Miyakogusa Predicted Gene
- Lj2g3v0136400.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0136400.1 gene.g38468.t1.1
(604 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G01830.2 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE dom... 863 0.0
AT2G01830.1 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE dom... 863 0.0
AT2G01830.3 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE dom... 863 0.0
AT1G27320.1 | Symbols: AHK3, HK3 | histidine kinase 3 | chr1:948... 629 e-180
AT5G35750.1 | Symbols: AHK2, HK2 | histidine kinase 2 | chr5:139... 627 e-180
AT2G17820.1 | Symbols: ATHK1, AHK1, HK1 | histidine kinase 1 | c... 132 6e-31
AT5G10720.1 | Symbols: AHK5, CKI2, HK5 | histidine kinase 5 | ch... 131 2e-30
AT1G66340.1 | Symbols: ETR1, EIN1, ETR, AtETR1 | Signal transduc... 115 1e-25
AT2G47430.1 | Symbols: CKI1 | Signal transduction histidine kina... 105 9e-23
AT2G40940.1 | Symbols: ERS1, ERS | ethylene response sensor 1 | ... 91 2e-18
AT4G18130.1 | Symbols: PHYE | phytochrome E | chr4:10042312-1004... 64 2e-10
AT1G09570.1 | Symbols: PHYA, FHY2, FRE1, HY8 | phytochrome A | c... 54 3e-07
AT1G09570.2 | Symbols: PHYA, FHY2, FRE1, HY8 | phytochrome A | c... 54 4e-07
>AT2G01830.2 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE domain
containing histidine kinase protein | chr2:363332-368016
REVERSE LENGTH=1080
Length = 1080
Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/679 (66%), Positives = 510/679 (75%), Gaps = 96/679 (14%)
Query: 1 MLQDQFSVSVNHVHALAILVSTFHYYRNPSAIDEETFAEYTARTAFERPLLSGVAYAQRV 60
MLQDQFSVSVNHVHALAILVSTFHY++NPSAID+ETFAEYTARTAFERPLLSGVAYA++V
Sbjct: 171 MLQDQFSVSVNHVHALAILVSTFHYHKNPSAIDQETFAEYTARTAFERPLLSGVAYAEKV 230
Query: 61 INSERERFEKQHGWVIKTMER-ESSQVRDEYAPVIFAQETVSYLESLDMMSGEEDQENIL 119
+N ERE FE+QH WVIKTM+R E S VRDEYAPVIF+Q++VSYLESLDMMSGEED+ENIL
Sbjct: 231 VNFEREMFERQHNWVIKTMDRGEPSPVRDEYAPVIFSQDSVSYLESLDMMSGEEDRENIL 290
Query: 120 RARATGKAVLTSPFRLLGSHHLGVVLTFPVYKSKLPPKPTLEERIEATAGYVGGSFDVES 179
RAR TGKAVLTSPFRLL +HHLGVVLTFPVYKS LP PT+EERI ATAGY+GG+FDVES
Sbjct: 291 RARETGKAVLTSPFRLLETHHLGVVLTFPVYKSSLPENPTVEERIAATAGYLGGAFDVES 350
Query: 180 LVENLLGQLAGNQAILVNVYDITNCSNPLTMYGNHSEEADMSLSYESKLDFGDPYRIHQM 239
LVENLLGQLAGNQAI+V+VYDITN S+PL MYGN EEAD SLS+ESKLDFGDP+R H+M
Sbjct: 351 LVENLLGQLAGNQAIVVHVYDITNASDPLVMYGNQDEEADRSLSHESKLDFGDPFRKHKM 410
Query: 240 I---------------------------------SGNHIVKVEDDFHEMQDLKVRAEAAD 266
I + HIVKVEDDFHEMQ+LKVRAEAAD
Sbjct: 411 ICRYHQKAPIPLNVLTTVPLFFAIGFLVGYILYGAAMHIVKVEDDFHEMQELKVRAEAAD 470
Query: 267 VAKSQFLATVSHEIRTPMNGILGMMALLLDTELSSTQRDYAQTAQACGKALITLINEVLD 326
VAKSQFLATVSHEIRTPMNGILGM+A+LLDTELSSTQRDYAQTAQ CGKALI LINEVLD
Sbjct: 471 VAKSQFLATVSHEIRTPMNGILGMLAMLLDTELSSTQRDYAQTAQVCGKALIALINEVLD 530
Query: 327 RAKIEAGKLELEAVPFDLRSILDDVLSLFSEKSRHKSLE--------------------- 365
RAKIEAGKLELE+VPFD+RSILDDVLSLFSE+SR+KS+E
Sbjct: 531 RAKIEAGKLELESVPFDIRSILDDVLSLFSEESRNKSIELAVFVSDKVPEIVKGDSGRFR 590
Query: 366 ------------FTEQGHIFVKVHL----EDNINP--VMNGKHETILNGESDEVFHLSGD 407
FTE+GHIFVKVHL +D P +NG G S+E+ +S
