Miyakogusa Predicted Gene

Lj2g3v0189310.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0189310.1 Non Chatacterized Hit- tr|I1KAT4|I1KAT4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.31790
PE,80.95,0.00000000005,seg,NULL,CUFF.34334.1
         (58 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G53000.1 | Symbols: TAP46 | 2A phosphatase associated protein...    49   8e-07

>AT5G53000.1 | Symbols: TAP46 | 2A phosphatase associated protein of
           46 kD | chr5:21485654-21487869 REVERSE LENGTH=405
          Length = 405

 Score = 48.9 bits (115), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 1   MSIEEAGLREMEIMNKWQEQHNRLMEEANSAWYKER 36
           M IE+AGL EM IMN WQEQ  + +EEA ++WY ++
Sbjct: 325 MCIEDAGLTEMNIMNDWQEQTKKAIEEATTSWYNDK 360