Miyakogusa Predicted Gene

Lj1g3v5038190.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v5038190.3 Non Chatacterized Hit- tr|Q55DE9|Q55DE9_DICDI
Putative uncharacterized protein OS=Dictyostelium
disc,29.63,0.00000000000001,GHMP Kinase, C-terminal domain,NULL; no
description,NULL; GHMP_kinases_C,GHMP kinase, C-terminal
dom,CUFF.34013.3
         (171 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G01220.1 | Symbols: FKGP, AtFKGP | L-fucokinase/GDP-L-fucose ...   214   2e-56

>AT1G01220.1 | Symbols: FKGP, AtFKGP | L-fucokinase/GDP-L-fucose
            pyrophosphorylase | chr1:91750-95552 FORWARD LENGTH=1055
          Length = 1055

 Score =  214 bits (546), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 103/150 (68%), Positives = 120/150 (80%)

Query: 17   VPLLASPELISELQQRLLVVFTGQVRLAKKVLQKVVTRYLRRDNLLVSSIKRLVELAKIG 76
            VPLLASP+LISEL+QRLLVVFTGQVRLA +VL KVVTRYL+RDNLL+SSIKRL ELAK G
Sbjct: 902  VPLLASPQLISELEQRLLVVFTGQVRLAHQVLHKVVTRYLQRDNLLISSIKRLTELAKSG 961

Query: 77   REALMNCEIDEFGEIMLEAWRLHQELDPFCSNESVDRLFSFASPYCCGYKLVXXXXXXXX 136
            REALMNCE+DE G+IM EAWRLHQELDP+CSNE VD+LF F+ PY  G+KLV        
Sbjct: 962  REALMNCEVDEVGDIMSEAWRLHQELDPYCSNEFVDKLFEFSQPYSSGFKLVGAGGGGFS 1021

Query: 137  XXXXRDKQLAKGLRHRLEDEKHFEVKIYDW 166
                +D + AK LR RLE+   F+VK+Y+W
Sbjct: 1022 LILAKDAEKAKELRQRLEEHAEFDVKVYNW 1051