Sbjct: 591 QIIINLVGNSVKFTEKGHIFVKVHLAEQSKDESEPKNALNG-------GVSEEMIVVSKQ 643
Query: 408 CHFKTLSGCEAVDEQNSWENFKHLIANEERY--FDCSSKMAATSESSEQVKLRVCVEDTG 465
+ TLSG EA D +NSW++FKHL++ E+ FD SS V+L V +EDTG
Sbjct: 644 SSYNTLSGYEAADGRNSWDSFKHLVSEEQSLSEFDISS----------NVRLMVSIEDTG 693
Query: 466 TGIPFSAQDTIFMPFVQADSSTSRNYGGTGIGLSISKCLVELMGGQINFTSRPQVGSTFS 525
GIP AQ +FMPF+QADSSTSRNYGGTGIGLSISKCLVELM GQINF SRP +GSTF
Sbjct: 694 IGIPLVAQGRVFMPFMQADSSTSRNYGGTGIGLSISKCLVELMRGQINFISRPHIGSTFW 753
Query: 526 FTAAFGMFKK-NSVSDMKKLNLEDLPSSFRGLKVIVVDGKPVRAAVTRYHLKRLGILVKV 584
FTA K ++++ MKK N+E LPS+F+G+K IVVD KPVRAAVTRYH+KRLGI V V
Sbjct: 754 FTAVLEKCDKCSAINHMKKPNVEHLPSTFKGMKAIVVDAKPVRAAVTRYHMKRLGINVDV 813
Query: 585 ANSISQAVALCG---KNGS 600
S+ AV +NGS
Sbjct: 814 VTSLKTAVVAAAAFERNGS 832
>AT2G01830.1 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE domain
containing histidine kinase protein | chr2:363332-367429
REVERSE LENGTH=1057
Length = 1057
Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/679 (66%), Positives = 510/679 (75%), Gaps = 96/679 (14%)
Query: 1 MLQDQFSVSVNHVHALAILVSTFHYYRNPSAIDEETFAEYTARTAFERPLLSGVAYAQRV 60
MLQDQFSVSVNHVHALAILVSTFHY++NPSAID+ETFAEYTARTAFERPLLSGVAYA++V
Sbjct: 148 MLQDQFSVSVNHVHALAILVSTFHYHKNPSAIDQETFAEYTARTAFERPLLSGVAYAEKV 207
Query: 61 INSERERFEKQHGWVIKTMER-ESSQVRDEYAPVIFAQETVSYLESLDMMSGEEDQENIL 119
+N ERE FE+QH WVIKTM+R E S VRDEYAPVIF+Q++VSYLESLDMMSGEED+ENIL
Sbjct: 208 VNFEREMFERQHNWVIKTMDRGEPSPVRDEYAPVIFSQDSVSYLESLDMMSGEEDRENIL 267
Query: 120 RARATGKAVLTSPFRLLGSHHLGVVLTFPVYKSKLPPKPTLEERIEATAGYVGGSFDVES 179
RAR TGKAVLTSPFRLL +HHLGVVLTFPVYKS LP PT+EERI ATAGY+GG+FDVES
Sbjct: 268 RARETGKAVLTSPFRLLETHHLGVVLTFPVYKSSLPENPTVEERIAATAGYLGGAFDVES 327
Query: 180 LVENLLGQLAGNQAILVNVYDITNCSNPLTMYGNHSEEADMSLSYESKLDFGDPYRIHQM 239
LVENLLGQLAGNQAI+V+VYDITN S+PL MYGN EEAD SLS+ESKLDFGDP+R H+M
Sbjct: 328 LVENLLGQLAGNQAIVVHVYDITNASDPLVMYGNQDEEADRSLSHESKLDFGDPFRKHKM 387
Query: 240 I---------------------------------SGNHIVKVEDDFHEMQDLKVRAEAAD 266
I + HIVKVEDDFHEMQ+LKVRAEAAD
Sbjct: 388 ICRYHQKAPIPLNVLTTVPLFFAIGFLVGYILYGAAMHIVKVEDDFHEMQELKVRAEAAD 447
Query: 267 VAKSQFLATVSHEIRTPMNGILGMMALLLDTELSSTQRDYAQTAQACGKALITLINEVLD 326
VAKSQFLATVSHEIRTPMNGILGM+A+LLDTELSSTQRDYAQTAQ CGKALI LINEVLD
Sbjct: 448 VAKSQFLATVSHEIRTPMNGILGMLAMLLDTELSSTQRDYAQTAQVCGKALIALINEVLD 507
Query: 327 RAKIEAGKLELEAVPFDLRSILDDVLSLFSEKSRHKSLE--------------------- 365
RAKIEAGKLELE+VPFD+RSILDDVLSLFSE+SR+KS+E
Sbjct: 508 RAKIEAGKLELESVPFDIRSILDDVLSLFSEESRNKSIELAVFVSDKVPEIVKGDSGRFR 567
Query: 366 ------------FTEQGHIFVKVHL----EDNINP--VMNGKHETILNGESDEVFHLSGD 407
FTE+GHIFVKVHL +D P +NG G S+E+ +S
Sbjct: 568 QIIINLVGNSVKFTEKGHIFVKVHLAEQSKDESEPKNALNG-------GVSEEMIVVSKQ 620
Query: 408 CHFKTLSGCEAVDEQNSWENFKHLIANEERY--FDCSSKMAATSESSEQVKLRVCVEDTG 465
+ TLSG EA D +NSW++FKHL++ E+ FD SS V+L V +EDTG
Sbjct: 621 SSYNTLSGYEAADGRNSWDSFKHLVSEEQSLSEFDISS----------NVRLMVSIEDTG 670
Query: 466 TGIPFSAQDTIFMPFVQADSSTSRNYGGTGIGLSISKCLVELMGGQINFTSRPQVGSTFS 525
GIP AQ +FMPF+QADSSTSRNYGGTGIGLSISKCLVELM GQINF SRP +GSTF
Sbjct: 671 IGIPLVAQGRVFMPFMQADSSTSRNYGGTGIGLSISKCLVELMRGQINFISRPHIGSTFW 730
