Miyakogusa Predicted Gene
- Lj2g3v0177210.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0177210.1 Non Chatacterized Hit- tr|F6T4B7|F6T4B7_MONDO
Uncharacterized protein OS=Monodelphis domestica
GN=HE,30.08,1e-18,RCC1,Regulator of chromosome condensation, RCC1;
RCC1/BLIP-II,Regulator of chromosome condensation/b,CUFF.34314.1
(396 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G16040.1 | Symbols: | Regulator of chromosome condensation (... 640 0.0
AT3G02510.1 | Symbols: | Regulator of chromosome condensation (... 638 0.0
AT3G02510.2 | Symbols: | Regulator of chromosome condensation (... 508 e-144
AT5G63860.1 | Symbols: UVR8 | Regulator of chromosome condensati... 167 1e-41
AT5G60870.1 | Symbols: | Regulator of chromosome condensation (... 138 6e-33
AT5G60870.2 | Symbols: | Regulator of chromosome condensation (... 133 3e-31
AT3G02300.1 | Symbols: | Regulator of chromosome condensation (... 124 1e-28
AT3G26100.2 | Symbols: | Regulator of chromosome condensation (... 122 3e-28
AT3G26100.1 | Symbols: | Regulator of chromosome condensation (... 122 3e-28
AT5G19420.2 | Symbols: | Regulator of chromosome condensation (... 117 1e-26
AT5G19420.1 | Symbols: | Regulator of chromosome condensation (... 117 1e-26
AT5G12350.1 | Symbols: | Regulator of chromosome condensation (... 117 1e-26
AT5G60870.3 | Symbols: | Regulator of chromosome condensation (... 117 2e-26
AT3G55580.1 | Symbols: | Regulator of chromosome condensation (... 114 1e-25
AT5G11580.1 | Symbols: | Regulator of chromosome condensation (... 113 2e-25
AT1G65920.1 | Symbols: | Regulator of chromosome condensation (... 111 8e-25
AT4G14368.1 | Symbols: | Regulator of chromosome condensation (... 110 1e-24
AT1G27060.1 | Symbols: | Regulator of chromosome condensation (... 110 2e-24
AT1G69710.1 | Symbols: | Regulator of chromosome condensation (... 109 3e-24
AT3G15430.2 | Symbols: | Regulator of chromosome condensation (... 109 4e-24
AT3G15430.1 | Symbols: | Regulator of chromosome condensation (... 109 4e-24
AT3G53830.1 | Symbols: | Regulator of chromosome condensation (... 109 4e-24
AT1G76950.1 | Symbols: PRAF1 | Regulator of chromosome condensat... 108 6e-24
AT5G42140.1 | Symbols: | Regulator of chromosome condensation (... 107 2e-23
AT3G23270.1 | Symbols: | Regulator of chromosome condensation (... 102 4e-22
AT5G08710.1 | Symbols: | Regulator of chromosome condensation (... 102 5e-22
AT5G48330.2 | Symbols: | Regulator of chromosome condensation (... 102 5e-22
AT5G48330.1 | Symbols: | Regulator of chromosome condensation (... 102 6e-22
AT3G03790.3 | Symbols: | ankyrin repeat family protein / regula... 95 8e-20
AT3G03790.1 | Symbols: | ankyrin repeat family protein / regula... 95 8e-20
AT3G03790.2 | Symbols: | ankyrin repeat family protein / regula... 95 8e-20
AT3G47660.1 | Symbols: | Regulator of chromosome condensation (... 92 5e-19
AT1G19880.1 | Symbols: | Regulator of chromosome condensation (... 90 2e-18
>AT5G16040.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:5240860-5243308 REVERSE
LENGTH=396
Length = 396
Score = 640 bits (1652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/397 (79%), Positives = 348/397 (87%), Gaps = 3/397 (0%)
Query: 1 MDSNSPIIAWGSGEDGQLGIGNNEDKEWVCXXXXXXXXXXXXXXXXXXXXLAICDDGKLF 60
M S + +IAWGSGEDGQLG+G +E+KE LAICDDGKLF
Sbjct: 1 MASATSVIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLF 60
Query: 61 TWGWNQRGTLGHPPETKTENIPSQVKALSHVKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 120
TWGWNQRGTLGHPPETKTE+ PS VK+L++VKIVQAAIGGWHCLAVDDQGRAYAWGGNEY
Sbjct: 61 TWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 120
Query: 121 GQCGEEPERKDDTGRPLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTREGHVWTWGQPWP 180
GQCGEEP KD+TGRP+RRDIVIP+RCA +L VRQVAAGGTHSVVLTREG+VWTWGQPWP
Sbjct: 121 GQCGEEPS-KDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQPWP 179
Query: 181 PGDIKQISVPVRVQGLENVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQP 240
PGDIKQISVPVRVQGLENVRLIAVGAFHNLAL+EDGTLWAWGNNEYGQLGTGDTQPRS P
Sbjct: 180 PGDIKQISVPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYP 239
Query: 241 IPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDSDKSSKMVPQRVQLL 300
IPVQGL LTLVDIAAGGWHSTALT++GEVYGWGRGEHGRLGFGD+DKSSKM+PQ+V LL
Sbjct: 240 IPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLL 299
Query: 301 AGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKVTTGQPIEVPINIPPPQNLS 360
AGEDI+QVSCGGTHSVALTRDGR+FSFGRGDHGRLGYGRKVTTGQP+E+PI+IPPP+
Sbjct: 300 AGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIHIPPPEGRF 359
Query: 361 G--NEADEGHWISKLVACGGRHTLAIVEWKVDEPQVD 395
+E D+G WI+K VACGGRHTLAIVEWK D+ + +
Sbjct: 360 NHTDEEDDGKWIAKHVACGGRHTLAIVEWKYDQEETE 396
>AT3G02510.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:522086-524536 REVERSE
LENGTH=393
Length = 393
Score = 638 bits (1646), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/393 (80%), Positives = 339/393 (86%), Gaps = 3/393 (0%)
Query: 1 MDSNSPIIAWGSGEDGQLGIGNNEDKEWVCXXXXXXXXXXXXXXXXXXXXLAICDDGKLF 60
M + + IIAWGSGEDGQLGIG NE+KEW C LAICDDG +F
Sbjct: 1 MVTATSIIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMF 60
Query: 61 TWGWNQRGTLGHPPETKTENIPSQVKALSHVKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 120
TWGWNQRGTLGH PETKTENIPS+VKAL++VKI QAAIGGWHCLAVDDQGRAYAWGGNEY
Sbjct: 61 TWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEY 120
Query: 121 GQCGEEPERKDDTGRPLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTREGHVWTWGQPWP 180
GQCGEEP KD+ GRP+RRDIVIP+RCAPKL VRQVAAGGTHSVVLTREGHVWTWGQPWP
Sbjct: 121 GQCGEEP-LKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQPWP 179
Query: 181 PGDIKQISVPVRVQGLENVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQP 240
PGDIKQISVPVRVQGLENVRLIAVGAFHNLAL+EDG L AWGNNEYGQLGTGDTQP S P
Sbjct: 180 PGDIKQISVPVRVQGLENVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHP 239
Query: 241 IPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDSDKSSKMVPQRVQLL 300
+PVQGL LTLVDIAAGGWHSTALTD GEVYGWGRGEHGRLG GD+DKSSKMVPQ+V LL
Sbjct: 240 VPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLL 299
Query: 301 AGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKVTTGQPIEVPINIPPPQNLS 360
A EDI+QVSCGGTHSVALTRDGR+FSFGRGDHGRLGYGRKVTTGQP+E+PI IPPP+
Sbjct: 300 AEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIKIPPPEGSF 359
Query: 361 G--NEADEGHWISKLVACGGRHTLAIVEWKVDE 391
+E +EG W +K +ACGGRHTLAIVEWK D+
Sbjct: 360 NHTDEEEEGKWSAKSIACGGRHTLAIVEWKSDD 392
>AT3G02510.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:522524-524536 REVERSE
LENGTH=310
Length = 310
Score = 508 bits (1308), Expect = e-144, Method: Compositional matrix adjust.
Identities = 251/308 (81%), Positives = 266/308 (86%), Gaps = 1/308 (0%)
Query: 1 MDSNSPIIAWGSGEDGQLGIGNNEDKEWVCXXXXXXXXXXXXXXXXXXXXLAICDDGKLF 60
M + + IIAWGSGEDGQLGIG NE+KEW C LAICDDG +F
Sbjct: 1 MVTATSIIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMF 60
Query: 61 TWGWNQRGTLGHPPETKTENIPSQVKALSHVKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 120
TWGWNQRGTLGH PETKTENIPS+VKAL++VKI QAAIGGWHCLAVDDQGRAYAWGGNEY
Sbjct: 61 TWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEY 120
Query: 121 GQCGEEPERKDDTGRPLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTREGHVWTWGQPWP 180
GQCGEEP KD+ GRP+RRDIVIP+RCAPKL VRQVAAGGTHSVVLTREGHVWTWGQPWP
Sbjct: 121 GQCGEEP-LKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQPWP 179
Query: 181 PGDIKQISVPVRVQGLENVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQP 240
PGDIKQISVPVRVQGLENVRLIAVGAFHNLAL+EDG L AWGNNEYGQLGTGDTQP S P
Sbjct: 180 PGDIKQISVPVRVQGLENVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHP 239
Query: 241 IPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDSDKSSKMVPQRVQLL 300
+PVQGL LTLVDIAAGGWHSTALTD GEVYGWGRGEHGRLG GD+DKSSKMVPQ+V LL
Sbjct: 240 VPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLL 299
Query: 301 AGEDIVQV 308
A EDI+QV
Sbjct: 300 AEEDIIQV 307
>AT5G63860.1 | Symbols: UVR8 | Regulator of chromosome condensation
(RCC1) family protein | chr5:25554821-25558587 REVERSE
LENGTH=440
Length = 440
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 118/354 (33%), Positives = 181/354 (51%), Gaps = 24/354 (6%)
Query: 3 SNSPIIAWGSGEDGQLGIGNNEDKEWVCXXXXXXXXXXXXXXXXXXXXLAICDDG-KLFT 61
S + +WG GEDGQLG G+ ED+ +A G ++++
Sbjct: 32 SGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYS 91
Query: 62 WGWNQRGTLGHPPETKTENIPSQVKALSHVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYG 121
WGW G LGH + P +KAL ++I Q A G HCLAV +G +WG N+ G
Sbjct: 92 WGWGDFGRLGHGNSSDLFT-PLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNG 150
Query: 122 QCGEEPERKDDTGRPLRRDIVIPQRCAP--KLVVRQVAAGGTHSVVLTREGHVWTWG--- 176
Q G DT D ++PQ+ + ++ VAAG H+ +T +G ++ WG
Sbjct: 151 QLG-----LGDT-----EDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGR 200
Query: 177 -QPWPPGDIKQISVPVRVQ--GLENVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGD 233
GD VP RV G E + ++A G H +++ G L+ +G ++YGQLG GD
Sbjct: 201 YGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGD 260
Query: 234 TQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDS-DKSSKM 292
+ P ++ LS + I+ G H+ ALT DG++YGWG + G++G G++ D+ S
Sbjct: 261 LEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCS-- 318
Query: 293 VPQRVQLLAGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKVTTGQP 346
P +V+ + +VQVSCG H++A+T +F++GRG +G+LG G V P
Sbjct: 319 -PVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFP 371
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 104/343 (30%), Positives = 170/343 (49%), Gaps = 32/343 (9%)
Query: 51 LAICDDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALSHVKIVQAAIGGWHCLAVDDQG 110
+A+ + +WG + G LGH + + P+Q+ AL +IV G H +A G
Sbjct: 28 VALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSG 86
Query: 111 -RAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTRE 169
Y+WG ++G+ G D PL P + + ++Q+A G +H + +T E
Sbjct: 87 MEVYSWGWGDFGRLGHG--NSSDLFTPL------PIKALHGIRIKQIACGDSHCLAVTME 138
Query: 170 GHVWTWGQ----PWPPGDIKQISVPVRVQGLENVR--LIAVGAFHNLALQEDGTLWAWGN 223
G V +WG+ GD + VP ++Q E +R ++A GA H A+ EDG L+ WG
Sbjct: 139 GEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGW 198
Query: 224 NEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGF 283
YG LG GD R P V G + +A G H+ +++ G +Y +G ++G+LG
Sbjct: 199 GRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGH 258
Query: 284 GDSDKSSKMVPQRVQLLAGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKVTT 343
GD + ++P +++ L+ I Q+S G H++ALT DG+++ +G G++G G +
Sbjct: 259 GDLED--HLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQ 316
Query: 344 GQPIEVPINIPPPQNLSGNEADEGHWISKLVACGGRHTLAIVE 386
P++V P Q + V+CG RHTLA+ E
Sbjct: 317 CSPVQV--RFPDDQKVV------------QVSCGWRHTLAVTE 345
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 156/302 (51%), Gaps = 31/302 (10%)
Query: 92 KIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCAPKL 151
K++ + G H +A+ +WG E GQ G +D P + + +
Sbjct: 16 KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGD--AEDRPSPTQLSALDGHQ----- 68
Query: 152 VVRQVAAGGTHSVVLTREG---HVWTWGQ--PWPPGDIKQISVPVRVQGLENVRL--IAV 204
+ V G H+V ++ G + W WG G+ + P+ ++ L +R+ IA
Sbjct: 69 -IVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIAC 127
Query: 205 GAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTAL 264
G H LA+ +G + +WG N+ GQLG GDT+ P +Q G+ + +AAG H+ A+
Sbjct: 128 GDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAV 187
Query: 265 TDDGEVYGWGRGEHGRLGFGDSDKSSKMVPQRVQLLAGEDIVQVSCGGTHSVALTRDGRM 324
T+DG++YGWG G +G LG G D++ ++VP+RV GE + V+CG H+++++ G +
Sbjct: 188 TEDGDLYGWGWGRYGNLGLG--DRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGAL 245
Query: 325 FSFGRGDHGRLGYGRKVTTGQPIEVPINIPPPQNLSGNEADEGHWISKLVACGGRHTLAI 384
+++G +G+LG+G ++ ++ P + EA +IS+ ++ G RHT+A+
Sbjct: 246 YTYGWSKYGQLGHG---------DLEDHLIPHK----LEALSNSFISQ-ISGGWRHTMAL 291
Query: 385 VE 386
Sbjct: 292 TS 293
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 135/255 (52%), Gaps = 23/255 (9%)
Query: 137 LRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPVR 192
+ D+ + AP V ++AG +HSV L V +WG+ GD + P +
Sbjct: 1 MAEDMAADEVTAPPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQ 60
Query: 193 VQGLENVRLIAV--GAFHNLALQEDGT-LWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGL 249
+ L+ ++++V GA H +A + G +++WG ++G+LG G++ P+P++ L G+
Sbjct: 61 LSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGI 120
Query: 250 TLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDSDKSSKMVPQRVQLLAGEDIVQVS 309
+ IA G H A+T +GEV WGR ++G+LG GD++ S +VPQ++Q G I V+
Sbjct: 121 RIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDS--LVPQKIQAFEGIRIKMVA 178
Query: 310 CGGTHSVALTRDGRMFSFGRGDHGRLGYGRKVTTGQPIEVPINIPPPQNLSGNEADEGHW 369
G H+ A+T DG ++ +G G +G LG G + +P +G E
Sbjct: 179 AGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDR--------LVPERVTSTGGEK----- 225
Query: 370 ISKLVACGGRHTLAI 384
+VACG RHT+++
Sbjct: 226 -MSMVACGWRHTISV 239
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 116/259 (44%), Gaps = 23/259 (8%)
Query: 7 IIAWGSGEDGQLGIGNNEDKEWVCXXXXXXXXXXXXXXXXXXXXLAICDDGKLFTWGWNQ 66
+ +WG ++GQLG+G+ ED A+ +DG L+ WGW +
Sbjct: 141 VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGR 200
Query: 67 RGTLGHPPETKTENIPSQVKALSHVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE 126
G LG T +P +V + K+ A G H ++V G Y +G ++YGQ G
Sbjct: 201 YGNLGLGDRTD-RLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHG 259
Query: 127 PERKDDTGRPLRRDIVIPQR--CAPKLVVRQVAAGGTHSVVLTREGHVWTWG-----QPW 179
D +IP + + Q++ G H++ LT +G ++ WG Q
Sbjct: 260 D----------LEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVG 309
Query: 180 PPGDIKQIS-VPVRVQGLENVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRS 238
++ Q S V VR + V ++ G H LA+ E ++AWG GQLG G++ R+
Sbjct: 310 VGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRN 369
Query: 239 QPIPVQGLSGLTLVDIAAG 257
P ++ LS VD A+G
Sbjct: 370 FPKIIEALS----VDGASG 384
>AT5G60870.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:24485788-24487771 REVERSE
LENGTH=445
Length = 445
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 151/311 (48%), Gaps = 32/311 (10%)
Query: 56 DGKLFTWGWNQRGTLGHPPETKTENIPSQVKALSHVKIVQAAIGGWHCLAVDDQGRAYAW 115
DG L+ WG G LG E +P+ I A+GG H +A+ QG + W
Sbjct: 118 DGDLWIWGKGDGGRLGFGQENSV-FVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTW 176
Query: 116 GGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCAPK--LVVRQVAAGGTHSVVLTREGHVW 173
G +G G + ++ ++P+R + +A GTH+ +T G ++
Sbjct: 177 GYGGFGALGHKVYTRE----------LVPRRVDDSWDCKISAIATSGTHTAAITESGELY 226
Query: 174 TWGQPWPPGDIKQ-------------ISVPVRVQGLE-NVRLIAVGAFHNLALQEDGTLW 219
WG+ GD + +SVP +V+ L V ++ G F +AL ++G LW
Sbjct: 227 MWGRE--EGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASVSCGGFFTMALTKEGQLW 284
Query: 220 AWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHG 279
WG N +LG GD +P+PV L G+ + IA GG+HS ALT++G+V WG G HG
Sbjct: 285 NWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHG 344
Query: 280 RLGFGDSDKSSKMVPQRVQLLAGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRLGY-G 338
+L G S ++ VP ++ LA + IV ++ GG+ S A+T G ++ +G +LG G
Sbjct: 345 QL--GSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGVPG 402
Query: 339 RKVTTGQPIEV 349
P+EV
Sbjct: 403 LPEIQTTPVEV 413
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 146/325 (44%), Gaps = 24/325 (7%)
Query: 10 WGSGEDGQLGIGNNEDKEWVCXXXXXXXXXXXXXXXXXXXXLAICDDGKLFTWGWNQRGT 69
WG G+ G+LG G +A+ G +FTWG+ G
Sbjct: 124 WGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFGA 183
Query: 70 LGHPPETKTENIPSQVKALSHVKIVQAAIGGWHCLAVDDQGRAYAWG---GNEYGQCGEE 126
LGH T+ E +P +V KI A G H A+ + G Y WG G+ G
Sbjct: 184 LGHKVYTR-ELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREEGDGRLGLGPG 242
Query: 127 PERKDDTGRPLRRDIVIPQRCAPKLV-VRQVAAGGTHSVVLTREGHVWTWG----QPWPP 181
+ G + +P + V V V+ GG ++ LT+EG +W WG
Sbjct: 243 RGPNEGGG------LSVPSKVKALTVPVASVSCGGFFTMALTKEGQLWNWGANSNYELGR 296
Query: 182 GDIKQISVPVRVQGLENVRL--IAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQ 239
GD P+ V LE VR+ IA G +H+LAL E+G + +WG+ +GQLG+ + +
Sbjct: 297 GDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKV 356
Query: 240 PIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDSDKSSKMVPQRVQL 299
P ++ L+ +V IA+GG S A+TD GE++ WG + +LG + P V
Sbjct: 357 PTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGV-PGLPEIQTTPVEVNF 415
Query: 300 LAGED------IVQVSCGGTHSVAL 318
L ED ++ +S G +H++ L
Sbjct: 416 LTEEDECQPHKVISISIGASHALCL 440
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 112/232 (48%), Gaps = 26/232 (11%)
Query: 166 LTREGHVWTWGQ----PWPPGDIKQISVPVRVQGLE--NVRLIAVGAFHNLALQEDGTLW 219
LT +G +W WG+ G + VP E ++R IA+G H++AL G ++
Sbjct: 115 LTIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVF 174
Query: 220 AWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGE-- 277
WG +G LG P V + IA G H+ A+T+ GE+Y WGR E
Sbjct: 175 TWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREEGD 234
