Miyakogusa Predicted Gene

Lj2g3v0216900.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0216900.1 Non Chatacterized Hit- tr|A5BSF4|A5BSF4_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,40,0.00000000000001,GB DEF: HYPOTHETICAL PROTEIN F7P12.4,NULL;
FAMILY NOT NAMED,Transmembrane protein 18; FHA_DOMAIN,For,CUFF.34375.1
         (1346 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G34355.1 | Symbols: ATPS1, PS1 | forkhead-associated (FHA) do...   310   7e-84

>AT1G34355.1 | Symbols: ATPS1, PS1 | forkhead-associated (FHA)
            domain-containing protein  | chr1:12536497-12541730
            FORWARD LENGTH=1477
          Length = 1477

 Score =  310 bits (793), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 211/537 (39%), Positives = 301/537 (56%), Gaps = 64/537 (11%)

Query: 839  AISKDLLSVLDTEEEIFTPDKENFRPNMLQLRFLKKSGKLEET------KHSKSQSSKDK 892
            A+  D+L  +D+        +     ++L++R  K  GK ++T      K  + Q+  DK
Sbjct: 974  AVRDDVLCDMDSSSTCNIWSRRGKAASVLKIRTNKSQGKQKQTGRQPKDKLHRKQALSDK 1033

Query: 893  TISKDLFSVLDGEKEEEEIYTPDKENFSPNTLHLRRMKRFGKLEETKHSK--SQRSCSSK 950
            +IS  +      E  E EI+TPDKEN +P++  L+R++  G ++++K S   S +SCSS 
Sbjct: 1034 SISLTIHH--GAEILEPEIFTPDKENLTPSSHMLKRLQDIGDVKDSKSSLKLSGKSCSS- 1090

Query: 951  DRTISKDLFSVLDGE--NEEEVYTPDKENFSPNTLHLRRMKKKGKLEEIKHSKFRWSPNP 1008
               +     +VL  E   E E++TPDKEN +P++  L+R+++ G +++ K S        
Sbjct: 1091 ---LVHSSIAVLASEAFTEPEIFTPDKENLTPSSHMLKRLREFGDIKDTKGSS------- 1140

Query: 1009 KGKFGPNIYSDESRSPTSNKENQTPKRVQDQKLQKKPFGTHIKLTQEHDVNALKNRVERV 1068
                     S  +R P  +   +    V+ +       G+  KL  +H+  A K + ER 
Sbjct: 1141 ---------SKATRKPFFDIRMEENVMVEQEPEDLHSLGSKSKL--KHEPLAPKKKAERA 1189

Query: 1069 PFQSL---------KISGTSSPVSAEKSID--VRDCEEISDKHNNPSDTSLVQKRSWDMI 1117
            PFQ L           +  SS  SA  +I   +R    +SD  +         K  W ++
Sbjct: 1190 PFQPLLEKSSFQSQSYTEASSTASARNNISRGIRSSSNLSDAKS---------KMKWTIV 1240

Query: 1118 VDTTTLMNKESRKALQLLQGLKGTRLIVPRLVIRELQSMKQQNSFFRRFRRISEASLALE 1177
            +DT++L++KESRK LQLLQGLKGT L+VPR V+REL  +K+  SF  R RR   AS AL+
Sbjct: 1241 LDTSSLLDKESRKPLQLLQGLKGTHLVVPRTVLRELNEVKRSRSFLFR-RRTEIASSALD 1299

Query: 1178 WVEECMVNTNWWIHIQSSVDEGRRIAPTPPASPQTQICEESWSFHGGIGSFM-EIPSPTI 1236
            W+EEC VN+ WWI +QS  +E + IAPTPP +PQ+     ++ F     ++  EI SPT 
Sbjct: 1300 WIEECKVNSKWWIQVQSPTEETKAIAPTPPVTPQSN-GSSAFPFSLHWNNYAPEIDSPTS 1358

Query: 1237 EDHILDFTLLHKRKQIDGQLVLLSEDVTLKINCMAEGLLCEPVQEFRESLVNPFSERFLW 1296
            ED +L+  LL++ +  D +LVLLS DVTLKI  MAEG++CE   EF ESLVNPFSERF+W
Sbjct: 1359 EDQVLECALLYRNRNRDEKLVLLSNDVTLKIKAMAEGVICETPHEFYESLVNPFSERFMW 1418

Query: 1297 KNSSARGQTWCCEDDVVLRERY----CRLPL---RKSSKGAASGLKLILLHNSQYGH 1346
              S+ARG+TW   D+ VLRERY    CR      R  S  AA GLKLILLHNS YGH
Sbjct: 1419 TESTARGRTWSHLDNDVLRERYNDRACRRKSTYNRGESGAAAKGLKLILLHNSHYGH 1475



 Score =  164 bits (414), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 80/145 (55%), Positives = 98/145 (67%), Gaps = 6/145 (4%)

Query: 11  EGKIPVLTVLKNESILKNIFIVNK----PPEDHSPRRRHRDHE--DILLVGRHPDCDLML 64
           E  IPV TVLKN +ILKNIF+VN      PE +       D E  +IL+VGRHPDCD++L
Sbjct: 17  EKTIPVFTVLKNGAILKNIFVVNSRDFSSPERNGSTVSDDDGEVEEILVVGRHPDCDILL 76

Query: 65  THPSISRYHLHIRSVPXXXXXXXXXXXXXHGTWVSGRKIEAGVRVEMKEGDTLRIGVSSR 124
           THPSISR+HL IRS+              HGTWV   +IE    VE++EGDT+RIG S+R
Sbjct: 77  THPSISRFHLEIRSISSRQKLFVTDLSSVHGTWVRDLRIEPHGCVEVEEGDTIRIGGSTR 136

Query: 125 VYRLHWIPISRAYDLENPFVPEMHA 149
           +YRLHWIP+SRAYDL+NPFV  + A
Sbjct: 137 IYRLHWIPLSRAYDLDNPFVSPLDA 161