Miyakogusa Predicted Gene

Lj1g3v5038190.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v5038190.2 tr|C6JAN9|C6JAN9_9FIRM L-fucokinase
domain-containing protein (Fragment) OS=Ruminococcus sp.
5_1_39B,24.77,0.0000000000001,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; Fucokinase,L-fucokinase; seg,NULL,CUFF.34013.2
         (407 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G01220.1 | Symbols: FKGP, AtFKGP | L-fucokinase/GDP-L-fucose ...   470   e-133

>AT1G01220.1 | Symbols: FKGP, AtFKGP | L-fucokinase/GDP-L-fucose
           pyrophosphorylase | chr1:91750-95552 FORWARD LENGTH=1055
          Length = 1055

 Score =  470 bits (1209), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 222/316 (70%), Positives = 257/316 (81%)

Query: 83  KHILLFHAGGDSKRVPWANPMGKVFLPLPYLASDEPDGPVPLLFDHILAIASCARQAFGD 142
           KH+L+ HAGGDSKRVPWANPMGKVFLPLPYLA+D+PDGPVPLLFDHILAIASCARQAF D
Sbjct: 124 KHVLMLHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAIASCARQAFQD 183

Query: 143 QGGMLTMTGDVLPCFDASVMILPNDTSCIITVPITLDVASNHGVIVAAETERSTKSYAVS 202
           QGG+  MTGDVLPCFDA  M LP D + I+TVPITLD+ASNHGVIV +++E   +SY VS
Sbjct: 184 QGGLFIMTGDVLPCFDAFKMTLPEDAASIVTVPITLDIASNHGVIVTSKSESLAESYTVS 243

Query: 203 LVDNLLQKPTLEELVENKAVLADGRTLLDTGIIAVRGKAWLELVTLACSCQPMISELLES 262
           LV++LLQKPT+E+LV+  A+L DGRTLLDTGII+ RG+AW +LV L CSCQPMI EL+ S
Sbjct: 244 LVNDLLQKPTVEDLVKKDAILHDGRTLLDTGIISARGRAWSDLVALGCSCQPMILELIGS 303

Query: 263 KKEMSLYEDLVAAWVPAKHEWLRKRPLGEELVNKLGKHKMFSYCAYDLLFLHFGTSSEVL 322
           KKEMSLYEDLVAAWVP++H+WLR RPLGE LVN LG+ KM+SYC YDL FLHFGTSSEVL
Sbjct: 304 KKEMSLYEDLVAAWVPSRHDWLRTRPLGELLVNSLGRQKMYSYCTYDLQFLHFGTSSEVL 363

Query: 323 DHLSGAGSELVGRRHMCXXXXXXXXXXXXXXXXXXXEIAPGVSIGEDSLIYDSSISAGIH 382
           DHLSG  S +VGRRH+C                   EIAPGVSIGEDSLIYDS++S  + 
Sbjct: 364 DHLSGDASGIVGRRHLCSIPATTVSDIAASSVILSSEIAPGVSIGEDSLIYDSTVSGAVQ 423

Query: 383 IGSLCIVVGVNISLDD 398
           IGS  IVVG++I  +D
Sbjct: 424 IGSQSIVVGIHIPSED 439