLDGLCKNGKLAKAMVVFEYL 489
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 3/153 (1%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA + M E + PN V A++D K G + +A KL+ M ++ P I Y++++
Sbjct: 306 DASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLI 365
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G+ + +AK++ M PN +Y L+ G CK R+ E EM + G
Sbjct: 366 NGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLV 425
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
N T+ L+ GF + + + A+ K ++ G
Sbjct: 426 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG 458
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 68/152 (44%), Gaps = 3/152 (1%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA + +M E G P+ V ++ GL EA+ L M ++G P++V Y AVV
Sbjct: 166 DAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVV 225
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G K D A + KM++ I N Y+ ++ LCK DA EM G
Sbjct: 226 NGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 285
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
PNV T+ L+ C +A + +IE+
Sbjct: 286 PNVITYSSLISCLCNYGRWSDASRLLSDMIER 317
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 65/121 (53%)
Query: 190 VQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTV 249
+ +A+ LFG+M + P I+ ++ ++ K +K D KM+ GIS N ++Y +
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 250 LVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
L+ C+CSRL A +M++ G+ P++ T L+ GFC I +A + ++E G
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 310 F 310
+
Sbjct: 179 Y 179
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 3/146 (2%)
Query: 167 KMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAH 223
KM + G P+ V ++L+G C + +A+ L M E G P+ V +T ++ G +
Sbjct: 138 KMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHN 197
Query: 224 KADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFV 283
KA +A + +M G P+ +Y +V GLCK A +M A NV +
Sbjct: 198 KASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYS 257
Query: 284 DLVEGFCKEQGIEEAKGAIKTLIEKG 309
+++ CK + ++A + KG
Sbjct: 258 TVIDSLCKYRHEDDALNLFTEMENKG 283
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 64/129 (49%), Gaps = 3/129 (2%)
Query: 166 KKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKA 222
+KM+ G+ N +++ C+ + AL L G M + G P+IV +++ G+
Sbjct: 102 EKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHG 161
Query: 223 HKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTF 282
++ DA + +M G P+ ++T L+ GL ++ +A M++ G P++ T+
Sbjct: 162 NRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTY 221
Query: 283 VDLVEGFCK 291
+V G CK
Sbjct: 222 GAVVNGLCK 230
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 39/217 (17%)
Query: 130 FDNKAGNSSETNQSEEATKSSNSNQPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCK 186
FD+ G N+ S Q +DA ++F +M+ +G P++VA +LDG CK
Sbjct: 221 FDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCK 280
Query: 187 DGLVQEALKLFGLMREKGTI-----------------------------------PEIVI 211
G + EA +L L + G + P+I++
Sbjct: 281 LGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIIL 340
Query: 212 YTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEML 271
YT +++G +KA K +DA ++ M S GISP+ + Y +++ LC L++ +EM
Sbjct: 341 YTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMS 400
Query: 272 EAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
E P+ T L+ C+ + EA+ I T IEK
Sbjct: 401 ETESFPDACTHTILICSMCRNGLVREAE-EIFTEIEK 436
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 3/155 (1%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA ++F M G+ PN V ++ GLC+ G +A KLF M+ G P+ V + A++
Sbjct: 216 DAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALL 275
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+G+ K + +A + R + +G Y+ L+ GL + R AFE ML+
Sbjct: 276 DGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIK 335
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
P++ + L++G K IE+A + ++ KG +
Sbjct: 336 PDIILYTILIQGLSKAGKIEDALKLLSSMPSKGIS 370
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 4/171 (2%)
Query: 156 AMPEDADEIFKKMKETGLIPNA----VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVI 211
M E A E F +MKE P+ V + + ++ A ++ M + P +
Sbjct: 141 GMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYT 200
Query: 212 YTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEML 271
+ +++G K + DA+++F M GISPN +YT+L+ GLC+ DA + EM
Sbjct: 201 FGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQ 260
Query: 272 EAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
+G+ P+ L++GFCK + EA ++ + GF + + ++
Sbjct: 261 TSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLID 311
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 87/185 (47%), Gaps = 44/185 (23%)
Query: 156 AMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEA----------------LKL 196
+ +A+EIF +++++G P+ A++DGLCK G ++EA L+L
Sbjct: 422 GLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRL 481
Query: 197 -------FGLMREKGTI----------------PEIVIYTAVVEGYTKAHKADDAKRIFR 233
F M E G+I P+IV Y ++ G+ +A D A ++
Sbjct: 482 SHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLN 541
Query: 234 KMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQ 293
+Q G+SP++ +Y L+ GL + R ++AF+ + HSP V + L+ C+++
Sbjct: 542 VLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAV--YRSLMTWSCRKR 599
Query: 294 GIEEA 298
+ A
Sbjct: 600 KVLVA 604
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 83/179 (46%), Gaps = 17/179 (9%)
Query: 156 AMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIY 212
+ E+ + +M ET P+A ++ +C++GLV+EA ++F + + G P + +
Sbjct: 387 GLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATF 446
Query: 213 TAVVEGYTKAHKADDAKRIFRKMQSNGISPNAF---------SYTVLVQGLCKCSRLQDA 263
A+++G K+ + +A+ + KM+ G + F S+ +V+ + A
Sbjct: 447 NALIDGLCKSGELKEARLLLHKMEV-GRPASLFLRLSHSGNRSFDTMVES----GSILKA 501
Query: 264 FEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
+ + G SP++ ++ L+ GFC+ I+ A + L KG + + +N
Sbjct: 502 YRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLIN 560
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 81/148 (54%), Gaps = 3/148 (2%)
Query: 163 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 219
E+F MKE G + + A ++DG CK G V +A +L M+ KG P +V Y +V++G
Sbjct: 573 ELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL 632
Query: 220 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNV 279
K + D+A +F + +S I N Y+ L+ G K R+ +A+ E+++ G +PN+
Sbjct: 633 AKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNL 692
Query: 280 TTFVDLVEGFCKEQGIEEAKGAIKTLIE 307
T+ L++ K + I EA +++ E
Sbjct: 693 YTWNSLLDALVKAEEINEALVCFQSMKE 720
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 3/159 (1%)
Query: 158 PEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 214
PE +F+++K +P+A + ++ GL K G E +LF M+E+G + + Y
Sbjct: 533 PEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNI 592
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
V++G+ K K + A ++ +M++ G P +Y ++ GL K RL +A+ E
Sbjct: 593 VIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKR 652
Query: 275 HSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
NV + L++GF K I+EA ++ L++KG N
Sbjct: 653 IELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPN 691
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 77/147 (52%), Gaps = 4/147 (2%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A +F++ K + N V +++DG K G + EA + + +KG P + + ++
Sbjct: 639 DEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSL 698
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++ KA + ++A F+ M+ +PN +Y +L+ GLCK + AF F EM + G
Sbjct: 699 LDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGM 758
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAI 302
P+ ++ ++ G K I EA GA+
Sbjct: 759 KPSTISYTTMISGLAKAGNIAEA-GAL 784
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 73/141 (51%), Gaps = 3/141 (2%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A ++ ++MK G P V +++DGL K + EA LF + K +VIY+++++
Sbjct: 606 AYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLID 665
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G+ K + D+A I ++ G++PN +++ L+ L K + +A M E +P
Sbjct: 666 GFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTP 725
Query: 278 NVTTFVDLVEGFCKEQGIEEA 298
N T+ L+ G CK + +A
Sbjct: 726 NQVTYGILINGLCKVRKFNKA 746
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 89/188 (47%), Gaps = 20/188 (10%)
Query: 164 IFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
+F++M+E G P ++ G K+G V AL L M+ +IV+Y ++ +
Sbjct: 190 LFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFG 249
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
K K D A + F ++++NG+ P+ +YT ++ LCK +RL +A E + + P
Sbjct: 250 KVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTY 309
Query: 281 TFVDLVEGFCKEQGIEE---------AKGAIKTLIEKGFAVN--------EKAVKDFLNK 323
+ ++ G+ +E AKG+I ++I + ++A+K F
Sbjct: 310 AYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM 369
Query: 324 KKPFSPSV 331
KK +P++
Sbjct: 370 KKDAAPNL 377
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 92/209 (44%), Gaps = 16/209 (7%)
Query: 93 DEVEKTTMKSDLGFQGRNRPDVANQLGDSFLDKFKLGFDNKAGNSSETNQSEEATKSSNS 152
DE+ ++ LG GR D A ++ + LD + TN + N
Sbjct: 446 DEITFCSLIDGLGKVGR--VDDAYKVYEKMLD-----------SDCRTNSIVYTSLIKNF 492
Query: 153 NQPAMPEDADEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEI 209
ED +I+K M P+ + +D + K G ++ +F ++ + +P+
Sbjct: 493 FNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDA 552
Query: 210 VIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVE 269
Y+ ++ G KA A++ +F M+ G + +Y +++ G CKC ++ A++ E
Sbjct: 553 RSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEE 612
Query: 270 MLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
M G P V T+ +++G K ++EA
Sbjct: 613 MKTKGFEPTVVTYGSVIDGLAKIDRLDEA 641
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 3/148 (2%)
Query: 165 FKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTK 221
F+ MKE PN V +++GLCK +A + M+++G P + YT ++ G K
Sbjct: 715 FQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAK 774
Query: 222 AHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTT 281
A +A +F + ++NG P++ Y +++GL +R DAF E G + T
Sbjct: 775 AGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKT 834
Query: 282 FVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
V L++ K +E+A L E G
Sbjct: 835 CVVLLDTLHKNDCLEQAAIVGAVLRETG 862
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 3/134 (2%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A I +++ + GL PN ++LD L K + EAL F M+E P V Y +
Sbjct: 674 DEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGIL 733
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ G K K + A +++MQ G+ P+ SYT ++ GL K + +A G
Sbjct: 734 INGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGG 793
Query: 276 SPNVTTFVDLVEGF 289
P+ + ++EG
Sbjct: 794 VPDSACYNAMIEGL 807
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 76/153 (49%), Gaps = 4/153 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A ++F++MK+ PN ++D LC+ G + A +L M++ G P + +
Sbjct: 360 DEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIM 418
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
V+ K+ K D+A +F +M +P+ ++ L+ GL K R+ DA++ +ML++
Sbjct: 419 VDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDC 478
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
N + L++ F E+ K +I +
Sbjct: 479 RTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQ 511
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 74/141 (52%), Gaps = 4/141 (2%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A + F +++ GL P+ V +M+ LCK + EA+++F + + +P Y ++
Sbjct: 257 AWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIM 316
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
GY A K D+A + + ++ G P+ +Y ++ L K ++ +A + EM + +P
Sbjct: 317 GYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAP 375
Query: 278 NVTTFVDLVEGFCKEQGIEEA 298
N++T+ L++ C+ ++ A
Sbjct: 376 NLSTYNILIDMLCRAGKLDTA 396
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 78/155 (50%), Gaps = 3/155 (1%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+DA ++++KM ++ N++ +++ G ++ K++ M + P++ +
Sbjct: 464 DDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTY 523
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++ KA + + + +F ++++ P+A SY++L+ GL K + +E M E G
Sbjct: 524 MDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGC 583
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
+ + +++GFCK + +A ++ + KGF
Sbjct: 584 VLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGF 618
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 53/105 (50%)
Query: 194 LKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQG 253
L LF M+E G P + ++T ++ G+ K + D A + +M+S+ + + Y V +
Sbjct: 188 LTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDS 247
Query: 254 LCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
K ++ A++F E+ G P+ T+ ++ CK ++EA
Sbjct: 248 FGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEA 292
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 62/140 (44%), Gaps = 3/140 (2%)
Query: 162 DEIFKKMKETGLIPN---AVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEG 218
D+I +M G P+ + M+ G K ++E + +MR+ P YT ++
Sbjct: 118 DQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGA 177
Query: 219 YTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPN 278
++ + +D +F++MQ G P +T L++G K R+ A EM + +
Sbjct: 178 FSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDAD 237
Query: 279 VTTFVDLVEGFCKEQGIEEA 298
+ + ++ F K ++ A
Sbjct: 238 IVLYNVCIDSFGKVGKVDMA 257
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 79/144 (54%), Gaps = 5/144 (3%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTI-PEIVIYTAV 215
+A + ++M G P+ V A+++GLCK G AL L M EKG I ++VIY +
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM-EKGKIEADVVIYNTI 256
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++G K DDA +F KM++ GI P+ F+Y L+ LC R DA +MLE
Sbjct: 257 IDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNI 316
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAK 299
+P++ F L++ F KE + EA+
Sbjct: 317 NPDLVFFNALIDAFVKEGKLVEAE 340
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 82/156 (52%), Gaps = 3/156 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A +FK+M G+ P+ + +LDGLC +G V+ AL +F M+++ +IV YT +
Sbjct: 408 DNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTM 467
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+E KA K +D +F + G+ PN +YT ++ G C+ ++A VEM E G
Sbjct: 468 IEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGP 527
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
PN T+ L+ ++ + IK + GFA
Sbjct: 528 LPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFA 563
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 83/154 (53%), Gaps = 4/154 (2%)
Query: 160 DADEIFKKM-KETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+A++++ +M K P+ VA ++ G CK V+E +++F M ++G + V YT +
Sbjct: 338 EAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTL 397
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ G+ +A D+A+ +F++M S+G+ P+ +Y +L+ GLC ++ A M +
Sbjct: 398 IHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDM 457
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
++ T+ ++E CK +E+ +L KG
Sbjct: 458 KLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKG 491
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 65/121 (53%)
Query: 190 VQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTV 249
+ +A+ LFG M + P IV ++ ++ K +K D + +MQ+ GIS N ++Y++
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 250 LVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
+ C+ S+L A +M++ G+ P++ T L+ GFC I EA + ++E G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 310 F 310
+
Sbjct: 176 Y 176
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 78/160 (48%), Gaps = 4/160 (2%)
Query: 158 PEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 214
P+ A + KM++ + + V ++DGLCK + +A LF M KG P++ Y
Sbjct: 231 PDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNP 290
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
++ + DA R+ M I+P+ + L+ K +L +A + EM+++
Sbjct: 291 LISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSK 350
Query: 275 HS-PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
H P+V + L++GFCK + +EE + + ++G N
Sbjct: 351 HCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 390
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 3/152 (1%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A + +M E G P+ V ++ GL + EA+ L M KG P++V Y AV+
Sbjct: 163 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI 222
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G K + D A + KM+ I + Y ++ GLCK + DAF+ +M G
Sbjct: 223 NGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIK 282
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
P+V T+ L+ C +A + ++EK
Sbjct: 283 PDVFTYNPLISCLCNYGRWSDASRLLSDMLEK 314
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 3/141 (2%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A I KM + G P+ V ++L+G C + EA+ L M E G P+ V +T +V
Sbjct: 129 ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVH 188
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G + +KA +A + +M G P+ +Y ++ GLCK A +M +
Sbjct: 189 GLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEA 248
Query: 278 NVTTFVDLVEGFCKEQGIEEA 298
+V + +++G CK + +++A
Sbjct: 249 DVVIYNTIIDGLCKYKHMDDA 269
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 68/132 (51%), Gaps = 13/132 (9%)
Query: 159 EDADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A +F+ M++ + I M++ LCK G V++ LF + KG P +V YT +
Sbjct: 443 ETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 502
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQD-----AFEFCVEM 270
+ G+ + ++A +F +M+ +G PN+ +Y L++ +RL+D + E EM
Sbjct: 503 MSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIR-----ARLRDGDEAASAELIKEM 557
Query: 271 LEAGHSPNVTTF 282
G + + +TF
Sbjct: 558 RSCGFAGDASTF 569
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 62/129 (48%), Gaps = 3/129 (2%)
Query: 166 KKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKA 222
++M+ G+ N ++ C+ + AL + G M + G P IV +++ G+
Sbjct: 99 EQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHG 158
Query: 223 HKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTF 282
++ +A + +M G P+ ++T LV GL + ++ +A M+ G P++ T+
Sbjct: 159 NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 218
Query: 283 VDLVEGFCK 291
++ G CK
Sbjct: 219 GAVINGLCK 227
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 80/150 (53%), Gaps = 1/150 (0%)
Query: 162 DEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTK 221
D + + + +IP +V ML GLCK G + EAL LF M+ G P++V Y+ V+ G K
Sbjct: 352 DMLSRGFELNSIIPCSV-MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCK 410
Query: 222 AHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTT 281
K D A ++ +M I PN+ ++ L+ GLC+ L +A ++ +G + ++
Sbjct: 411 LGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVL 470
Query: 282 FVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
+ +++G+ K IEEA K +IE G
Sbjct: 471 YNIVIDGYAKSGCIEEALELFKVVIETGIT 500
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 82/176 (46%), Gaps = 6/176 (3%)
Query: 154 QPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIV 210
Q M +A + + +G + V ++DG K G ++EAL+LF ++ E G P +
Sbjct: 445 QKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVA 504
Query: 211 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 270
+ +++ GY K +A++I ++ G++P+ SYT L+ C + E EM
Sbjct: 505 TFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREM 564
Query: 271 LEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLNKKKP 326
G P T+ + +G C+ E ++ E+ F ++ ++D ++ P
Sbjct: 565 KAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLR---ERIFEKCKQGLRDMESEGIP 617
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 3/158 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
EDA + + + P+ V+ ++ G CK G V A F + + G +P + + +
Sbjct: 204 EDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNIL 263
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ G +A + M +G+ P++ +Y +L +G + A+E +ML+ G
Sbjct: 264 INGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGL 323
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
SP+V T+ L+ G C+ I+ +K ++ +GF +N
Sbjct: 324 SPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELN 361
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 72/129 (55%), Gaps = 3/129 (2%)
Query: 164 IFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
++ +M + ++PN+ A+L GLC+ G++ EA L + G +IV+Y V++GY
Sbjct: 420 LYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYA 479
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
K+ ++A +F+ + GI+P+ ++ L+ G CK + +A + + G +P+V
Sbjct: 480 KSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVV 539
Query: 281 TFVDLVEGF 289
++ L++ +
Sbjct: 540 SYTTLMDAY 548
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 79/155 (50%), Gaps = 15/155 (9%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E+A E+FK + ETG+ P+ +++ G CK + EA K+ +++ G P +V YT +
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 544
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCK------CSRL--QDAFEFC 267
++ Y + R+M++ GI P +Y+V+ +GLC+ C+ + + FE C
Sbjct: 545 MDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKC 604
Query: 268 VE----MLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
+ M G P+ T+ +++ C+ + + A
Sbjct: 605 KQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGA 639
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 67/133 (50%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
++DGLC+ +++A+ K P +V + +++ GY K D AK F +
Sbjct: 192 TVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKC 251
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
G+ P+ +S+ +L+ GLC + +A E +M + G P+ T+ L +GF I A
Sbjct: 252 GLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGA 311
Query: 299 KGAIKTLIEKGFA 311
I+ +++KG +
Sbjct: 312 WEVIRDMLDKGLS 324
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 83/189 (43%), Gaps = 39/189 (20%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT--- 213
+A E+ M + G+ P++V + G G++ A ++ M +KG P+++ YT
Sbjct: 275 EALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILL 334
Query: 214 ---------------------------------AVVEGYTKAHKADDAKRIFRKMQSNGI 240
++ G K + D+A +F +M+++G+
Sbjct: 335 CGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGL 394
Query: 241 SPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKG 300
SP+ +Y++++ GLCK + A EM + PN T L+ G C++ + EA+
Sbjct: 395 SPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARS 454
Query: 301 AIKTLIEKG 309
+ +LI G
Sbjct: 455 LLDSLISSG 463
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 77/152 (50%), Gaps = 3/152 (1%)
Query: 168 MKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHK 224
M ++GL PN V ++ G C+ +QEA K+FG M+ P V Y ++ GY++
Sbjct: 299 MGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGD 358
Query: 225 ADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVD 284
+ A R + M NGI + +Y L+ GLCK ++ + A +F E+ + PN +TF
Sbjct: 359 HEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSA 418
Query: 285 LVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKA 316
L+ G C + + K++I G NE+
Sbjct: 419 LIMGQCVRKNADRGFELYKSMIRSGCHPNEQT 450
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 77/146 (52%), Gaps = 3/146 (2%)
Query: 163 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 219
E+ + M+ G V+ ++ G C+ GL+ ALKL +M + G P +V + ++ G+
Sbjct: 259 ELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGF 318
Query: 220 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNV 279
+A K +A ++F +M++ ++PN +Y L+ G + + AF F +M+ G ++
Sbjct: 319 CRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDI 378
Query: 280 TTFVDLVEGFCKEQGIEEAKGAIKTL 305
T+ L+ G CK+ +A +K L
Sbjct: 379 LTYNALIFGLCKQAKTRKAAQFVKEL 404
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 3/142 (2%)
Query: 160 DADEIFKKMKETGLIP---NAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A + F +MK+ G +P + A + L G V AL+ + MR P V+
Sbjct: 186 NATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVM 245
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
GY ++ K D + + M+ G SY L+ G C+ L A + M ++G
Sbjct: 246 SGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQ 305
Query: 277 PNVTTFVDLVEGFCKEQGIEEA 298
PNV TF L+ GFC+ ++EA
Sbjct: 306 PNVVTFNTLIHGFCRAMKLQEA 327
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 66/140 (47%), Gaps = 4/140 (2%)
Query: 161 ADEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A +++M+ + PN + + G C+ G + + ++L M G V Y ++
Sbjct: 222 ALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIA 281
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G+ + A ++ M +G+ PN ++ L+ G C+ +LQ+A + EM +P
Sbjct: 282 GHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAP 341
Query: 278 NVTTFVDLVEGFCKEQGIEE 297
N T+ L+ G+ +QG E
Sbjct: 342 NTVTYNTLINGY-SQQGDHE 360
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 77/152 (50%), Gaps = 3/152 (1%)
Query: 168 MKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHK 224
M ++GL PN V ++ G C+ +QEA K+FG M+ P V Y ++ GY++
Sbjct: 299 MGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGD 358
Query: 225 ADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVD 284
+ A R + M NGI + +Y L+ GLCK ++ + A +F E+ + PN +TF
Sbjct: 359 HEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSA 418
Query: 285 LVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKA 316
L+ G C + + K++I G NE+
Sbjct: 419 LIMGQCVRKNADRGFELYKSMIRSGCHPNEQT 450
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 77/146 (52%), Gaps = 3/146 (2%)
Query: 163 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 219
E+ + M+ G V+ ++ G C+ GL+ ALKL +M + G P +V + ++ G+
Sbjct: 259 ELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGF 318
Query: 220 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNV 279
+A K +A ++F +M++ ++PN +Y L+ G + + AF F +M+ G ++
Sbjct: 319 CRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDI 378
Query: 280 TTFVDLVEGFCKEQGIEEAKGAIKTL 305
T+ L+ G CK+ +A +K L
Sbjct: 379 LTYNALIFGLCKQAKTRKAAQFVKEL 404
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 3/142 (2%)
Query: 160 DADEIFKKMKETGLIP---NAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A + F +MK+ G +P + A + L G V AL+ + MR P V+
Sbjct: 186 NATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVM 245
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
GY ++ K D + + M+ G SY L+ G C+ L A + M ++G
Sbjct: 246 SGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQ 305
Query: 277 PNVTTFVDLVEGFCKEQGIEEA 298
PNV TF L+ GFC+ ++EA
Sbjct: 306 PNVVTFNTLIHGFCRAMKLQEA 327
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 66/140 (47%), Gaps = 4/140 (2%)
Query: 161 ADEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A +++M+ + PN + + G C+ G + + ++L M G V Y ++
Sbjct: 222 ALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIA 281
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G+ + A ++ M +G+ PN ++ L+ G C+ +LQ+A + EM +P
Sbjct: 282 GHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAP 341
Query: 278 NVTTFVDLVEGFCKEQGIEE 297
N T+ L+ G+ +QG E
Sbjct: 342 NTVTYNTLINGY-SQQGDHE 360
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 88/173 (50%), Gaps = 3/173 (1%)
Query: 147 TKSSNSNQPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREK 203
T +S N+ ++A + +M E G+ + V+ ++D CK+G V+EA +LF M K
Sbjct: 439 TIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSK 498
Query: 204 GTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDA 263
G P + Y ++ Y K K +A+++ M++NG+ P++++YT L+ G C + +A
Sbjct: 499 GVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEA 558
Query: 264 FEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKA 316
EM G N T+ ++ G K +EA G + KG+ ++ K
Sbjct: 559 MRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKV 611
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 76/157 (48%), Gaps = 9/157 (5%)
Query: 133 KAGNSSETNQSEEATKSSNSNQPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGL 189
K S TN + K N E+A +F +M G+ PNA+ M+ CK G
Sbjct: 466 KLSTVSYTNLIDVYCKEGN------VEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGK 519
Query: 190 VQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTV 249
++EA KL M G P+ YT+++ G A D+A R+F +M G+ N+ +YTV
Sbjct: 520 IKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTV 579
Query: 250 LVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLV 286
++ GL K + +AF EM G++ + + L+
Sbjct: 580 MISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 76/149 (51%), Gaps = 3/149 (2%)
Query: 164 IFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
+F ++ E GL P++ A++DG+CK G + A L M+ KG V++ +++GY
Sbjct: 351 LFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYC 410
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
+ D+A I+ M+ G + F+ + + R +A ++ M+E G +
Sbjct: 411 RKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTV 470
Query: 281 TFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
++ +L++ +CKE +EEAK + KG
Sbjct: 471 SYTNLIDVYCKEGNVEEAKRLFVEMSSKG 499
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 80/150 (53%), Gaps = 3/150 (2%)
Query: 164 IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
+ K MK+ G++ N V +++ K+G + +A KLF MRE+G ++ +YT+++
Sbjct: 281 VLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNC 340
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
+ A +F ++ G+SP++++Y L+ G+CK + A EM G +
Sbjct: 341 RKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQV 400
Query: 281 TFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
F L++G+C++ ++EA + +KGF
Sbjct: 401 VFNTLIDGYCRKGMVDEASMIYDVMEQKGF 430
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 74/142 (52%), Gaps = 3/142 (2%)
Query: 161 ADEIFKKMKETGL-IPNAV--AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A+ + +M+ G+ I V ++DG C+ G+V EA ++ +M +KG ++ +
Sbjct: 383 AEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIAS 442
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
+ + + D+AK+ +M G+ + SYT L+ CK +++A VEM G P
Sbjct: 443 CFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQP 502
Query: 278 NVTTFVDLVEGFCKEQGIEEAK 299
N T+ ++ +CK+ I+EA+
Sbjct: 503 NAITYNVMIYAYCKQGKIKEAR 524
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 77/152 (50%), Gaps = 3/152 (1%)
Query: 163 EIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 219
EIF++M ++G+ + + +++GLC+ G V+++ KL KG PE Y ++ Y
Sbjct: 210 EIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAY 269
Query: 220 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNV 279
K + + + M+ +G+ N +YT+L++ K ++ DA + EM E G +V
Sbjct: 270 VKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDV 329
Query: 280 TTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
+ L+ C++ ++ A L EKG +
Sbjct: 330 HVYTSLISWNCRKGNMKRAFLLFDELTEKGLS 361
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 65/132 (49%), Gaps = 8/132 (6%)
Query: 187 DGLVQEALKLFGLMREKG-TIPE---IVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISP 242
+G+ +E L++F M +KG +I E IV A K + D IFR+M +G+
Sbjct: 167 NGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAA----KKRRRIDLCLEIFRRMVDSGVKI 222
Query: 243 NAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAI 302
+S T++V+GLC+ ++ + + E G P T+ ++ + K++ +G +
Sbjct: 223 TVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVL 282
Query: 303 KTLIEKGFAVNE 314
K + + G N+
Sbjct: 283 KVMKKDGVVYNK 294
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 80/150 (53%), Gaps = 1/150 (0%)
Query: 162 DEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTK 221
D + + + +IP +V ML GLCK G + EAL LF M+ G P++V Y+ V+ G K
Sbjct: 352 DMLSRGFELNSIIPCSV-MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCK 410
Query: 222 AHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTT 281
K D A ++ +M I PN+ ++ L+ GLC+ L +A ++ +G + ++
Sbjct: 411 LGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVL 470
Query: 282 FVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
+ +++G+ K IEEA K +IE G
Sbjct: 471 YNIVIDGYAKSGCIEEALELFKVVIETGIT 500
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 82/176 (46%), Gaps = 6/176 (3%)
Query: 154 QPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIV 210
Q M +A + + +G + V ++DG K G ++EAL+LF ++ E G P +
Sbjct: 445 QKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVA 504
Query: 211 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 270
+ +++ GY K +A++I ++ G++P+ SYT L+ C + E EM
Sbjct: 505 TFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREM 564
Query: 271 LEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLNKKKP 326
G P T+ + +G C+ E ++ E+ F ++ ++D ++ P
Sbjct: 565 KAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLR---ERIFEKCKQGLRDMESEGIP 617
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 3/158 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
EDA + + + P+ V+ ++ G CK G V A F + + G +P + + +
Sbjct: 204 EDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNIL 263
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ G +A + M +G+ P++ +Y +L +G + A+E +ML+ G
Sbjct: 264 INGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGL 323
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
SP+V T+ L+ G C+ I+ +K ++ +GF +N
Sbjct: 324 SPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELN 361
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 72/129 (55%), Gaps = 3/129 (2%)
Query: 164 IFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
++ +M + ++PN+ A+L GLC+ G++ EA L + G +IV+Y V++GY
Sbjct: 420 LYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYA 479
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
K+ ++A +F+ + GI+P+ ++ L+ G CK + +A + + G +P+V
Sbjct: 480 KSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVV 539
Query: 281 TFVDLVEGF 289
++ L++ +
Sbjct: 540 SYTTLMDAY 548
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 79/155 (50%), Gaps = 15/155 (9%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E+A E+FK + ETG+ P+ +++ G CK + EA K+ +++ G P +V YT +
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 544
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCK------CSRL--QDAFEFC 267
++ Y + R+M++ GI P +Y+V+ +GLC+ C+ + + FE C
Sbjct: 545 MDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKC 604
Query: 268 VE----MLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
+ M G P+ T+ +++ C+ + + A
Sbjct: 605 KQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGA 639
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 67/133 (50%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
++DGLC+ +++A+ K P +V + +++ GY K D AK F +
Sbjct: 192 TVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKC 251
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
G+ P+ +S+ +L+ GLC + +A E +M + G P+ T+ L +GF I A
Sbjct: 252 GLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGA 311
Query: 299 KGAIKTLIEKGFA 311
I+ +++KG +
Sbjct: 312 WEVIRDMLDKGLS 324
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 83/189 (43%), Gaps = 39/189 (20%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT--- 213
+A E+ M + G+ P++V + G G++ A ++ M +KG P+++ YT
Sbjct: 275 EALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILL 334
Query: 214 ---------------------------------AVVEGYTKAHKADDAKRIFRKMQSNGI 240
++ G K + D+A +F +M+++G+
Sbjct: 335 CGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGL 394
Query: 241 SPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKG 300
SP+ +Y++++ GLCK + A EM + PN T L+ G C++ + EA+
Sbjct: 395 SPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARS 454
Query: 301 AIKTLIEKG 309
+ +LI G
Sbjct: 455 LLDSLISSG 463
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 82/153 (53%), Gaps = 3/153 (1%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A +IF +K+ GL+P++V M+ K G + EA+KL M E G P++++ +++
Sbjct: 486 EAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLI 545
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
KA + D+A ++F +M+ + P +Y L+ GL K ++Q+A E M++ G
Sbjct: 546 NTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCP 605
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
PN TF L + CK + A + +++ G
Sbjct: 606 PNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG 638
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 88/167 (52%), Gaps = 4/167 (2%)
Query: 161 ADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A +FK+M + G+ P+ ++D LC G V E L F ++E G P++V Y ++
Sbjct: 945 ACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIIN 1004
Query: 218 GYTKAHKADDAKRIFRKMQ-SNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G K+H+ ++A +F +M+ S GI+P+ ++Y L+ L +++A + E+ AG
Sbjct: 1005 GLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLE 1064
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLNK 323
PNV TF L+ G+ E A +T++ GF+ N + N+
Sbjct: 1065 PNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPNR 1111
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 96/198 (48%), Gaps = 11/198 (5%)
Query: 112 PDVA--NQLGDSF-----LDKFKLGFDNKAGNSSETNQSEEATKSSNSNQPAMPEDA-DE 163
PDVA N L D++ +D+ + + + E N S + +DA D
Sbjct: 818 PDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDL 877
Query: 164 IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
+ M + P A ++DGL K G + EA +LF M + G P IY ++ G+
Sbjct: 878 YYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFG 937
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
KA +AD A +F++M G+ P+ +Y+VLV LC R+ + + E+ E+G +P+V
Sbjct: 938 KAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVV 997
Query: 281 TFVDLVEGFCKEQGIEEA 298
+ ++ G K +EEA
Sbjct: 998 CYNLIINGLGKSHRLEEA 1015
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 81/152 (53%), Gaps = 3/152 (1%)
Query: 161 ADEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A E F+KMK G+ PN VA L L K G +EA ++F +++ G +P+ V Y +++
Sbjct: 452 ALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMK 511
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
Y+K + D+A ++ +M NG P+ L+ L K R+ +A++ + M E P
Sbjct: 512 CYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKP 571
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
V T+ L+ G K I+EA + +++KG
Sbjct: 572 TVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG 603
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 164 IFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
+ K+M+ GL PN + L + G + EA ++ M ++G P++V YT +++
Sbjct: 245 LLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALC 304
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
A K D AK +F KM++ P+ +Y L+ L +F EM + GH P+V
Sbjct: 305 TARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVV 364
Query: 281 TFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
TF LV+ CK EA + + ++G N
Sbjct: 365 TFTILVDALCKAGNFGEAFDTLDVMRDQGILPN 397
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 4/157 (2%)
Query: 157 MPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 213
M E A ++F ++K TG IP+ +LD K G + E +L+ M + +
Sbjct: 800 MIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHN 859
Query: 214 AVVEGYTKAHKADDAKRIFRKMQSN-GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 272
V+ G KA DDA ++ + S+ SP A +Y L+ GL K RL +A + ML+
Sbjct: 860 IVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLD 919
Query: 273 AGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
G PN + L+ GF K + A K ++++G
Sbjct: 920 YGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG 956
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 31/176 (17%)
Query: 108 GRNRPDVANQLGDSFLDKFKLGFDNKAGNSSETNQSEEATKSSNSNQPAMPEDADEIFKK 167
GR++PD + + LD+F DN+ +S + SE
Sbjct: 322 GRHKPDRVTYI--TLLDRFS---DNRDLDSVKQFWSE----------------------- 353
Query: 168 MKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHK 224
M++ G +P+ V ++D LCK G EA +MR++G +P + Y ++ G + H+
Sbjct: 354 MEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHR 413
Query: 225 ADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
DDA +F M+S G+ P A++Y V + K A E +M G +PN+
Sbjct: 414 LDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIV 469
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 78/151 (51%), Gaps = 4/151 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A ++F +MKE L P V +L GL K+G +QEA++LF M +KG P + + +
Sbjct: 555 DEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTL 614
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ K + A ++ KM G P+ F+Y ++ GL K ++++A F +M + +
Sbjct: 615 FDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVY 674
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLI 306
P+ T L+ G K IE+A I +
Sbjct: 675 -PDFVTLCTLLPGVVKASLIEDAYKIITNFL 704
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 75/138 (54%), Gaps = 3/138 (2%)
Query: 165 FKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTK 221
+KM+E G + NA + ++ L K EA++++ M +G P + Y++++ G K
Sbjct: 176 LRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGK 235
Query: 222 AHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTT 281
D + ++M++ G+ PN +++T+ ++ L + ++ +A+E M + G P+V T
Sbjct: 236 RRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVT 295
Query: 282 FVDLVEGFCKEQGIEEAK 299
+ L++ C + ++ AK
Sbjct: 296 YTVLIDALCTARKLDCAK 313
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 71/143 (49%), Gaps = 3/143 (2%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A ++ +M E G P+ + ++++ L K V EA K+F M+E P +V Y +
Sbjct: 520 DEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTL 579
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ G K K +A +F M G PN ++ L LCK + A + +M++ G
Sbjct: 580 LAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGC 639
Query: 276 SPNVTTFVDLVEGFCKEQGIEEA 298
P+V T+ ++ G K ++EA
Sbjct: 640 VPDVFTYNTIIFGLVKNGQVKEA 662
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 72/143 (50%), Gaps = 3/143 (2%)
Query: 159 EDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+DA E+F M+ G+ P A + +D K G AL+ F M+ KG P IV A
Sbjct: 415 DDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNAS 474
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ KA + +AK+IF ++ G+ P++ +Y ++++ K + +A + EM+E G
Sbjct: 475 LYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGC 534
Query: 276 SPNVTTFVDLVEGFCKEQGIEEA 298
P+V L+ K ++EA
Sbjct: 535 EPDVIVVNSLINTLYKADRVDEA 557
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 73/142 (51%), Gaps = 3/142 (2%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A EI K+M + G P+ V ++D LC + A ++F M+ P+ V Y ++
Sbjct: 276 EAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLL 335
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+ ++ D K+ + +M+ +G P+ ++T+LV LCK +AF+ M + G
Sbjct: 336 DRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGIL 395
Query: 277 PNVTTFVDLVEGFCKEQGIEEA 298
PN+ T+ L+ G + +++A
Sbjct: 396 PNLHTYNTLICGLLRVHRLDDA 417
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 81/154 (52%), Gaps = 5/154 (3%)
Query: 161 ADEIFKKM-KETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
A +F+K K+ G+ +P ++ GL + +++ A +F ++ G IP++ Y ++
Sbjct: 768 ARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLL 827
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEML-EAGH 275
+ Y K+ K D+ ++++M ++ N ++ +++ GL K + DA + +++ +
Sbjct: 828 DAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDF 887
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
SP T+ L++G K + EAK + +++ G
Sbjct: 888 SPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYG 921
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 4/152 (2%)
Query: 163 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLF-GLMREKGTIPEIVIYTAVVEG 218
E++K+M N + ++ GL K G V +AL L+ LM ++ P Y +++G
Sbjct: 841 ELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDG 900
Query: 219 YTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPN 278
+K+ + +AK++F M G PN Y +L+ G K A M++ G P+
Sbjct: 901 LSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPD 960
Query: 279 VTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
+ T+ LV+ C ++E K L E G
Sbjct: 961 LKTYSVLVDCLCMVGRVDEGLHYFKELKESGL 992
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 3/156 (1%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A E+F+KMK P+ V +LD + + + + M + G +P++V +T +V+
Sbjct: 312 AKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVD 371
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
KA +A M+ GI PN +Y L+ GL + RL DA E M G P
Sbjct: 372 ALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKP 431
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
T++ ++ + K A + + KG A N
Sbjct: 432 TAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPN 467
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 75/182 (41%), Gaps = 12/182 (6%)
Query: 139 ETNQSEEATKSSNSNQPAMPEDADEIFKKMKETGLIPNAV-------AMLDGLCKDGLVQ 191
+ + SEE T+ S P D D F K N V ML+ L DG ++
Sbjct: 81 DLSSSEEVTRGLKS----FP-DTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLE 135
Query: 192 EALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLV 251
E +F LM+++ + Y + + + A RKM+ G NA+SY L+
Sbjct: 136 EMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLI 195
Query: 252 QGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
L K +A E M+ G P++ T+ L+ G K + I+ G +K + G
Sbjct: 196 HLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLK 255
Query: 312 VN 313
N
Sbjct: 256 PN 257
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 83/147 (56%), Gaps = 4/147 (2%)
Query: 167 KMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAH 223
KM G+ PN + A+++G CK+ +++EAL +FG ++ +G +P +Y +++ Y K
Sbjct: 356 KMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLG 415
Query: 224 KADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFV 283
K DD + +M+ GI P+ +Y L+ GLC+ ++ A + ++ G P++ TF
Sbjct: 416 KIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFH 474
Query: 284 DLVEGFCKEQGIEEAKGAIKTLIEKGF 310
L+EG+C++ +A +K + + G
Sbjct: 475 ILMEGYCRKGESRKAAMLLKEMSKMGL 501
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 3/151 (1%)
Query: 163 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 219
++FK+M + + PN ++ +++GLC G + EA+ + M G P ++ Y A++ G+
Sbjct: 317 KVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGF 376
Query: 220 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNV 279
K +A +F ++ G P Y +L+ CK ++ D F EM G P+V
Sbjct: 377 CKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDV 436
Query: 280 TTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
T+ L+ G C+ IE AK L KG
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL 467
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 75/144 (52%), Gaps = 6/144 (4%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCK---DGLVQEALKLFGLMREKGTIPEIVIYTA 214
A ++ + MK G PN V+ ++DG CK +G + +A + M E P + +
Sbjct: 242 ARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNI 301
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
+++G+ K + ++F++M + PN SY L+ GLC ++ +A +M+ AG
Sbjct: 302 LIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAG 361
Query: 275 HSPNVTTFVDLVEGFCKEQGIEEA 298
PN+ T+ L+ GFCK ++EA
Sbjct: 362 VQPNLITYNALINGFCKNDMLKEA 385
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 88/159 (55%), Gaps = 5/159 (3%)
Query: 159 EDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+D + ++M+ G++P+ ++ GLC++G ++ A KLF + KG +P++V + +
Sbjct: 418 DDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHIL 476
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM-LEAG 274
+EGY + ++ A + ++M G+ P +Y ++++G CK L+ A +M E
Sbjct: 477 MEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERR 536
Query: 275 HSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
NV ++ L++G+ ++ +E+A + ++EKG N
Sbjct: 537 LRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPN 575
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 3/119 (2%)
Query: 207 PEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCS---RLQDA 263
P + + V+ K K + A+ + M+ G SPN SY L+ G CK ++ A
Sbjct: 221 PNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKA 280
Query: 264 FEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
EM+E SPN+TTF L++GF K+ + + K ++++ N + +N
Sbjct: 281 DAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLIN 339
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 76/157 (48%), Gaps = 17/157 (10%)
Query: 174 IPNAVAMLDGLCKDGLVQEALKL-------FGLMREK-------GTIPEIVIYTAVVEGY 219
I +A++M D +C + ++ + L L F L E G + ++
Sbjct: 139 IFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIAL 198
Query: 220 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNV 279
K +++ D + ++++M I PN F++ V++ LCK ++ A + +M G SPNV
Sbjct: 199 LKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNV 258
Query: 280 TTFVDLVEGFCKEQG---IEEAKGAIKTLIEKGFAVN 313
++ L++G+CK G + +A +K ++E + N
Sbjct: 259 VSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPN 295
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 85/163 (52%), Gaps = 3/163 (1%)
Query: 163 EIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 219
E+F +MK + P+ ++DGLCK + +A +LF M + +P ++ Y +++GY
Sbjct: 200 ELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGY 259
Query: 220 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNV 279
KA + + ++ +M+++ I P+ ++ L++GL K ++DA EM + G P+
Sbjct: 260 CKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDA 319
Query: 280 TTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
TF L +G+ + E A G +T ++ G +N LN
Sbjct: 320 FTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLN 362
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 87/193 (45%), Gaps = 38/193 (19%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDG-LVQEALKLFGL--------------- 199
E A+EI + GL+PN V M+DG C+ G LV +K+ +
Sbjct: 371 EKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCL 430
Query: 200 -------------------MREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGI 240
M+ KG P + Y ++ GY + ++ D I ++M+ NG
Sbjct: 431 IRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGT 490
Query: 241 SPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKG 300
PN SY L+ LCK S+L +A +M + G SP V + L++G C + IE+A
Sbjct: 491 MPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFR 550
Query: 301 AIKTLIEKGFAVN 313
K +++KG +N
Sbjct: 551 FSKEMLKKGIELN 563
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 3/130 (2%)
Query: 163 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 219
+I K+M++ G +PN V+ +++ LCK + EA + M ++G P++ IY +++G
Sbjct: 480 DILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGC 539
Query: 220 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNV 279
K +DA R ++M GI N +Y L+ GL +L +A + +E+ G P+V
Sbjct: 540 CSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDV 599
Query: 280 TTFVDLVEGF 289
T+ L+ G+
Sbjct: 600 FTYNSLISGY 609
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 86/156 (55%), Gaps = 3/156 (1%)
Query: 158 PEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 214
PE + ++ ++MK + P+ + +L GL K G+V++A + M++ G +P+ ++
Sbjct: 265 PEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSI 324
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
