Miyakogusa Predicted Gene

Lj1g3v5062690.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v5062690.3 Non Chatacterized Hit- tr|A5ADJ3|A5ADJ3_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,38.26,4e-18,coiled-coil,NULL; seg,NULL,CUFF.34031.3
         (551 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G53800.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...   379   e-105
AT1G53800.2 | Symbols:  | unknown protein; BEST Arabidopsis thal...   378   e-105
AT1G53250.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...   103   3e-22

>AT1G53800.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT1G53250.1); Has 1136 Blast hits to 882 proteins
           in 242 species: Archae - 2; Bacteria - 216; Metazoa -
           257; Fungi - 77; Plants - 87; Viruses - 4; Other
           Eukaryotes - 493 (source: NCBI BLink). |
           chr1:20081888-20084320 FORWARD LENGTH=568
          Length = 568

 Score =  379 bits (972), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 237/544 (43%), Positives = 323/544 (59%), Gaps = 32/544 (5%)

Query: 25  WKSMDFDKLQKENFNVGRLNLNKFPFLIKAVATCEPDTLLPKHDK--CDLLPNPHSSLDF 82
           W+   F K  K  F  G  ++ +   LI AVAT E      K ++    L      S + 
Sbjct: 35  WRQSCFSKNLK--FYTGHSHVRRGKVLITAVATLETKYPAQKENERSSSLSSASSKSSNG 92

Query: 83  SDDEPEVALQDCEKLRRMRISKANKGNMPWNKGRKHSAETIQKIKERTRLAMQNPKVKLK 142
           S D+ E  + D EKLRRMRISKAN+GN PWNKGRKHS ET+QKI+ERT++AMQ+PK+K+K
Sbjct: 93  SADDGEEQVDDREKLRRMRISKANRGNTPWNKGRKHSPETLQKIRERTKIAMQDPKIKMK 152

Query: 143 LKNLGHAQTTETKQKIGAGVKLRWERRRGMKVVQETCCFEWQNLIAEASRQGYVGQEELQ 202
           L NLGHAQ  ET+ KIG GV++RW RR+  + VQETC FEWQNL+AEA++QGY  +EELQ
Sbjct: 153 LANLGHAQNKETRMKIGEGVRMRWARRKERRKVQETCHFEWQNLLAEAAKQGYTDEEELQ 212

Query: 203 WNSYEILDEQLKQEWLVSIDQRKRMPGAPGSKRAPKSPEQRRKIAEAIAAKWADPEYRDR 262
           W+SY ILD+Q + EWL S++QRK + GA  ++RAPKSPEQRR+IAEAIAAKWADP YR+R
Sbjct: 213 WDSYNILDQQNQLEWLESVEQRKAIKGAKSNRRAPKSPEQRRRIAEAIAAKWADPSYRER 272

Query: 263 VCSALAKYHGIEAGAERKPRRRPSDVARPAK----RKTTTDSGDRLKSGPKILNPIRLRK 318
           VCS LAKYHGI  G ER+ RR  SD A P K    +K+T DS    +S  ++   +++RK
Sbjct: 273 VCSGLAKYHGIPVGVERRRRRPRSD-AEPRKKTPTKKSTRDSEFERQSQVQV---VKVRK 328

Query: 319 SKSPAYIDPLVNSKLEMIKNIRAQRASEETRQTHXXXXXXXXXXXXXXXXXXXXXXXTKS 378
            K+PAY DPL +SKLEMIK+IRA+R +EE+++                          KS
Sbjct: 329 RKTPAYKDPLASSKLEMIKSIRAKRVAEESKKMDAVERARLLISEAEKAAKVLEIAALKS 388

Query: 379 SIAQSSLIETRKLIAEAIQTLESIDTQGVT---ESNVPSVGLDEISEENGSAFKVLDQSQ 435
            +AQ+SL+E++KLIAEA Q ++S++ + +    +   P +   + ++         DQ +
Sbjct: 389 PVAQASLLESKKLIAEATQLIKSLEMRQIASDEDGTYPFLLSPQPNDSESETKDTNDQER 448

Query: 436 MAQVNGHSTLSSSDYKF-----SEDFGEFPLE---KPVIGDQELHLTNGC-ASLPYTLIS 486
             ++NG  TL  +         S D   F +E      + D E + + G    +   ++ 
Sbjct: 449 PGEINGTHTLQINGESLHMNMRSNDLPTFVIEGTTNQFVSDMESNTSQGGREDIKLGIVG 508

Query: 487 QMNES--SPSNEQREAEQDHCSERKTDPSPTVMGTQSLEDGTLSRSPTVVTRKWVRGRLV 544
           Q N +   P  E   A     S  +  P P   G   +++   S     VT+KWVRGRLV
Sbjct: 509 QPNGTRVHPPAESNGA----ISLAENHPLPN--GYHGIDEKAASLESGNVTKKWVRGRLV 562

Query: 545 EVAE 548
           EV E
Sbjct: 563 EVTE 566


>AT1G53800.2 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT1G53250.1); Has 35333 Blast hits to 34131
           proteins in 2444 species: Archae - 798; Bacteria -
           22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses
           - 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
           chr1:20081888-20084320 FORWARD LENGTH=572
          Length = 572

 Score =  378 bits (970), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 237/544 (43%), Positives = 323/544 (59%), Gaps = 32/544 (5%)

