Miyakogusa Predicted Gene

Lj2g3v0319380.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0319380.1 Non Chatacterized Hit- tr|J3L5X9|J3L5X9_ORYBR
Uncharacterized protein OS=Oryza brachyantha GN=OB01G4,38.13,1e-18,no
description,NULL; Protein kinase C conserved region,C2
calcium-dependent membrane targeting; C2 d,CUFF.34596.1
         (304 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G23950.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB ...   151   5e-37
AT1G07310.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB ...    88   7e-18
AT4G01200.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB ...    48   7e-06

>AT5G23950.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB
           domain) family protein | chr5:8082789-8083448 FORWARD
           LENGTH=219
          Length = 219

 Score =  151 bits (382), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 69/131 (52%), Positives = 92/131 (70%)

Query: 6   ELETKLSSARGLKNVNWRHGPNKPYAVVWVDPKNKFSTRADENGDTEANWDQXXXXXXXX 65
           E+E  +SSA+ +KNVNWR+GPNKPYAVVW+DPK K STR DE+G+T   W++        
Sbjct: 7   EVEVTISSAKDIKNVNWRNGPNKPYAVVWIDPKFKSSTRVDEDGNTCTTWNETFVIALPP 66

Query: 66  XXXXXXXXFIDVVHFGSEEDTKPLIGSAKLKLREILDEAGIGDRASRALTLKRPSGRPQG 125
                   +I++VH G EE+TKPLIGSA L LR+++D+ G G    + L LKRPSGRPQG
Sbjct: 67  ANDDDDKVYINIVHAGREENTKPLIGSAHLSLRDVIDDVGFGVPFMKTLKLKRPSGRPQG 126

Query: 126 KVDVKVAIKES 136
           K+DV V ++E+
Sbjct: 127 KLDVTVTVRET 137


>AT1G07310.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB
           domain) family protein | chr1:2247775-2248833 REVERSE
           LENGTH=352
          Length = 352

 Score = 88.2 bits (217), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 73/131 (55%), Gaps = 2/131 (1%)

Query: 6   ELETKLSSARGLKNVNWRHGPNKPYAVVWVDPKNKFSTRADENGDTEANWDQXXXXXXXX 65
           +L   + SA+ LKNVNWR+G  KPY V+++D  +  STR+D++   +  W++        
Sbjct: 8   DLVVTVVSAKHLKNVNWRNGDLKPYVVLYLDQDHPLSTRSDDSSSIKPVWNERITLPLTR 67

Query: 66  XXXXXXXXFIDVVHFGSEEDTKPLIGSAKLKLREILDEAG-IGDRASRALTLKRPSGRPQ 124
                    I+V H  S +  K L+GS +  L  ++D  G +      +L L RPSGRPQ
Sbjct: 68  SVHESVLN-IEVFHSNSSDLAKTLVGSVRFPLARLIDSDGSMIPELINSLELVRPSGRPQ 126

Query: 125 GKVDVKVAIKE 135
           GK+ +K+AIK+
Sbjct: 127 GKIRLKLAIKD 137


>AT4G01200.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB
           domain) family protein | chr4:506783-507535 REVERSE
           LENGTH=250
          Length = 250

 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 54/130 (41%)

Query: 7   LETKLSSARGLKNVNWRHGPNKPYAVVWVDPKNKFSTRADENGDTEANWDQXXXXXXXXX 66
           LE  L SA+GLK    +    + YA VWVD  +K  TR D  G     W+          
Sbjct: 7   LEINLISAQGLKEPTGKLRRLQTYASVWVDSSSKLRTRIDRIGSENPIWNDKFVFQVSPE 66

Query: 67  XXXXXXXFIDVVHFGSEEDTKPLIGSAKLKLREILDEAGIGDRASRALTLKRPSGRPQGK 126
                   + +  +        LIG+ +  +   L  A +   +  AL ++RPSG+  G 
Sbjct: 67  FLSSETSGVSIEIYAVGYLRDHLIGTVRFLVSNFLPTAAVKVPSLVALQIRRPSGKFHGV 126

Query: 127 VDVKVAIKES 136
           +++   + ++
Sbjct: 127 LNIAAMVMDA 136