Miyakogusa Predicted Gene
- Lj1g3v5062780.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v5062780.1 Non Chatacterized Hit- tr|I1JJD2|I1JJD2_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,94.24,0,Transket_pyr,Transketolase-like, pyrimidine-binding
domain; PYRUVATE DEHYDROGENASE E1 COMPONENT, BET,CUFF.34787.1
(205 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G50850.1 | Symbols: MAB1 | Transketolase family protein | chr... 356 7e-99
AT1G30120.1 | Symbols: PDH-E1 BETA | pyruvate dehydrogenase E1 b... 182 1e-46
AT2G34590.1 | Symbols: | Transketolase family protein | chr2:14... 180 5e-46
AT3G13450.1 | Symbols: DIN4 | Transketolase family protein | chr... 140 7e-34
AT1G55510.1 | Symbols: BCDH BETA1 | branched-chain alpha-keto ac... 138 3e-33
>AT5G50850.1 | Symbols: MAB1 | Transketolase family protein |
chr5:20689671-20692976 FORWARD LENGTH=363
Length = 363
Score = 356 bits (913), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 171/203 (84%), Positives = 185/203 (91%), Gaps = 7/203 (3%)
Query: 3 ASISRNRFYSQTIRPAFSSLRQFSSVAKEMTVREALNSALDEEMSADPKVFLMGEEVGEY 62
+++ R RF A S R +++ AKEMTVR+ALNSA+DEEMSADPKVF+MGEEVG+Y
Sbjct: 14 STLRRTRF-------ALVSARSYAAGAKEMTVRDALNSAIDEEMSADPKVFVMGEEVGQY 66
Query: 63 QGAYKITKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLRPVVEFMTFNFSMQAIDHI 122
QGAYKITKGLLEKYGPERV DTPITEAGFTGIGVGAAY GL+PVVEFMTFNFSMQAIDHI
Sbjct: 67 QGAYKITKGLLEKYGPERVYDTPITEAGFTGIGVGAAYAGLKPVVEFMTFNFSMQAIDHI 126
Query: 123 INSAAKSNYMSAGQINVPIVFRGPNGAAAGVGAQHSQCYASWYGSCPGLKVLSPYSSEDA 182
INSAAKSNYMSAGQINVPIVFRGPNGAAAGVGAQHSQCYA+WY S PGLKVL+PYS+EDA
Sbjct: 127 INSAAKSNYMSAGQINVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLAPYSAEDA 186
Query: 183 RGLLKAAIRDPDPVVFLENELLY 205
RGLLKAAIRDPDPVVFLENELLY
Sbjct: 187 RGLLKAAIRDPDPVVFLENELLY 209
>AT1G30120.1 | Symbols: PDH-E1 BETA | pyruvate dehydrogenase E1 beta
| chr1:10584350-10586477 REVERSE LENGTH=406
Length = 406
Score = 182 bits (463), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/198 (44%), Positives = 129/198 (65%), Gaps = 3/198 (1%)
Query: 11 YSQTIRPAFSSLRQF---SSVAKEMTVREALNSALDEEMSADPKVFLMGEEVGEYQGAYK 67
+SQ + P + ++ +S E+ + EAL L+EEM DP V +MGE+VG Y G+YK
Sbjct: 62 HSQKLIPNAVATKEADTSASTGHELLLFEALQEGLEEEMDRDPHVCVMGEDVGHYGGSYK 121
Query: 68 ITKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLRPVVEFMTFNFSMQAIDHIINSAA 127
+TKGL +K+G RVLDTPI E FTG+G+GAA GLRPV+E M F + A + I N+
Sbjct: 122 VTKGLADKFGDLRVLDTPICENAFTGMGIGAAMTGLRPVIEGMNMGFLLLAFNQISNNCG 181
Query: 128 KSNYMSAGQINVPIVFRGPNGAAAGVGAQHSQCYASWYGSCPGLKVLSPYSSEDARGLLK 187
+Y S GQ +P+V RGP G +GA+HSQ S++ S PG+++++ + +A+GL+K
Sbjct: 182 MLHYTSGGQFTIPVVIRGPGGVGRQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMK 241
Query: 188 AAIRDPDPVVFLENELLY 205
AAIR +PV+ E+ LLY
Sbjct: 242 AAIRSENPVILFEHVLLY 259
>AT2G34590.1 | Symbols: | Transketolase family protein |
