Miyakogusa Predicted Gene

Lj1g3v5062690.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v5062690.2 Non Chatacterized Hit- tr|D8R6N5|D8R6N5_SELML
Putative uncharacterized protein OS=Selaginella
moelle,32.62,0.000000000000001,seg,NULL; coiled-coil,NULL,CUFF.34031.2
         (380 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G53800.2 | Symbols:  | unknown protein; BEST Arabidopsis thal...   250   1e-66
AT1G53800.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...   249   2e-66

>AT1G53800.2 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT1G53250.1); Has 35333 Blast hits to 34131
           proteins in 2444 species: Archae - 798; Bacteria -
           22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses
           - 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
           chr1:20081888-20084320 FORWARD LENGTH=572
          Length = 572

 Score =  250 bits (638), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 161/392 (41%), Positives = 225/392 (57%), Gaps = 28/392 (7%)

Query: 4   VQETCCFEWQNLIAEASRQGYVGQEELQWNSYEILDEQLKQEWLVSIDQRKRMPGAPGSK 63
           VQETC FEWQNL+AEA++QGY  +EELQW+SY ILD+Q + EWL S++QRK + GA  ++
Sbjct: 189 VQETCHFEWQNLLAEAAKQGYTDEEELQWDSYNILDQQNQLEWLESVEQRKAIKGAKSNR 248

Query: 64  RAPKSPEQRRKIAEAIAAKWADPEYRDRVCSALAKYHGIEAGAERKPRRRPSDVARPAK- 122
           RAPKSPEQRR+IAEAIAAKWADP YR+RVCS LAKYHGI  G ER+ RR  SD A P K 
Sbjct: 249 RAPKSPEQRRRIAEAIAAKWADPSYRERVCSGLAKYHGIPVGVERRRRRPRSD-AEPRKK 307

Query: 123 ---RKTTTDSGDRLKSGPKILNPIRLRKSKSPAYIDPLVNSKLEMIKNIRAQRASEETRQ 179
              +K+T DS    +S  ++   +++RK K+PAY DPL +SKLEMIK+IRA+R +EE+++
Sbjct: 308 TPTKKSTRDSEFERQSQVQV---VKVRKRKTPAYKDPLASSKLEMIKSIRAKRVAEESKK 364

Query: 180 THXXXXXXXXXXXXXXXXXXXXXXXTKSSIAQSSLIETRKLIAEAIQTLESIDTQGVT-- 237
                                     KS +AQ+SL+E++KLIAEA Q ++S++ + +   
Sbjct: 365 MDAVERARLLISEAEKAAKVLEIAALKSPVAQASLLESKKLIAEATQLIKSLEMRQIASD 424

Query: 238 -ESNVPSVGLDEISEENGSAFKVLDQSQMAQVNGHSTLSSSDYKF-----SEDFGEFPLE 291
            +   P +   + ++         DQ +  ++NG  TL  +         S D   F +E
Sbjct: 425 EDGTYPFLLSPQPNDSESETKDTNDQERPGEINGTHTLQINGESLHMNMRSNDLPTFVIE 484

Query: 292 ---KPVIGDQELHLTNGC-ASLPYTLISQMNES--SPSNEQREAEQDHCSERKTDPSPTV 345
                 + D E + + G    +   ++ Q N +   P  E   A     S  +  P P  
Sbjct: 485 GTTNQFVSDMESNTSQGGREDIKLGIVGQPNGTRVHPPAESNGA----ISLAENHPLPN- 539

Query: 346 MGTQSLEDGTLSRSPTVVTRKWVRGRLVEVAE 377
            G   +++   S     VT+KWVRGRLVEV E
Sbjct: 540 -GYHGIDEKAASLESGNVTKKWVRGRLVEVTE 570


>AT1G53800.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT1G53250.1); Has 1136 Blast hits to 882 proteins
           in 242 species: Archae - 2; Bacteria - 216; Metazoa -
           257; Fungi - 77; Plants - 87; Viruses - 4; Other
           Eukaryotes - 493 (source: NCBI BLink). |
           chr1:20081888-20084320 FORWARD LENGTH=568
          Length = 568

 Score =  249 bits (637), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 161/392 (41%), Positives = 225/392 (57%), Gaps = 28/392 (7%)

Query: 4   VQETCCFEWQNLIAEASRQGYVGQEELQWNSYEILDEQLKQEWLVSIDQRKRMPGAPGSK 63
           VQETC FEWQNL+AEA++QGY  +EELQW+SY ILD+Q + EWL S++QRK + GA  ++
Sbjct: 185 VQETCHFEWQNLLAEAAKQGYTDEEELQWDSYNILDQQNQLEWLESVEQRKAIKGAKSNR 244

Query: 64  RAPKSPEQRRKIAEAIAAKWADPEYRDRVCSALAKYHGIEAGAERKPRRRPSDVARPAK- 122
           RAPKSPEQRR+IAEAIAAKWADP YR+RVCS LAKYHGI  G ER+ RR  SD A P K 
Sbjct: 245 RAPKSPEQRRRIAEAIAAKWADPSYRERVCSGLAKYHGIPVGVERRRRRPRSD-AEPRKK 303

Query: 123 ---RKTTTDSGDRLKSGPKILNPIRLRKSKSPAYIDPLVNSKLEMIKNIRAQRASEETRQ 179
              +K+T DS    +S  ++   +++RK K+PAY DPL +SKLEMIK+IRA+R +EE+++
Sbjct: 304 TPTKKSTRDSEFERQSQVQV---VKVRKRKTPAYKDPLASSKLEMIKSIRAKRVAEESKK 360

Query: 180 THXXXXXXXXXXXXXXXXXXXXXXXTKSSIAQSSLIETRKLIAEAIQTLESIDTQGVT-- 237
                                     KS +AQ+SL+E++KLIAEA Q ++S++ + +   
Sbjct: 361 MDAVERARLLISEAEKAAKVLEIAALKSPVAQASLLESKKLIAEATQLIKSLEMRQIASD 420

Query: 238 -ESNVPSVGLDEISEENGSAFKVLDQSQMAQVNGHSTLSSSDYKF-----SEDFGEFPLE 291
            +   P +   + ++         DQ +  ++NG  TL  +         S D   F +E
Sbjct: 421 EDGTYPFLLSPQPNDSESETKDTNDQERPGEINGTHTLQINGESLHMNMRSNDLPTFVIE 480

Query: 292 ---KPVIGDQELHLTNGC-ASLPYTLISQMNES--SPSNEQREAEQDHCSERKTDPSPTV 345
                 + D E + + G    +   ++ Q N +   P  E   A     S  +  P P  
Sbjct: 481 GTTNQFVSDMESNTSQGGREDIKLGIVGQPNGTRVHPPAESNGA----ISLAENHPLPN- 535

Query: 346 MGTQSLEDGTLSRSPTVVTRKWVRGRLVEVAE 377
            G   +++   S     VT+KWVRGRLVEV E
Sbjct: 536 -GYHGIDEKAASLESGNVTKKWVRGRLVEVTE 566