Miyakogusa Predicted Gene

Lj1g3v5038150.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v5038150.2 Non Chatacterized Hit- tr|C6TJT9|C6TJT9_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2
S,52.17,3e-17,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; LRAT,LRAT-like domain,CUFF.33979.2
         (258 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G01225.1 | Symbols:  | NC domain-containing protein-related |...   353   9e-98
AT4G00905.1 | Symbols:  | NC domain-containing protein-related |...   342   2e-94
AT5G06370.1 | Symbols:  | NC domain-containing protein-related |...   230   6e-61
AT3G02700.1 | Symbols:  | NC domain-containing protein-related |...   221   3e-58
AT5G16360.1 | Symbols:  | NC domain-containing protein-related |...   187   4e-48
AT5G16330.1 | Symbols:  | NC domain-containing protein-related |...   179   2e-45

>AT1G01225.1 | Symbols:  | NC domain-containing protein-related |
           chr1:96064-97242 FORWARD LENGTH=260
          Length = 260

 Score =  353 bits (905), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 177/243 (72%), Positives = 197/243 (81%), Gaps = 1/243 (0%)

Query: 1   MGLLSHRVERHEMKPGDHIYTYRAIFTYSHHGVFVGGSKVVHFRPERNFKSTTETSSNLD 60
           MGLL++++ER E+KPGDHIYTYRAIF YSHHG+FVGGSKVVHFRPE N    + TSS   
Sbjct: 1   MGLLTNKIEREELKPGDHIYTYRAIFAYSHHGIFVGGSKVVHFRPEHN-PMDSSTSSISS 59

Query: 61  DSTSTPCEIFPDCGFRQPNSGVVLSCLDCFLRNGSLYCFEYGVSPTAFFTKVRGGTCTTA 120
            S+   C IFPDCGFRQP+SGVVLSCLDCFL+NGSLYCFEYGVSP+ F TKVRGGTCTTA
Sbjct: 60  SSSEDICSIFPDCGFRQPDSGVVLSCLDCFLKNGSLYCFEYGVSPSVFLTKVRGGTCTTA 119

Query: 121 SSDPPETVIHRAMYLLQNGFGNYNVFQNNCEDFALYCKTGLLILDKQGVGRSGQASSIVG 180
            SD  ++VIHRAMYLLQNGFGNY++F+NNCEDFALYCKTGLLI+DK GVGRSGQASSIVG
Sbjct: 120 QSDTTDSVIHRAMYLLQNGFGNYDIFKNNCEDFALYCKTGLLIMDKLGVGRSGQASSIVG 179

Query: 181 XXXXXXXXXXXXXXXXXXVGVATVTAGMYCMSRYATDIGVRSDVIKVGVEDLAVNLGWTC 240
                             +GVATVTAGMYCMSRYATDIGVRSDVIKV VEDLA+NL    
Sbjct: 180 APLAALLSSPFKLLIPSPIGVATVTAGMYCMSRYATDIGVRSDVIKVSVEDLALNLDVKT 239

Query: 241 PEE 243
            E+
Sbjct: 240 IEQ 242


>AT4G00905.1 | Symbols:  | NC domain-containing protein-related |
           chr4:387865-389060 FORWARD LENGTH=263
          Length = 263

 Score =  342 bits (876), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 171/260 (65%), Positives = 199/260 (76%), Gaps = 9/260 (3%)

Query: 1   MGLLSHRVERHEMKPGDHIYTYRAIFTYSHHGVFVGGSKVVHFRPERNFKSTT------- 53
           MG+L+++VER E+KPGDHIYTYRA+F YSHHGVFVGG KVVHF+PE +  S T       
Sbjct: 1   MGVLTNKVERDELKPGDHIYTYRAVFAYSHHGVFVGGCKVVHFKPEHSLISPTLASSSSS 60

Query: 54  --ETSSNLDDSTSTPCEIFPDCGFRQPNSGVVLSCLDCFLRNGSLYCFEYGVSPTAFFTK 111
              + S ++DS+  PC  +PDCG+++P SGVVLSCLDCFL+ GSLY F+YGVS + F T+
Sbjct: 61  SSSSVSEVNDSSEAPCPTYPDCGYKRPKSGVVLSCLDCFLKKGSLYRFDYGVSSSIFLTR 120

Query: 112 VRGGTCTTASSDPPETVIHRAMYLLQNGFGNYNVFQNNCEDFALYCKTGLLILDKQGVGR 171
            RGGTCTTA SDP +TVIHRAM+LLQNGFGNYNVFQNNCEDFALYCKTGLLILDK GVGR
Sbjct: 121 FRGGTCTTAPSDPLQTVIHRAMHLLQNGFGNYNVFQNNCEDFALYCKTGLLILDKNGVGR 180