Query: 278 ---HGRLGFGDSDKSSKMVPQRVQLLAGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGR 334
G G ++ VP +V+ L + VSCGG ++ALT++G+++++G +
Sbjct: 235 GRLGLGPGRGPNEGGGLSVPSKVKALT-VPVASVSCGGFFTMALTKEGQLWNWGANSNYE 293
Query: 335 LGYGRKVTTGQPIEVPINIPPPQNLSGNEADEGHWISKLVACGGRHTLAIVE 386
LG G + +P+ VP + EG I++ +ACGG H+LA+ E
Sbjct: 294 LGRGDNLGGWEPMPVP-------------SLEGVRITQ-IACGGYHSLALTE 331
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 90/191 (47%), Gaps = 41/191 (21%)
Query: 218 LWAWGNNEYGQLGTGDTQPRSQPIPVQGL--------------------SGLTLVDIAAG 257
L++WG GQLG G + R P PV L S + I+ G
Sbjct: 50 LFSWGRGASGQLGGGIEEIRMYPSPVANLLFRSDQSFSLAQTPGRIDADSSSFRIGISCG 109
Query: 258 GWHSTALTDDGEVYGWGRGEHGRLGFGDSDKSSKMVPQRVQLLAGEDIVQVSCGGTHSVA 317
+HS LT DG+++ WG+G+ GRLGFG ++S VP L I ++ GG HSVA
Sbjct: 110 LFHS-GLTIDGDLWIWGKGDGGRLGFG--QENSVFVPNLNPLFEEHSIRCIALGGLHSVA 166
Query: 318 LTRDGRMFSFGRGDHGRLGYGRKVTTGQPIEVPINIPPPQNLSGNEADEGHWISKL--VA 375
LT G +F++G G G LG+ KV T + + P+ + + W K+ +A
Sbjct: 167 LTHQGDVFTWGYGGFGALGH--KVYTRELV--------PRRV------DDSWDCKISAIA 210
Query: 376 CGGRHTLAIVE 386
G HT AI E
Sbjct: 211 TSGTHTAAITE 221
>AT5G60870.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:24485788-24487564 REVERSE
LENGTH=383
Length = 383
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/318 (30%), Positives = 151/318 (47%), Gaps = 39/318 (12%)
Query: 56 DGKLFTWGWNQRGTLGHPPETKTENIPSQVKALSHVKIVQAAIGGWHCLAVDDQGRAYAW 115
DG L+ WG G LG E +P+ I A+GG H +A+ QG + W
Sbjct: 49 DGDLWIWGKGDGGRLGFGQENSV-FVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTW 107
Query: 116 GGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCAPK--LVVRQVAAGGTHSVVLTREGHVW 173
G +G G + ++ ++P+R + +A GTH+ +T G ++
Sbjct: 108 GYGGFGALGHKVYTRE----------LVPRRVDDSWDCKISAIATSGTHTAAITESGELY 157
Query: 174 TWGQPWPPGDIKQ-------------ISVPVRVQGLE-NVRLIAVGAFHNLALQEDGTLW 219
WG+ GD + +SVP +V+ L V ++ G F +AL ++G LW
Sbjct: 158 MWGRE--EGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASVSCGGFFTMALTKEGQLW 215
Query: 220 AWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHG 279
WG N +LG GD +P+PV L G+ + IA GG+HS ALT++G+V WG G HG
Sbjct: 216 NWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHG 275
Query: 280 RLGFGDSDKSSKMVPQRVQLLAGEDIVQVSCGGTHSVA-------LTRDGRMFSFGRGDH 332
+L G S ++ VP ++ LA + IV ++ GG+ S A LT G ++ +G
Sbjct: 276 QL--GSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITGWDWFLTDGGELWMWGNAKD 333
Query: 333 GRLGY-GRKVTTGQPIEV 349
+LG G P+EV
Sbjct: 334 FQLGVPGLPEIQTTPVEV 351
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 146/333 (43%), Gaps = 31/333 (9%)
Query: 10 WGSGEDGQLGIGNNEDKEWVCXXXXXXXXXXXXXXXXXXXXLAICDDGKLFTWGWNQRGT 69
WG G+ G+LG G +A+ G +FTWG+ G
Sbjct: 55 WGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFGA 114
Query: 70 LGHPPETKTENIPSQVKALSHVKIVQAAIGGWHCLAVDDQGRAYAWG---GNEYGQCGEE 126
LGH T+ E +P +V KI A G H A+ + G Y WG G+ G
Sbjct: 115 LGHKVYTR-ELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREEGDGRLGLGPG 173
Query: 127 PERKDDTGRPLRRDIVIPQRCAPKLV-VRQVAAGGTHSVVLTREGHVWTWG----QPWPP 181
+ G + +P + V V V+ GG ++ LT+EG +W WG
Sbjct: 174 RGPNEGGG------LSVPSKVKALTVPVASVSCGGFFTMALTKEGQLWNWGANSNYELGR 227
Query: 182 GDIKQISVPVRVQGLENVRL--IAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQ 239
GD P+ V LE VR+ IA G +H+LAL E+G + +WG+ +GQLG+ + +
Sbjct: 228 GDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKV 287
Query: 240 PIPVQGLSGLTLVDIAAGGWHSTA-------LTDDGEVYGWGRGEHGRLGFGDSDKSSKM 292
P ++ L+ +V IA+GG S A LTD GE++ WG + +LG +
Sbjct: 288 PTEIEALADKKIVFIASGGSSSAAITGWDWFLTDGGELWMWGNAKDFQLGV-PGLPEIQT 346
Query: 293 VPQRVQLLAGED------IVQVSCGGTHSVALT 319
P V L ED ++ +S G +H++ L
Sbjct: 347 TPVEVNFLTEEDECQPHKVISISIGASHALCLV 379
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 112/232 (48%), Gaps = 26/232 (11%)
Query: 166 LTREGHVWTWGQ----PWPPGDIKQISVPVRVQGLE--NVRLIAVGAFHNLALQEDGTLW 219
LT +G +W WG+ G + VP E ++R IA+G H++AL G ++
Sbjct: 46 LTIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVF 105
Query: 220 AWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGE-- 277
WG +G LG P V + IA G H+ A+T+ GE+Y WGR E
Sbjct: 106 TWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREEGD 165
Query: 278 ---HGRLGFGDSDKSSKMVPQRVQLLAGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGR 334
G G ++ VP +V+ L + VSCGG ++ALT++G+++++G +
Sbjct: 166 GRLGLGPGRGPNEGGGLSVPSKVKALT-VPVASVSCGGFFTMALTKEGQLWNWGANSNYE 224
Query: 335 LGYGRKVTTGQPIEVPINIPPPQNLSGNEADEGHWISKLVACGGRHTLAIVE 386
LG G + +P+ VP + EG I++ +ACGG H+LA+ E
Sbjct: 225 LGRGDNLGGWEPMPVP-------------SLEGVRITQ-IACGGYHSLALTE 262
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 73/137 (53%), Gaps = 21/137 (15%)
Query: 252 VDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDSDKSSKMVPQRVQLLAGEDIVQVSCG 311
+ I+ G +HS LT DG+++ WG+G+ GRLGFG ++S VP L I ++ G
Sbjct: 35 IGISCGLFHS-GLTIDGDLWIWGKGDGGRLGFG--QENSVFVPNLNPLFEEHSIRCIALG 91
Query: 312 GTHSVALTRDGRMFSFGRGDHGRLGYGRKVTTGQPIEVPINIPPPQNLSGNEADEGHWIS 371
G HSVALT G +F++G G G LG+ KV T + + P+ + + W
Sbjct: 92 GLHSVALTHQGDVFTWGYGGFGALGH--KVYTRELV--------PRRV------DDSWDC 135
Query: 372 KL--VACGGRHTLAIVE 386
K+ +A G HT AI E
Sbjct: 136 KISAIATSGTHTAAITE 152
>AT3G02300.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:461551-463929 FORWARD
LENGTH=471
Length = 471
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/370 (29%), Positives = 166/370 (44%), Gaps = 58/370 (15%)
Query: 51 LAICDDGKLFTWGWNQRGTLGHPPETKTENIPSQVK-------ALSHVKIVQAAIGGWHC 103
++I ++ WG+NQ G G + K IP Q+ A ++ + + + G H
Sbjct: 14 VSIPTKSAIYVWGYNQSGQTGRNEQEKLLRIPKQLPPELFGCPAGANSRWLDISCGREHT 73
Query: 104 LAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCAPKLVVRQVAAGGTHS 163
AV G +AWG NEYGQ G+ E GR + + Q K V A T +
Sbjct: 74 AAVASDGSLFAWGANEYGQLGDGTE----VGRKHPKKVKQLQSEFVKFV--SCGAFCTAA 127
Query: 164 VVLTRE-------GHVWTWGQPWPPGDIKQIS--VPVRVQGLENVRLIAVGAFHNLALQE 214
+ RE +W WGQ + S P +R ++ G H +AL E
Sbjct: 128 IAEPRENDGTLSTSRLWVWGQNQGSNLPRLFSGAFPATTA----IRQVSCGTAHVVALSE 183
Query: 215 DGTLWAWGNNEYGQLGTGDT-----QPRSQPIPVQGLSG----LTLVDIAAGGWHSTALT 265
+G L AWG NE GQLG G T PR + L + ++ ++ G +H+ AL+
Sbjct: 184 EGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCGEYHTAALS 243
Query: 266 DDGEVYGWGRGEHGRLGFGDSDKSSK-MVPQRVQLLAGEDIVQVSCGGTHSVALTRDGRM 324
D GEVY WG G G+LG K ++P+RV L G + +V+CGG H+ AL+ +G +
Sbjct: 244 DAGEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSMKEVACGGVHTCALSLEGAL 303
Query: 325 FSFGRGDHG------RLGYGRKVTTGQPI---EVPINIPPPQNLSGNEADEGHWISKLVA 375
+++G G G + G+ V+ G + VP+ + P +LVA
Sbjct: 304 YAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVLVIPTD-------------VRLVA 350
Query: 376 CGGRHTLAIV 385
CG HTL +
Sbjct: 351 CGHSHTLVYM 360
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 106/243 (43%), Gaps = 36/243 (14%)
Query: 51 LAICDDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALSH--------VKIVQAAIGGWH 102
+A+ ++G L WG+N++G LG + P + A + VKI+Q + G +H
Sbjct: 179 VALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCGEYH 238
Query: 103 CLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCA--PKLVVRQVAAGG 160
A+ D G Y WG GQ G + D +IP+R + +++VA GG
Sbjct: 239 TAALSDAGEVYTWGLGSMGQLGHVSLQSGDKE-------LIPRRVVGLDGVSMKEVACGG 291
Query: 161 THSVVLTREGHVWTWGQPWP--------PGDIKQIS---------VPVRVQGLENVRLIA 203
H+ L+ EG ++ WG G +S VPV V +VRL+A
Sbjct: 292 VHTCALSLEGALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVLVIP-TDVRLVA 350
Query: 204 VGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTA 263
G H L +G + WG N YGQ + P PV G + +AAGG HS
Sbjct: 351 CGHSHTLVYMREGRICGWGYNSYGQAANEKSSYAWYPSPVDWCVG-QVRKLAAGGGHSAV 409
Query: 264 LTD 266
LTD
Sbjct: 410 LTD 412
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 146/353 (41%), Gaps = 55/353 (15%)
Query: 3 SNSPIIAWGSGEDGQLGIGNNEDKEWVCXXXXXXXXXXXXXXXXXXXXLAICD----DGK 58
S+ + AWG+ E GQLG G ++ AI + DG
Sbjct: 78 SDGSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSCGAFCTAAIAEPRENDGT 137
Query: 59 LFT-----WGWNQRGTLGHPPETKTENIPSQVKALSHVKIVQAAIGGWHCLAVDDQGRAY 113
L T WG NQ L P + P+ I Q + G H +A+ ++G
Sbjct: 138 LSTSRLWVWGQNQGSNL---PRLFSGAFPAT------TAIRQVSCGTAHVVALSEEGLLQ 188
Query: 114 AWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRC-----APKLV-VRQVAAGGTHSVVLT 167
AWG NE GQ G + T L+ VI AP+LV + Q++ G H+ L+
Sbjct: 189 AWGYNEQGQLG-----RGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCGEYHTAALS 243
Query: 168 REGHVWTWGQPWPPGDIKQIS--------VPVRVQGLENVRL--IAVGAFHNLALQEDGT 217
G V+TWG G + +S +P RV GL+ V + +A G H AL +G
Sbjct: 244 DAGEVYTWGLG-SMGQLGHVSLQSGDKELIPRRVVGLDGVSMKEVACGGVHTCALSLEGA 302
Query: 218 LWAWGNNEYG------QLGTGDTQPRSQPIPVQGLSGLTLVD----IAAGGWHSTALTDD 267
L+AWG + G Q G + + ++ + L + +A G H+ +
Sbjct: 303 LYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVLVIPTDVRLVACGHSHTLVYMRE 362
Query: 268 GEVYGWGRGEHGRLGFGDSDKSSKM-VPQRVQLLAGEDIVQVSCGGTHSVALT 319
G + GWG +G+ ++KSS P V G+ + +++ GG HS LT
Sbjct: 363 GRICGWGYNSYGQ---AANEKSSYAWYPSPVDWCVGQ-VRKLAAGGGHSAVLT 411
>AT3G26100.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:9538063-9540149 FORWARD
LENGTH=532
Length = 532
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 165/367 (44%), Gaps = 44/367 (11%)
Query: 1 MDSNSPIIAWGSGEDGQLGIGNNEDKEWVCXXXXXXXXXXXXXXXXXXXXLAICDDGKLF 60
+ S + +G GQLG G+ ED+ + + I DDGK++
Sbjct: 158 VTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAARTMLISDDGKVY 217
Query: 61 TWGWNQRGTLGHPPE-TKTENIPSQVKALSHVKIVQAAIGGWHCLAVDDQGRAYAWGGNE 119
G G + + TK P V +L ++ +VQAAIG + + +G+ Y +
Sbjct: 218 ACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWGN 277
Query: 120 YGQCGEEPERKDDTGRPLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLT------------ 167
G+ G + E D RPL + P P V Q+AAG + + L
Sbjct: 278 DGRLGHQTEAADVEPRPL----LGPLENVP---VVQIAAGYCYLLALACQPNGMSVYSVG 330
Query: 168 -----REGHVWTWGQPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALQEDGTLWAWG 222
+ GH + +P I+Q + + +Q R++A GA+H + +DG + WG
Sbjct: 331 CGLGGKLGHGSRTDEKYPR-VIEQFQI-LNLQP----RVVAAGAWHAAVVGQDGRVCTWG 384
Query: 223 NNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLG 282
YG LG G+ + S P V+GLS + V +A G + + ++DDG+VY +G GE LG
Sbjct: 385 WGRYGCLGHGNEECESVPKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLG 444
Query: 283 FGDS------DKSSKMVPQRVQLL--AGEDIVQVSCGGT-----HSVALTRDGRMFSFGR 329
S ++ + P V L E +VQ+S + H+ ALT G++F+FG
Sbjct: 445 HHPSFDEQGNRHANVLSPTVVTSLKQVNERMVQISLTNSIYWNAHTFALTESGKLFAFGA 504
Query: 330 GDHGRLG 336
GD G+LG
Sbjct: 505 GDQGQLG 511
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 147/305 (48%), Gaps = 33/305 (10%)
Query: 51 LAICDDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALSHVKIVQAAIGGWHCLAVDDQG 110
+A+ G+++T+G+N G LGH T+ E V++L V+I+QAA G + + D G
Sbjct: 156 VAVTSKGEVYTFGYNNSGQLGHG-HTEDEARIQPVRSLQGVRIIQAAAGAARTMLISDDG 214
Query: 111 RAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCAP--KLVVRQVAAGGTHSVVLTR 168
+ YA G +G E E +P + PQ + V Q A G + VL+R
Sbjct: 215 KVYACGKESFG----EAEYGGQGTKP----VTTPQLVTSLKNIFVVQAAIGNYFTAVLSR 266
Query: 169 EGHVWTW--------GQPWPPGDIKQISVPVRVQG-LENVRLIAVGA----FHNLALQED 215
EG V+T+ G D++ P + G LENV ++ + A LA Q +
Sbjct: 267 EGKVYTFSWGNDGRLGHQTEAADVE----PRPLLGPLENVPVVQIAAGYCYLLALACQPN 322
Query: 216 G-TLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVD--IAAGGWHSTALTDDGEVYG 272
G ++++ G G+LG G P ++ L L +AAG WH+ + DG V
Sbjct: 323 GMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDGRVCT 382
Query: 273 WGRGEHGRLGFGDSDKSSKMVPQRVQLLAGEDIVQVSCGGTHSVALTRDGRMFSFGRGDH 332
WG G +G LG G+ + S VP+ V+ L+ V V+ G + ++ DG ++SFG G+
Sbjct: 383 WGWGRYGCLGHGNEECES--VPKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYSFGCGES 440
Query: 333 GRLGY 337
LG+
Sbjct: 441 ASLGH 445
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 87/169 (51%), Gaps = 3/169 (1%)
Query: 208 HNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDD 267
H++A+ G ++ +G N GQLG G T+ ++ PV+ L G+ ++ AAG + ++DD
Sbjct: 154 HSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAARTMLISDD 213
Query: 268 GEVYGWGRGEHGRLGFGDSDKSSKMVPQRVQLLAGEDIVQVSCGGTHSVALTRDGRMFSF 327
G+VY G+ G +G PQ V L +VQ + G + L+R+G++++F
Sbjct: 214 GKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTF 273
Query: 328 GRGDHGRLGYGRKVTTGQPIEVPINIPPPQNLSGNEADEGHWISKLVAC 376
G+ GRLG+ + +P + + P +N+ + G+ +AC
Sbjct: 274 SWGNDGRLGHQTEAADVEPRPL---LGPLENVPVVQIAAGYCYLLALAC 319
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 129/267 (48%), Gaps = 26/267 (9%)
Query: 95 QAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCAPKLVVR 154
QA G H +AV +G Y +G N GQ G +D R + P R + +
Sbjct: 147 QAVAGPGHSVAVTSKGEVYTFGYNNSGQLGHG--HTEDEAR------IQPVRSLQGVRII 198
Query: 155 QVAAGGTHSVVLTREGHVWTWGQP------WPPGDIKQISVPVRVQGLENVRLI--AVGA 206
Q AAG +++++ +G V+ G+ + K ++ P V L+N+ ++ A+G
Sbjct: 199 QAAAGAARTMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGN 258
Query: 207 FHNLALQEDGTLW--AWGNNEYGQLGTGDTQPRSQPIPVQG-LSGLTLVDIAAGGWHSTA 263
+ L +G ++ +WGN+ G+LG +P P+ G L + +V IAAG + A
Sbjct: 259 YFTAVLSREGKVYTFSWGND--GRLGHQTEAADVEPRPLLGPLENVPVVQIAAGYCYLLA 316
Query: 264 LT---DDGEVYGWGRGEHGRLGFGD-SDKSSKMVPQRVQLLAGEDIVQVSCGGTHSVALT 319
L + VY G G G+LG G +D+ V ++ Q+L + V V+ G H+ +
Sbjct: 317 LACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRV-VAAGAWHAAVVG 375
Query: 320 RDGRMFSFGRGDHGRLGYGRKVTTGQP 346
+DGR+ ++G G +G LG+G + P
Sbjct: 376 QDGRVCTWGWGRYGCLGHGNEECESVP 402
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 69/124 (55%), Gaps = 4/124 (3%)
Query: 256 AGGWHSTALTDDGEVYGWGRGEHGRLGFGDSDKSSKMVPQRVQLLAGEDIVQVSCGGTHS 315
AG HS A+T GEVY +G G+LG G ++ +++ P V+ L G I+Q + G +
Sbjct: 150 AGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQP--VRSLQGVRIIQAAAGAART 207
Query: 316 VALTRDGRMFSFGRGDHGRLGYGRKVTTGQPIEVPINIPPPQNLSGNEADEGHWISKLVA 375
+ ++ DG++++ G+ G YG + T +P+ P + +N+ +A G++ + +++
Sbjct: 208 MLISDDGKVYACGKESFGEAEYGGQGT--KPVTTPQLVTSLKNIFVVQAAIGNYFTAVLS 265
Query: 376 CGGR 379
G+
Sbjct: 266 REGK 269
>AT3G26100.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:9538458-9540149 FORWARD
LENGTH=432
Length = 432
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 164/361 (45%), Gaps = 32/361 (8%)
Query: 1 MDSNSPIIAWGSGEDGQLGIGNNEDKEWVCXXXXXXXXXXXXXXXXXXXXLAICDDGKLF 60
+ S + +G GQLG G+ ED+ + + I DDGK++
Sbjct: 58 VTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAARTMLISDDGKVY 117
Query: 61 TWGWNQRGTLGHPPE-TKTENIPSQVKALSHVKIVQAAIGGWHCLAVDDQGRAYAWGGNE 119
G G + + TK P V +L ++ +VQAAIG + + +G+ Y +
Sbjct: 118 ACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWGN 177
Query: 120 YGQCGEEPERKDDTGRPLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTREGH---VWT-- 174
G+ G + E D RPL + P P V Q+AAG + + L + + V++
Sbjct: 178 DGRLGHQTEAADVEPRPL----LGPLENVP---VVQIAAGYCYLLALACQPNGMSVYSVG 230
Query: 175 --WGQPWPPGDIKQISVPVRVQGLENV----RLIAVGAFHNLALQEDGTLWAWGNNEYGQ 228
G G P ++ + + R++A GA+H + +DG + WG YG
Sbjct: 231 CGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
Query: 229 LGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDS-- 286
LG G+ + S P V+GLS + V +A G + + ++DDG+VY +G GE LG S
Sbjct: 291 LGHGNEECESVPKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHHPSFD 350
Query: 287 ----DKSSKMVPQRVQLL--AGEDIVQVSCGGT-----HSVALTRDGRMFSFGRGDHGRL 335
++ + P V L E +VQ+S + H+ ALT G++F+FG GD G+L
Sbjct: 351 EQGNRHANVLSPTVVTSLKQVNERMVQISLTNSIYWNAHTFALTESGKLFAFGAGDQGQL 410
Query: 336 G 336
G
Sbjct: 411 G 411
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 148/301 (49%), Gaps = 25/301 (8%)
Query: 51 LAICDDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALSHVKIVQAAIGGWHCLAVDDQG 110
+A+ G+++T+G+N G LGH T+ E V++L V+I+QAA G + + D G
Sbjct: 56 VAVTSKGEVYTFGYNNSGQLGHG-HTEDEARIQPVRSLQGVRIIQAAAGAARTMLISDDG 114
Query: 111 RAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCAP--KLVVRQVAAGGTHSVVLTR 168
+ YA CG+E + + G + + PQ + V Q A G + VL+R
Sbjct: 115 KVYA--------CGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSR 166
Query: 169 EGHVWT--WGQPWPPGDIKQIS--VPVRVQG-LENVRLIAVGA----FHNLALQEDG-TL 218
EG V+T WG G + + P + G LENV ++ + A LA Q +G ++
Sbjct: 167 EGKVYTFSWGNDGRLGHQTEAADVEPRPLLGPLENVPVVQIAAGYCYLLALACQPNGMSV 226
Query: 219 WAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVD--IAAGGWHSTALTDDGEVYGWGRG 276
++ G G+LG G P ++ L L +AAG WH+ + DG V WG G
Sbjct: 227 YSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDGRVCTWGWG 286
Query: 277 EHGRLGFGDSDKSSKMVPQRVQLLAGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRLG 336
+G LG G+ + S VP+ V+ L+ V V+ G + ++ DG ++SFG G+ LG
Sbjct: 287 RYGCLGHGNEECES--VPKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLG 344
Query: 337 Y 337
+
Sbjct: 345 H 345
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 87/169 (51%), Gaps = 3/169 (1%)
Query: 208 HNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDD 267
H++A+ G ++ +G N GQLG G T+ ++ PV+ L G+ ++ AAG + ++DD
Sbjct: 54 HSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAARTMLISDD 113
Query: 268 GEVYGWGRGEHGRLGFGDSDKSSKMVPQRVQLLAGEDIVQVSCGGTHSVALTRDGRMFSF 327
