Miyakogusa Predicted Gene

Lj2g3v0205750.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0205750.1 tr|A9SFF8|A9SFF8_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_211738,31.79,4e-16,LIPID-BINDING SERUM GLYCOPROTEIN
FAMILY PROTEIN,NULL; BACTERICIDAL PERMEABILITY-INCREASING (BPI)
PRO,CUFF.34363.1
         (200 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G04970.1 | Symbols:  | lipid-binding serum glycoprotein famil...   144   4e-35
AT1G04970.2 | Symbols:  | lipid-binding serum glycoprotein famil...   144   5e-35
AT3G20270.2 | Symbols:  | lipid-binding serum glycoprotein famil...   136   1e-32
AT3G20270.3 | Symbols:  | lipid-binding serum glycoprotein famil...   135   1e-32
AT3G20270.1 | Symbols:  | lipid-binding serum glycoprotein famil...   135   1e-32

>AT1G04970.1 | Symbols:  | lipid-binding serum glycoprotein family
           protein | chr1:1411216-1413431 FORWARD LENGTH=488
          Length = 488

 Score =  144 bits (363), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 72/153 (47%), Positives = 108/153 (70%), Gaps = 4/153 (2%)

Query: 35  LVDAFGGNIASSVEEAVSEKINEGIAKLDKFLQSLPKQIPLDKTSALNVSFVGNPVLSNS 94
           +V+AF   I SSVE  +++K+ EG++ LD FLQSLPK+IP+D  + LNV+F  +P+L NS
Sbjct: 184 MVNAFKDQIGSSVESTIAKKLTEGVSDLDSFLQSLPKEIPVDDNADLNVTFTSDPILRNS 243

Query: 95  SIAIAINGLFT--ERSEVVESEGYKKGFKISSACGGLPNMIKVSLHEYVIQSASLVYFNA 152
           SI   I+GLFT  E ++V++S  +KK   +   C G   M+ +S+ E V  SA+ +Y+NA
Sbjct: 244 SITFEIDGLFTKGETNQVLKSF-FKKSVSL-VICPGNSKMLGISVDEAVFNSAAALYYNA 301

Query: 153 GKMQLIIDELPDQVILNTAECRFIVPQLYKQYP 185
             +Q ++D++P+Q +LNTA  RFI+PQLYK+YP
Sbjct: 302 DFVQWVVDKIPEQSLLNTARWRFIIPQLYKKYP 334


>AT1G04970.2 | Symbols:  | lipid-binding serum glycoprotein family
           protein | chr1:1411924-1413431 FORWARD LENGTH=349
          Length = 349

 Score =  144 bits (362), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 72/153 (47%), Positives = 108/153 (70%), Gaps = 4/153 (2%)

Query: 35  LVDAFGGNIASSVEEAVSEKINEGIAKLDKFLQSLPKQIPLDKTSALNVSFVGNPVLSNS 94
           +V+AF   I SSVE  +++K+ EG++ LD FLQSLPK+IP+D  + LNV+F  +P+L NS
Sbjct: 45  MVNAFKDQIGSSVESTIAKKLTEGVSDLDSFLQSLPKEIPVDDNADLNVTFTSDPILRNS 104

Query: 95  SIAIAINGLFT--ERSEVVESEGYKKGFKISSACGGLPNMIKVSLHEYVIQSASLVYFNA 152
           SI   I+GLFT  E ++V++S  +KK   +   C G   M+ +S+ E V  SA+ +Y+NA
Sbjct: 105 SITFEIDGLFTKGETNQVLKSF-FKKSVSL-VICPGNSKMLGISVDEAVFNSAAALYYNA 162

Query: 153 GKMQLIIDELPDQVILNTAECRFIVPQLYKQYP 185
             +Q ++D++P+Q +LNTA  RFI+PQLYK+YP
Sbjct: 163 DFVQWVVDKIPEQSLLNTARWRFIIPQLYKKYP 195


>AT3G20270.2 | Symbols:  | lipid-binding serum glycoprotein family
           protein | chr3:7068879-7070866 FORWARD LENGTH=515
          Length = 515

 Score =  136 bits (342), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 72/157 (45%), Positives = 104/157 (66%), Gaps = 5/157 (3%)