Query: 526 FTAAFGMFKK-NSVSDMKKLNLEDLPSSFRGLKVIVVDGKPVRAAVTRYHLKRLGILVKV 584
FTA K ++++ MKK N+E LPS+F+G+K IVVD KPVRAAVTRYH+KRLGI V V
Sbjct: 731 FTAVLEKCDKCSAINHMKKPNVEHLPSTFKGMKAIVVDAKPVRAAVTRYHMKRLGINVDV 790
Query: 585 ANSISQAVALCG---KNGS 600
S+ AV +NGS
Sbjct: 791 VTSLKTAVVAAAAFERNGS 809
>AT2G01830.3 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE domain
containing histidine kinase protein | chr2:363332-367429
REVERSE LENGTH=1057
Length = 1057
Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/679 (66%), Positives = 510/679 (75%), Gaps = 96/679 (14%)
Query: 1 MLQDQFSVSVNHVHALAILVSTFHYYRNPSAIDEETFAEYTARTAFERPLLSGVAYAQRV 60
MLQDQFSVSVNHVHALAILVSTFHY++NPSAID+ETFAEYTARTAFERPLLSGVAYA++V
Sbjct: 148 MLQDQFSVSVNHVHALAILVSTFHYHKNPSAIDQETFAEYTARTAFERPLLSGVAYAEKV 207
Query: 61 INSERERFEKQHGWVIKTMER-ESSQVRDEYAPVIFAQETVSYLESLDMMSGEEDQENIL 119
+N ERE FE+QH WVIKTM+R E S VRDEYAPVIF+Q++VSYLESLDMMSGEED+ENIL
Sbjct: 208 VNFEREMFERQHNWVIKTMDRGEPSPVRDEYAPVIFSQDSVSYLESLDMMSGEEDRENIL 267
Query: 120 RARATGKAVLTSPFRLLGSHHLGVVLTFPVYKSKLPPKPTLEERIEATAGYVGGSFDVES 179
RAR TGKAVLTSPFRLL +HHLGVVLTFPVYKS LP PT+EERI ATAGY+GG+FDVES
Sbjct: 268 RARETGKAVLTSPFRLLETHHLGVVLTFPVYKSSLPENPTVEERIAATAGYLGGAFDVES 327
Query: 180 LVENLLGQLAGNQAILVNVYDITNCSNPLTMYGNHSEEADMSLSYESKLDFGDPYRIHQM 239
LVENLLGQLAGNQAI+V+VYDITN S+PL MYGN EEAD SLS+ESKLDFGDP+R H+M
Sbjct: 328 LVENLLGQLAGNQAIVVHVYDITNASDPLVMYGNQDEEADRSLSHESKLDFGDPFRKHKM 387
Query: 240 I---------------------------------SGNHIVKVEDDFHEMQDLKVRAEAAD 266
I + HIVKVEDDFHEMQ+LKVRAEAAD
Sbjct: 388 ICRYHQKAPIPLNVLTTVPLFFAIGFLVGYILYGAAMHIVKVEDDFHEMQELKVRAEAAD 447
Query: 267 VAKSQFLATVSHEIRTPMNGILGMMALLLDTELSSTQRDYAQTAQACGKALITLINEVLD 326
VAKSQFLATVSHEIRTPMNGILGM+A+LLDTELSSTQRDYAQTAQ CGKALI LINEVLD
Sbjct: 448 VAKSQFLATVSHEIRTPMNGILGMLAMLLDTELSSTQRDYAQTAQVCGKALIALINEVLD 507
Query: 327 RAKIEAGKLELEAVPFDLRSILDDVLSLFSEKSRHKSLE--------------------- 365
RAKIEAGKLELE+VPFD+RSILDDVLSLFSE+SR+KS+E
Sbjct: 508 RAKIEAGKLELESVPFDIRSILDDVLSLFSEESRNKSIELAVFVSDKVPEIVKGDSGRFR 567
Query: 366 ------------FTEQGHIFVKVHL----EDNINP--VMNGKHETILNGESDEVFHLSGD 407
FTE+GHIFVKVHL +D P +NG G S+E+ +S
Sbjct: 568 QIIINLVGNSVKFTEKGHIFVKVHLAEQSKDESEPKNALNG-------GVSEEMIVVSKQ 620
Query: 408 CHFKTLSGCEAVDEQNSWENFKHLIANEERY--FDCSSKMAATSESSEQVKLRVCVEDTG 465
+ TLSG EA D +NSW++FKHL++ E+ FD SS V+L V +EDTG
Sbjct: 621 SSYNTLSGYEAADGRNSWDSFKHLVSEEQSLSEFDISS----------NVRLMVSIEDTG 670
Query: 466 TGIPFSAQDTIFMPFVQADSSTSRNYGGTGIGLSISKCLVELMGGQINFTSRPQVGSTFS 525
GIP AQ +FMPF+QADSSTSRNYGGTGIGLSISKCLVELM GQINF SRP +GSTF
Sbjct: 671 IGIPLVAQGRVFMPFMQADSSTSRNYGGTGIGLSISKCLVELMRGQINFISRPHIGSTFW 730
Query: 526 FTAAFGMFKK-NSVSDMKKLNLEDLPSSFRGLKVIVVDGKPVRAAVTRYHLKRLGILVKV 584
FTA K ++++ MKK N+E LPS+F+G+K IVVD KPVRAAVTRYH+KRLGI V V
Sbjct: 731 FTAVLEKCDKCSAINHMKKPNVEHLPSTFKGMKAIVVDAKPVRAAVTRYHMKRLGINVDV 790
Query: 585 ANSISQAVALCG---KNGS 600
S+ AV +NGS
Sbjct: 791 VTSLKTAVVAAAAFERNGS 809
>AT1G27320.1 | Symbols: AHK3, HK3 | histidine kinase 3 |
chr1:9487780-9492027 FORWARD LENGTH=1036
Length = 1036
Score = 629 bits (1623), Expect = e-180, Method: Compositional matrix adjust.