G+VY G+ G +G PQ V L +VQ + G + L+R+G++++F
Sbjct: 114 GKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTF 173
Query: 328 GRGDHGRLGYGRKVTTGQPIEVPINIPPPQNLSGNEADEGHWISKLVAC 376
G+ GRLG+ + +P + + P +N+ + G+ +AC
Sbjct: 174 SWGNDGRLGHQTEAADVEPRPL---LGPLENVPVVQIAAGYCYLLALAC 219
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 129/267 (48%), Gaps = 26/267 (9%)
Query: 95 QAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCAPKLVVR 154
QA G H +AV +G Y +G N GQ G +D R + P R + +
Sbjct: 47 QAVAGPGHSVAVTSKGEVYTFGYNNSGQLGHG--HTEDEAR------IQPVRSLQGVRII 98
Query: 155 QVAAGGTHSVVLTREGHVWTWGQP------WPPGDIKQISVPVRVQGLENVRLI--AVGA 206
Q AAG +++++ +G V+ G+ + K ++ P V L+N+ ++ A+G
Sbjct: 99 QAAAGAARTMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGN 158
Query: 207 FHNLALQEDGTLW--AWGNNEYGQLGTGDTQPRSQPIPVQG-LSGLTLVDIAAGGWHSTA 263
+ L +G ++ +WGN+ G+LG +P P+ G L + +V IAAG + A
Sbjct: 159 YFTAVLSREGKVYTFSWGND--GRLGHQTEAADVEPRPLLGPLENVPVVQIAAGYCYLLA 216
Query: 264 LT---DDGEVYGWGRGEHGRLGFGD-SDKSSKMVPQRVQLLAGEDIVQVSCGGTHSVALT 319
L + VY G G G+LG G +D+ V ++ Q+L + V V+ G H+ +
Sbjct: 217 LACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRV-VAAGAWHAAVVG 275
Query: 320 RDGRMFSFGRGDHGRLGYGRKVTTGQP 346
+DGR+ ++G G +G LG+G + P
Sbjct: 276 QDGRVCTWGWGRYGCLGHGNEECESVP 302
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 69/124 (55%), Gaps = 4/124 (3%)
Query: 256 AGGWHSTALTDDGEVYGWGRGEHGRLGFGDSDKSSKMVPQRVQLLAGEDIVQVSCGGTHS 315
AG HS A+T GEVY +G G+LG G ++ +++ P V+ L G I+Q + G +
Sbjct: 50 AGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQP--VRSLQGVRIIQAAAGAART 107
Query: 316 VALTRDGRMFSFGRGDHGRLGYGRKVTTGQPIEVPINIPPPQNLSGNEADEGHWISKLVA 375
+ ++ DG++++ G+ G YG + T +P+ P + +N+ +A G++ + +++
Sbjct: 108 MLISDDGKVYACGKESFGEAEYGGQGT--KPVTTPQLVTSLKNIFVVQAAIGNYFTAVLS 165
Query: 376 CGGR 379
G+
Sbjct: 166 REGK 169
>AT5G19420.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr5:6547945-6552981 REVERSE LENGTH=1139
Length = 1139
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 155/355 (43%), Gaps = 44/355 (12%)
Query: 53 ICDDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALSHVKIVQAAIGGWHCLAVDDQGRA 112
+ G+ F+WG G LGH ++ ++ P + AL+ I A G +H AV G
Sbjct: 361 VTKQGESFSWGEESEGRLGHGVDSNVQH-PKLIDALNTTNIELVACGEYHSCAVTLSGDL 419
Query: 113 YAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTREGHV 172
Y WG ++G G E P R + ++ + V +A G H+ V+T G +
Sbjct: 420 YTWGKGDFGILGHGNEVSHWV--PKRVNFLMEG-----IHVSSIACGPYHTAVVTSAGQL 472
Query: 173 WTWGQ----PWPPGDIKQISVPVRVQGLENVRLI--AVGAFHNLALQE------------ 214
+T+G GD K + +P V L+ +R + A G +H A+ E
Sbjct: 473 FTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS 532
Query: 215 DGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWG 274
G L+ WG+ + +LG GD +P+ P V L +A G + ALT G VY G
Sbjct: 533 SGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMG 592
Query: 275 RGEHGRLGFGDSDKSSKMVPQRVQ-LLAGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHG 333
+G+LG +D VP RV L + +++CG H LT ++++G+G +G
Sbjct: 593 SPVYGQLGNPHADGK---VPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNG 649
Query: 334 RLGYGRKVTTGQPIEVPINIPPPQNLSGNEADEGHWISKLVACGGRHTLAIVEWK 388
RLG+G P V ++L + K +ACG T A+ K
Sbjct: 650 RLGHGDADDRNSPTLV-------ESLKDKQV-------KSIACGSNFTAAVCLHK 690
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 136/291 (46%), Gaps = 38/291 (13%)
Query: 70 LGHPPETKTENI-PSQVKALSHVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPE 128
+G E K +++ P +++ + + A GG H + V QG +++WG G+ G +
Sbjct: 324 VGSSLEIKMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVD 383
Query: 129 RKDDTGRPLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI---- 184
+ P D + + VA G HS +T G ++TWG+ GD
Sbjct: 384 --SNVQHPKLIDALNTTN------IELVACGEYHSCAVTLSGDLYTWGK----GDFGILG 431
Query: 185 --KQIS--VPVRVQGLE---NVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPR 237
++S VP RV L +V IA G +H + G L+ +G+ +G LG GD +
Sbjct: 432 HGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSV 491
Query: 238 SQPIPVQGLSGLTLVDIAAGGWHSTALTD------------DGEVYGWGRGEHGRLGFGD 285
P V L GL V A G WH+ A+ + G+++ WG G+ RLG G
Sbjct: 492 FIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHG- 550
Query: 286 SDKSSKMVPQRVQLLAGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRLG 336
DK K+VP V L + QV+CG + +VALT G +++ G +G+LG
Sbjct: 551 -DKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLG 600
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 119/240 (49%), Gaps = 23/240 (9%)
Query: 137 LRRDIVIPQRCAPKLV--VRQVAAGGTHSVVLTREGHVWTWGQPWP----PGDIKQISVP 190
++ D ++P+ +V V+ +A GG H+V++T++G ++WG+ G + P
Sbjct: 330 IKMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHP 389
Query: 191 VRVQGLE--NVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGL-S 247
+ L N+ L+A G +H+ A+ G L+ WG ++G LG G+ P V L
Sbjct: 390 KLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLME 449
Query: 248 GLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDSDKSSKMVPQRVQLLAGEDIVQ 307
G+ + IA G +H+ +T G+++ +G G G LG G D+ S +P+ V L G V+
Sbjct: 450 GIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHG--DRKSVFIPREVDSLKGLRTVR 507
Query: 308 VSCGGTHSVALTR------------DGRMFSFGRGDHGRLGYGRKVTTGQPIEVPINIPP 355
+CG H+ A+ G++F++G GD RLG+G K P V + P
Sbjct: 508 AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEP 567
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 98/193 (50%), Gaps = 17/193 (8%)
Query: 198 NVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAG 257
+V+ IA G H + + + G ++WG G+LG G P + L+ + +A G
Sbjct: 347 DVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVACG 406
Query: 258 GWHSTALTDDGEVYGWGRGEHGRLGFGDSDKSSKMVPQRVQ-LLAGEDIVQVSCGGTHSV 316
+HS A+T G++Y WG+G+ G LG G ++ S VP+RV L+ G + ++CG H+
Sbjct: 407 EYHSCAVTLSGDLYTWGKGDFGILGHG--NEVSHWVPKRVNFLMEGIHVSSIACGPYHTA 464
Query: 317 ALTRDGRMFSFGRGDHGRLGYGRKVTTGQPIEVPINIPPPQNLSGNEADEGHWISKLVAC 376
+T G++F+FG G G LG+G + + P EV +L G AC
Sbjct: 465 VVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREV-------DSLKGLRTVRA-------AC 510
Query: 377 GGRHTLAIVEWKV 389
G HT A+VE V
Sbjct: 511 GVWHTAAVVEVMV 523
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 124/299 (41%), Gaps = 52/299 (17%)
Query: 7 IIAWGSGEDGQLGIGNNEDKEWVCXXXXXXXXXXXXXXXXX--XXXLAICDDGKLFTWGW 64
+ WG G+ G LG G NE WV + G+LFT+G
Sbjct: 419 LYTWGKGDFGILGHG-NEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGD 477
Query: 65 NQRGTLGHPPETKTENIPSQVKALSHVKIVQAAIGGWHCLAVDD------------QGRA 112
G LGH + K+ IP +V +L ++ V+AA G WH AV + G+
Sbjct: 478 GTFGVLGH-GDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 536
Query: 113 YAWGGNEYGQCG---EEPERKDDTGRPLRRDIVIPQRCAPKLV---VRQVAAGGTHSVVL 166
+ WG + + G +EP+ ++P C LV QVA G + +V L
Sbjct: 537 FTWGDGDKSRLGHGDKEPK-------------LVPT-CVAALVEPNFCQVACGHSLTVAL 582
Query: 167 TREGHVWTWGQPW------PPGDIKQISVPVRVQGLEN---VRLIAVGAFHNLALQEDGT 217
T GHV+T G P P D K VP RV G + V IA GA+H L
Sbjct: 583 TTSGHVYTMGSPVYGQLGNPHADGK---VPTRVDGKLHKSFVEEIACGAYHVAVLTSRTE 639
Query: 218 LWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRG 276
++ WG G+LG GD R+ P V+ L + IA G + A+ ++ W G
Sbjct: 640 VYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAVC----LHKWASG 694
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 72/146 (49%), Gaps = 15/146 (10%)
Query: 240 PIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDSDKSSKMVPQRVQL 299
P ++ L + +IA GG H+ +T GE + WG GRLG G S+ P+ +
Sbjct: 337 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVD--SNVQHPKLIDA 394
Query: 300 LAGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKVTTGQPIEVPINIPPPQNL 359
L +I V+CG HS A+T G ++++G+GD G LG+G +V+ P V
Sbjct: 395 LNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRV---------- 444
Query: 360 SGNEADEGHWISKLVACGGRHTLAIV 385
N EG +S +ACG HT +
Sbjct: 445 --NFLMEGIHVSS-IACGPYHTAVVT 467
>AT5G19420.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr5:6547945-6552866 REVERSE LENGTH=1105
Length = 1105
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 155/355 (43%), Gaps = 44/355 (12%)
Query: 53 ICDDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALSHVKIVQAAIGGWHCLAVDDQGRA 112
+ G+ F+WG G LGH ++ ++ P + AL+ I A G +H AV G
Sbjct: 327 VTKQGESFSWGEESEGRLGHGVDSNVQH-PKLIDALNTTNIELVACGEYHSCAVTLSGDL 385
Query: 113 YAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTREGHV 172
Y WG ++G G E P R + ++ + V +A G H+ V+T G +
Sbjct: 386 YTWGKGDFGILGHGNEVSHWV--PKRVNFLME-----GIHVSSIACGPYHTAVVTSAGQL 438
Query: 173 WTWGQ----PWPPGDIKQISVPVRVQGLENVRLI--AVGAFHNLALQE------------ 214
+T+G GD K + +P V L+ +R + A G +H A+ E
Sbjct: 439 FTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS 498
Query: 215 DGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWG 274
G L+ WG+ + +LG GD +P+ P V L +A G + ALT G VY G
Sbjct: 499 SGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMG 558
Query: 275 RGEHGRLGFGDSDKSSKMVPQRVQ-LLAGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHG 333
+G+LG +D VP RV L + +++CG H LT ++++G+G +G
Sbjct: 559 SPVYGQLGNPHADGK---VPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNG 615
Query: 334 RLGYGRKVTTGQPIEVPINIPPPQNLSGNEADEGHWISKLVACGGRHTLAIVEWK 388
RLG+G P V ++L + K +ACG T A+ K
Sbjct: 616 RLGHGDADDRNSPTLV-------ESLKDKQV-------KSIACGSNFTAAVCLHK 656
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 130/286 (45%), Gaps = 51/286 (17%)
Query: 81 IPSQVKALSHVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRD 140
+P +++ + + A GG H + V QG +++WG G+ G
Sbjct: 302 LPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHG-------------- 347
Query: 141 IVIPQRCAPKLV-------VRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI------KQI 187
V PKL+ + VA G HS +T G ++TWG+ GD ++
Sbjct: 348 -VDSNVQHPKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGK----GDFGILGHGNEV 402
Query: 188 S--VPVRVQGLE---NVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIP 242
S VP RV L +V IA G +H + G L+ +G+ +G LG GD + P
Sbjct: 403 SHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPRE 462
Query: 243 VQGLSGLTLVDIAAGGWHSTALTD------------DGEVYGWGRGEHGRLGFGDSDKSS 290
V L GL V A G WH+ A+ + G+++ WG G+ RLG G DK
Sbjct: 463 VDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHG--DKEP 520
Query: 291 KMVPQRVQLLAGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRLG 336
K+VP V L + QV+CG + +VALT G +++ G +G+LG
Sbjct: 521 KLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLG 566
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 119/240 (49%), Gaps = 23/240 (9%)
Query: 137 LRRDIVIPQRCAPKLV--VRQVAAGGTHSVVLTREGHVWTWGQPWP----PGDIKQISVP 190
++ D ++P+ +V V+ +A GG H+V++T++G ++WG+ G + P
Sbjct: 296 IKMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHP 355
Query: 191 VRVQGLE--NVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGL-S 247
+ L N+ L+A G +H+ A+ G L+ WG ++G LG G+ P V L
Sbjct: 356 KLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLME 415
Query: 248 GLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDSDKSSKMVPQRVQLLAGEDIVQ 307
G+ + IA G +H+ +T G+++ +G G G LG G D+ S +P+ V L G V+
Sbjct: 416 GIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHG--DRKSVFIPREVDSLKGLRTVR 473
Query: 308 VSCGGTHSVALTR------------DGRMFSFGRGDHGRLGYGRKVTTGQPIEVPINIPP 355
+CG H+ A+ G++F++G GD RLG+G K P V + P
Sbjct: 474 AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEP 533
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 99/193 (51%), Gaps = 17/193 (8%)
Query: 198 NVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAG 257
+V+ IA G H + + + G ++WG G+LG G P + L+ + +A G
Sbjct: 313 DVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVACG 372
Query: 258 GWHSTALTDDGEVYGWGRGEHGRLGFGDSDKSSKMVPQRVQ-LLAGEDIVQVSCGGTHSV 316
+HS A+T G++Y WG+G+ G LG G ++ S VP+RV L+ G + ++CG H+
Sbjct: 373 EYHSCAVTLSGDLYTWGKGDFGILGHG--NEVSHWVPKRVNFLMEGIHVSSIACGPYHTA 430
Query: 317 ALTRDGRMFSFGRGDHGRLGYGRKVTTGQPIEVPINIPPPQNLSGNEADEGHWISKLVAC 376
+T G++F+FG G G LG+G + + P EV +L G + AC
Sbjct: 431 VVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREV-------DSLKG-------LRTVRAAC 476
Query: 377 GGRHTLAIVEWKV 389
G HT A+VE V
Sbjct: 477 GVWHTAAVVEVMV 489
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 124/299 (41%), Gaps = 52/299 (17%)
Query: 7 IIAWGSGEDGQLGIGNNEDKEWVCXXXXXXXXXXXXXXXXX--XXXLAICDDGKLFTWGW 64
+ WG G+ G LG G NE WV + G+LFT+G
Sbjct: 385 LYTWGKGDFGILGHG-NEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGD 443
Query: 65 NQRGTLGHPPETKTENIPSQVKALSHVKIVQAAIGGWHCLAVDD------------QGRA 112
G LGH + K+ IP +V +L ++ V+AA G WH AV + G+
Sbjct: 444 GTFGVLGH-GDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 502
Query: 113 YAWGGNEYGQCG---EEPERKDDTGRPLRRDIVIPQRCAPKLV---VRQVAAGGTHSVVL 166
+ WG + + G +EP+ ++P C LV QVA G + +V L
Sbjct: 503 FTWGDGDKSRLGHGDKEPK-------------LVPT-CVAALVEPNFCQVACGHSLTVAL 548
Query: 167 TREGHVWTWGQPW------PPGDIKQISVPVRVQGLEN---VRLIAVGAFHNLALQEDGT 217
T GHV+T G P P D K VP RV G + V IA GA+H L
Sbjct: 549 TTSGHVYTMGSPVYGQLGNPHADGK---VPTRVDGKLHKSFVEEIACGAYHVAVLTSRTE 605
Query: 218 LWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRG 276
++ WG G+LG GD R+ P V+ L + IA G + A+ ++ W G
Sbjct: 606 VYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAVC----LHKWASG 660
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 72/146 (49%), Gaps = 15/146 (10%)
Query: 240 PIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDSDKSSKMVPQRVQL 299
P ++ L + +IA GG H+ +T GE + WG GRLG G S+ P+ +
Sbjct: 303 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVD--SNVQHPKLIDA 360
Query: 300 LAGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKVTTGQPIEVPINIPPPQNL 359
L +I V+CG HS A+T G ++++G+GD G LG+G +V+ P V
Sbjct: 361 LNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRV---------- 410
Query: 360 SGNEADEGHWISKLVACGGRHTLAIV 385
N EG +S +ACG HT +
Sbjct: 411 --NFLMEGIHVSS-IACGPYHTAVVT 433
>AT5G12350.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr5:3995789-4000545 FORWARD LENGTH=1075
Length = 1075
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 156/353 (44%), Gaps = 44/353 (12%)
Query: 51 LAICDDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALSHVKIVQAAIGGWHCLAVDDQG 110
+ + G+ F+WG G LGH ++ + P + AL+ I A G +H AV G
Sbjct: 321 VLVTKQGESFSWGEESEGRLGHGVDSNIQQ-PKLIDALNTTNIELVACGEFHSCAVTLSG 379
Query: 111 RAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTREG 170
Y WG ++G G E P R + ++ + V +A G H+ V+T G
Sbjct: 380 DLYTWGKGDFGVLGHGNEVSHWV--PKRVNFLLE-----GIHVSSIACGPYHTAVVTSAG 432
Query: 171 HVWTWGQ----PWPPGDIKQISVPVRVQGLENVRLI--AVGAFHNLALQE---------- 214
++T+G GD K + +P V L+ +R + A G +H A+ E
Sbjct: 433 QLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSN 492
Query: 215 --DGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYG 272
G L+ WG+ + G+LG G+ +P+ P V L +A G + ALT G VY
Sbjct: 493 CSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYT 552
Query: 273 WGRGEHGRLGFGDSDKSSKMVPQRVQ-LLAGEDIVQVSCGGTHSVALTRDGRMFSFGRGD 331
G +G+LG +D + P RV+ L + +++CG H LT ++++G+G
Sbjct: 553 MGSPVYGQLGNSHADGKT---PNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGS 609
Query: 332 HGRLGYGRKVTTGQPIEVPINIPPPQNLSGNEADEGHWISKLVACGGRHTLAI 384
+GRLG+G P V ++L + K +ACG T A+
Sbjct: 610 NGRLGHGDVDDRNSPTLV-------ESLKDKQV-------KSIACGTNFTAAV 648
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 133/286 (46%), Gaps = 51/286 (17%)
Query: 81 IPSQVKALSHVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRD 140
+P +++ + + A GG H + V QG +++WG G+ G D
Sbjct: 298 LPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGV------------D 345
Query: 141 IVIPQRCAPKLV-------VRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI------KQI 187
I Q PKL+ + VA G HS +T G ++TWG+ GD ++
Sbjct: 346 SNIQQ---PKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGK----GDFGVLGHGNEV 398
Query: 188 S--VPVRVQGLE---NVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIP 242
S VP RV L +V IA G +H + G L+ +G+ +G LG GD + P
Sbjct: 399 SHWVPKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPRE 458
Query: 243 VQGLSGLTLVDIAAGGWHSTALTD------------DGEVYGWGRGEHGRLGFGDSDKSS 290
V L GL V A G WH+ A+ + G+++ WG G+ GRLG G +K
Sbjct: 459 VDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHG--NKEP 516
Query: 291 KMVPQRVQLLAGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRLG 336
K+VP V L + QV+CG + +VALT G +++ G +G+LG
Sbjct: 517 KLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLG 562
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 127/267 (47%), Gaps = 23/267 (8%)
Query: 110 GRAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCAPKLV--VRQVAAGGTHSVVLT 167
G + WG R+ + ++ D ++P+ +V V+ +A GG H+V++T
Sbjct: 265 GDVFIWGEGIGEGVLGGGNRRVGSSFDIKMDSLLPKALESTIVLDVQNIACGGQHAVLVT 324
Query: 168 REGHVWTWGQPWP----PGDIKQISVPVRVQGLE--NVRLIAVGAFHNLALQEDGTLWAW 221
++G ++WG+ G I P + L N+ L+A G FH+ A+ G L+ W
Sbjct: 325 KQGESFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTW 384
Query: 222 GNNEYGQLGTGDTQPRSQPIPVQG-LSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGR 280
G ++G LG G+ P V L G+ + IA G +H+ +T G+++ +G G G