chr2:14568956-14570844 REVERSE LENGTH=406
Length = 406
Score = 180 bits (457), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 86/180 (47%), Positives = 120/180 (66%)
Query: 26 SSVAKEMTVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKITKGLLEKYGPERVLDTP 85
S E+ + EAL L+EEM DP V +MGE+VG Y G+YK+TKGL +K+G RVLDTP
Sbjct: 80 SKPGHELLLFEALQEGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKFGDLRVLDTP 139
Query: 86 ITEAGFTGIGVGAAYYGLRPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQINVPIVFRG 145
I E FTG+G+GAA GLRPV+E M F + A + I N+ +Y S GQ +P+V RG
Sbjct: 140 ICENAFTGMGIGAAMTGLRPVIEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTIPVVIRG 199
Query: 146 PNGAAAGVGAQHSQCYASWYGSCPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLY 205
P G +GA+HSQ S++ S PG+++++ + +A+GL+KAAIR +PV+ E+ LLY
Sbjct: 200 PGGVGRQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY 259
>AT3G13450.1 | Symbols: DIN4 | Transketolase family protein |
chr3:4382340-4384295 REVERSE LENGTH=358
Length = 358
Score = 140 bits (352), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 106/188 (56%), Gaps = 2/188 (1%)
Query: 19 FSSLRQFSSVAKEMTVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKITKGLLEKYGP 78
S++ S K M + A+N AL + DP+ ++ GE+VG + G ++ T GL E++G
Sbjct: 25 LSTVENVSESGKSMNLYSAINQALHIALETDPRSYVFGEDVG-FGGVFRCTTGLAERFGK 83
Query: 79 ERVLDTPITEAGFTGIGVGAAYYGLRPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQIN 138
RV +TP+ E G G G+G A G R + E ++ A D I+N AAK Y S Q N
Sbjct: 84 SRVFNTPLCEQGIVGFGIGLAAMGNRVIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFN 143
Query: 139 V-PIVFRGPNGAAAGVGAQHSQCYASWYGSCPGLKVLSPYSSEDARGLLKAAIRDPDPVV 197
+ R P GA G HSQ +++ PG+KV+ P S +A+GLL ++IRDP+PVV
Sbjct: 144 CGGLTIRAPYGAVGHGGHYHSQSPEAFFCHVPGIKVVIPRSPREAKGLLLSSIRDPNPVV 203
Query: 198 FLENELLY 205
F E + LY
Sbjct: 204 FFEPKWLY 211
>AT1G55510.1 | Symbols: BCDH BETA1 | branched-chain alpha-keto acid
decarboxylase E1 beta subunit | chr1:20723482-20725505
FORWARD LENGTH=352
Length = 352
Score = 138 bits (347), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 104/184 (56%), Gaps = 2/184 (1%)
Query: 23 RQFSSVAKEMTVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKITKGLLEKYGPERVL 82
R + K + + A+N AL + DP+ ++ GE+VG + G ++ T GL E++G RV
Sbjct: 23 RVSTETGKPLNLYSAINQALHIALDTDPRSYVFGEDVG-FGGVFRCTTGLAERFGKNRVF 81
Query: 83 DTPITEAGFTGIGVGAAYYGLRPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQINV-PI 141
+TP+ E G G G+G A G R +VE ++ A D I+N AAK Y S Q N +
Sbjct: 82 NTPLCEQGIVGFGIGLAAMGNRAIVEIQFADYIYPAFDQIVNEAAKFRYRSGNQFNCGGL 141
Query: 142 VFRGPNGAAAGVGAQHSQCYASWYGSCPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLEN 201
R P GA G HSQ +++ PG+KV+ P S +A+GLL + IRDP+PVVF E
Sbjct: 142 TIRAPYGAVGHGGHYHSQSPEAFFCHVPGIKVVIPRSPREAKGLLLSCIRDPNPVVFFEP 201
Query: 202 ELLY 205
+ LY
Sbjct: 202 KWLY 205