Identities = 352/676 (52%), Positives = 434/676 (64%), Gaps = 114/676 (16%)
Query: 1 MLQDQFSVSVNHVHALAILVSTFHYYRNPSAIDEETFAEYTARTAFERPLLSGVAYAQRV 60
MLQDQF+VS+NHV A++IL+STFH+ + PSAID+ TF+EYT RT+FERPL SGVAYA RV
Sbjct: 136 MLQDQFNVSMNHVQAMSILISTFHHGKIPSAIDQRTFSEYTDRTSFERPLTSGVAYAMRV 195
Query: 61 INSERERFEKQHGWVIKTM----------------ERESSQVRDEYAPVIFAQETVSYLE 104
++SERE FE+Q GW I+ M E S V++EYAPVIFAQ+TVS++
Sbjct: 196 LHSEREEFERQQGWTIRKMYSLEQNPVHKDDYDLEALEPSPVQEEYAPVIFAQDTVSHVV 255
Query: 105 SLDMMSGEEDQENILRARATGKAVLTSPFRLLGSHHLGVVLTFPVYKSKLPPKPTLEERI 164
SLDM+SG+ED+EN+LRAR++GK VLT+PF L+ ++ LGV+LTF VYK LP T +ERI
Sbjct: 256 SLDMLSGKEDRENVLRARSSGKGVLTAPFPLIKTNRLGVILTFAVYKRDLPSNATPKERI 315
Query: 165 EATAGYVGGSFDVESLVENLLGQLAGNQAILVNVYDITNCSNPLTMYGNHSEEADMSLSY 224
EAT GY+GG FD+ESLVENLL QLA Q ILVNVYDITN S P++MYG + AD L
Sbjct: 316 EATNGYLGGVFDIESLVENLLQQLASKQTILVNVYDITNHSQPISMYGTNVS-AD-GLER 373
Query: 225 ESKLDFGDPYRIHQM-------------------------ISGNHIV--------KVEDD 251
S L FGDP R H+M + HI+ KVE+D
Sbjct: 374 VSPLIFGDPLRKHEMRCRFKQKPPWPVLSMVTSFGILVIALLVAHIIHATVSRIHKVEED 433
Query: 252 FHEMQDLKVRAEAADVAKSQFLATVSHEIRTPMNGILGMMALLLDTELSSTQRDYAQTAQ 311
+M+ LK +AEAADVAKSQFLATVSHEIRTPMNG+LGM+ +L+DTEL TQ+DY +TAQ
Sbjct: 434 CDKMKQLKKKAEAADVAKSQFLATVSHEIRTPMNGVLGMLHMLMDTELDVTQQDYVRTAQ 493
Query: 312 ACGKALITLINEVLDRAKIEAGKLELEAVPFDLRSILDDVLSLFSEKSRHK--------- 362
A GKAL++LINEVLD+AKIE+GKLELE V FDLR ILDDVLSLFS KS+ K
Sbjct: 494 ASGKALVSLINEVLDQAKIESGKLELEEVRFDLRGILDDVLSLFSSKSQQKGVELAVYIS 553
Query: 363 ------------------------SLEFTEQGHIFVKVHLEDNINPVMNGKHETILNGES 398
S++FTE+GHIFV VHL D + ++G ET + ES
Sbjct: 554 DRVPDMLIGDPGRFRQILTNLMGNSIKFTEKGHIFVTVHLVDELFESIDG--ETASSPES 611
Query: 399 DEVFHLSGDCHFKTLSGCEAVDEQNSWENFKHLIANEERYFDCSSKMAATSESSEQVKLR 458
TLSG D Q SWENFK +N R F+ S + L
Sbjct: 612 -------------TLSGLPVADRQRSWENFKAFSSNGHRSFE---------PSPPDINLI 649
Query: 459 VCVEDTGTGIPFSAQDTIFMPFVQADSSTSRNYGGTGIGLSISKCLVELMGGQINFTSRP 518
V VEDTG GIP AQ IF PF+Q S SR +GGTGIGLSISKCLV LM G+I F+S P
Sbjct: 650 VSVEDTGVGIPVEAQSRIFTPFMQVGPSISRTHGGTGIGLSISKCLVGLMKGEIGFSSTP 709
Query: 519 QVGSTFSFTAAFGMFKKNSVSDMKKLNLEDLP--SSFRGLKVIVVDGKPVRAAVTRYHLK 576
+VGSTF+FTA F N + ++ N + P S FRG+K +VVD +P RA V+ YH +
Sbjct: 710 KVGSTFTFTAVFS----NGMQPAERKNDNNQPIFSEFRGMKAVVVDHRPARAKVSWYHFQ 765
Query: 577 RLGILVKVANSISQAV 592
RLGI V+V + QA+
Sbjct: 766 RLGIRVEVVPRVEQAL 781
>AT5G35750.1 | Symbols: AHK2, HK2 | histidine kinase 2 |
chr5:13911743-13916337 REVERSE LENGTH=1176
Length = 1176
Score = 627 bits (1618), Expect = e-180, Method: Compositional matrix adjust.