+ +GY+ KA+ A ++ +G+ NA++ ++L+ LCK +++ A E + G
Sbjct: 325 LFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKG 384
Query: 275 HSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
PN + +++G+C++ + A+ I+ + ++G
Sbjct: 385 LVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGM 420
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 3/155 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E+A++ KMK G+ P+ ++ G + + + M + GT+P +V Y +
Sbjct: 441 ENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTL 500
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ K K +A+ + R M+ G+SP Y +L+ G C +++DAF F EML+ G
Sbjct: 501 INCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGI 560
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
N+ T+ L++G + EA+ + + KG
Sbjct: 561 ELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGL 595
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 82/158 (51%), Gaps = 3/158 (1%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA+++F +M L+P+ + ++DG CK G +++ K+ M+ P ++ + ++
Sbjct: 232 DAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLL 291
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+G KA +DA+ + ++M+ G P+AF++++L G + + A +++G
Sbjct: 292 KGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVK 351
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNE 314
N T L+ CKE IE+A+ + + KG NE
Sbjct: 352 MNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNE 389
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 91/207 (43%), Gaps = 38/207 (18%)
Query: 154 QPAMPEDADEIFKKMKETGLIPNAVA---------------------------------- 179
+ M EDA+ + K+MK+ G +P+A
Sbjct: 296 KAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAY 355
Query: 180 ----MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKM 235
+L+ LCK+G +++A ++ G KG +P VIY +++GY + A+ M
Sbjct: 356 TCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAM 415
Query: 236 QSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGI 295
+ G+ P+ +Y L++ C+ +++A + +M G SP+V T+ L+ G+ ++
Sbjct: 416 EKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEF 475
Query: 296 EEAKGAIKTLIEKGFAVNEKAVKDFLN 322
++ +K + + G N + +N
Sbjct: 476 DKCFDILKEMEDNGTMPNVVSYGTLIN 502
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 70/142 (49%), Gaps = 3/142 (2%)
Query: 153 NQPAMPEDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEI 209
N+ M +A ++F ++ G+ P++ +LD L K + + +F + E P
Sbjct: 120 NESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSK 179
Query: 210 VIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVE 269
+Y ++ K +F +M+ + I P+ F Y VL+ GLCK R+ DA + E
Sbjct: 180 FMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDE 239
Query: 270 MLEAGHSPNVTTFVDLVEGFCK 291
ML P++ T+ L++G+CK
Sbjct: 240 MLARRLLPSLITYNTLIDGYCK 261
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 68/123 (55%), Gaps = 2/123 (1%)
Query: 190 VQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTV 249
V + L+LF M+ P + IY +++G K + +DA+++F +M + + P+ +Y
Sbjct: 195 VGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNT 254
Query: 250 LVQGLCKCSRLQDAFEFCVEMLEAGH-SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
L+ G CK + +F+ E ++A H P++ TF L++G K +E+A+ +K + +
Sbjct: 255 LIDGYCKAGNPEKSFKV-RERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDL 313
Query: 309 GFA 311
GF
Sbjct: 314 GFV 316
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 68/140 (48%), Gaps = 4/140 (2%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A + + M++ G+ P ++DG C G +++A + M +KG +V Y ++
Sbjct: 512 EAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLI 571
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+G + K +A+ + ++ G+ P+ F+Y L+ G +Q EM +G
Sbjct: 572 DGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIK 631
Query: 277 PNVTTFVDLVEGFCKEQGIE 296
P + T+ L+ C ++GIE
Sbjct: 632 PTLKTY-HLLISLCTKEGIE 650
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 69/152 (45%), Gaps = 5/152 (3%)
Query: 164 IFKKMKETGLIPN--AVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTK 221
++++MK +G+ P +L LC ++ +LFG M K P++++Y V+ Y
Sbjct: 621 LYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLK---PDLLVYNGVLHCYAV 677
Query: 222 AHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTT 281
+ A + ++M I + +Y L+ G K +L + EM P T
Sbjct: 678 HGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADT 737
Query: 282 FVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
+ +V+G C+ + A + + EKGF ++
Sbjct: 738 YNIIVKGHCEVKDYMSAYVWYREMQEKGFLLD 769
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 75/142 (52%), Gaps = 3/142 (2%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A + + +M + + PN V ++++GLC GL+ EA K+ ++ KG P V Y ++
Sbjct: 272 EAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLI 331
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
GY KA + DD +I M +G+ + F+Y L QG C+ + A + M+ G
Sbjct: 332 NGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVH 391
Query: 277 PNVTTFVDLVEGFCKEQGIEEA 298
P++ TF L++G C I +A
Sbjct: 392 PDMYTFNILLDGLCDHGKIGKA 413
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 63/119 (52%)
Query: 192 EALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLV 251
+AL LF M E +P IV ++ ++ K +K + +FR ++ GIS + +S+T L+
Sbjct: 62 DALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLI 121
Query: 252 QGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
C+C+RL A +M++ G P++ TF LV GFC EA + ++ G+
Sbjct: 122 DCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGY 180
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 81/166 (48%), Gaps = 3/166 (1%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A + ++ G PN V ++D LC+ G V AL + M++ G P++V Y +++
Sbjct: 167 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLI 226
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+ + RI M GISP+ +++ L+ K +L +A + EM++ +
Sbjct: 227 TRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVN 286
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
PN+ T+ L+ G C ++EAK + L+ KGF N +N
Sbjct: 287 PNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLIN 332
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 80/159 (50%), Gaps = 3/159 (1%)
Query: 156 AMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIY 212
+ ++A ++ + G PNAV +++G CK V + +K+ +M G + Y
Sbjct: 303 GLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTY 362
Query: 213 TAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 272
+ +GY +A K A+++ +M S G+ P+ +++ +L+ GLC ++ A ++ +
Sbjct: 363 NTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQK 422
Query: 273 AGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
+ + T+ +++G CK +E+A +L KG +
Sbjct: 423 SKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVS 461
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 70/149 (46%), Gaps = 3/149 (2%)
Query: 164 IFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
I M G+ P+ + A++D K+G + EA K + M ++ P IV Y +++ G
Sbjct: 241 ILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLC 300
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
D+AK++ + S G PNA +Y L+ G CK R+ D + M G +
Sbjct: 301 IHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTF 360
Query: 281 TFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
T+ L +G+C+ A+ + ++ G
Sbjct: 361 TYNTLYQGYCQAGKFSAAEKVLGRMVSCG 389
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 81/171 (47%), Gaps = 3/171 (1%)
Query: 131 DNKAGNSSETNQSEEATKSSNSNQPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKD 187
D G E N T + + A ++ K MK+ G+ P+ V +++ L
Sbjct: 173 DQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHS 232
Query: 188 GLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSY 247
G + ++ M G P+++ ++A+++ Y K + +AK+ + +M ++PN +Y
Sbjct: 233 GTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTY 292
Query: 248 TVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
L+ GLC L +A + ++ G PN T+ L+ G+CK + +++
Sbjct: 293 NSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDG 343
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 72/159 (45%), Gaps = 3/159 (1%)
Query: 167 KMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAH 223
KM + G P+ V ++++G C EA+ L + G P +VIY +++ +
Sbjct: 139 KMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKG 198
Query: 224 KADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFV 283
+ + A + + M+ GI P+ +Y L+ L + +M+ G SP+V TF
Sbjct: 199 QVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFS 258
Query: 284 DLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
L++ + KE + EAK +I++ N +N
Sbjct: 259 ALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLIN 297
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 53/97 (54%), Gaps = 3/97 (3%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A+++ +M G+ P+ +LDGLC G + +AL +++ T+ I+ Y +++
Sbjct: 378 AEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIK 437
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGL 254
G KA K +DA +F + G+SP+ +Y ++ GL
Sbjct: 438 GLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGL 474
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 69/154 (44%), Gaps = 3/154 (1%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA +F M E+ +P+ V +L + K + + LF + G ++ +T ++
Sbjct: 62 DALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLI 121
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+ + + + A KM G P+ ++ LV G C +R +A +++ G+
Sbjct: 122 DCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYE 181
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
PNV + +++ C++ + A +K + + G
Sbjct: 182 PNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGI 215
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 159 EDADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E +F+ ++ G+ + + ++D C+ + AL G M + G P IV + ++
Sbjct: 96 EAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSL 155
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
V G+ ++ +A + ++ G PN Y ++ LC+ ++ A + M + G
Sbjct: 156 VNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGI 215
Query: 276 SPNVTTFVDLV 286
P+V T+ L+
Sbjct: 216 RPDVVTYNSLI 226
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 3/160 (1%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A F KM G+ P ML G ++ AL+ F M+ +G P+ + ++
Sbjct: 239 AKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMIN 298
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G+ + K D+A+++F +M+ N I P+ SYT +++G R+ D EM +G P
Sbjct: 299 GFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEP 358
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAV 317
N TT+ L+ G C + EAK +K ++ K A + ++
Sbjct: 359 NATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSI 398
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 67/122 (54%)
Query: 178 VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQS 237
V +++ K G+VQE++K+F M++ G I Y ++ + + + AKR F KM S
Sbjct: 189 VVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVS 248
Query: 238 NGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEE 297
G+ P +Y +++ G RL+ A F +M G SP+ TF ++ GFC+ + ++E
Sbjct: 249 EGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDE 308
Query: 298 AK 299
A+
Sbjct: 309 AE 310
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 72/163 (44%), Gaps = 12/163 (7%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIP-EIVIYTA 214
+D IF++M+ +G+ PNA +L GLC G + EA + M K P + I+
Sbjct: 342 DDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLK 401
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE-- 272
++ +KA A + + M + + A Y VL++ CK S A + ++E
Sbjct: 402 LLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKE 461
Query: 273 --AGHSPNV----TTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
H + + + ++E C +A+ + L+++G
Sbjct: 462 IILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRG 504
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 4/159 (2%)
Query: 159 EDADEIFKKMK-ETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 214
++A+E+ +MK E PNAV ++DG C+ G ++ A ++ M+E P +V
Sbjct: 387 KEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNT 446
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
+V G + H + A F M+ G+ N +Y L+ C S ++ A + +MLEAG
Sbjct: 447 IVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAG 506
Query: 275 HSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
SP+ + L+ G C+ + +A ++ L E GF+++
Sbjct: 507 CSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLD 545
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 87/161 (54%), Gaps = 10/161 (6%)
Query: 159 EDADEIFKKMK----ETGLIPNAVA-----MLDGLCKDGLVQEALKLFGLMR-EKGTIPE 208
++A E+F+KM+ + G + A + ++DGLCK G ++EA +L M+ E+ P
Sbjct: 346 DEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPN 405
Query: 209 IVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCV 268
V Y +++GY +A K + AK + +M+ + I PN + +V G+C+ L A F +
Sbjct: 406 AVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFM 465
Query: 269 EMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
+M + G NV T++ L+ C +E+A + ++E G
Sbjct: 466 DMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAG 506
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 78/175 (44%), Gaps = 6/175 (3%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A E+ +MKE + PN V ++ G+C+ + A+ F M ++G +V Y +
Sbjct: 423 ETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTL 482
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ + A + KM G SP+A Y L+ GLC+ R DA ++ E G
Sbjct: 483 IHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGF 542
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF---AVNEKAVKDFLNKKKPF 327
S ++ + L+ FC + E+ + + ++G ++ + F K K F
Sbjct: 543 SLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDF 597
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 10/147 (6%)
Query: 162 DEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVI------Y 212
+++ KM E + P+ V + ++ LCK V EAL++F MR K T VI +
Sbjct: 314 NDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHF 373
Query: 213 TAVVEGYTKAHKADDAKRIFRKMQ-SNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEML 271
+++G K + +A+ + +M+ +PNA +Y L+ G C+ +L+ A E M
Sbjct: 374 NTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMK 433
Query: 272 EAGHSPNVTTFVDLVEGFCKEQGIEEA 298
E PNV T +V G C+ G+ A
Sbjct: 434 EDEIKPNVVTVNTIVGGMCRHHGLNMA 460
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 4/133 (3%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTI-PEIVIYTA 214
E + + ++M+E GL P A++D C G + EALKLF M + P VIY
Sbjct: 598 ESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNI 657
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
++ ++K A + +M+ + PN +Y L + L + ++ + + EM+E
Sbjct: 658 LINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQS 717
Query: 275 HSPNVTTFVDLVE 287
PN T L+E
Sbjct: 718 CEPNQITMEILME 730
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 69/150 (46%), Gaps = 3/150 (2%)
Query: 159 EDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A ++KM E G P+A A++ GLC+ +A+++ ++E G +++ Y +
Sbjct: 493 EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNML 552
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ + + + + M+ G P++ +Y L+ K + +M E G
Sbjct: 553 IGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTL 305
P VTT+ +++ +C ++EA K +
Sbjct: 613 DPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 81/155 (52%), Gaps = 2/155 (1%)
Query: 181 LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGI 240
+DGLCK G + +A++ + G +P+ V YT V+ GY + + A+ ++ +M +
Sbjct: 522 IDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRL 581
Query: 241 SPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKG 300
P+ +Y VL+ G K RL+ AF++ EM + G PNV T L+ G CK I+EA
Sbjct: 582 YPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYR 641
Query: 301 AIKTLIEKGFAVNEKAVKDFLNKKKPFSPSVWEAI 335
+ + E+G N+ + ++K F WE +
Sbjct: 642 YLCKMEEEGIPPNKYSYTMLISKNCDFEK--WEEV 674
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 103/220 (46%), Gaps = 7/220 (3%)
Query: 93 DEVEKTTMKSDLGFQGRNRPDVANQLGDSFLDK-FKLGFDNKAGNSSETNQSEEATKSSN 151
DE+ + +K D G+ R +LGDS DK F+L + A + + + +
Sbjct: 468 DEMLRKGIKPD-GYAYTTRAVGELRLGDS--DKAFRLHEEMVATDHHAPDLTIYNVRIDG 524
Query: 152 SNQPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPE 208
+ A E +K+ GL+P+ V ++ G ++G + A L+ M K P
Sbjct: 525 LCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPS 584
Query: 209 IVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCV 268
++ Y ++ G+ KA + + A + +M+ G+ PN ++ L+ G+CK + +A+ +
Sbjct: 585 VITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLC 644
Query: 269 EMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
+M E G PN ++ L+ C + EE K +++K
Sbjct: 645 KMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDK 684
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 75/152 (49%), Gaps = 3/152 (1%)
Query: 157 MPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 213
M A +++ M E G++P + MLD K G ++ K++ M+ + V Y
Sbjct: 218 MMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYN 277
Query: 214 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 273
++ G++K K ++A+R M+ +G + +S+ L++G CK DA+ EML A
Sbjct: 278 ILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNA 337
Query: 274 GHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTL 305
G P +T+ + C I++A+ + ++
Sbjct: 338 GIYPTTSTYNIYICALCDFGRIDDARELLSSM 369
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 75/167 (44%), Gaps = 12/167 (7%)
Query: 159 EDADEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+DA + +M G+ P + LC G + +A +L M P++V Y +
Sbjct: 325 DDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVSYNTL 380
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ GY K K +A +F +++ I P+ +Y L+ GLC+ L+ A EM
Sbjct: 381 MHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLI 440
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK-----GFAVNEKAV 317
P+V T+ LV+GF K + A ++ K G+A +AV
Sbjct: 441 FPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAV 487
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 69/136 (50%), Gaps = 4/136 (2%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A +F ++ + P+ V ++DGLC+ G ++ A +L M + P+++ YT +V
Sbjct: 392 EASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLV 451
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA-GH 275
+G+ K A ++ +M GI P+ ++YT G + AF EM+ H
Sbjct: 452 KGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHH 511
Query: 276 SPNVTTFVDLVEGFCK 291
+P++T + ++G CK
Sbjct: 512 APDLTIYNVRIDGLCK 527
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 64/124 (51%), Gaps = 3/124 (2%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A ++ +M L P+ + ++ G K G +++A + M+++G P ++ + A++
Sbjct: 569 ARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLY 628
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G KA D+A R KM+ GI PN +SYT+L+ C + ++ + EML+ P
Sbjct: 629 GMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEP 688
Query: 278 NVTT 281
+ T
Sbjct: 689 DGYT 692
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 74/148 (50%), Gaps = 3/148 (2%)
Query: 165 FKKMKETGLIP---NAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTK 221
F+KM G +P N +L L ++ +A ++ M E G +P ++ + +++ K
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 222 AHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTT 281
A + +I+ +M+ I + +Y +L+ G K ++++A F +M +G + +
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 310
Query: 282 FVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
F L+EG+CK+ ++A G ++ G
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAG 338
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 88/176 (50%), Gaps = 7/176 (3%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+ D+ +KM+E G P+ V ++ C+ G ++EA L+ +M + +P++V YT+++
Sbjct: 254 EVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLI 313
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+G K + +A + F +M GI P+ SY L+ CK +Q + + EML
Sbjct: 314 KGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVV 373
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTL----IEKGFAVNEKAVKDFLNKKKPFS 328
P+ T +VEGF +E + A + L ++ F V + + + KPF+
Sbjct: 374 PDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFA 429
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 77/151 (50%), Gaps = 3/151 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
ED +++ M G+ PN + + C D +E M E+G P++V Y +
Sbjct: 218 EDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTL 277
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
V Y + + +A +++ M + P+ +YT L++GLCK R+++A + M++ G
Sbjct: 278 VSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGI 337
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLI 306
P+ ++ L+ +CKE ++++K + ++
Sbjct: 338 KPDCMSYNTLIYAYCKEGMMQQSKKLLHEML 368
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/120 (20%), Positives = 53/120 (44%)
Query: 190 VQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTV 249
+++ +++ +M G P + + + + KM+ G P+ +Y
Sbjct: 217 MEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNT 276
Query: 250 LVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
LV C+ RL++AF M P++ T+ L++G CK+ + EA ++++G
Sbjct: 277 LVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRG 336
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 2/162 (1%)
Query: 161 ADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
A+ I KK++ T + +++ G C G + +AL+L+ M KG P I +T ++ G
Sbjct: 461 AEMINKKLEPT--VVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLF 518
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
+A DA ++F +M + PN +Y V+++G C+ + AFEF EM E G P+
Sbjct: 519 RAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTY 578
Query: 281 TFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
++ L+ G C EAK + L + +NE L+
Sbjct: 579 SYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLH 620
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 79/153 (51%), Gaps = 5/153 (3%)
Query: 161 ADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A ++ +M G+ P+ +L GL + GL+++A+KLF M E P V Y ++E
Sbjct: 491 ALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIE 550
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
GY + A ++M GI P+ +SY L+ GLC + +A F V+ L G+
Sbjct: 551 GYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVF-VDGLHKGNCE 609
Query: 278 -NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
N + L+ GFC+E +EEA + ++++G
Sbjct: 610 LNEICYTGLLHGFCREGKLEEALSVCQEMVQRG 642
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 82/156 (52%), Gaps = 3/156 (1%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+ A +M +TGL + ++++G CK G + A M K P +V YT++
Sbjct: 419 DTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSL 478
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ GY K + A R++ +M GI+P+ +++T L+ GL + ++DA + EM E
Sbjct: 479 MGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNV 538
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
PN T+ ++EG+C+E + +A +K + EKG
Sbjct: 539 KPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIV 574
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 71/130 (54%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
++++GL K G ++EAL L + + G P + +Y A+++ K K +A+ +F +M
Sbjct: 337 SLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKI 396
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
G+ PN +Y++L+ C+ +L A F EM++ G +V + L+ G CK I A
Sbjct: 397 GLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAA 456
Query: 299 KGAIKTLIEK 308
+G + +I K
Sbjct: 457 EGFMAEMINK 466
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 3/168 (1%)
Query: 146 ATKSSNSNQPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMRE 202
T S + + DA ++F +M E + PN V M++G C++G + +A + M E
Sbjct: 511 TTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTE 570
Query: 203 KGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQD 262
KG +P+ Y ++ G +A +AK + N YT L+ G C+ +L++
Sbjct: 571 KGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEE 630
Query: 263 AFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
A C EM++ G ++ + L++G K + + G +K + ++G
Sbjct: 631 ALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGL 678
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 38/185 (20%)
Query: 164 IFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
+ K+M + GL P+ V +M+D K G +EA ++ LM +G +P V YTAV+ G
Sbjct: 669 LLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLC 728
Query: 221 KAHKADDAKRIFRKMQ-----------------------------------SNGISPNAF 245
KA ++A+ + KMQ G+ N
Sbjct: 729 KAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTA 788
Query: 246 SYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTL 305
+Y +L++G C+ R+++A E M+ G SP+ T+ ++ C+ +++A ++
Sbjct: 789 TYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSM 848
Query: 306 IEKGF 310
EKG
Sbjct: 849 TEKGI 853
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 3/156 (1%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E+A + K++ + G+ PN A++D LCK EA LF M + G P V Y+ +
Sbjct: 349 EEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSIL 408
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++ + + K D A +M G+ + + Y L+ G CK + A F EM+
Sbjct: 409 IDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKL 468
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
P V T+ L+ G+C + I +A + KG A
Sbjct: 469 EPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIA 504
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 75/166 (45%), Gaps = 4/166 (2%)
Query: 160 DADEIFKKM-KETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
D +FK M + L+P A+L GL K A++LF M G P++ IYT V
Sbjct: 174 DGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGV 233
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ + AK + M++ G N Y VL+ GLCK ++ +A ++
Sbjct: 234 IRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDL 293
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFL 321
P+V T+ LV G CK Q E + ++ F+ +E AV +
Sbjct: 294 KPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLV 339
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 6/173 (3%)
Query: 161 ADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A E+F M G+ P+ ++ LC+ + A ++ M G IV Y +++
Sbjct: 211 AMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLID 270
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G K K +A I + + + P+ +Y LV GLCK + E EML SP
Sbjct: 271 GLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSP 330
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN---EKAVKDFLNKKKPF 327
+ LVEG K IEEA +K +++ G + N A+ D L K + F
Sbjct: 331 SEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKF 383
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 3/143 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+A+ +F +M + GL PN V ++D C+ G + AL G M + G + Y ++
Sbjct: 384 HEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSL 443
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ G+ K A+ +M + + P +YT L+ G C ++ A EM G
Sbjct: 444 INGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI 503
Query: 276 SPNVTTFVDLVEGFCKEQGIEEA 298
+P++ TF L+ G + I +A
Sbjct: 504 APSIYTFTTLLSGLFRAGLIRDA 526
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 84/205 (40%), Gaps = 38/205 (18%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIY----- 212
A E+ M+ TG N V ++DGLCK V EA+ + + K P++V Y
Sbjct: 246 AKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVY 305
Query: 213 ------------------------------TAVVEGYTKAHKADDAKRIFRKMQSNGISP 242
+++VEG K K ++A + +++ G+SP
Sbjct: 306 GLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSP 365
Query: 243 NAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAI 302
N F Y L+ LCK + +A M + G PN T+ L++ FC+ ++ A +
Sbjct: 366 NLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFL 425
Query: 303 KTLIEKGFAVNEKAVKDFLNKKKPF 327
+++ G ++ +N F
Sbjct: 426 GEMVDTGLKLSVYPYNSLINGHCKF 450
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 80/196 (40%), Gaps = 38/196 (19%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMRE------------- 202
++A I+ M G +PN V A+++GLCK G V EA L M+
Sbjct: 699 KEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCF 758
Query: 203 ----------------------KGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGI 240
KG + Y ++ G+ + + ++A + +M +G+
Sbjct: 759 LDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGV 818
Query: 241 SPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKG 300
SP+ +YT ++ LC+ + ++ A E M E G P+ + L+ G C + +A
Sbjct: 819 SPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATE 878
Query: 301 AIKTLIEKGFAVNEKA 316
++ +G N K
Sbjct: 879 LRNEMLRQGLIPNNKT 894
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 75/175 (42%), Gaps = 44/175 (25%)
Query: 181 LDGLCKDGLVQEALK------LFGLMRE---KGTIPEIVIYTAVVEGYTKAHKADDAKRI 231
LD +C L+ +LK FGL++E +G P+ VIYT++++ +K +A I
Sbjct: 645 LDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGI 704
Query: 232 FRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTF--------- 282
+ M + G PN +YT ++ GLCK + +A C +M PN T+
Sbjct: 705 WDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK 764
Query: 283 --VD------------------------LVEGFCKEQGIEEAKGAIKTLIEKGFA 311
VD L+ GFC++ IEEA I +I G +
Sbjct: 765 GEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVS 819
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 78/167 (46%), Gaps = 7/167 (4%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLF--GLMREKGTIPEIVIYTAV 215
A E K+M E G++P+ + ++ GLC G EA K+F GL + + EI YT +
Sbjct: 561 AFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGLHKGNCELNEIC-YTGL 618
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ G+ + K ++A + ++M G+ + Y VL+ G K + F EM + G
Sbjct: 619 LHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGL 678
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
P+ + +++ K +EA G +I +G NE +N
Sbjct: 679 KPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVIN 725
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 6/179 (3%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++ +EI M +T P + +++GLCK L+ A+ F M E+ +P+IV Y V
Sbjct: 331 DEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTV 390
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ +K DDA + +++ P +Y ++ GL K ++ A E +ML+AG
Sbjct: 391 LGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGI 450
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAV---NEKAVKDFLNKKKPFSPSV 331
P+ T L+ GFC+ +EEA +K +G + + V L KKK ++
Sbjct: 451 FPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAI 509
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 79/175 (45%), Gaps = 5/175 (2%)
Query: 164 IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
I + M +G +P+ + ++ LCK G ++ AL L M G+ P+++ Y V+
Sbjct: 161 ILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMF 220
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
A+ A R ++ NG P +YTVLV+ +C+ A E +M G P++
Sbjct: 221 DYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIV 280
Query: 281 TFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLNKKKPFSPSVWEAI 335
T+ LV C+ +EE I+ ++ G +N L+ S W+ +
Sbjct: 281 TYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSL--CSHEYWDEV 333
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 80/143 (55%), Gaps = 4/143 (2%)
Query: 156 AMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIY 212
M +DA E+ +K T P + +++DGL K GL+++AL+L+ M + G P+ +
Sbjct: 398 GMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITR 457
Query: 213 TAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 272
+++ G+ +A+ ++A ++ ++ + G +Y +++QGLCK ++ A E ML
Sbjct: 458 RSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLT 517
Query: 273 AGHSPNVTTFVDLVEGFCKEQGI 295
G P+ T + +V+G +E G+
Sbjct: 518 GGCKPDETIYTAIVKGV-EEMGM 539
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 80/152 (52%), Gaps = 3/152 (1%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A + F +M E +P+ V +L + K+G+V +A++L GL++ P ++ Y +V++
Sbjct: 368 AIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVID 427
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G K A ++ +M GI P+ + L+ G C+ + +++A + E G+
Sbjct: 428 GLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGI 487
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
+T+ +++G CK++ IE A ++ ++ G
Sbjct: 488 RGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGG 519
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 72/170 (42%), Gaps = 6/170 (3%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A E+ + M G P+ V ++++ C+ G ++E + + G V Y ++
Sbjct: 263 AIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLH 322
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
D+ + I M P +Y +L+ GLCK L A +F +MLE P
Sbjct: 323 SLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLP 382
Query: 278 NVTTFVDLVEGFCKEQGIEEA---KGAIKTLIEKGFAVNEKAVKDFLNKK 324
++ T+ ++ KE +++A G +K + +V D L KK
Sbjct: 383 DIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKK 432
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 67/152 (44%), Gaps = 10/152 (6%)
Query: 141 NQSEEATKSSNSNQPAMPEDADEIFKKMKETGLIPNAVA----------MLDGLCKDGLV 190
N ++ A +SS + + + K MK+ GL + +L LC +G +
Sbjct: 61 NVNDHAERSSEFHHYGVGTNLRARVKPMKQFGLSSDGPITENDEETNNEILHNLCSNGKL 120
Query: 191 QEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVL 250
+A KL +M +P + +V G + + D A I R M +G P+ +Y ++
Sbjct: 121 TDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMI 180
Query: 251 VQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTF 282
+ LCK ++ A +M +G P+V T+
Sbjct: 181 IGNLCKKGHIRTALVLLEDMSLSGSPPDVITY 212
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 76/143 (53%), Gaps = 3/143 (2%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E+A +I ++M G+ + V A+L G K G E K+F M+ + +P ++ Y+ +
Sbjct: 461 EEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTL 520
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++GY+K +A IFR+ +S G+ + Y+ L+ LCK + A EM + G
Sbjct: 521 IDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGI 580
Query: 276 SPNVTTFVDLVEGFCKEQGIEEA 298
SPNV T+ +++ F + ++ +
Sbjct: 581 SPNVVTYNSIIDAFGRSATMDRS 603
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 110/247 (44%), Gaps = 15/247 (6%)
Query: 90 GNRDEVEKTTMKSDLGFQGRNRPDVANQLGDSFLDKF---------KLGFDNK-AGNSSE 139
GNR+E +K + + R + +L + + K F+ AG
Sbjct: 207 GNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGN 266
Query: 140 TNQSEEATKSSNSNQPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGL-VQEALK 195
T + A S+ + + E+A +F MKE GL PN V A++D K G+ ++ K
Sbjct: 267 TVYAFSALISA-YGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAK 325
Query: 196 LFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLC 255
F M+ G P+ + + +++ ++ + A+ +F +M + I + FSY L+ +C
Sbjct: 326 FFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAIC 385
Query: 256 KCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEK 315
K ++ AFE +M PNV ++ +++GF K +EA + G A++
Sbjct: 386 KGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRV 445
Query: 316 AVKDFLN 322
+ L+
Sbjct: 446 SYNTLLS 452
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 72/141 (51%), Gaps = 3/141 (2%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A EI +M ++PN V+ ++DG K G EAL LFG MR G + V Y ++
Sbjct: 393 AFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLS 452
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
YTK ++++A I R+M S GI + +Y L+ G K + + + EM P
Sbjct: 453 IYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLP 512
Query: 278 NVTTFVDLVEGFCKEQGIEEA 298
N+ T+ L++G+ K +EA
Sbjct: 513 NLLTYSTLIDGYSKGGLYKEA 533
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 3/158 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A +F +M+ G+ + V+ +L K G +EAL + M G ++V Y A+
Sbjct: 426 DEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNAL 485
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ GY K K D+ K++F +M+ + PN +Y+ L+ G K ++A E E AG
Sbjct: 486 LGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGL 545
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
+V + L++ CK + A I + ++G + N
Sbjct: 546 RADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPN 583
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 65/120 (54%)
Query: 180 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 239
+LD +CK G + A ++ M K +P +V Y+ V++G+ KA + D+A +F +M+ G
Sbjct: 380 LLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLG 439
Query: 240 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAK 299
I+ + SY L+ K R ++A + EM G +V T+ L+ G+ K+ +E K
Sbjct: 440 IALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVK 499
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 59/111 (53%), Gaps = 3/111 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++ ++F +MK ++PN + ++DG K GL +EA+++F + G ++V+Y+A+
Sbjct: 496 DEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSAL 555
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEF 266
++ K A + +M GISPN +Y ++ + + + + ++
Sbjct: 556 IDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADY 606
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 3/151 (1%)
Query: 163 EIFKKMKETGLIPNAVAM--LDGLC-KDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 219
+ F +M+ G+ P+ + L +C + GL + A LF M + ++ Y +++
Sbjct: 325 KFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAI 384
Query: 220 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNV 279
K + D A I +M I PN SY+ ++ G K R +A EM G + +
Sbjct: 385 CKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDR 444
Query: 280 TTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
++ L+ + K EEA ++ + G
Sbjct: 445 VSYNTLLSIYTKVGRSEEALDILREMASVGI 475
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 72/132 (54%), Gaps = 3/132 (2%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A E+ K+M E G+ PN ML G + G ++ A + F M+++ ++V YT VV
Sbjct: 214 ALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVH 273
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G+ A + A+ +F +M G+ P+ +Y ++Q LCK +++A EM+ G+ P
Sbjct: 274 GFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEP 333
Query: 278 NVTTFVDLVEGF 289
NVTT+ L+ G
Sbjct: 334 NVTTYNVLIRGL 345
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 81/155 (52%), Gaps = 4/155 (2%)
Query: 158 PEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 214
P+ A ++F M E G + + +LD LCK V++A +LF +R + ++ + V Y
Sbjct: 142 PDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSV-DTVTYNV 200
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
++ G+ + A + ++M GI+PN +Y +++G + +++ A+EF +EM +
Sbjct: 201 ILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRD 260
Query: 275 HSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
+V T+ +V GF I+ A+ +I +G
Sbjct: 261 CEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREG 295
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 65/131 (49%), Gaps = 3/131 (2%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A +F +M G++P+ AM+ LCK V+ A+ +F M +G P + Y ++
Sbjct: 284 ARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIR 343
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G A + + + ++M++ G PN +Y ++++ +CS ++ A +M P
Sbjct: 344 GLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLP 403
Query: 278 NVTTFVDLVEG 288
N+ T+ L+ G
Sbjct: 404 NLDTYNILISG 414
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 65/148 (43%), Gaps = 3/148 (2%)
Query: 161 ADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A E F +MK+ + ++ G G ++ A +F M +G +P + Y A+++
Sbjct: 249 AWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQ 308
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
K ++A +F +M G PN +Y VL++GL E M G P
Sbjct: 309 VLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEP 368
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTL 305
N T+ ++ + + +E+A G + +
Sbjct: 369 NFQTYNMMIRYYSECSEVEKALGLFEKM 396
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 1/118 (0%)
Query: 196 LFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLC 255
L MR P + V E Y A K D A ++F M +G + S+ ++ LC
Sbjct: 113 LIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLC 172
Query: 256 KCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
K R++ A+E L S + T+ ++ G+C + +A +K ++E+G N
Sbjct: 173 KSKRVEKAYEL-FRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPN 229
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 97/193 (50%), Gaps = 8/193 (4%)
Query: 154 QPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIV 210
+ + E+A+ +F+ +KE L+ + ++DG C+ G +++A+++ M E G
Sbjct: 308 KKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTT 367
Query: 211 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 270
I +++ GY K+ + +A++IF +M + P+ +Y LV G C+ + +A + C +M
Sbjct: 368 ICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQM 427
Query: 271 LEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN---KKKPF 327
+ P V T+ L++G+ + + K ++++G +E + L K F
Sbjct: 428 CQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDF 487
Query: 328 SPS--VWEAIFGK 338
+ + +WE + +
Sbjct: 488 NEAMKLWENVLAR 500
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 81/159 (50%), Gaps = 6/159 (3%)
Query: 146 ATKSSNSNQPAMPEDAD---EIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGL 199
T +S N AM D + + + M E G+ N V +++ G CK GL++EA +F L
Sbjct: 262 VTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFEL 321
Query: 200 MREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSR 259
++EK + + +Y +++GY + + DA R+ M G+ N L+ G CK +
Sbjct: 322 LKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQ 381
Query: 260 LQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
L +A + M + P+ T+ LV+G+C+ ++EA
Sbjct: 382 LVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEA 420
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 72/143 (50%), Gaps = 4/143 (2%)
Query: 173 LIPNAVAM---LDGLCKDGLVQEALKLFG-LMREKGTIPEIVIYTAVVEGYTKAHKADDA 228
L+PN + + GLCK G +++A KLF L+ IP+ YT ++ G A + A
Sbjct: 715 LVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKA 774
Query: 229 KRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEG 288
+ +M GI PN +Y L++GLCK + A ++ + G +PN T+ L++G
Sbjct: 775 FTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDG 834
Query: 289 FCKEQGIEEAKGAIKTLIEKGFA 311
K + EA + +IEKG
Sbjct: 835 LVKSGNVAEAMRLKEKMIEKGLV 857
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 74/143 (51%), Gaps = 3/143 (2%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A++IF +M + L P+ ++DG C+ G V EALKL M +K +P ++ Y ++
Sbjct: 384 EAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILL 443
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+GY++ D +++ M G++ + S + L++ L K +A + +L G
Sbjct: 444 KGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLL 503
Query: 277 PNVTTFVDLVEGFCKEQGIEEAK 299
+ T ++ G CK + + EAK
Sbjct: 504 TDTITLNVMISGLCKMEKVNEAK 526
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 74/145 (51%), Gaps = 5/145 (3%)
Query: 160 DADEIFKKMKET--GLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 214
D +F K E+ GL N V ++++G G V+ ++ LM E+G +V YT+
Sbjct: 242 DKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTS 301
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
+++GY K ++A+ +F ++ + + Y VL+ G C+ +++DA M+E G
Sbjct: 302 LIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIG 361
Query: 275 HSPNVTTFVDLVEGFCKEQGIEEAK 299
N T L+ G+CK + EA+
Sbjct: 362 VRTNTTICNSLINGYCKSGQLVEAE 386
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 4/120 (3%)
Query: 159 EDADEIFKKMKETG-LIPN---AVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 214
EDA ++F + + IP+ ++ G G + +A L M KG IP IV Y A
Sbjct: 736 EDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNA 795
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
+++G K D A+R+ K+ GI+PNA +Y L+ GL K + +A +M+E G
Sbjct: 796 LIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKG 855
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Query: 202 EKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKM-QSNGISPNAFSYTVLVQGLCKCSRL 260
+K +P ++Y + G KA K +DA+++F + S+ P+ ++YT+L+ G +
Sbjct: 712 KKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDI 771
Query: 261 QDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
AF EM G PN+ T+ L++G CK ++ A+ + L +KG N
Sbjct: 772 NKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPN 824
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 3/157 (1%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A ++++ + GL+ + + M+ GLCK V EA ++ + P + Y A+
Sbjct: 489 EAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALS 548
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
GY K +A + M+ GI P Y L+ G K L + +E+ G +
Sbjct: 549 HGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLT 608
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
P V T+ L+ G+C I++A +IEKG +N
Sbjct: 609 PTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLN 645
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 70/154 (45%), Gaps = 3/154 (1%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA + M E G+ N ++++G CK G + EA ++F M + P+ Y +V
Sbjct: 349 DAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLV 408
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+GY +A D+A ++ +M + P +Y +L++G + D ML+ G +
Sbjct: 409 DGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVN 468
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
+ + L+E K EA + ++ +G
Sbjct: 469 ADEISCSTLLEALFKLGDFNEAMKLWENVLARGL 502
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 68/144 (47%), Gaps = 1/144 (0%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
A+ G K G ++EA + M KG P I +Y ++ G K + + ++++
Sbjct: 546 ALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRAR 605
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
G++P +Y L+ G C + A+ C EM+E G + NV + + I+EA
Sbjct: 606 GLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEA 665
Query: 299 KGAIKTLIEKGFAV-NEKAVKDFL 321
++ +++ + +++K+FL
Sbjct: 666 CLLLQKIVDFDLLLPGYQSLKEFL 689
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 74/177 (41%), Gaps = 20/177 (11%)
Query: 158 PEDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQE-------------------ALKLFG 198
P D I K E GL+ NA+ + D + G + AL ++
Sbjct: 155 PTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYD 214
Query: 199 LMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN-GISPNAFSYTVLVQGLCKC 257
M P++ + VV Y ++ D A ++ +S+ G+ N +Y L+ G
Sbjct: 215 QMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMI 274
Query: 258 SRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNE 314
++ M E G S NV T+ L++G+CK+ +EEA+ + L EK ++
Sbjct: 275 GDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQ 331
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 68/146 (46%), Gaps = 5/146 (3%)
Query: 180 MLDGLCKDGLVQEALKLFGLMREK--GTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQS 237
+++ C+ G V +A+ +F E G +V Y +++ GY + R+ R M
Sbjct: 231 VVNAYCRSGNVDKAM-VFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSE 289
Query: 238 NGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEML-EAGHSPNVTTFVDLVEGFCKEQGIE 296
G+S N +YT L++G CK +++A E E+L E + + L++G+C+ I
Sbjct: 290 RGVSRNVVTYTSLIKGYCKKGLMEEA-EHVFELLKEKKLVADQHMYGVLMDGYCRTGQIR 348
Query: 297 EAKGAIKTLIEKGFAVNEKAVKDFLN 322
+A +IE G N +N
Sbjct: 349 DAVRVHDNMIEIGVRTNTTICNSLIN 374
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 6/110 (5%)
Query: 137 SSETNQSEEATKSSNSNQPAMPEDADEIFK---KMKETGLIPNAV---AMLDGLCKDGLV 190
SS+ +E T + + A+ D ++ F +M G+IPN V A++ GLCK G V
Sbjct: 747 SSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNV 806
Query: 191 QEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGI 240
A +L + +KG P + Y +++G K+ +A R+ KM G+
Sbjct: 807 DRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGL 856
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 9/162 (5%)
Query: 158 PEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREK---GTIPEIVI 211
P A + M+E G+ P + ++DGL + G + EA K F M E G P++V
Sbjct: 308 PLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKL-EACKYF--MDETVKVGCTPDVVC 364
Query: 212 YTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEML 271
YT ++ GY + + A+ +F++M G PN F+Y +++G C + ++A EM
Sbjct: 365 YTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEME 424
Query: 272 EAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
G +PN + LV + EA +K ++EKG V+
Sbjct: 425 SRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVH 466
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 65/137 (47%), Gaps = 4/137 (2%)
Query: 193 ALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQ 252
AL L MRE G P ++ +T +++G ++A K + K + G +P+ YTV++
Sbjct: 311 ALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMIT 370
Query: 253 GLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG--- 309
G L+ A E EM E G PNV T+ ++ GFC +EA +K + +G
Sbjct: 371 GYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNP 430
Query: 310 -FAVNEKAVKDFLNKKK 325
F V V + N K
Sbjct: 431 NFVVYSTLVNNLKNAGK 447
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 68/152 (44%), Gaps = 5/152 (3%)
Query: 162 DEIFKKMKETGLIPNA----VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
D ++++M E G P+ + M + G +L M + G P++ Y ++
Sbjct: 242 DWVYEQMLEDGFTPDVLTYNIVMFANF-RLGKTDRLYRLLDEMVKDGFSPDLYTYNILLH 300
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
+K A + M+ G+ P +T L+ GL + +L+ F E ++ G +P
Sbjct: 301 HLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTP 360
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
+V + ++ G+ +E+A+ K + EKG
Sbjct: 361 DVVCYTVMITGYISGGELEKAEEMFKEMTEKG 392
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 88/166 (53%), Gaps = 3/166 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+DA ++ ++K +G P+ ++ G CK + +A++++G M+ G +P+ ++Y +
Sbjct: 306 KDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCL 365
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++G KA K +A ++F KM G+ + ++Y +L+ GL + R + F ++ + G
Sbjct: 366 LDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQ 425
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFL 321
+ TF + C+E +E A ++ + +GF+V+ + L
Sbjct: 426 FVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLL 471
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 59/103 (57%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
++ GL K G A + + ++G +IV+Y ++ KA + D+A ++F M+SN
Sbjct: 670 VIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSN 729
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTT 281
GI+P+ SY +++ K +L++A+++ ML+AG PN T
Sbjct: 730 GINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVT 772
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 72/138 (52%), Gaps = 9/138 (6%)
Query: 161 ADEIFKKMKETGLI------PNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVI 211
A +FK+MKE + P+ +++ LC G ++AL ++ ++ G P+
Sbjct: 267 ALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNST 326
Query: 212 YTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEML 271
Y +++G K+++ DDA RI+ +MQ NG P+ Y L+ G K ++ +A + +M+
Sbjct: 327 YRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMV 386
Query: 272 EAGHSPNVTTFVDLVEGF 289
+ G + T+ L++G
Sbjct: 387 QEGVRASCWTYNILIDGL 404