Sbjct: 385 GKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGV 444
Query: 281 LGFGDSDKSSKMVPQRVQLLAGEDIVQVSCGGTHSVALTR------------DGRMFSFG 328
LG G DK S +P+ V L G V+ +CG H+ A+ G++F++G
Sbjct: 445 LGHG--DKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 502
Query: 329 RGDHGRLGYGRKVTTGQPIEVPINIPP 355
GD GRLG+G K P V + P
Sbjct: 503 DGDKGRLGHGNKEPKLVPTCVAALVEP 529
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 100/193 (51%), Gaps = 17/193 (8%)
Query: 198 NVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAG 257
+V+ IA G H + + + G ++WG G+LG G QP + L+ + +A G
Sbjct: 309 DVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACG 368
Query: 258 GWHSTALTDDGEVYGWGRGEHGRLGFGDSDKSSKMVPQRVQ-LLAGEDIVQVSCGGTHSV 316
+HS A+T G++Y WG+G+ G LG G ++ S VP+RV LL G + ++CG H+
Sbjct: 369 EFHSCAVTLSGDLYTWGKGDFGVLGHG--NEVSHWVPKRVNFLLEGIHVSSIACGPYHTA 426
Query: 317 ALTRDGRMFSFGRGDHGRLGYGRKVTTGQPIEVPINIPPPQNLSGNEADEGHWISKLVAC 376
+T G++F+FG G G LG+G K + P EV +L G + AC
Sbjct: 427 VVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREV-------DSLKG-------LRTVRAAC 472
Query: 377 GGRHTLAIVEWKV 389
G HT A+VE V
Sbjct: 473 GVWHTAAVVEVMV 485
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 133/333 (39%), Gaps = 36/333 (10%)
Query: 8 IAWGSGEDGQLGIGNNEDKEWVCXXXXXXXXXXXXXXXXXXXXLAICDDGKLFTWGWNQR 67
+WG +G+LG G + + + A+ G L+TWG
Sbjct: 330 FSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDF 389
Query: 68 GTLGHPPETKTENIPSQVKALSH-VKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE 126
G LGH E + +P +V L + + A G +H V G+ + +G +G G
Sbjct: 390 GVLGHGNEV-SHWVPKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHG 448
Query: 127 PERKDDTGRPLRRDIVIPQRCAPKLVVRQVAAG--------------GTHSVVLTREGHV 172
++ + IP+ +R V A G+ S G +
Sbjct: 449 D----------KKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 498
Query: 173 WTWGQ----PWPPGDIKQISVPVRVQGLENVRLIAVGAFHNL--ALQEDGTLWAWGNNEY 226
+TWG G+ + VP V L V H+L AL G ++ G+ Y
Sbjct: 499 FTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVY 558
Query: 227 GQLGTGDTQPRSQPIPVQGLSGLTLVD-IAAGGWHSTALTDDGEVYGWGRGEHGRLGFGD 285
GQLG ++ P V+G + V+ IA G +H LT EVY WG+G +GRLG GD
Sbjct: 559 GQLGNSHADGKT-PNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGD 617
Query: 286 SDKSSKMVPQRVQLLAGEDIVQVSCGGTHSVAL 318
D + P V+ L + + ++CG + A+
Sbjct: 618 VD--DRNSPTLVESLKDKQVKSIACGTNFTAAV 648
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 124/299 (41%), Gaps = 52/299 (17%)
Query: 7 IIAWGSGEDGQLGIGNNEDKEWVCXXXXXXXXXXXXXXXXX--XXXLAICDDGKLFTWGW 64
+ WG G+ G LG G NE WV + G+LFT+G
Sbjct: 381 LYTWGKGDFGVLGHG-NEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGD 439
Query: 65 NQRGTLGHPPETKTENIPSQVKALSHVKIVQAAIGGWHCLAVDD------------QGRA 112
G LGH + K+ IP +V +L ++ V+AA G WH AV + G+
Sbjct: 440 GTFGVLGH-GDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 498
Query: 113 YAWGGNEYGQCG---EEPERKDDTGRPLRRDIVIPQRCAPKLV---VRQVAAGGTHSVVL 166
+ WG + G+ G +EP+ ++P C LV QVA G + +V L
Sbjct: 499 FTWGDGDKGRLGHGNKEPK-------------LVPT-CVAALVEPNFCQVACGHSLTVAL 544
Query: 167 TREGHVWTWGQPW------PPGDIKQISVPVRVQGLEN---VRLIAVGAFHNLALQEDGT 217
T GHV+T G P D K P RV+G + V IA GA+H L
Sbjct: 545 TTSGHVYTMGSPVYGQLGNSHADGK---TPNRVEGKLHKSFVEEIACGAYHVAVLTSRTE 601
Query: 218 LWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRG 276
++ WG G+LG GD R+ P V+ L + IA G + A+ ++ W G
Sbjct: 602 VYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAVC----IHRWASG 656
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 72/146 (49%), Gaps = 15/146 (10%)
Query: 240 PIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDSDKSSKMVPQRVQL 299
P ++ L + +IA GG H+ +T GE + WG GRLG G S+ P+ +
Sbjct: 299 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVD--SNIQQPKLIDA 356
Query: 300 LAGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKVTTGQPIEVPINIPPPQNL 359
L +I V+CG HS A+T G ++++G+GD G LG+G +V+ P V
Sbjct: 357 LNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRV---------- 406
Query: 360 SGNEADEGHWISKLVACGGRHTLAIV 385
N EG +S +ACG HT +
Sbjct: 407 --NFLLEGIHVSS-IACGPYHTAVVT 429
>AT5G60870.3 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:24485788-24487257 REVERSE
LENGTH=276
Length = 276
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 113/212 (53%), Gaps = 19/212 (8%)
Query: 153 VRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQ-------------ISVPVRVQGLE-N 198
+ +A GTH+ +T G ++ WG+ GD + +SVP +V+ L
Sbjct: 37 ISAIATSGTHTAAITESGELYMWGRE--EGDGRLGLGPGRGPNEGGGLSVPSKVKALTVP 94
Query: 199 VRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGG 258
V ++ G F +AL ++G LW WG N +LG GD +P+PV L G+ + IA GG
Sbjct: 95 VASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGG 154
Query: 259 WHSTALTDDGEVYGWGRGEHGRLGFGDSDKSSKMVPQRVQLLAGEDIVQVSCGGTHSVAL 318
+HS ALT++G+V WG G HG+L G S ++ VP ++ LA + IV ++ GG+ S A+
Sbjct: 155 YHSLALTEEGKVLSWGHGGHGQL--GSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAI 212
Query: 319 TRDGRMFSFGRGDHGRLGY-GRKVTTGQPIEV 349
T G ++ +G +LG G P+EV
Sbjct: 213 TDGGELWMWGNAKDFQLGVPGLPEIQTTPVEV 244
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 130/278 (46%), Gaps = 24/278 (8%)
Query: 58 KLFTWGWNQRGTLGHPPETKTENIPSQVKALSHVKIVQAAIGGWHCLAVDDQGRAYAWG- 116
L G+ G LGH T+ E +P +V KI A G H A+ + G Y WG
Sbjct: 3 SLVVRGYGGFGALGHKVYTR-ELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGR 61
Query: 117 --GNEYGQCGEEPERKDDTGRPLRRDIVIPQRCAPKLV-VRQVAAGGTHSVVLTREGHVW 173
G+ G + G + +P + V V V+ GG ++ LT+EG +W
Sbjct: 62 EEGDGRLGLGPGRGPNEGGG------LSVPSKVKALTVPVASVSCGGFFTMALTKEGQLW 115
Query: 174 TWGQ----PWPPGDIKQISVPVRVQGLENVRL--IAVGAFHNLALQEDGTLWAWGNNEYG 227
WG GD P+ V LE VR+ IA G +H+LAL E+G + +WG+ +G
Sbjct: 116 NWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHG 175
Query: 228 QLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDSD 287
QLG+ + + P ++ L+ +V IA+GG S A+TD GE++ WG + +LG
Sbjct: 176 QLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGV-PGL 234
Query: 288 KSSKMVPQRVQLLAGED------IVQVSCGGTHSVALT 319
+ P V L ED ++ +S G +H++ L
Sbjct: 235 PEIQTTPVEVNFLTEEDECQPHKVISISIGASHALCLV 272
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 83/179 (46%), Gaps = 30/179 (16%)
Query: 51 LAICDDGKLFTWGWNQRGTLGHPPETKTENI----PSQVKALSHVKIVQAAIGGWHCLAV 106
+A+ +G+L+ WG N LG + +N+ P V +L V+I Q A GG+H LA+
Sbjct: 106 MALTKEGQLWNWGANSNYELG-----RGDNLGGWEPMPVPSLEGVRITQIACGGYHSLAL 160
Query: 107 DDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCAPKLVVRQVAAGGTHSVVL 166
++G+ +WG +GQ G R + + A K +V +A+GG+ S +
Sbjct: 161 TEEGKVLSWGHGGHGQLGSSSLRNQKVPTEI-------EALADKKIVF-IASGGSSSAAI 212
Query: 167 TREGHVWTWG-----QPWPPGDIKQISVPVRVQGL--------ENVRLIAVGAFHNLAL 212
T G +W WG Q PG + + PV V L V I++GA H L L
Sbjct: 213 TDGGELWMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPHKVISISIGASHALCL 271
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 74/138 (53%), Gaps = 20/138 (14%)
Query: 254 IAAGGWHSTALTDDGEVYGWGRGE-----HGRLGFGDSDKSSKMVPQRVQLLAGEDIVQV 308
IA G H+ A+T+ GE+Y WGR E G G ++ VP +V+ L + V
Sbjct: 40 IATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALT-VPVASV 98
Query: 309 SCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKVTTGQPIEVPINIPPPQNLSGNEADEGH 368
SCGG ++ALT++G+++++G + LG G + +P+ VP + EG
Sbjct: 99 SCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVP-------------SLEGV 145
Query: 369 WISKLVACGGRHTLAIVE 386
I++ +ACGG H+LA+ E
Sbjct: 146 RITQ-IACGGYHSLALTE 162
>AT3G55580.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:20612766-20615730 FORWARD
LENGTH=488
Length = 488
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 165/424 (38%), Gaps = 107/424 (25%)
Query: 51 LAICDDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALSHVKIVQAAIGGWHCLAVDDQG 110
+A + GKL TWG + K P V + +A G HC+AV +
Sbjct: 77 MATAESGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPPEVCVQKAEAGWAHCVAVTENQ 136
Query: 111 RAYAWG-------GNEYGQC-GEEPERKDDT---------------------------GR 135
+ Y WG G +GQ G+ ER G
Sbjct: 137 QVYTWGWRECIPTGRVFGQVDGDSCERNISFSTEQVSSSSQGKKSSGGTSSQVEGRGGGE 196
Query: 136 PLRRDIVIPQR----------------------CAPKLVVRQVAAGGTHSVVLTREGHVW 173
P ++ + P + AP + + VAAGG H++ L+ G VW
Sbjct: 197 PTKKRRISPSKQAAENSSQSDNIDLSALPCLVSLAPGVRIVSVAAGGRHTLALSDIGQVW 256
Query: 174 TW-----GQPWPPGDIKQISVPVRVQGLE--------------------------NVRLI 202
W GQ ++ +S P + +E V+ I
Sbjct: 257 GWGYGGEGQLGLGSRVRLVSSPHPIPCIEPSSYGKATSSGVNMSSVVQCGRVLGSYVKKI 316
Query: 203 AVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHST 262
A G H+ + + G L +G YGQ G G T P V L G+ + ++AAG WH+T
Sbjct: 317 ACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTT 376
Query: 263 ALTDDGEVYGWGRGEHGRLGFGDSDKSSKMVPQRVQL--LAGEDIVQVSCGGTHSVALTR 320
+ DG+VY +G + G+LG G ++ +P+ ++ L ++ +SCG H+ +T
Sbjct: 377 CASSDGDVYAFGGNQFGQLGTGCDQ--AETLPKLLEAPNLENVNVKTISCGARHTAVITD 434
Query: 321 DGRMFSFGRGDHGRLGYGRKVTTGQPIEVPINIPPPQNLSGNEADEGHWISKLVACGGRH 380
+GR+F +G +G+LG G + P EV I P+N +ACG H
Sbjct: 435 EGRVFCWGWNKYGQLGIGDVIDRNAPAEVRIKDCFPKN---------------IACGWWH 479
Query: 381 TLAI 384
TL +
Sbjct: 480 TLLL 483
>AT5G11580.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:3718913-3721125 FORWARD
LENGTH=553
Length = 553
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 170/402 (42%), Gaps = 96/402 (23%)
Query: 51 LAICDDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALSH-----VKIVQAAIGGWHCLA 105
+A+ DG +++WG G LG E+ E +P V+ + ++IV A G +H LA
Sbjct: 29 IALTGDGCVYSWGRGMFGRLGTGKESD-ELVPVLVEFPNQAEGDRIRIVGVAAGAYHSLA 87
Query: 106 VDDQGRAYAWGGNEYGQCGEEPERK-------------------DDTGRPLRRDIVIPQR 146
V D G + WG N YGQ G + E +D+GR + D
Sbjct: 88 VSDDGSVWCWGYNIYGQLGFDGENSLAPCLIKNLFERETSSSSLNDSGREVGSD------ 141
Query: 147 CAPKLVVRQVAAGGTHSVVLTREGHVWTWG-------QPWPPGDIKQISVPVRVQGL--E 197
L V V AG S+ + G +W WG +P P I +P +
Sbjct: 142 ----LKVCTVKAGSMMSLAIDNVGGLWMWGNVPPQDSEPDPRLSFTSIPIPFPILDFHGR 197
Query: 198 NVRLIAVGAFHNLALQEDG-----------TLWAWGNNEYGQLGTGDTQPRSQPIPVQGL 246
V +A G H +AL G L++WGNN +GQLG GD + R++P V+
Sbjct: 198 TVLKVACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRARPQTVETF 257
Query: 247 ---SGLTLVDIAAGGWHSTALTDDGEV-------YGWGRGEHGRLGFGDSDKSSKMVPQR 296
SGLT+ DIA G H+ LT E + +G GE+G+LG S+KSS +
Sbjct: 258 NQKSGLTVYDIACGAHHTALLTYRKETPKGPSICWTFGFGENGQLGH-RSNKSSSLPEPV 316
Query: 297 VQLLAGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKVTTGQPIEVPINIPPP 356
L +V V CG H+ ++ +G ++S+G +E + + P
Sbjct: 317 SDLPEHAYLVSVDCGLFHTSVVSSEGYVWSWG------------------MERGLGLCPD 358
Query: 357 QNLSGNEADEGHWISKL------------VACGGRHTLAIVE 386
N + EA + K+ V+CG HT+ +V+
Sbjct: 359 VNFTEVEAGDDSVPRKISGGSSRFRDPVQVSCGAAHTVLVVD 400
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 149/386 (38%), Gaps = 57/386 (14%)
Query: 7 IIAWGSGEDGQLGIGNNEDKEWVCXXXXXXXXX-----XXXXXXXXXXXLAICDDGKLFT 61
+ +WG G G+LG G D+ LA+ DDG ++
Sbjct: 37 VYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEGDRIRIVGVAAGAYHSLAVSDDGSVWC 96
Query: 62 WGWNQRGTLGHPPETKTENIPSQVKAL------------------SHVKIVQAAIGGWHC 103
WG+N G LG E P +K L S +K+ G
Sbjct: 97 WGYNIYGQLGFDGENSLA--PCLIKNLFERETSSSSLNDSGREVGSDLKVCTVKAGSMMS 154
Query: 104 LAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDI-------VIPQRCAPKLVVRQV 156
LA+D+ G + WG N Q E R T P+ I V+ C + VV V
Sbjct: 155 LAIDNVGGLWMWG-NVPPQDSEPDPRLSFTSIPIPFPILDFHGRTVLKVACGDEHVVALV 213
Query: 157 AAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQGLE-----NVRLIAVGAF 207
G H +++WG GD + + P V+ V IA GA
Sbjct: 214 GPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRARPQTVETFNQKSGLTVYDIACGAH 273
Query: 208 HNLAL-------QEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGL-SGLTLVDIAAGGW 259
H L + W +G E GQLG + S P PV L LV + G +
Sbjct: 274 HTALLTYRKETPKGPSICWTFGFGENGQLGHRSNKSSSLPEPVSDLPEHAYLVSVDCGLF 333
Query: 260 HSTALTDDGEVYGWGR----GEHGRLGFGDSDKSSKMVPQRVQLLAGE--DIVQVSCGGT 313
H++ ++ +G V+ WG G + F + + VP+++ + D VQVSCG
Sbjct: 334 HTSVVSSEGYVWSWGMERGLGLCPDVNFTEVEAGDDSVPRKISGGSSRFRDPVQVSCGAA 393
Query: 314 HSVALTRDG-RMFSFGRGDHGRLGYG 338
H+V + G +++S+GRG +G LG G
Sbjct: 394 HTVLVVDGGYKLWSWGRGRNGVLGTG 419
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 133/299 (44%), Gaps = 66/299 (22%)
Query: 141 IVIPQRCAPKLVVRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQGL 196
++I + + K++ +AAG H++ LT +G V++WG+ G VPV V+
Sbjct: 8 LLISEDLSRKII--SLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFP 65
Query: 197 -----ENVRLI--AVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGL--- 246
+ +R++ A GA+H+LA+ +DG++W WG N YGQLG D + P ++ L
Sbjct: 66 NQAEGDRIRIVGVAAGAYHSLAVSDDGSVWCWGYNIYGQLGF-DGENSLAPCLIKNLFER 124
Query: 247 ---------------SGLTLVDIAAGGWHSTALTDDGEVYGWGR------GEHGRLGFGD 285
S L + + AG S A+ + G ++ WG RL F
Sbjct: 125 ETSSSSLNDSGREVGSDLKVCTVKAGSMMSLAIDNVGGLWMWGNVPPQDSEPDPRLSF-- 182
Query: 286 SDKSSKMVPQRVQLLAGEDIVQVSCGGTHSVALTRDGR-----------MFSFGRGDHGR 334
+S +P + G +++V+CG H VAL G ++S+G HG+
Sbjct: 183 ---TSIPIPFPILDFHGRTVLKVACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQ 239
Query: 335 LGYGRKVTTGQPIEVPINIPPPQNLSGNEADEGHWISKLVACGGRHTLAIVEWKVDEPQ 393
LG G + + PQ + G + +ACG HT A++ ++ + P+
Sbjct: 240 LGLGDGESRAR----------PQTVETFNQKSGLTVYD-IACGAHHT-ALLTYRKETPK 286
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 108/275 (39%), Gaps = 49/275 (17%)
Query: 51 LAICDDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALSH--VKIVQAAIGGWHCLAV-- 106
LAI + G L+ WG P +IP L +++ A G H +A+
Sbjct: 155 LAIDNVGGLWMWGNVPPQDSEPDPRLSFTSIPIPFPILDFHGRTVLKVACGDEHVVALVG 214
Query: 107 ---------DDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCAPKLVVRQVA 157
D Y+WG N +GQ G D R V L V +A
Sbjct: 215 PGDIHKDNSYDVSVLYSWGNNHHGQLG-----LGDGESRARPQTVETFNQKSGLTVYDIA 269
Query: 158 AGGTHSVVLTREGHV-------WTWGQPWPPGDI-----KQISVPVRVQGL-ENVRLIAV 204
G H+ +LT WT+G G + K S+P V L E+ L++V
Sbjct: 270 CGAHHTALLTYRKETPKGPSICWTFGFG-ENGQLGHRSNKSSSLPEPVSDLPEHAYLVSV 328
Query: 205 --GAFHNLALQEDGTLWAWG---------NNEYGQLGTGDTQPRSQPIPVQGLSGLTL-- 251
G FH + +G +W+WG + + ++ GD S P + G S
Sbjct: 329 DCGLFHTSVVSSEGYVWSWGMERGLGLCPDVNFTEVEAGDD---SVPRKISGGSSRFRDP 385
Query: 252 VDIAAGGWHSTALTDDG-EVYGWGRGEHGRLGFGD 285
V ++ G H+ + D G +++ WGRG +G LG G+
Sbjct: 386 VQVSCGAAHTVLVVDGGYKLWSWGRGRNGVLGTGN 420
>AT1G65920.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr1:24525267-24529204 REVERSE LENGTH=1006
Length = 1006
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 128/279 (45%), Gaps = 35/279 (12%)
Query: 82 PSQVKALSHVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDI 141
P +++ + + ++G H V QG + WG G+ G + DI
Sbjct: 283 PKLLESATMFDVQSISLGAKHAALVTRQGEVFCWGNGNSGK----------LGLKVNIDI 332
Query: 142 VIPQRCAP--KLVVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLENV 199
P+R + VR VA + +T G ++ WG G I+Q + + +V
Sbjct: 333 DHPKRVESLEDVAVRSVACSDHQTCAVTESGELYLWG--IDGGTIEQSGSQFLTRKISDV 390
Query: 200 R-------LIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLV 252
+A GA+H + G L+ +G+ +G LG G + ++P V+ L + ++
Sbjct: 391 LGGSLTVLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEVESLRRMKVI 450
Query: 253 DIAAGGWHSTALTDD------------GEVYGWGRGEHGRLGFGDSDKSSKMVPQRVQLL 300
++ G WH+ A+ + G+++ WG G+ GRLG DS + K+VP V L
Sbjct: 451 SVSCGPWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKR--KLVPTCVTEL 508
Query: 301 AGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRLGYGR 339
D ++VSCG T +VAL+ G +++ G HG+LG R
Sbjct: 509 IDHDFIKVSCGWTLTVALSISGTVYTMGSSIHGQLGCPR 547
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 152/354 (42%), Gaps = 52/354 (14%)
Query: 57 GKLFTWGWNQRGTLGHPPETKTENIPSQVKALSHVKIVQAAIGGWHCLAVDDQGRAYAWG 116
G++F WG G LG ++ P +V++L V + A AV + G Y WG
Sbjct: 311 GEVFCWGNGNSGKLGLKVNIDIDH-PKRVESLEDVAVRSVACSDHQTCAVTESGELYLWG 369
Query: 117 --GNEYGQCGEEPERKDDTGRPLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTREGHVWT 174
G Q G + L R I L V VA G H+ ++T G ++T
Sbjct: 370 IDGGTIEQSGSQF---------LTRKI--SDVLGGSLTVLSVACGAWHTAIVTSSGQLFT 418
Query: 175 WGQ----PWPPGDIKQISVPVRVQGLENVRLIAV--GAFHNLALQED------------G 216
+G G ++ ++ P V+ L +++I+V G +H A+ E G
Sbjct: 419 YGSGTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPWHTAAIVETANDRKFYNAKSCG 478
Query: 217 TLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRG 276
L+ WG+ + G+LG D++ + P V L + ++ G + AL+ G VY G
Sbjct: 479 KLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDFIKVSCGWTLTVALSISGTVYTMGSS 538
Query: 277 EHGRLGFGDS-DKSSKMVPQRVQLLAGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRL 335
HG+LG + DKS +V + L + + ++ G H LT G ++++G+G +G+L
Sbjct: 539 IHGQLGCPRAKDKSVNVV---LGNLTRQFVKDIASGSHHVAVLTSFGNVYTWGKGMNGQL 595
Query: 336 GYGRKVTTGQPIEV-PINIPPPQNLSGNEADEGHWISKLVACGGRHTLAIVEWK 388
G G P+ V P+ G + + +ACG T AI K
Sbjct: 596 GLGDVRDRNSPVLVEPL---------------GDRLVESIACGLNLTAAICLHK 634
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 133/323 (41%), Gaps = 16/323 (4%)
Query: 7 IIAWGSGEDGQLGIGNNEDKEWVCXXXXXXXXXXXXXXXXXXXXLAICDDGKLFTWGWNQ 66
+ WG+G G+LG+ N D + A+ + G+L+ WG +
Sbjct: 313 VFCWGNGNSGKLGLKVNIDIDHPKRVESLEDVAVRSVACSDHQTCAVTESGELYLWGIDG 372