Identities = 348/677 (51%), Positives = 434/677 (64%), Gaps = 104/677 (15%)
Query: 1 MLQDQFSVSVNHVHALAILVSTFHYYRNPSAIDEETFAEYTARTAFERPLLSGVAYAQRV 60
+LQDQF+VS+NHVHAL+ILVSTFH+ + PSAID+ TF EYT RT FERPL SGVAYA +V
Sbjct: 275 VLQDQFNVSLNHVHALSILVSTFHHGKIPSAIDQRTFEEYTERTNFERPLTSGVAYALKV 334
Query: 61 INSERERFEKQHGWVIKTMERESSQV--------------RDEYAPVIFAQETVSYLESL 106
+SERE+FEK+HGW IK ME E V +DEYAPVIFAQETVS++ S+
Sbjct: 335 PHSEREKFEKEHGWAIKKMETEDQTVVQDCVPENFDPAPIQDEYAPVIFAQETVSHIVSV 394
Query: 107 DMMSGEEDQENILRARATGKAVLTSPFRLLGSHHLGVVLTFPVYKSKLPPKPTLEERIEA 166
DMMSGEED+ENILRARA+GK VLTSPF+LL S+HLGVVLTF VY + LPP T E+R+EA
Sbjct: 395 DMMSGEEDRENILRARASGKGVLTSPFKLLKSNHLGVVLTFAVYDTSLPPDATEEQRVEA 454
Query: 167 TAGYVGGSFDVESLVENLLGQLAGNQAILVNVYDITNCSNPLTMYGNHSEEADMSLSYES 226
T GY+G S+D+ SLVE LL QLA Q I V+VYD TN S + MYG SE D+S + S
Sbjct: 455 TIGYLGASYDMPSLVEKLLHQLASKQTIAVDVYDTTNTSGLIKMYG--SEIGDISEQHIS 512
Query: 227 KLDFGDPYRIHQM--------------------------ISG-------NHIVKVEDDFH 253
LDFGDP R H+M + G N I VE+D
Sbjct: 513 SLDFGDPSRNHEMHCRFKHKLPIPWTAITPSILVLVITFLVGYILYEAINRIATVEEDCQ 572
Query: 254 EMQDLKVRAEAADVAKSQFLATVSHEIRTPMNGILGMMALLLDTELSSTQRDYAQTAQAC 313
+M++LK RAEAAD+AKSQFLATVSHEIRTPMNG+LGM+ +L+DT+L + Q DYAQTA
Sbjct: 573 KMRELKARAEAADIAKSQFLATVSHEIRTPMNGVLGMLKMLMDTDLDAKQMDYAQTAHGS 632
Query: 314 GKALITLINEVLDRAKIEAGKLELEAVPFDLRSILDDVLSLFSEKSRHK----------- 362
GK L +LINEVLD+AKIE+G+LELE VPFD+R ILD+V SL S K+ K
Sbjct: 633 GKDLTSLINEVLDQAKIESGRLELENVPFDMRFILDNVSSLLSGKANEKGIELAVYVSSQ 692
Query: 363 ----------------------SLEFT-EQGHIFVKVHLEDNINPVMNGKHETILNGESD 399
S++FT E+GHIF+ VHL D + + TI +
Sbjct: 693 VPDVVVGDPSRFRQIITNLVGNSIKFTQERGHIFISVHLADEVKEPL-----TIEDAVLK 747
Query: 400 EVFHLSGDCHFKTLSGCEAVDEQNSWENFKHLIANEERYFDCSSKMAATSESSEQVKLRV 459
+ L +T+SG AV+ SW+NFK + E S++S+Q+KL V
Sbjct: 748 QRLALGCSESGETVSGFPAVNAWGSWKNFKTCYSTE-------------SQNSDQIKLLV 794
Query: 460 CVEDTGTGIPFSAQDTIFMPFVQADSSTSRNYGGTGIGLSISKCLVELMGGQINFTSRPQ 519
VEDTG GIP AQ IF PF+QADSSTSR YGGTGIGLSISK LVELM G++ F S P
Sbjct: 795 TVEDTGVGIPVDAQGRIFTPFMQADSSTSRTYGGTGIGLSISKRLVELMQGEMGFVSEPG 854
Query: 520 VGSTFSFTAAFGMFKKN-SVSDMKKLNLEDLPSSFRGLKVIVVDGKPVRAAVTRYHLKRL 578
+GSTFSFT FG + N S++ +++ +L F GL+ +V+D + +RA VTRY L+RL
Sbjct: 855 IGSTFSFTGVFGKAETNTSITKLERFDLA--IQEFTGLRALVIDNRNIRAEVTRYELRRL 912
Query: 579 GILVKVANSISQAVALC 595
GI + +S+ A C
Sbjct: 913 GISADIVSSLRMACTCC 929
>AT2G17820.1 | Symbols: ATHK1, AHK1, HK1 | histidine kinase 1 |
chr2:7743133-7748013 REVERSE LENGTH=1207
Length = 1207
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 145/283 (51%), Gaps = 33/283 (11%)
Query: 257 DLKVRAEAADVAKSQFLATVSHEIRTPMNGILGMMALLL-DTELSSTQRDYAQTAQACGK 315
D + RAEA+ KSQFLA +SHE+RTPM ++G++ +L+ D LS+ Q + C
Sbjct: 487 DARRRAEASSNYKSQFLANMSHELRTPMAAVIGLLDILISDDCLSNEQYATVTQIRKCST 546
Query: 316 ALITLINEVLDRAKIEAGKLELEAVPFDLRSILDDVLSLFSEKSRHKSLEFTEQGHIFVK 375