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 77/154 (50%), Gaps = 4/154 (2%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+DA I+ +M+ G +P+ + +LDG K V EA +LF M ++G Y +
Sbjct: 341 DDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNIL 400
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++G + +A+ +F ++ G +A +++++ LC+ +L+ A + EM G
Sbjct: 401 IDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGF 460
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
S ++ T L+ GF K QG + K + I +G
Sbjct: 461 SVDLVTISSLLIGFHK-QGRWDWKEKLMKHIREG 493
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 3/165 (1%)
Query: 163 EIFKKMKETGLIPNAV-AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTK 221
EIF M T L +M+ K G Q A + M E +I Y +++G K
Sbjct: 618 EIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGK 677
Query: 222 AHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTT 281
+AD A + ++ G + Y L+ L K +RL +A + M G +P+V +
Sbjct: 678 MGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVS 737
Query: 282 FVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNE--KAVKDFLNKK 324
+ ++E K ++EA +K +++ G N + D+L K+
Sbjct: 738 YNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVTDTILDYLGKE 782
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 3/149 (2%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A IFK +K+ G P+ V M+ G C+ G + A KL+ M +KG P Y ++
Sbjct: 301 EAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMI 360
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G+ K + + + +M NG S +++G C + +AFE M E G +
Sbjct: 361 HGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVT 420
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTL 305
PN T+ L++GFCKE +E+ K L
Sbjct: 421 PNAITYNALIKGFCKENKVEKGLKLYKEL 449
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 47/83 (56%)
Query: 172 GLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRI 231
G + + M+ G C G EA ++F M E G P + Y A+++G+ K +K + ++
Sbjct: 386 GTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKL 445
Query: 232 FRKMQSNGISPNAFSYTVLVQGL 254
++++++ G+ P+ +Y LV+ L
Sbjct: 446 YKELKALGLKPSGMAYAALVRNL 468
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 66/152 (43%), Gaps = 3/152 (1%)
Query: 163 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 219
E+ K+ + GL P ++ G C+ G ++ M P + IY +++G
Sbjct: 234 ELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGL 293
Query: 220 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNV 279
K +A IF+ ++ G +P+ YT +++G C+ L A + EM++ G PN
Sbjct: 294 CMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNE 353
Query: 280 TTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
+ ++ G K I + ++ G+
Sbjct: 354 FAYNVMIHGHFKRGEISLVEAFYNEMLRNGYG 385
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 71/155 (45%), Gaps = 1/155 (0%)
Query: 163 EIFKKMKETGLIPNAV-AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTK 221
E+ K+M E+ + ++ LC G V E +L ++G P +Y ++ G+ +
Sbjct: 201 ELHKEMVESEFDSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCE 260
Query: 222 AHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTT 281
+ M + P+ + Y +++GLC + +A+ + + G++P+
Sbjct: 261 IGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVV 320
Query: 282 FVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKA 316
+ ++ GFC++ + A+ +I+KG NE A
Sbjct: 321 YTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFA 355
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 68/161 (42%), Gaps = 33/161 (20%)
Query: 184 LCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKAD--------------DAK 229
L ++GLV+EA++++ ++++ G +V +V+ G KA K D D++
Sbjct: 155 LSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSE 214
Query: 230 RI-------------------FRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 270
RI ++ G+ P + Y L+ G C+ E M
Sbjct: 215 RIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTM 274
Query: 271 LEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
+ H P++ + +++G C + EA K L +KG+A
Sbjct: 275 IAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYA 315
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A EIFK M ETG+ PNA+ A++ G CK+ V++ LKL+ ++ G P + Y A+
Sbjct: 405 DEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAAL 464
Query: 216 V 216
V
Sbjct: 465 V 465
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 3/142 (2%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A ++F E G+ + V AM+ G C+ G++ EAL M E+ +P+ Y+ +
Sbjct: 502 DEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTI 561
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++GY K A +IFR M+ N PN +YT L+ G C + A E EM
Sbjct: 562 IDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDL 621
Query: 276 SPNVTTFVDLVEGFCKEQGIEE 297
PNV T+ L+ KE E
Sbjct: 622 VPNVVTYTTLIRSLAKESSTLE 643
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 72/145 (49%), Gaps = 3/145 (2%)
Query: 172 GLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDA 228
GLIPN ++ ++ CK A KL M E+G P+IV Y ++ G + DDA
Sbjct: 375 GLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDA 434
Query: 229 KRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEG 288
+ K+ G+SP+A Y +L+ GLCK R A EML+ P+ + L++G
Sbjct: 435 VNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDG 494
Query: 289 FCKEQGIEEAKGAIKTLIEKGFAVN 313
F + +EA+ +EKG V+
Sbjct: 495 FIRSGDFDEARKVFSLSVEKGVKVD 519
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 75/148 (50%), Gaps = 3/148 (2%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A +F +M + ++P+A ++DG + G EA K+F L EKG ++V + A+++
Sbjct: 469 AKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIK 528
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G+ ++ D+A +M + P+ F+Y+ ++ G K + A + M + P
Sbjct: 529 GFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKP 588
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTL 305
NV T+ L+ GFC + + A+ K +
Sbjct: 589 NVVTYTSLINGFCCQGDFKMAEETFKEM 616
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 73/143 (51%), Gaps = 3/143 (2%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+DA + K+ + G+ P+A ++ GLCK G A LF M ++ +P+ +Y +
Sbjct: 432 DDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATL 491
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++G+ ++ D+A+++F G+ + + +++G C+ L +A M E
Sbjct: 492 IDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHL 551
Query: 276 SPNVTTFVDLVEGFCKEQGIEEA 298
P+ T+ +++G+ K+Q + A
Sbjct: 552 VPDKFTYSTIIDGYVKQQDMATA 574
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 65/129 (50%)
Query: 180 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 239
+++ LCK+G + A+ +KG IP + Y +++ Y K+ + D A ++ +M G
Sbjct: 351 LINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERG 410
Query: 240 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAK 299
P+ +Y +L+ GL + DA V++++ G SP+ + L+ G CK AK
Sbjct: 411 CKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAK 470
Query: 300 GAIKTLIEK 308
++++
Sbjct: 471 LLFSEMLDR 479
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 72/148 (48%), Gaps = 18/148 (12%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDG-LVQEALKLFGLMREKGTIPEIVIYTAVV 216
A+E FK+M+ L+PN V ++ L K+ +++A+ + LM +P V + ++
Sbjct: 609 AEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLL 668
Query: 217 EGYTKAH--------------KADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQD 262
+G+ K ++ F +M+S+G S +A +Y + LC ++
Sbjct: 669 QGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKT 728
Query: 263 AFEFCVEMLEAGHSPNVTTFVDLVEGFC 290
A F +M++ G SP+ +F ++ GFC
Sbjct: 729 ACMFQDKMVKKGFSPDPVSFAAILHGFC 756
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 68/132 (51%), Gaps = 1/132 (0%)
Query: 180 MLDGLCKDGLVQEALKLFGLMRE-KGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
+L + G + +A++++ + E ++P+++ +++ K+ + DA++++ +M
Sbjct: 140 VLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDR 199
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
G S + +S +LV+G+C +++ + G PN+ + ++ G+CK IE A
Sbjct: 200 GDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENA 259
Query: 299 KGAIKTLIEKGF 310
K L KGF
Sbjct: 260 YLVFKELKLKGF 271
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 75/191 (39%), Gaps = 38/191 (19%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKG----------- 204
E+A +FK++K G +P M++G CK+G + +L ++E+G
Sbjct: 257 ENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNI 316
Query: 205 ------------------------TIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGI 240
P++ Y ++ K K + A + G+
Sbjct: 317 IDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGL 376
Query: 241 SPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKG 300
PN SY L+Q CK A + ++M E G P++ T+ L+ G +++A
Sbjct: 377 IPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVN 436
Query: 301 AIKTLIEKGFA 311
LI++G +
Sbjct: 437 MKVKLIDRGVS 447
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 70/154 (45%), Gaps = 3/154 (1%)
Query: 174 IPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKR 230
+P+ +A +L L K + +A K++ M ++G + +V+G K + ++
Sbjct: 167 VPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRK 226
Query: 231 IFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFC 290
+ G PN Y ++ G CK +++A+ E+ G P + TF ++ GFC
Sbjct: 227 LIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFC 286
Query: 291 KEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLNKK 324
KE + + + E+G V+ + + ++ K
Sbjct: 287 KEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAK 320
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 77/152 (50%), Gaps = 3/152 (1%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A I M GL P+ + ++DG C+ G V+ AL++ M + G + V ++A+V
Sbjct: 399 ARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVC 458
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G K + DA+R R+M GI P+ +YT+++ CK Q F+ EM GH P
Sbjct: 459 GMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVP 518
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
+V T+ L+ G CK ++ A + ++ G
Sbjct: 519 SVVTYNVLLNGLCKLGQMKNADMLLDAMLNIG 550
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 71/135 (52%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
A+++ LCK+ + A LF M ++G IP VI+T ++ G+++ + D K ++KM S
Sbjct: 315 ALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSK 374
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
G+ P+ Y LV G CK L A M+ G P+ T+ L++GFC+ +E A
Sbjct: 375 GLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETA 434
Query: 299 KGAIKTLIEKGFAVN 313
K + + G ++
Sbjct: 435 LEIRKEMDQNGIELD 449
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 77/154 (50%), Gaps = 3/154 (1%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA ++F ++ + L P V+ +++G CK G + E +L M + T P++ Y+A++
Sbjct: 258 DAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALI 317
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
K +K D A +F +M G+ PN +T L+ G + + E +ML G
Sbjct: 318 NALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQ 377
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
P++ + LV GFCK + A+ + +I +G
Sbjct: 378 PDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGL 411
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 73/133 (54%), Gaps = 3/133 (2%)
Query: 163 EIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 219
E ++KM GL P+ V +++G CK+G + A + M +G P+ + YT +++G+
Sbjct: 366 ESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGF 425
Query: 220 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNV 279
+ + A I ++M NGI + ++ LV G+CK R+ DA EML AG P+
Sbjct: 426 CRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDD 485
Query: 280 TTFVDLVEGFCKE 292
T+ +++ FCK+
Sbjct: 486 VTYTMMMDAFCKK 498
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 77/153 (50%), Gaps = 3/153 (1%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A +F +M + GLIPN V ++ G ++G + + + M KG P+IV+Y +V
Sbjct: 329 AHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVN 388
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G+ K A+ I M G+ P+ +YT L+ G C+ ++ A E EM + G
Sbjct: 389 GFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIEL 448
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
+ F LV G CKE + +A+ A++ ++ G
Sbjct: 449 DRVGFSALVCGMCKEGRVIDAERALREMLRAGI 481
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 74/133 (55%), Gaps = 3/133 (2%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A EI K+M + G+ + V A++ G+CK+G V +A + M G P+ V YT +
Sbjct: 432 ETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMM 491
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++ + K A ++ ++MQS+G P+ +Y VL+ GLCK ++++A ML G
Sbjct: 492 MDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGV 551
Query: 276 SPNVTTFVDLVEG 288
P+ T+ L+EG
Sbjct: 552 VPDDITYNTLLEG 564
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 68/131 (51%)
Query: 180 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 239
+++ CK+G + +A K+F + ++ P +V + ++ GY K D+ R+ +M+ +
Sbjct: 246 LMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSR 305
Query: 240 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAK 299
P+ F+Y+ L+ LCK +++ A EM + G PN F L+ G + I+ K
Sbjct: 306 TRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMK 365
Query: 300 GAIKTLIEKGF 310
+ + ++ KG
Sbjct: 366 ESYQKMLSKGL 376
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 51/106 (48%)
Query: 209 IVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCV 268
+ ++ ++ + K DA+++F ++ + P S+ L+ G CK L + F
Sbjct: 240 VYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKH 299
Query: 269 EMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNE 314
+M ++ P+V T+ L+ CKE ++ A G + ++G N+
Sbjct: 300 QMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPND 345
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 83/161 (51%), Gaps = 6/161 (3%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREK-GTIPEIVIYTA 214
+++ ++F+ MK+ G+ P+ + ++L L K G A LF MR G P+ +
Sbjct: 155 QESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNT 214
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
++ G+ K D+A RIF+ M+ +P+ +Y ++ GLC+ +++ A ML+
Sbjct: 215 LINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKA 274
Query: 275 H--SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
PNV ++ LV G+C +Q I+EA ++ +G N
Sbjct: 275 TDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPN 315
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 76/148 (51%), Gaps = 6/148 (4%)
Query: 161 ADEIFKKMKET-GLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
A ++F +M+ T G+ P++ +++G CK+ +V EA ++F M P++V Y ++
Sbjct: 192 AHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTII 251
Query: 217 EGYTKAHKADDAKRIFRKM--QSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
+G +A K A + M ++ + PN SYT LV+G C + +A +ML G
Sbjct: 252 DGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRG 311
Query: 275 HSPNVTTFVDLVEGFCKEQGIEEAKGAI 302
PN T+ L++G + +E K +
Sbjct: 312 LKPNAVTYNTLIKGLSEAHRYDEIKDIL 339
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 80/158 (50%), Gaps = 7/158 (4%)
Query: 156 AMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGT--IPEIV 210
+M ++A IFK M+ P+ V ++DGLC+ G V+ A + M +K T P +V
Sbjct: 223 SMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVV 282
Query: 211 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 270
YT +V GY + D+A +F M S G+ PNA +Y L++GL + R + + +
Sbjct: 283 SYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGG 342
Query: 271 LEA--GHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLI 306
+A +P+ TF L++ C ++ A + ++
Sbjct: 343 NDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEML 380
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 73/131 (55%), Gaps = 1/131 (0%)
Query: 188 GLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQ-SNGISPNAFS 246
GL QE++KLF M++ G P ++ + +++ K + A +F +M+ + G++P++++
Sbjct: 152 GLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYT 211
Query: 247 YTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLI 306
+ L+ G CK S + +AF +M +P+V T+ +++G C+ ++ A + ++
Sbjct: 212 FNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGML 271
Query: 307 EKGFAVNEKAV 317
+K V+ V
Sbjct: 272 KKATDVHPNVV 282
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/185 (20%), Positives = 84/185 (45%), Gaps = 2/185 (1%)
Query: 161 ADEIFKKMKETGLI--PNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEG 218
A+++F+++ + G+ P+ ++ G C++G + A +L LM + +P++ Y +++G
Sbjct: 449 AEKVFRQLMKRGVQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDG 508
Query: 219 YTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPN 278
K +A A ++M + P A ++ ++ L K ++F MLE N
Sbjct: 509 LLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQN 568
Query: 279 VTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLNKKKPFSPSVWEAIFGK 338
+ +V E+A ++ L + G+ V + + +L + + + +F
Sbjct: 569 IDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKMEELLGYLCENRKLLDAHTLVLFCL 628
Query: 339 KAPQM 343
+ QM
Sbjct: 629 EKSQM 633
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 3/167 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+ A F +M G+ P+ V ++D CK G A ++F M +G +P Y +
Sbjct: 461 DHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIM 520
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ Y + DD KR+ KM+S GI PN ++T LV K R DA E EM G
Sbjct: 521 INSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGL 580
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
P+ T + L+ + + E+A A + + G + A+ +N
Sbjct: 581 KPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLIN 627
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 73/161 (45%), Gaps = 3/161 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+D + KMK G++PN V ++D K G +A++ M+ G P +Y A+
Sbjct: 531 DDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNAL 590
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ Y + ++ A FR M S+G+ P+ + L+ + R +AF M E G
Sbjct: 591 INAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGV 650
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKA 316
P+V T+ L++ + ++ + +I G + KA
Sbjct: 651 KPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKA 691
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 3/135 (2%)
Query: 158 PEDADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 214
P A ++ + TGL V+++ L G EA LF +R+ G P Y A
Sbjct: 285 PSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNA 344
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
+++GY K DA+ + +M+ G+SP+ +Y++L+ R + A EM
Sbjct: 345 LLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGD 404
Query: 275 HSPNVTTFVDLVEGF 289
PN F L+ GF
Sbjct: 405 VQPNSFVFSRLLAGF 419
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 62/126 (49%)
Query: 180 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 239
++ G K G +AL+L G+ + G + +++ + + +A+ +F +++ +G
Sbjct: 275 IIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSG 334
Query: 240 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAK 299
I P +Y L++G K L+DA EM + G SP+ T+ L++ + E A+
Sbjct: 335 IKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESAR 394
Query: 300 GAIKTL 305
+K +
Sbjct: 395 IVLKEM 400
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 76/179 (42%), Gaps = 6/179 (3%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A + K+M+ + PN+ +L G G Q+ ++ M+ G P+ Y V
Sbjct: 391 ESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVV 450
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++ + K + D A F +M S GI P+ ++ L+ CK R A E M G
Sbjct: 451 IDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGC 510
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF---AVNEKAVKDFLNKKKPFSPSV 331
P TT+ ++ + ++ ++ K + + +G V + D K F+ ++
Sbjct: 511 LPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAI 569
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 78/146 (53%), Gaps = 6/146 (4%)
Query: 180 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 239
++D +C ++EA+ L + G P+ +Y +++G+ K +A +++KM+ G
Sbjct: 236 LIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEG 295
Query: 240 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAK 299
+ P+ +Y L+ GL K R+++A + M++AG+ P+ T+ L+ G C++ E+
Sbjct: 296 VEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG---ESL 352
Query: 300 GAIKTLIE---KGFAVNEKAVKDFLN 322
GA+ L E +G A N+ L+
Sbjct: 353 GALSLLEEMEARGCAPNDCTYNTLLH 378
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 82/179 (45%), Gaps = 9/179 (5%)
Query: 122 FLDKFKLGFDNKAGNSSETNQSEEATKSSNSNQPAMPEDADEIFKKMKETGLIPNAV--- 178
F+D+ + FD K S T + S N + A + K+ G P+
Sbjct: 216 FVDEMRDDFDVKPDLVSFTILIDNVCNSKNLRE------AMYLVSKLGNAGFKPDCFLYN 269
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
++ G C EA+ ++ M+E+G P+ + Y ++ G +KA + ++A+ + M
Sbjct: 270 TIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDA 329
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEE 297
G P+ +YT L+ G+C+ A EM G +PN T+ L+ G CK + +++
Sbjct: 330 GYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDK 388
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 9/163 (5%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A ++KKMKE G+ P+ + ++ GL K G V+EA M + G P+ YT+++
Sbjct: 283 EAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLM 342
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G + ++ A + +M++ G +PN +Y L+ GLCK + E M +G
Sbjct: 343 NGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVK 402
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKD 319
+ LV K + EA +AV+ K++ D
Sbjct: 403 LESNGYATLVRSLVKSGKVAEAYEVFD------YAVDSKSLSD 439
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 80/168 (47%), Gaps = 4/168 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTI-PEIVIYTA 214
++A ++ K++ E P+ +L LCK + + MR+ + P++V +T
Sbjct: 176 DEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTI 235
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
+++ + +A + K+ + G P+ F Y +++G C S+ +A +M E G
Sbjct: 236 LIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEG 295
Query: 275 HSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
P+ T+ L+ G K +EEA+ +KT+++ G+ + +N
Sbjct: 296 VEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMN 343
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 62/136 (45%), Gaps = 3/136 (2%)
Query: 178 VAMLDGLCK--DGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKM 235
+ +L C+ D + ++ LM G P+ V V + + D+AK + +++
Sbjct: 126 LILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKEL 185
Query: 236 QSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA-GHSPNVTTFVDLVEGFCKEQG 294
P+ ++Y L++ LCKC L +EF EM + P++ +F L++ C +
Sbjct: 186 TEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKN 245
Query: 295 IEEAKGAIKTLIEKGF 310
+ EA + L GF
Sbjct: 246 LREAMYLVSKLGNAGF 261
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 84/155 (54%), Gaps = 3/155 (1%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A ++K+M+ + N V A++DG CK G +Q A +++ M E P ++YT +
Sbjct: 215 EVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTI 274
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++G+ + +D+A + KM + G+ + +Y V++ GLC +L++A E +M ++
Sbjct: 275 IDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDL 334
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
P++ F ++ + K ++ A LIE+GF
Sbjct: 335 VPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGF 369
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 11/163 (6%)
Query: 162 DEIFKKMKETGLI-----PNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 213
DE+F M G++ PN V +D CK G +Q ALK F M+ P +V +T
Sbjct: 146 DEVFVYM---GVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFT 202
Query: 214 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 273
+++GY KA + A ++++M+ +S N +YT L+ G CK +Q A E M+E
Sbjct: 203 CLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVED 262
Query: 274 GHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKA 316
PN + +++GF + + A + ++ +G ++ A
Sbjct: 263 RVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITA 305
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 82/164 (50%), Gaps = 9/164 (5%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A ++ K+ E G P+ VA M+DG+ K+G + EA+ F + + V+YT +++
Sbjct: 357 AVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKAND-----VMYTVLID 411
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
K + +R+F K+ G+ P+ F YT + GLCK L DAF+ M++ G
Sbjct: 412 ALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLL 471
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFL 321
++ + L+ G + + EA+ ++ G + + AV D L
Sbjct: 472 DLLAYTTLIYGLASKGLMVEARQVFDEMLNSGIS-PDSAVFDLL 514
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 71/137 (51%), Gaps = 3/137 (2%)
Query: 165 FKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTK 221
F MK L PN V ++DG CK G ++ A+ L+ MR +V YTA+++G+ K
Sbjct: 186 FHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCK 245
Query: 222 AHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTT 281
+ A+ ++ +M + + PN+ YT ++ G + +A +F +ML G ++T
Sbjct: 246 KGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITA 305
Query: 282 FVDLVEGFCKEQGIEEA 298
+ ++ G C ++EA
Sbjct: 306 YGVIISGLCGNGKLKEA 322
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 7/151 (4%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEA-LKLFGLMREKGTI--PEIVIYTA 214
A++I M G P+ ++ ++DG C++G ++ A L L L G I P+IV + +
Sbjct: 75 AEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNS 134
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
+ G++K D+ ++ + SPN +Y+ + CK LQ A + M
Sbjct: 135 LFNGFSKMKMLDEV-FVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDA 193
Query: 275 HSPNVTTFVDLVEGFCKEQGIEEAKGAIKTL 305
SPNV TF L++G+CK +E A K +
Sbjct: 194 LSPNVVTFTCLIDGYCKAGDLEVAVSLYKEM 224
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 65/133 (48%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
++D LCK+G E +LF + E G +P+ +YT+ + G K DA ++ +M
Sbjct: 408 VLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQE 467
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
G+ + +YT L+ GL + +A + EML +G SP+ F L+ + KE + A
Sbjct: 468 GLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAA 527
Query: 299 KGAIKTLIEKGFA 311
+ + +G
Sbjct: 528 SDLLLDMQRRGLV 540
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 75/157 (47%), Gaps = 10/157 (6%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A + KM G+ + A ++ GLC +G ++EA ++ M + +P++VI+T +
Sbjct: 285 DNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTM 344
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAF-EFCVEMLEAG 274
+ Y K+ + A ++ K+ G P+ + + ++ G+ K +L +A FC+E
Sbjct: 345 MNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIE----- 399
Query: 275 HSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
N + L++ CKE E + + E G
Sbjct: 400 -KANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLV 435
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
Query: 160 DADEIFKKMKETGLIPN---AVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+ + +F K+ E GL+P+ + + GLCK G + +A KL M ++G + +++ YT ++
Sbjct: 421 EVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLI 480
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQG 253
G +A+++F +M ++GISP++ + +L++
Sbjct: 481 YGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRA 517
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 81/151 (53%), Gaps = 5/151 (3%)
Query: 162 DEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEG 218
D + M+ G IP+ A LD LC++ V A++ F M ++G P++V YT ++ G
Sbjct: 99 DALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILING 158
Query: 219 YTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPN 278
+A K DA I+ M +G+SP+ + LV GLC ++ A+E E +++
Sbjct: 159 LFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKL 218
Query: 279 VTTFVD-LVEGFCKEQGIEEAKGAIKTLIEK 308
T + L+ GFCK IE+A+ A+K+ + K
Sbjct: 219 STVVYNALISGFCKAGRIEKAE-ALKSYMSK 248
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 94/189 (49%), Gaps = 10/189 (5%)
Query: 138 SETNQSEEATKSSNSNQPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEAL 194
S + E ++SN+ + A +F++M++ G++ N V +++ ++G A
Sbjct: 327 SYSTLIETFCRASNTRK------AYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAK 380
Query: 195 KLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGL 254
KL M E G P+ + YT +++ K+ D A +F M + I+P+A SY L+ GL
Sbjct: 381 KLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGL 440
Query: 255 CKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNE 314
C+ R+ +A + +M P+ TF ++ G + + + A +++KGF + +
Sbjct: 441 CRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTL-D 499
Query: 315 KAVKDFLNK 323
+ V D L K
Sbjct: 500 RDVSDTLIK 508
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 75/147 (51%), Gaps = 2/147 (1%)
Query: 167 KMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKAD 226
++K + ++ NA ++ G CK G +++A L M + G P++V Y ++ Y +
Sbjct: 215 RVKLSTVVYNA--LISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLK 272
Query: 227 DAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLV 286
A+ + +M +GI +A+SY L++ C+ S + F V+ +E +V ++ L+
Sbjct: 273 RAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLI 332
Query: 287 EGFCKEQGIEEAKGAIKTLIEKGFAVN 313
E FC+ +A + + +KG +N
Sbjct: 333 ETFCRASNTRKAYRLFEEMRQKGMVMN 359
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 68/133 (51%), Gaps = 3/133 (2%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A ++ +M E GL P+ + +LD LCK G V +A +F M E P+ + Y +++
Sbjct: 379 AKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLIS 438
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G ++ + +A ++F M+ P+ ++ ++ GL + +L A++ +M++ G +
Sbjct: 439 GLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTL 498
Query: 278 NVTTFVDLVEGFC 290
+ L++ C
Sbjct: 499 DRDVSDTLIKASC 511
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
Query: 193 ALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQ 252
AL M+E G P ++ YT +++GY + + D AK +FR+M G PN F+Y +++
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 767
Query: 253 GLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQG-IEEAKGAIKTLIEKGFA 311
GLC ++A EM G +PN + LV G+ ++ G + EA+ IK +++KG
Sbjct: 768 GLCMAGEFREACWLLKEMESRGCNPNFVVYSTLV-GYLRKAGKLSEARKVIKEMVKKGHY 826
Query: 312 VN 313
V+
Sbjct: 827 VH 828
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 80/156 (51%), Gaps = 3/156 (1%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A + + M +G+IP+A A +++ LCK G V A++L M + G V Y A+V
Sbjct: 125 AIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVR 184
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G + + + ++ G++PNAF+Y+ L++ K +A + E++ G P
Sbjct: 185 GLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEP 244
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
N+ ++ L+ GFCKE ++A + L KGF N
Sbjct: 245 NLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKAN 280
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 71/136 (52%)
Query: 174 IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFR 233
+ ++ +L LCK +++A+++ LM G IP+ YT +V K A ++
Sbjct: 106 VAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVE 165
Query: 234 KMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQ 293
KM+ +G N +Y LV+GLC L + +F +++ G +PN T+ L+E KE+
Sbjct: 166 KMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKER 225
Query: 294 GIEEAKGAIKTLIEKG 309
G +EA + +I KG
Sbjct: 226 GTDEAVKLLDEIIVKG 241
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 3/146 (2%)
Query: 163 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 219
+ +++ + GL PNA +L+ K+ EA+KL + KG P +V Y ++ G+
Sbjct: 197 QFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGF 256
Query: 220 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNV 279
K + DDA +FR++ + G N SY +L++ LC R ++A EM +P+V
Sbjct: 257 CKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSV 316
Query: 280 TTFVDLVEGFCKEQGIEEAKGAIKTL 305
T+ L+ E+A +K +
Sbjct: 317 VTYNILINSLAFHGRTEQALQVLKEM 342
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 70/145 (48%), Gaps = 3/145 (2%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A ++ +KM++ G N V A++ GLC G + ++L+ + +KG P Y+ ++E
Sbjct: 160 AMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLE 219
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
K D+A ++ ++ G PN SY VL+ G CK R DA E+ G
Sbjct: 220 AAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKA 279
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAI 302
NV ++ L+ C + EEA +
Sbjct: 280 NVVSYNILLRCLCCDGRWEEANSLL 304
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%)
Query: 204 GTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDA 263
G P + T ++ KA++ A R+ M S+GI P+A +YT LV LCK + A
Sbjct: 101 GHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYA 160
Query: 264 FEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
+ +M + G+ N T+ LV G C + ++ ++ L++KG A N
Sbjct: 161 MQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPN 210
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 56/128 (43%), Gaps = 1/128 (0%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQ-S 237
+++ LC+ G A +L M G P+ Y+A++ G A + M+ S
Sbjct: 428 SVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEES 487
Query: 238 NGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEE 297
P ++ ++ GLCK R A E M+E PN TT+ LVEG E +E
Sbjct: 488 ENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELEL 547
Query: 298 AKGAIKTL 305
AK + L
Sbjct: 548 AKEVLDEL 555
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 69/155 (44%), Gaps = 3/155 (1%)
Query: 162 DEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTK 221
DEI K E L+ V +L G CK+G +A+ LF + KG +V Y ++
Sbjct: 235 DEIIVKGGEPNLVSYNV-LLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCC 293
Query: 222 AHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNV-- 279
+ ++A + +M +P+ +Y +L+ L R + A + EM + H V
Sbjct: 294 DGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTA 353
Query: 280 TTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNE 314
T++ ++ CKE ++ + +I + NE
Sbjct: 354 TSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNE 388
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 8/133 (6%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+ A ++ +M G P+AV+ ++ +C+ GLV+E +L + P + +Y A+
Sbjct: 198 DGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL-----AERFEPVVSVYNAL 252
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ G K H A + R+M GISPN SY+ L+ LC +++ AF F +ML+ G
Sbjct: 253 INGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGC 312
Query: 276 SPNVTTFVDLVEG 288
PN+ T LV+G
Sbjct: 313 HPNIYTLSSLVKG 325
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 79/150 (52%), Gaps = 4/150 (2%)
Query: 160 DADEIFKKM-KETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
DA +++ +M + GL PN VA ++ G C G + +A+ +F M E G P I Y ++
Sbjct: 334 DALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSL 393
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ G+ K D A I+ KM ++G PN YT +V+ LC+ S+ ++A M +
Sbjct: 394 INGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENC 453
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTL 305
+P+V TF ++G C ++ A+ + +
Sbjct: 454 APSVPTFNAFIKGLCDAGRLDWAEKVFRQM 483
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 84/172 (48%), Gaps = 8/172 (4%)
Query: 154 QPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIV 210
Q + E A E+F ++KE G P+ +LD L + +Q ++ M+ G P +
Sbjct: 123 QVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVF 182
Query: 211 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 270
Y +++ K +K D AK++ +M + G P+A SYT ++ +C+ +++ E
Sbjct: 183 TYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRE----- 237
Query: 271 LEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
L P V+ + L+ G CKE + A ++ ++EKG + N + +N
Sbjct: 238 LAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLIN 289
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 4/151 (2%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFG-LMREKGTIPEIVIYTA 214
E A +M + G PN +++ G G +AL L+ ++R G P +V Y
Sbjct: 298 ELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNT 357
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
+V+G+ A +F M+ G SPN +Y L+ G K L A +ML +G
Sbjct: 358 LVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSG 417
Query: 275 HSPNVTTFVDLVEGFCKEQGIEEAKGAIKTL 305
PNV + ++VE C+ +EA+ I+ +
Sbjct: 418 CCPNVVVYTNMVEALCRHSKFKEAESLIEIM 448
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 1/145 (0%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
A+++GLCK+ + A +L M EKG P ++ Y+ ++ + + + A +M
Sbjct: 251 ALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKR 310
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA-GHSPNVTTFVDLVEGFCKEQGIEE 297
G PN ++ + LV+G DA + +M+ G PNV + LV+GFC I +
Sbjct: 311 GCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVK 370
Query: 298 AKGAIKTLIEKGFAVNEKAVKDFLN 322
A + E G + N + +N
Sbjct: 371 AVSVFSHMEEIGCSPNIRTYGSLIN 395
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 5/171 (2%)
Query: 140 TNQSEEATKSSNSNQPAMPEDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGL 199
TN E + S + E EI K +P A + GLC G + A K+F
Sbjct: 426 TNMVEALCRHSKFKEA---ESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQ 482
Query: 200 MREKGTIP-EIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCS 258
M ++ P IV Y +++G KA++ ++A + R++ G+ ++ +Y L+ G C
Sbjct: 483 MEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAG 542
Query: 259 RLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
A + +M+ G SP+ T ++ +CK QG E + L+ G
Sbjct: 543 LPGIALQLVGKMMVDGKSPDEITMNMIILAYCK-QGKAERAAQMLDLVSCG 592
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
+L G C GL AL+L G M G P+ + ++ Y K KA+ A ++ + S
Sbjct: 533 TLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML-DLVSC 591
Query: 239 G---ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGF 289
G P+ SYT ++ GLC+ + +D M+ AG P++ T+ L+ F
Sbjct: 592 GRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCF 645
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 4/168 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEAL-KLFGLMREKGTIPEIVIYTA 214
E + E+ +MK + P+ + +++ + GL E L LF MR +G P+IV Y
Sbjct: 193 ETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNT 252
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
++ D+A+ +FR M GI P+ +Y+ LV+ K RL+ + EM G
Sbjct: 253 LLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGG 312
Query: 275 HSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
P++T++ L+E + K I+EA G + G N LN
Sbjct: 313 SLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLN 360
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 80/156 (51%), Gaps = 3/156 (1%)
Query: 156 AMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIY 212
+ ++A+ +F+ M + G++P+ +++ K +++ L G M G++P+I Y
Sbjct: 261 GLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSY 320
Query: 213 TAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 272
++E Y K+ +A +F +MQ+ G +PNA +Y+VL+ + R D + +EM
Sbjct: 321 NVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKS 380
Query: 273 AGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
+ P+ T+ L+E F + +E ++E+
Sbjct: 381 SNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEE 416
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 82/163 (50%), Gaps = 3/163 (1%)
Query: 154 QPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIV 210
Q +D ++F +MK + P+A +++ + G +E + LF M E+ P++
Sbjct: 364 QSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDME 423
Query: 211 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 270
Y ++ K +DA++I + M +N I P++ +YT +++ + + ++A M
Sbjct: 424 TYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTM 483
Query: 271 LEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
E G +P++ TF L+ F + ++E++ + L++ G N
Sbjct: 484 HEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRN 526
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 3/129 (2%)
Query: 164 IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
+F +M+ G+ P+ V +L GL EA +F M + G +P++ Y+ +VE +
Sbjct: 234 LFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFG 293
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
K + + + +M S G P+ SY VL++ K +++A +M AG +PN
Sbjct: 294 KLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNAN 353
Query: 281 TFVDLVEGF 289
T+ L+ F
Sbjct: 354 TYSVLLNLF 362
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 73/142 (51%), Gaps = 4/142 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E ++ +M G +P+ + +L+ K G ++EA+ +F M+ G P Y+ +
Sbjct: 299 EKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVL 358
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ + ++ + DD +++F +M+S+ P+A +Y +L++ + ++ +M+E
Sbjct: 359 LNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENI 418
Query: 276 SPNVTTFVDLVEGFCKEQGIEE 297
P++ T+ ++ C + G+ E
Sbjct: 419 EPDMETYEGIIFA-CGKGGLHE 439
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 69/126 (54%), Gaps = 11/126 (8%)
Query: 194 LKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQG 253
++LF M ++G + V YT +++G +A D A+ IF++M S+G+ P+ +Y +L+ G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 254 LCKCSRLQDAFE----------FCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIK 303
LCK +L+ A FC L+ G PNV T+ ++ GFCK+ EEA +
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLK-GVKPNVVTYTTMISGFCKKGFKEEAYTLFR 119
Query: 304 TLIEKG 309
+ E G
Sbjct: 120 KMKEDG 125
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 60/104 (57%), Gaps = 12/104 (11%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEAL---------KLFGLMREKGTIPE 208
A EIFK+M G+ P+ + +LDGLCK+G +++AL LF + KG P
Sbjct: 35 AQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPN 94
Query: 209 IVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQ 252
+V YT ++ G+ K ++A +FRKM+ +G P++ +Y L++
Sbjct: 95 VVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIR 138
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 69/142 (48%), Gaps = 12/142 (8%)
Query: 163 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 219
E+F++M + GL+ N V ++ GL + G A ++F M G P+I+ Y +++G
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 220 TK---------AHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 270
K A K +D +F + G+ PN +YT ++ G CK ++A+ +M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 271 LEAGHSPNVTTFVDLVEGFCKE 292
E G P+ T+ L+ ++
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRD 143
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 66/118 (55%), Gaps = 3/118 (2%)
Query: 168 MKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHK 224
MK GL P+ V +++D CKD +++A KL MRE+ P+++ YT V+ G +
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 225 ADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTF 282
D A+ + ++M+ G P+ +Y ++ C RL DA + EM++ G SPN TT+
Sbjct: 297 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTY 354
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 77/155 (49%), Gaps = 3/155 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A ++ KM+E P+ + ++ GL G +A ++ M+E G P++ Y A
Sbjct: 263 EKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAA 322
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ + A + DA ++ +M G+SPNA +Y + + L + L ++E V ML
Sbjct: 323 IRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNEC 382
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
PN + + L++ F + + ++ A + ++ KGF
Sbjct: 383 LPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGF 417
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 60/122 (49%)
Query: 200 MREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSR 259
M+ KG P++V Y ++++ Y K + + A ++ KM+ +P+ +YT ++ GL +
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 260 LQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKD 319
A E EM E G P+V + + FC + + +A + +++KG + N
Sbjct: 297 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNL 356
Query: 320 FL 321
F
Sbjct: 357 FF 358
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 80/152 (52%), Gaps = 3/152 (1%)
Query: 162 DEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEG 218
+++ +M G PN V ++ + + EA+ +F M+E G P+ V Y +++
Sbjct: 384 NKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDI 443
Query: 219 YTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPN 278
+ KA D A ++++MQ+ G+SP+ F+Y+V++ L K L A + EM++ G +PN
Sbjct: 444 HAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPN 503
Query: 279 VTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
+ T+ +++ K + + A + + GF
Sbjct: 504 LVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 84/165 (50%), Gaps = 3/165 (1%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A +++++M+ GL P+ +++ L K G + A KLF M ++G P +V Y +++
Sbjct: 453 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD 512
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
+ KA +A +++R MQ+ G P+ +Y+++++ L C L++A EM + P
Sbjct: 513 LHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP 572
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
+ + LV+ + K +E+A + ++ G N L+
Sbjct: 573 DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLS 617
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A ++F +M + G PN V M+D K Q ALKL+ M+ G P+ V Y+ V+E
Sbjct: 488 AHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVME 547
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
++A+ +F +MQ P+ Y +LV K ++ A+++ ML AG P
Sbjct: 548 VLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRP 607
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
NV T L+ F + I EA ++ ++ G
Sbjct: 608 NVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL 640
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 74/148 (50%), Gaps = 14/148 (9%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A ++++ M+ G P+ V +++ L G ++EA +F M++K IP+ +Y +
Sbjct: 521 QNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLL 580
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
V+ + KA + A + ++ M G+ PN + L+ + +++ +A+E ML G
Sbjct: 581 VDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL 640
Query: 276 SPNVTTFVDLVE-----------GFCKE 292
P++ T+ L+ GFC +
Sbjct: 641 RPSLQTYTLLLSCCTDGRSKLDMGFCGQ 668
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 80/152 (52%), Gaps = 3/152 (1%)
Query: 162 DEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEG 218
+++ +M G PN V ++ + + EA+ +F M+E G P+ V Y +++
Sbjct: 384 NKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDI 443
Query: 219 YTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPN 278
+ KA D A ++++MQ+ G+SP+ F+Y+V++ L K L A + EM++ G +PN
Sbjct: 444 HAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPN 503
Query: 279 VTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
+ T+ +++ K + + A + + GF
Sbjct: 504 LVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 84/165 (50%), Gaps = 3/165 (1%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A +++++M+ GL P+ +++ L K G + A KLF M ++G P +V Y +++
Sbjct: 453 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD 512
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
+ KA +A +++R MQ+ G P+ +Y+++++ L C L++A EM + P
Sbjct: 513 LHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP 572
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
+ + LV+ + K +E+A + ++ G N L+
Sbjct: 573 DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLS 617
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A ++F +M + G PN V M+D K Q ALKL+ M+ G P+ V Y+ V+E
Sbjct: 488 AHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVME 547
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
++A+ +F +MQ P+ Y +LV K ++ A+++ ML AG P
Sbjct: 548 VLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRP 607
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
NV T L+ F + I EA ++ ++ G
Sbjct: 608 NVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL 640
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 74/148 (50%), Gaps = 14/148 (9%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A ++++ M+ G P+ V +++ L G ++EA +F M++K IP+ +Y +
Sbjct: 521 QNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLL 580
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
V+ + KA + A + ++ M G+ PN + L+ + +++ +A+E ML G
Sbjct: 581 VDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL 640
Query: 276 SPNVTTFVDLVE-----------GFCKE 292
P++ T+ L+ GFC +
Sbjct: 641 RPSLQTYTLLLSCCTDGRSKLDMGFCGQ 668
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 88/181 (48%), Gaps = 3/181 (1%)
Query: 131 DNKAGNSSETNQSEEATKSSNSNQPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKD 187
D K+G+ + + S + +A + M G+ P V ++DG K
Sbjct: 266 DVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKA 325
Query: 188 GLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSY 247
G + A ++ G M G P++V +T++++GY + + R++ +M + G+ PNAF+Y
Sbjct: 326 GEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTY 385
Query: 248 TVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIE 307
++L+ LC +RL A E ++ P + +++GFCK + EA ++ + +
Sbjct: 386 SILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEK 445
Query: 308 K 308
K
Sbjct: 446 K 446
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 68/113 (60%), Gaps = 1/113 (0%)
Query: 180 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 239
++ GLC G ++AL+L G+M G P+IV Y +++G+ K+++ + A +F+ ++S
Sbjct: 212 LIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGS 271
Query: 240 I-SPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCK 291
+ SP+ +YT ++ G CK ++++A +ML G P TF LV+G+ K
Sbjct: 272 VCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAK 324
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 72/138 (52%), Gaps = 3/138 (2%)
Query: 164 IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
++++M G+ PNA +++ LC + + +A +L G + K IP+ +Y V++G+
Sbjct: 369 LWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFC 428
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
KA K ++A I +M+ P+ ++T+L+ G C R+ +A +M+ G SP+
Sbjct: 429 KAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKI 488
Query: 281 TFVDLVEGFCKEQGIEEA 298
T L+ K +EA
Sbjct: 489 TVSSLLSCLLKAGMAKEA 506
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 3/165 (1%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A+EI KM G P+ V +++DG C+ G V + +L+ M +G P Y+ ++
Sbjct: 331 AEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILIN 390
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
++ A+ + ++ S I P F Y ++ G CK ++ +A EM + P
Sbjct: 391 ALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKP 450
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
+ TF L+ G C + + EA ++ G + ++ V L+
Sbjct: 451 DKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLS 495
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 3/133 (2%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
++L+ L K V++A+KLF + + + ++ G KA+ A + M
Sbjct: 176 SLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGF 235
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH--SPNVTTFVDLVEGFCKEQGIE 296
G P+ +Y L+QG CK + L A E + +++G SP+V T+ ++ G+CK +
Sbjct: 236 GCEPDIVTYNTLIQGFCKSNELNKASEM-FKDVKSGSVCSPDVVTYTSMISGYCKAGKMR 294
Query: 297 EAKGAIKTLIEKG 309
EA + ++ G
Sbjct: 295 EASSLLDDMLRLG 307
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 4/123 (3%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A E+ ++ +IP ++DG CK G V EA + M +K P+ + +T ++