Query: 67 RGTLGHPPETKTENIPSQVKALSHVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE- 125
GT+ S V S + ++ A G WH V G+ + +G +G G
Sbjct: 373 -GTIEQSGSQFLTRKISDVLGGS-LTVLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHG 430
Query: 126 --EPERKDDTGRPLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTRE-GHVWTWGQ----P 178
E K LRR VI C P V + G ++TWG
Sbjct: 431 SLESVTKPKEVESLRRMKVISVSCGPWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGR 490
Query: 179 WPPGDIKQISVPVRVQGLENVRLIAVGA--FHNLALQEDGTLWAWGNNEYGQLGTGDTQP 236
D K+ VP V L + I V +AL GT++ G++ +GQLG +
Sbjct: 491 LGHADSKRKLVPTCVTELIDHDFIKVSCGWTLTVALSISGTVYTMGSSIHGQLGCPRAKD 550
Query: 237 RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGD-SDKSSKMVPQ 295
+S + + L+ + DIA+G H LT G VY WG+G +G+LG GD D++S P
Sbjct: 551 KSVNVVLGNLTRQFVKDIASGSHHVAVLTSFGNVYTWGKGMNGQLGLGDVRDRNS---PV 607
Query: 296 RVQLLAGEDIVQVSCGGTHSVAL 318
V+ L + ++CG + A+
Sbjct: 608 LVEPLGDRLVESIACGLNLTAAI 630
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 97/198 (48%), Gaps = 23/198 (11%)
Query: 196 LENVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIA 255
+ +V+ I++GA H + G ++ WGN G+LG P V+ L + + +A
Sbjct: 291 MFDVQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNIDIDHPKRVESLEDVAVRSVA 350
Query: 256 AGGWHSTALTDDGEVYGWGRGEHGRLGFGDSDKS-SKMVPQRVQLLAG--EDIVQVSCGG 312
+ A+T+ GE+Y WG + G ++S S+ + +++ + G ++ V+CG
Sbjct: 351 CSDHQTCAVTESGELYLWG------IDGGTIEQSGSQFLTRKISDVLGGSLTVLSVACGA 404
Query: 313 THSVALTRDGRMFSFGRGDHGRLGYGRKVTTGQPIEVPINIPPPQNLSGNEADEGHWISK 372
H+ +T G++F++G G G LG+G + +P EV ++ + +S
Sbjct: 405 WHTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEVE-SLRRMKVIS------------ 451
Query: 373 LVACGGRHTLAIVEWKVD 390
V+CG HT AIVE D
Sbjct: 452 -VSCGPWHTAAIVETAND 468
>AT4G14368.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr4:8274279-8278810 REVERSE
LENGTH=1106
Length = 1106
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 134/288 (46%), Gaps = 55/288 (19%)
Query: 81 IPSQVKALSHVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRD 140
IP +++ + + Q A G H V QG + W E E G ++ D
Sbjct: 260 IPKPLESNVVLDVHQIACGVRHIALVTRQGEVFTW----------EEEAGGRLGHGIQVD 309
Query: 141 IVIPQRCAPKLV-------VRQVAAGGTHSVVLTREGHVWTWG---------------QP 178
+ C PKLV + VA G H+ ++ G ++TWG
Sbjct: 310 V-----CRPKLVEFLALTNIDFVACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSH 364
Query: 179 WPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRS 238
W P K++S P V+GL+ V +A G +H+ +G L+ +G+ +G LG GD + S
Sbjct: 365 WIP---KRVSGP--VEGLQ-VLSVACGTWHSALATANGKLFTFGDGAFGVLGHGDRESVS 418
Query: 239 QPIPVQGLSGLTLVDIAAGGWHSTAL----------TDDGEVYGWGRGEHGRLGFGDSDK 288
P V+ LSGL + +A G WH+ A+ T +++ WG G+ RLG G +K
Sbjct: 419 YPKEVKMLSGLKTLKVACGVWHTVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHG--NK 476
Query: 289 SSKMVPQRVQLLAGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRLG 336
+ ++P V L + Q++CG T +VALT G +F+ G HG+LG
Sbjct: 477 ETYLLPTCVSSLIDYNFNQIACGHTFTVALTTSGHVFTMGGTSHGQLG 524
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 142/301 (47%), Gaps = 40/301 (13%)
Query: 106 VDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCAPKLV--VRQVAAGGTHS 163
++ G Y WG E G P+ ++ ++ D++IP+ +V V Q+A G H
Sbjct: 226 IESLGDVYVWG--EVWSDGISPDGVVNST-TVKIDVLIPKPLESNVVLDVHQIACGVRHI 282
Query: 164 VVLTREGHVWTWGQPW--PPGDIKQISVP----VRVQGLENVRLIAVGAFHNLALQEDGT 217
++TR+G V+TW + G Q+ V V L N+ +A G +H A+ G
Sbjct: 283 ALVTRQGEVFTWEEEAGGRLGHGIQVDVCRPKLVEFLALTNIDFVACGEYHTCAVSTSGD 342
Query: 218 LWAWGN--NEYGQLGTGDTQPRSQPIPVQG-LSGLTLVDIAAGGWHSTALTDDGEVYGWG 274
L+ WG+ + G LG G P V G + GL ++ +A G WHS T +G+++ +G
Sbjct: 343 LFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTWHSALATANGKLFTFG 402
Query: 275 RGEHGRLGFGDSDKSSKMVPQRVQLLAGEDIVQVSCGGTHSVAL----------TRDGRM 324
G G LG GD + S P+ V++L+G ++V+CG H+VA+ T ++
Sbjct: 403 DGAFGVLGHGDRESVS--YPKEVKMLSGLKTLKVACGVWHTVAIVEVMNQTGTSTSSRKL 460
Query: 325 FSFGRGDHGRLGYGRKVTTGQPIEVPINIPPPQNLSGNEADEGHWISKLVACGGRHTLAI 384
F++G GD RLG+G K T P V I N +ACG T+A+
Sbjct: 461 FTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFN--------------QIACGHTFTVAL 506
Query: 385 V 385
Sbjct: 507 T 507
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 142/319 (44%), Gaps = 36/319 (11%)
Query: 53 ICDDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALSHVKIVQAAIGGWHCLAVDDQGRA 112
+ G++FTW G LGH + P V+ L+ I A G +H AV G
Sbjct: 285 VTRQGEVFTWEEEAGGRLGHGIQVDVCR-PKLVEFLALTNIDFVACGEYHTCAVSTSGDL 343
Query: 113 YAWGG--NEYGQCGEEPERKDDTGRPLRRDIVIPQRCA---PKLVVRQVAAGGTHSVVLT 167
+ WG + G G G L IP+R + L V VA G HS + T
Sbjct: 344 FTWGDGIHNVGLLGH--------GSDLSH--WIPKRVSGPVEGLQVLSVACGTWHSALAT 393
Query: 168 REGHVWTWGQ----PWPPGDIKQISVPVRVQGLENVRL--IAVGAFHNLALQE----DGT 217
G ++T+G GD + +S P V+ L ++ +A G +H +A+ E GT
Sbjct: 394 ANGKLFTFGDGAFGVLGHGDRESVSYPKEVKMLSGLKTLKVACGVWHTVAIVEVMNQTGT 453
Query: 218 ------LWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVY 271
L+ WG+ + +LG G+ + P V L IA G + ALT G V+
Sbjct: 454 STSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQIACGHTFTVALTTSGHVF 513
Query: 272 GWGRGEHGRLGFGDSDKSSKMVPQRVQ-LLAGEDIVQVSCGGTHSVALTRDGRMFSFGRG 330
G HG+LG +SD +P VQ L GE + ++SCG H LT +F++G+G
Sbjct: 514 TMGGTSHGQLGSSNSDGK---LPCLVQDRLVGEFVEEISCGDHHVAVLTSRSEVFTWGKG 570
Query: 331 DHGRLGYGRKVTTGQPIEV 349
+GRLG+G K P V
Sbjct: 571 SNGRLGHGDKDDRKTPTLV 589
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 109/231 (47%), Gaps = 28/231 (12%)
Query: 170 GHVWTWGQPW-----PPGDIKQISV--------PVRVQGLENVRLIAVGAFHNLALQEDG 216
G V+ WG+ W P G + +V P+ + +V IA G H + G
Sbjct: 230 GDVYVWGEVWSDGISPDGVVNSTTVKIDVLIPKPLESNVVLDVHQIACGVRHIALVTRQG 289
Query: 217 TLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRG 276
++ W G+LG G +P V+ L+ + +A G +H+ A++ G+++ WG G
Sbjct: 290 EVFTWEEEAGGRLGHGIQVDVCRPKLVEFLALTNIDFVACGEYHTCAVSTSGDLFTWGDG 349
Query: 277 EHGRLGFGDSDKSSKMVPQRVQ-LLAGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRL 335
H G S +P+RV + G ++ V+CG HS T +G++F+FG G G L
Sbjct: 350 IHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVL 409
Query: 336 GYGRKVTTGQPIEVPINIPPPQNLSGNEADEGHWISKLVACGGRHTLAIVE 386
G+G + + P EV + LSG + + VACG HT+AIVE
Sbjct: 410 GHGDRESVSYPKEVKM-------LSGLKTLK-------VACGVWHTVAIVE 446
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 122/288 (42%), Gaps = 34/288 (11%)
Query: 52 AICDDGKLFTWG--WNQRGTLGHPPETKTENIPSQVKA-LSHVKIVQAAIGGWHCLAVDD 108
A+ G LFTWG + G LGH + + IP +V + ++++ A G WH
Sbjct: 336 AVSTSGDLFTWGDGIHNVGLLGHGSDL-SHWIPKRVSGPVEGLQVLSVACGTWHSALATA 394
Query: 109 QGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQ--RCAPKLVVRQVAAGGTHSVVL 166
G+ + +G +G G R + P+ + L +VA G H+V +
Sbjct: 395 NGKLFTFGDGAFGVLGHGD----------RESVSYPKEVKMLSGLKTLKVACGVWHTVAI 444
Query: 167 ----------TREGHVWTWG----QPWPPGDIKQISVPVRVQGL--ENVRLIAVGAFHNL 210
T ++TWG G+ + +P V L N IA G +
Sbjct: 445 VEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQIACGHTFTV 504
Query: 211 ALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEV 270
AL G ++ G +GQLG+ ++ + + L G + +I+ G H LT EV
Sbjct: 505 ALTTSGHVFTMGGTSHGQLGSSNSDGKLPCLVQDRLVGEFVEEISCGDHHVAVLTSRSEV 564
Query: 271 YGWGRGEHGRLGFGDSDKSSKMVPQRVQLLAGEDIVQVSCGGTHSVAL 318
+ WG+G +GRLG GD D + P V+ L + +SCG + ++
Sbjct: 565 FTWGKGSNGRLGHGDKD--DRKTPTLVEALRERHVKSISCGSNFTSSI 610
>AT1G27060.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr1:9395023-9396673 FORWARD
LENGTH=386
Length = 386
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 148/356 (41%), Gaps = 34/356 (9%)
Query: 9 AWGSGEDGQLGIGNNEDKEWVCXXXXXXXXXXXXXXXXXXXXLAICDDGKLFTWGWNQRG 68
+WG+G DGQLG +D+ +A+ GK+FTWG G
Sbjct: 19 SWGAGTDGQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFTWGRGSSG 78
Query: 69 TLGHPPETKTENIPSQVKALSHVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPE 128
LGH + +P V I QAA G H V D G + G +GQ G
Sbjct: 79 QLGHG-DILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGH--- 134
Query: 129 RKDDTGRPLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTREGHVWTWGQP------WPPG 182
G L V+ VA G HS+VL V +G +
Sbjct: 135 -----GDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSD 189
Query: 183 DIKQISVPVRVQGLENVRLIAVGAF--HNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQP 240
IK +++P V GL++V ++ + A H+ A+ DG ++WG G G P+S P
Sbjct: 190 RIKSVNLPCVVSGLKDVEVVRISANGDHSAAISADGQFFSWGRGFCG--GPDVHAPQSLP 247
Query: 241 IPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRG-----EHGRLGFGDSDKSSKMVPQ 295
P L+ ++A G H+ LT DGEV+ G E +L S+ + VP
Sbjct: 248 SP------LSFREVAVGWNHALLLTVDGEVFKLGSTLNKQPEKQQLQIDSSEALFEKVPD 301
Query: 296 RVQLLAGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKVTTGQPIEVPI 351
G ++Q++ G HS A+T +G + ++G G+HG+LG G P V +
Sbjct: 302 ----FDGVKVMQIAAGAEHSAAVTENGEVKTWGWGEHGQLGLGNTNDQTSPELVSL 353
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 121/257 (47%), Gaps = 28/257 (10%)
Query: 111 RAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCAPKLV--VRQVAAGGTHSVVLTR 168
+ ++WG GQ G +D ++PQ + + + +A GG H + LT
Sbjct: 16 QVWSWGAGTDGQLGTTK----------LQDELLPQLLSLTSLPSISMLACGGAHVIALTS 65
Query: 169 EGHVWTWGQ----PWPPGDIKQISVPVRVQGLEN--VRLIAVGAFHNLALQEDGTLWAWG 222
G V+TWG+ GDI I++P V ++ + A G H+ + + G ++ G
Sbjct: 66 GGKVFTWGRGSSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCG 125
Query: 223 NNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLG 282
N +GQLG GDT S P V + ++ +A G HS L +V G+G G+ G+LG
Sbjct: 126 NGSFGQLGHGDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLG 185
Query: 283 FGDSDKSSKMVPQRVQLLAGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKVT 342
F S +P V L ++V++S G HS A++ DG+ FS+GRG G
Sbjct: 186 FSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAISADGQFFSWGRGFCG--------- 236
Query: 343 TGQPIEVPINIPPPQNL 359
G + P ++P P +
Sbjct: 237 -GPDVHAPQSLPSPLSF 252
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 83/168 (49%), Gaps = 16/168 (9%)
Query: 218 LWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGE 277
+W+WG GQLGT Q P + S ++ +A GG H ALT G+V+ WGRG
Sbjct: 17 VWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFTWGRGS 76
Query: 278 HGRLGFGDSDKSSKMVPQRVQLLAGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRLGY 337
G+LG GD + +P+ V I Q + G +HS ++ G +F+ G G G+LG+
Sbjct: 77 SGQLGHGDILNIT--LPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGH 134
Query: 338 GRKVTTGQPIEVPINIPPPQNLSGNEADEGHWISKLVACGGRHTLAIV 385
G ++ P +V + + + K+VACG RH+L +
Sbjct: 135 GDTLSLSTPAKV-------SHFNNDSV-------KMVACGMRHSLVLF 168
>AT1G69710.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr1:26222325-26226530 FORWARD LENGTH=1041
Length = 1041
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 150/309 (48%), Gaps = 40/309 (12%)
Query: 57 GKLFTWGWN-QRGTL---GHPPETKTEN--IPSQVKALSHVKIVQAAIGGWHCLAVDDQG 110
G +F WG + G L G+ + TE+ +P +++ + A G H + V QG
Sbjct: 260 GDVFVWGESISDGVLSGTGNSLNSTTEDALLPKALESTIVLDAQNIACGKCHAVLVTKQG 319
Query: 111 RAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTREG 170
++WG + G+ G E D +P + R L + +A G H+ +T+ G
Sbjct: 320 EIFSWGEGKGGKLGHGLE--TDAQKP---KFISSVR---GLGFKSLACGDFHTCAITQSG 371
Query: 171 HVWTWGQPWPPGDI------KQISVPVRV----QGLENVRLIAVGAFHNLALQEDGTLWA 220
+++WG D+ +P RV QGL V +A G +H + G L+
Sbjct: 372 DLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGL-YVSDVACGPWHTAVVASSGQLFT 430
Query: 221 WGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTD-------------D 267
+G+ +G LG GD + S P V+ L GL + +A G WH+ A+ +
Sbjct: 431 FGDGTFGALGHGDRRSTSVPREVESLIGLIVTKVACGVWHTAAVVEVTNEASEAEVDSSR 490
Query: 268 GEVYGWGRGEHGRLGFGDSDKSSKMVPQRVQLLAGEDIVQVSCGGTHSVALTRDGRMFSF 327
G+V+ WG GE G+LG GD+D +K++P+ V L E+I QV+CG + +V+ T G +++
Sbjct: 491 GQVFTWGDGEKGQLGHGDND--TKLLPECVISLTNENICQVACGHSLTVSRTSRGHVYTM 548
Query: 328 GRGDHGRLG 336
G +G+LG
Sbjct: 549 GSTAYGQLG 557
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 115/224 (51%), Gaps = 28/224 (12%)
Query: 140 DIVIPQRCAPKLVV--RQVAAGGTHSVVLTREGHVWTW-------GQPWPPGDIKQISVP 190
D ++P+ +V+ + +A G H+V++T++G +++W D ++
Sbjct: 287 DALLPKALESTIVLDAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLETDAQKPKFI 346
Query: 191 VRVQGLENVRLIAVGAFHNLALQEDGTLWAWGNNEYG--QLGTGDTQPRSQPIPVQG-LS 247
V+GL + +A G FH A+ + G L++WG+ + LG G+ P V G L
Sbjct: 347 SSVRGL-GFKSLACGDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQ 405
Query: 248 GLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDSDKSSKMVPQRVQLLAGEDIVQ 307
GL + D+A G WH+ + G+++ +G G G LG G D+ S VP+ V+ L G + +
Sbjct: 406 GLYVSDVACGPWHTAVVASSGQLFTFGDGTFGALGHG--DRRSTSVPREVESLIGLIVTK 463
Query: 308 VSCGGTHSVAL-------------TRDGRMFSFGRGDHGRLGYG 338
V+CG H+ A+ + G++F++G G+ G+LG+G
Sbjct: 464 VACGVWHTAAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHG 507
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 141/322 (43%), Gaps = 35/322 (10%)
Query: 51 LAICDDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALSHVKIVQAAIGGWHCLAVDDQG 110
+ + G++F+WG + G LGH ET + P + ++ + A G +H A+ G
Sbjct: 313 VLVTKQGEIFSWGEGKGGKLGHGLETDAQK-PKFISSVRGLGFKSLACGDFHTCAITQSG 371
Query: 111 RAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCAPKL---VVRQVAAGGTHSVVLT 167
Y+WG + D G IP+R L V VA G H+ V+
Sbjct: 372 DLYSWGDGTHNV--------DLLGHGNESSCWIPKRVTGDLQGLYVSDVACGPWHTAVVA 423
Query: 168 REGHVWTWGQ----PWPPGDIKQISVPVRVQGLEN--VRLIAVGAFHNLALQE------- 214
G ++T+G GD + SVP V+ L V +A G +H A+ E
Sbjct: 424 SSGQLFTFGDGTFGALGHGDRRSTSVPREVESLIGLIVTKVACGVWHTAAVVEVTNEASE 483
Query: 215 ------DGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDG 268
G ++ WG+ E GQLG GD + P V L+ + +A G + + T G
Sbjct: 484 AEVDSSRGQVFTWGDGEKGQLGHGDNDTKLLPECVISLTNENICQVACGHSLTVSRTSRG 543
Query: 269 EVYGWGRGEHGRLGFGDSDKSSKMVPQRVQ-LLAGEDIVQVSCGGTHSVALTRDGRMFSF 327
VY G +G+LG + + P+RV+ + + +++CG H LT ++++
Sbjct: 544 HVYTMGSTAYGQLG---NPTAKGNFPERVEGDIVEASVEEIACGSYHVAVLTSKSEIYTW 600
Query: 328 GRGDHGRLGYGRKVTTGQPIEV 349
G+G +G+LG+G +P V
Sbjct: 601 GKGLNGQLGHGNVENKREPAVV 622
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 103/198 (52%), Gaps = 17/198 (8%)
Query: 202 IAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHS 261
IA G H + + + G +++WG + G+LG G +P + + GL +A G +H+
Sbjct: 305 IACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLETDAQKPKFISSVRGLGFKSLACGDFHT 364
Query: 262 TALTDDGEVYGWGRGEHGRLGFGDSDKSSKMVPQRVQ-LLAGEDIVQVSCGGTHSVALTR 320
A+T G++Y WG G H G ++SS +P+RV L G + V+CG H+ +
Sbjct: 365 CAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACGPWHTAVVAS 424
Query: 321 DGRMFSFGRGDHGRLGYGRKVTTGQPIEVPINIPPPQNLSGNEADEGHWISKLVACGGRH 380
G++F+FG G G LG+G + +T P EV E+ G ++K VACG H
Sbjct: 425 SGQLFTFGDGTFGALGHGDRRSTSVPREV-------------ESLIGLIVTK-VACGVWH 470
Query: 381 TLAIVEW--KVDEPQVDS 396
T A+VE + E +VDS
Sbjct: 471 TAAVVEVTNEASEAEVDS 488
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 137/327 (41%), Gaps = 19/327 (5%)
Query: 7 IIAWGSGEDGQLGIGNNEDKEWVCXXXXXXXXXXXXXXXXXXXXLAICDDGKLFTW--GW 64
I +WG G+ G+LG G D + AI G L++W G
Sbjct: 321 IFSWGEGKGGKLGHGLETDAQKPKFISSVRGLGFKSLACGDFHTCAITQSGDLYSWGDGT 380
Query: 65 NQRGTLGHPPETKTENIPSQVKA-LSHVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQC 123
+ LGH E+ IP +V L + + A G WH V G+ + +G +G
Sbjct: 381 HNVDLLGHGNESSCW-IPKRVTGDLQGLYVSDVACGPWHTAVVASSGQLFTFGDGTFGAL 439
Query: 124 GEEPERKDDTGRPLRRDI-VIPQRCAPKL----VVRQVAAGGTHSVVLTREGHVWTWGQ- 177
G R R + I +I + A + V +V + + V + G V+TWG
Sbjct: 440 GHGDRRSTSVPREVESLIGLIVTKVACGVWHTAAVVEVTNEASEAEVDSSRGQVFTWGDG 499
Query: 178 ---PWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALQED--GTLWAWGNNEYGQLGTG 232
GD +P V L N + V H+L + G ++ G+ YGQLG
Sbjct: 500 EKGQLGHGDNDTKLLPECVISLTNENICQVACGHSLTVSRTSRGHVYTMGSTAYGQLG-N 558
Query: 233 DTQPRSQPIPVQG-LSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDSDKSSK 291
T + P V+G + ++ +IA G +H LT E+Y WG+G +G+LG G+ + +K
Sbjct: 559 PTAKGNFPERVEGDIVEASVEEIACGSYHVAVLTSKSEIYTWGKGLNGQLGHGNVE--NK 616
Query: 292 MVPQRVQLLAGEDIVQVSCGGTHSVAL 318
P V L + + ++CG + +
Sbjct: 617 REPAVVGFLREKQVKAITCGSNFTAVI 643
>AT3G15430.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:5209408-5211562 FORWARD
LENGTH=488
Length = 488
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 144/309 (46%), Gaps = 16/309 (5%)
Query: 53 ICDDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALSHVKIVQAAIGGWHCLAVDDQGRA 112
+ G++ T G N GH ++ P V+AL Q A G + + +G A
Sbjct: 178 VLQSGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFLSREGHA 237
Query: 113 YAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTREGHV 172
Y G N +GQ G D RP+ + + + P V Q+AAG ++ + +T++G V
Sbjct: 238 YTCGSNTHGQLGH----GDTLDRPVPKVVEFLKTIGP---VVQIAAGPSYVLAVTQDGSV 290
Query: 173 WTWGQ----PWPPGDIKQISVPVRVQGLE----NVRLIAVGAFHNLALQEDGTLWAWGNN 224
+++G G+ + P +Q + ++ ++ G H +AL +G ++ WG
Sbjct: 291 YSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKG 350
Query: 225 EYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFG 284
G LG GD + P + L+ V + A + L + G +YG+G G LGF
Sbjct: 351 YCGALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFP 410
Query: 285 DSDKSSKMV-PQRVQLLAGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKVTT 343