AL+ L+N +LD +K+E+GKL LE FDL L+ ++ +FS + + ++E
Sbjct: 547 ALLRLLNNILDLSKVESGKLVLEEAEFDLGRELEGLVDMFSVQCINHNVETV-------- 598
Query: 376 VHLEDNINPVMNGKHETIL----NGESDEV-FHLSGDCHFKTLSGCE-----------AV 419
+ L D++ ++ G ++ N S+ + F +G H CE +V
Sbjct: 599 LDLSDDMPALVRGDSARLVQIFANLISNSIKFTTTG--HIILRGWCENINSLHDEMSVSV 656
Query: 420 DEQNSWENFKHLIANEERYFDCSSKMAATSESSEQVKLRVCVEDTGTGIPFSAQDTIFMP 479
D + W K + S K A ++ L V+DTG GI S D++F
Sbjct: 657 DRRKPWAPMKTKQVQHRNHLQKSCKNA------NKMVLWFEVDDTGCGIDPSKWDSVFES 710
Query: 480 FVQADSSTSRNYGGTGIGLSISKCLVELMGGQINFTSRPQVGS 522
F QAD ST+R +GGTG+GL I + LV MGG+I + +G+
Sbjct: 711 FEQADPSTTRTHGGTGLGLCIVRNLVNKMGGEIKVVQKNGLGT 753
>AT5G10720.1 | Symbols: AHK5, CKI2, HK5 | histidine kinase 5 |
chr5:3386835-3390541 FORWARD LENGTH=922
Length = 922
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 146/278 (52%), Gaps = 32/278 (11%)
Query: 271 QFLATVSHEIRTPMNGILGMMALLLDTELSSTQRDYAQTAQACGKALITLINEVLDRAKI 330
Q LAT+SHEIR+P++G++GM +L T+L QR + G ++ LIN++LD +K+
Sbjct: 369 QMLATMSHEIRSPLSGVVGMAEILSTTKLDKEQRQLLNVMISSGDLVLQLINDILDLSKV 428
Query: 331 EAGKLELEAVPFDLRSILDDVLSLFSEKSRHKSLEFTEQGHIFVKVHLEDNINPVMNGKH 390
E+G + LEA F R ++ VL + S KSL T +G+I V +E + V+ +
Sbjct: 429 ESGVMRLEATKFRPREVVKHVLQT-AAASLKKSL--TLEGNIADDVPIE-VVGDVLRIR- 483
Query: 391 ETILNGESDEV-FHLSGDCHFKTLSGCEAVDEQNSWENFKHLIANEERYFDCSSKMAATS 449
+ + N S+ + F G+ K L E F + + A +
Sbjct: 484 QILTNLISNAIKFTHEGNVGIK-------------------LQVISEPSFVRDNALNADT 524
Query: 450 ESSEQ-----VKLRVC--VEDTGTGIPFSAQDTIFMPFVQADSSTSRNYGGTGIGLSISK 502
E EQ + +C V DTG GIP +A +F ++QA + +R YGGTG+GL+I K
Sbjct: 525 EEHEQNGLTETSVWICCDVWDTGIGIPENALPCLFKKYMQASADHARKYGGTGLGLAICK 584
Query: 503 CLVELMGGQINFTSRPQVGSTFSFTAAFGMFKKNSVSD 540
LVELMGGQ+ TSR GSTF+F + + + + SD
Sbjct: 585 QLVELMGGQLTVTSRVSEGSTFTFILPYKVGRSDDYSD 622
>AT1G66340.1 | Symbols: ETR1, EIN1, ETR, AtETR1 | Signal
transduction histidine kinase, hybrid-type, ethylene
sensor | chr1:24734698-24737366 FORWARD LENGTH=738
Length = 738
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 164/338 (48%), Gaps = 34/338 (10%)
Query: 257 DLKVR-AEAADVAKSQFLATVSHEIRTPMNGILGMMALLLDTELSSTQRDYAQTAQACGK 315
DL R AE A A++ FLA ++HE+RTPM+ I+ + +LL +TEL+ QR +T
Sbjct: 331 DLARREAETAIRARNDFLAVMNHEMRTPMHAIIALSSLLQETELTPEQRLMVETILKSSN 390
Query: 316 ALITLINEVLDRAKIEAGKLELEAVPFDLRSILDDVLSLFSEKSRHKSLEFTEQGHIFVK 375
L TL+N+VLD +++E G L+LE F+L ++ +VL+L + K L T
Sbjct: 391 LLATLMNDVLDLSRLEDGSLQLELGTFNLHTLFREVLNLIKPIAVVKKLPIT-------- 442
Query: 376 VHLEDNINPVMNGKHETILNGESDEVFHLSGDCHFKTLSGCEAVDEQNSWENFKHLIANE 435
++L ++ + G + ++ + ++ G+ +Q S + ++
Sbjct: 443 LNLAPDLPEFVVGDEKRLMQI----ILNIVGN--------AVKFSKQGSISVTALVTKSD 490
Query: 436 ERYFDCSSKMAATSESSEQVKLRVCVEDTGTGIPFSAQDTIFMPFVQADSSTSRNYGGTG 495
R D + LRV V+D+G GI IF F Q S +R+ GG+G
Sbjct: 491 TRAADF-----FVVPTGSHFYLRVKVKDSGAGINPQDIPKIFTKFAQTQSLATRSSGGSG 545