Sbjct: 401 ARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILII 460
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G+ + +A IF KM + G SP+ + + L+ L K ++A+ ++ G S
Sbjct: 461 GHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL-NQIARKGQSN 519
Query: 278 NVT 280
NV
Sbjct: 520 NVV 522
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 88/181 (48%), Gaps = 3/181 (1%)
Query: 131 DNKAGNSSETNQSEEATKSSNSNQPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKD 187
D K+G+ + + S + +A + M G+ P V ++DG K
Sbjct: 266 DVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKA 325
Query: 188 GLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSY 247
G + A ++ G M G P++V +T++++GY + + R++ +M + G+ PNAF+Y
Sbjct: 326 GEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTY 385
Query: 248 TVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIE 307
++L+ LC +RL A E ++ P + +++GFCK + EA ++ + +
Sbjct: 386 SILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEK 445
Query: 308 K 308
K
Sbjct: 446 K 446
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 68/113 (60%), Gaps = 1/113 (0%)
Query: 180 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 239
++ GLC G ++AL+L G+M G P+IV Y +++G+ K+++ + A +F+ ++S
Sbjct: 212 LIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGS 271
Query: 240 I-SPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCK 291
+ SP+ +YT ++ G CK ++++A +ML G P TF LV+G+ K
Sbjct: 272 VCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAK 324
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 72/138 (52%), Gaps = 3/138 (2%)
Query: 164 IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
++++M G+ PNA +++ LC + + +A +L G + K IP+ +Y V++G+
Sbjct: 369 LWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFC 428
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
KA K ++A I +M+ P+ ++T+L+ G C R+ +A +M+ G SP+
Sbjct: 429 KAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKI 488
Query: 281 TFVDLVEGFCKEQGIEEA 298
T L+ K +EA
Sbjct: 489 TVSSLLSCLLKAGMAKEA 506
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 3/165 (1%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A+EI KM G P+ V +++DG C+ G V + +L+ M +G P Y+ ++
Sbjct: 331 AEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILIN 390
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
++ A+ + ++ S I P F Y ++ G CK ++ +A EM + P
Sbjct: 391 ALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKP 450
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
+ TF L+ G C + + EA ++ G + ++ V L+
Sbjct: 451 DKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLS 495
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 3/133 (2%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
++L+ L K V++A+KLF + + + ++ G KA+ A + M
Sbjct: 176 SLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGF 235
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH--SPNVTTFVDLVEGFCKEQGIE 296
G P+ +Y L+QG CK + L A E + +++G SP+V T+ ++ G+CK +
Sbjct: 236 GCEPDIVTYNTLIQGFCKSNELNKASEM-FKDVKSGSVCSPDVVTYTSMISGYCKAGKMR 294
Query: 297 EAKGAIKTLIEKG 309
EA + ++ G
Sbjct: 295 EASSLLDDMLRLG 307
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 4/123 (3%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A E+ ++ +IP ++DG CK G V EA + M +K P+ + +T ++
Sbjct: 401 ARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILII 460
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G+ + +A IF KM + G SP+ + + L+ L K ++A+ ++ G S
Sbjct: 461 GHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL-NQIARKGQSN 519
Query: 278 NVT 280
NV
Sbjct: 520 NVV 522
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 80/152 (52%), Gaps = 3/152 (1%)
Query: 162 DEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEG 218
+++ +M G PN V ++ + + EA+ +F M+E G P+ V Y +++
Sbjct: 384 NKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDI 443
Query: 219 YTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPN 278
+ KA D A ++++MQ+ G+SP+ F+Y+V++ L K L A + EM++ G +PN
Sbjct: 444 HAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPN 503
Query: 279 VTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
+ T+ +++ K + + A + + GF
Sbjct: 504 LVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 84/165 (50%), Gaps = 3/165 (1%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A +++++M+ GL P+ +++ L K G + A KLF M ++G P +V Y +++
Sbjct: 453 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD 512
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
+ KA +A +++R MQ+ G P+ +Y+++++ L C L++A EM + P
Sbjct: 513 LHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP 572
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
+ + LV+ + K +E+A + ++ G N L+
Sbjct: 573 DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLS 617
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A ++F +M + G PN V M+D K Q ALKL+ M+ G P+ V Y+ V+E
Sbjct: 488 AHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVME 547
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
++A+ +F +MQ P+ Y +LV K ++ A+++ ML AG P
Sbjct: 548 VLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRP 607
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
NV T L+ F + I EA ++ ++ G
Sbjct: 608 NVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL 640
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 74/148 (50%), Gaps = 14/148 (9%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A ++++ M+ G P+ V +++ L G ++EA +F M++K IP+ +Y +
Sbjct: 521 QNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLL 580
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
V+ + KA + A + ++ M G+ PN + L+ + +++ +A+E ML G
Sbjct: 581 VDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL 640
Query: 276 SPNVTTFVDLVE-----------GFCKE 292
P++ T+ L+ GFC +
Sbjct: 641 RPSLQTYTLLLSCCTDGRSKLDMGFCGQ 668
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 11/201 (5%)
Query: 113 DVANQLGDSFLDKFKLGFDNKAGNSSETNQSEEATKSSNSNQPAMPEDADEIFKKMKETG 172
+ AN LG + K + GF + + T N + + +++ +M G
Sbjct: 338 NYANALGFFYWLKRQPGFKHDGHTYT--------TMVGNLGRAKQFGEINKLLDEMVRDG 389
Query: 173 LIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAK 229
PN V ++ + ++EA+ +F M+E G P+ V Y +++ + KA D A
Sbjct: 390 CKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAM 449
Query: 230 RIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGF 289
++++MQ G+SP+ F+Y+V++ L K L A EM+ G +PN+ TF ++
Sbjct: 450 DMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALH 509
Query: 290 CKEQGIEEAKGAIKTLIEKGF 310
K + E A + + GF
Sbjct: 510 AKARNYETALKLYRDMQNAGF 530
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 83/165 (50%), Gaps = 3/165 (1%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A +++++M+E GL P+ +++ L K G + A +LF M +G P +V + ++
Sbjct: 448 AMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIA 507
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
+ KA + A +++R MQ+ G P+ +Y+++++ L C L++A EM P
Sbjct: 508 LHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVP 567
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
+ + LV+ + K +++A + +++ G N L+
Sbjct: 568 DEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLS 612
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 76/159 (47%), Gaps = 3/159 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A +F +M+E G P+ V ++D K G + A+ ++ M+E G P+ Y+ +
Sbjct: 411 KEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVI 470
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ KA A R+F +M G +PN ++ +++ K + A + +M AG
Sbjct: 471 INCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGF 530
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNE 314
P+ T+ ++E +EEA+G + K + +E
Sbjct: 531 QPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDE 569
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 14/148 (9%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A ++++ M+ G P+ V +++ L G ++EA +F M+ K +P+ +Y +
Sbjct: 516 ETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLL 575
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
V+ + KA D A + ++ M G+ PN + L+ + R+ +A+ ML G
Sbjct: 576 VDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGL 635
Query: 276 SPNVTTFVDLVE-----------GFCKE 292
P++ T+ L+ GFC +
Sbjct: 636 HPSLQTYTLLLSCCTDARSNFDMGFCGQ 663
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 50/119 (42%)
Query: 195 KLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGL 254
KL M G P V Y ++ Y +A+ +A +F +MQ G P+ +Y L+
Sbjct: 380 KLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIH 439
Query: 255 CKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
K L A + M EAG SP+ T+ ++ K + A ++ +G N
Sbjct: 440 AKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPN 498
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 79/159 (49%), Gaps = 4/159 (2%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLF-GLMREKGTIPEIVIYTA 214
++A ++ +M + N V +++GLCK G +A ++ L++EK Y +
Sbjct: 536 QNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNS 595
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
+++G+ K D A +R+M NG SPN ++T L+ G CK +R+ A E EM
Sbjct: 596 IIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSME 655
Query: 275 HSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
++ + L++GFCK+ ++ A L E G N
Sbjct: 656 LKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPN 694
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 6/155 (3%)
Query: 158 PEDADEIFKKMKET----GLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 213
PE A EIF E+ G + N + +L CK G V A +M +KG P +V Y
Sbjct: 431 PEAALEIFNDSFESWIAHGFMCNKIFLL--FCKQGKVDAATSFLKMMEQKGIEPNVVFYN 488
Query: 214 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 273
++ + + D A+ IF +M G+ PN F+Y++L+ G K Q+A++ +M +
Sbjct: 489 NMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNAS 548
Query: 274 GHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
N + ++ G CK +AK ++ LI++
Sbjct: 549 NFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKE 583
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 73/135 (54%), Gaps = 3/135 (2%)
Query: 161 ADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A E+ +MK L +P A++DG CK ++ A LF + E G +P + +Y +++
Sbjct: 644 ALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLIS 703
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G+ K D A +++KM ++GIS + F+YT ++ GL K + A + E+L+ G P
Sbjct: 704 GFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVP 763
Query: 278 NVTTFVDLVEGFCKE 292
+ + LV G K+
Sbjct: 764 DEILHMVLVNGLSKK 778
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 71/135 (52%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
+++DG K G A++ + M E G P +V +T+++ G+ K+++ D A + +M+S
Sbjct: 595 SIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSM 654
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
+ + +Y L+ G CK + ++ A+ E+ E G PNV+ + L+ GF ++ A
Sbjct: 655 ELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAA 714
Query: 299 KGAIKTLIEKGFAVN 313
K ++ G + +
Sbjct: 715 IDLYKKMVNDGISCD 729
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 3/131 (2%)
Query: 161 ADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A +++KKM G+ + M+DGL KDG + A L+ + + G +P+ +++ +V
Sbjct: 714 AIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVN 773
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G +K + A ++ +M+ ++PN Y+ ++ G + L +AF EMLE G
Sbjct: 774 GLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVH 833
Query: 278 NVTTFVDLVEG 288
+ T F LV G
Sbjct: 834 DDTVFNLLVSG 844
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 71/145 (48%), Gaps = 4/145 (2%)
Query: 158 PEDADEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIV-IYT 213
PE+A +IF+++ G P+ + + CK + AL L MR K +P YT
Sbjct: 255 PEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYT 314
Query: 214 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 273
+V+ + K ++A R+ +M GI + + T LV G CK + L A + M E
Sbjct: 315 SVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEE 374
Query: 274 GHSPNVTTFVDLVEGFCKEQGIEEA 298
G +P+ F +VE FCK +E+A
Sbjct: 375 GLAPDKVMFSVMVEWFCKNMEMEKA 399
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 77/159 (48%), Gaps = 3/159 (1%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+ A E +++M E G PN V ++++G CK + AL++ M+ ++ Y A+
Sbjct: 607 DSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGAL 666
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++G+ K + A +F ++ G+ PN Y L+ G ++ A + +M+ G
Sbjct: 667 IDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGI 726
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNE 314
S ++ T+ +++G K+ I A L++ G +E
Sbjct: 727 SCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDE 765
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 86/186 (46%), Gaps = 4/186 (2%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A +F ++ E GL+PN +++ G G + A+ L+ M G ++ YT +++
Sbjct: 679 AYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMID 738
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G K + A ++ ++ GI P+ + VLV GL K + A + EM + +P
Sbjct: 739 GLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTP 798
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLNKKKPFSPSVWEAIFG 337
NV + ++ G +E + EA ++EKG V++ V + L + P I
Sbjct: 799 NVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGI-VHDDTVFNLLVSGRVEKPPAASKISS 857
Query: 338 KKAPQM 343
+P+M
Sbjct: 858 LASPEM 863
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 79/199 (39%), Gaps = 37/199 (18%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A ++F +M+E GL P+ V M++ CK+ +++A++ + M+ P V+ +++
Sbjct: 364 ALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQ 423
Query: 218 GYTKAH----------------------------------KADDAKRIFRKMQSNGISPN 243
G KA K D A + M+ GI PN
Sbjct: 424 GCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPN 483
Query: 244 AFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIK 303
Y ++ C+ + A EMLE G PN T+ L++GF K + + A I
Sbjct: 484 VVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVIN 543
Query: 304 TLIEKGFAVNEKAVKDFLN 322
+ F NE +N
Sbjct: 544 QMNASNFEANEVIYNTIIN 562
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 88/192 (45%), Gaps = 37/192 (19%)
Query: 159 EDADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E+A + +M G+ + A ++++G CK + +AL LF M E+G P+ V+++ +
Sbjct: 327 EEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVM 386
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSR-------LQDAFE--- 265
VE + K + + A + +M+S I+P++ ++QG K D+FE
Sbjct: 387 VEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWI 446
Query: 266 ------------FC-----------VEMLEA-GHSPNVTTFVDLVEGFCKEQGIEEAKGA 301
FC ++M+E G PNV + +++ C+ + ++ A+
Sbjct: 447 AHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSI 506
Query: 302 IKTLIEKGFAVN 313
++EKG N
Sbjct: 507 FSEMLEKGLEPN 518
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 71/140 (50%), Gaps = 4/140 (2%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
+++ K+G ++EA+++ M G ++ T++V GY K ++ A +F +M+
Sbjct: 315 SVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEE 374
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCK----EQG 294
G++P+ ++V+V+ CK ++ A EF + M +P+ +++G K E
Sbjct: 375 GLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAA 434
Query: 295 IEEAKGAIKTLIEKGFAVNE 314
+E + ++ I GF N+
Sbjct: 435 LEIFNDSFESWIAHGFMCNK 454
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 70/155 (45%), Gaps = 1/155 (0%)
Query: 169 KETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDA 228
K +P +L L + L+ EA +++ M G + V ++ + K ++A
Sbjct: 199 KVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEA 258
Query: 229 KRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEML-EAGHSPNVTTFVDLVE 287
+IFR++ S G P+ +++ VQ CK L A + EM + G + T+ ++
Sbjct: 259 VKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIV 318
Query: 288 GFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
F KE +EEA + ++ G ++ A +N
Sbjct: 319 AFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVN 353
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 91/183 (49%), Gaps = 5/183 (2%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
DE+ ++MK+ G P+ VA +++ CK +EA++ F M ++ P I+ +++
Sbjct: 251 VDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLIN 310
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G K +DA F + +S+G A +Y LV C R++DA++ EM G P
Sbjct: 311 GLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGP 370
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTL-IEKGFAVNEKAVKDFLNKKK-PFSPSVWEAI 335
N T+ ++ + Q +EA +T+ E + E V+ F NK++ + +W+ +
Sbjct: 371 NARTYDIILHHLIRMQRSKEAYEVYQTMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEM 430
Query: 336 FGK 338
GK
Sbjct: 431 KGK 433
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 3/166 (1%)
Query: 160 DADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA ++F KMK+ P+ +L+G ++ + ++ M+++G P++V Y ++
Sbjct: 215 DAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIII 274
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+ KA K ++A R F +M+ P+ + L+ GL +L DA EF +G
Sbjct: 275 NAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFP 334
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
T+ LV +C Q +E+A + + KG N + L+
Sbjct: 335 LEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILH 380
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 3/137 (2%)
Query: 165 FKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTK 221
F KM+E G + MLD L K V +A K+F M++K P+I YT ++EG+ +
Sbjct: 185 FHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQ 244
Query: 222 AHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTT 281
+ R+M+ G P+ +Y +++ CK + ++A F EM + P+
Sbjct: 245 ELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHI 304
Query: 282 FVDLVEGFCKEQGIEEA 298
F L+ G E+ + +A
Sbjct: 305 FCSLINGLGSEKKLNDA 321
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 6/154 (3%)
Query: 160 DADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA E F++ K +G P A++ C +++A K MR KG P Y ++
Sbjct: 320 DALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIIL 379
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+ ++ +A +++ M P +Y ++V+ C RL A + EM G
Sbjct: 380 HHLIRMQRSKEAYEVYQTMSCE---PTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVL 436
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
P + F L+ C E ++EA +++ G
Sbjct: 437 PGMHMFSSLITALCHENKLDEACEYFNEMLDVGI 470
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 55/109 (50%)
Query: 190 VQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTV 249
V+EA+ F M E G E + +++ +K+ DA+++F KM+ P+ SYT+
Sbjct: 178 VKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTI 237
Query: 250 LVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
L++G + L E EM + G P+V + ++ CK + EEA
Sbjct: 238 LLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEA 286
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 76/143 (53%), Gaps = 1/143 (0%)
Query: 180 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 239
M+ LCK G V+E+ M+++G P++ +Y A++E KA AK+++ +M G
Sbjct: 403 MISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEG 462
Query: 240 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAK 299
N +Y VL++ L + +++ +MLE G P+ T ++ L+EG CKE IE A
Sbjct: 463 CKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAM 522
Query: 300 GAIKTLIEKGF-AVNEKAVKDFL 321
+ +E+ V + + +F+
Sbjct: 523 EVFRKCMERDHKTVTRRVLSEFV 545
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 5/161 (3%)
Query: 158 PEDADEIFKKMKETGLIPNAVAMLD----GLCKDGLVQEALKLFGLMREKGTIPEIVIYT 213
P+ A E M TG +P A+ L LC+ +K + L+ KG E+ Y+
Sbjct: 343 PDSAVEFLVYMVSTGKLP-AIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYS 401
Query: 214 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 273
++ KA + ++ ++M+ G++P+ Y L++ CK ++ A + EM
Sbjct: 402 LMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVE 461
Query: 274 GHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNE 314
G N+TT+ L+ +E EE+ ++E+G +E
Sbjct: 462 GCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDE 502
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 63/114 (55%), Gaps = 3/114 (2%)
Query: 165 FKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTK 221
++MK+ GL P+ A+++ CK +++ A KL+ M +G + Y ++ ++
Sbjct: 420 LQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSE 479
Query: 222 AHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+A+++ R+F KM GI P+ Y L++GLCK ++++ A E + +E H
Sbjct: 480 EGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDH 533
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 75/150 (50%), Gaps = 3/150 (2%)
Query: 161 ADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A ++ KKM+ G I + ++ LC++G +A K + +G + +V TA ++
Sbjct: 528 ALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAID 587
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G K D +FR + +NG P+ +Y VL++ LCK R +A EM+ G P
Sbjct: 588 GLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKP 647
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIE 307
V T+ +++G+CKE I+ I + E
Sbjct: 648 TVATYNSMIDGWCKEGEIDRGLSCIVRMYE 677
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+AD +F +M GL P +M+DG CK+G + L M E P+++ YT+++
Sbjct: 632 EADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLI 691
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G + + +A + +M+ PN ++ L+QGLCKC +A + EM E
Sbjct: 692 HGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEME 751
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
P+ ++ LV F + I G + ++ KG
Sbjct: 752 PDSAVYLSLVSSFLSSENINAGFGIFREMVHKG 784
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 64/132 (48%), Gaps = 3/132 (2%)
Query: 163 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 219
E+F+ + G P+ +A ++ LCK EA LF M KG P + Y ++++G+
Sbjct: 600 ELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGW 659
Query: 220 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNV 279
K + D +M + +P+ +YT L+ GLC R +A EM PN
Sbjct: 660 CKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNR 719
Query: 280 TTFVDLVEGFCK 291
TF+ L++G CK
Sbjct: 720 ITFMALIQGLCK 731
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%)
Query: 172 GLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRI 231
G + + A +DGL K+ V L+LF + G P+++ Y +++ KA + +A +
Sbjct: 577 GHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADIL 636
Query: 232 FRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFC 290
F +M S G+ P +Y ++ G CK + V M E +P+V T+ L+ G C
Sbjct: 637 FNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLC 695
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 2/152 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA--MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
E A +F ++ G + ++ ++ CK G V +A +L ++ E+ Y ++
Sbjct: 231 ERALSVFNEILSRGWLDEHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLI 290
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G+ K + D A ++F KM+ G++ + Y VL+ GLCK L+ A +E+ +G
Sbjct: 291 HGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIP 350
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
P+ L+ F +E + I I+K
Sbjct: 351 PDRGILGKLLCSFSEESELSRITEVIIGDIDK 382
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 90/225 (40%), Gaps = 29/225 (12%)
Query: 106 FQGRNRPDVANQLGDSFLDKFKLGFDNKAGNSSETNQSEEATKSSNSNQPAMPED----- 160
F+G R D+ ++ SF+ N GN SE + N+ +P+
Sbjct: 393 FEGFIRNDLVHE-AYSFIQ-------NLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSI 444
Query: 161 -------------ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKG 204
A + + + GLIP + +++G+CK+G +E+LKL G M++ G
Sbjct: 445 VINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAG 504
Query: 205 TIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAF 264
P + + A + +KM+ G P T LV+ LC+ R DA
Sbjct: 505 VEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDAC 564
Query: 265 EFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
++ ++ G ++ ++G K +G++ + + G
Sbjct: 565 KYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANG 609
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 90/183 (49%), Gaps = 8/183 (4%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E+ +++ K+M E+G P+ ++ +++GL + G + +++++F ++ KG +P+ +Y A+
Sbjct: 272 EEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAM 331
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ + A D++ R +R+M PN +Y+ LV GL K ++ DA E EML G
Sbjct: 332 ICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGV 391
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLNKKKPFSP-----S 330
P ++ C A + + G ++E A K L + F +
Sbjct: 392 LPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLN 451
Query: 331 VWE 333
VW+
Sbjct: 452 VWD 454
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 67/150 (44%)
Query: 180 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 239
M+ G K G V+E K+ M E G P+ + Y+ ++EG + + +D+ IF ++ G
Sbjct: 261 MISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKG 320
Query: 240 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAK 299
P+A Y ++ ++ + ML+ PN+ T+ LV G K + + +A
Sbjct: 321 NVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDAL 380
Query: 300 GAIKTLIEKGFAVNEKAVKDFLNKKKPFSP 329
+ ++ +G V FL + P
Sbjct: 381 EIFEEMLSRGVLPTTGLVTSFLKPLCSYGP 410
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 68/131 (51%), Gaps = 3/131 (2%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIP-EIVIYTAVVEGYTKAHKADDAKRIFRKMQS 237
A+L LC+ V A +F +KG IP + Y ++ G++K + ++ +++ ++M
Sbjct: 226 ALLRCLCERSHVSAAKSVFN--AKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVE 283
Query: 238 NGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEE 297
+G P+ SY+ L++GL + R+ D+ E + G+ P+ + ++ F + +E
Sbjct: 284 SGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDE 343
Query: 298 AKGAIKTLIEK 308
+ + ++++
Sbjct: 344 SMRYYRRMLDE 354
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 64/113 (56%)
Query: 180 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 239
++D +C ++EA+ L + G P+ +Y +++G+ K +A +++KM+ G
Sbjct: 236 LIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEG 295
Query: 240 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKE 292
+ P+ +Y L+ GL K R+++A + M++AG+ P+ T+ L+ G C++
Sbjct: 296 VEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRK 348
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 80/168 (47%), Gaps = 4/168 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTI-PEIVIYTA 214
++A ++ K++ E P+ +L LCK + + MR+ + P++V +T
Sbjct: 176 DEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTI 235
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
+++ + +A + K+ + G P+ F Y +++G C S+ +A +M E G
Sbjct: 236 LIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEG 295
Query: 275 HSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
P+ T+ L+ G K +EEA+ +KT+++ G+ + +N
Sbjct: 296 VEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMN 343
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 67/149 (44%), Gaps = 8/149 (5%)
Query: 165 FKKMKETGLIPNAVAMLDGLCK--DGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKA 222
F+ + T LI +L C+ D + ++ LM G P+ V V +
Sbjct: 118 FRPGRSTFLI-----LLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCET 172
Query: 223 HKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA-GHSPNVTT 281
+ D+AK + +++ P+ ++Y L++ LCKC L +EF EM + P++ +
Sbjct: 173 GRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVS 232
Query: 282 FVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
F L++ C + + EA + L GF
Sbjct: 233 FTILIDNVCNSKNLREAMYLVSKLGNAGF 261
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 76/149 (51%), Gaps = 3/149 (2%)
Query: 164 IFKKMKETGLIPNAVAM--LDGLCKDG-LVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
+ +KMK G+ P+A L CK G L QEA ++F M+ G + V Y A+++ Y
Sbjct: 266 LVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYG 325
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
K+H+ +A ++ +M NG SP+ +Y L+ + L +A E +M E G P+V
Sbjct: 326 KSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVF 385
Query: 281 TFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
T+ L+ GF + +E A + + G
Sbjct: 386 TYTTLLSGFERAGKVESAMSIFEEMRNAG 414
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 86/169 (50%), Gaps = 4/169 (2%)
Query: 157 MPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 213
+PE A+ F ++KE G P+ +M+ + +V +A + M+E+G P + Y
Sbjct: 610 LPE-AERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYN 668
Query: 214 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 273
+++ ++++ ++ I R++ + GI P+ SY ++ C+ +R++DA EM +
Sbjct: 669 SLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNS 728
Query: 274 GHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
G P+V T+ + + + EEA G ++ +I+ G N+ ++
Sbjct: 729 GIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVD 777
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 79/157 (50%), Gaps = 3/157 (1%)
Query: 158 PEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 214
P++A ++ +M G P+ V +++ +DG++ EA++L M EKGT P++ YT
Sbjct: 330 PKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTT 389
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
++ G+ +A K + A IF +M++ G PN ++ ++ + + + E+ G
Sbjct: 390 LLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCG 449
Query: 275 HSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
SP++ T+ L+ F + E G K + GF
Sbjct: 450 LSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV 486
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 3/137 (2%)
Query: 156 AMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIY 212
++ ++A ++F++MK G + V A+LD K +EA+K+ M G P IV Y
Sbjct: 293 SLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTY 352
Query: 213 TAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 272
+++ Y + D+A + +M G P+ F+YT L+ G + +++ A EM
Sbjct: 353 NSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRN 412
Query: 273 AGHSPNVTTFVDLVEGF 289
AG PN+ TF ++ +
Sbjct: 413 AGCKPNICTFNAFIKMY 429
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 9/155 (5%)
Query: 157 MPEDADEIFKKMKETGLIP-----NAVAMLDGLCKD-GLVQEALKLFGLMREKGTIPEIV 210
M A+ + MKE G P N++ + D G +E L+ + KG P+I+
Sbjct: 644 MVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILRE---ILAKGIKPDII 700
Query: 211 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 270
Y V+ Y + + DA RIF +M+++GI P+ +Y + S ++A M
Sbjct: 701 SYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYM 760
Query: 271 LEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTL 305
++ G PN T+ +V+G+CK +EAK ++ L
Sbjct: 761 IKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 3/155 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A ++++M + G+ P+ +L L + G+ +++ K+ M + P + Y ++
Sbjct: 506 EQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSL 565
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ Y + + ++ S I P A LV KC L +A E+ E G
Sbjct: 566 LHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGF 625
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
SP++TT +V + + Q + +A G + + E+GF
Sbjct: 626 SPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGF 660
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 72/152 (47%), Gaps = 7/152 (4%)
Query: 163 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 219
+IF ++ GL P+ V +L ++G+ E +F M+ G +PE + ++ Y
Sbjct: 440 KIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAY 499
Query: 220 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNV 279
++ + A ++R+M G++P+ +Y ++ L + + + + EM + PN
Sbjct: 500 SRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNE 559
Query: 280 TTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
T+ L+ + + I G + +L E+ ++
Sbjct: 560 LTYCSLLHAYANGKEI----GLMHSLAEEVYS 587
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 68/150 (45%), Gaps = 3/150 (2%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A IF++M+ G PN A + G E +K+F + G P+IV + +
Sbjct: 401 ESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTL 460
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ + + + +F++M+ G P ++ L+ +C + A ML+AG
Sbjct: 461 LAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGV 520
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTL 305
+P+++T+ ++ + E+++ + +
Sbjct: 521 TPDLSTYNTVLAALARGGMWEQSEKVLAEM 550
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 77/160 (48%), Gaps = 6/160 (3%)
Query: 165 FKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHK 224
++ M + ++ ++ML K+G V A +F ++E G ++ YT+++ + + +
Sbjct: 167 YQSMLDNSVVAIIISMLG---KEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGR 223
Query: 225 ADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA-GHSPNVTTFV 283
+A +F+KM+ +G P +Y V++ K + VE +++ G +P+ T+
Sbjct: 224 YREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYN 283
Query: 284 DLVEGFCKEQGI-EEAKGAIKTLIEKGFAVNEKAVKDFLN 322
L+ CK + +EA + + GF+ ++ L+
Sbjct: 284 TLITC-CKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLD 322
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/161 (19%), Positives = 64/161 (39%), Gaps = 3/161 (1%)
Query: 154 QPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIV 210
Q M + +FK+MK G +P ++ + G ++A+ ++ M + G P++
Sbjct: 466 QNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLS 525
Query: 211 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 270
Y V+ + + ++++ +M+ PN +Y L+ + E+
Sbjct: 526 TYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEV 585
Query: 271 LEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
P LV K + EA+ A L E+GF+
Sbjct: 586 YSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFS 626
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 86/172 (50%), Gaps = 6/172 (3%)
Query: 160 DADEIFKKMKE--TGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
+A +F+++K+ T ++DG C+ + EAL+L +M +G P +V Y +++
Sbjct: 291 EATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILR 350
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
+ + +A R+ +M I P+ + L+ CK + A + +M+E+G
Sbjct: 351 KLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKL 410
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF----AVNEKAVKDFLNKKK 325
++ ++ L+ GFCK +E AK + ++IEKGF A V F N+ K
Sbjct: 411 DMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNK 462
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 74/148 (50%), Gaps = 3/148 (2%)
Query: 154 QPAMPEDADEIFKKMKETGLIPN---AVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIV 210
+ M D+ +F++++ GL P+ +L+ L K L K+F M + G + I
Sbjct: 145 KAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIH 204
Query: 211 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 270
+Y +V +K+ + A+++ +M+ G+ P+ F+Y L+ CK S +A M
Sbjct: 205 VYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRM 264
Query: 271 LEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
+G +PN+ T+ + GF +E + EA
Sbjct: 265 ERSGVAPNIVTYNSFIHGFSREGRMREA 292
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 77/160 (48%), Gaps = 6/160 (3%)
Query: 160 DADEIFKK---MKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 213
D DE + M+ G P V ++L LC+DG ++EA +L M K P+ +
Sbjct: 322 DIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCN 381
Query: 214 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 273
++ Y K A ++ +KM +G+ + +SY L+ G CK L++A E M+E
Sbjct: 382 TLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEK 441
Query: 274 GHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
G SP T+ LV+GF + +E ++ ++G +
Sbjct: 442 GFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCAD 481
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 80/158 (50%), Gaps = 4/158 (2%)
Query: 157 MPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 213
+ + +IFKKM + G++ N ++ K G ++A KL M EKG P+I Y
Sbjct: 183 LTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYN 242
Query: 214 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 273
++ Y K +A + +M+ +G++PN +Y + G + R+++A E ++
Sbjct: 243 TLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE-IKD 301
Query: 274 GHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
+ N T+ L++G+C+ I+EA + + +GF+
Sbjct: 302 DVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFS 339
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 12/165 (7%)
Query: 158 PEDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
PED +F + +I A K G++ +++ +F +R G P + T ++
Sbjct: 129 PEDVSHVFSWL----MIYYA--------KAGMINDSIVVFEQIRSCGLKPHLQACTVLLN 176
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
K D +IF+KM G+ N Y VLV K + A + EM E G P
Sbjct: 177 SLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFP 236
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
++ T+ L+ +CK+ EA + G A N F++
Sbjct: 237 DIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIH 281
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 72/161 (44%), Gaps = 3/161 (1%)
Query: 161 ADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A ++ KKM E+GL + + A++ G CK ++ A + M EKG P Y+ +V+
Sbjct: 396 AVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVD 455
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G+ +K D+ ++ + + G+ + Y L++ +CK ++ A M + G
Sbjct: 456 GFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVG 515
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVK 318
+ F + + + + EA + + VN K K
Sbjct: 516 DSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYK 556
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 80/153 (52%), Gaps = 3/153 (1%)
Query: 161 ADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A +++ KE GL+ + + ++ GLCK G ++E L++ MRE P++ YTA+++
Sbjct: 247 ALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIK 306
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
D + R++ +M+ + I P+ +Y LV GLCK R++ +E +EM
Sbjct: 307 TLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILI 366
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
+ + L+EGF + + A + L++ G+
Sbjct: 367 DREIYRVLIEGFVADGKVRSACNLWEDLVDSGY 399
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 67/136 (49%), Gaps = 3/136 (2%)
Query: 164 IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
+++KMK+ G P ++D L K+G AL ++ +E G + E + +V+G
Sbjct: 215 VYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLC 274
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
KA + ++ I ++M+ N P+ F+YT +++ L L + EM P+V
Sbjct: 275 KAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVM 334
Query: 281 TFVDLVEGFCKEQGIE 296
+ LV G CK+ +E
Sbjct: 335 AYGTLVVGLCKDGRVE 350
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 76/153 (49%), Gaps = 3/153 (1%)
Query: 159 EDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E+ EI ++M+E P+ AM+ L +G + +L+++ MR P+++ Y +
Sbjct: 280 EEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTL 339
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
V G K + + +F +M+ I + Y VL++G +++ A +++++G+
Sbjct: 340 VVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGY 399
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
++ + +++G C +++A + IE+
Sbjct: 400 IADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEE 432
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 77/160 (48%), Gaps = 3/160 (1%)
Query: 164 IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
++ +M+ + P+ +A ++ GLCKDG V+ +LF M+ K + + IY ++EG+
Sbjct: 320 VWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFV 379
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
K A ++ + +G + Y +++GLC +++ A++ +E P+
Sbjct: 380 ADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFE 439
Query: 281 TFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDF 320
T ++ + + + ++ + E G+ V++ + F
Sbjct: 440 TLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFF 479
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 74/152 (48%), Gaps = 15/152 (9%)
Query: 180 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 239
MLD + G +Q +F LM+EKG + + V YT+++ + + D A R++ +M+ NG
Sbjct: 128 MLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNG 187
Query: 240 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVE-----GFCKEQ- 293
P SYT ++ L R+++A E EML + SPN T+ L+E G C+E
Sbjct: 188 CEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEAL 247
Query: 294 ---------GIEEAKGAIKTLIEKGFAVNEKA 316
G++ K A LI K E +
Sbjct: 248 DIFFKMQEIGVQPDKAACNILIAKALKFGETS 279
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 77/150 (51%), Gaps = 18/150 (12%)
Query: 164 IFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
+F MKE G++ + V +++ + G V A++L+ MR+ G P +V YTA ++
Sbjct: 144 VFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLF 203
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP--- 277
+ ++A ++++M + +SPN +YTVL++ L + ++A + +M E G P
Sbjct: 204 ADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKA 263
Query: 278 --NV----------TTFVDLVEGFCKEQGI 295
N+ T+F+ V + KE G+
Sbjct: 264 ACNILIAKALKFGETSFMTRVLVYMKENGV 293
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 86/186 (46%), Gaps = 6/186 (3%)
Query: 128 LGFDNKAGNSSETNQSEEATKSSNSNQPAMPEDADEIFKKMKETGLIPNAV---AMLDGL 184
+GF K N SN+ +M ++ + +K+ E G IP++ A + L
Sbjct: 309 VGFMEKDSNLQRVGYDAVLYCLSNN---SMAKETGQFLRKIGERGYIPDSSTFNAAMSCL 365
Query: 185 CKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNA 244
K + E ++F +G P Y +V+ A + + R ++M +G+ +
Sbjct: 366 LKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSV 425
Query: 245 FSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKT 304
+SY ++ LCK R+++A F EM + G SPN+ TF + G+ +++ G ++
Sbjct: 426 YSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEK 485
Query: 305 LIEKGF 310
L+ GF
Sbjct: 486 LLVHGF 491
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 85/163 (52%), Gaps = 3/163 (1%)
Query: 163 EIFKKMKETGLIPN---AVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 219
E+ K+++++G + ++ + GL + +F + G P +Y AV++
Sbjct: 131 ELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDAL 190
Query: 220 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNV 279
K++ D A F++M+S+G P+ F+Y +L+ G+CK + +A +M + G+ PNV
Sbjct: 191 VKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNV 250
Query: 280 TTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
T+ L++GF ++EA ++ + + NE ++ F++
Sbjct: 251 FTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVH 293
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+ D K+M GL+ + A++D LCK ++ A M+++G P +V + +
Sbjct: 408 EGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFL 467
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
GY+ + K+ +G P+ ++++++ LC+ ++DAF+ EMLE G
Sbjct: 468 SGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIE 527
Query: 277 PNVTTFVDLVEGFC 290
PN T+ L+ C
Sbjct: 528 PNEITYNILIRSCC 541
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 77/155 (49%), Gaps = 3/155 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E+A +M++ G+ PN V L G G V++ + + G P+++ ++ +
Sbjct: 442 ENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLI 501
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ +A + DA F++M GI PN +Y +L++ C + + +M E G
Sbjct: 502 INCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGL 561
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
SP++ + ++ FCK + +++A+ +KT++ G
Sbjct: 562 SPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGL 596
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 3/126 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+DA + FK+M E G+ PN + ++ C G ++KLF M+E G P++ Y A
Sbjct: 512 KDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNAT 571
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++ + K K A+ + + M G+ P+ F+Y+ L++ L + R +A E + G
Sbjct: 572 IQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGC 631
Query: 276 SPNVTT 281
P+ T
Sbjct: 632 VPDSYT 637
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 74/158 (46%), Gaps = 4/158 (2%)
Query: 164 IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
+ +K+ G P+ + +++ LC+ +++A F M E G P + Y ++
Sbjct: 482 VLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCC 541
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
D + ++F KM+ NG+SP+ ++Y +Q CK +++ A E ML G P+
Sbjct: 542 STGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNF 601
Query: 281 TFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVK 318
T+ L++ E G E + + IE+ V + K
Sbjct: 602 TYSTLIKAL-SESGRESEAREMFSSIERHGCVPDSYTK 638
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 59/111 (53%), Gaps = 3/111 (2%)
Query: 165 FKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTK 221
F++M+ G P+ ++ G+CK G+V EA++L M ++G P + YT +++G+
Sbjct: 203 FQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLI 262
Query: 222 AHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 272
A + D+A + M+ ++PN + V G+ +C AFE V +E
Sbjct: 263 AGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFME 313
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 3/137 (2%)
Query: 156 AMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIY 212
+ + +++F ++ G+ P+ A++D L K + A F MR G P+ Y
Sbjct: 159 GLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTY 218
Query: 213 TAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 272
++ G K D+A R+ ++M+ G PN F+YT+L+ G R+ +A + M
Sbjct: 219 NILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRV 278
Query: 273 AGHSPNVTTFVDLVEGF 289
+PN T V G
Sbjct: 279 RKLNPNEATIRTFVHGI 295
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%)
Query: 204 GTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDA 263
G + + Y AV++ KA + ++A +MQ GISPN ++ + G ++
Sbjct: 420 GLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKV 479
Query: 264 FEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNE 314
++L G P+V TF ++ C+ + I++A K ++E G NE
Sbjct: 480 HGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNE 530
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 71/130 (54%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
+++G K G + +AL+ + M ++ P++ + ++ GY ++ K D A +FR+M+
Sbjct: 198 TVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEK 257
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
G PN S+ L++G ++++ + EM+E G + T LV+G C+E +++A
Sbjct: 258 GCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDA 317
Query: 299 KGAIKTLIEK 308
G + L+ K
Sbjct: 318 CGLVLDLLNK 327
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 1/143 (0%)
Query: 181 LDGLCKDGLVQEALKLFGLM-REKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 239
+D C+ + AL F M R P + +Y VV GY K+ D A R +++M
Sbjct: 164 IDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKER 223
Query: 240 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAK 299
P+ ++ +L+ G C+ S+ A + EM E G PNV +F L+ GF IEE
Sbjct: 224 AKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGV 283
Query: 300 GAIKTLIEKGFAVNEKAVKDFLN 322
+IE G +E + ++
Sbjct: 284 KMAYEMIELGCRFSEATCEILVD 306
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A ++F++MKE G PN V+ ++ G G ++E +K+ M E G +V+
Sbjct: 247 ALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVD 306
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G + + DDA + + + + P+ F Y LV+ LC ++ A E E+ + G +P
Sbjct: 307 GLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTP 366
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
LVEG K E+A G ++ ++ G
Sbjct: 367 CFIACTTLVEGLRKSGRTEKASGFMEKMMNAGI 399
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 67/130 (51%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
++++ LC + A+++ + +KG P + T +VEG K+ + + A KM +
Sbjct: 338 SLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNA 397
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
GI P++ ++ +L++ LC DA + G+ P+ TT+ LV GF KE +E
Sbjct: 398 GILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEG 457
Query: 299 KGAIKTLIEK 308
+ + +++K
Sbjct: 458 EVLVNEMLDK 467
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%)
Query: 180 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 239
+++G C+ AL LF M+EKG P +V + ++ G+ + K ++ ++ +M G
Sbjct: 234 LINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELG 293
Query: 240 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAK 299
+ + +LV GLC+ R+ DA +++L P+ + LVE C E A
Sbjct: 294 CRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAM 353
Query: 300 GAIKTLIEKG 309
++ L +KG
Sbjct: 354 EMMEELWKKG 363
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%)
Query: 180 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 239
++DGLC++G V +A L + K +P Y ++VE +KA A + ++ G
Sbjct: 304 LVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKG 363
Query: 240 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAK 299
+P + T LV+GL K R + A F +M+ AG P+ TF L+ C +A
Sbjct: 364 QTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDAN 423
Query: 300 GAIKTLIEKGFAVNE 314
KG+ +E
Sbjct: 424 RLRLLASSKGYEPDE 438
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 3/132 (2%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A E+ +++ + G P +A +++GL K G ++A M G +P+ V + ++
Sbjct: 352 AMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLR 411
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
+ + DA R+ S G P+ +Y VLV G K R ++ EML+ P
Sbjct: 412 DLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLP 471
Query: 278 NVTTFVDLVEGF 289
++ T+ L++G
Sbjct: 472 DIFTYNRLMDGL 483
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 78/153 (50%), Gaps = 3/153 (1%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A E+ ++MKE GL+P++V+ ++ G +G ++ A M ++G +P Y ++
Sbjct: 311 ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIH 370
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G +K + A+ + R+++ GI ++ +Y +L+ G C+ + AF EM+ G P
Sbjct: 371 GLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQP 430
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
T+ L+ C++ EA + ++ KG
Sbjct: 431 TQFTYTSLIYVLCRKNKTREADELFEKVVGKGM 463
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 3/160 (1%)
Query: 160 DADEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+ADE+F+K+ G+ P+ V M +DG C G + A L M P+ V Y ++
Sbjct: 450 EADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLM 509
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G K ++A+ + +M+ GI P+ SY L+ G K + AF EML G +
Sbjct: 510 RGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFN 569
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKA 316
P + T+ L++G K Q E A+ ++ + +G N+ +
Sbjct: 570 PTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSS 609
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 119/293 (40%), Gaps = 39/293 (13%)
Query: 67 IPSTKPVNQRTREYNRGSRSRFDGNRDEV----EKTTMKSDLGFQGRNRPDVANQLGDSF 122
+ S KPV Q +E ++ DE+ ++ KS + F R ++ D
Sbjct: 115 LSSPKPVTQLLKEVVTSRKNSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEA 174
Query: 123 LDKFKLGFDNKAGNSSET-NQSEEATKSSNSNQPAMPEDADEIFKKMKETGLIPNAVAML 181
++ F L + +ET N N + A AD ++K N M+
Sbjct: 175 IECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNI--MI 232
Query: 182 DGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRI---------- 231
+ LCK+G +++A G+M G P IV Y +V+G++ + + A+ I
Sbjct: 233 NVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQ 292
Query: 232 ----------------------FRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVE 269
R+M+ G+ P++ SY +L++G L+ AF + E