Query: 30  LLRSRLVDAFGGNIASSVEEAVSEKINEGIAKLDKFLQSLPKQIPLDKTSALNVSFVGNP 89
            L   +VDAF   I S+VE+ VS KI E + KLD FLQSLPKQ  +D ++A+N++F GNP
Sbjct: 215 WLYQGVVDAFQKMIISTVEKTVSTKIVEKMKKLDSFLQSLPKQRKIDDSAAVNLTFTGNP 274

Query: 90  VLSNSSIAIAINGLFTERSEVVESEGYKKGFKISSACGGL-PNMIKVSLHEYVIQSASLV 148
           VL NSS+ + INGLF  + + ++  G +     SS  GG+   M+ +S+ E V  SA+LV
Sbjct: 275 VLGNSSVEVDINGLFMPKGDDIKVAGSRS----SSFFGGVNKRMVTISVEEGVFNSATLV 330

Query: 149 YFNAGKMQLIIDELPDQVILNTAECRFIVPQLYKQYP 185
           YFNA  M L+++E  +  IL+T++ + I+P+LYK YP
Sbjct: 331 YFNAKVMHLVMEETKNGSILSTSDWKLILPELYKHYP 367


>AT3G20270.3 | Symbols:  | lipid-binding serum glycoprotein family
           protein | chr3:7067779-7070866 FORWARD LENGTH=722
          Length = 722

 Score =  135 bits (341), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 72/157 (45%), Positives = 104/157 (66%), Gaps = 5/157 (3%)

Query: 30  LLRSRLVDAFGGNIASSVEEAVSEKINEGIAKLDKFLQSLPKQIPLDKTSALNVSFVGNP 89
            L   +VDAF   I S+VE+ VS KI E + KLD FLQSLPKQ  +D ++A+N++F GNP
Sbjct: 422 WLYQGVVDAFQKMIISTVEKTVSTKIVEKMKKLDSFLQSLPKQRKIDDSAAVNLTFTGNP 481

Query: 90  VLSNSSIAIAINGLFTERSEVVESEGYKKGFKISSACGGL-PNMIKVSLHEYVIQSASLV 148
           VL NSS+ + INGLF  + + ++  G +     SS  GG+   M+ +S+ E V  SA+LV
Sbjct: 482 VLGNSSVEVDINGLFMPKGDDIKVAGSRS----SSFFGGVNKRMVTISVEEGVFNSATLV 537

Query: 149 YFNAGKMQLIIDELPDQVILNTAECRFIVPQLYKQYP 185
           YFNA  M L+++E  +  IL+T++ + I+P+LYK YP
Sbjct: 538 YFNAKVMHLVMEETKNGSILSTSDWKLILPELYKHYP 574


>AT3G20270.1 | Symbols:  | lipid-binding serum glycoprotein family
           protein | chr3:7067779-7070866 FORWARD LENGTH=722
          Length = 722

 Score =  135 bits (341), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 72/157 (45%), Positives = 104/157 (66%), Gaps = 5/157 (3%)

Query: 30  LLRSRLVDAFGGNIASSVEEAVSEKINEGIAKLDKFLQSLPKQIPLDKTSALNVSFVGNP 89
            L   +VDAF   I S+VE+ VS KI E + KLD FLQSLPKQ  +D ++A+N++F GNP
Sbjct: 422 WLYQGVVDAFQKMIISTVEKTVSTKIVEKMKKLDSFLQSLPKQRKIDDSAAVNLTFTGNP 481

Query: 90  VLSNSSIAIAINGLFTERSEVVESEGYKKGFKISSACGGL-PNMIKVSLHEYVIQSASLV 148
           VL NSS+ + INGLF  + + ++  G +     SS  GG+   M+ +S+ E V  SA+LV
Sbjct: 482 VLGNSSVEVDINGLFMPKGDDIKVAGSRS----SSFFGGVNKRMVTISVEEGVFNSATLV 537

Query: 149 YFNAGKMQLIIDELPDQVILNTAECRFIVPQLYKQYP 185
           YFNA  M L+++E  +  IL+T++ + I+P+LYK YP
Sbjct: 538 YFNAKVMHLVMEETKNGSILSTSDWKLILPELYKHYP 574