Miyakogusa Predicted Gene

Lj2g3v0343900.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0343900.1 tr|B9IDA9|B9IDA9_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_575848 PE=4
SV=1,69.09,0.00000000000003,CitMHS,Citrate transporter-like domain;
ARSENITE TRANSPORT PROTEIN,NULL; SOLUTE CARRIER FAMILY 13
ME,CUFF.34502.1
         (490 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G02260.1 | Symbols:  | Divalent ion symporter | chr1:440757-4...   622   e-178

>AT1G02260.1 | Symbols:  | Divalent ion symporter |
           chr1:440757-442459 REVERSE LENGTH=502
          Length = 502

 Score =  622 bits (1603), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 321/495 (64%), Positives = 378/495 (76%), Gaps = 47/495 (9%)

Query: 1   MALAPIPKVILGSTAFAIFWVLAVFPAVPFLPIGRTAGSLLGAMLMVIFRVLTPDQAYAA 60
           MA+AP+ K++LGS AFAIFW+LAVFP+VPFLPIGRTAGSL GAMLMVIF+V+TP+QAYAA
Sbjct: 1   MAMAPVIKLVLGSVAFAIFWILAVFPSVPFLPIGRTAGSLFGAMLMVIFQVITPEQAYAA 60

Query: 61  IDLPILGLLFGTMVVSIYLERADMFKYLGKLLSWKSQGAKDLLCRICLISAVSSALFTND 120
           IDLPILGLLFGTMVVSIYLERADMFKYLG LLSWKS+G KDLLCR+CL+SAVSSALFTND
Sbjct: 61  IDLPILGLLFGTMVVSIYLERADMFKYLGTLLSWKSRGPKDLLCRVCLVSAVSSALFTND 120

Query: 121 TSCVVLTEFILKIARQHNLPPHPFLLALASSANIGSSATPIGNPQNLVIAVQSKISFGKF 180
           TSCVVLTEF+LKIARQ NLPPHPFLLALA+SANIGSSATPIGNPQNLVIAVQSKI F +F
Sbjct: 121 TSCVVLTEFVLKIARQKNLPPHPFLLALATSANIGSSATPIGNPQNLVIAVQSKIPFWEF 180

Query: 181 LTGILPAMLVGVVVNALILIAMYWRILSIHKDVEDPV----AEVEATEEVNSHQFSPATM 236
           L G+ PAM+VG+ VNA++L+ MYWR+LS HK+ E+ V    +EV A E+V SH+FSPAT 
Sbjct: 181 LLGVFPAMIVGITVNAMLLLGMYWRLLSDHKEDEEEVQNADSEVVAQEDVQSHRFSPATF 240

Query: 237 SHVTSSNSQELNGYLETSSLQNSPLVHNLRNRS-TPTDNEIHKVLGGTLDSTRNSNASME 295
           S V+S +S       ET           LRNR+ +  ++E+            NSNAS E
Sbjct: 241 SPVSSEDSNLRMDAAET-----------LRNRAGSAGESELISC---------NSNASRE 280

Query: 296 GTNDVPSQIKEETNPSKTVAEVDNPTEHVMHSSEGKGNIDVMWKDILWKSCVYMITLGML 355
             ND  SQ +             N T ++  +          W+ +LWKS VY ITLGML
Sbjct: 281 QHNDAESQGE------------SNNTNNMFQTKR--------WRRVLWKSSVYFITLGML 320

Query: 356 IAMLLGLNMSWSAITAALALVVLDFKDARPCLEKVSYSLLIFFCGMFITVEGFNKTGIPS 415
           I++L+GLNMSW+AITAALALVVLDFKDARP LEKVSYSLLIFFCGMFITV+GFNKTGIP+
Sbjct: 321 ISLLMGLNMSWTAITAALALVVLDFKDARPSLEKVSYSLLIFFCGMFITVDGFNKTGIPT 380

Query: 416 SLWDLMEPYSEVDRASGXXXXXXXXXXXXXXXXXXPTVLLLGARVAASAATISKEDEKKA 475
           +LWDLMEPY+++D+A G                  PTVLLLGARVAASA  + +E+EKKA
Sbjct: 381 ALWDLMEPYAKIDQAKGIAVLAVVILVLSNVASNVPTVLLLGARVAASA--MGREEEKKA 438

Query: 476 WLILAWVSTIAGNLS 490
           WL+LAWVST+AGNL+
Sbjct: 439 WLLLAWVSTVAGNLT 453