Query: 496 IGLSISKCLVELMGGQINFTSRPQ-VGSTFSFTAAFGMFKKNSVSDMKKLNLEDLP---- 550
+GL+ISK V LM G I S G T F G+ ++++ S K+ + +P
Sbjct: 546 LGLAISKRFVNLMEGNIWIESDGLGKGCTAIFDVKLGISERSNES--KQSGIPKVPAIPR 603
Query: 551 -SSFRGLKVIVVDGKPVRAAVTRYHLKRLGILVKVANS 587
S+F GLKV+V+D V VT+ L LG V +S
Sbjct: 604 HSNFTGLKVLVMDENGVSRMVTKGLLVHLGCEVTTVSS 641
>AT2G47430.1 | Symbols: CKI1 | Signal transduction histidine kinase
| chr2:19459167-19463122 REVERSE LENGTH=1122
Length = 1122
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 163/379 (43%), Gaps = 61/379 (16%)
Query: 261 RAEAADVAKSQFLATVSHEIRTPMNGILGMMALLLDTELSSTQRDYA-QTAQACGKALIT 319
+AE + KSQ A SH+IR + G+ G++ + D + D C K L+
Sbjct: 388 QAERKSMNKSQAFANASHDIRGALAGMKGLIDICRDGVKPGSDVDTTLNQVNVCAKDLVA 447
Query: 320 LINEVLDRAKIEAGKLELEAVPFDLRSILDDVLSLFSEKSRHKSLEFT---EQGHIFVKV 376
L+N VLD +KIE+GK++L F+L +L+DV+ + + K ++ G +F
Sbjct: 448 LLNSVLDMSKIESGKMQLVEEDFNLSKLLEDVIDFYHPVAMKKGVDVVLDPHDGSVFKFS 507
Query: 377 HLEDNINPVMNGKHETILNGESDEVFHLSGDCHFKTLSGCEAVDEQNS--WENFKHLIAN 434
++ + +G+ + ILN + D H + + +S ++ ++
Sbjct: 508 NVRGD-----SGRLKQILNNLVSNAVKFTVDGHIAVRAWAQRPGSNSSVVLASYPKGVSK 562
Query: 435 EERYFDCSSKMAATSESSE----------QVKLRVCVEDTGTGIPFSAQDTIFMPFVQAD 484
+ C +K +++ +E ++ V+DTG GIP + ++F +VQ
Sbjct: 563 FVKSMFCKNKEESSTYETEISNSIRNNANTMEFVFEVDDTGKGIPMEMRKSVFENYVQV- 621
Query: 485 SSTSRNYGGTGIGLSISKCLVELMGGQINFTSRP--QVGSTFSFTAAFGMFKKNSVSDMK 542
T++ + GTG+GL I + LV LMGG+I T + + G+ F F + VSDMK
Sbjct: 622 RETAQGHQGTGLGLGIVQSLVRLMGGEIRITDKAMGEKGTCFQFNVLLTTLESPPVSDMK 681
Query: 543 ---------------------------KLNLEDLPSSF----------RGLKVIVVDGKP 565
+N+ +L F G +V+++
Sbjct: 682 VRQEIEAGGDYVSTPNLGLTINTSLGGSMNIRNLSPRFNNCLSSSPKQEGSRVVLLLKNE 741
Query: 566 VRAAVTRYHLKRLGILVKV 584
R VT ++K LGI V V
Sbjct: 742 ERRRVTEKYIKNLGIKVTV 760
>AT2G40940.1 | Symbols: ERS1, ERS | ethylene response sensor 1 |
chr2:17084635-17086819 REVERSE LENGTH=613
Length = 613
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 137/281 (48%), Gaps = 26/281 (9%)
Query: 262 AEAADVAKSQFLATVSHEIRTPMNGILGMMALLLDTELSSTQRDYAQTAQACGKALITLI 321
AE A A++ FLA ++HE+RTPM+ I+ + +LLL+TELS QR +T + TLI
Sbjct: 337 AEMAVHARNDFLAVMNHEMRTPMHAIISLSSLLLETELSPEQRVMIETILKSSNLVATLI 396
Query: 322 NEVLDRAKIEAGKLELEAVPFDLRSILDDVLSLFSEKSRHKSLEFTEQGHIFVKVHLEDN 381
++VLD +++E G L LE PF L++I ++V+SL + K L ++ + L
Sbjct: 397 SDVLDLSRLEDGSLLLENEPFSLQAIFEEVISLIKPIASVKKLS----TNLILSADLPTY 452
Query: 382 INPVMNGKHETILNGESDEV-FHLSGDCH-FKTLSGCEAVDEQNSWENFKHLIANEERYF 439
+TILN + V F G ++ E++ E S E F + ++ ++
Sbjct: 453 AIGDEKRLMQTILNIMGNAVKFTKEGYISIIASIMKPESLQELPSPEFFP--VLSDSHFY 510
Query: 440 DCSSKMAATSESSEQVKLRVCVEDTGTGIPFSAQDTIFMPFVQADSSTSRNYGGTGIGLS 499
C V V+DTG GI +F FVQ + T RN+ G G+GL+
Sbjct: 511 LC-----------------VQVKDTGCGIHTQDIPLLFTKFVQPRTGTQRNHSGGGLGLA 553
Query: 500 ISKCLVELMGGQINFTSRP-QVGSTFSFTAAFGMFKKNSVS 539
+ K V LMGG + S + G T SF G+ S S