D S K++ P+ ++ L + QVS G H++ +T+ GR+F FG + +LG+
Sbjct: 411 DRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVTQRGRIFGFGDNERAQLGHDSLRGC 470
Query: 344 GQPIEVPIN 352
+P E+ ++
Sbjct: 471 LEPTEIFLH 479
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 20/191 (10%)
Query: 51 LAICDDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALSH--VKIVQAAIGGWHCLAVDD 108
LA+ DG ++++G LGH E + E P ++A + I++ + G H +A+D
Sbjct: 282 LAVTQDGSVYSFGSGSNFCLGH-GEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDS 340
Query: 109 QGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTR 168
GR Y WG G G E T + L V C + QV A + VL
Sbjct: 341 NGRVYTWGKGYCGALGHGDENDKITPQVL----VNLNNC----LAVQVCARKRKTFVLVE 392
Query: 169 EGHVWTWG------QPWPP-GDIKQISVPVRVQGLENVRL--IAVGAFHNLALQEDGTLW 219
G ++ +G +P G ++ P ++ L+ R+ ++ G +H + + + G ++
Sbjct: 393 GGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVTQRGRIF 452
Query: 220 AWGNNEYGQLG 230
+G+NE QLG
Sbjct: 453 GFGDNERAQLG 463
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 2/131 (1%)
Query: 1 MDSNSPIIAWGSGEDGQLGIGNNEDKEWVCXXXXXXXXXXXXXXXXXXXXLAICDDGKLF 60
+DSN + WG G G LG G+ DK + + G L+
Sbjct: 338 LDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLY 397
Query: 61 TWGWNQRGTLGHPPETKTENI--PSQVKALSHVKIVQAAIGGWHCLAVDDQGRAYAWGGN 118
+GW G+LG P ++ + P ++ L ++ Q + G +H + V +GR + +G N
Sbjct: 398 GFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVTQRGRIFGFGDN 457
Query: 119 EYGQCGEEPER 129
E Q G + R
Sbjct: 458 ERAQLGHDSLR 468
>AT3G15430.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:5209408-5211562 FORWARD
LENGTH=488
Length = 488
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 144/309 (46%), Gaps = 16/309 (5%)
Query: 53 ICDDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALSHVKIVQAAIGGWHCLAVDDQGRA 112
+ G++ T G N GH ++ P V+AL Q A G + + +G A
Sbjct: 178 VLQSGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFLSREGHA 237
Query: 113 YAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTREGHV 172
Y G N +GQ G D RP+ + + + P V Q+AAG ++ + +T++G V
Sbjct: 238 YTCGSNTHGQLGH----GDTLDRPVPKVVEFLKTIGP---VVQIAAGPSYVLAVTQDGSV 290
Query: 173 WTWGQ----PWPPGDIKQISVPVRVQGLE----NVRLIAVGAFHNLALQEDGTLWAWGNN 224
+++G G+ + P +Q + ++ ++ G H +AL +G ++ WG
Sbjct: 291 YSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKG 350
Query: 225 EYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFG 284
G LG GD + P + L+ V + A + L + G +YG+G G LGF
Sbjct: 351 YCGALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFP 410
Query: 285 DSDKSSKMV-PQRVQLLAGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKVTT 343
D S K++ P+ ++ L + QVS G H++ +T+ GR+F FG + +LG+
Sbjct: 411 DRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVTQRGRIFGFGDNERAQLGHDSLRGC 470
Query: 344 GQPIEVPIN 352
+P E+ ++
Sbjct: 471 LEPTEIFLH 479
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 20/191 (10%)
Query: 51 LAICDDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALSH--VKIVQAAIGGWHCLAVDD 108
LA+ DG ++++G LGH E + E P ++A + I++ + G H +A+D
Sbjct: 282 LAVTQDGSVYSFGSGSNFCLGH-GEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDS 340
Query: 109 QGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTR 168
GR Y WG G G E T + L V C + QV A + VL
Sbjct: 341 NGRVYTWGKGYCGALGHGDENDKITPQVL----VNLNNC----LAVQVCARKRKTFVLVE 392
Query: 169 EGHVWTWG------QPWPP-GDIKQISVPVRVQGLENVRL--IAVGAFHNLALQEDGTLW 219
G ++ +G +P G ++ P ++ L+ R+ ++ G +H + + + G ++
Sbjct: 393 GGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVTQRGRIF 452
Query: 220 AWGNNEYGQLG 230
+G+NE QLG
Sbjct: 453 GFGDNERAQLG 463
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 2/131 (1%)
Query: 1 MDSNSPIIAWGSGEDGQLGIGNNEDKEWVCXXXXXXXXXXXXXXXXXXXXLAICDDGKLF 60
+DSN + WG G G LG G+ DK + + G L+
Sbjct: 338 LDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLY 397
Query: 61 TWGWNQRGTLGHPPETKTENI--PSQVKALSHVKIVQAAIGGWHCLAVDDQGRAYAWGGN 118
+GW G+LG P ++ + P ++ L ++ Q + G +H + V +GR + +G N
Sbjct: 398 GFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVTQRGRIFGFGDN 457
Query: 119 EYGQCGEEPER 129
E Q G + R
Sbjct: 458 ERAQLGHDSLR 468
>AT3G53830.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:19940814-19943592 FORWARD
LENGTH=472
Length = 472
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 166/420 (39%), Gaps = 103/420 (24%)
Query: 51 LAICDDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALSHVKIVQAAIGGWHCLAVDDQG 110
+AI + GKL TWG + K P + +VQA+ G HC V + G
Sbjct: 65 MAISEKGKLITWGSTDDEGQSYVASGKHGETPEPFPLPTEAPVVQASSGWAHCAVVTETG 124
Query: 111 RAYAWG-------------------------------------GNEYGQCGEEPER---- 129
A+ WG NE + GEE +
Sbjct: 125 EAFTWGWKECIPSKDPVGKQQSGSSEQGDIASQGSNAASGTTLQNENQKVGEESVKRRRV 184
Query: 130 ---KDDT-GRPLRRDIV--IPQRCAPKLVVR--QVAAGGTHSVVLTREGHVWTWG----- 176
KD+T G D P + L VR VA GG H++ L+ G +W WG
Sbjct: 185 STAKDETEGHTSGGDFFATTPSLVSVGLGVRITSVATGGRHTLALSDLGQIWGWGYGGEG 244
Query: 177 QPWPPGDIKQISVPVRVQGLENV------------------------------RLIAVGA 206
Q IK +S P + LE++ + I+ G
Sbjct: 245 QLGLGSRIKMVSSPHLIPCLESIGSGKERSFILHQGGTTTTSAQASREPGQYIKAISCGG 304
Query: 207 FHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTD 266
H+ A+ + G L +G YGQ G G+T + +P+ V + + + +AAG WH+ ++
Sbjct: 305 RHSAAITDAGGLITFGWGLYGQCGHGNTNDQLRPMAVSEVKSVRMESVAAGLWHTICISS 364
Query: 267 DGEVYGWGRGEHGRLGFGDSDKSSKMVPQRV--QLLAGEDIVQVSCGGTHSVALTRDGRM 324
DG+VY +G + G+LG G ++++P+ + Q L G+ VSCG HS L DG++
Sbjct: 365 DGKVYAFGGNQFGQLGTGTDH--AEILPRLLDGQNLEGKHAKAVSCGARHSAVLAEDGQL 422
Query: 325 FSFGRGDHGRLGYGRKVTTGQPIEVPINIPPPQNLSGNEADEGHWISKLVACGGRHTLAI 384
+G +G+LG G NIP L G + VACG HTL +
Sbjct: 423 LCWGWNKYGQLGLGDTNDR--------NIPTQVQLDGCRL-------RKVACGWWHTLLL 467
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 80/174 (45%), Gaps = 18/174 (10%)
Query: 52 AICDDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALSHVKIVQAAIGGWHCLAVDDQGR 111
AI D G L T+GW G GH T + P V + V++ A G WH + + G+
Sbjct: 309 AITDAGGLITFGWGLYGQCGH-GNTNDQLRPMAVSEVKSVRMESVAAGLWHTICISSDGK 367
Query: 112 AYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTREGH 171
YA+GGN++GQ G + + R L + + + V+ G HS VL +G
Sbjct: 368 VYAFGGNQFGQLGTGTDHAEILPRLLDGQNLEGKH------AKAVSCGARHSAVLAEDGQ 421
Query: 172 VWTWGQPWPP------GDIKQISVPVRVQGLENVRL--IAVGAFHNLALQEDGT 217
+ WG W GD ++P +VQ L+ RL +A G +H L L + T
Sbjct: 422 LLCWG--WNKYGQLGLGDTNDRNIPTQVQ-LDGCRLRKVACGWWHTLLLGDSPT 472
>AT1G76950.1 | Symbols: PRAF1 | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr1:28906952-28911325 FORWARD LENGTH=1103
Length = 1103
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 157/364 (43%), Gaps = 59/364 (16%)
Query: 53 ICDDGKLFTWGWNQRGTLGHP--PETKTENIPSQVKALSHVKIVQAAIGGWHCLAVDDQG 110
+ G++FTWG G LGH + + + A S V V A G +H AV G
Sbjct: 296 VTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFV--ACGEFHTCAVTLAG 353
Query: 111 RAYAWGGNEY--GQCGEEPERKDDTGRPLRRDIV--IPQRCAPKLV---VRQVAAGGTHS 163
Y WG + G G DI IP+R A L V V+ G H+
Sbjct: 354 ELYTWGDGTHNVGLLGHGS------------DISHWIPKRIAGSLEGLHVASVSCGPWHT 401
Query: 164 VVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQGLENVRLIAV--GAFHNLALQE--- 214
++T G ++T+G GD + + P V+ L +R IAV G +H A+ E
Sbjct: 402 ALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIV 461
Query: 215 ---------DGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALT 265
G L+ WG+ + +LG GD PR +P V L IA G + LT
Sbjct: 462 TQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVGLT 521
Query: 266 DDGEVYGWGRGEHGRLGFGDSD-KSSKMVPQRVQLLAGEDIVQVSCGGTHSVALTRDGRM 324
G+V+ G +G+LG +D K +V + LA E + ++SCG H ALT +
Sbjct: 522 TSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDK---LASEFVEEISCGAYHVAALTSRNEV 578
Query: 325 FSFGRGDHGRLGYGRKVTTGQPIEVPINIPPPQNLSGNEADEGHWISKLVACGGRHTLAI 384
+++G+G +GRLG+G P V EA + + K +ACG +T AI
Sbjct: 579 YTWGKGANGRLGHGDLEDRKVPTIV-------------EALKDRHV-KYIACGSNYTAAI 624
Query: 385 VEWK 388
K
Sbjct: 625 CLHK 628
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 127/271 (46%), Gaps = 26/271 (9%)
Query: 107 DDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCAPKLV--VRQVAAGGTHSV 164
D G Y WG + K+ + R D+++P+ +V V Q+A G H+
Sbjct: 235 DALGDVYIWGEVICDNVVKVGIDKNASYLTTRTDVLVPKPLESNIVLDVHQIACGVRHAA 294
Query: 165 VLTREGHVWTWGQP----WPPGDIKQISVPVRVQGL---ENVRLIAVGAFHNLALQEDGT 217
+TR+G ++TWG+ G K + P V+ L +V +A G FH A+ G
Sbjct: 295 FVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEFHTCAVTLAGE 354
Query: 218 LWAWGNNEY--GQLGTGDTQPRSQPIPVQG-LSGLTLVDIAAGGWHSTALTDDGEVYGWG 274
L+ WG+ + G LG G P + G L GL + ++ G WH+ +T G ++ +G
Sbjct: 355 LYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHTALITSYGRLFTFG 414
Query: 275 RGEHGRLGFGDSDKSSKMVPQRVQLLAGEDIVQVSCGGTHSVALTR------------DG 322
G G LG G DK + P+ V+ L+G + VSCG H+ A+ G
Sbjct: 415 DGTFGVLGHG--DKETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSG 472
Query: 323 RMFSFGRGDHGRLGYGRKVTTGQPIEVPINI 353
++F++G GD RLG+G K +P VP I
Sbjct: 473 KLFTWGDGDKNRLGHGDKDPRLKPTCVPALI 503
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 130/281 (46%), Gaps = 38/281 (13%)
Query: 81 IPSQVKALSHVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRD 140
+P +++ + + Q A G H V QG + WG G+ G + +D
Sbjct: 271 VPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGH----------GIGKD 320
Query: 141 IVIPQRCAPKLV----VRQVAAGGTHSVVLTREGHVWTWGQPWPP----GDIKQIS--VP 190
+ P R L V VA G H+ +T G ++TWG G IS +P
Sbjct: 321 VFHP-RLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIP 379
Query: 191 VRVQG-LE--NVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLS 247
R+ G LE +V ++ G +H + G L+ +G+ +G LG GD + P V+ LS
Sbjct: 380 KRIAGSLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLS 439
Query: 248 GLTLVDIAAGGWHSTALTD------------DGEVYGWGRGEHGRLGFGDSDKSSKMVPQ 295
GL + ++ G WH+ A+ + G+++ WG G+ RLG GD D ++ P
Sbjct: 440 GLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKD--PRLKPT 497
Query: 296 RVQLLAGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRLG 336
V L + +++CG + +V LT G++F+ G +G+LG
Sbjct: 498 CVPALIDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLG 538
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 100/204 (49%), Gaps = 16/204 (7%)
Query: 190 PVRVQGLENVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGL 249
P+ + +V IA G H + G ++ WG G+LG G + P V+ L+
Sbjct: 274 PLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTAT 333
Query: 250 TLVD-IAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDSDKSSKMVPQRVQ-LLAGEDIVQ 307
+ VD +A G +H+ A+T GE+Y WG G H G S +P+R+ L G +
Sbjct: 334 SSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVAS 393
Query: 308 VSCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKVTTGQPIEVPINIPPPQNLSGNEADEG 367
VSCG H+ +T GR+F+FG G G LG+G K T P EV ++LSG
Sbjct: 394 VSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREV-------ESLSG------ 440
Query: 368 HWISKLVACGGRHTLAIVEWKVDE 391
+ V+CG HT A+VE V +
Sbjct: 441 -LRTIAVSCGVWHTAAVVEIIVTQ 463
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 18/151 (11%)
Query: 240 PIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDSDKSSKMVPQRVQ- 298
P P++ L + IA G H+ +T GE++ WG GRLG G P+ V+
Sbjct: 272 PKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDV--FHPRLVES 329
Query: 299 LLAGEDIVQVSCGGTHSVALTRDGRMFSFGRGDH--GRLGYGRKVTTGQPIEVPINIPPP 356
L A + V+CG H+ A+T G ++++G G H G LG+G ++ P + ++
Sbjct: 330 LTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSL--- 386
Query: 357 QNLSGNEADEGHWISKLVACGGRHTLAIVEW 387
EG ++ V+CG HT I +
Sbjct: 387 ---------EGLHVAS-VSCGPWHTALITSY 407
>AT5G42140.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr5:16837547-16841640 REVERSE LENGTH=1073
Length = 1073
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 157/361 (43%), Gaps = 55/361 (15%)
Query: 53 ICDDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALSHVKIVQAAIGGWHCLAVDDQGRA 112
+ G++FTWG G LGH K P +++L+ I A G +H AV G
Sbjct: 287 VSRQGEVFTWGEASGGRLGHG-MGKDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGEI 345
Query: 113 YAWGGNEY--GQCGEEPERKDDTGRPLRRDIV--IPQRCA---PKLVVRQVAAGGTHSVV 165
Y WG + G G D+ IP+R + L + V+ G H+ +
Sbjct: 346 YTWGDGTHNAGLLGHGT------------DVSHWIPKRISGPLEGLQIASVSCGPWHTAL 393
Query: 166 LTREGHVWTWGQ----PWPPGDIKQISVPVRVQGLENVRLIAV--GAFHNLALQE----- 214
+T G ++T+G GD + + P V+ L +R IAV G +H A+ E
Sbjct: 394 ITSTGQLFTFGDGTFGVLGHGDKETVFYPREVESLSGLRTIAVACGVWHAAAIVEVIVTH 453
Query: 215 ------DGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDG 268
G L+ WG+ + +LG GD +PR +P V L T +A G + LT G
Sbjct: 454 SSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHTFHRVACGHSLTVGLTTSG 513
Query: 269 EVYGWGRGEHGRLGFGDSDKSSKMVPQRVQLLAGEDIVQ-VSCGGTHSVALTRDGRMFSF 327
+VY G +G+LG ++D +P V+ +D V+ ++CG H LT +F++
Sbjct: 514 KVYTMGSTVYGQLGNPNADGK---LPCLVEDKLTKDCVEEIACGAYHVAVLTSRNEVFTW 570
Query: 328 GRGDHGRLGYGRKVTTGQPIEVPINIPPPQNLSGNEADEGHWISKLVACGGRHTLAIVEW 387
G+G +GRLG+G P V + E H K +ACG T AI
Sbjct: 571 GKGANGRLGHGDVEDRKAPTLV------------DALKERHV--KNIACGSNFTAAICLH 616
Query: 388 K 388
K
Sbjct: 617 K 617
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 128/282 (45%), Gaps = 42/282 (14%)
Query: 81 IPSQVKALSHVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRD 140
IP +++ + + A G H V QG + WG G+ G KD TG L
Sbjct: 262 IPKPLESNVVLDVHHIACGVKHAALVSRQGEVFTWGEASGGRLGH-GMGKDVTGPQLIES 320
Query: 141 IVIPQRCAPKLVVRQVAAGGTHSVVLTREGHVWTWG---------------QPWPPGDIK 185
+ + VA G H+ +T G ++TWG W P K
Sbjct: 321 LAATS-------IDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIP---K 370
Query: 186 QISVPVRVQGLENVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQG 245
+IS P+ +GL+ + ++ G +H + G L+ +G+ +G LG GD + P V+
Sbjct: 371 RISGPL--EGLQ-IASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVES 427
Query: 246 LSGLTLVDIAAGGWHSTALTD-----------DGEVYGWGRGEHGRLGFGDSDKSSKMVP 294
LSGL + +A G WH+ A+ + G+++ WG G+ RLG GD K ++ P
Sbjct: 428 LSGLRTIAVACGVWHAAAIVEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGD--KEPRLKP 485
Query: 295 QRVQLLAGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRLG 336
V L +V+CG + +V LT G++++ G +G+LG
Sbjct: 486 TCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQLG 527
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 98/201 (48%), Gaps = 15/201 (7%)
Query: 187 ISVPVRVQGLENVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGL 246
I P+ + +V IA G H + G ++ WG G+LG G + + P ++ L
Sbjct: 262 IPKPLESNVVLDVHHIACGVKHAALVSRQGEVFTWGEASGGRLGHGMGKDVTGPQLIESL 321
Query: 247 SGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDSDKSSKMVPQRVQ-LLAGEDI 305
+ ++ +A G +H+ A+T GE+Y WG G H G S +P+R+ L G I
Sbjct: 322 AATSIDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQI 381
Query: 306 VQVSCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKVTTGQPIEVPINIPPPQNLSGNEAD 365
VSCG H+ +T G++F+FG G G LG+G K T P EV ++LSG
Sbjct: 382 ASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREV-------ESLSG---- 430
Query: 366 EGHWISKLVACGGRHTLAIVE 386
+ VACG H AIVE
Sbjct: 431 ---LRTIAVACGVWHAAAIVE 448
>AT3G23270.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr3:8316436-8320337 FORWARD LENGTH=1045
Length = 1045
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 113/236 (47%), Gaps = 29/236 (12%)
Query: 133 TGRPLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTREGHVWTWGQP----WPPGDIKQIS 188
T RPL ++V L V Q+ G H ++TR+G V+TWG+ G IS
Sbjct: 241 TPRPLESNVV--------LDVHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDIS 292
Query: 189 VP--VRVQGLENVRLIAVGAFHNLALQEDGTLWAWGN--NEYGQLGTGDTQPRSQPIPVQ 244
P V L N+ +A G +H + G L++WG+ + G LG G P V
Sbjct: 293 RPKLVEFLALTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVS 352
Query: 245 G-LSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDSDKSSKMVPQRVQLLAGE 303
G L GL ++ +A G WHS T +G+++ +G G G LG G+ + S P+ VQ L G
Sbjct: 353 GPLEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGNRESVS--YPKEVQSLNGL 410
Query: 304 DIVQVSCGGTHSVALTR----------DGRMFSFGRGDHGRLGYGRKVTTGQPIEV 349
V+V+C H+ A+ ++F++G GD RLG+G K T P V
Sbjct: 411 KTVKVACSIWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCV 466
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 135/310 (43%), Gaps = 40/310 (12%)
Query: 53 ICDDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALSHVKIVQAAIGGWHCLAVDDQGRA 112
+ G++FTWG G LGH + P V+ L+ I A G +H V G
Sbjct: 266 VTRQGEVFTWGEEVGGRLGHGIQVDISR-PKLVEFLALTNIDFVACGEYHTCVVSTSGDL 324
Query: 113 YAWGG--NEYGQCGEEPERKDDTGRPLRRDIV--IPQRCA---PKLVVRQVAAGGTHSVV 165
++WG + G G DI IP+R + L V VA G HS +
Sbjct: 325 FSWGDGIHNVGLLGHGS------------DISHWIPKRVSGPLEGLQVLSVACGTWHSAL 372
Query: 166 LTREGHVWTWGQ----PWPPGDIKQISVPVRVQGLENVRLIAVGA--FHNLALQE----- 214
T G ++T+G G+ + +S P VQ L ++ + V +H A+ E
Sbjct: 373 ATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQT 432
Query: 215 -----DGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGE 269
L+ WG+ + +LG G+ + P V L IA G + ALT G
Sbjct: 433 ATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGH 492
Query: 270 VYGWGRGEHGRLGFGDSDKSSKMVPQRVQ-LLAGEDIVQVSCGGTHSVALTRDGRMFSFG 328
V+ G HG+LG SD +P VQ L GE + +++CG H LT +F++G