Sbjct: 293 PDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDE 352
Query: 270 MLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
M++ G P T+ L+ G E IE A+ I+ + EKG ++ +N
Sbjct: 353 MVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILIN 405
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 74/155 (47%), Gaps = 3/155 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A+ + ++++E G++ ++V +++G C+ G ++A L M G P YT++
Sbjct: 379 EAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSL 438
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ + +K +A +F K+ G+ P+ L+ G C + AF EM
Sbjct: 439 IYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSI 498
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
+P+ T+ L+ G C E EEA+ + + +G
Sbjct: 499 NPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGI 533
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 3/132 (2%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A + K+M + P+ V ++ GLC +G +EA +L G M+ +G P+ + Y ++
Sbjct: 486 AFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLIS 545
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
GY+K A + +M S G +P +Y L++GL K + A E EM G P
Sbjct: 546 GYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVP 605
Query: 278 NVTTFVDLVEGF 289
N ++F ++E
Sbjct: 606 NDSSFCSVIEAM 617
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 67/132 (50%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
+++ LC+ +EA +LF + KG P++V+ +++G+ D A + ++M
Sbjct: 437 SLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMM 496
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
I+P+ +Y L++GLC + ++A E EM G P+ ++ L+ G+ K+ + A
Sbjct: 497 SINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHA 556
Query: 299 KGAIKTLIEKGF 310
++ GF
Sbjct: 557 FMVRDEMLSLGF 568
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E+A E+ +MK G+ P+ ++ ++ G K G + A + M G P ++ Y A+
Sbjct: 519 EEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNAL 578
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGL 254
++G +K + + A+ + R+M+S GI PN S+ +++ +
Sbjct: 579 LKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAM 617
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 78/152 (51%), Gaps = 3/152 (1%)
Query: 161 ADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A E F K K G++P+A ++ G + A K+F M E+ + +++ Y A+++
Sbjct: 192 AQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLD 251
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
K+ D ++F++M + G+ P+A+S+ + + C + A++ M P
Sbjct: 252 ALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVP 311
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
NV TF +++ CK + +++A + +I+KG
Sbjct: 312 NVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKG 343
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 68/141 (48%), Gaps = 3/141 (2%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A ++F +M E + + +A +LD LCK G V K+F M G P+ + +
Sbjct: 227 ARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIH 286
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
Y A A ++ +M+ + PN +++ +++ LCK ++ DA+ EM++ G +P
Sbjct: 287 AYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANP 346
Query: 278 NVTTFVDLVEGFCKEQGIEEA 298
+ T+ ++ C + A
Sbjct: 347 DTWTYNSIMAYHCDHCEVNRA 367
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 3/149 (2%)
Query: 157 MPEDADEIFKKMKETGLIP---NAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 213
+P +A F +M E G+ P + +L LC V A + FG + G +P Y+
Sbjct: 153 LPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYS 212
Query: 214 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 273
+V G+ + A A+++F +M + +Y L+ LCK + ++ EM
Sbjct: 213 ILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNL 272
Query: 274 GHSPNVTTFVDLVEGFCKEQGIEEAKGAI 302
G P+ +F + +C + A +
Sbjct: 273 GLKPDAYSFAIFIHAYCDAGDVHSAYKVL 301
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 74/153 (48%), Gaps = 4/153 (2%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A ++ +MK L+PN ++ LCK+ V +A L M +KG P+ Y +++
Sbjct: 297 AYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMA 356
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
+ + + A ++ +M P+ +Y ++++ L + R A E M E P
Sbjct: 357 YHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYP 416
Query: 278 NVTTFVDLVEGFCKEQG-IEEAKGAIKTLIEKG 309
V T+ ++ G +++G +EEA + +I++G
Sbjct: 417 TVATYTVMIHGLVRKKGKLEEACRYFEMMIDEG 449
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 2/142 (1%)
Query: 173 LIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIF 232
L+ N V +DG + G AL + LM G P + A++ GY K + DA +
Sbjct: 406 LLWNVV--IDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVK 463
Query: 233 RKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKE 292
+M+S I P+ +Y +L+ C L+ AF+ EML G P++ T+ +LV G C +
Sbjct: 464 NEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWK 523
Query: 293 QGIEEAKGAIKTLIEKGFAVNE 314
+++A+ + + G ++
Sbjct: 524 GRLKKAESLLSRIQATGITIDH 545
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 86/202 (42%), Gaps = 42/202 (20%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIP-------- 207
E AD + ++M+E G PN V+ ++ GLC V +AL LF M + G P
Sbjct: 173 EKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNII 232
Query: 208 -------------------------------EIVIYTAVVEGYTKAHKADDAKRIFRKMQ 236
+IVI T +++ K A ++++M
Sbjct: 233 VHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMS 292
Query: 237 SNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIE 296
+ ++ Y V+++GLC + A+ F +M++ G +P+V T+ L+ CKE +
Sbjct: 293 QKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFD 352
Query: 297 EAKGAIKTLIEKGFAVNEKAVK 318
EA T+ G A ++ + K
Sbjct: 353 EACDLHGTMQNGGVAPDQISYK 374
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 77/156 (49%), Gaps = 3/156 (1%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A E++K+M + + ++V ++ GLC G + A M ++G P++ Y ++
Sbjct: 284 ALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLIS 343
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
K K D+A + MQ+ G++P+ SY V++QGLC + A EF + ML++ P
Sbjct: 344 ALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLP 403
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
V + +++G+ + A + ++ G N
Sbjct: 404 EVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPN 439
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
+++ LC G + AL L M G IP ++ + ++ G KA + A + R+M+
Sbjct: 126 SIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREM 185
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGI 295
G SPN SY L++GLC + + A M + G PN T +V C++ I
Sbjct: 186 GPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVI 242
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 58/125 (46%)
Query: 174 IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFR 233
I ++D K+G V +AL+++ M +K + V+Y ++ G + A
Sbjct: 265 IVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMC 324
Query: 234 KMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQ 293
M G++P+ F+Y L+ LCK + +A + M G +P+ ++ +++G C
Sbjct: 325 DMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHG 384
Query: 294 GIEEA 298
+ A
Sbjct: 385 DVNRA 389
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 50/100 (50%)
Query: 211 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 270
I+++++ K D A + +KM +G+ P ++ L+ GLCK ++ A EM
Sbjct: 123 IHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREM 182
Query: 271 LEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
E G SPN ++ L++G C +++A T+ + G
Sbjct: 183 REMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGI 222
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 83/158 (52%), Gaps = 4/158 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+ A+ +F ++ E + V ML G C+ G ++E+L+L+ +M K ++ IV Y +
Sbjct: 307 DKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNIL 365
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++G + K D+A I+R M + G + + +Y + + GLC + A E+ +G
Sbjct: 366 IKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGG 425
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
+V + +++ CK++ +EEA +K + + G +N
Sbjct: 426 HLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELN 463
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 66/132 (50%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
+++D LCK ++EA L M + G + A++ G + + +A R+M N
Sbjct: 434 SIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKN 493
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
G P SY +L+ GLCK + +A F EMLE G P++ T+ L+ G C+++ I+ A
Sbjct: 494 GCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLA 553
Query: 299 KGAIKTLIEKGF 310
++ G
Sbjct: 554 LELWHQFLQSGL 565
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 79/159 (49%), Gaps = 4/159 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A M + G P+ + +++ L K G + +AL+LF M E+G P++ Y +
Sbjct: 166 EKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNIL 225
Query: 216 VEGYTKAHKADDAKRIF-RKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
++G+ K A ++ R ++ + + PN ++ +++ GL KC R+ D + M +
Sbjct: 226 IDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNE 285
Query: 275 HSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
++ T+ L+ G C +++A+ L E+ +++
Sbjct: 286 REKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASID 324
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 4/156 (2%)
Query: 156 AMPEDADEIFKKMKETGLIPNAV----AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVI 211
+MP+ A ++FK+M+E A+ +L+ + + LF G P +
Sbjct: 92 SMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQT 151
Query: 212 YTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEML 271
Y +++ K + + A+ M G P+ FSY+ ++ L K +L DA E EM
Sbjct: 152 YNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMS 211
Query: 272 EAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIE 307
E G +P+VT + L++GF KE+ + A L+E
Sbjct: 212 ERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLE 247
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 87/166 (52%), Gaps = 5/166 (3%)
Query: 161 ADEIFKKMKE-TGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
A E++ ++ E + + PN M+ GL K G V + LK++ M++ ++ Y++++
Sbjct: 238 AMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLI 297
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G A D A+ +F ++ S + +Y ++ G C+C +++++ E ++E +S
Sbjct: 298 HGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLEL-WRIMEHKNS 356
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
N+ ++ L++G + I+EA + + KG+A ++ F++
Sbjct: 357 VNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIH 402
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 76/144 (52%), Gaps = 4/144 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFG-LMREKGTIPEIVIYTA 214
+DA E+F +M E G+ P+ ++DG K+ + A++L+ L+ + P + +
Sbjct: 201 DDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNI 260
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
++ G +K + DD +I+ +M+ N + ++Y+ L+ GLC + A E+ E
Sbjct: 261 MISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERK 320
Query: 275 HSPNVTTFVDLVEGFCKEQGIEEA 298
S +V T+ ++ GFC+ I+E+
Sbjct: 321 ASIDVVTYNTMLGGFCRCGKIKES 344
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 85/183 (46%), Gaps = 8/183 (4%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A I++ M G + + GLC +G V +AL + + G ++ Y ++
Sbjct: 376 DEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASI 435
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++ K + ++A + ++M +G+ N+ L+ GL + SRL +A F EM + G
Sbjct: 436 IDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGC 495
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFL-----NKKKPFSPS 330
P V ++ L+ G CK EA +K ++E G+ + K L ++K +
Sbjct: 496 RPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALE 555
Query: 331 VWE 333
+W
Sbjct: 556 LWH 558
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 77/158 (48%), Gaps = 3/158 (1%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E+A + K+M + G+ N+ A++ GL +D + EA M + G P +V Y +
Sbjct: 446 EEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNIL 505
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ G KA K +A ++M NG P+ +Y++L+ GLC+ ++ A E + L++G
Sbjct: 506 ICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGL 565
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
+V L+ G C +++A + + + N
Sbjct: 566 ETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTAN 603
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 3/135 (2%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A ++M + G P V+ ++ GLCK G EA M E G P++ Y+ ++
Sbjct: 482 EASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILL 541
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G + K D A ++ + +G+ + + +L+ GLC +L DA M +
Sbjct: 542 CGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCT 601
Query: 277 PNVTTFVDLVEGFCK 291
N+ T+ L+EGF K
Sbjct: 602 ANLVTYNTLMEGFFK 616
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 64/129 (49%), Gaps = 3/129 (2%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A E++ + ++GL + + ++ GLC G + +A+ + M + +V Y ++E
Sbjct: 553 ALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLME 612
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G+ K ++ A I+ M G+ P+ SY +++GLC C + A EF + G P
Sbjct: 613 GFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFP 672
Query: 278 NVTTFVDLV 286
V T+ LV
Sbjct: 673 TVYTWNILV 681
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 3/142 (2%)
Query: 160 DADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A K+M E G P+ +L GLC+D + AL+L+ + G +++++ ++
Sbjct: 517 EASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILI 576
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G K DDA + M+ + N +Y L++G K A M + G
Sbjct: 577 HGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQ 636
Query: 277 PNVTTFVDLVEGFCKEQGIEEA 298
P++ ++ +++G C +G+ A
Sbjct: 637 PDIISYNTIMKGLCMCRGVSYA 658
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 1/151 (0%)
Query: 172 GLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRI 231
GL+ + M D L K G + EA L G M+++ P++VIY +V + +A R+
Sbjct: 290 GLVNYGILMSD-LGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRV 348
Query: 232 FRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCK 291
+MQ G PNA +Y +++ G C+ ML + H P TFV +V G K
Sbjct: 349 LTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIK 408
Query: 292 EQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
++ A ++ + +K + A ++ L+
Sbjct: 409 GGNLDHACFVLEVMGKKNLSFGSGAWQNLLS 439
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 3/149 (2%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A + + M + + PNAV ++ GLC G EA KL M +G P +V Y ++
Sbjct: 240 AKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMS 299
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
K + D+AK + +M+ I P+ Y +LV LC R+ +A+ EM G P
Sbjct: 300 DLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKP 359
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLI 306
N T+ +++GFC+ + + + ++
Sbjct: 360 NAATYRMMIDGFCRIEDFDSGLNVLNAML 388
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 3/154 (1%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A ++F +M E + P+ V +++ LC++ + +A L M +K P V + +
Sbjct: 203 EAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLL 262
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++G + ++AK++ M+ G P +Y +L+ L K R+ +A EM +
Sbjct: 263 MKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRI 322
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
P+V + LV C E + EA + + KG
Sbjct: 323 KPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKG 356
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 69/127 (54%), Gaps = 4/127 (3%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A+ +F++M G +P+ V ++DG CK + AL+LF M+ KG +P V Y + +
Sbjct: 266 EANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFI 325
Query: 217 EGYTKAHKADDAKRIFRKMQSNGIS-PNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
Y+ ++ + A + R M+ G P + +YT L+ L + R +A + VEM+EAG
Sbjct: 326 RYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGL 385
Query: 276 SPNVTTF 282
P T+
Sbjct: 386 VPREYTY 392
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 13/156 (8%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
++ L ++G V+EAL F M+E P++ Y ++ + A+ + +MQ
Sbjct: 170 CLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLP 229
Query: 239 GIS--PNAFSYTVLVQGLCK------CS-----RLQDAFEFCVEMLEAGHSPNVTTFVDL 285
G P+ ++YT+L+ C+ C R+ +A EML G P+V T+ L
Sbjct: 230 GFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCL 289
Query: 286 VEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFL 321
++G CK I A + + KG N+ F+
Sbjct: 290 IDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFI 325
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 76/170 (44%), Gaps = 16/170 (9%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKG--TIPEIVIYT 213
++A F +MKE P+ A +++ LC+ G ++A L M+ G P+ YT
Sbjct: 182 KEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYT 241
Query: 214 AVVEGYTKA-----------HKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQD 262
++ Y + + +A R+FR+M G P+ +Y L+ G CK +R+
Sbjct: 242 ILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGR 301
Query: 263 AFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAV 312
A E +M G PN T+ + + IE A ++T+ + G V
Sbjct: 302 ALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGV 351
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 77/141 (54%), Gaps = 3/141 (2%)
Query: 161 ADEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A E+ ++M + G+ N + + LD LCK+ + EA L ++G I + V Y ++
Sbjct: 435 ALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIM 494
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G+ + K + A ++ +M+ I+P ++ L+ GLC + + A E E+ E+G P
Sbjct: 495 GFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLP 554
Query: 278 NVTTFVDLVEGFCKEQGIEEA 298
+ +TF ++ G+CKE +E+A
Sbjct: 555 DDSTFNSIILGYCKEGRVEKA 575
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 71/141 (50%), Gaps = 4/141 (2%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTI-PEIVIYTAVV 216
A E+F M + G+ N +++G C +G +++AL + M + + P+ V Y ++
Sbjct: 188 AREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTIL 247
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+ +K + D K + M+ NG+ PN +Y LV G CK L++AF+ M +
Sbjct: 248 KAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVL 307
Query: 277 PNVTTFVDLVEGFCKEQGIEE 297
P++ T+ L+ G C + E
Sbjct: 308 PDLCTYNILINGLCNAGSMRE 328
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 92/168 (54%), Gaps = 4/168 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A +I + MK+T ++P+ +++GLC G ++E L+L M+ P++V Y +
Sbjct: 292 KEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTL 351
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA-G 274
++G + + +A+++ +M+++G+ N ++ + ++ LCK + + E+++ G
Sbjct: 352 IDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHG 411
Query: 275 HSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
SP++ T+ L++ + K + A ++ + +KG +N + L+
Sbjct: 412 FSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILD 459
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 78/155 (50%), Gaps = 4/155 (2%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A E++ +MK+ + P +++ GLC G + A++ F + E G +P+ + ++
Sbjct: 503 EKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSI 562
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ GY K + + A + + + P+ ++ +L+ GLCK + A F ++E
Sbjct: 563 ILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEERE 622
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
V T+ ++ FCK++ ++EA + + EKG
Sbjct: 623 VDTV-TYNTMISAFCKDKKLKEAYDLLSEMEEKGL 656
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 4/156 (2%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
D E+ MK+ GL+PN V ++ G CK G ++EA ++ LM++ +P++ Y ++
Sbjct: 258 DLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILI 317
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G A + + M+S + P+ +Y L+ G + +A + +M G
Sbjct: 318 NGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVK 377
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIE-KGFA 311
N T ++ CKE+ E +K L++ GF+
Sbjct: 378 ANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFS 413
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 78/161 (48%), Gaps = 6/161 (3%)
Query: 159 EDADEIFKKM-KETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 214
EDA + ++M E + P+ V +L + K G + + +L M++ G +P V Y
Sbjct: 221 EDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNN 280
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
+V GY K +A +I M+ + P+ +Y +L+ GLC +++ E M
Sbjct: 281 LVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLK 340
Query: 275 HSPNVTTFVDLVEGFCKEQGIE-EAKGAIKTLIEKGFAVNE 314
P+V T+ L++G C E G+ EA+ ++ + G N+
Sbjct: 341 LQPDVVTYNTLIDG-CFELGLSLEARKLMEQMENDGVKANQ 380
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 74/148 (50%), Gaps = 7/148 (4%)
Query: 158 PEDADEIFKKMKETGLIPNAVA---MLDGLCK---DGLVQEALKLFGLMREKGTIPEIVI 211
P A +IF+KM L PN + +L GL + + A ++F M + G +
Sbjct: 147 PHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQT 206
Query: 212 YTAVVEGYTKAHKADDAKRIFRKMQSN-GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 270
+ +V GY K +DA + +M S ++P+ +Y +++ + K RL D E ++M
Sbjct: 207 FNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDM 266
Query: 271 LEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
+ G PN T+ +LV G+CK ++EA
Sbjct: 267 KKNGLVPNRVTYNNLVYGYCKLGSLKEA 294
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 88/213 (41%), Gaps = 15/213 (7%)
Query: 111 RPDVANQLGDSFLDK-FKLGFDNKAGNSSETNQSE-----EATKSSNSNQPAMPEDADEI 164
+PDV ++ +D F+LG +A E +++ + T + + E + +
Sbjct: 342 QPDVVTY--NTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAV 399
Query: 165 FKKMKET----GLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
+K+KE G P+ V ++ K G + AL++ M +KG + +++
Sbjct: 400 TRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILD 459
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
K K D+A + G + +Y L+ G + +++ A E EM + +P
Sbjct: 460 ALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITP 519
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
V+TF L+ G C E A L E G
Sbjct: 520 TVSTFNSLIGGLCHHGKTELAMEKFDELAESGL 552
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 207 PEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSR---LQDA 263
P ++ + Y K A +IF+KM + PN + L+ GL + + A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 264 FEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
E +M++ G S NV TF LV G+C E +E+A G ++ ++ + F VN
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSE-FKVN 237
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 81/154 (52%), Gaps = 7/154 (4%)
Query: 152 SNQPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPE 208
NQ + ++A + +K E + + VA ++ G + A L M G P+
Sbjct: 140 CNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPD 199
Query: 209 IVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCV 268
++ YT+++ GY A K DDA R+ ++M + N+ +Y+ +++G+CK ++ A E
Sbjct: 200 VITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLA 259
Query: 269 EM-LEAGH---SPNVTTFVDLVEGFCKEQGIEEA 298
EM E G SPN T+ +++ FC+++ +EEA
Sbjct: 260 EMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEA 293
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
AD + K+M GL P+ + +M++G C G + +A +L M + + V Y+ ++E
Sbjct: 184 ADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILE 243
Query: 218 GYTKAHKADDAKRIFRKMQSNG----ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 273
G K+ + A + +M+ ISPNA +YT+++Q C+ R+++A M
Sbjct: 244 GVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNR 303
Query: 274 GHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
G PN T L++G + +E A+ LI+K
Sbjct: 304 GCMPNRVTACVLIQGVLEN---DEDVKALSKLIDK 335
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 86/180 (47%), Gaps = 5/180 (2%)
Query: 136 NSSETNQSEEATKSSNSNQPAMPEDADEIFKKMKE-TGLIPNAVA---MLDGLCKDGLVQ 191
N T +S A S+ N + E A + FK++ E G+ P+ V M+ LC+ G +
Sbjct: 152 NCERTVKSFNALLSAYVNSKKLDE-AMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMD 210
Query: 192 EALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLV 251
+ L +F + + G P+++ + ++E + + + RI+ M+S +SPN SY V
Sbjct: 211 DILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRV 270
Query: 252 QGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
+GL + + DA M G SP+V T+ L+ + + +EE + EKG
Sbjct: 271 RGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLT 330
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 87/182 (47%), Gaps = 14/182 (7%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+D IF+++++ G P+ ++ +L+ + L E +++ LM+ K P I Y +
Sbjct: 210 DDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSR 269
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
V G T+ K DA + M++ GISP+ +Y L+ + L++ + EM E G
Sbjct: 270 VRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGL 329
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLNKKKPFSPSVWEAI 335
+P+ T+ L+ CK KG + +E V+E+A+K L + V E +
Sbjct: 330 TPDTVTYCMLIPLLCK-------KGDLDRAVE----VSEEAIKHKLLSRPNMYKPVVERL 378
Query: 336 FG 337
G
Sbjct: 379 MG 380
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 69/147 (46%), Gaps = 3/147 (2%)
Query: 160 DADEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+ D I+ MK L PN + + GL ++ +AL L +M+ +G P++ Y A++
Sbjct: 246 EGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALI 305
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
Y + ++ + + +M+ G++P+ +Y +L+ LCK L A E E ++
Sbjct: 306 TAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLL 365
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIK 303
+ +VE I+EA +K
Sbjct: 366 SRPNMYKPVVERLMGAGKIDEATQLVK 392
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Query: 188 GLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKM-QSNGISPNAFS 246
G+ + A KLF M E + + A++ Y + K D+A + F+++ + GI+P+ +
Sbjct: 136 GMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVT 195
Query: 247 YTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQ 293
Y +++ LC+ + D E+ + G P++ +F L+E F + +
Sbjct: 196 YNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRE 242
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 8/159 (5%)
Query: 157 MPEDADEIFKKMKETGLIP---NAVAMLDGLCKD-GLVQEALKLFGLMREKGTIPEIVIY 212
+PE F KM E P + +LD L G +Q+A +LF R G +P Y
Sbjct: 134 LPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSY 193
Query: 213 TAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 272
+++ + A ++F KM + P+ SY +L+QG C+ ++ A E +ML
Sbjct: 194 NLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLN 253
Query: 273 AGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
G P+ T L+ G C + +E K ++ +I KGF+
Sbjct: 254 KGFVPDRT----LIGGLCDQGMFDEGKKYLEEMISKGFS 288
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 78/154 (50%), Gaps = 7/154 (4%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+ A E+FK + G++PN + ++ C + + A +LFG M E+ +P++ Y +
Sbjct: 172 QKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKIL 231
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++G+ + + + A + M + G P+ L+ GLC + ++ EM+ G
Sbjct: 232 IQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGF 287
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
SP+ + LV+GFC +EEA ++ +++ G
Sbjct: 288 SPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 321
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 82/170 (48%), Gaps = 8/170 (4%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A ++F KM E ++P+ + ++ G C+ G V A++L M KG +P+ ++
Sbjct: 209 AYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIG 264
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G D+ K+ +M S G SP+ LV+G C ++++A + +++ G +
Sbjct: 265 GLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETL 324
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFL-NKKKP 326
+ T+ ++ C E E+ K ++ +++ + + V + NKK P
Sbjct: 325 HSDTWEMVIPLICNEDESEKIKLFLEDAVKEEITGDTRIVDVGIENKKMP 374
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 68/128 (53%), Gaps = 3/128 (2%)
Query: 179 AMLDGLCKDGLVQEA---LKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKM 235
+LD LCK+G V+EA L+ G + +P + I+ ++ G+ ++ K A++++ +M
Sbjct: 217 VLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEM 276
Query: 236 QSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGI 295
++ + P +Y L++G C+ R+Q A E EM A N F +++G + +
Sbjct: 277 KAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRL 336
Query: 296 EEAKGAIK 303
EA G ++
Sbjct: 337 SEALGMME 344
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A E+ ++MK + N + ++DGL + G + EAL + + P IV Y ++V+
Sbjct: 304 AMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVK 363
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
+ KA A +I + M + G+ P +Y + K ++ ++ +++EAGHSP
Sbjct: 364 NFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSP 423
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
+ T+ +++ C++ + A K + +G
Sbjct: 424 DRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGI 456
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 64/132 (48%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
+++ CK G + A K+ +M +G P Y + ++K +K ++ ++ K+
Sbjct: 360 SLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEA 419
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
G SP+ +Y ++++ LC+ +L A + EM G P++ T L+ C+ + +EEA
Sbjct: 420 GHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEA 479
Query: 299 KGAIKTLIEKGF 310
+ +G
Sbjct: 480 FEEFDNAVRRGI 491
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 67/152 (44%), Gaps = 3/152 (1%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A++++++MK + P V +++G C+ VQ A+++ M+ +++ +++
Sbjct: 269 AEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIID 328
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G +A + +A + + P +Y LV+ CK L A + M+ G P
Sbjct: 329 GLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDP 388
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
TT+ + F K EE LIE G
Sbjct: 389 TTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAG 420
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 69/149 (46%), Gaps = 4/149 (2%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A +I K M G+ P K +E + L+ + E G P+ + Y +++
Sbjct: 374 ASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILK 433
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
+ K A ++ ++M++ GI P+ + T+L+ LC+ L++AFE + G P
Sbjct: 434 MLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIP 493
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLI 306
TF +++ + +G+ + + +L+
Sbjct: 494 QYITF-KMIDNGLRSKGMSDMAKRLSSLM 521
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 62/130 (47%)
Query: 180 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 239
M+ C+ G + + M KG P + ++ G+ K+D+ ++ M+ G
Sbjct: 193 MIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRG 252
Query: 240 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAK 299
++ +Y + +Q LCK + ++A ML AG PN T+ L+ GFC E EEAK
Sbjct: 253 VNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAK 312
Query: 300 GAIKTLIEKG 309
K ++ +G
Sbjct: 313 KLFKIMVNRG 322
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%)
Query: 181 LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGI 240
+ LCK +EA L M G P V Y+ ++ G+ ++AK++F+ M + G
Sbjct: 264 IQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGC 323
Query: 241 SPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKG 300
P++ Y L+ LCK + A C E +E P+ + LV G K+ +EEAK
Sbjct: 324 KPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKE 383
Query: 301 AIKTLIEK 308
I + EK
Sbjct: 384 LIGQVKEK 391
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 3/162 (1%)
Query: 164 IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
I +M+ G+ PN+ + M+ G + E K+ +M+++G + Y ++
Sbjct: 209 IVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLC 268
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
K K+ +AK + M S G+ PN +Y+ L+ G C ++A + M+ G P+
Sbjct: 269 KRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSE 328
Query: 281 TFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
+ L+ CK E A K +EK + + +K +N
Sbjct: 329 CYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVN 370
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 81/155 (52%), Gaps = 3/155 (1%)
Query: 159 EDADEIFKKMKET-GLIPNAV--AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A+E+FK++KE G + + V M+ K G + EA+ LF M+ +G+ P++ Y A+
Sbjct: 461 EAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNAL 520
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ G KA ++A + RKM+ NG + S+ +++ G + + A E + +G
Sbjct: 521 MSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGI 580
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
P+ T+ L+ F EEA ++ + +KGF
Sbjct: 581 KPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGF 615
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 82/158 (51%), Gaps = 3/158 (1%)
Query: 166 KKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKG-TIPEIVIYTAVVEGYTKAHK 224
+K K T N+V ++ L ++G ++ +++ M +G P+ + Y+A++ Y K +
Sbjct: 191 RKCKPTSSTYNSVILM--LMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGR 248
Query: 225 ADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVD 284
D A R+F +M+ N + P YT L+ K +++ A + EM AG SP V T+ +
Sbjct: 249 NDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTE 308
Query: 285 LVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
L++G K ++EA G K ++ G + + + +N
Sbjct: 309 LIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMN 346
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 74/148 (50%), Gaps = 3/148 (2%)
Query: 165 FKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTK 221
F KMK + P+ ++DG CK V++AL L M EKG P Y +++ K
Sbjct: 397 FDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGK 456
Query: 222 AHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTT 281
A + + A +F++++ N + ++ Y V+++ KC +L +A + EM G P+V
Sbjct: 457 AKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYA 516
Query: 282 FVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
+ L+ G K I EA ++ + E G
Sbjct: 517 YNALMSGMVKAGMINEANSLLRKMEENG 544
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 74/148 (50%), Gaps = 4/148 (2%)
Query: 154 QPAMPEDADEIFKKMKETG-LIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEI 209
Q E E++ +M G P+ + A++ K G A++LF M++ P
Sbjct: 209 QEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTE 268
Query: 210 VIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVE 269
IYT ++ Y K K + A +F +M+ G SP ++YT L++GL K R+ +A+ F +
Sbjct: 269 KIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKD 328
Query: 270 MLEAGHSPNVTTFVDLVEGFCKEQGIEE 297
ML G +P+V +L+ K +EE
Sbjct: 329 MLRDGLTPDVVFLNNLMNILGKVGRVEE 356
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 76/189 (40%), Gaps = 41/189 (21%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVI---- 211
E A ++F++MK G P ++ GL K G V EA + M G P++V
Sbjct: 285 EKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNL 344
Query: 212 -------------------------------YTAVVEGY--TKAHKADDAKRIFRKMQSN 238
Y V++ +KAH + F KM+++
Sbjct: 345 MNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAH-VSEVSSWFDKMKAD 403
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
+SP+ F+Y++L+ G CK +R++ A EM E G P + L+ K + E A
Sbjct: 404 SVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAA 463
Query: 299 KGAIKTLIE 307
K L E
Sbjct: 464 NELFKELKE 472
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 84/191 (43%), Gaps = 39/191 (20%)
Query: 159 EDADEIFKKMKETGLIPN---AVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+ A +F +MK+ + P +L K G V++AL LF M+ G P + YT +
Sbjct: 250 DSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTEL 309
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM----- 270
++G KA + D+A ++ M +G++P+ L+ L K R+++ EM
Sbjct: 310 IKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRC 369
Query: 271 ----------LEA-----GHSPNVTTFVD----------------LVEGFCKEQGIEEAK 299
++A H V+++ D L++G+CK +E+A
Sbjct: 370 TPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKAL 429
Query: 300 GAIKTLIEKGF 310
++ + EKGF
Sbjct: 430 LLLEEMDEKGF 440
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 61/132 (46%), Gaps = 3/132 (2%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A ++F +MK G P+ A ++ G+ K G++ EA L M E G +I + ++
Sbjct: 497 EAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIIL 556
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G+ + A +F ++ +GI P+ +Y L+ ++A EM + G
Sbjct: 557 NGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFE 616
Query: 277 PNVTTFVDLVEG 288
+ T+ +++
Sbjct: 617 YDAITYSSILDA 628
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 1/159 (0%)
Query: 151 NSNQPAMPEDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIV 210
N N P + +++ KK K + + ++L C+ G EA LF RE + V
Sbjct: 339 NMNIPKAVDVFNKMLKKRKRINCVIVS-SILQCYCQMGNFSEAYDLFKEFRETNISLDRV 397
Query: 211 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 270
Y + K K ++A +FR+M GI+P+ +YT L+ G C + DAF+ +EM
Sbjct: 398 CYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEM 457
Query: 271 LEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
G +P++ + L G +EA +K + +G
Sbjct: 458 DGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRG 496
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 75/150 (50%), Gaps = 10/150 (6%)
Query: 164 IFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
+FK MK ++P+ V +L + L +E M+ P++ YT +++
Sbjct: 720 LFKDMKRREIVPDVVTYTVLLKNKPERNLSRE-------MKAFDVKPDVFYYTVLIDWQC 772
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
K +AKRIF +M +G+ P+A YT L+ CK L++A M+E+G P+V
Sbjct: 773 KIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVV 832
Query: 281 TFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
+ L+ G C+ + +A +K ++EKG
Sbjct: 833 PYTALIAGCCRNGFVLKAVKLVKEMLEKGI 862
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 16/193 (8%)
Query: 160 DADEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A ++FK+ +ET + + V D L K G V+EA++LF M KG P+++ YT ++
Sbjct: 379 EAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLI 438
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G K DA + +M G +P+ Y VL GL Q+AFE M G
Sbjct: 439 GGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVK 498
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTL----------IEKGFAVN---EKAVKDFLNK 323
P T ++EG +++A+ ++L + KGF + A + F+
Sbjct: 499 PTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRL 558
Query: 324 KKPFSPSVWEAIF 336
+ P SV+ +F
Sbjct: 559 EFPLPKSVYFTLF 571
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
++D CK G + EA ++F M E G P+ YTA++ K +AK IF +M +
Sbjct: 766 VLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIES 825
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPN 278
G+ P+ YT L+ G C+ + A + EMLE G P
Sbjct: 826 GVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPT 865
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 72/143 (50%), Gaps = 3/143 (2%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
EDA+ + M++ G+ P+ A+++G K+ + +A+ +F M +K VI +++
Sbjct: 308 EDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSI 367
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++ Y + +A +F++ + IS + Y V L K ++++A E EM G
Sbjct: 368 LQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGI 427
Query: 276 SPNVTTFVDLVEGFCKEQGIEEA 298
+P+V + L+ G C + +A
Sbjct: 428 APDVINYTTLIGGCCLQGKCSDA 450
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 160 DADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A IF +M E+G+ P+A A++ CK G ++EA +F M E G P++V YTA++
Sbjct: 779 EAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALI 838
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPN 243
G + A ++ ++M GI P
Sbjct: 839 AGCCRNGFVLKAVKLVKEMLEKGIKPT 865
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 70/135 (51%), Gaps = 3/135 (2%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A I M+E GL P +++ L K G V EA + F M E G P+ + Y ++
Sbjct: 566 AFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMIN 625
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
Y + + D+A + ++ + + P++F+YTVL+ G K ++ ++ +MLE G SP
Sbjct: 626 TYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSP 685
Query: 278 NVTTFVDLVEGFCKE 292
NV + L+ F K+
Sbjct: 686 NVVLYTALIGHFLKK 700
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 76/148 (51%), Gaps = 7/148 (4%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A E+ K+K++ +IPN ++ G C G + EA M+++G +P +V YT +++
Sbjct: 779 AMEVIGKVKKS-IIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMK 837
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
+ +A + A +F + P+ Y+ L++GLC R DA +EM ++G +P
Sbjct: 838 SHIEAGDIESAIDLF---EGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINP 894
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTL 305
N ++ L++ C + EA +K +
Sbjct: 895 NKDSYEKLLQCLCYSRLTMEAVKVVKDM 922
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 78/163 (47%), Gaps = 3/163 (1%)
Query: 154 QPAMPEDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIV 210
Q + ED + ++E +P+ + +++ LCK A + M E G P +
Sbjct: 524 QENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVA 583
Query: 211 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 270
IY++++ K + +A+ F KM +GI P+ +Y +++ + R+ +A E E+
Sbjct: 584 IYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEV 643
Query: 271 LEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
++ P+ T+ L+ GF K +E+ + ++E G + N
Sbjct: 644 VKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPN 686
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 97/225 (43%), Gaps = 20/225 (8%)
Query: 109 RNRPDVA--NQLGDSFLDKFKLGFDNKAGNSSETNQSEEATKSSNSNQPAMPEDADEIFK 166
R +P V+ + LG+ F + K S N T + ++A +
Sbjct: 759 RTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLE 818
Query: 167 KMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTI--PEIVIYTAVVEGYTK 221
M++ G++PN V ++ + G ++ A+ LF +GT P+ V+Y+ +++G
Sbjct: 819 SMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLF-----EGTNCEPDQVMYSTLLKGLCD 873
Query: 222 AHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTT 281
+ DA + +MQ +GI+PN SY L+Q LC +A + +M P
Sbjct: 874 FKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSIN 933
Query: 282 FVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLNKKKP 326
L+ C+E+ + EA+ +++ G + LN KP
Sbjct: 934 HTWLIYILCEEKKLREARALFAIMVQSG--------RSLLNCTKP 970
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 1/144 (0%)
Query: 180 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIF-RKMQSN 238
++ G K G++ + +F M +KG + Y ++ Y K D A R+F S
Sbjct: 313 LIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSE 372
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
IS N YT L+ G K + A + + ML+ G P+ T+ L++ K ++ A
Sbjct: 373 DISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYA 432
Query: 299 KGAIKTLIEKGFAVNEKAVKDFLN 322
++++++ G +N + D N
Sbjct: 433 MVILQSILDNGCGINPPVIDDLGN 456
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 63/155 (40%), Gaps = 20/155 (12%)
Query: 164 IFKKMKETGLIPNAVAMLDGLC--------------------KDGLVQEALKLFGLMREK 203
+FK + G + A+ MLD LC K G EA LF M
Sbjct: 207 LFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVD 266
Query: 204 GTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDA 263
G + V+YT +++ Y K + A R++ +M + + L+ G K L
Sbjct: 267 GYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKG 326
Query: 264 FEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
+M++ G NV T+ ++ +CKE ++ A
Sbjct: 327 RVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYA 361
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A+E F KM E+G+ P+ +A M++ ++G + EA +L + + P YT ++
Sbjct: 600 EAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLI 659
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLV 251
G+ K + + KM +G+SPN YT L+
Sbjct: 660 SGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALI 694
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 8/135 (5%)
Query: 157 MPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGT---IPEIV 210
M + +F +M + G+ N M+ CK+G V AL+LF + G+ +
Sbjct: 322 MLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLF--VNNTGSEDISRNVH 379
Query: 211 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 270
YT ++ G+ K D A + +M NGI P+ +Y VL++ L KC L+ A +
Sbjct: 380 CYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSI 439
Query: 271 LEAGHSPNVTTFVDL 285
L+ G N DL
Sbjct: 440 LDNGCGINPPVIDDL 454
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 82/177 (46%), Gaps = 15/177 (8%)
Query: 165 FKKMKETGLIP---NAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTK 221
+KM G P + +++ L ++ ++++ L +++E +P++ Y VV K
Sbjct: 500 IEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCK 559
Query: 222 AHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTT 281
+ D A I M+ G+ P Y+ ++ L K R+ +A E +MLE+G P+
Sbjct: 560 KNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIA 619
Query: 282 FVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLNKKKPFSPSVWEAIFGK 338
++ ++ + + I+EA + E+ VK FL + F+ +V + F K
Sbjct: 620 YMIMINTYARNGRIDEANELV-----------EEVVKHFL-RPSSFTYTVLISGFVK 664
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 7/173 (4%)
Query: 159 EDADEIFKKMKE-TGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 214
E + I+++M+E G PN + +++ C GL+ EA K++ M+ +G + +IV Y
Sbjct: 262 EMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNT 321
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
++ G + AK +FR M GI +Y LV G CK + EM G
Sbjct: 322 MIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKG 381
Query: 275 HSPNVTTFVDLVEGFCKE---QGIEEAKGAIKTLIEKGFAVNEKAVKDFLNKK 324
+ T LVEG C + Q + EA +K + + + + L K+
Sbjct: 382 FEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKR 434
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 89/173 (51%), Gaps = 7/173 (4%)
Query: 157 MPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 213
+ +A++++++MK G++ + VA M+ GLC + V +A +LF M KG + Y
Sbjct: 296 LMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYE 355
Query: 214 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCK---CSRLQDAFEFCVEM 270
+V GY KA D ++R+M+ G + + LV+GLC R+ +A + +
Sbjct: 356 HLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDA 415
Query: 271 L-EAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
+ EA P+ + LV+ C++ ++ A ++ KGF +++ + F++
Sbjct: 416 VREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFID 468
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 77/156 (49%), Gaps = 6/156 (3%)
Query: 158 PEDADEIFKKMKETGLIP---NAVAMLDGLCKDGLVQEALKLFGLMREKG---TIPEIVI 211
P+ A ++ ++M E G P A +D C+ G+V EA LF M KG + P
Sbjct: 284 PKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKT 343
Query: 212 YTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEML 271
+ ++ K KA++ + +M S G P+ +Y +++G+C ++ +A++F EM
Sbjct: 344 FALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMS 403
Query: 272 EAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIE 307
G+ P++ T+ + C+ + +EA ++E
Sbjct: 404 NKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVE 439
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 75/168 (44%), Gaps = 37/168 (22%)
Query: 180 MLDGLCKDGLVQE----------------------------------ALKLFGLMREKGT 205
+LD LCK GLV+E A+KL M E G
Sbjct: 240 LLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGH 299
Query: 206 IPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGIS---PNAFSYTVLVQGLCKCSRLQD 262
PE Y A ++ + +A D+A +F M + G + P A ++ +++ L K + ++
Sbjct: 300 KPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEE 359
Query: 263 AFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
FE M+ G P+V+T+ D++EG C + ++EA + + KG+
Sbjct: 360 CFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGY 407
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 77/160 (48%), Gaps = 9/160 (5%)
Query: 154 QPAMPEDADEIFKKMKETGLIPNA------VAMLDGLCKDGLVQEALKLFGLMREKGTIP 207
Q M ++A ++F M G +A M+ L K+ +E +L G M G +P
Sbjct: 315 QAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLP 374
Query: 208 EIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFC 267
++ Y V+EG A K D+A + +M + G P+ +Y ++ LC+ + +A +
Sbjct: 375 DVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLY 434
Query: 268 VEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIE 307
M+E+ +P+V T+ L+ F + +++ GA T E
Sbjct: 435 GRMVESRCAPSVQTYNMLISMFFE---MDDPDGAFNTWTE 471
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Query: 205 TIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAF 264
T PEI + +++ K + + + R+M+ + + P+A ++ VL G C+ + A
Sbjct: 230 TQPEINAFNMLLDALCKCGLVKEGEALLRRMR-HRVKPDANTFNVLFFGWCRVRDPKKAM 288
Query: 265 EFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDF 320
+ EM+EAGH P T+ ++ FC+ ++EA +I KG AV+ K F
Sbjct: 289 KLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTF 344
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 76/168 (45%), Gaps = 3/168 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E+ E+ +M TG +P+ +++G+C V EA K M KG P+IV Y
Sbjct: 358 EECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCF 417
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ + K D+A +++ +M + +P+ +Y +L+ + AF EM +
Sbjct: 418 LRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDC 477
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLNK 323
+V T+ ++ G +EA ++ ++ KG + + FL +
Sbjct: 478 VQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMR 525
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 13/165 (7%)
Query: 122 FLDKFKLGFDNKAGNSSETNQSEEATKSSNSNQPAMPEDADEIFKKMKETGLIPNAVA-- 179
F +K K FD K+ N + N P +A+ ++ +M G+ + V+
Sbjct: 256 FCNKDKYPFDAKSFN---------IVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYS 306
Query: 180 -MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKM-QS 237
M+ K G + + LKLF M+++ P+ +Y AVV KA +A+ + + M +
Sbjct: 307 SMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEE 366
Query: 238 NGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTF 282
GI PN +Y L++ LCK + ++A + EMLE G P + T+
Sbjct: 367 KGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTY 411
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 67/133 (50%), Gaps = 2/133 (1%)
Query: 180 MLDGLCK-DGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
+L+G C G +EA +++ M G ++V Y++++ Y+K + ++F +M+
Sbjct: 272 VLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKE 331
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM-LEAGHSPNVTTFVDLVEGFCKEQGIEE 297
I P+ Y +V L K S + +A M E G PNV T+ L++ CK + EE
Sbjct: 332 CIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEE 391
Query: 298 AKGAIKTLIEKGF 310
AK ++EKG
Sbjct: 392 AKQVFDEMLEKGL 404
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 72/151 (47%), Gaps = 10/151 (6%)
Query: 159 EDADEIFKKMKETGLIPN--AVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
E+A ++F +M E GL P + + G +E +L MR+ G P + Y ++
Sbjct: 390 EEAKQVFDEMLEKGLFPTIRTYHAFMRILRTG--EEVFELLAKMRKMGCEPTVETYIMLI 447
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+ D+ ++ +M+ + P+ SY V++ GL ++++A+ + EM + G
Sbjct: 448 RKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMR 507