Query: 172 SGQASSIVGXXXXXXXXXXXXXXXXXXVGVATVTAGMYCMSRYATDIGVRSDVIKVGVED 231
           SGQASSI+G                  VGVATVTAGMYCMSRYATDIGVR+DVIKV VED
Sbjct: 181 SGQASSIIGAPLAALLSSPLTLLIPNPVGVATVTAGMYCMSRYATDIGVRNDVIKVPVED 240

Query: 232 LAVNLGWTCPEEEIAAEDET 251
           LA+NLG    + +  A D +
Sbjct: 241 LALNLGLKPLKRKRKACDTS 260


>AT5G06370.1 | Symbols:  | NC domain-containing protein-related |
           chr5:1947299-1948432 REVERSE LENGTH=259
          Length = 259

 Score =  230 bits (587), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 118/239 (49%), Positives = 151/239 (63%), Gaps = 4/239 (1%)

Query: 1   MGLLSHRVERHEMKPGDHIYTYRAIFTYSHHGVFVGGSKVVHFRPERNFKSTTETSSNLD 60
           MGLLS+R++R  +KPGDHIY++R  + Y+HHG++VG  +V+HF   R  +  T T  +L 
Sbjct: 1   MGLLSNRIDRSSLKPGDHIYSWRTAYIYAHHGIYVGDDRVIHFT-RRGQEVGTGTVLDLI 59

Query: 61  DSTSTPCEIF---PDCGFRQPNSGVVLSCLDCFLRNGSLYCFEYGVSPTAFFTKVRGGTC 117
             +S P       P C       GVV SCL+CFL  G LY FEY V+   F  K RGGTC
Sbjct: 60  LVSSGPSRNHTHCPTCVPPNEGHGVVSSCLNCFLAGGVLYRFEYSVNAAHFLVKARGGTC 119

Query: 118 TTASSDPPETVIHRAMYLLQNGFGNYNVFQNNCEDFALYCKTGLLILDKQGVGRSGQASS 177
           T A +DP E V+HRA +LLQNGFG Y+VF+NNCEDFA+YCKT LL+L+ + +G+SGQA S
Sbjct: 120 TLAVADPNEIVVHRAKHLLQNGFGCYDVFKNNCEDFAIYCKTALLVLEGRTMGQSGQAVS 179

Query: 178 IVGXXXXXXXXXXXXXXXXXXVGVATVTAGMYCMSRYATDIGVRSDVIKVGVEDLAVNL 236
           I+G                   G+A    G+YC SRYATDIG+R+DV KV  EDL   L
Sbjct: 180 IIGGPIAAVLSTPMRLLTTNVYGMAATAIGVYCASRYATDIGMRADVAKVEAEDLTRRL 238


>AT3G02700.1 | Symbols:  | NC domain-containing protein-related |
           chr3:581727-582813 REVERSE LENGTH=252
          Length = 252

 Score =  221 bits (564), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 129/260 (49%), Positives = 160/260 (61%), Gaps = 17/260 (6%)

Query: 1   MGLLSHRVERHEMKPGDHIYTYRAIFTYSHHGVFVGGSKVVHFRPERNFKSTTETSSNLD 60
           MG LS+++ R ++KPGDHIY++R  + Y+HHG++VG  +V HF   R     T T + LD
Sbjct: 1   MGFLSNKISRDDVKPGDHIYSWRQAYIYAHHGIYVGNGQVNHF--TRGDGQETGTGTFLD 58

Query: 61  D---STS-----TPCEIFPDCGFRQPNSGVVLSCLDCFLRNGSLYCFEYGVSPTAFFTKV 112
           +   S+S      PC   PDCG R    GV+ SCL+CFL  G LY FEY VSP  F  K 
Sbjct: 59  NIIVSSSHNHGDNPC---PDCGDRSNLGGVISSCLECFLAGGDLYVFEYSVSPAIFLAKP 115

Query: 113 RGGTCTTASSDPPETVIHRAMYLLQNGFGNYNVFQNNCEDFALYCKTGLLILDKQGVGRS 172
           RGG CT ASSDPPE VI+RA +LLQNGFG YNVF+NNCEDFA+YCKTGLL+ +   VGRS
Sbjct: 116 RGGVCTIASSDPPEEVIYRANFLLQNGFGVYNVFKNNCEDFAIYCKTGLLVANTD-VGRS 174

Query: 173 GQASSIVGXXXXXXXXXXXXXXXXXXVGVATVTAGMYCMSRYATDIGVRSDVIKVGVEDL 232
           GQA+SIV                    G+A    GMYC SR  +DIG+R DV KV VE L
Sbjct: 175 GQAASIVAAASVLLSSPLRFVAGFG--GLAVAGYGMYCTSRLVSDIGMRWDVSKVPVERL 232