Query: 25  WKSMDFDKLQKENFNVGRLNLNKFPFLIKAVATCEPDTLLPKHDK--CDLLPNPHSSLDF 82
           W+   F K  K  F  G  ++ +   LI AVAT E      K ++    L      S + 
Sbjct: 39  WRQSCFSKNLK--FYTGHSHVRRGKVLITAVATLETKYPAQKENERSSSLSSASSKSSNG 96

Query: 83  SDDEPEVALQDCEKLRRMRISKANKGNMPWNKGRKHSAETIQKIKERTRLAMQNPKVKLK 142
           S D+ E  + D EKLRRMRISKAN+GN PWNKGRKHS ET+QKI+ERT++AMQ+PK+K+K
Sbjct: 97  SADDGEEQVDDREKLRRMRISKANRGNTPWNKGRKHSPETLQKIRERTKIAMQDPKIKMK 156

Query: 143 LKNLGHAQTTETKQKIGAGVKLRWERRRGMKVVQETCCFEWQNLIAEASRQGYVGQEELQ 202
           L NLGHAQ  ET+ KIG GV++RW RR+  + VQETC FEWQNL+AEA++QGY  +EELQ
Sbjct: 157 LANLGHAQNKETRMKIGEGVRMRWARRKERRKVQETCHFEWQNLLAEAAKQGYTDEEELQ 216

Query: 203 WNSYEILDEQLKQEWLVSIDQRKRMPGAPGSKRAPKSPEQRRKIAEAIAAKWADPEYRDR 262
           W+SY ILD+Q + EWL S++QRK + GA  ++RAPKSPEQRR+IAEAIAAKWADP YR+R
Sbjct: 217 WDSYNILDQQNQLEWLESVEQRKAIKGAKSNRRAPKSPEQRRRIAEAIAAKWADPSYRER 276

Query: 263 VCSALAKYHGIEAGAERKPRRRPSDVARPAK----RKTTTDSGDRLKSGPKILNPIRLRK 318
           VCS LAKYHGI  G ER+ RR  SD A P K    +K+T DS    +S  ++   +++RK
Sbjct: 277 VCSGLAKYHGIPVGVERRRRRPRSD-AEPRKKTPTKKSTRDSEFERQSQVQV---VKVRK 332

Query: 319 SKSPAYIDPLVNSKLEMIKNIRAQRASEETRQTHXXXXXXXXXXXXXXXXXXXXXXXTKS 378
            K+PAY DPL +SKLEMIK+IRA+R +EE+++                          KS
Sbjct: 333 RKTPAYKDPLASSKLEMIKSIRAKRVAEESKKMDAVERARLLISEAEKAAKVLEIAALKS 392

Query: 379 SIAQSSLIETRKLIAEAIQTLESIDTQGVT---ESNVPSVGLDEISEENGSAFKVLDQSQ 435
            +AQ+SL+E++KLIAEA Q ++S++ + +    +   P +   + ++         DQ +
Sbjct: 393 PVAQASLLESKKLIAEATQLIKSLEMRQIASDEDGTYPFLLSPQPNDSESETKDTNDQER 452

Query: 436 MAQVNGHSTLSSSDYKF-----SEDFGEFPLE---KPVIGDQELHLTNGC-ASLPYTLIS 486
             ++NG  TL  +         S D   F +E      + D E + + G    +   ++ 
Sbjct: 453 PGEINGTHTLQINGESLHMNMRSNDLPTFVIEGTTNQFVSDMESNTSQGGREDIKLGIVG 512

Query: 487 QMNES--SPSNEQREAEQDHCSERKTDPSPTVMGTQSLEDGTLSRSPTVVTRKWVRGRLV 544
           Q N +   P  E   A     S  +  P P   G   +++   S     VT+KWVRGRLV
Sbjct: 513 QPNGTRVHPPAESNGA----ISLAENHPLPN--GYHGIDEKAASLESGNVTKKWVRGRLV 566

Query: 545 EVAE 548
           EV E
Sbjct: 567 EVTE 570


>AT1G53250.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT1G53800.1); Has 11909 Blast hits to 7704
           proteins in 757 species: Archae - 51; Bacteria - 1338;
           Metazoa - 4550; Fungi - 987; Plants - 464; Viruses - 24;
           Other Eukaryotes - 4495 (source: NCBI BLink). |
           chr1:19857468-19859156 FORWARD LENGTH=371
          Length = 371

 Score =  103 bits (257), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 57/132 (43%), Positives = 81/132 (61%)

Query: 95  EKLRRMRISKANKGNMPWNKGRKHSAETIQKIKERTRLAMQNPKVKLKLKNLGHAQTTET 154
           E+ RR +I  ANKG +PWNKGRKHS +T ++IK+RT  A+ NPKV+ K+ +     + ET
Sbjct: 102 EEERRRKIGLANKGKVPWNKGRKHSEDTRRRIKQRTIEALTNPKVRKKMSDHQQPHSNET 161

Query: 155 KQKIGAGVKLRWERRRGMKVVQETCCFEWQNLIAEASRQGYVGQEELQWNSYEILDEQLK 214
           K+KI A VK  W  R   K ++E     W   IAEA+R+G  G+ EL W+SYE + +   
Sbjct: 162 KEKIRASVKQVWAERSRSKRLKEKFMSSWSENIAEAARKGGSGEAELDWDSYEKIKQDFS 221

Query: 215 QEWLVSIDQRKR 226
            E L   +++ R
Sbjct: 222 SEQLQLAEEKAR 233