Query: 277 PNVTTFVDLVEGF-----CKEQGIEEAKGAI 302
PN D+++ + EQ I ++KG +
Sbjct: 508 PN-ENVEDMIQSWFSGKQYAEQRITDSKGEV 537
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 83/164 (50%), Gaps = 4/164 (2%)
Query: 161 ADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A E+F+ M++ P++ +L+G K+ + +A ++F M + G P+IV Y+ +V+
Sbjct: 222 AQEVFENMRDR-FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVD 280
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
KA + D+A I R M + P F Y+VLV +RL++A + +EM +G
Sbjct: 281 ILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKA 340
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFL 321
+V F L+ FCK ++ +K + KG N K+ L
Sbjct: 341 DVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIIL 384
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 93/194 (47%), Gaps = 40/194 (20%)
Query: 154 QPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKL-------------- 196
+P +P+ A E+F++M + G P+ V M+D LCK G V EAL +
Sbjct: 250 EPNLPK-AREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTF 308
Query: 197 ---------------------FGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKM 235
F M G ++ ++ +++ + KA++ + R+ ++M
Sbjct: 309 IYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEM 368
Query: 236 QSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGI 295
+S G++PN+ S ++++ L + +AF+ +M++ P+ T+ +++ FC+++ +
Sbjct: 369 KSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCE-PDADTYTMVIKMFCEKKEM 427
Query: 296 EEAKGAIKTLIEKG 309
E A K + +KG
Sbjct: 428 ETADKVWKYMRKKG 441
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 9/155 (5%)
Query: 164 IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
+ K+MK G+ PN+ + +L L + G EA +F M K P+ YT V++ +
Sbjct: 364 VLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM-IKVCEPDADTYTMVIKMFC 422
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
+ + + A ++++ M+ G+ P+ +++VL+ GLC+ Q A EM+E G P+
Sbjct: 423 EKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGV 482
Query: 281 TFVDLVEGFCKEQGIEEAKGAIKTLIEK-GFAVNE 314
TF L + K EE + +K L EK VNE
Sbjct: 483 TFGRLRQLLIK----EEREDVLKFLNEKMNVLVNE 513
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 78/155 (50%), Gaps = 4/155 (2%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E+A + F +M+ +G+ + +++ CK ++ ++ M+ KG P +
Sbjct: 324 EEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNII 383
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ + + D+A +FRKM P+A +YT++++ C+ ++ A + M + G
Sbjct: 384 LRHLIERGEKDEAFDVFRKM-IKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGV 442
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
P++ TF L+ G C+E+ ++A ++ +IE G
Sbjct: 443 FPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGI 477
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 2/114 (1%)
Query: 196 LFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLC 255
L MR+K + + + V+ Y +A K D+A F M+ + PN ++ L+ LC
Sbjct: 156 LINAMRKKKML-NVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALC 214
Query: 256 KCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
K ++ A E E + +P+ T+ L+EG+ KE + +A+ + +I+ G
Sbjct: 215 KSKNVRKAQEV-FENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAG 267
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 81/163 (49%), Gaps = 7/163 (4%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E+A +F++M + G+ P A +LD G+V++A +F MR P++ YT +
Sbjct: 331 EEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTM 390
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ Y A + A++ F++++ +G PN +Y L++G K + ++ E +M +G
Sbjct: 391 LSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGI 450
Query: 276 SPNVTTFVDLVE--GFCKEQGIEEAKGAIKTLIEKGFAVNEKA 316
N T +++ G CK G A G K + G ++KA
Sbjct: 451 KANQTILTTIMDASGRCKNFG--SALGWYKEMESCGVPPDQKA 491
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 73/135 (54%), Gaps = 3/135 (2%)
Query: 178 VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQS 237
+ ++ K G A ++ ++ + G+ P ++ YTA++E Y + K ++A+ IFR+MQS
Sbjct: 143 LMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQS 202
Query: 238 NGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS---PNVTTFVDLVEGFCKEQG 294
+G P+A +Y ++++ + + ++A E +L+ S P+ + ++ + K
Sbjct: 203 SGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGN 262
Query: 295 IEEAKGAIKTLIEKG 309
E+A+ +++ KG
Sbjct: 263 YEKARKVFSSMVGKG 277
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 79/153 (51%), Gaps = 9/153 (5%)
Query: 159 EDADEIFKKM---KETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIY 212
++A+E+F+ + K++ L P+ M+ K G ++A K+F M KG V Y
Sbjct: 226 KEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTY 285
Query: 213 TAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 272
+++ + ++K + +I+ +MQ + I P+ SY +L++ + R ++A EML+
Sbjct: 286 NSLM-SFETSYK--EVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLD 342
Query: 273 AGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTL 305
AG P + L++ F +E+AK K++
Sbjct: 343 AGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM 375
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 3/147 (2%)
Query: 156 AMPEDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIY 212
M E A +FK M+ + P+ ML ++ A K F ++ G P IV Y
Sbjct: 363 GMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTY 422
Query: 213 TAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 272
+++GY KA+ + ++ KM+ +GI N T ++ +C A + EM
Sbjct: 423 GTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMES 482
Query: 273 AGHSPNVTTFVDLVEGFCKEQGIEEAK 299
G P+ L+ + +EEAK
Sbjct: 483 CGVPPDQKAKNVLLSLASTQDELEEAK 509
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 60/112 (53%)
Query: 200 MREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSR 259
M+ G IP+ + +++ Y K + D+A R+F++M G PNA++Y+ LV+G+C+ R
Sbjct: 214 MKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGR 273
Query: 260 LQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
+ F EM G PN + ++ L+ E+ ++EA + ++ +
Sbjct: 274 VGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLS 325
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 3/129 (2%)
Query: 166 KKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKA 222
K+MK G+IP+ + + K V EA+++F M G+ P Y+ +V+G +
Sbjct: 212 KQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEK 271
Query: 223 HKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTF 282
+ +++MQ G+ PN Y VL+ L RL +A E +ML SP++ T+
Sbjct: 272 GRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTY 331
Query: 283 VDLVEGFCK 291
++ C+
Sbjct: 332 NTVLTELCR 340
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A +FK+M G PNA ++ G+C+ G V + L + M+ KG +P Y +
Sbjct: 240 DEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVL 299
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVE 269
+ + + D+A + M +N +SP+ +Y ++ LC+ R +A E E
Sbjct: 300 ICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEE 353
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%)
Query: 228 AKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVE 287
+ + ++M+SNG+ P+ F ++++ KC + +A EM G PN T+ LV+
Sbjct: 207 VRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVK 266
Query: 288 GFCKEQGIEEAKGAIKTLIEKGFAVN 313
G C++ + + G K + KG N
Sbjct: 267 GVCEKGRVGQGLGFYKEMQVKGMVPN 292
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 79/163 (48%), Gaps = 4/163 (2%)
Query: 152 SNQPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKL-FGLMREKGTIP 207
+Q +DA ++F +M + + P V ++ GLCKD V+EALK+ +++ G P
Sbjct: 162 CSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRP 221
Query: 208 EIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFC 267
+ IY ++++ + + A ++ + I +A Y+ L+ L K R +
Sbjct: 222 TVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMIL 281
Query: 268 VEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
EM E G P+ T+ L+ GFC E E A + ++EKG
Sbjct: 282 EEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGL 324
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 80/167 (47%), Gaps = 10/167 (5%)
Query: 148 KSSNSNQPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKG 204
K+ SN+ +M I ++M E G P+ V +++G C + + A ++ M EKG
Sbjct: 270 KAGRSNEVSM------ILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKG 323
Query: 205 TIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAF 264
P+++ Y ++ + + K ++A +F M G SP+ SY ++ GLC+ + ++A
Sbjct: 324 LKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAA 383
Query: 265 EFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
EML G+ P ++ C+ +E I +L +G A
Sbjct: 384 VILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSL-HRGIA 429
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 68/145 (46%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
++ L K G E + M EKG P+ V Y ++ G+ + ++ A R+ +M
Sbjct: 263 TLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEK 322
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
G+ P+ SY +++ + + ++A +M G SP+ ++ + +G C+ EEA
Sbjct: 323 GLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEA 382
Query: 299 KGAIKTLIEKGFAVNEKAVKDFLNK 323
+ ++ KG+ ++ FL K
Sbjct: 383 AVILDEMLFKGYKPRRDRLEGFLQK 407
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 207 PEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEF 266
P+ Y ++ G +++ DDA ++F +M + P ++ L+ GLCK SR+++A +
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 267 CVEMLEA-GHSPNVTTFVDLVEGFCK 291
+ML+ G P V + L++ C+
Sbjct: 210 KHDMLKVYGVRPTVHIYASLIKALCQ 235
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 77/155 (49%), Gaps = 3/155 (1%)
Query: 154 QPAMPEDADEIFKKMKETGL-IPNAV--AMLDGLCKDGLVQEALKLFGLMREKGTIPEIV 210
Q E A+ + ++M+E G+ P A+ M+DG ++ L +F ++E G P +V
Sbjct: 426 QTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVV 485
Query: 211 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 270
Y ++ YTK K A + R M+ G+ N +Y++++ G K +AF +M
Sbjct: 486 TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDM 545
Query: 271 LEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTL 305
++ G P+V + +++ FC ++ A +K +
Sbjct: 546 VKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEM 580
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 64/131 (48%), Gaps = 3/131 (2%)
Query: 164 IFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
+FK++KE G P V +++ K G + +AL++ +M+E+G + Y+ ++ G+
Sbjct: 471 VFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFV 530
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
K +A +F M G+ P+ Y ++ C + A + EM + H P
Sbjct: 531 KLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTR 590
Query: 281 TFVDLVEGFCK 291
TF+ ++ G+ K
Sbjct: 591 TFMPIIHGYAK 601
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 70/155 (45%), Gaps = 1/155 (0%)
Query: 180 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 239
++ G K G ++ +L++F +MR G +P + + ++ G + + + A I +M G
Sbjct: 595 IIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAG 654
Query: 240 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAK 299
+S N +YT ++QG AFE+ + G ++ T+ L++ CK ++ A
Sbjct: 655 VSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSAL 714
Query: 300 GAIKTLIEKGFAVNEKAVKDFLNKKKPFSPSVWEA 334
K + + N V + L VWEA
Sbjct: 715 AVTKEMSARNIPRN-SFVYNILIDGWARRGDVWEA 748
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 6/140 (4%)
Query: 180 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 239
++DG + G V EA L M+++G P+I YT+ + +KA + A + +M++ G
Sbjct: 735 LIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALG 794
Query: 240 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA- 298
+ PN +YT L++G + S + A EM G P+ + L+ I EA
Sbjct: 795 VKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAY 854
Query: 299 --KGAI---KTLIEKGFAVN 313
G + K ++E G V+
Sbjct: 855 IYSGVMTICKEMVEAGLIVD 874
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 74/163 (45%), Gaps = 3/163 (1%)
Query: 163 EIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 219
E+F M+ G +P +++GL + +++A+++ M G YT +++GY
Sbjct: 610 EVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGY 669
Query: 220 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNV 279
A F ++Q+ G+ + F+Y L++ CK R+Q A EM N
Sbjct: 670 ASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNS 729
Query: 280 TTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
+ L++G+ + + EA I+ + ++G + F++
Sbjct: 730 FVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFIS 772
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 66/141 (46%), Gaps = 3/141 (2%)
Query: 161 ADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A E F +++ GL I A+L CK G +Q AL + M + +Y +++
Sbjct: 678 AFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILID 737
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G+ + +A + ++M+ G+ P+ +YT + K + A + EM G P
Sbjct: 738 GWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKP 797
Query: 278 NVTTFVDLVEGFCKEQGIEEA 298
N+ T+ L++G+ + E+A
Sbjct: 798 NIKTYTTLIKGWARASLPEKA 818
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 12/160 (7%)
Query: 160 DADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A ++ ++MK+ G+ P+ + + K G + A + M G P I YT ++
Sbjct: 747 EAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLI 806
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEF------CVEM 270
+G+ +A + A + +M++ GI P+ Y L+ L + + +A+ + C EM
Sbjct: 807 KGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEM 866
Query: 271 LEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
+EAG ++ T V + CK IE + G + ++K F
Sbjct: 867 VEAGLIVDMGTAVHWSKCLCK---IEASGGELTETLQKTF 903
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 15/189 (7%)
Query: 131 DNKAGNSSETNQSEEATKSS--------NSNQPAMPEDADEIFKKMK-ETGLIPNAVAML 181
D K N S +Q E ++ S N A+ ++I K + E GL M+
Sbjct: 263 DTKMSNKSSWHQEREGSRKSLQRILDTNGDNWQAVISAFEKISKPSRTEFGL------MV 316
Query: 182 DGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGIS 241
+ G + A + F MR +G P IYT+++ Y D+A RKM+ GI
Sbjct: 317 KFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIE 376
Query: 242 PNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGA 301
+ +Y+V+V G K + A + E + N + + ++ C+ +E A+
Sbjct: 377 MSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEAL 436
Query: 302 IKTLIEKGF 310
++ + E+G
Sbjct: 437 VREMEEEGI 445
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 67/155 (43%), Gaps = 3/155 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E AD F + K NA ++ C+ ++ A L M E+G I IY +
Sbjct: 396 EAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTM 455
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++GYT +F++++ G +P +Y L+ K ++ A E M E G
Sbjct: 456 MDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGV 515
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
N+ T+ ++ GF K + A + ++++G
Sbjct: 516 KHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGM 550
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 3/165 (1%)
Query: 161 ADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A E+ + MKE G+ N M++G K A +F M ++G P++++Y ++
Sbjct: 503 ALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIIS 562
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
+ D A + ++MQ P ++ ++ G K ++ + E M G P
Sbjct: 563 AFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVP 622
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
V TF L+ G +++ +E+A + + G + NE +
Sbjct: 623 TVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQ 667
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 72/155 (46%), Gaps = 7/155 (4%)
Query: 161 ADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A E F++M+ G+ P + +++ + EAL M+E+G +V Y+ +V
Sbjct: 328 ARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVG 387
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
G++KA A+ A F + + + NA Y ++ C+ ++ A EM E G
Sbjct: 388 GFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDA 447
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAI--KTLIEKGF 310
+ + +++G+ +E KG + K L E GF
Sbjct: 448 PIAIYHTMMDGYT--MVADEKKGLVVFKRLKECGF 480
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 71/166 (42%), Gaps = 3/166 (1%)
Query: 159 EDADEIFKKMKETGLIPN---AVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A EI +M G+ N ++ G G +A + F ++ +G +I Y A+
Sbjct: 641 EKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEAL 700
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++ K+ + A + ++M + I N+F Y +L+ G + + +A + +M + G
Sbjct: 701 LKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGV 760
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFL 321
P++ T+ + K + A I+ + G N K +
Sbjct: 761 KPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLI 806
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 71/131 (54%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
L LC+ G + A+K++ ++ ++ + ++A+++ + K + A +F++
Sbjct: 424 VYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILE 483
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
+ SYTV ++GL + R+++A+ C +M E G PN T+ ++ G CKE+ E+
Sbjct: 484 KYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKV 543
Query: 299 KGAIKTLIEKG 309
+ ++ I++G
Sbjct: 544 RKILRECIQEG 554
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 69/145 (47%), Gaps = 3/145 (2%)
Query: 164 IFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
+ K+M G PN +L C+ G V EA ++ GLM G + +++ +V G+
Sbjct: 199 VLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFF 258
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
++ + A +F KM G SPN +YT L++G + +AF ++ G +P++
Sbjct: 259 RSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIV 318
Query: 281 TFVDLVEGFCKEQGIEEAKGAIKTL 305
++ + + EEA+ +L
Sbjct: 319 LCNLMIHTYTRLGRFEEARKVFTSL 343
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 158 PEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 214
P+ A ++F KM + G PN V +++ G G+V EA + ++ +G P+IV+
Sbjct: 263 PQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNL 322
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLC 255
++ YT+ + ++A+++F ++ + P+ +++ ++ LC
Sbjct: 323 MIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLC 363
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 176 NAVAML-DGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRK 234
N +ML G + G Q+A+ LF M + G P +V YT++++G+ D+A + K
Sbjct: 248 NVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSK 307
Query: 235 MQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFC 290
+QS G++P+ +++ + R ++A + + + P+ TF ++ C
Sbjct: 308 VQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLC 363
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 78/163 (47%), Gaps = 15/163 (9%)
Query: 157 MPEDADEIFKKMKETGLIPNAVAMLDG---------LCKDGLVQEALKLFGLMREKGTIP 207
+P A EI++ M++T ++LDG L K G + A KLF M+E+ P
Sbjct: 293 LPYKAFEIYESMEKTD------SLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRP 346
Query: 208 EIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFC 267
+++++V+ KA + D + +++ +MQ G P+A + L+ K +L A
Sbjct: 347 SFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLW 406
Query: 268 VEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
EM ++G PN + ++E K +E A K + + GF
Sbjct: 407 DEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGF 449
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 100/206 (48%), Gaps = 14/206 (6%)
Query: 116 NQLGDSFLDKFKLGFDNKAGNSSETNQSEEATKSSNSNQPAMP--------EDADEIFKK 167
N L FL+K G KA E+ + ++ ++ + +P + A ++F++
Sbjct: 282 NNLMMLFLNK---GLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQ 338
Query: 168 MKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHK 224
MKE L P+ +++D + K G + ++K++ M+ G P ++ ++++ Y KA K
Sbjct: 339 MKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGK 398
Query: 225 ADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVD 284
D A R++ +M+ +G PN YT++++ K +L+ A +M +AG P +T+
Sbjct: 399 LDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSC 458
Query: 285 LVEGFCKEQGIEEAKGAIKTLIEKGF 310
L+E ++ A ++ G
Sbjct: 459 LLEMHAGSGQVDSAMKIYNSMTNAGL 484
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 80/154 (51%), Gaps = 3/154 (1%)
Query: 163 EIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 219
+++ +M+ G P+A V+++D K G + AL+L+ M++ G P +YT ++E +
Sbjct: 369 KVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESH 428
Query: 220 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNV 279
K+ K + A +F+ M+ G P +Y+ L++ ++ A + M AG P +
Sbjct: 429 AKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGL 488
Query: 280 TTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
++++ L+ ++ ++ A + + G++V+
Sbjct: 489 SSYISLLTLLANKRLVDVAGKILLEMKAMGYSVD 522
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 165 FKKMKETGL-----IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 219
FKK +E+G N + ML GL +A +++ M + ++ + Y ++
Sbjct: 266 FKKAQESGCKIDTQTYNNLMML--FLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSL 323
Query: 220 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNV 279
K+ + D A ++F++M+ + P+ ++ LV + K RL + + +EM GH P+
Sbjct: 324 AKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSA 383
Query: 280 TTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
T FV L++ + K ++ A + + GF N
Sbjct: 384 TMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPN 417
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 78/166 (46%), Gaps = 4/166 (2%)
Query: 159 EDADEIFKKMKETGLIPN---AVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+ A ++ +MK++G PN +++ K G ++ A+ +F M + G +P Y+ +
Sbjct: 400 DTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCL 459
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+E + + + D A +I+ M + G+ P SY L+ L + A + +EM G+
Sbjct: 460 LEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGY 519
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFL 321
S +V D++ + K+ ++ A ++ + G N ++
Sbjct: 520 SVDVCA-SDVLMIYIKDASVDLALKWLRFMGSSGIKTNNFIIRQLF 564
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 73/141 (51%), Gaps = 4/141 (2%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A + K+M+E ++V ++ + G +EA + +M +KG +P + YT V+
Sbjct: 334 EALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVI 393
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+ Y KA K D+A ++F M+ G PN +Y ++ L K SR + + +M G S
Sbjct: 394 DAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCS 453
Query: 277 PNVTTFVDLVEGFCKEQGIEE 297
PN T+ ++ C +G+++
Sbjct: 454 PNRATWNTML-ALCGNKGMDK 473
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 84/188 (44%), Gaps = 19/188 (10%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
++ F K+ G P+ V +ML ++ + +A + +RE G P++V Y ++++
Sbjct: 615 SERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMD 674
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
Y + + A+ I + ++ + + P+ SY +++G C+ +Q+A EM E G P
Sbjct: 675 MYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRP 734
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVK----------------DFL 321
+ T+ V G+ E + I+ + + NE K DF+
Sbjct: 735 CIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFV 794
Query: 322 NKKKPFSP 329
+K K F P
Sbjct: 795 SKIKTFDP 802
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 63/140 (45%), Gaps = 3/140 (2%)
Query: 146 ATKSSNSNQPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMRE 202
+T S + + +A E F ++K G P V A+L K G+ EAL + M E
Sbjct: 285 STVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEE 344
Query: 203 KGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQD 262
+ V Y +V Y +A + +A + M G+ PNA +YT ++ K + +
Sbjct: 345 NSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDE 404
Query: 263 AFEFCVEMLEAGHSPNVTTF 282
A + M EAG PN T+
Sbjct: 405 ALKLFYSMKEAGCVPNTCTY 424
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 82/201 (40%), Gaps = 38/201 (18%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A + + M + G++PNA+ ++D K G EALKLF M+E G +P Y AV
Sbjct: 368 KEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAV 427
Query: 216 VEGYTKAHKADD-----------------------------------AKRIFRKMQSNGI 240
+ K ++++ R+FR+M+S G
Sbjct: 428 LSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGF 487
Query: 241 SPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKG 300
P+ ++ L+ +C DA + EM AG + VTT+ L+ ++ +
Sbjct: 488 EPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGEN 547
Query: 301 AIKTLIEKGFAVNEKAVKDFL 321
I + KGF E + L
Sbjct: 548 VISDMKSKGFKPTETSYSLML 568
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 8/161 (4%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGL---MREKGTIPEIVIY 212
E A ++F++MKE G P V +LD K G + K+ G+ MR KG +
Sbjct: 227 EKAIDLFERMKEMGPSPTLVTYNVILDVFGKMG--RSWRKILGVLDEMRSKGLKFDEFTC 284
Query: 213 TAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 272
+ V+ + +AK F +++S G P +Y L+Q K +A EM E
Sbjct: 285 STVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEE 344
Query: 273 AGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
+ T+ +LV + + +EA G I+ + +KG N
Sbjct: 345 NSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPN 385
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 68/148 (45%), Gaps = 3/148 (2%)
Query: 180 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 239
+L ++GL++EA + F ++ G P V Y A+++ + KA +A + ++M+ N
Sbjct: 287 VLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENS 346
Query: 240 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAK 299
++ +Y LV + ++A M + G PN T+ +++ + K +EA
Sbjct: 347 CPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEAL 406
Query: 300 GAIKTLIEKGFAVNE---KAVKDFLNKK 324
++ E G N AV L KK
Sbjct: 407 KLFYSMKEAGCVPNTCTYNAVLSLLGKK 434
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 81/163 (49%), Gaps = 7/163 (4%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E+A +F++M + G+ P A +LD G+V++A +F MR P++ YT +
Sbjct: 338 EEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTM 397
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ Y A + A++ F++++ +G PN +Y L++G K + ++ E +M +G
Sbjct: 398 LSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGI 457
Query: 276 SPNVTTFVDLVE--GFCKEQGIEEAKGAIKTLIEKGFAVNEKA 316
N T +++ G CK G A G K + G ++KA
Sbjct: 458 KANQTILTTIMDASGRCKNFG--SALGWYKEMESCGVPPDQKA 498
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 73/135 (54%), Gaps = 3/135 (2%)
Query: 178 VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQS 237
+ ++ K G A ++ ++ + G+ P ++ YTA++E Y + K ++A+ IFR+MQS
Sbjct: 150 LMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQS 209
Query: 238 NGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS---PNVTTFVDLVEGFCKEQG 294
+G P+A +Y ++++ + + ++A E +L+ S P+ + ++ + K
Sbjct: 210 SGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGN 269
Query: 295 IEEAKGAIKTLIEKG 309
E+A+ +++ KG
Sbjct: 270 YEKARKVFSSMVGKG 284
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 3/147 (2%)
Query: 156 AMPEDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIY 212
M E A +FK M+ + P+ ML ++ A K F ++ G P IV Y
Sbjct: 370 GMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTY 429
Query: 213 TAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 272
+++GY KA+ + ++ KM+ +GI N T ++ +C A + EM
Sbjct: 430 GTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMES 489
Query: 273 AGHSPNVTTFVDLVEGFCKEQGIEEAK 299
G P+ L+ + +EEAK
Sbjct: 490 CGVPPDQKAKNVLLSLASTQDELEEAK 516
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 79/153 (51%), Gaps = 9/153 (5%)
Query: 159 EDADEIFKKM---KETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIY 212
++A+E+F+ + K++ L P+ M+ K G ++A K+F M KG V Y
Sbjct: 233 KEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTY 292
Query: 213 TAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 272
+++ + ++K + +I+ +MQ + I P+ SY +L++ + R ++A EML+
Sbjct: 293 NSLM-SFETSYK--EVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLD 349
Query: 273 AGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTL 305
AG P + L++ F +E+AK K++
Sbjct: 350 AGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM 382
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 4/168 (2%)
Query: 159 EDADEIFKKM-KETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 214
++A E+F+ M + G+ P+ V M++G C+ G V+ A K+ M++ G P + Y+A
Sbjct: 249 KEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSA 308
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
++ G+ K K +AK+ F +++ G+ + YT L+ C+ +A + EM +
Sbjct: 309 LMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASR 368
Query: 275 HSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
+ T+ ++ G E EEA + +G +N+ + + LN
Sbjct: 369 CRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILN 416
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 78/151 (51%), Gaps = 6/151 (3%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A + F ++K+TGL + V +++ C++G EA+KL G M+ + + Y +
Sbjct: 320 QEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVI 379
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ G + ++++A ++ + S G+ N SY +++ LC L+ A +F M E G
Sbjct: 380 LRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGI 439
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLI 306
P+ T+ +LV C E G E ++ LI
Sbjct: 440 WPHHATWNELVVRLC-ESGYTEI--GVRVLI 467
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 78/155 (50%), Gaps = 3/155 (1%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A +I MK+ G PN A+++G CK G +QEA + F +++ G + V YT +
Sbjct: 285 ERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTL 344
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ + + + D+A ++ +M+++ + +Y V+++GL R ++A + + G
Sbjct: 345 MNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGV 404
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
N ++ ++ C +E+A + + E+G
Sbjct: 405 HLNKGSYRIILNALCCNGELEKAVKFLSVMSERGI 439
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 88/171 (51%), Gaps = 5/171 (2%)
Query: 161 ADEIFKKMK-ETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
A +++K MK +G P+A+ ++D L K EA L M + G P + Y+A++
Sbjct: 421 ALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALI 480
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
GY KA K ++A+ F M +G P+ +Y+V++ L + + + A+ +M+ GH+
Sbjct: 481 CGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHT 540
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLNKKKPF 327
P+ T + ++ G KE ++ + I+ + E+ +N + L K + F
Sbjct: 541 PSYTLYELMILGLMKENRSDDIQKTIRDM-EELCGMNPLEISSVLVKGECF 590
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 78/157 (49%), Gaps = 3/157 (1%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+ +I+ MK G +P M++ LCK V++A + M E E+ I+ +++
Sbjct: 875 EVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSML 934
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+ YT +++++++ G+ P+ +Y L+ C+ R ++ + +M G
Sbjct: 935 KMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLD 994
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
P + T+ L+ F K++ +E+A+ + L+ KG ++
Sbjct: 995 PKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLD 1031
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 83/157 (52%), Gaps = 4/157 (2%)
Query: 157 MPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 213
+ +A+ +F +++ G P+AV ++L ++ ++ +++ M++ G + + Y
Sbjct: 347 LAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYN 406
Query: 214 AVVEGYTKAHKADDAKRIFRKMQS-NGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 272
++ Y K + D A ++++ M+ +G +P+A +YTVL+ L K +R +A EML+
Sbjct: 407 TIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLD 466
Query: 273 AGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
G P + T+ L+ G+ K EEA+ ++ G
Sbjct: 467 VGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSG 503
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/167 (19%), Positives = 80/167 (47%), Gaps = 5/167 (2%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQE--ALKLFGLMREKGTIPEIVIYTAV 215
A E+ M++ G +P+ ++ +++ K G + A++L ++R G P+ + Y +
Sbjct: 244 AQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTL 303
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ ++ D A ++F M+++ P+ ++Y ++ +C +A +E+ G
Sbjct: 304 LSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGF 363
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
P+ T+ L+ F +E+ E+ K + + + GF +E ++
Sbjct: 364 FPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIH 410
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 73/157 (46%), Gaps = 4/157 (2%)
Query: 158 PEDADEIFKKMKETGL----IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 213
PE A ++ + + G P +++ K L Q+A + G +R+ G P++ +
Sbjct: 732 PETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWN 791
Query: 214 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 273
+++ Y + + A+ IF M +G SP S +L+ LC RL++ + E+ +
Sbjct: 792 SLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDM 851
Query: 274 GHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
G + ++ + +++ F + I E K ++ G+
Sbjct: 852 GFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGY 888
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 76/157 (48%), Gaps = 8/157 (5%)
Query: 159 EDADEIFKKMKETG-----LIPNAVAMLDGLCKDGLVQEALKLFGLMR-EKGTIPEIVIY 212
E E++++M++ G + N + + G K G + AL+L+ M+ G P+ + Y
Sbjct: 384 EKVKEVYQQMQKMGFGKDEMTYNTIIHMYG--KQGQLDLALQLYKDMKGLSGRNPDAITY 441
Query: 213 TAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 272
T +++ KA++ +A + +M GI P +Y+ L+ G K + ++A + ML
Sbjct: 442 TVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLR 501
Query: 273 AGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
+G P+ + +++ + +A G + +I G
Sbjct: 502 SGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDG 538
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 69/144 (47%), Gaps = 3/144 (2%)
Query: 158 PEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 214
P A E+ ++ +GL P+A+ +L +D + A+K+F M P++ Y A
Sbjct: 278 PNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNA 337
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
++ Y + A +A+R+F +++ G P+A +Y L+ + + E +M + G
Sbjct: 338 MISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMG 397
Query: 275 HSPNVTTFVDLVEGFCKEQGIEEA 298
+ T+ ++ + K+ ++ A
Sbjct: 398 FGKDEMTYNTIIHMYGKQGQLDLA 421
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 74/141 (52%), Gaps = 3/141 (2%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A E F++M +TGL+P+ V A+LD K G V+E L L+ G P+ + ++ + +
Sbjct: 240 AIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGK 299
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
+ +A D + + ++M+S + PN Y L++ + + + A EMLEAG +P
Sbjct: 300 MFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTP 359
Query: 278 NVTTFVDLVEGFCKEQGIEEA 298
N T LV+ + K + +A
Sbjct: 360 NEKTLTALVKIYGKARWARDA 380
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 4/156 (2%)
Query: 158 PEDADEIFKKMKETGLIPN---AVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 214
P A +F +M E GL PN A++ K ++AL+L+ M+ K + ++Y
Sbjct: 342 PGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNT 401
Query: 215 VVEGYTKAHKADDAKRIFRKM-QSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 273
++ ++A+R+F M +S P+ FSYT ++ + + A E EML+A
Sbjct: 402 LLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKA 461
Query: 274 GHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
G NV LV+ K + I++ I++G
Sbjct: 462 GVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRG 497
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 71/158 (44%), Gaps = 5/158 (3%)
Query: 189 LVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYT 248
L +A++ F M + G +P+ V Y+A+++ Y+K+ K ++ ++ + + G P+A +++
Sbjct: 236 LYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFS 295
Query: 249 VLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
VL + + EM PNV + L+E + A+ ++E
Sbjct: 296 VLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEA 355
Query: 309 GFAVNEKAVKDFLN-----KKKPFSPSVWEAIFGKKAP 341
G NEK + + + + +WE + KK P
Sbjct: 356 GLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWP 393
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 74/150 (49%), Gaps = 1/150 (0%)
Query: 161 ADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
A + F++M+E +I +L C++G +EA++L M ++G P +V + ++ GY
Sbjct: 235 ATKFFRRMRERDVIAWNSVLL-AYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYN 293
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
+ K D A + +KM++ GI+ + F++T ++ GL A + +M AG PN
Sbjct: 294 QLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAV 353
Query: 281 TFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
T + V + I + ++ GF
Sbjct: 354 TIMSAVSACSCLKVINQGSEVHSIAVKMGF 383
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 74/139 (53%), Gaps = 7/139 (5%)
Query: 156 AMPEDADEIFKKMKETGLIPNAVAMLDGLCKDG---LVQEALKLFGLMREKGTIPEIVIY 212
M A ++F+KM G++PNAV ++ + ++ + ++ + + G I ++++
Sbjct: 331 GMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVG 390
Query: 213 TAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 272
++V+ Y+K K +DA+++F +++ + +++ ++ G C+ A+E M +
Sbjct: 391 NSLVDMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKAYELFTRMQD 446
Query: 273 AGHSPNVTTFVDLVEGFCK 291
A PN+ T+ ++ G+ K
Sbjct: 447 ANLRPNIITWNTMISGYIK 465
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 65/129 (50%), Gaps = 2/129 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEG 218
EDA ++F +K + +M+ G C+ G +A +LF M++ P I+ + ++ G
Sbjct: 404 EDARKVFDSVKNKD-VYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISG 462
Query: 219 YTKAHKADDAKRIFRKMQSNG-ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
Y K +A +F++M+ +G + N ++ +++ G + + +A E +M + P
Sbjct: 463 YIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMP 522
Query: 278 NVTTFVDLV 286
N T + L+
Sbjct: 523 NSVTILSLL 531
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 12/156 (7%)
Query: 161 ADEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEA----LKLFGLMREKGTIPEIVIYT 213
D + K G+ + +AM +D L K+ ++ A LKLF ++ P+ +
Sbjct: 223 VDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIK-----PDARTFN 277
Query: 214 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 273
++ G+ KA K DDA+ + M+ +P+ +YT V+ CK + E EM E
Sbjct: 278 ILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMREN 337
Query: 274 GHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
G +PNV T+ ++ K + + EA G + + E G
Sbjct: 338 GCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDG 373
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 3/133 (2%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+DA + MK T P+ V + ++ CK+G + ++ MRE G P +V YT V
Sbjct: 290 DDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIV 349
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ K+ + +A ++ KM+ +G P+A Y+ L+ L K R +DA E +M G
Sbjct: 350 MHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGV 409
Query: 276 SPNVTTFVDLVEG 288
+V + ++
Sbjct: 410 RRDVLVYNTMISA 422
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 4/154 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A E+F K+ +T + P+A ++ G CK +A + LM+ P++V YT+
Sbjct: 256 EHAHEVFLKLFDT-IKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSF 314
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
VE Y K + +M+ NG +PN +YT+++ L K ++ +A +M E G
Sbjct: 315 VEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGC 374
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
P+ + L+ K ++A + + +G
Sbjct: 375 VPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQG 408
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 79/192 (41%), Gaps = 41/192 (21%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
+E+ ++M+E G PN V ++ L K V EAL ++ M+E G +P+ Y++++
Sbjct: 327 VNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIH 386
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAF-----------EF 266
+K + DA IF M + G+ + Y ++ SR + A E
Sbjct: 387 ILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGES 446
Query: 267 C---VE------------------------MLEAGHSPNVTTFVDLVEGFCKEQGIEEAK 299
C VE M++ S +V+T++ L+ G C +EEA
Sbjct: 447 CSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEAC 506
Query: 300 GAIKTLIEKGFA 311
+ + KG
Sbjct: 507 LFFEEAVRKGMV 518
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 6/158 (3%)
Query: 158 PEDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMRE---KGTIPEIVIYTA 214
P +A +FK + ETG P+ ++ L + ++ + ++ E GT + + + A
Sbjct: 61 PHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNA 120
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
V+ ++++ +DA + KM+ G++P +Y L++G + + + E MLE G
Sbjct: 121 VINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEG 180
Query: 275 H---SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
+ PN+ TF LV+ +CK++ +EEA +K + E G
Sbjct: 181 NVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECG 218
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 87/179 (48%), Gaps = 16/179 (8%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLC----KDGLVQEALKLFGLMREKGTIPEIVIY 212
D ++MKE + N V ++++G +DG+ + + LM+E +++ Y
Sbjct: 278 DGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDE----VLTLMKECNVKADVITY 333
Query: 213 TAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 272
+ V+ ++ A + A ++F++M G+ P+A +Y++L +G + + A E +E L
Sbjct: 334 STVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEEL-LETLI 392
Query: 273 AGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN----EKAVKDFLNKKKPF 327
PNV F ++ G+C +++A + + G + N E + +L K+P+
Sbjct: 393 VESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPW 451
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 73/150 (48%), Gaps = 4/150 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A ++FK+M + G+ P+A A + G + ++A +L + + P +VI+T V
Sbjct: 347 EKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESR-PNVVIFTTV 405
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ G+ DDA R+F KM G+SPN ++ L+ G + + A E M G
Sbjct: 406 ISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGV 465
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTL 305
P +TF+ L E + +E+ AI L
Sbjct: 466 KPENSTFLLLAEAWRVAGLTDESNKAINAL 495
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 75/191 (39%), Gaps = 46/191 (24%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTI---PEIVIY 212
EDA + KMKE GL P ++ G G + + +L LM E+G + P I +
Sbjct: 132 EDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTF 191
Query: 213 TAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYT------------------------ 248
+V+ + K K ++A + +KM+ G+ P+ +Y
Sbjct: 192 NVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMV 251
Query: 249 -------------VLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCK---E 292
++V G C+ R++D F M E N+ F L+ GF +
Sbjct: 252 MKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDR 311
Query: 293 QGIEEAKGAIK 303
GI+E +K
Sbjct: 312 DGIDEVLTLMK 322
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
A+++ + G +++A++ M+E G P Y +++GY A K + + + M
Sbjct: 120 AVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEE 179
Query: 239 G---ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTF 282
G + PN ++ VLVQ CK ++++A+E +M E G P+ T+
Sbjct: 180 GNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTY 226
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 4/158 (2%)
Query: 160 DADEIFKKMKETGLIP-NAV--AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA + M G P NAV ++ K G + EA ++ LM +G P++ YT ++
Sbjct: 390 DAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVII 449
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
GY K D+A+ I + + + +Y L++G CK +A + EM G
Sbjct: 450 SGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQ 509
Query: 277 PNVTTFVDLVEGFC-KEQGIEEAKGAIKTLIEKGFAVN 313
PN + L++ FC K E+A+ + + +KG +N
Sbjct: 510 PNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLHLN 547
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 3/128 (2%)
Query: 180 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 239
++ LC+ V++A L M KG P ++ VV +K D+AK + + M+S G
Sbjct: 378 VIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRG 437
Query: 240 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAK 299
+ P+ ++YTV++ G K + +A E E + + T+ L+ G+CK IEE
Sbjct: 438 LKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCK---IEEYD 494
Query: 300 GAIKTLIE 307
A+K L E
Sbjct: 495 EALKLLNE 502
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 5/125 (4%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGT-----IPEIVIYTAVVEGYTKAHKADDAKRIFR 233
++L + D +A L+ L++E G + + I ++ + K K+ A +F
Sbjct: 196 SLLVAIASDTRRMDAYGLWDLVKEIGEKESCGVLNLEILNELIALFGKLGKSKAAFDVFS 255
Query: 234 KMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQ 293
K + G +PNA +Y + ++ LCK S + A C +ML++G +++ FCKE
Sbjct: 256 KTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEG 315
Query: 294 GIEEA 298
EEA
Sbjct: 316 KAEEA 320
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 12/149 (8%)
Query: 159 EDADEIFK--KMKETGLIPNAVA-MLDGLCK-DGLVQEALKLFGLM----REKGTIPEIV 210
E+A +++ K KE L P VA ++ LCK DG + A ++ G + R +G P
Sbjct: 318 EEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTITFAQEMLGDLSGEARRRGIKP--- 374
Query: 211 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 270
++ V+ + DAK + M S G +P + ++V K L +A E M
Sbjct: 375 -FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLM 433
Query: 271 LEAGHSPNVTTFVDLVEGFCKEQGIEEAK 299
G P+V T+ ++ G+ K ++EA+
Sbjct: 434 ESRGLKPDVYTYTVIISGYAKGGMMDEAQ 462
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 6/158 (3%)
Query: 158 PEDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMRE---KGTIPEIVIYTA 214
P +A +FK + ETG P+ ++ L + ++ + ++ E GT + + + A
Sbjct: 61 PHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNA 120
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
V+ ++++ +DA + KM+ G++P +Y L++G + + + E MLE G
Sbjct: 121 VINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEG 180
Query: 275 H---SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
+ PN+ TF LV+ +CK++ +EEA +K + E G
Sbjct: 181 NVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECG 218
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 70/138 (50%), Gaps = 5/138 (3%)
Query: 194 LKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQG 253
+++ LM+E +++ Y+ V+ ++ A + A ++F++M G+ P+A +Y++L +G
Sbjct: 340 VQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKG 399
Query: 254 LCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
+ + A E +E L PNV F ++ G+C +++A + + G + N
Sbjct: 400 YVRAKEPKKAEEL-LETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPN 458
Query: 314 ----EKAVKDFLNKKKPF 327
E + +L K+P+
Sbjct: 459 IKTFETLMWGYLEVKQPW 476
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 73/150 (48%), Gaps = 4/150 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A ++FK+M + G+ P+A A + G + ++A +L + + P +VI+T V
Sbjct: 372 EKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESR-PNVVIFTTV 430
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ G+ DDA R+F KM G+SPN ++ L+ G + + A E M G
Sbjct: 431 ISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGV 490
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTL 305
P +TF+ L E + +E+ AI L
Sbjct: 491 KPENSTFLLLAEAWRVAGLTDESNKAINAL 520
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
A+++ + G +++A++ M+E G P Y +++GY A K + + + M
Sbjct: 120 AVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEE 179
Query: 239 G---ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTF 282
G + PN ++ VLVQ CK ++++A+E +M E G P+ T+
Sbjct: 180 GNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTY 226
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 73/186 (39%), Gaps = 46/186 (24%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTI---PEIVIY 212
EDA + KMKE GL P ++ G G + + +L LM E+G + P I +
Sbjct: 132 EDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTF 191
Query: 213 TAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYT------------------------ 248
+V+ + K K ++A + +KM+ G+ P+ +Y
Sbjct: 192 NVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMV 251
Query: 249 -------------VLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCK---E 292
++V G C+ R++D F M E N+ F L+ GF +
Sbjct: 252 MKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDR 311
Query: 293 QGIEEA 298
GI+E
Sbjct: 312 DGIDEV 317
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
Query: 196 LFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQS-NGISPNAFSYTVLVQGL 254
LF M + G P++ +V+GY + +DA RIF +M PN+F+Y L+ GL
Sbjct: 275 LFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGL 334
Query: 255 CKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
C R +A E EM G PN ++ LV F I++A + +IE G V+
Sbjct: 335 CAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVD 393
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 4/154 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTI-PEIVIYTA 214
E +F++M ++G+ P+ A+ + G V +AL++F M P Y
Sbjct: 270 ETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDY 329
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
++ G + +A+ + +M+ G PN SY LV + DA + EM+E G
Sbjct: 330 LIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENG 389
Query: 275 HSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
+ ++ LV+ C++ +EA ++ L EK
Sbjct: 390 RVVDFISYRTLVDESCRKGKYDEATRLLEMLREK 423
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 71/141 (50%), Gaps = 3/141 (2%)
Query: 162 DEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEG 218
D I +M + PN +++G C++G ++EAL+ F M+E G P + ++ ++++G
Sbjct: 516 DMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKG 575
Query: 219 YTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPN 278
+ + D + M+ G+ P+ +++ L+ ++ E +MLE G P+
Sbjct: 576 FLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPD 635
Query: 279 VTTFVDLVEGFCKEQGIEEAK 299
+ F L +G+ + E+A+
Sbjct: 636 IHAFSILAKGYARAGEPEKAE 656
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 70/131 (53%), Gaps = 4/131 (3%)
Query: 163 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 219
E+ M+E G+ P+ V +++ G ++ +++ M E G P+I ++ + +GY
Sbjct: 587 EVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGY 646
Query: 220 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE-AGHSPN 278
+A + + A++I +M+ G+ PN YT ++ G C ++ A + +M G SPN
Sbjct: 647 ARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPN 706
Query: 279 VTTFVDLVEGF 289
+TT+ L+ GF
Sbjct: 707 LTTYETLIWGF 717
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 9/173 (5%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLM-REKGTIPEIVIYTA 214
+ A +IF+KMKE+G P A ++ G K G ++E+ +L +M R++ P
Sbjct: 406 DQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNI 465
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCV-EMLEA 273
+V+ + K ++A I KMQS G+ P+ ++ L + + A + + ML
Sbjct: 466 LVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHN 525
Query: 274 GHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN----EKAVKDFLN 322
PNV T +V G+C+E +EEA + E G N +K FLN
Sbjct: 526 KVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLN 578
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 70/132 (53%), Gaps = 4/132 (3%)
Query: 164 IFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
+ K+++ GL P+ + A+++ + G + +A+K+F M+E G P + +++GY
Sbjct: 376 LISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYG 435
Query: 221 KAHKADDAKRIFRKM-QSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNV 279
K K +++ R+ M + + PN + +LVQ C ++++A+ +M G P+V