Query: 233 AVNLGWTCPEEEIAAEDETS 252
             ++     + E   EDE +
Sbjct: 233 VADVA-CMSDMEAKPEDEKT 251


>AT5G16360.1 | Symbols:  | NC domain-containing protein-related |
           chr5:5355236-5356195 REVERSE LENGTH=283
          Length = 283

 Score =  187 bits (476), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 112/272 (41%), Positives = 141/272 (51%), Gaps = 36/272 (13%)

Query: 1   MGLLSHRVERHEMKPGDHIYTYRAIFTYSHHGVFVGGSKVVHFRPERNFKSTTETSSNLD 60
           MGL SH++ R ++KPGDHIY++R  + YSHHGV+VG  KV+HF      +  T T  +  
Sbjct: 1   MGLFSHKISRDDLKPGDHIYSWRNAYIYSHHGVYVGDEKVIHFTRGGGLEFGTGTVLDKI 60

Query: 61  DSTSTPC-----EIFPDCGFRQPNSGVVLSCLDCFLRNGSLYCFEYGVSPTAFFTKVRGG 115
              S P      +   DCG +    GV+ SCLDCFL  G+L+ FEY  SP+ F  K RGG
Sbjct: 61  IDISIPNHGRRDKKCIDCGDQSNLGGVISSCLDCFLAGGNLHLFEYSASPSIFLAK-RGG 119

Query: 116 TCTTASSDPPETVIHRAMYLL-QNGFGNYNVFQNNCEDFALYCKTGLLILD-KQGVGRSG 173
           TCT ASSDP + VI RA +LL QNGFG Y++  NNCEDFA+YCKTGL +L      G SG
Sbjct: 120 TCTIASSDPCDEVISRAKFLLLQNGFGEYDLLDNNCEDFAIYCKTGLFVLSVATKFGCSG 179

Query: 174 QASSIVGXXXXXXXXXXXXXXXXXXV----------------------------GVATVT 205
           QA+S+                                                 G+A   
Sbjct: 180 QANSVSAAGGVVALTLKVLGVKKKSSSGHEDDSVVSVVNQFISSTVKYVVPGIGGLALAE 239

Query: 206 AGMYCMSRYATDIGVRSDVIKVGVEDLAVNLG 237
            G YC+ R   DIGVR D  KV VE+L   +G
Sbjct: 240 YGNYCIGRLFYDIGVRKDACKVSVEELVAFVG 271


>AT5G16330.1 | Symbols:  | NC domain-containing protein-related |
           chr5:5346163-5346977 REVERSE LENGTH=242
          Length = 242

 Score =  179 bits (453), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 101/241 (41%), Positives = 136/241 (56%), Gaps = 30/241 (12%)

Query: 1   MGLLSHRVERHEMKPGDHIYTYRAIFTYSHHGVFVGGSKVVHFRPERN-------FKSTT 53
           +G +S+++ R ++KPGDHIY++R  + YSHHG+++G  KV+HF            F    
Sbjct: 9   IGFISNQISRDKLKPGDHIYSWRNAYIYSHHGIYIGDEKVIHFTCGGGLETGTGTFLDKI 68

Query: 54  ETSSNLDDSTSTPCEIFPDCGFRQPNSGVVLSCLDCFLRNGSLYCFEYGVSPTAFFTKVR 113
             S   +     PC    +C  +    GV+ SCLDCFL  G++Y FEY VSP AF  K R
Sbjct: 69  VVSVIPNHKGDNPCS---NCEEQLNLEGVISSCLDCFLAGGNIYLFEYSVSPAAFIAKPR 125

Query: 114 GGTCTTASSDPPETVIHRAMY-LLQNGFGNYNVFQNNCEDFALYCKTGLLILDKQGVGRS 172
            GTCT A SDP + VI RA Y LL+NGFG+Y+  +NNCEDFA+YCKT LL+     +GR 
Sbjct: 126 RGTCTIAPSDPCDEVISRAKYLLLRNGFGDYHALENNCEDFAIYCKTSLLVGKDYVLGRG 185

Query: 173 GQASSIVGXXXXXXXXXXXXXXXXXXVGVATVTA-GMYCMSRYATDIGVRSDVIKVGVED 231
           GQASS+                      +A ++  G   +  +A DIG+R D IKV VE 
Sbjct: 186 GQASSV-----------------SAAAWLAQLSPFGSKAIQLFA-DIGMRKDAIKVPVES 227

Query: 232 L 232
           L
Sbjct: 228 L 228