Sbjct: 493 VFTMGGTAHGQLGNSISDGK---LPCLVQDRLVGEFVEEIACGAHHVAVLTSRSEVFTWG 549
Query: 329 RGDHGRLGYG 338
+G +GRLG+G
Sbjct: 550 KGANGRLGHG 559
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 127/265 (47%), Gaps = 29/265 (10%)
Query: 91 VKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCAPK 150
+ + Q G H V QG + WG G+ G + D RP + +
Sbjct: 251 LDVHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQV--DISRPKLVEFLALTN---- 304
Query: 151 LVVRQVAAGGTHSVVLTREGHVWTWGQPWPP----GDIKQIS--VPVRVQG-LENVRLIA 203
+ VA G H+ V++ G +++WG G IS +P RV G LE +++++
Sbjct: 305 --IDFVACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLS 362
Query: 204 V--GAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHS 261
V G +H+ +G L+ +G+ +G LG G+ + S P VQ L+GL V +A WH+
Sbjct: 363 VACGTWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVACSIWHT 422
Query: 262 TALTD----------DGEVYGWGRGEHGRLGFGDSDKSSKMVPQRVQLLAGEDIVQVSCG 311
A+ + +++ WG G+ RLG G +K + ++P V L + +++CG
Sbjct: 423 AAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHG--NKETYLLPTCVSSLIDYNFHKIACG 480
Query: 312 GTHSVALTRDGRMFSFGRGDHGRLG 336
T +VALT G +F+ G HG+LG
Sbjct: 481 HTFTVALTTSGHVFTMGGTAHGQLG 505
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 107/231 (46%), Gaps = 28/231 (12%)
Query: 170 GHVWTWGQPW-----PPGDIKQISV--------PVRVQGLENVRLIAVGAFHNLALQEDG 216
G V+ WG+ W P G +V P+ + +V I G H + G
Sbjct: 211 GDVYVWGEVWTEGILPDGTASNETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTRQG 270
Query: 217 TLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRG 276
++ WG G+LG G S+P V+ L+ + +A G +H+ ++ G+++ WG G
Sbjct: 271 EVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDFVACGEYHTCVVSTSGDLFSWGDG 330
Query: 277 EHGRLGFGDSDKSSKMVPQRVQ-LLAGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRL 335
H G S +P+RV L G ++ V+CG HS T +G++F+FG G G L
Sbjct: 331 IHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVL 390
Query: 336 GYGRKVTTGQPIEVPINIPPPQNLSGNEADEGHWISKLVACGGRHTLAIVE 386
G+G + + P EV Q+L+G + + VAC HT AIVE
Sbjct: 391 GHGNRESVSYPKEV-------QSLNGLKTVK-------VACSIWHTAAIVE 427
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 125/304 (41%), Gaps = 20/304 (6%)
Query: 53 ICDDGKLFTWG--WNQRGTLGHPPETKTENIPSQVKA-LSHVKIVQAAIGGWHCLAVDDQ 109
+ G LF+WG + G LGH + + IP +V L ++++ A G WH
Sbjct: 318 VSTSGDLFSWGDGIHNVGLLGHGSDI-SHWIPKRVSGPLEGLQVLSVACGTWHSALATAN 376
Query: 110 GRAYAWGGNEYGQCG---EEPERKDDTGRPLRRDIVIPQRCAPKLVVRQVAAGGTHSVVL 166
G+ + +G +G G E + L + C+ V G + +
Sbjct: 377 GKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTATSM 436
Query: 167 TREGHVWTWG----QPWPPGDIKQISVPVRVQGL--ENVRLIAVGAFHNLALQEDGTLWA 220
+ ++TWG G+ + +P V L N IA G +AL G ++
Sbjct: 437 SSR-KLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFT 495
Query: 221 WGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGR 280
G +GQLG + + + L G + +IA G H LT EV+ WG+G +GR
Sbjct: 496 MGGTAHGQLGNSISDGKLPCLVQDRLVGEFVEEIACGAHHVAVLTSRSEVFTWGKGANGR 555
Query: 281 LGFGDSDKSSKMVPQRVQLLAGEDIVQVSCGG--THSVALTR--DGRMFSFGRGDHGRLG 336
LG GD++ K P V+ L + +SCG T S+ + + G S G G
Sbjct: 556 LGHGDTE--DKRTPTLVEALRDRHVKSLSCGSNFTSSICIHKWVSGADQSICSGCRQAFG 613
Query: 337 YGRK 340
+ RK
Sbjct: 614 FTRK 617
>AT5G08710.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:2834858-2837866 REVERSE
LENGTH=434
Length = 434
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 172/410 (41%), Gaps = 64/410 (15%)
Query: 10 WGSGEDGQLGIGNNEDKEW---VCXXXXXXXXXXXXXXXXXXXXLAICDDGKLFTWGWNQ 66
WGSG+ G+LG+G N D +W VC L + + ++F G N
Sbjct: 54 WGSGDYGRLGLG-NLDSQWTPAVC--SALSDHSITAVACGGAHTLFLTETRRVFATGLND 110
Query: 67 RGTLGHPPETKTENIPSQVKALSHVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE 126
G LG P +V L I+ + G +H A+ G Y WG N GQ G
Sbjct: 111 CGQLGVSDVKSHAMDPLEVSGLDK-DILHISAGYYHSAAITVDGELYMWGKNSSGQLG-- 167
Query: 127 PERKDDTGRPLRRDIVIPQRCAPK--LVVRQVAAGGTHSVVLTREGHV-----------W 173
G+ R + +P + + ++ VA G HSV +T G V
Sbjct: 168 ------LGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTDGGEVLSWGGGGSGRLG 221
Query: 174 TWGQPWPPGDIKQIS--VPVRVQGLENVRL--IAVGAFHNLALQEDGTLWAWGNNEYGQL 229
Q G ++ S P ++ LE +++ +A G H+ E+G+ + +G ++
Sbjct: 222 HGHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACTDENGSAFMFGEKSINKM 281
Query: 230 GTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDSDKS 289
G G + + P + + ++A GG+H+ +T GE+Y WG E+G LG + S
Sbjct: 282 GFGGVRNATTPSIISEVP--YAEEVACGGYHTCVVTRGGELYTWGSNENGCLGTDSTYVS 339
Query: 290 SKMVPQRVQLLAGEDIV-QVSCGGTHSVALTRDGRMFSFG-RGDH-----------GRLG 336
P RV+ E V QVSCG H+ A++ D +F++G G H G+LG
Sbjct: 340 HS--PVRVEGPFLESTVSQVSCGWKHTAAIS-DNNVFTWGWGGSHGTFSVDGHSSGGQLG 396
Query: 337 YGRKVTTGQPIEVPINIPPPQNLSGNEADEGHWISKLVACGGRHTLAIVE 386
+G V +P V + G H ++CG HT A++E
Sbjct: 397 HGSDVDYARPAMVDL---------GKNVRAVH-----ISCGFNHTAAVLE 432
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 159/363 (43%), Gaps = 63/363 (17%)
Query: 55 DDGKLFT--WGWNQRGTLGHPPETKTENIPSQVKALSHVKIVQAAIGGWHCLAVDDQGRA 112
+ GK F WG G LG ++ P+ ALS I A GG H L + + R
Sbjct: 45 ESGKRFAAMWGSGDYGRLG-LGNLDSQWTPAVCSALSDHSITAVACGGAHTLFLTETRRV 103
Query: 113 YAWGGNEYGQCGEEPERKDDTGRPLR-----RDIVIPQRCAPKLVVRQVAAGGTHSVVLT 167
+A G N+ GQ G + K PL +DI+ ++AG HS +T
Sbjct: 104 FATGLNDCGQLGVS-DVKSHAMDPLEVSGLDKDIL------------HISAGYYHSAAIT 150
Query: 168 REGHVWTWGQPWPPGDI-------KQISVPVRVQGLENVRL--IAVGAFHNLALQEDGTL 218
+G ++ WG+ G + + + VP +V+ L + + +A+G+ H++A+ + G +
Sbjct: 151 VDGELYMWGKN-SSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTDGGEV 209
Query: 219 WAWGNN---------EYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGE 269
+WG + G + P ++ L G+ + ++AAG HS ++G
Sbjct: 210 LSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACTDENGS 269
Query: 270 VYGWGRGEHGRLGFGDSDKSSKMVPQRVQLLAGEDIVQVSCGGTHSVALTRDGRMFSFGR 329
+ +G ++GFG ++ P + + + +V+CGG H+ +TR G ++++G
Sbjct: 270 AFMFGEKSINKMGFGGVRNAT--TPSIISEVPYAE--EVACGGYHTCVVTRGGELYTWGS 325
Query: 330 GDHGRLGYGRKVTTGQPIEVPINIPPPQNLSGNEADEGHWISKL---VACGGRHTLAIVE 386
++G LG + P+ V EG ++ V+CG +HT AI +
Sbjct: 326 NENGCLGTDSTYVSHSPVRV----------------EGPFLESTVSQVSCGWKHTAAISD 369
Query: 387 WKV 389
V
Sbjct: 370 NNV 372
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 107/214 (50%), Gaps = 25/214 (11%)
Query: 184 IKQISVPV-RVQG-------LENVRLIAVGAFHNL-ALQEDGTLWA--WGNNEYGQLGTG 232
I ++ +PV R+QG L++ +L +G + E G +A WG+ +YG+LG G
Sbjct: 6 IGRVRIPVSRIQGSNCTSGLLKDSKLGPIGVCCSRWVSSESGKRFAAMWGSGDYGRLGLG 65
Query: 233 DTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDSDKSSKM 292
+ + P LS ++ +A GG H+ LT+ V+ G + G+LG D KS M
Sbjct: 66 NLDSQWTPAVCSALSDHSITAVACGGAHTLFLTETRRVFATGLNDCGQLGVSDV-KSHAM 124
Query: 293 VPQRVQLLAGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKVTTGQPIEVPIN 352
P V L +DI+ +S G HS A+T DG ++ +G+ G+LG G+K + + VP
Sbjct: 125 DPLEVSGL-DKDILHISAGYYHSAAITVDGELYMWGKNSSGQLGLGKKA--ARVVRVPTK 181
Query: 353 IPPPQNLSGNEADEGHWISKLVACGGRHTLAIVE 386
+ EA G I VA G H++A+ +
Sbjct: 182 V---------EALHGITIQS-VALGSEHSVAVTD 205
>AT5G48330.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:19585989-19587729 FORWARD
LENGTH=454
Length = 454
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 10/166 (6%)
Query: 190 PVRVQGL-ENVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLG---TGDTQPRSQPIPVQG 245
P V L ++ I+ G +H+LA+ G +WAWG N+ GQLG RS+P V+G
Sbjct: 74 PTVVSNLPSDISSISAGHYHSLAVTSSGEIWAWGRNDEGQLGRIVIDSRDSRSEPKRVEG 133
Query: 246 LSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDSDKSSKMVPQRVQLLAGEDI 305
L + + A G S A+ DDG ++ WGR + G+LG G+ ++ VP RV+ LA E +
Sbjct: 134 LENVNVQAAFASGVVSAAIGDDGSLWVWGRSKRGQLGLGNGIIEAR-VPSRVENLAAEHV 192
Query: 306 VQVSCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKVTTGQPIEVPI 351
V+VS G H++ALT DG++F +G GR+G G P+E +
Sbjct: 193 VKVSLGWGHALALTVDGKVFGWGYVADGRVG-----NVGLPLEASL 233
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 154/368 (41%), Gaps = 56/368 (15%)
Query: 1 MDSNSPIIAWGSGEDGQLG---IGNNEDKEWVCXXXXXXXXXXXXXXXXXXXXLAICDDG 57
+ S+ I AWG ++GQLG I + + + AI DDG
Sbjct: 97 VTSSGEIWAWGRNDEGQLGRIVIDSRDSRSEPKRVEGLENVNVQAAFASGVVSAAIGDDG 156
Query: 58 KLFTWGWNQRGTLGHPPETKTENIPSQVKALSHVKIVQAAIGGWHCLAVDDQGRAYAWGG 117
L+ WG ++RG LG +PS+V+ L+ +V+ ++G H LA+ G+ + WG
Sbjct: 157 SLWVWGRSKRGQLGLGNGIIEARVPSRVENLAAEHVVKVSLGWGHALALTVDGKVFGWGY 216
Query: 118 NEYGQCGEEPERKDDTGRPLRRDIV----------------IPQRCAPKLVVRQVAAGGT 161
G+ G + G PL ++ + A K VV ++
Sbjct: 217 VADGRVG-------NVGLPLEASLLDSITDGSMKGHHAAGDLNLEAAEKKVVEAMSKEND 269
Query: 162 HSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALQEDGTLWAW 221
+ W P +++ E V IA G+ H+L L DGTL +
Sbjct: 270 MPIA-------------WEPCLVEETCN-------EKVADIACGSDHSLILCHDGTLLSA 309
Query: 222 GNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGE--VYGWGRGEHG 279
G+N YGQLG +P+ + + + IAAG HS A+ + GE + WG
Sbjct: 310 GSNIYGQLGRSKQDLGMKPVDITE----SPISIAAGLGHSLAICNRGERNILSWGWNRSR 365
Query: 280 RLGFGDSDKSSKMVPQRVQLLAGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRLGYGR 339
+LG G + +P+ V+ GE VS G HS+ +T G + +G G +GRLG G
Sbjct: 366 QLGRGKPEN----LPREVEGFDGESPASVSAGRVHSLCVTEKGEAWVWGCGKNGRLGLGS 421
Query: 340 KVTTGQPI 347
+P+
Sbjct: 422 SSDEPEPM 429
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 118/256 (46%), Gaps = 56/256 (21%)
Query: 153 VRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISV--------PVRVQGLENVRLIAV 204
+ ++AG HS+ +T G +W WG+ G + +I + P RV+GLENV + A
Sbjct: 84 ISSISAGHYHSLAVTSSGEIWAWGRN-DEGQLGRIVIDSRDSRSEPKRVEGLENVNVQAA 142
Query: 205 GA--FHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQ-PIPVQGLSGLTLVDIAAGGWHS 261
A + A+ +DG+LW WG ++ GQLG G+ ++ P V+ L+ +V ++ G H+
Sbjct: 143 FASGVVSAAIGDDGSLWVWGRSKRGQLGLGNGIIEARVPSRVENLAAEHVVKVSLGWGHA 202
Query: 262 TALTDDGEVYGWGRGEHGRLG---------FGDSDKSSKMV------------------- 293
ALT DG+V+GWG GR+G DS M
Sbjct: 203 LALTVDGKVFGWGYVADGRVGNVGLPLEASLLDSITDGSMKGHHAAGDLNLEAAEKKVVE 262
Query: 294 -------------PQRVQLLAGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRLGYGRK 340
P V+ E + ++CG HS+ L DG + S G +G+LG ++
Sbjct: 263 AMSKENDMPIAWEPCLVEETCNEKVADIACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQ 322
Query: 341 VTTGQPIEV---PINI 353
+P+++ PI+I
Sbjct: 323 DLGMKPVDITESPISI 338
>AT5G48330.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:19585989-19587729 FORWARD
LENGTH=455
Length = 455
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 94/167 (56%), Gaps = 11/167 (6%)
Query: 190 PVRVQGL-ENVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGT----GDTQPRSQPIPVQ 244
P V L ++ I+ G +H+LA+ G +WAWG N+ GQLG RS+P V+
Sbjct: 74 PTVVSNLPSDISSISAGHYHSLAVTSSGEIWAWGRNDEGQLGRIVIDSSRDSRSEPKRVE 133
Query: 245 GLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDSDKSSKMVPQRVQLLAGED 304
GL + + A G S A+ DDG ++ WGR + G+LG G+ ++ VP RV+ LA E
Sbjct: 134 GLENVNVQAAFASGVVSAAIGDDGSLWVWGRSKRGQLGLGNGIIEAR-VPSRVENLAAEH 192
Query: 305 IVQVSCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKVTTGQPIEVPI 351
+V+VS G H++ALT DG++F +G GR+G G P+E +
Sbjct: 193 VVKVSLGWGHALALTVDGKVFGWGYVADGRVG-----NVGLPLEASL 234
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 137/314 (43%), Gaps = 53/314 (16%)
Query: 52 AICDDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALSHVKIVQAAIGGWHCLAVDDQGR 111
AI DDG L+ WG ++RG LG +PS+V+ L+ +V+ ++G H LA+ G+
Sbjct: 152 AIGDDGSLWVWGRSKRGQLGLGNGIIEARVPSRVENLAAEHVVKVSLGWGHALALTVDGK 211
Query: 112 AYAWGGNEYGQCGEEPERKDDTGRPLRRDIV----------------IPQRCAPKLVVRQ 155
+ WG G+ G + G PL ++ + A K VV
Sbjct: 212 VFGWGYVADGRVG-------NVGLPLEASLLDSITDGSMKGHHAAGDLNLEAAEKKVVEA 264
Query: 156 VAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALQED 215
++ + W P +++ E V IA G+ H+L L D
Sbjct: 265 MSKENDMPIA-------------WEPCLVEETCN-------EKVADIACGSDHSLILCHD 304
Query: 216 GTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGE--VYGW 273
GTL + G+N YGQLG +P+ + + + IAAG HS A+ + GE + W
Sbjct: 305 GTLLSAGSNIYGQLGRSKQDLGMKPVDITE----SPISIAAGLGHSLAICNRGERNILSW 360
Query: 274 GRGEHGRLGFGDSDKSSKMVPQRVQLLAGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHG 333
G +LG G + +P+ V+ GE VS G HS+ +T G + +G G +G
Sbjct: 361 GWNRSRQLGRGKPEN----LPREVEGFDGESPASVSAGRVHSLCVTEKGEAWVWGCGKNG 416
Query: 334 RLGYGRKVTTGQPI 347
RLG G +P+
Sbjct: 417 RLGLGSSSDEPEPM 430
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 118/257 (45%), Gaps = 57/257 (22%)
Query: 153 VRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISV---------PVRVQGLENVRLIA 203
+ ++AG HS+ +T G +W WG+ G + +I + P RV+GLENV + A
Sbjct: 84 ISSISAGHYHSLAVTSSGEIWAWGRN-DEGQLGRIVIDSSRDSRSEPKRVEGLENVNVQA 142
Query: 204 VGA--FHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQ-PIPVQGLSGLTLVDIAAGGWH 260
A + A+ +DG+LW WG ++ GQLG G+ ++ P V+ L+ +V ++ G H
Sbjct: 143 AFASGVVSAAIGDDGSLWVWGRSKRGQLGLGNGIIEARVPSRVENLAAEHVVKVSLGWGH 202
Query: 261 STALTDDGEVYGWGRGEHGRLG---------FGDSDKSSKMV------------------ 293
+ ALT DG+V+GWG GR+G DS M
Sbjct: 203 ALALTVDGKVFGWGYVADGRVGNVGLPLEASLLDSITDGSMKGHHAAGDLNLEAAEKKVV 262
Query: 294 --------------PQRVQLLAGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRLGYGR 339
P V+ E + ++CG HS+ L DG + S G +G+LG +
Sbjct: 263 EAMSKENDMPIAWEPCLVEETCNEKVADIACGSDHSLILCHDGTLLSAGSNIYGQLGRSK 322
Query: 340 KVTTGQPIEV---PINI 353
+ +P+++ PI+I
Sbjct: 323 QDLGMKPVDITESPISI 339
>AT3G03790.3 | Symbols: | ankyrin repeat family protein / regulator
of chromosome condensation (RCC1) family protein |
chr3:963195-968011 FORWARD LENGTH=1099
Length = 1099
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 115/252 (45%), Gaps = 32/252 (12%)
Query: 152 VVRQVAAGGTHSVVLTREGHVWTWG------QPWPPGDIKQ----ISVPVRV---QGLEN 198
++ V+A HSV ++ G V+TWG P DI + P +V G
Sbjct: 187 FIKLVSAAKFHSVAISTHGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRR 246
Query: 199 VRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGG 258
V+ +A H + E G ++ WG+N GQLG ++ P V L +V ++A
Sbjct: 247 VKAVAAAKHHTVIATEGGDVYTWGSNREGQLGYTSVDTQATPRKVTSLKA-KIVAVSAAN 305
Query: 259 WHSTALTDDGEVYGWGRGEHGRLGFGDSDKSSKMVPQRVQLLAGEDIVQVSCGGTHSVAL 318
H+ ++D GEV+ WG + G+LG+G S+ +S P+ V L G+ ++ H++ L
Sbjct: 306 KHTAVVSDCGEVFTWGCNKEGQLGYGTSNSASNYSPRLVDYLKGKVFTAIASSKYHTLVL 365
Query: 319 TRDGRMFSFGRGDHGRLGYGRKVTTGQPIEVPINIPPPQNLSGNEADEGHWISKL----V 374
DG ++++G RL R+V + ++ +GN H L +
Sbjct: 366 RNDGEVYTWGH----RLVTPRRVIISRNLKK----------AGNTLLNFHRRRPLRLTAI 411
Query: 375 ACGGRHTLAIVE 386
A G H+LA+ E
Sbjct: 412 AAGMVHSLALAE 423
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 110/234 (47%), Gaps = 29/234 (12%)
Query: 57 GKLFTWGWNQRGTLGHPPETKTENIPSQVKALSHVKIVQAAIGGWHCLAVDDQGRAYAWG 116
G ++TWG N+ G LG+ T+ P +V +L KIV + H V D G + WG
Sbjct: 264 GDVYTWGSNREGQLGYT-SVDTQATPRKVTSLK-AKIVAVSAANKHTAVVSDCGEVFTWG 321
Query: 117 GNEYGQCGEEPERKDDTGRPLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTREGHVWTWG 176
N+ GQ G P D + + V +A+ H++VL +G V+TWG
Sbjct: 322 CNKEGQLGYGTSNSASNYSPRLVDYLKGK------VFTAIASSKYHTLVLRNDGEVYTWG 375
Query: 177 QPWPPGDIKQISVPVRVQG--LEN------VRL--IAVGAFHNLALQEDGTLWAWGNNEY 226
IS ++ G L N +RL IA G H+LAL EDG + W ++
Sbjct: 376 HRLVTPRRVIISRNLKKAGNTLLNFHRRRPLRLTAIAAGMVHSLALAEDGAFFYWVSS-- 433
Query: 227 GQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGR 280
D+ R Q + L G T+V I+AG + ++A+T GEVY W G++G+
Sbjct: 434 ------DSNLRCQQL--HSLHGKTVVSISAGKYWASAVTSTGEVYMWD-GKNGK 478
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 137/342 (40%), Gaps = 49/342 (14%)
Query: 7 IIAWGSGEDGQLGIGNNEDKEWVCXXXXXXXXXXXXXXXXXXXXLAICDDGKLFTWGWNQ 66
+ +WG+G + QLG GN ++ +AI G+++TWG+ +
Sbjct: 155 VFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWGFGR 214
Query: 67 RGTLGHPPETKTEN------IPSQVKA-LSHVKIVQAAIGGWHCLAVDDQGRAYAWGGNE 119
G LGH PE + P QV + L ++ A H + + G Y WG N
Sbjct: 215 GGRLGH-PEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWGSNR 273
Query: 120 YGQCGEEPERKDDTGRPLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTREGHVWTWGQP- 178
GQ G T R + + K + V+A H+ V++ G V+TWG
Sbjct: 274 EGQLGYTSVDTQATPRKV---------TSLKAKIVAVSAANKHTAVVSDCGEVFTWGCNK 324
Query: 179 -----WPPGDIKQISVPVRVQGLENVRLIAVGA--FHNLALQEDGTLWAWGNNEYGQLGT 231
+ + P V L+ A+ + +H L L+ DG ++ WG+ +L T
Sbjct: 325 EGQLGYGTSNSASNYSPRLVDYLKGKVFTAIASSKYHTLVLRNDGEVYTWGH----RLVT 380
Query: 232 GDTQPRSQPIPVQGLSGLT--------LVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGF 283
S+ + G + L L IAAG HS AL +DG + W +
Sbjct: 381 PRRVIISRNLKKAGNTLLNFHRRRPLRLTAIAAGMVHSLALAEDGAFFYWVSSD------ 434
Query: 284 GDSDKSSKMVPQRVQLLAGEDIVQVSCGGTHSVALTRDGRMF 325
S + Q++ L G+ +V +S G + A+T G ++
Sbjct: 435 ------SNLRCQQLHSLHGKTVVSISAGKYWASAVTSTGEVY 470
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 71/137 (51%), Gaps = 5/137 (3%)
Query: 218 LWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGE 277
+++WGN QLGTG+ + P V L G + ++A +HS A++ GEVY WG G
Sbjct: 155 VFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWGFGR 214
Query: 278 HGRLGFGDSD----KSSKMVPQRVQL-LAGEDIVQVSCGGTHSVALTRDGRMFSFGRGDH 332
GRLG + D +++ + P++V L + V+ H+V T G ++++G
Sbjct: 215 GGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWGSNRE 274
Query: 333 GRLGYGRKVTTGQPIEV 349
G+LGY T P +V