Sbjct: 436 KIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDV 495
Query: 280 TTFVDLVEGFCK 291
TF L + + +
Sbjct: 496 VTFNTLAKAYAR 507
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 79/177 (44%), Gaps = 8/177 (4%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E+A F +MKE G+ PN +++ G + ++ LM E G P++V ++ +
Sbjct: 548 EEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTL 607
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ ++ + I+ M GI P+ ++++L +G + + A + +M + G
Sbjct: 608 MNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGV 667
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTL-----IEKGFAVNEKAVKDFLNKKKPF 327
PNV + ++ G+C +++A K + + E + F K+P+
Sbjct: 668 RPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPW 724
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 63/127 (49%)
Query: 180 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 239
+++GL + G QEA +F + E+G P ++ YT +V T+ + K++ NG
Sbjct: 325 LMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNG 384
Query: 240 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAK 299
+ P+ + ++ + L A + +M E+G P +TF L++G+ K +EE+
Sbjct: 385 LKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESS 444
Query: 300 GAIKTLI 306
+ ++
Sbjct: 445 RLLDMML 451
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 70/145 (48%), Gaps = 5/145 (3%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
+EI+ M E G+ P+ A + G + G ++A ++ MR+ G P +VIYT ++
Sbjct: 620 CEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIIS 679
Query: 218 GYTKAHKADDAKRIFRKMQS-NGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G+ A + A ++++KM G+SPN +Y L+ G + + A E +M
Sbjct: 680 GWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVV 739
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGA 301
P T + +G+ K G+ + A
Sbjct: 740 PTRKTMQLIADGW-KSIGVSNSNDA 763
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 57/103 (55%)
Query: 211 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 270
+Y + T + D+A+ I + M++ G P+ +Y+ LV GLCK RL++A +M
Sbjct: 372 VYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQM 431
Query: 271 LEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
G P++ T+ L++G CK +++A ++EKGF ++
Sbjct: 432 EAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDID 474
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Query: 179 AMLDGLCKD----GLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRK 234
A+ DG+ + G EA ++ MR G P+ + Y+ +V G KA + ++A+ + +
Sbjct: 371 AVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQ 430
Query: 235 MQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQG 294
M++ G P+ ++T+L+QG CK + L A MLE G + L++GF
Sbjct: 431 MEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNK 490
Query: 295 IEEA 298
E A
Sbjct: 491 FEGA 494
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 73/149 (48%)
Query: 174 IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFR 233
I A+++ ++GL ++A ++F ++E G P++ +Y A++E Y++A A IF
Sbjct: 299 ICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFS 358
Query: 234 KMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQ 293
MQ G P+ SY ++V + DA EM G +P + + + L+ + K +
Sbjct: 359 LMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKAR 418
Query: 294 GIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
+ + + +K + E G + + LN
Sbjct: 419 DVTKCEAIVKEMSENGVEPDTFVLNSMLN 447
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 157 MPEDADEIFKKMKETGLIPNAV------AMLDGLCK-DGLVQEALKLFGLMREKGTIPEI 209
+ E A+ + +M+ + P + A ++GL K G +EA+ +F M+ P
Sbjct: 205 LIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTT 264
Query: 210 VIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCK---CSRLQDAFEF 266
Y ++ Y KA K+ + +++ +M+S+ PN +YT LV + C + ++ FE
Sbjct: 265 ETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFE- 323
Query: 267 CVEMLEAGHSPNVTTFVDLVEGF 289
++ E G P+V + L+E +
Sbjct: 324 --QLQEDGLEPDVYVYNALMESY 344
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 70/161 (43%), Gaps = 3/161 (1%)
Query: 153 NQPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEI 209
++ P A EIF M+ G P+ + M+D + GL +A +F M+ G P +
Sbjct: 345 SRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTM 404
Query: 210 VIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVE 269
+ ++ Y+KA + I ++M NG+ P+ F ++ + + + E
Sbjct: 405 KSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAE 464
Query: 270 MLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
M + +++T+ L+ + K +E + L EK F
Sbjct: 465 MENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNF 505
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 1/119 (0%)
Query: 160 DADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 219
DA ++F E LI +L + GL EAL+LF M+ +G P ++ + ++
Sbjct: 428 DAKKVFDSTVEKDLILWN-TLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSL 486
Query: 220 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPN 278
+ + D+AK +F +MQS+GI PN S+T ++ G+ + ++A F +M E+G PN
Sbjct: 487 LRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPN 545
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 14/155 (9%)
Query: 154 QPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIV 210
+ + +A +F M+ G+ PN + ++ L ++G V EA +F M+ G IP ++
Sbjct: 453 ESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLI 512
Query: 211 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRL------QDAF 264
+T ++ G + +++A RKMQ +G+ PNAFS TV L C+ L +
Sbjct: 513 SWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITV---ALSACAHLASLHIGRTIH 569
Query: 265 EFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAK 299
+ + L+ HS V+ LV+ + K I +A+
Sbjct: 570 GYIIRNLQ--HSSLVSIETSLVDMYAKCGDINKAE 602
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 71/137 (51%), Gaps = 4/137 (2%)
Query: 174 IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFR 233
I A ++D K G + +A K+F EK +++++ ++ Y ++ + +A R+F
Sbjct: 410 IVLASTVMDMYAKCGSIVDAKKVFDSTVEK----DLILWNTLLAAYAESGLSGEALRLFY 465
Query: 234 KMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQ 293
MQ G+ PN ++ +++ L + ++ +A + ++M +G PN+ ++ ++ G +
Sbjct: 466 GMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNG 525
Query: 294 GIEEAKGAIKTLIEKGF 310
EEA ++ + E G
Sbjct: 526 CSEEAILFLRKMQESGL 542
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 3/131 (2%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E+ +F+ M GL PN V A++ G+ AL + G +++ G IP++V YT +
Sbjct: 337 ENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCL 396
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ Y ++ + AK +F M+ PN +Y L+ L +A E +M + G
Sbjct: 397 LNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGI 456
Query: 276 SPNVTTFVDLV 286
PNV + L+
Sbjct: 457 KPNVVSVCTLL 467
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 3/151 (1%)
Query: 158 PEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 214
P A E+F M++ PN V A++D +G + EA+++F M + G P +V
Sbjct: 406 PGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCT 465
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
++ +++ K + + QS GI+ N +Y + + L+ A M +
Sbjct: 466 LLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKK 525
Query: 275 HSPNVTTFVDLVEGFCKEQGIEEAKGAIKTL 305
+ TF L+ G C+ EA +K +
Sbjct: 526 VKADSVTFTILISGSCRMSKYPEAISYLKEM 556
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 33/160 (20%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
++L K G V EA +F M+ G P+++ YT+++ Y + K A +F +M++N
Sbjct: 570 SVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEAN 629
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIE-- 296
GI P++ + CS L AF + G NV +DL+ +E+ I
Sbjct: 630 GIEPDSIA----------CSALMRAFN------KGGQPSNVFVLMDLM----REKEIPFT 669
Query: 297 -----EAKGAIKTLIEKGFAVNEKAVKDFLNKKKPFSPSV 331
E A TL E A+ D + P+ PS+
Sbjct: 670 GAVFFEIFSACNTLQEWKRAI------DLIQMMDPYLPSL 703
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 73/149 (48%)
Query: 174 IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFR 233
I A+++ ++GL ++A ++F ++E G P++ +Y A++E Y++A A IF
Sbjct: 321 ICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFS 380
Query: 234 KMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQ 293
MQ G P+ SY ++V + DA EM G +P + + + L+ + K +
Sbjct: 381 LMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKAR 440
Query: 294 GIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
+ + + +K + E G + + LN
Sbjct: 441 DVTKCEAIVKEMSENGVEPDTFVLNSMLN 469
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 157 MPEDADEIFKKMKETGLIPNAV------AMLDGLCK-DGLVQEALKLFGLMREKGTIPEI 209
+ E A+ + +M+ + P + A ++GL K G +EA+ +F M+ P
Sbjct: 227 LIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTT 286
Query: 210 VIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCK---CSRLQDAFEF 266
Y ++ Y KA K+ + +++ +M+S+ PN +YT LV + C + ++ FE
Sbjct: 287 ETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFE- 345
Query: 267 CVEMLEAGHSPNVTTFVDLVEGF 289
++ E G P+V + L+E +
Sbjct: 346 --QLQEDGLEPDVYVYNALMESY 366
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 70/161 (43%), Gaps = 3/161 (1%)
Query: 153 NQPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEI 209
++ P A EIF M+ G P+ + M+D + GL +A +F M+ G P +
Sbjct: 367 SRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTM 426
Query: 210 VIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVE 269
+ ++ Y+KA + I ++M NG+ P+ F ++ + + + E
Sbjct: 427 KSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAE 486
Query: 270 MLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
M + +++T+ L+ + K +E + L EK F
Sbjct: 487 MENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNF 527
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 78/143 (54%), Gaps = 13/143 (9%)
Query: 157 MPEDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
MP DA ++F +M + +I + ++ G K+G + EA K+F LM E+ +V +TA+V
Sbjct: 63 MPRDARKLFDEMPDRNII-SWNGLVSGYMKNGEIDEARKVFDLMPERN----VVSWTALV 117
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+GY K D A+ +F KM N S+TV++ G + R+ DA + EM+ +
Sbjct: 118 KGYVHNGKVDVAESLFWKMPEK----NKVSWTVMLIGFLQDGRIDDACKL-YEMIPDKDN 172
Query: 277 PNVTTFVDLVEGFCKEQGIEEAK 299
T+ ++ G CKE ++EA+
Sbjct: 173 IARTS---MIHGLCKEGRVDEAR 192
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
+M+ GLCK+G V EA ++F M E+ ++ +T +V GY + ++ DDA++IF M
Sbjct: 177 SMIHGLCKEGRVDEAREIFDEMSERS----VITWTTMVTGYGQNNRVDDARKIFDVMPEK 232
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEF 266
S+T ++ G + R++DA E
Sbjct: 233 ----TEVSWTSMLMGYVQNGRIEDAEEL 256
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 65/133 (48%)
Query: 178 VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQS 237
++ML+ LC G EA+++ + EKG + + ++Y V K + +F KM+
Sbjct: 411 MSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKK 470
Query: 238 NGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEE 297
+G SP+ F+Y +L+ + + +A E+ + P++ ++ L+ K ++E
Sbjct: 471 DGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDE 530
Query: 298 AKGAIKTLIEKGF 310
A K + EKG
Sbjct: 531 AHVRFKEMQEKGL 543
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 72/130 (55%), Gaps = 3/130 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A IF++++ + P+ ++ +++ L K+G V EA F M+EKG P++V Y+ +
Sbjct: 494 DEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTL 553
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+E + K + + A +F +M G PN +Y +L+ L K R +A + +M + G
Sbjct: 554 MECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGL 613
Query: 276 SPNVTTFVDL 285
+P+ T+ L
Sbjct: 614 TPDSITYTVL 623
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 75/152 (49%), Gaps = 3/152 (1%)
Query: 163 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 219
++F+KMK+ G P+ ++ + G V EA+ +F + P+I+ Y +++
Sbjct: 463 DLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCL 522
Query: 220 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNV 279
K D+A F++MQ G++P+ +Y+ L++ K R++ A+ EML G PN+
Sbjct: 523 GKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNI 582
Query: 280 TTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
T+ L++ K EA + ++G
Sbjct: 583 VTYNILLDCLEKNGRTAEAVDLYSKMKQQGLT 614
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A E+ K+ E G++ + + + L K + LF M++ G P+I Y ++
Sbjct: 425 EAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILI 484
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+ + + D+A IF +++ + P+ SY L+ L K + +A EM E G +
Sbjct: 485 ASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLN 544
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
P+V T+ L+E F K + +E A + ++ KG
Sbjct: 545 PDVVTYSTLMECFGKTERVEMAYSLFEEMLVKG 577
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 59/124 (47%), Gaps = 3/124 (2%)
Query: 180 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 239
+LD L KD ++A ++F M+++ + YT ++ + K D+A +F +M + G
Sbjct: 244 LLDALAKD---EKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEG 300
Query: 240 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAK 299
++ N Y L+Q L K + A + M+E G PN T+ L+ E +
Sbjct: 301 LTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLD 360
Query: 300 GAIK 303
G ++
Sbjct: 361 GVVE 364
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 66/126 (52%), Gaps = 3/126 (2%)
Query: 163 EIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 219
E +KKM G+ + + +D +CK G +A+KL+ M+ + ++V Y V+
Sbjct: 210 EYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAI 269
Query: 220 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNV 279
+ + R+FR+M+ G PN ++ +++ LC+ R++DA+ EM + G P+
Sbjct: 270 GASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDS 329
Query: 280 TTFVDL 285
T++ L
Sbjct: 330 ITYMCL 335
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 78/151 (51%), Gaps = 6/151 (3%)
Query: 164 IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
+F++M+E G PN ++ LC+DG +++A ++ M ++G P+ + Y + ++
Sbjct: 281 VFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCL---FS 337
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
+ K + +F +M +G+ P +Y +L++ + LQ M E+G +P+
Sbjct: 338 RLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSA 397
Query: 281 TFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
+ +++ ++ ++ A+ + +IE+G +
Sbjct: 398 AYNAVIDALIQKGMLDMAREYEEEMIERGLS 428
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 3/131 (2%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E+ +F+ M GL PN V A++ G+ AL + G +++ G IP++V YT +
Sbjct: 205 ENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCL 264
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ Y ++ + AK +F M+ PN +Y L+ L +A E +M + G
Sbjct: 265 LNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGI 324
Query: 276 SPNVTTFVDLV 286
PNV + L+
Sbjct: 325 KPNVVSVCTLL 335
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 3/151 (1%)
Query: 158 PEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 214
P A E+F M++ PN V A++D +G + EA+++F M + G P +V
Sbjct: 274 PGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCT 333
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
++ +++ K + + QS GI+ N +Y + + L+ A M +
Sbjct: 334 LLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKK 393
Query: 275 HSPNVTTFVDLVEGFCKEQGIEEAKGAIKTL 305
+ TF L+ G C+ EA +K +
Sbjct: 394 VKADSVTFTILISGSCRMSKYPEAISYLKEM 424
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 33/160 (20%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
++L K G V EA +F M+ G P+++ YT+++ Y + K A +F +M++N
Sbjct: 438 SVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEAN 497
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIE-- 296
GI P++ + CS L AF + G NV +DL+ +E+ I
Sbjct: 498 GIEPDSIA----------CSALMRAFN------KGGQPSNVFVLMDLM----REKEIPFT 537
Query: 297 -----EAKGAIKTLIEKGFAVNEKAVKDFLNKKKPFSPSV 331
E A TL E A+ D + P+ PS+
Sbjct: 538 GAVFFEIFSACNTLQEWKRAI------DLIQMMDPYLPSL 571
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 90/194 (46%), Gaps = 3/194 (1%)
Query: 123 LDKFKLGFDNKAGNSSETNQSEEATKSSNSNQPAMPEDADEIFKKMKETGLIPNAV---A 179
L+K + FD + + + T S + Q +P+ A E F+KM G P+ V A
Sbjct: 191 LEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAA 250
Query: 180 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 239
M+D + G V AL L+ R + + V ++ ++ Y + D I+ +M++ G
Sbjct: 251 MIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALG 310
Query: 240 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAK 299
+ PN Y L+ + + R A +++ G +PN +T+ LV + + + ++A
Sbjct: 311 VKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDAL 370
Query: 300 GAIKTLIEKGFAVN 313
+ + EKG ++
Sbjct: 371 AIYREMKEKGLSLT 384
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 6/152 (3%)
Query: 164 IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
I+++MK G+ PN V ++D + + +A ++ + G P Y A+V Y
Sbjct: 302 IYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYG 361
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQD-AFEFCVEMLEAGHS-PN 278
+A DDA I+R+M+ G+S Y L+ +C +R D AFE +M P+
Sbjct: 362 RARYGDDALAIYREMKEKGLSLTVILYNTLL-SMCADNRYVDEAFEIFQDMKNCETCDPD 420
Query: 279 VTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
TF L+ + + EA+ A+ + E GF
Sbjct: 421 SWTFSSLITVYACSGRVSEAEAALLQMREAGF 452
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 73/140 (52%), Gaps = 3/140 (2%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A I+++M + PN + M+ K G + ++L+L+ M+++G P I +Y ++V
Sbjct: 277 EAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLV 336
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
T+ D+A ++ +K+ G+ P++ +Y +++ LC+ +L A M+ S
Sbjct: 337 YVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLS 396
Query: 277 PNVTTFVDLVEGFCKEQGIE 296
P V TF +E E+ +E
Sbjct: 397 PTVDTFHAFLEAVNFEKTLE 416
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 2/149 (1%)
Query: 163 EIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKA 222
+I K K T +L LC+ G +++A + F L +K ++ + ++ G+
Sbjct: 213 DIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEE-FMLASKKLFPVDVEGFNVILNGWCNI 271
Query: 223 HK-ADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTT 281
+AKRI+R+M + I+PN SY+ ++ K L D+ EM + G +P +
Sbjct: 272 WTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEV 331
Query: 282 FVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
+ LV +E +EA +K L E+G
Sbjct: 332 YNSLVYVLTREDCFDEAMKLMKKLNEEGL 360
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 66/140 (47%), Gaps = 3/140 (2%)
Query: 175 PNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRI 231
PN + ++ G C G +EA KL M ++ P+ + + ++ G K + ++ +
Sbjct: 235 PNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDL 294
Query: 232 FRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCK 291
+M+ G PN +Y ++ GL R +A E +M+ G P+ ++ +V G C+
Sbjct: 295 LERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCE 354
Query: 292 EQGIEEAKGAIKTLIEKGFA 311
+ + E ++ ++ GF
Sbjct: 355 TKSVVEMDWVLRQMVNHGFV 374
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 69/131 (52%)
Query: 180 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 239
++ GLC+ G ++ AL+L ++ + P ++ ++ ++ G+ K ++A ++ +M+
Sbjct: 208 LIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKER 267
Query: 240 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAK 299
I P+ ++ +L+ GL K R+++ + M G PN T+ +++ G ++ EAK
Sbjct: 268 IEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAK 327
Query: 300 GAIKTLIEKGF 310
+ +I G
Sbjct: 328 EMMSQMISWGM 338
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 65/132 (49%), Gaps = 3/132 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E+A ++ ++M++ + P+ + ++ GL K G V+E + L M+ KG P Y V
Sbjct: 254 EEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEV 313
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ G + +AK + +M S G+ P+ SY +V GLC+ + + +M+ G
Sbjct: 314 LYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGF 373
Query: 276 SPNVTTFVDLVE 287
P + +V+
Sbjct: 374 VPKTLMWWKVVQ 385
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 51/111 (45%)
Query: 188 GLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSY 247
G + A+++ M + G P + ++ A D+ +IF G+ +A
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCL 205
Query: 248 TVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
+L++GLC+ L+ A + E + PNV TF L+ GFC + EEA
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEA 256
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 75/157 (47%), Gaps = 6/157 (3%)
Query: 163 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 219
+++K+M G + N ++ CK+ + EAL +F M + G P +V + +++G
Sbjct: 204 KVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGA 263
Query: 220 TKAHKADDAKRIFRKM---QSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
K A ++ KM N +SPNA +Y ++ G CK RL A +M+++G
Sbjct: 264 CKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVD 323
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
N T+ LV+ + + +EA + KG VN
Sbjct: 324 CNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVN 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 63/125 (50%), Gaps = 3/125 (2%)
Query: 195 KLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGL 254
K++ M G + + + V+ + K K +A +F +M G+ PN S+ +++ G
Sbjct: 204 KVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGA 263
Query: 255 CKCSRLQDAFEFCVEM-LEAGH--SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
CK ++ A + +M + +G+ SPN T+ ++ GFCK ++ A+ +++ G
Sbjct: 264 CKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVD 323
Query: 312 VNEKA 316
NE+
Sbjct: 324 CNERT 328
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 77/154 (50%), Gaps = 9/154 (5%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
AD+I M GL +A++ ++DG K+G ++ AL+++ M + +VIY ++V
Sbjct: 450 ADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVN 509
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM--LEAGH 275
G +K A A+ + M+ I +Y L+ K +++A + +M +
Sbjct: 510 GLSKRGMAGAAEAVVNAMEIKDI----VTYNTLLNESLKTGNVEEADDILSKMQKQDGEK 565
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
S ++ TF ++ CK E+AK +K ++E+G
Sbjct: 566 SVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERG 599
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 67/135 (49%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
A++D + G EAL+L M KG + VIY ++V + A + R M S
Sbjct: 331 ALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSK 390
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
+ + F+ ++V+GLC+ +++A EF ++ E ++ L+ F +++ + A
Sbjct: 391 NMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACA 450
Query: 299 KGAIKTLIEKGFAVN 313
+ +++ +G +++
Sbjct: 451 DQILGSMLVQGLSLD 465
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 77/158 (48%), Gaps = 4/158 (2%)
Query: 157 MPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 213
+ E+A I +M++ G+ N + ++D K ++E LF MR+KG P Y
Sbjct: 359 LKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYN 418
Query: 214 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQD-AFEFCVEMLE 272
+++ Y + + D + + R+M+ G+ PN SYT L+ + ++ D A + + M +
Sbjct: 419 ILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKK 478
Query: 273 AGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
G P+ ++ L+ + E+A + + + ++G
Sbjct: 479 VGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGI 516
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 72/132 (54%), Gaps = 7/132 (5%)
Query: 163 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 219
EIF+KM E G+ + ++ C +GL +EAL + M +KG ++Y +++ Y
Sbjct: 330 EIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAY 389
Query: 220 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQ-DAFEFCV-EMLEAGHSP 277
K++ ++ + +F +M+ G+ P+A +Y +L+ + R+Q D E + EM + G P
Sbjct: 390 NKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYAR--RMQPDIVETLLREMEDLGLEP 447
Query: 278 NVTTFVDLVEGF 289
NV ++ L+ +
Sbjct: 448 NVKSYTCLISAY 459
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 4/141 (2%)
Query: 153 NQPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEI 209
N+ E+ + +F +M++ GL P+A ++D + L M + G P +
Sbjct: 390 NKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNV 449
Query: 210 VIYTAVVEGYTKAHKADD-AKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCV 268
YT ++ Y + K D A F +M+ G+ P++ SYT L+ + A+
Sbjct: 450 KSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFE 509
Query: 269 EMLEAGHSPNVTTFVDLVEGF 289
EM + G P+V T+ +++ F
Sbjct: 510 EMCKEGIKPSVETYTSVLDAF 530
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 66/136 (48%), Gaps = 3/136 (2%)
Query: 175 PNAVAMLDGLC-KDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFR 233
P A ++L L ++ + L L + +K ++ +Y A + G + + + DDA ++
Sbjct: 238 PRACSVLFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYE 297
Query: 234 KMQSNGISPNAFSYTVLVQGLCKCSR-LQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKE 292
M + P+ + +L+ L K R ++ +E +M E G + F LV+ FC E
Sbjct: 298 AMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDE 357
Query: 293 QGIEEAKGAIKTLIEK 308
G++E I+T +EK
Sbjct: 358 -GLKEEALVIQTEMEK 372
>AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr5:26952352-26955480 FORWARD LENGTH=798
Length = 798
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 83/171 (48%), Gaps = 19/171 (11%)
Query: 158 PEDADEIFKKM-KETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTI------- 206
P++A +IF +M + L P+ A + L + GL++E LK+ MR+K T
Sbjct: 271 PQEALQIFNQMLGDRQLYPDMAAYHCIAVTLGQAGLLKELLKVIERMRQKPTKLTKNLRQ 330
Query: 207 --------PEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCS 258
P++V+Y A++ + +F +++ NG+ PN +Y + ++ + +
Sbjct: 331 KNWDPVLEPDLVVYNAILNACVPTLQWKAVSWVFVELRKNGLRPNGATYGLAMEVMLESG 390
Query: 259 RLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
+ +F +M +G +P T+ LV +E IEEA A++ + +KG
Sbjct: 391 KFDRVHDFFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQKG 441
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 75/173 (43%), Gaps = 34/173 (19%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMRE-------------- 202
D ++ + MK +G+ PNAV +L LCK+G V A L M+E
Sbjct: 200 DGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKEPNDVTFNILISAYC 259
Query: 203 -----------------KGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAF 245
G +P++V T V+E + +A + +++S G +
Sbjct: 260 NEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVV 319
Query: 246 SYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
+ LV+G C +++ A F +EM G+ PNV T+ L+ G+C ++ A
Sbjct: 320 ACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSA 372
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 3/129 (2%)
Query: 164 IFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
+ +K G +P+ V + ++ LC +G V EAL++ + KG ++V +V+GY
Sbjct: 270 LLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYC 329
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
K A+R F +M+ G PN +Y +L+ G C L A + +M N
Sbjct: 330 ALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFA 389
Query: 281 TFVDLVEGF 289
TF L+ G
Sbjct: 390 TFNTLIRGL 398
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
EDA E KM++ L P AV L LC+ G + + + M +G +P I++ +
Sbjct: 442 EDALEFLLKMEK--LFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCL 499
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ Y++ K +++ + M + G P + ++ ++ G CK ++ + +F +M E G
Sbjct: 500 IHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGC 559
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
P+ ++ L+E C + I++A ++EK
Sbjct: 560 VPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIV 595
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 84/178 (47%), Gaps = 9/178 (5%)
Query: 162 DEIFKKMKE----TGLIPN---AVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 214
D +++ + E GL P+ V ++ G + L++ + + L+ + G P + ++ +
Sbjct: 93 DTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNS 152
Query: 215 VVEGYTKAHKADDAKRIF-RKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 273
+++ K D A+ F RKM ++GI + ++Y +L++GL +R+ D F+ M +
Sbjct: 153 ILDVLVK-EDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTS 211
Query: 274 GHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLNKKKPFSPSV 331
G +PN + L+ CK + A+ + + E + + N++K V
Sbjct: 212 GVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKEPNDVTFNILISAYCNEQKLIQSMV 269
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 69/145 (47%), Gaps = 7/145 (4%)
Query: 160 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A E+ ++++ G + VA ++ G C G ++ A + F M KG +P + Y ++
Sbjct: 301 EALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLI 360
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE---A 273
GY D A F M+++ I N ++ L++GL R D + +EM++
Sbjct: 361 AGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKI-LEMMQDSDT 419
Query: 274 GHSPNVTTFVDLVEGFCKEQGIEEA 298
H + + ++ GF KE E+A
Sbjct: 420 VHGARIDPYNCVIYGFYKENRWEDA 444
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 63/138 (45%), Gaps = 5/138 (3%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+D + +M G +P+ + ++ + G ++E+L+L M +G +P + AV
Sbjct: 475 DDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAV 534
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ G+ K K + + M G P+ SY L++ LC +Q A+ M+E
Sbjct: 535 IIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSI 594
Query: 276 SPNVTTFVDLVEGFCKEQ 293
P+ + + L+ FC Q
Sbjct: 595 VPDPSMWSSLM--FCLSQ 610
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 7/154 (4%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A F +M+ G +PN ++ G C G++ AL F M+ + ++
Sbjct: 337 AQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIR 396
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFS--YTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
G + + DD +I MQ + A Y ++ G K +R +DA EF ++M E
Sbjct: 397 GLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKM-EKLF 455
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
V L+ C++ G+++ K A +I +G
Sbjct: 456 PRAVDRSFKLIS-LCEKGGMDDLKTAYDQMIGEG 488
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 73/142 (51%), Gaps = 6/142 (4%)
Query: 150 SNSNQPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTI 206
S + + +DA+ + +M++ G+ P+A+ ++ G G ++AL + G M+EKG
Sbjct: 299 SGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVA 358
Query: 207 PEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFE- 265
P +V +TA+ G +K +A ++F KMQ G+ PNA + + L++ L S L E
Sbjct: 359 PNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEV 418
Query: 266 --FCVEMLEAGHSPNVTTFVDL 285
FC+ + T VD+
Sbjct: 419 HGFCLRKNLICDAYVATALVDM 440
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 56/109 (51%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
+++ GL L+++A L M ++G P+ + + ++ GY K + A + KM+
Sbjct: 296 SLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEK 355
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVE 287
G++PN S+T + G K ++A + ++M E G PN T L++
Sbjct: 356 GVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLK 404
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 10/145 (6%)
Query: 180 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 239
++D K G + A +F +M K IV + ++V G + A DA+ + +M+ G
Sbjct: 266 LIDMYIKTGYLPYARMVFDMMDAK----NIVAWNSLVSGLSYACLLKDAEALMIRMEKEG 321
Query: 240 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAK 299
I P+A ++ L G + + A + +M E G +PNV ++ + G C + G +
Sbjct: 322 IKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSG-CSKNG--NFR 378
Query: 300 GAIKTLI---EKGFAVNEKAVKDFL 321
A+K I E+G N + L
Sbjct: 379 NALKVFIKMQEEGVGPNAATMSTLL 403
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 65/146 (44%), Gaps = 3/146 (2%)
Query: 157 MPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 213
+ E A +FK MK G P+ ++ L LV EA ++ M + G P Y
Sbjct: 530 LHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYA 589
Query: 214 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 273
A++ Y + DA ++ M+ G+ PN Y L+ G + +++A ++ M E
Sbjct: 590 AMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEH 649
Query: 274 GHSPNVTTFVDLVEGFCKEQGIEEAK 299
G N L++ + K +EEA+
Sbjct: 650 GVQSNHIVLTSLIKAYSKVGCLEEAR 675
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 63/143 (44%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
M+ K L ++AL LF M+ +GT P+ Y ++ + D+A+RI +M +
Sbjct: 520 VMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDS 579
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
G P +Y ++ + L DA + M + G PN + L+ GF + +EEA
Sbjct: 580 GCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEA 639
Query: 299 KGAIKTLIEKGFAVNEKAVKDFL 321
+ + E G N + +
Sbjct: 640 IQYFRMMEEHGVQSNHIVLTSLI 662
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 5/157 (3%)
Query: 157 MPEDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 213
+ ++A I +M ++G P AM+ + GL+ +A+ L+ M + G P V+Y
Sbjct: 565 LVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYG 624
Query: 214 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 273
+++ G+ ++ ++A + FR M+ +G+ N T L++ K L++A +M ++
Sbjct: 625 SLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDS 684
Query: 274 GHSPNVTTFVDLVEGFCKEQGI-EEAKGAIKTLIEKG 309
P+V ++ C + GI EA+ L EKG
Sbjct: 685 EGGPDVAASNSML-SLCADLGIVSEAESIFNALREKG 720
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 63/138 (45%)
Query: 180 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 239
++D K G + +A LF M + G + V + ++ +A+ + +KM+ G
Sbjct: 311 LIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKG 370
Query: 240 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAK 299
ISP+ +Y +L+ ++ A E+ ++ + G P+ T ++ C+ + + E +
Sbjct: 371 ISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVE 430
Query: 300 GAIKTLIEKGFAVNEKAV 317
I + ++E +V
Sbjct: 431 AVIAEMDRNSIRIDEHSV 448
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 75/156 (48%), Gaps = 4/156 (2%)
Query: 159 EDADEIFKKM-KETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 214
++A+ ++ +M K G+ P+ M+ LC+ G + + M K P +
Sbjct: 163 KEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGL 222
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
+++G+ K K D+ +++ R M G+ +Y +++Q LCK + +A ++
Sbjct: 223 MIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCR 282
Query: 275 HSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
PN T+ L+ GFC E+ ++EA + ++ G+
Sbjct: 283 MRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGY 318
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 3/153 (1%)
Query: 159 EDADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++ ++ + M E G+ + M+ LCK EA L + P V Y+ +
Sbjct: 234 DEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLL 293
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ G+ D+A +F M NG P++ Y L+ LCK + A C E +E
Sbjct: 294 IHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNW 353
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
P+ + LV G ++EAK I + EK
Sbjct: 354 VPSFSVMKWLVNGLASRSKVDEAKELIAVVKEK 386
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 3/162 (1%)
Query: 164 IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
I +M+ + P A + M+DG K+ E K+ +M E G + Y +++
Sbjct: 204 IVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLC 263
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
K K+ +AK + + S + PN+ +Y++L+ G C L +A M+ G+ P+
Sbjct: 264 KRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSE 323
Query: 281 TFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
+ L+ CK E A + +EK + + +K +N
Sbjct: 324 CYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVN 365
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 74/163 (45%), Gaps = 10/163 (6%)
Query: 159 EDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEG 218
++A IF + +GL P+ V + + + + A KL+ M +G +P+ + Y +++ G
Sbjct: 31 DEAGNIFTNLLISGLQPD-VQTYNMMIRFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHG 89
Query: 219 YTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPN 278
K +K A+++ S + ++ L+ G CK +R++D EM G N
Sbjct: 90 LCKQNKLAQARKV---------SKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVAN 140
Query: 279 VTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFL 321
V T+ L+ GF + A + ++ G + +D L
Sbjct: 141 VITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDIL 183
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 70/151 (46%), Gaps = 15/151 (9%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A++++ +M GL+P+ + +M+ GLCK + +A K+ + ++
Sbjct: 64 AEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVS---------KSCSTFNTLIN 114
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
GY KA + D +F +M GI N +YT L+ G + A + EM+ G
Sbjct: 115 GYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYS 174
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
+ TF D++ C + E + A+ L++K
Sbjct: 175 SSITFRDILPQLCSRK---ELRKAVAMLLQK 202
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 196 LFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLC 255
+F +MRE + Y ++ G KA K D+A IF + +G+ P+ +Y +++
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI---- 56
Query: 256 KCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAK 299
+ S L A + EM+ G P+ T+ ++ G CK+ + +A+
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQAR 100
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 70/139 (50%), Gaps = 3/139 (2%)
Query: 168 MKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHK 224
MKE G P +++ K+ +++ L+ M + P +V YTA++ GY K
Sbjct: 880 MKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGK 939
Query: 225 ADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVD 284
++A FR M+ G SP+ +Y+ + LC+ + +DA + EML+ G +P+ F
Sbjct: 940 VEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRT 999
Query: 285 LVEGFCKEQGIEEAKGAIK 303
+ G +E + A+ A++
Sbjct: 1000 VFYGLNREGKHDLARIALQ 1018
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 76/149 (51%), Gaps = 3/149 (2%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
+++ GL + G +Q+AL M+E GT P + +YT+++ + K + + +KM+
Sbjct: 859 SIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGE 918
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
P+ +YT ++ G ++++A+ M E G SP+ T+ + C+ E+A
Sbjct: 919 SCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDA 978
Query: 299 KGAIKTLIEKGFA---VNEKAVKDFLNKK 324
+ +++KG A +N + V LN++
Sbjct: 979 LKLLSEMLDKGIAPSTINFRTVFYGLNRE 1007
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 3/102 (2%)
Query: 161 ADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A E F+ +K++G P ++ L K ++ LF M E G P+ V TAVV
Sbjct: 417 ALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVA 476
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSR 259
G+ ++ +A ++F M+ GI P SY++ V+ LC+ SR
Sbjct: 477 GHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSR 518
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 68/140 (48%), Gaps = 2/140 (1%)
Query: 160 DADEIFKKMKETGLIPNAV--AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
DA EI MK L + V ++ G + V +AL+ F ++++ G P + YT +++
Sbjct: 382 DALEIVDIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQ 441
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
K + + +F +M NGI P++ + T +V G +R+ +A++ M E G P
Sbjct: 442 HLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKP 501
Query: 278 NVTTFVDLVEGFCKEQGIEE 297
++ V+ C+ +E
Sbjct: 502 TWKSYSIFVKELCRSSRYDE 521
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 52/102 (50%)
Query: 195 KLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGL 254
+L M + G +I +T ++ Y KA K +F KM+ +G +A +Y ++++ L
Sbjct: 210 ELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSL 269
Query: 255 CKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIE 296
C R A EF EM+E G + + T+ L++ K + ++
Sbjct: 270 CIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVD 311
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 78/166 (46%), Gaps = 4/166 (2%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A E+ +++K + +A ++ GLC+ + +AL++ +M+ + + + +Y +
Sbjct: 346 KEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRR-KLDDSNVYGII 404
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ GY + + A F ++ +G P +YT ++Q L K + + EM+E G
Sbjct: 405 ISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGI 464
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFL 321
P+ +V G + + EA ++ EKG K+ F+
Sbjct: 465 EPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFV 510
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 71/167 (42%), Gaps = 4/167 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+DA + + G P VA + LC+ G ++EAL + ++ + Y ++
Sbjct: 802 KDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSI 860
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
V G + A M+ G P YT L+ K +L+ E C +M
Sbjct: 861 VHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESC 920
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLN 322
P+V T+ ++ G+ +EEA A + + E+G + + K F+N
Sbjct: 921 EPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFIN 967
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 81/155 (52%), Gaps = 7/155 (4%)
Query: 161 ADEIFKKMKETGLIPNAVAMLDGLCK---DGL-VQEALKLFGLMREKGTIPEIVIYTAVV 216
A EI+++M +G +P ++ + + GL + +A+++F R G + IYT ++
Sbjct: 793 ASEIYERMHTSG-VPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMI 851
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA-GH 275
Y K K +A +F +MQ GI P SY ++V+ +C SRL + ++ +E G
Sbjct: 852 MHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVK-ICATSRLHHEVDELLQAMERNGR 910
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
+++T++ L++ + + EA+ I + EKG
Sbjct: 911 CTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGI 945
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Query: 163 EIFKKMKETGLIPN---AVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 219
+++ +M E G+ PN ++ K G +EALK FG M+ G +PE V Y++V+
Sbjct: 279 DLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLS 338
Query: 220 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 270
KA + A ++ M+S GI P+ ++ ++ K A +M
Sbjct: 339 VKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADM 389
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 23/164 (14%)
Query: 159 EDADEIFKKM--------KETGLIPNAVA--------MLDGLCKDGLVQEALKLFGLMR- 201
E ++FKK+ E L+P A ++ G K+G V + ++ MR
Sbjct: 383 EGVVDVFKKLLPNSVDPSGEPPLLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRR 442
Query: 202 --EKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSR 259
++ + P+ V YT VV + A D A+++ +M G+ N +Y VL++G CK +
Sbjct: 443 QDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQ 502
Query: 260 LQDAFEFCVEMLE-AGHSPNVTTFVDLVEGFCKEQGIEEAKGAI 302
+ A + EM E AG P+V ++ +++G I+++ GA+
Sbjct: 503 IDRAEDLLREMTEDAGIEPDVVSYNIIIDGCIL---IDDSAGAL 543
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 5/158 (3%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTI-PEIVIYTAVV 216
A ++ +M G+ N + +L G CK + A L M E I P++V Y ++
Sbjct: 471 ARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIII 530
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEML-EAGH 275
+G + A F +M++ GI+P SYT L++ + + A EM+ +
Sbjct: 531 DGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRV 590
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
++ + LVEG+C+ IE+A+ + + E GF N
Sbjct: 591 KVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPN 628
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 5/133 (3%)
Query: 161 ADEIFKKMKE-TGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
A+++ ++M E G+ P+ V+ ++DG AL F MR +G P + YT ++
Sbjct: 506 AEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLM 565
Query: 217 EGYTKAHKADDAKRIFRKMQSN-GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ + + + A R+F +M ++ + + ++ +LV+G C+ ++DA M E G
Sbjct: 566 KAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGF 625
Query: 276 SPNVTTFVDLVEG 288
PNV T+ L G
Sbjct: 626 YPNVATYGSLANG 638
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 5/151 (3%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
+++ LCK +EA+ LFG M E G P+ Y ++ +A + + + KM+S
Sbjct: 327 VLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSA 386
Query: 239 GISP--NAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIE 296
G N Y ++ LC RL+ A M G P + T+ L+ C +
Sbjct: 387 GYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLT 446
Query: 297 EAKGAIKTLIEKGFAVNEKAVK---DFLNKK 324
A G K +KG AV+ K + F+ KK
Sbjct: 447 RANGLYKEAAKKGIAVSPKEYRVDPRFMKKK 477
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 67/136 (49%), Gaps = 6/136 (4%)
Query: 159 EDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEG 218
EDA +F +MKE +I + M+ GL ++G QEALKLF M+ GT P + V+
Sbjct: 310 EDALRVFNQMKERDVITWS-TMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFA 368
Query: 219 YTKAHKADDAKRIFRKMQS-NGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
+ A +D FR M+ GI P Y ++ L K +L DA + EM P
Sbjct: 369 CSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEM---ECEP 425
Query: 278 NVTTFVDLVEGFCKEQ 293
+ T+ L+ G C+ Q
Sbjct: 426 DAVTWRTLL-GACRVQ 440
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 64/124 (51%), Gaps = 5/124 (4%)
Query: 174 IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFR 233
+ N +++ LC V +A KL MR +G +P++V +T ++ GY + + + A ++F
Sbjct: 162 LTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFD 221
Query: 234 KMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEML-----EAGHSPNVTTFVDLVEG 288
+M+ GI PN+ + +VL+ G K ++ + E+ E S F +LV+
Sbjct: 222 EMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDS 281
Query: 289 FCKE 292
C+E
Sbjct: 282 MCRE 285
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 175 PNAVAM---LDGLCKDGLVQEALKLFG-LMREKGTIPEIVIYTAVVEGYTKAHKADDAKR 230
P+AV + + GL G +EAL + +M E P +V Y AV+ G K HK D+A
Sbjct: 481 PDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMS 540
Query: 231 IFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFC 290
+F +++ ++ ++ +Y +++ GLC +++ A +F +++ + + ++G C
Sbjct: 541 VFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLC 600
Query: 291 KEQGIEEAKGAIKTLIEKG 309
+ + +A + L + G
Sbjct: 601 QSGYLSDACHFLYDLADSG 619
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 4/141 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E D + + M E + P VA ++ GL K EA+ +FG + + + Y +
Sbjct: 501 EALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAII 560
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++G +K D AK+ + + +AF Y ++GLC+ L DA F ++ ++G
Sbjct: 561 IDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGA 620
Query: 276 SPNVTTFVDLVEGFCKEQGIE 296
PNV + + V C G++
Sbjct: 621 IPNVVCY-NTVIAECSRSGLK 640
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 71/150 (47%), Gaps = 4/150 (2%)
Query: 163 EIFKKMK---ETGLIPNAVA-MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEG 218
E+++ MK +T + A A ++D +C++G + ++ M ++ Y +++
Sbjct: 257 ELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDS 316
Query: 219 YTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPN 278
+ + A RI M+S G+ P SY ++ GLCK A++ E E P+
Sbjct: 317 LCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPS 376
Query: 279 VTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
T+ L+E CKE +A+ ++ ++ K
Sbjct: 377 EYTYKLLMESLCKELDTGKARNVLELMLRK 406
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 64/146 (43%), Gaps = 5/146 (3%)
Query: 158 PEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 214
P++A I + G P+++ +++ LC G EA + F L G IP+
Sbjct: 71 PDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNV 130
Query: 215 VVEGYTKAHKADDAKRIFRKMQS--NGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 272
++ + + ++ P+ +Y L+ LC R+ DA + +M
Sbjct: 131 IIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRN 190
Query: 273 AGHSPNVTTFVDLVEGFCKEQGIEEA 298
GH P+V TF L+ G+C+ + +E A
Sbjct: 191 RGHLPDVVTFTTLIGGYCEIRELEVA 216
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 2/113 (1%)
Query: 195 KLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGL 254
+L G +E +P + Y ++ ++ DA ++ M++ G P+ ++T L+ G
Sbjct: 150 RLIGFKKE--FVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGY 207
Query: 255 CKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIE 307
C+ L+ A + EM G PN T L+ GF K + +E + +K L E
Sbjct: 208 CEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWE 260
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
A L GLC+ G + +A + + G IP +V Y V+ +++ +A +I +M+ N
Sbjct: 594 AFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKN 653
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVE 269
G +P+A ++ +L +L D+ + VE
Sbjct: 654 GQAPDAVTWRIL-------DKLHDSMDLTVE 677
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 59/154 (38%), Gaps = 3/154 (1%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A I MK GL P A++ GLCKDG A +L E P Y ++E
Sbjct: 326 AARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLME 385
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
K A+ + M + Y + ++GLC + V ML+ P
Sbjct: 386 SLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRP 445
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFA 311
+ T ++ G CK +++A + ++ F
Sbjct: 446 DEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFC 479
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 87/189 (46%), Gaps = 9/189 (4%)
Query: 130 FDNKAGNSSETNQS---EEATKSSNSNQPAMPEDADEIFKKMKETGLIPNA---VAMLDG 183
F+ N S T S EE KS S++ E +I K+MK+ L + +++
Sbjct: 98 FNWARSNPSYTPTSMEYEELAKSLASHKKY--ESMWKILKQMKDLSLDISGETLCFIIEQ 155
Query: 184 LCKDGLVQEALKLF-GLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISP 242
K+G V +A++LF G+ + G + +Y +++ A + R+M G+ P
Sbjct: 156 YGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKP 215
Query: 243 NAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAI 302
+ +Y +LV G C ++++A EF EM G +P L+EG +E AK +
Sbjct: 216 DKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMV 275
Query: 303 KTLIEKGFA 311
+ + GF
Sbjct: 276 SKMTKGGFV 284
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 61/143 (42%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
++L LC + A L M KG P+ Y +V G+ A K +A+ +M
Sbjct: 187 SLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRR 246
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
G +P A +L++GL L+ A E +M + G P++ TF L+E K +E
Sbjct: 247 GFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFC 306
Query: 299 KGAIKTLIEKGFAVNEKAVKDFL 321
T + G V+ K +
Sbjct: 307 IEMYYTACKLGLCVDIDTYKTLI 329
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A E+ KM + G +P+ +++ + K G V+ ++++ + G +I Y +
Sbjct: 269 ESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTL 328
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ +K K D+A R+ +G P Y +++G+C+ DAF F +M H
Sbjct: 329 IPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAH 388
Query: 276 SPNVTTFVDLV 286
PN + L+
Sbjct: 389 PPNRPVYTMLI 399
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/143 (20%), Positives = 68/143 (47%), Gaps = 3/143 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A E +M G P A +++GL G ++ A ++ M + G +P+I + +
Sbjct: 234 KEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNIL 293
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+E +K+ + + ++ G+ + +Y L+ + K ++ +AF +E GH
Sbjct: 294 IEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGH 353
Query: 276 SPNVTTFVDLVEGFCKEQGIEEA 298
P + + +++G C+ ++A
Sbjct: 354 KPFPSLYAPIIKGMCRNGMFDDA 376
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 11/160 (6%)
Query: 157 MPEDADEIFKKMKETGLIPN---AVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 213