Sbjct: 554 LCKRFVGLMGGYMWIESEGLEKGCTASFIIRLGICNGPSSS 594
>AT4G18130.1 | Symbols: PHYE | phytochrome E |
chr4:10042312-10045948 REVERSE LENGTH=1112
Length = 1112
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 5/101 (4%)
Query: 273 LATVSHEIRTPMNGILGMMALLLDTELSSTQRDYAQTAQACGKALITLINEVLDRAKIEA 332
L V EI+ P+NGI LL +E+S++QR + +T+ AC K + T+I E D IE
Sbjct: 875 LTYVRQEIKNPLNGIRFAHKLLESSEISASQRQFLETSDACEKQITTII-ESTDLKSIEE 933
Query: 333 GKLELEAVPFDLRSILDDVLS----LFSEKSRHKSLEFTEQ 369
GKL+LE F L +ILD ++S + E++ +E E+
Sbjct: 934 GKLQLETEEFRLENILDTIISQVMIILRERNSQLRVEVAEE 974
>AT1G09570.1 | Symbols: PHYA, FHY2, FRE1, HY8 | phytochrome A |
chr1:3095498-3099216 REVERSE LENGTH=1122
Length = 1122
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 115/294 (39%), Gaps = 59/294 (20%)
Query: 253 HEMQD-LKVR--AEAADVAKSQFLATVSHEIRTPMNGILGMMALLLDTELSSTQRDYAQT 309
HE+Q L V+ AE V + + LA + +IR P++GI+ ++ TEL QR QT
Sbjct: 877 HELQQALHVQRLAERTAVKRLKALAYIKRQIRNPLSGIMFTRKMIEGTELGPEQRRILQT 936
Query: 310 AQACGKALITLINEVLDRAKIEA---GKLELEAVPFDLRSILDDVLSLFSEKSRHKSLEF 366
+ C K L +++LD + +E+ G L+LE F L +L S KS
Sbjct: 937 SALCQKQL----SKILDDSDLESIIEGCLDLEMKEFTLNEVLTASTSQVMMKS------- 985
Query: 367 TEQGHIFVKVHLEDNINPVMNGKHETILNGESDEVFHLSGDCHFKTLSGCEAVDEQNSWE 426
NGK I N +EV TL G +++ Q
Sbjct: 986 --------------------NGKSVRITNETGEEVMS-------DTLYG-DSIRLQQVLA 1017
Query: 427 NFKHLIAN-----EERYFDCSSKMAATSESSEQVKLRVCVEDTGTGIPFSAQDTIFMPFV 481
+F + N + S + S L + + TG GIP + +F
Sbjct: 1018 DFMLMAVNFTPSGGQLTVSASLRKDQLGRSVHLANLEIRLTHTGAGIPEFLLNQMF---- 1073
Query: 482 QADSSTSRNYGGTGIGLSISKCLVELMGGQINFTSRPQVGSTFSFTAAFGMFKK 535
T + G+ L +S+ LV+LM G + + R S+F TA K
Sbjct: 1074 ----GTEEDVSEEGLSLMVSRKLVKLMNGDVQYL-RQAGKSSFIITAELAAANK 1122
>AT1G09570.2 | Symbols: PHYA, FHY2, FRE1, HY8 | phytochrome A |
chr1:3095498-3098892 REVERSE LENGTH=1014
Length = 1014
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 115/294 (39%), Gaps = 59/294 (20%)
Query: 253 HEMQD-LKVR--AEAADVAKSQFLATVSHEIRTPMNGILGMMALLLDTELSSTQRDYAQT 309
HE+Q L V+ AE V + + LA + +IR P++GI+ ++ TEL QR QT
Sbjct: 769 HELQQALHVQRLAERTAVKRLKALAYIKRQIRNPLSGIMFTRKMIEGTELGPEQRRILQT 828
Query: 310 AQACGKALITLINEVLDRAKIEA---GKLELEAVPFDLRSILDDVLSLFSEKSRHKSLEF 366
+ C K L +++LD + +E+ G L+LE F L +L S KS
Sbjct: 829 SALCQKQL----SKILDDSDLESIIEGCLDLEMKEFTLNEVLTASTSQVMMKS------- 877
Query: 367 TEQGHIFVKVHLEDNINPVMNGKHETILNGESDEVFHLSGDCHFKTLSGCEAVDEQNSWE 426
NGK I N +EV TL G +++ Q
Sbjct: 878 --------------------NGKSVRITNETGEEVMS-------DTLYG-DSIRLQQVLA 909
Query: 427 NFKHLIAN-----EERYFDCSSKMAATSESSEQVKLRVCVEDTGTGIPFSAQDTIFMPFV 481
+F + N + S + S L + + TG GIP + +F
Sbjct: 910 DFMLMAVNFTPSGGQLTVSASLRKDQLGRSVHLANLEIRLTHTGAGIPEFLLNQMF---- 965
Query: 482 QADSSTSRNYGGTGIGLSISKCLVELMGGQINFTSRPQVGSTFSFTAAFGMFKK 535
T + G+ L +S+ LV+LM G + + R S+F TA K
Sbjct: 966 ----GTEEDVSEEGLSLMVSRKLVKLMNGDVQYL-RQAGKSSFIITAELAAANK 1014