Sbjct: 275 GQLGYTSVDTQATPRKV 291
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 269 EVYGWGRGEHGRLGFGDSDKSSKMVPQRVQLLAGEDIVQVSCGGTHSVALTRDGRMFSFG 328
EV+ WG G + +LG G ++ + VP RV L G I VS HSVA++ G ++++G
Sbjct: 154 EVFSWGNGANYQLGTG--NQHVQKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWG 211
Query: 329 RGDHGRLGYGR-KVTTGQPIEVPINIPPPQNLSGNEADEGHWISKLVACGGRHTLAIVE 386
G GRLG+ + +GQ I P Q +SG G K VA HT+ E
Sbjct: 212 FGRGGRLGHPEFDIHSGQAAV----ITPRQVISG----LGSRRVKAVAAAKHHTVIATE 262
>AT3G03790.1 | Symbols: | ankyrin repeat family protein / regulator
of chromosome condensation (RCC1) family protein |
chr3:963195-967857 FORWARD LENGTH=1078
Length = 1078
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 115/252 (45%), Gaps = 32/252 (12%)
Query: 152 VVRQVAAGGTHSVVLTREGHVWTWG------QPWPPGDIKQ----ISVPVRV---QGLEN 198
++ V+A HSV ++ G V+TWG P DI + P +V G
Sbjct: 184 FIKLVSAAKFHSVAISTHGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRR 243
Query: 199 VRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGG 258
V+ +A H + E G ++ WG+N GQLG ++ P V L +V ++A
Sbjct: 244 VKAVAAAKHHTVIATEGGDVYTWGSNREGQLGYTSVDTQATPRKVTSLKA-KIVAVSAAN 302
Query: 259 WHSTALTDDGEVYGWGRGEHGRLGFGDSDKSSKMVPQRVQLLAGEDIVQVSCGGTHSVAL 318
H+ ++D GEV+ WG + G+LG+G S+ +S P+ V L G+ ++ H++ L
Sbjct: 303 KHTAVVSDCGEVFTWGCNKEGQLGYGTSNSASNYSPRLVDYLKGKVFTAIASSKYHTLVL 362
Query: 319 TRDGRMFSFGRGDHGRLGYGRKVTTGQPIEVPINIPPPQNLSGNEADEGHWISKL----V 374
DG ++++G RL R+V + ++ +GN H L +
Sbjct: 363 RNDGEVYTWGH----RLVTPRRVIISRNLKK----------AGNTLLNFHRRRPLRLTAI 408
Query: 375 ACGGRHTLAIVE 386
A G H+LA+ E
Sbjct: 409 AAGMVHSLALAE 420
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 110/234 (47%), Gaps = 29/234 (12%)
Query: 57 GKLFTWGWNQRGTLGHPPETKTENIPSQVKALSHVKIVQAAIGGWHCLAVDDQGRAYAWG 116
G ++TWG N+ G LG+ T+ P +V +L KIV + H V D G + WG
Sbjct: 261 GDVYTWGSNREGQLGYT-SVDTQATPRKVTSLK-AKIVAVSAANKHTAVVSDCGEVFTWG 318
Query: 117 GNEYGQCGEEPERKDDTGRPLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTREGHVWTWG 176
N+ GQ G P D + + V +A+ H++VL +G V+TWG
Sbjct: 319 CNKEGQLGYGTSNSASNYSPRLVDYLKGK------VFTAIASSKYHTLVLRNDGEVYTWG 372
Query: 177 QPWPPGDIKQISVPVRVQG--LEN------VRL--IAVGAFHNLALQEDGTLWAWGNNEY 226
IS ++ G L N +RL IA G H+LAL EDG + W ++
Sbjct: 373 HRLVTPRRVIISRNLKKAGNTLLNFHRRRPLRLTAIAAGMVHSLALAEDGAFFYWVSS-- 430
Query: 227 GQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGR 280
D+ R Q + L G T+V I+AG + ++A+T GEVY W G++G+
Sbjct: 431 ------DSNLRCQQL--HSLHGKTVVSISAGKYWASAVTSTGEVYMWD-GKNGK 475
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 139/345 (40%), Gaps = 49/345 (14%)
Query: 4 NSPIIAWGSGEDGQLGIGNNEDKEWVCXXXXXXXXXXXXXXXXXXXXLAICDDGKLFTWG 63
+S + +WG+G + QLG GN ++ +AI G+++TWG
Sbjct: 149 SSEVFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWG 208
Query: 64 WNQRGTLGHPPETKTEN------IPSQVKA-LSHVKIVQAAIGGWHCLAVDDQGRAYAWG 116
+ + G LGH PE + P QV + L ++ A H + + G Y WG
Sbjct: 209 FGRGGRLGH-PEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWG 267
Query: 117 GNEYGQCGEEPERKDDTGRPLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTREGHVWTWG 176
N GQ G T R + + K + V+A H+ V++ G V+TWG
Sbjct: 268 SNREGQLGYTSVDTQATPRKV---------TSLKAKIVAVSAANKHTAVVSDCGEVFTWG 318
Query: 177 QP------WPPGDIKQISVPVRVQGLENVRLIAVGA--FHNLALQEDGTLWAWGNNEYGQ 228
+ + P V L+ A+ + +H L L+ DG ++ WG+ +
Sbjct: 319 CNKEGQLGYGTSNSASNYSPRLVDYLKGKVFTAIASSKYHTLVLRNDGEVYTWGH----R 374
Query: 229 LGTGDTQPRSQPIPVQGLSGLT--------LVDIAAGGWHSTALTDDGEVYGWGRGEHGR 280
L T S+ + G + L L IAAG HS AL +DG + W +
Sbjct: 375 LVTPRRVIISRNLKKAGNTLLNFHRRRPLRLTAIAAGMVHSLALAEDGAFFYWVSSD--- 431
Query: 281 LGFGDSDKSSKMVPQRVQLLAGEDIVQVSCGGTHSVALTRDGRMF 325
S + Q++ L G+ +V +S G + A+T G ++
Sbjct: 432 ---------SNLRCQQLHSLHGKTVVSISAGKYWASAVTSTGEVY 467
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 5/142 (3%)
Query: 213 QEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYG 272
Q+ +++WGN QLGTG+ + P V L G + ++A +HS A++ GEVY
Sbjct: 147 QQSSEVFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYT 206
Query: 273 WGRGEHGRLGFGDSD----KSSKMVPQRVQL-LAGEDIVQVSCGGTHSVALTRDGRMFSF 327
WG G GRLG + D +++ + P++V L + V+ H+V T G ++++
Sbjct: 207 WGFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTW 266
Query: 328 GRGDHGRLGYGRKVTTGQPIEV 349
G G+LGY T P +V
Sbjct: 267 GSNREGQLGYTSVDTQATPRKV 288
>AT3G03790.2 | Symbols: | ankyrin repeat family protein / regulator
of chromosome condensation (RCC1) family protein |
chr3:963195-967857 FORWARD LENGTH=1081
Length = 1081
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 115/252 (45%), Gaps = 32/252 (12%)
Query: 152 VVRQVAAGGTHSVVLTREGHVWTWG------QPWPPGDIKQ----ISVPVRV---QGLEN 198
++ V+A HSV ++ G V+TWG P DI + P +V G
Sbjct: 187 FIKLVSAAKFHSVAISTHGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRR 246
Query: 199 VRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGG 258
V+ +A H + E G ++ WG+N GQLG ++ P V L +V ++A
Sbjct: 247 VKAVAAAKHHTVIATEGGDVYTWGSNREGQLGYTSVDTQATPRKVTSLKA-KIVAVSAAN 305
Query: 259 WHSTALTDDGEVYGWGRGEHGRLGFGDSDKSSKMVPQRVQLLAGEDIVQVSCGGTHSVAL 318
H+ ++D GEV+ WG + G+LG+G S+ +S P+ V L G+ ++ H++ L
Sbjct: 306 KHTAVVSDCGEVFTWGCNKEGQLGYGTSNSASNYSPRLVDYLKGKVFTAIASSKYHTLVL 365
Query: 319 TRDGRMFSFGRGDHGRLGYGRKVTTGQPIEVPINIPPPQNLSGNEADEGHWISKL----V 374
DG ++++G RL R+V + ++ +GN H L +
Sbjct: 366 RNDGEVYTWGH----RLVTPRRVIISRNLKK----------AGNTLLNFHRRRPLRLTAI 411
Query: 375 ACGGRHTLAIVE 386
A G H+LA+ E
Sbjct: 412 AAGMVHSLALAE 423
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 110/234 (47%), Gaps = 29/234 (12%)
Query: 57 GKLFTWGWNQRGTLGHPPETKTENIPSQVKALSHVKIVQAAIGGWHCLAVDDQGRAYAWG 116
G ++TWG N+ G LG+ T+ P +V +L KIV + H V D G + WG
Sbjct: 264 GDVYTWGSNREGQLGYT-SVDTQATPRKVTSLK-AKIVAVSAANKHTAVVSDCGEVFTWG 321
Query: 117 GNEYGQCGEEPERKDDTGRPLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTREGHVWTWG 176
N+ GQ G P D + + V +A+ H++VL +G V+TWG
Sbjct: 322 CNKEGQLGYGTSNSASNYSPRLVDYLKGK------VFTAIASSKYHTLVLRNDGEVYTWG 375
Query: 177 QPWPPGDIKQISVPVRVQG--LEN------VRL--IAVGAFHNLALQEDGTLWAWGNNEY 226
IS ++ G L N +RL IA G H+LAL EDG + W ++
Sbjct: 376 HRLVTPRRVIISRNLKKAGNTLLNFHRRRPLRLTAIAAGMVHSLALAEDGAFFYWVSS-- 433
Query: 227 GQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGR 280
D+ R Q + L G T+V I+AG + ++A+T GEVY W G++G+
Sbjct: 434 ------DSNLRCQQL--HSLHGKTVVSISAGKYWASAVTSTGEVYMWD-GKNGK 478
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 137/342 (40%), Gaps = 49/342 (14%)
Query: 7 IIAWGSGEDGQLGIGNNEDKEWVCXXXXXXXXXXXXXXXXXXXXLAICDDGKLFTWGWNQ 66
+ +WG+G + QLG GN ++ +AI G+++TWG+ +
Sbjct: 155 VFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWGFGR 214
Query: 67 RGTLGHPPETKTEN------IPSQVKA-LSHVKIVQAAIGGWHCLAVDDQGRAYAWGGNE 119
G LGH PE + P QV + L ++ A H + + G Y WG N
Sbjct: 215 GGRLGH-PEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWGSNR 273
Query: 120 YGQCGEEPERKDDTGRPLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTREGHVWTWGQP- 178
GQ G T R + + K + V+A H+ V++ G V+TWG
Sbjct: 274 EGQLGYTSVDTQATPRKV---------TSLKAKIVAVSAANKHTAVVSDCGEVFTWGCNK 324
Query: 179 -----WPPGDIKQISVPVRVQGLENVRLIAVGA--FHNLALQEDGTLWAWGNNEYGQLGT 231
+ + P V L+ A+ + +H L L+ DG ++ WG+ +L T
Sbjct: 325 EGQLGYGTSNSASNYSPRLVDYLKGKVFTAIASSKYHTLVLRNDGEVYTWGH----RLVT 380
Query: 232 GDTQPRSQPIPVQGLSGLT--------LVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGF 283
S+ + G + L L IAAG HS AL +DG + W +
Sbjct: 381 PRRVIISRNLKKAGNTLLNFHRRRPLRLTAIAAGMVHSLALAEDGAFFYWVSSD------ 434
Query: 284 GDSDKSSKMVPQRVQLLAGEDIVQVSCGGTHSVALTRDGRMF 325
S + Q++ L G+ +V +S G + A+T G ++
Sbjct: 435 ------SNLRCQQLHSLHGKTVVSISAGKYWASAVTSTGEVY 470
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 71/137 (51%), Gaps = 5/137 (3%)
Query: 218 LWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGE 277
+++WGN QLGTG+ + P V L G + ++A +HS A++ GEVY WG G
Sbjct: 155 VFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWGFGR 214
Query: 278 HGRLGFGDSD----KSSKMVPQRVQL-LAGEDIVQVSCGGTHSVALTRDGRMFSFGRGDH 332
GRLG + D +++ + P++V L + V+ H+V T G ++++G
Sbjct: 215 GGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWGSNRE 274
Query: 333 GRLGYGRKVTTGQPIEV 349
G+LGY T P +V
Sbjct: 275 GQLGYTSVDTQATPRKV 291
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 269 EVYGWGRGEHGRLGFGDSDKSSKMVPQRVQLLAGEDIVQVSCGGTHSVALTRDGRMFSFG 328
EV+ WG G + +LG G ++ + VP RV L G I VS HSVA++ G ++++G
Sbjct: 154 EVFSWGNGANYQLGTG--NQHVQKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWG 211
Query: 329 RGDHGRLGYGR-KVTTGQPIEVPINIPPPQNLSGNEADEGHWISKLVACGGRHTLAIVE 386
G GRLG+ + +GQ I P Q +SG G K VA HT+ E
Sbjct: 212 FGRGGRLGHPEFDIHSGQAAV----ITPRQVISG----LGSRRVKAVAAAKHHTVIATE 262
>AT3G47660.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:17571192-17574805 FORWARD
LENGTH=954
Length = 954
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 123/281 (43%), Gaps = 54/281 (19%)
Query: 81 IPSQVKALSHVKIVQAAI--GGWHCLAVDDQGRAYAWGGNE-----YGQCGEEPERKDDT 133
+P +K SHV + +I G + + V QG+ Y+WG +G C P
Sbjct: 289 LPKVLK--SHVALDAQSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPH----- 341
Query: 134 GRPLRRDIVIPQRCAPKLV-------VRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQ 186
PKL+ V G H+ +T G ++ WG +
Sbjct: 342 ---------------PKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNAGLLG 386
Query: 187 ISV------PVRVQGLEN---VRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPR 237
+ PVR+ G V+ I+ G +H + +G L+ +G+ +G LG GD
Sbjct: 387 LGSGASHWKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRIST 446
Query: 238 SQPIPVQGLSGLTLVDIAAGGWHSTAL-------TDDGEVYGWGRGEHGRLGFGDSDKSS 290
+ P V+ L+G + A G WHS A+ T G+++ WG G+ GRLG GD +
Sbjct: 447 NIPREVEALNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDIE--C 504
Query: 291 KMVPQRVQLLAGEDIVQVSCGGTHSVALTRDGRMFSFGRGD 331
+++P V L QV+CG + +VAL+ G++++ G D
Sbjct: 505 RLIPSCVTELDTTSFQQVACGQSITVALSMSGQVYAMGTAD 545
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 103/225 (45%), Gaps = 27/225 (12%)
Query: 53 ICDDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALSHVKIVQAAIGGWHCLAV------ 106
+ +GKLFT+G G LGH T NIP +V+AL+ + ++AA G WH AV
Sbjct: 421 VTSEGKLFTFGDGTFGALGHGDRIST-NIPREVEALNGCRTIKAACGVWHSAAVVSVFGE 479
Query: 107 -DDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCAPKL---VVRQVAAGGTH 162
G+ + WG + G+ G D R +IP C +L +QVA G +
Sbjct: 480 ATSSGKLFTWGDGDDGRLGH----GDIECR------LIPS-CVTELDTTSFQQVACGQSI 528
Query: 163 SVVLTREGHVWTWGQPWPPGDIKQISVPVRVQG---LENVRLIAVGAFHNLALQEDGTLW 219
+V L+ G V+ G P DI + P ++G V+ +A G H L ++
Sbjct: 529 TVALSMSGQVYAMGTADPSHDI--VRAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVY 586
Query: 220 AWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTAL 264
WG GQLG GDT+ R P V+ L G + + G ++ +
Sbjct: 587 TWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSNYTATI 631
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 148/350 (42%), Gaps = 42/350 (12%)
Query: 53 ICDDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALSHVKIVQAAIGGWHCLAVDDQGRA 112
+ G++++WG G LGH + + P + + + A G +H AV G
Sbjct: 314 VTKQGQMYSWGEESGGRLGHGVCSYVPH-PKLIDEFNGSTVELADCGEFHTCAVTASGDL 372
Query: 113 YAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTREGHV 172
YAWG ++ +P+R ++ Q + V+ ++ G H+ +T EG +
Sbjct: 373 YAWGDGDHNAGLLGLGSGASHWKPVR---ILGQ--MEGIYVKAISCGPWHTAFVTSEGKL 427
Query: 173 WTWGQ----PWPPGDIKQISVPVRVQGLENVRLI--AVGAFHNLAL-------QEDGTLW 219
+T+G GD ++P V+ L R I A G +H+ A+ G L+
Sbjct: 428 FTFGDGTFGALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAVVSVFGEATSSGKLF 487
Query: 220 AWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHG 279
WG+ + G+LG GD + R P V L + +A G + AL+ G+VY
Sbjct: 488 TWGDGDDGRLGHGDIECRLIPSCVTELDTTSFQQVACGQSITVALSMSGQVYA------- 540
Query: 280 RLGFGDSDKSSKMVPQRVQLLAGEDIVQ-VSCGGTHSVALTRDGRMFSFGRGDHGRLGYG 338
+G D P ++ G+ VQ V+CG H L ++++G+G +G+LG+G
Sbjct: 541 -MGTADPSHDIVRAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVYTWGKGSNGQLGHG 599
Query: 339 RKVTTGQPIEVPINIPPPQNLSGNEADEGHWISKLVACGGRHTLAIVEWK 388
P V +A +G + K+V CG +T I K
Sbjct: 600 DTEYRCMPTLV-------------KALKGKQVRKVV-CGSNYTATICLHK 635
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 93/187 (49%), Gaps = 19/187 (10%)
Query: 202 IAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHS 261
I+ G + + + + G +++WG G+LG G P + +G T+ G +H+
Sbjct: 304 ISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEFHT 363
Query: 262 TALTDDGEVYGWGRGEH--GRLGFGDSDKSSKMVPQRVQ-LLAGEDIVQVSCGGTHSVAL 318
A+T G++Y WG G+H G LG G +S P R+ + G + +SCG H+ +
Sbjct: 364 CAVTASGDLYAWGDGDHNAGLLGLGSG--ASHWKPVRILGQMEGIYVKAISCGPWHTAFV 421
Query: 319 TRDGRMFSFGRGDHGRLGYGRKVTTGQPIEVPINIPPPQNLSGNEADEGHWISKLVACGG 378
T +G++F+FG G G LG+G +++T P EV EA G K ACG
Sbjct: 422 TSEGKLFTFGDGTFGALGHGDRISTNIPREV-------------EALNGCRTIK-AACGV 467
Query: 379 RHTLAIV 385
H+ A+V
Sbjct: 468 WHSAAVV 474
>AT1G19880.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr1:6900648-6903818 REVERSE
LENGTH=538
Length = 538
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 104/207 (50%), Gaps = 15/207 (7%)
Query: 190 PVRVQGLE--NVRLIAVG--AFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQG 245
P R++ L N+R +A G +FH +AL +G + WG NE GQLG GD R +P V G
Sbjct: 47 PTRLRPLVGVNIRFVATGCASFHCVALDVEGRCYTWGRNEKGQLGHGDMIQRDRPTVVSG 106
Query: 246 LSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDSDK---SSKMVPQRVQLLAG 302
LS +V AAG H+ ++DDG+ G+G ++G+LG G + S ++ + +
Sbjct: 107 LSKHKIVKAAAGRNHTVVVSDDGQSLGFGWNKYGQLGLGSAKNGFVSVEVESTPLPCVVS 166
Query: 303 EDIVQVSCGGTHSVAL--TRDGRMFSFGRGDHGRLGYGRK---VTTGQPIEVPINIPPPQ 357
+++ V+CG +V L T + + G +G+LG+G + + P
Sbjct: 167 DEVTNVACGADFTVWLSSTEGASILTAGLPQYGQLGHGTDNEFNMKDSSVRLAYEAQPRP 226
Query: 358 NLSGNEADEGHWISKLVACGGRHTLAI 384
+ A G I K VACG HT+A+
Sbjct: 227 KAIASLA--GETIVK-VACGTNHTVAV 250
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 119/253 (47%), Gaps = 33/253 (13%)
Query: 140 DIVIPQRCAPKL--VVRQVAAG--GTHSVVLTREGHVWTWGQPWP----PGDIKQISVPV 191
++V P R P + +R VA G H V L EG +TWG+ GD+ Q P
Sbjct: 43 NLVSPTRLRPLVGVNIRFVATGCASFHCVALDVEGRCYTWGRNEKGQLGHGDMIQRDRPT 102
Query: 192 RVQGLENVRLI--AVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQP-------RSQPIP 242
V GL +++ A G H + + +DG +G N+YGQLG G + S P+P
Sbjct: 103 VVSGLSKHKIVKAAAGRNHTVVVSDDGQSLGFGWNKYGQLGLGSAKNGFVSVEVESTPLP 162
Query: 243 VQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLG------FGDSDKSSKMV--- 293
+T V A + T+ + G ++G+LG F D S ++
Sbjct: 163 CVVSDEVTNVACGADFTVWLSSTEGASILTAGLPQYGQLGHGTDNEFNMKDSSVRLAYEA 222
Query: 294 ---PQRVQLLAGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKVTTGQPIEVP 350
P+ + LAGE IV+V+CG H+VA+ ++G ++++G G +GRLG+ + P +
Sbjct: 223 QPRPKAIASLAGETIVKVACGTNHTVAVDKNGYVYTWGFGGYGRLGHREQKDEWAPRRID 282
Query: 351 I----NIPPPQNL 359
+ N+ PP +
Sbjct: 283 VFQRNNVLPPNAI 295
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 129/285 (45%), Gaps = 51/285 (17%)
Query: 82 PSQVKALSHVKIVQAAIG--GWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRR 139
P++++ L V I A G +HC+A+D +GR Y WG NE GQ G G ++R
Sbjct: 47 PTRLRPLVGVNIRFVATGCASFHCVALDVEGRCYTWGRNEKGQLGH--------GDMIQR 98
Query: 140 DIVIPQRCAPKLVVRQVAAGGTHSVVLTREGHVWTWGQPWPP------GDIKQISVPVRV 193
D K + + AAG H+VV++ +G +G W G K V V V
Sbjct: 99 DRPTVVSGLSKHKIVKAAAGRNHTVVVSDDGQSLGFG--WNKYGQLGLGSAKNGFVSVEV 156
Query: 194 QGL-------ENVRLIAVGAFHN--LALQEDGTLWAWGNNEYGQLGTG------------ 232
+ + V +A GA L+ E ++ G +YGQLG G
Sbjct: 157 ESTPLPCVVSDEVTNVACGADFTVWLSSTEGASILTAGLPQYGQLGHGTDNEFNMKDSSV 216
Query: 233 ----DTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDSDK 288
+ QPR P + L+G T+V +A G H+ A+ +G VY WG G +GRLG ++
Sbjct: 217 RLAYEAQPR--PKAIASLAGETIVKVACGTNHTVAVDKNGYVYTWGFGGYGRLGH--REQ 272
Query: 289 SSKMVPQRVQLLAGEDIVQ----VSCGGTHSVALTRDGRMFSFGR 329
+ P+R+ + +++ +S G +S G+++ +G+
Sbjct: 273 KDEWAPRRIDVFQRNNVLPPNAILSAGSANSACTAGGGQLYMWGK 317
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 137/340 (40%), Gaps = 77/340 (22%)
Query: 51 LAICDDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALSHVKIVQAAIGGWHCLAVDDQG 110
+A+ +G+ +TWG N++G LGH + + P+ V LS KIV+AA G H + V D G
Sbjct: 71 VALDVEGRCYTWGRNEKGQLGHGDMIQRDR-PTVVSGLSKHKIVKAAAGRNHTVVVSDDG 129
Query: 111 RAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCAPKLVVRQVAAGGTHSVVL--TR 168
++ +G N+YGQ G + + P C V VA G +V L T
Sbjct: 130 QSLGFGWNKYGQLGLGSAKNGFVSVEVES---TPLPCVVSDEVTNVACGADFTVWLSSTE 186
Query: 169 EGHVWTWGQPW---------PPGDIKQISV---------PVRVQGL--ENVRLIAVGAFH 208
+ T G P ++K SV P + L E + +A G H
Sbjct: 187 GASILTAGLPQYGQLGHGTDNEFNMKDSSVRLAYEAQPRPKAIASLAGETIVKVACGTNH 246
Query: 209 NLALQEDGTLWAWGNNEYGQLGTGDTQ----PRS-------------------------- 238
+A+ ++G ++ WG YG+LG + + PR
Sbjct: 247 TVAVDKNGYVYTWGFGGYGRLGHREQKDEWAPRRIDVFQRNNVLPPNAILSAGSANSACT 306
Query: 239 --------------------QPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEH 278
P P+ LSG L + +G H + D WG ++
Sbjct: 307 AGGGQLYMWGKIKNNGDDWMYPKPMMDLSGWNLRWMDSGSMHHF-VGADSSCISWGHAQY 365
Query: 279 GRLGFGDSDKSSKMVPQRVQLLAGEDIVQVSCGGTHSVAL 318
G LG+G + + S P++V +L G ++ V+CG HS+ +
Sbjct: 366 GELGYGPNGQKSSAAPKKVDMLEGMHVMGVACGFCHSMVI 405