M A + ++M GL P+ +++G C G ++EA + M +G P
Sbjct: 197 MFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRD 256
Query: 214 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEML-- 271
++EG A + AK + KM G P+ ++ +L++ + K + EFC+EM
Sbjct: 257 LLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEV----EFCIEMYYT 312
Query: 272 --EAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
+ G ++ T+ L+ K I+EA + +E G
Sbjct: 313 ACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDG 352
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 74/148 (50%), Gaps = 3/148 (2%)
Query: 159 EDADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E+ ++I+ +M E + I + A L GL + +E + LF ++ P++ +TA+
Sbjct: 229 EEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAM 288
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++G+ K D+A +++++ NG P F + L+ +CK L+ A+E C E+
Sbjct: 289 IKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRL 348
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIK 303
+ ++V+ K +EA+ ++
Sbjct: 349 LVDEAVLQEVVDALVKGSKQDEAEEIVE 376
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 164 IFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFG-LMREKGTIPEIVIYTAVVEGYTKA 222
+F + T NA+ + + + E++ LF ++ +P +V Y ++ +
Sbjct: 172 VFSNTRPTVFTCNAI--IAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDE 229
Query: 223 HKADDAKRIFRKMQSNG-ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTT 281
D+A ++R + +N +P++ +Y L +GL + R+ DA EML G + + T
Sbjct: 230 GNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTV 289
Query: 282 FVDLVEGF 289
+ +L+ G+
Sbjct: 290 YNNLIRGY 297
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 3/148 (2%)
Query: 159 EDADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E +EI+ KM E + I A L GL + +E + LFG ++ G P++ + A+
Sbjct: 232 ELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAM 291
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ G K D+A+ ++++ +G P+ ++ +L+ +CK + A E E +
Sbjct: 292 IRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRY 351
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIK 303
TT LV+ K EEA+ +K
Sbjct: 352 LVGQTTLQQLVDELVKGSKREEAEEIVK 379
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 81/179 (45%), Gaps = 19/179 (10%)
Query: 164 IFKKMKETGLIPNAVAMLDGLCKDGL-----------VQEALK--------LFGLMREKG 204
+ K + E +P AVA+LD + GL + LK ++ M EK
Sbjct: 186 LIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKN 245
Query: 205 TIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAF 264
+I Y A + G K+ + +F +++++G+ P+ FS+ +++G ++ +A
Sbjct: 246 VAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAE 305
Query: 265 EFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLNK 323
+ E+++ G+ P+ TF L+ CK E A K K + V + ++ +++
Sbjct: 306 AWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDE 364
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 4/164 (2%)
Query: 161 ADEIFKKMKETGLIPNA--VAMLDGLC-KDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A + F M E G+ PN + ML GL K+ V+EA F MR+ G + E Y++++
Sbjct: 229 ASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCESA-YSSMIT 287
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
YT+ D A+ + M+ + + ++ V++ + +++ A V M AG SP
Sbjct: 288 IYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSP 347
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFL 321
N+ + L+ G+ K +E A+G L G +E + + +
Sbjct: 348 NIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMI 391
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 6/152 (3%)
Query: 157 MPEDADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 213
+ + A+E+ MK+ + + N + ML+ + G ++ A + M G P I+ Y
Sbjct: 294 LYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYN 353
Query: 214 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 273
++ GY K K + A+ +F ++ + G+ P+ SY +++G + ++A + E+
Sbjct: 354 TLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRC 413
Query: 274 GHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTL 305
G+ PN L+ + + GAIKT+
Sbjct: 414 GYKPNSFNLFTLIN---LQAKYGDRDGAIKTI 442
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 4/137 (2%)
Query: 161 ADEIF-KKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
A E+F +M + G PN+V +DG CK EAL+LF M + I T ++
Sbjct: 228 ATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLI 287
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
G A A+++F ++ G++P+ +Y L+ L KC + A + EM E G
Sbjct: 288 HGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIE 347
Query: 277 PNVTTFVDLVEGFCKEQ 293
P+ TF + G K +
Sbjct: 348 PDSVTFHSMFIGMMKSK 364
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 72/163 (44%), Gaps = 5/163 (3%)
Query: 161 ADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A ++F ++ + GL P+ A++ L K G V A+K+ M EKG P+ V + ++
Sbjct: 299 ARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFI 358
Query: 218 GYTKAHKA--DDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
G K+ + + ++KM+ + P + +L++ C + + MLE G+
Sbjct: 359 GMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGY 418
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVK 318
P+ L C + +A +E+G V+E +
Sbjct: 419 CPHGHALELLTTALCARRRANDAFECSWQTVERGRCVSEPVYR 461
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 80/164 (48%), Gaps = 6/164 (3%)
Query: 159 EDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEG 218
+ A +F++M + ++ + +M+ G ++GL EA+KLF M E+G P++ TAV+
Sbjct: 348 DSAKAVFREMSDRSVV-SYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNC 406
Query: 219 YTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPN 278
+ D+ KR+ ++ N + + F L+ KC +Q+A EM +
Sbjct: 407 CARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEM----RVKD 462
Query: 279 VTTFVDLVEGFCKEQGIEEAKGAIKTLI-EKGFAVNEKAVKDFL 321
+ ++ ++ G+ K EA L+ EK F+ +E+ V L
Sbjct: 463 IISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVL 506
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 4/139 (2%)
Query: 164 IFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIP-EIVIYTAVVEGY 219
I K+MKE P+ + ++LD L + GLV E L + M+E ++ I+ Y V+ G
Sbjct: 199 ILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGM 258
Query: 220 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNV 279
KA + D I+ +M GI P+ SYT ++ L + ++++ EM + P+V
Sbjct: 259 RKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSV 318
Query: 280 TTFVDLVEGFCKEQGIEEA 298
+ L++ K + A
Sbjct: 319 YVYRALIDCLKKSGDFQSA 337
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 159 EDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E+ D + K M++ ++ + ++DG G V+EA +L +M +K E +Y +
Sbjct: 263 EELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLI 322
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 270
+ GY++ + ++ +M S G++PN +Y VL+ GLCK ++ +A F E+
Sbjct: 323 MNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNEL 377
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 57/117 (48%)
Query: 199 LMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCS 258
LM ++ + ++ Y +++G+T K ++A+R+ M + ++ Y +++ G +
Sbjct: 271 LMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFG 330
Query: 259 RLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEK 315
++ E EM G +PN T+ L+ G CK + EA + L F ++E+
Sbjct: 331 LVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEE 387
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
Query: 192 EALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQS-NGISPNAFSYTVL 250
+A LF +M +G P I +YT+++ Y K+ D A M+S + P+ F++TVL
Sbjct: 162 QASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVL 221
Query: 251 VQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
+ CK R +EM G + T+ +++G+ K EE + + +IE G
Sbjct: 222 ISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDG 280
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 73/152 (48%), Gaps = 7/152 (4%)
Query: 167 KMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPE-----IVIYTAVVEGYTK 221
K++ + + N V L+ L ++G EALKLF ++++ P + + +V GY
Sbjct: 305 KVRMSAMAYNYV--LEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCA 362
Query: 222 AHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTT 281
K ++A +FR+M SP+ S+ L+ LC L +A + EM E P+ T
Sbjct: 363 GGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYT 422
Query: 282 FVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
+ L++ KE I+E KT++E N
Sbjct: 423 YGLLMDTCFKEGKIDEGAAYYKTMVESNLRPN 454
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 69/152 (45%), Gaps = 3/152 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A E+F+ M G+ P+ ++ L + + MRE G + + + Y AV
Sbjct: 522 EKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAV 581
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ + K + + A+ ++++M I P+ Y VL+ +Q A + M EAG
Sbjct: 582 ISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGI 641
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIE 307
N + L++ + K ++EA+ + L++
Sbjct: 642 PGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQ 673
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 66/136 (48%), Gaps = 1/136 (0%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
M+D K G ++EA + F M E+G +P V + ++ Y + + + + M+ +
Sbjct: 303 TMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLH 362
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
+P+ +Y +L+ K + ++ A + EM + G P+ ++ L+ F +EEA
Sbjct: 363 -CAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEA 421
Query: 299 KGAIKTLIEKGFAVNE 314
+G I + + ++E
Sbjct: 422 EGLIAEMDDDNVEIDE 437
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 76/153 (49%), Gaps = 5/153 (3%)
Query: 150 SNSNQPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGL-MREKGT 205
S + + M ++F +M +GL P+ + ++ K G EA K+ + G
Sbjct: 91 SGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGL 150
Query: 206 IPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFE 265
+P I Y +++ K+ D+A +F+ ++S + P +Y +L+ GLCK R+
Sbjct: 151 VPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDW 209
Query: 266 FCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
E+ ++G++PN T+ +++ + K + IE+
Sbjct: 210 MMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKG 242
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%)
Query: 204 GTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDA 263
G +P+++ Y +++GYT+ D+A + R+M+ GI P+ +Y L+ G K L
Sbjct: 43 GVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRV 102
Query: 264 FEFCVEMLEAGHSPNVTTFVDLVEGFCK 291
+ EML +G SP++ ++ L+ + K
Sbjct: 103 LQLFDEMLHSGLSPDMWSYNTLMSCYFK 130
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 4/151 (2%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A+ + G++P+ + ++ G + + EA + MRE G P++ Y ++
Sbjct: 30 ERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSL 89
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE-AG 274
+ G K + ++F +M +G+SP+ +SY L+ K R +AF+ E + AG
Sbjct: 90 ISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAG 149
Query: 275 HSPNVTTFVDLVEGFCKEQGIEEAKGAIKTL 305
P + T+ L++ CK + A K L
Sbjct: 150 LVPGIDTYNILLDALCKSGHTDNAIELFKHL 180
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 80/156 (51%), Gaps = 5/156 (3%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A E+FK +K + + P + +++GLCK V + +++ G P V YT +
Sbjct: 171 DNAIELFKHLK-SRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTM 229
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG- 274
++ Y K + + ++F KM+ G + + F+ +V L K R ++A+E E++ +G
Sbjct: 230 LKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGT 289
Query: 275 HSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
S ++ ++ L+ + K+ ++ ++ + KG
Sbjct: 290 RSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGL 325
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 4/144 (2%)
Query: 159 EDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPE-IVIYTA 214
E ++F KMK+ G + A++ L K G +EA + + GT + IV Y
Sbjct: 240 EKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNT 299
Query: 215 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
++ Y K D + +++ G+ P+ +++T++V GL A + + E G
Sbjct: 300 LLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMG 359
Query: 275 HSPNVTTFVDLVEGFCKEQGIEEA 298
P+V T L++G CK ++ A
Sbjct: 360 MQPSVVTCNCLIDGLCKAGHVDRA 383
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 2/153 (1%)
Query: 159 EDADEIF-KKMKETGLIPNAVAM-LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
E A+ +F + +E G A+ M L+G C G V EA + + + P++V Y ++
Sbjct: 230 EFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMI 289
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
TK K A ++R M +P+ ++ LC R+ +A E E+ E G
Sbjct: 290 NALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPD 349
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
PNV T+ L++ CK + E+ ++ + KG
Sbjct: 350 PNVVTYNSLLKHLCKIRRTEKVWELVEEMELKG 382
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 68/134 (50%), Gaps = 5/134 (3%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+A +K + + P+ V+ M++ L K G + +A++L+ M + P++ I V
Sbjct: 264 HEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNV 323
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM-LEAG 274
++ + +A +FR++ G PN +Y L++ LCK R + +E EM L+ G
Sbjct: 324 IDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGG 383
Query: 275 H-SPNVTTFVDLVE 287
SPN TF L++
Sbjct: 384 SCSPNDVTFSYLLK 397
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 2/113 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEG 218
E A E+F M+E + + A L+GL +G ++ L+LF LM++ G P V + +V+ G
Sbjct: 292 EKAMEVFWGMEEKNVYTWSSA-LNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRG 350
Query: 219 YTKAHKADDAKRIFRKMQSN-GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 270
+ D+ +R F M++ GI P Y LV + RL+DA +M
Sbjct: 351 CSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQM 403
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 5/159 (3%)
Query: 159 EDADEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A + ++K + + PNA + G CK V+EAL M+ G P ++ YT +
Sbjct: 207 EQARVVLLQLK-SHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTI 265
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ Y + + + +M++NG PN+ +YT ++ L ++A M +G
Sbjct: 266 IRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGC 325
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKT-LIEKGFAVN 313
P+ + L+ + +EEA+ + + E G ++N
Sbjct: 326 KPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSIN 364
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 73/153 (47%), Gaps = 7/153 (4%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E+A ++MK G P ++ ++ C+ + ++ M G+ P + YT +
Sbjct: 241 EEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTI 300
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFE-FCVEMLEAG 274
+ + ++A R+ +M+ +G P++ Y L+ L + RL++A F VEM E G
Sbjct: 301 MSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELG 360
Query: 275 HSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIE 307
S N +T+ ++ +C +E AI+ L E
Sbjct: 361 VSINTSTYNSMIAMYCHH---DEEDKAIELLKE 390
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 5/159 (3%)
Query: 159 EDADEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E A + ++K + + PNA + G CK V+EAL M+ G P ++ YT +
Sbjct: 207 EQARVVLLQLK-SHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTI 265
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
+ Y + + + +M++NG PN+ +YT ++ L ++A M +G
Sbjct: 266 IRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGC 325
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKT-LIEKGFAVN 313
P+ + L+ + +EEA+ + + E G ++N
Sbjct: 326 KPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSIN 364
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 73/153 (47%), Gaps = 7/153 (4%)
Query: 159 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E+A ++MK G P ++ ++ C+ + ++ M G+ P + YT +
Sbjct: 241 EEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTI 300
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFE-FCVEMLEAG 274
+ + ++A R+ +M+ +G P++ Y L+ L + RL++A F VEM E G
Sbjct: 301 MSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELG 360
Query: 275 HSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIE 307
S N +T+ ++ +C +E AI+ L E
Sbjct: 361 VSINTSTYNSMIAMYCHH---DEEDKAIELLKE 390
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 53/110 (48%)
Query: 196 LFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLC 255
L LM + P+ + Y V++G+ A D A+R++ M G PN Y ++ LC
Sbjct: 269 LLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLC 328
Query: 256 KCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTL 305
K A+ C + + PN+ T L++G K+ +++AK ++ +
Sbjct: 329 KAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIMELV 378
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 3/158 (1%)
Query: 160 DADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
+A +F +MKE + M+D + +V+EA +LF +R+ P +V Y ++
Sbjct: 313 EALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTIL 372
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
Y +A +A +FR MQ I N +Y +++ K + A EM G
Sbjct: 373 RVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIE 432
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNE 314
PN T+ ++ + K ++ A + L G +++
Sbjct: 433 PNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQ 470
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 62/126 (49%), Gaps = 3/126 (2%)
Query: 173 LIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIF 232
L N + + LC +A+ +F ++ G P++V Y +++ Y KA +A+ +
Sbjct: 227 LYSNLIELSRRLCD---YSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLI 283
Query: 233 RKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKE 292
++M G+ PN SY+ L+ + + +A EM E + ++TT +++ + +
Sbjct: 284 KEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQL 343
Query: 293 QGIEEA 298
++EA
Sbjct: 344 DMVKEA 349
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 70/156 (44%), Gaps = 3/156 (1%)
Query: 161 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A +F +M++ L P+ ++ K+G+ AL M + ++V+Y+ ++E
Sbjct: 174 AHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIE 233
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
+ A IF +++ +GI+P+ +Y ++ K ++A EM EAG P
Sbjct: 234 LSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLP 293
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVN 313
N ++ L+ + + EA + E A++
Sbjct: 294 NTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALD 329
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 85/173 (49%), Gaps = 5/173 (2%)
Query: 157 MPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 213
+ E+A +F K+KE + P+ + M+ G C G + EA KL+ LM ++G +I
Sbjct: 196 LVEEAKFVFIKLKEF-IKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGK 254
Query: 214 AVVEGYTKAHKADDAKRIFRKMQS-NGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 272
++E K ++ D+A ++F M S G + Y V++ LCK R+ A + EM E
Sbjct: 255 KIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRE 314
Query: 273 AGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLNKKK 325
G + T+ L+ G ++ + EA G ++ + ++ +K + K+
Sbjct: 315 RGVYVDNLTWASLIYGLLVKRRVVEAYGLVEGVENPDISIYHGLIKGLVKIKR 367
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 88/200 (44%), Gaps = 7/200 (3%)
Query: 130 FDNKAGNSSETNQSEEATKSSNSNQPAMPEDADEIFKKMKETGLIPN---AVAMLDGLCK 186
D K+ N+S ++ S+ + N ED + I KKM + G+ P+ A A++ K
Sbjct: 375 LDEKSFNASISDYSKLIHIHAKENHI---EDVERILKKMSQNGIFPDILTATALVHMYSK 431
Query: 187 DGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFS 246
G + A + F ++ G P+ IY A++ GY A K +R+ ++MQ+ + +
Sbjct: 432 SGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEV 491
Query: 247 YTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP-NVTTFVDLVEGFCKEQGIEEAKGAIKTL 305
Y L++ + A M A P + + VE + K +++AK +
Sbjct: 492 YMALLRAYAQMGDANGAAGISSSMQYASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEM 551
Query: 306 IEKGFAVNEKAVKDFLNKKK 325
+ G ++K + + + K
Sbjct: 552 RKLGHKPDDKCIANLVRAYK 571
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Query: 181 LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGI 240
++ K G V +A F MR+ G P+ +V Y + D A R+ +++ +GI
Sbjct: 532 VEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEKDGI 591
Query: 241 SPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKG 300
+YTVLV + +++A + V++ + G +P V L C G+ K
Sbjct: 592 EIGVITYTVLVDWMANLGLIEEAEQLLVKISQLGEAPPFELQVSLC---CMYSGVRNEKK 648
Query: 301 AIKTL 305
++ L
Sbjct: 649 TLQAL 653
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 10/160 (6%)
Query: 161 ADEIFKKMKETGLIPNAVA----------MLDGLCKDGLVQEALKLFGLMREKGTIPEIV 210
A EI++ + + G PN ++ +L K G+ + ++L M +KG P+
Sbjct: 400 ALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRR 459
Query: 211 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 270
+ AV+ +KA + A +IF+ M NG P SY L+ L K +AF M
Sbjct: 460 HWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHM 519
Query: 271 LEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
++ G PN+ + + +Q +K + KG
Sbjct: 520 IKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGI 559
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 3/132 (2%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A +IFK M + G P + A+L L K L EA +++ M + G P + YT +
Sbjct: 477 AIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMAS 536
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
T K + + ++M S GI P+ ++ ++ G + A+E+ M P
Sbjct: 537 VLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEP 596
Query: 278 NVTTFVDLVEGF 289
N T+ L+E
Sbjct: 597 NEITYEMLIEAL 608
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:4962293-4965976 FORWARD LENGTH=1227
Length = 1227
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 86/193 (44%), Gaps = 37/193 (19%)
Query: 168 MKETGLIPN---AVAMLDGLCKDGLVQEALKLFGLMREKGT----------IPEIVI--- 211
M G+ PN A+ LC +G V++AL L+ +M KG I E +I
Sbjct: 970 MISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKG 1029
Query: 212 ---------------------YTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVL 250
Y +++ + D A + M N P + SY +
Sbjct: 1030 EIPKAEDFLTRVTRNGMMAPNYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSV 1089
Query: 251 VQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
+ GL + ++L A +F EM+E G SP+++T+ LV FC+ + E++ IK+++ G
Sbjct: 1090 INGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGE 1149
Query: 311 AVNEKAVKDFLNK 323
+ +++ K +++
Sbjct: 1150 SPSQEMFKTVIDR 1162
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 8/119 (6%)
Query: 190 VQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKAD--DAKRIFRKMQSNGISPNAFSY 247
++E++ L + K + + + Y+ VV Y KA + D A+++F +M G S N+F Y
Sbjct: 285 IEESMSLLKRLLMKNMVVDTIGYSIVV--YAKAKEGDLVSARKVFDEMLQRGFSANSFVY 342
Query: 248 TVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCK----EQGIEEAKGAI 302
TV V+ C+ +++A EM E+G SP TF L+ GF + E+G+E + +
Sbjct: 343 TVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMV 401
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 64/136 (47%)
Query: 186 KDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAF 245
K+G + A K+F M ++G +YT V + +A+R+ +M+ +G+SP
Sbjct: 316 KEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDE 375
Query: 246 SYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTL 305
++ L+ G + + E+C M+ G P+ + F ++V+ K + + A +
Sbjct: 376 TFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKS 435
Query: 306 IEKGFAVNEKAVKDFL 321
I+KGF +E +
Sbjct: 436 IDKGFVPDEHTYSHLI 451
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 75/169 (44%), Gaps = 7/169 (4%)
Query: 159 EDADEIFKKMKETGLIP---NAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
++A+ + +M+E+G+ P ++ G + G ++ L+ +M +G +P + +
Sbjct: 356 KEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEM 415
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
V+ +K + A I K G P+ +Y+ L++G + + + A + EM
Sbjct: 416 VKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKM 475
Query: 276 SPNVTTFVDLVEGFCK----EQGIEEAKGAIKTLIEKGFAVNEKAVKDF 320
SP F L+ G C E G + K K LIE + + +K F
Sbjct: 476 SPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAF 524
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 16/142 (11%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
A + K+ + G I V ++L K G + EA LF +M E+ IV A++
Sbjct: 61 ARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPER----NIVTCNAMLT 116
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
GY K + ++A +FR+M N + S+TV++ LC R +DA E EM E
Sbjct: 117 GYVKCRRMNEAWTLFREMPKNVV-----SWTVMLTALCDDGRSEDAVELFDEMPE----R 167
Query: 278 NVTTFVDLVEGFCKEQGIEEAK 299
NV ++ LV G + +E+AK
Sbjct: 168 NVVSWNTLVTGLIRNGDMEKAK 189
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 74/140 (52%), Gaps = 13/140 (9%)
Query: 159 EDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEG 218
EDA E+F +M E ++ + ++ GL ++G +++A ++F M + ++V + A+++G
Sbjct: 155 EDAVELFDEMPERNVV-SWNTLVTGLIRNGDMEKAKQVFDAMPSR----DVVSWNAMIKG 209
Query: 219 YTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPN 278
Y + ++AK +F M N ++T +V G C+ +++A+ EM E N
Sbjct: 210 YIENDGMEEAKLLFGDMSEK----NVVTWTSMVYGYCRYGDVREAYRLFCEMPE----RN 261
Query: 279 VTTFVDLVEGFCKEQGIEEA 298
+ ++ ++ GF + EA
Sbjct: 262 IVSWTAMISGFAWNELYREA 281
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 5/116 (4%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
++D K G++ EA +F M ++ ++V + A+V GY++ + +DA R+F KMQ
Sbjct: 269 CLVDMYAKCGMMDEANTVFSNM----SVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEE 324
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQG 294
I + +++ + G + +A C +ML +G PN T + ++ G C G
Sbjct: 325 KIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSG-CASVG 379
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 76/156 (48%), Gaps = 8/156 (5%)
Query: 157 MPEDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
M ++A+ +F M ++ + AM+ G + G ++A++LF M+E+ ++V ++A +
Sbjct: 279 MMDEANTVFSNMSVKDVV-SWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAI 337
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQD-------AFEFCVE 269
GY + +A + R+M S+GI PN + ++ G L A ++ ++
Sbjct: 338 SGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPID 397
Query: 270 MLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTL 305
+ + GH L++ + K + ++ A+ +L
Sbjct: 398 LRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSL 433
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 75/153 (49%), Gaps = 19/153 (12%)
Query: 161 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 217
AD++F ++ GL P+ ++GLCK ++ ALK+ M + G+ P +V Y +++
Sbjct: 305 ADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIK 364
Query: 218 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 277
KA AK ++++M++NG++ N+ ++ +++ + + A +LE +
Sbjct: 365 ALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAH----GLLEEAFNM 420
Query: 278 NVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGF 310
NV F K IEE I L EKG
Sbjct: 421 NV---------FVKSSRIEE---VISRLCEKGL 441
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 62/126 (49%)
Query: 184 LCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPN 243
L + G +E + + M+ P++V YT V++G A ++F ++ G++P+
Sbjct: 261 LVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPD 320
Query: 244 AFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIK 303
++Y V + GLCK + ++ A + M + G PNV T+ L++ K + AK K
Sbjct: 321 VYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWK 380
Query: 304 TLIEKG 309
+ G
Sbjct: 381 EMETNG 386
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 1/114 (0%)
Query: 196 LFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLC 255
++ +M G P + +++ Y K K DA F ++ G + Y V++ GLC
Sbjct: 625 VYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQGKTKKRL-YQVMIVGLC 683
Query: 256 KCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 309
K ++L DA F EM G P++ + ++ C E+ +EA G + + G
Sbjct: 684 KANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFRKSG 737
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 35/198 (17%)
Query: 154 QPAMPEDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 213
Q ++A +F++M ++ + AM+DGL K+G V EA +LF M E+ I+ +
Sbjct: 183 QRGRIDEAMNLFERMPRRDVV-SWTAMVDGLAKNGKVDEARRLFDCMPERN----IISWN 237
Query: 214 AVVEGYTKAHKADDAKRIFRKM----------------------QSNGI-----SPNAFS 246
A++ GY + ++ D+A ++F+ M ++ G+ N S
Sbjct: 238 AMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVIS 297
Query: 247 YTVLVQGLCKCSRLQDAFEFCVEMLEAGH-SPNVTTFVDLVEGFCKEQGIEEAKGAIKTL 305
+T ++ G + ++A +ML G PNV T+V ++ G+ E + I L
Sbjct: 298 WTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQ-QIHQL 356
Query: 306 IEKGFAV-NEKAVKDFLN 322
I K NE LN
Sbjct: 357 ISKSVHQKNEIVTSALLN 374
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 82/165 (49%), Gaps = 13/165 (7%)
Query: 161 ADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
A+ +F++M E ++ + M+DG + G + +AL+LF M E+ IV + ++V+
Sbjct: 128 AEMLFQEMPERNVV-SWNTMIDGYAQSGRIDKALELFDEMPERN----IVSWNSMVKALV 182
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVT 280
+ + D+A +F +M + S+T +V GL K ++ +A + + N+
Sbjct: 183 QRGRIDEAMNLFERMPRRDV----VSWTAMVDGLAKNGKVDEA----RRLFDCMPERNII 234
Query: 281 TFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLNKKK 325
++ ++ G+ + I+EA + + E+ FA + F+ ++
Sbjct: 235 SWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNRE 279
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 174 IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFR 233
+P ++ LCK G + EA KLF + E+ ++V +T V+ GY K +A+ +F
Sbjct: 46 VPQPEWLIGELCKVGKIAEARKLFDGLPER----DVVTWTHVITGYIKLGDMREARELFD 101
Query: 234 KMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQ 293
++ S N ++T +V G + +L A EM E NV ++ +++G+ +
Sbjct: 102 RVDSR---KNVVTWTAMVSGYLRSKQLSIAEMLFQEMPE----RNVVSWNTMIDGYAQSG 154
Query: 294 GIEEAKGAIKTLIEKGFAVNEKAVKDFLNKKK 325
I++A + E+ VK + + +
Sbjct: 155 RIDKALELFDEMPERNIVSWNSMVKALVQRGR 186
>AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16811051-16812106 FORWARD
LENGTH=351
Length = 351
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 65/135 (48%), Gaps = 4/135 (2%)
Query: 180 MLDGLCKDGLVQEALKLFGLMR--EKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQS 237
++ LCK G + +AL + G M G P Y ++ T+ +K ++A R+ M+S
Sbjct: 113 LISRLCKLGRIDDALIVIGDMSNGRLGLTPST--YHPILCSLTRKYKIEEAWRVVESMRS 170
Query: 238 NGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEE 297
+S + +Y + C L+ A E ++ E G+SP+ ++ LV G C+ +E
Sbjct: 171 KSVSMDVTAYNYFLTSHCYDGELESASEVMRKIEEDGNSPDSRSYDALVLGACRAGKVEA 230
Query: 298 AKGAIKTLIEKGFAV 312
A ++ + E G V
Sbjct: 231 AMAILRRMEEDGVTV 245
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 5/130 (3%)
Query: 172 GLIPNAVA-MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKR 230
GL P+ +L L + ++EA ++ MR K ++ Y + + + + A
Sbjct: 139 GLTPSTYHPILCSLTRKYKIEEAWRVVESMRSKSVSMDVTAYNYFLTSHCYDGELESASE 198
Query: 231 IFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG----HSPNVTTFVDLV 286
+ RK++ +G SP++ SY LV G C+ +++ A M E G +S + LV
Sbjct: 199 VMRKIEEDGNSPDSRSYDALVLGACRAGKVEAAMAILRRMEEDGVTVLYSTHAHVITGLV 258
Query: 287 EGFCKEQGIE 296
EG G+E
Sbjct: 259 EGGYYALGLE 268
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 72/151 (47%), Gaps = 8/151 (5%)
Query: 160 DADEIFKK--MKET-GLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
DA +F + +KET L+ NA+ + GL G ++E+L+LF MRE P+ + + ++
Sbjct: 294 DAWSVFYRASVKETDALMWNAI--IGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLL 351
Query: 217 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 276
+ +A F+ ++ +G P + Y +V L + ++DA +F EM
Sbjct: 352 AACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEM---PIK 408
Query: 277 PNVTTFVDLVEGFCKEQGIEEAKGAIKTLIE 307
P + L+ G +E A+ K LIE
Sbjct: 409 PTGSMLGALLNGCINHGNLELAETVGKKLIE 439
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 5/134 (3%)
Query: 161 ADEIFKKMKETGLIP----NAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 216
A E+F ++E + +L L K G A KLF M E+G P + +YTA++
Sbjct: 107 ALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALL 166
Query: 217 EGYTKAHKADDAKRIFRKMQS-NGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
YT+++ DDA I KM+S P+ F+Y+ L++ S+ EM E
Sbjct: 167 AAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLI 226
Query: 276 SPNVTTFVDLVEGF 289
+PN T ++ G+
Sbjct: 227 TPNTVTQNIVLSGY 240
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 70/145 (48%), Gaps = 10/145 (6%)
Query: 163 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 219
E+ +MK GL PN + ++D G V+ A+++ M GT P++V YT ++
Sbjct: 545 ELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKIC 604
Query: 220 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCV----EMLEAGH 275
+ A +F +M+ I PN +Y L++ K L + + C+ +M AG+
Sbjct: 605 AENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLKARSKYGSLLEVRQ-CLAIYQDMRNAGY 663
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKG 300
PN +L+E +C +G+ + G
Sbjct: 664 KPNDHFLKELIEEWC--EGVIQENG 686
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 1/127 (0%)
Query: 160 DADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 219
+A ++F + E L+ AM+ G + EAL L M+ G P+++ + A++ G+
Sbjct: 170 NARKVFSDLGEQDLVVFN-AMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGF 228
Query: 220 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNV 279
+ + I M +G P+ S+T ++ GL + + AF+ +ML G PN
Sbjct: 229 SHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNS 288
Query: 280 TTFVDLV 286
T + L+
Sbjct: 289 ATIITLL 295
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 66/143 (46%), Gaps = 4/143 (2%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
+++D K G V A K+F + E+ ++V++ A++ GY +AD+A + + M+
Sbjct: 157 SLIDMYSKFGEVGNARKVFSDLGEQ----DLVVFNAMISGYANNSQADEALNLVKDMKLL 212
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
GI P+ ++ L+ G + E M G+ P+V ++ ++ G E+A
Sbjct: 213 GIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKA 272
Query: 299 KGAIKTLIEKGFAVNEKAVKDFL 321
A K ++ G N + L
Sbjct: 273 FDAFKQMLTHGLYPNSATIITLL 295
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 14/160 (8%)
Query: 159 EDADEIFKKMKETGLIPNAV---AMLDGLCK-------DGLVQEALKLFGLMREKGTIPE 208
++A + + MK G+ P+ ++L LC+ GLV EAL + MR P
Sbjct: 225 KEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPT 284
Query: 209 IVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCV 268
+ Y ++ + + ++ +I +M+ +G P+ SY +V+ L R +
Sbjct: 285 SMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVD 344
Query: 269 EMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
EM+E G P + DL+ C G+E A++ L EK
Sbjct: 345 EMIERGFRPERKFYYDLIGVLC---GVERVNFALQ-LFEK 380
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 7/151 (4%)
Query: 139 ETNQSEEATKSSNSNQPAMPEDADEIFKKMKETGLIPN---AVAMLDGLCKDGLVQEALK 195
E N T + +Q E A + +M E GL PN A+L K G + ++
Sbjct: 255 EKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIR 314
Query: 196 LFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLC 255
+ G + + G + I TA+V+ Y K + D A +F M I S+T ++QG
Sbjct: 315 IHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDI----LSWTAMIQGWA 370
Query: 256 KCSRLQDAFEFCVEMLEAGHSPNVTTFVDLV 286
R A + +M+ +G P+ F+ ++
Sbjct: 371 VHGRFHQAIQCFRQMMYSGEKPDEVVFLAVL 401
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 8/145 (5%)
Query: 178 VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQS 237
++++D K G ++ A ++F ++ I+I+ ++ GY +A A +FR M
Sbjct: 165 LSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPE 224
Query: 238 NGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEE 297
N+ S++ L++G L A ++ E NV ++ L+ GF + E
Sbjct: 225 R----NSGSWSTLIKGYVDSGELNRA----KQLFELMPEKNVVSWTTLINGFSQTGDYET 276
Query: 298 AKGAIKTLIEKGFAVNEKAVKDFLN 322
A ++EKG NE + L+
Sbjct: 277 AISTYFEMLEKGLKPNEYTIAAVLS 301
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
AM+ G +G+ EA LF M EK P +V +T ++ Y+ + + + F M+ +
Sbjct: 402 AMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDH 461
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 270
+ P+A Y ++V L + RL++A+E M
Sbjct: 462 NLEPSADHYGIMVDMLGRAGRLEEAYELIKSM 493
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 9/156 (5%)
Query: 159 EDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEG 218
E A E+F M E + + AM+ G + G +++A F + +G +V +TA++ G
Sbjct: 172 EKARELFYSMMEKNEV-SWNAMISGYIECGDLEKASHFFKVAPVRG----VVAWTAMITG 226
Query: 219 YTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPN 278
Y KA K + A+ +F+ M N N ++ ++ G + SR +D + MLE G PN
Sbjct: 227 YMKAKKVELAEAMFKDMTVN---KNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPN 283
Query: 279 VTTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNE 314
+ + G C E + I ++ K N+
Sbjct: 284 SSGLSSALLG-CSELSALQLGRQIHQIVSKSTLCND 318
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 75/156 (48%), Gaps = 11/156 (7%)
Query: 159 EDADEIFKKMKE-------TGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVI 211
E A ++F+ ++E G+ + ML G CK ++A +LF M +G + +
Sbjct: 131 ESAIQVFELLREQLWYKPNVGIYVKLIVML-GKCKQP--EKAHELFQEMINEGCVVNHEV 187
Query: 212 YTAVVEGYTKAHKADDAKRIFRKMQ-SNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 270
YTA+V Y+++ + D A + +M+ S+ P+ +Y++L++ + + +M
Sbjct: 188 YTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDM 247
Query: 271 LEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLI 306
G PN T+ L++ + K + E + + ++
Sbjct: 248 RRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQML 283
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGL-MREKGTIPEIVIYTAV 215
+ +E+ M+ G P A + LC+ G ++EA+ + M + +P + +Y +
Sbjct: 316 EGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVL 375
Query: 216 VEGYTKAHKADDAKRIFRKMQSN-GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
++G K+ +A +KM N +Y LV GLC+ + +A + EML
Sbjct: 376 IKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKS 435
Query: 275 HSPNVTTFVDLVEGFC 290
H P V T+ +++G C
Sbjct: 436 HFPGVETYHMMIKGLC 451
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 13/183 (7%)
Query: 163 EIFKKMKETGLIPNAVAMLDG-------LCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E K++ LI A+ LD L ++G + E ++ MR KG P IY A
Sbjct: 280 ERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAK 339
Query: 216 VEGYTKAHKADDAKRIFRK-MQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEML-EA 273
V+ +A K +A + K M P Y VL++GLC + +A + +M +
Sbjct: 340 VKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQV 399
Query: 274 GHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK----GFAVNEKAVKDFLNKKKPFSP 329
N T+ LV+G C++ EA ++ ++ K G +K + + +
Sbjct: 400 SCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEA 459
Query: 330 SVW 332
+W
Sbjct: 460 VMW 462
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Query: 160 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGL-MREKGTIPEIVIYTAV 215
+ +E+ M+ G P A + LC+ G ++EA+ + M + +P + +Y +
Sbjct: 316 EGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVL 375
Query: 216 VEGYTKAHKADDAKRIFRKMQSN-GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 274
++G K+ +A +KM N +Y LV GLC+ + +A + EML
Sbjct: 376 IKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKS 435
Query: 275 HSPNVTTFVDLVEGFC 290
H P V T+ +++G C
Sbjct: 436 HFPGVETYHMMIKGLC 451
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 13/183 (7%)
Query: 163 EIFKKMKETGLIPNAVAMLDG-------LCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E K++ LI A+ LD L ++G + E ++ MR KG P IY A
Sbjct: 280 ERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAK 339
Query: 216 VEGYTKAHKADDAKRIFRK-MQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEML-EA 273
V+ +A K +A + K M P Y VL++GLC + +A + +M +
Sbjct: 340 VKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQV 399
Query: 274 GHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK----GFAVNEKAVKDFLNKKKPFSP 329
N T+ LV+G C++ EA ++ ++ K G +K + + +
Sbjct: 400 SCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEA 459
Query: 330 SVW 332
+W
Sbjct: 460 VMW 462
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 99/228 (43%), Gaps = 17/228 (7%)
Query: 87 RFDGNRD---EVEKTTMKSDLGFQGRNRPDVANQLGDSFLDKFKLGFDNKAGNSSETNQS 143
RFD + E+E + D G P V+N ++ + + F K G S + +
Sbjct: 221 RFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFF--KMGKKSLVSWN 278
Query: 144 EEATKSSNSNQPAMPEDADEIFKKMKETGLIPNAVAMLDGL--CKD-GLVQEALKLFGLM 200
+ AMP +A E++ +M+ G P+AV++ L C D + K+ G +
Sbjct: 279 ---VMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYI 335
Query: 201 REKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRL 260
K IP +++ A+++ Y K + A+ +F M+S + S+T ++ R
Sbjct: 336 ERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSR----DVVSWTAMISAYGFSGRG 391
Query: 261 QDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQG-IEEAKGAIKTLIE 307
DA ++ ++G P+ FV + C G +EE + K + +
Sbjct: 392 CDAVALFSKLQDSGLVPDSIAFVTTLAA-CSHAGLLEEGRSCFKLMTD 438
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 76/144 (52%), Gaps = 13/144 (9%)
Query: 156 AMPEDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
+P++A ++F +M E ++ + ++ G K+ ++ EA +F LM E+ +V +TA+
Sbjct: 62 GLPKEARQLFDEMSERNVV-SWNGLVSGYIKNRMIVEARNVFELMPERN----VVSWTAM 116
Query: 216 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
V+GY + +A+ +F +M N S+TV+ GL R+ A + +M+
Sbjct: 117 VKGYMQEGMVGEAESLFWRMPER----NEVSWTVMFGGLIDDGRIDKARKL-YDMMPV-- 169
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAK 299
+V +++ G C+E ++EA+
Sbjct: 170 -KDVVASTNMIGGLCREGRVDEAR 192
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 27/146 (18%)
Query: 180 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 239
M+ GLC++G V EA +F MRE+ +V +T ++ GY + ++ D A+++F M
Sbjct: 178 MIGGLCREGRVDEARLIFDEMRERN----VVTWTTMITGYRQNNRVDVARKLFEVMPEK- 232
Query: 240 ISPNAFSYTVLVQGLCKCSRLQDAFEF-----------CVEML----EAGHSPNVTTFVD 284
S+T ++ G R++DA EF C M+ E G D
Sbjct: 233 ---TEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFD 289
Query: 285 LVEGFCKEQGIEEAKGAIKTLIEKGF 310
L+E ++ +G IK KGF
Sbjct: 290 LME----DRDNATWRGMIKAYERKGF 311
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 6/131 (4%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
+++ G GL +EALK+F M GT+P V A++ + A K ++ IF M+S
Sbjct: 402 SIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESK 461
Query: 239 -GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQG-IE 296
++P Y+ V L + ++ A E M P+ T + L+ G CK ++
Sbjct: 462 FCVTPTVEHYSCTVDMLGRAGQVDKAMELIESM---TIKPDATVWGALL-GACKTHSRLD 517
Query: 297 EAKGAIKTLIE 307
A+ A K L E
Sbjct: 518 LAEVAAKKLFE 528
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 78/188 (41%), Gaps = 37/188 (19%)
Query: 158 PEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGT--------- 205
PE A EI ++M+ G+ +A +L L K G ++ A L+ M +KG
Sbjct: 190 PEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNV 249
Query: 206 -------------------------IPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGI 240
P+ + Y ++ Y + D+AK+++ ++ N
Sbjct: 250 RIMSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNC 309
Query: 241 SPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKG 300
+PNA ++ L+ LC + + + + P+ T LV G + + ++AKG
Sbjct: 310 APNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDAKG 369
Query: 301 AIKTLIEK 308
I+T+ +K
Sbjct: 370 LIRTVKKK 377
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 44/170 (25%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
A++D CK G+++ A +F EK ++ ++T+++ G A ++F +MQ
Sbjct: 408 ALIDMYCKCGIIERAFMVFKTATEK----DVALWTSMITGLAFHGNGQQALQLFGRMQEE 463
Query: 239 GISPN---------AFSYTVLV-QGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEG 288
G++PN A S++ LV +GL + ++D F G P + LV+
Sbjct: 464 GVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKF---------GFDPETEHYGSLVDL 514
Query: 289 FCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLNKKKPFSP--SVWEAIF 336
C+ +EEA KD + KK P P S+W +I
Sbjct: 515 LCRAGRVEEA-------------------KDIVQKKMPMRPSQSMWGSIL 545
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEG 218
E A +FK E + +M+ GL G Q+AL+LFG M+E+G P V AV+
Sbjct: 420 ERAFMVFKTATEKD-VALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTA 478
Query: 219 YTKAHKADDAKRIFRKMQSN-GISPNAFSYTVLVQGLCKCSRLQDA 263
+ + ++ +F M+ G P Y LV LC+ R+++A
Sbjct: 479 CSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEA 524
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 95/221 (42%), Gaps = 26/221 (11%)
Query: 84 SRSRFDG--NRDEVEKTTMKSDLGFQGRNRPDVANQLGDSFLDKFKLGFDNKAGNSSETN 141
+R FD R V TTM S G+ DV+ +L D +K + ++ G S +
Sbjct: 311 ARRIFDNLEKRTIVSWTTMIS--GYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAK 368
Query: 142 QSEEATKSSNSNQPAMPEDADEIFKKMKETGLIPNAVAMLDGL--CKD-GLVQEALKLFG 198
+ + DA +F++M+ + P+ + M+ L C G + + +
Sbjct: 369 RGQ---------------DALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHR 413
Query: 199 LMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCS 258
+ + + + T++V+ Y K +A +F +Q+ N+ +YT ++ GL
Sbjct: 414 YIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR----NSLTYTAIIGGLALHG 469
Query: 259 RLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAK 299
A + EM++AG +P+ TF+ L+ C I+ +
Sbjct: 470 DASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGR 510
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 66/135 (48%), Gaps = 5/135 (3%)
Query: 161 ADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
A+++F + KE + M+ G + G+ + A+ LF M+E G P+ + + AV+ +
Sbjct: 575 AEDMFSQTKERNSV-TYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACS 633
Query: 221 KAHKADDAKRIFRKM-QSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNV 279
+ D+ +IF +M + I P++ Y + L + R+ +A+EF + E G N+
Sbjct: 634 YSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEG---NI 690
Query: 280 TTFVDLVEGFCKEQG 294
+ G CK G
Sbjct: 691 AELWGSLLGSCKLHG 705
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Query: 159 EDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEG 218
+ A +F M+ +I + +M+ G K G L+ F M E+G P V Y A++
Sbjct: 526 DTASRVFNFMENRNVI-SWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSA 584
Query: 219 YTKAHKADDAKRIFRKM-QSNGISPNAFSYTVLVQGLCKCSRLQDAFEF 266
+ + R F M + + I P Y +V LC+ L DAFEF
Sbjct: 585 CSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEF 633
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 161 ADEIFKKMKE-TGLIPNAVAMLDGLCKDGLVQEALKLFGLMR-EKGTIPEIVIYTAVVEG 218
A +F M E T + NA ML G K GL +E L+LF LMR EK P+ V AV+ G
Sbjct: 308 ARRLFDNMPERTAISWNA--MLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSG 365
Query: 219 YTKAHKADDAKRIFRKMQSN--GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 270
+ D IF M + G P Y +V L + R+ +AFEF M
Sbjct: 366 CSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRM 419
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 61/112 (54%), Gaps = 6/112 (5%)
Query: 195 KLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGL 254
++ GL +KG E V TA+V+ Y K + D+ +F M + + S+T ++ G
Sbjct: 464 QIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGM----LERDVVSWTGIIVGF 519
Query: 255 CKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGI-EEAKGAIKTL 305
+ R+++AF + +M+ G PN TF+ L+ C+ G+ EEA+ ++T+
Sbjct: 520 GQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSA-CRHSGLLEEARSTLETM 570
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 18/166 (10%)
Query: 163 EIFKKMKETGLIPN--AVAMLDGLCKDGLVQEA-LKLFGLMREKGTIPEIVIYTAVVEGY 219
+++ M+ G PN A + G C E ++ + + G I + +++++ Y
Sbjct: 259 DMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMY 318
Query: 220 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNV 279
K +DA+R+F +MQ N FS+T ++ G K ++A E M E PN
Sbjct: 319 AKCGGINDARRVFDQMQEK----NVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNY 374
Query: 280 TTFVDLVEGFCKEQGIEEAKGAIKTLIEKGFAVNEKAVKDFLNKKK 325
TF+ + C G L++KG+ + E +D+ K K
Sbjct: 375 VTFLGALSA-CSHSG----------LVDKGYEIFESMQRDYSMKPK 409
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 77/153 (50%), Gaps = 10/153 (6%)
Query: 159 EDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEG 218
E A +F+ MK+ ++ +M+ G G V++A ++F + K +IV+Y A+VEG
Sbjct: 192 ESARTVFETMKDENVVC-CTSMISGYMNQGFVEDAEEIFNTTKVK----DIVVYNAMVEG 246
Query: 219 YTKAHKADDAKR---IFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 275
++++ + AKR ++ MQ G PN ++ ++ + + + +++++G
Sbjct: 247 FSRS--GETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGV 304
Query: 276 SPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEK 308
++ L++ + K GI +A+ + EK
Sbjct: 305 YTHIKMGSSLLDMYAKCGGINDARRVFDQMQEK 337
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Query: 160 DADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 219
DA +F +M+E + + +M+DG K+G +EAL+LF M+E P V + +
Sbjct: 326 DARRVFDQMQEKNVF-SWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSAC 384
Query: 220 TKAHKADDAKRIFRKMQSN-GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 272
+ + D IF MQ + + P Y +V + + L AFEF M E
Sbjct: 385 SHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPE 438
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 5/101 (4%)
Query: 161 ADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 220
A +F M++ + +M+ G G + EA LF E+ + ++V++TA++ GY
Sbjct: 201 ARAVFDSMRDKN-VKCWTSMVFGYVSTGRIDEARVLF----ERSPVKDVVLWTAMMNGYV 255
Query: 221 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQ 261
+ ++ D+A +FR MQ+ GI P+ F L+ G + L+
Sbjct: 256 QFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALE 296
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 103/248 (41%), Gaps = 29/248 (11%)
Query: 82 RGSRSRFDG--NRDEVEKTTMKSDLGFQGRNRPDVANQLGDSFLDKFK----------LG 129
R +R FD RD++ TTM S ++ D AN L + +K + +G
Sbjct: 921 REARKVFDEMPERDDIAWTTMVS--AYRRVLDMDSANSLANQMSEKNEATSNCLINGYMG 978
Query: 130 FDNKAGNSSETNQS------EEATKSSNSNQPAMPEDADEIFKKMKETGLIPNAVAM--- 180
N S NQ T +Q +A +F KM E G+IP+ V M
Sbjct: 979 LGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTV 1038
Query: 181 LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGI 240
+ G+++ ++ + G + ++ I +A+V+ Y+K + A +F +
Sbjct: 1039 ISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKK-- 1096
Query: 241 SPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQG-IEEAK 299
N F + +++GL Q+A + +M PN TFV + C G ++E +
Sbjct: 1097 --NLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTA-CTHAGLVDEGR 1153
Query: 300 GAIKTLIE 307
+++I+
Sbjct: 1154 RIYRSMID 1161
>AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5213290-5215296 FORWARD
LENGTH=668
Length = 668
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 10/162 (6%)
Query: 159 EDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 215
E ++E+ K+MK G +P+ + L + G EA + M G + ++
Sbjct: 414 EQSNELLKEMKRGGYVPSGDMQSMIASSLSRKGKKDEADEFVDFMESSGNNLDDKAMASL 473
Query: 216 VEGYTKAHKADDAKRIFRKMQSN-GISPNAFSYTVLVQGLCKCSRLQDAFEFC-VEMLEA 273
VEGY + D+A F KM N G+S +S+ LV C ++++DA++ ++ +
Sbjct: 474 VEGYCDSGNLDEALVCFEKMVGNTGVSYADYSFEKLVLAYCNKNQVRDAYKLLSAQVTKN 533
Query: 274 GHSPNVTTFVDLVEGF-----CKEQGIEEAKGAIKTLIEKGF 310
P +T+ LV ++ G EEA + + + GF
Sbjct: 534 QLKPRHSTYKSLVTNLLTKKIARDGGFEEALSLLPIMKDHGF 575
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 4/120 (3%)
Query: 179 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 238
A++D CK + A +F M++K +V +TA+V GY + +A++A +IF MQ +
Sbjct: 310 ALIDMYCKCKCLHYAKTVFDRMKQK----NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRS 365
Query: 239 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEA 298
GI P+ ++ + S L++ +F + + +G VT LV + K I+++
Sbjct: 366 GIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDS 425