Miyakogusa Predicted Gene
- Lj1g3v5035080.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v5035080.1 Non Chatacterized Hit- tr|I1MKH9|I1MKH9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.27738
PE,67.48,0,seg,NULL; FAMILY NOT NAMED,NULL; no description,DNA-binding
pseudobarrel domain; B3 DNA binding
doma,NODE_22720_length_2678_cov_31.118372.path1.1
(683 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 | chr4:124... 640 0.0
AT4G23980.2 | Symbols: ARF9 | auxin response factor 9 | chr4:124... 639 0.0
AT3G61830.1 | Symbols: ARF18 | auxin response factor 18 | chr3:2... 621 e-178
AT2G46530.1 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 613 e-175
AT2G46530.3 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 612 e-175
AT1G59750.3 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 563 e-160
AT1G59750.2 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 563 e-160
AT1G59750.1 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 563 e-160
AT1G59750.4 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 563 e-160
AT2G46530.2 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 483 e-136
AT1G35540.1 | Symbols: ARF14 | auxin response factor 14 | chr1:1... 483 e-136
AT1G34390.1 | Symbols: ARF22 | auxin response factor 22 | chr1:1... 482 e-136
AT1G34410.1 | Symbols: ARF21 | auxin response factor 21 | chr1:1... 478 e-135
AT1G34310.1 | Symbols: ARF12 | auxin response factor 12 | chr1:1... 471 e-133
AT1G35520.1 | Symbols: ARF15 | auxin response factor 15 | chr1:1... 462 e-130
AT1G35240.1 | Symbols: ARF20 | auxin response factor 20 | chr1:1... 456 e-128
AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 452 e-127
AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 452 e-127
AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 452 e-127
AT5G62000.4 | Symbols: ARF2 | auxin response factor 2 | chr5:249... 451 e-127
AT1G34170.1 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 342 6e-94
AT1G30330.1 | Symbols: ARF6 | auxin response factor 6 | chr1:106... 317 2e-86
AT1G30330.2 | Symbols: ARF6 | auxin response factor 6 | chr1:106... 317 2e-86
AT5G60450.1 | Symbols: ARF4 | auxin response factor 4 | chr5:243... 317 2e-86
AT5G37020.1 | Symbols: ARF8, ATARF8 | auxin response factor 8 | ... 316 3e-86
AT5G37020.2 | Symbols: ARF8 | auxin response factor 8 | chr5:146... 316 3e-86
AT1G19850.1 | Symbols: MP, ARF5, IAA24 | Transcriptional factor ... 311 8e-85
AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | auxin response fact... 307 1e-83
AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | Tran... 303 3e-82
AT2G33860.1 | Symbols: ETT, ARF3 | Transcriptional factor B3 fam... 303 4e-82
AT1G34170.2 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 303 4e-82
AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23... 302 5e-82
AT1G34170.3 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 302 6e-82
AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | Tran... 302 6e-82
AT2G28350.1 | Symbols: ARF10 | auxin response factor 10 | chr2:1... 239 3e-63
AT4G30080.1 | Symbols: ARF16 | auxin response factor 16 | chr4:1... 238 1e-62
AT1G43950.1 | Symbols: ARF23 | auxin response factor 23 | chr1:1... 224 2e-58
AT1G77850.1 | Symbols: ARF17 | auxin response factor 17 | chr1:2... 189 5e-48
AT5G25890.1 | Symbols: IAA28, IAR2 | indole-3-acetic acid induci... 60 4e-09
AT4G01500.1 | Symbols: NGA4 | AP2/B3-like transcriptional factor... 59 1e-08
AT1G01030.1 | Symbols: NGA3 | AP2/B3-like transcriptional factor... 58 2e-08
AT3G62100.1 | Symbols: IAA30 | indole-3-acetic acid inducible 30... 56 8e-08
AT3G16500.1 | Symbols: PAP1, IAA26 | phytochrome-associated prot... 56 9e-08
AT2G46990.1 | Symbols: IAA20 | indole-3-acetic acid inducible 20... 55 1e-07
AT1G51950.1 | Symbols: IAA18 | indole-3-acetic acid inducible 18... 55 1e-07
AT2G46870.1 | Symbols: NGA1 | AP2/B3-like transcriptional factor... 55 2e-07
AT3G17600.1 | Symbols: IAA31 | indole-3-acetic acid inducible 31... 54 3e-07
AT1G13260.1 | Symbols: RAV1, EDF4 | related to ABI3/VP1 1 | chr1... 53 7e-07
AT2G33310.2 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 53 7e-07
AT2G33310.3 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 53 7e-07
AT2G33310.1 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 53 7e-07
AT1G04550.2 | Symbols: IAA12, BDL | AUX/IAA transcriptional regu... 53 9e-07
AT3G23050.1 | Symbols: IAA7, AXR2 | indole-3-acetic acid 7 | chr... 52 1e-06
AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | AUX/IAA transcriptional... 52 1e-06
AT1G25560.1 | Symbols: TEM1, EDF1 | AP2/B3 transcription factor ... 51 2e-06
AT3G61970.1 | Symbols: NGA2 | AP2/B3-like transcriptional factor... 51 3e-06
AT1G68840.2 | Symbols: RAV2, AtRAV2 | related to ABI3/VP1 2 | ch... 50 4e-06
AT1G68840.1 | Symbols: RAV2, RAP2.8, TEM2, EDF2, AtRAV2 | relate... 50 4e-06
AT3G25730.1 | Symbols: EDF3 | ethylene response DNA binding fact... 50 5e-06
AT2G36080.1 | Symbols: | AP2/B3-like transcriptional factor fam... 49 9e-06
>AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 |
chr4:12451592-12454737 FORWARD LENGTH=638
Length = 638
Score = 640 bits (1650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/645 (53%), Positives = 432/645 (66%), Gaps = 54/645 (8%)
Query: 24 LDTELWKLCAGPLVDVPRSGERVFYFPQGHMEQLQASTNQEGNLDLNQQFPHFNLPSKIL 83
L ELWKLCAGPLVDVP++ ERV+YFPQGHMEQL+AST Q +DLN P F LP KIL
Sbjct: 9 LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQ---VDLNTMKPLFVLPPKIL 65
Query: 84 CRVVHIQLLAEQESDEVYARITLIPESNQ-SEPTCPDSTQPETQKHKFHSFSKILTASDT 142
C V+++ L AE+++DEVYA+ITLIP + EP PD + PE Q+ K HSFSK+LTASDT
Sbjct: 66 CNVMNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRPKVHSFSKVLTASDT 125
Query: 143 STHGGFSVLRRHATECLPQLDMTQAIPTQELAAKDLHGFEWKFKHIFRGQPRRHLLTTGW 202
STHGGFSVLR+HATECLP LDMTQ PTQEL A+D+HG++WKFKHIFRGQPRRHLLTTGW
Sbjct: 126 STHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTTGW 185
Query: 203 STFVTSKRLVAGDAFVFLRGENGDLRVGVRRLARXXXXXXXXXXXXXXXHLGVLATASHA 262
STFVTSKRLVAGD FVFLRGENG+LRVGVRR HLGVLATA HA
Sbjct: 186 STFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVLATARHA 245
Query: 263 VLTCTMFVVYYKPRTSQFIIGVNKYLEALTNKFSVGMRFKMRFEVEDSPERRFSGTIVDV 322
T TMF+VYYKPRTSQFII +NKYLEA++NKFSVGMRFKMRFE EDSPERR+SGT++ V
Sbjct: 246 TQTKTMFIVYYKPRTSQFIISLNKYLEAMSNKFSVGMRFKMRFEGEDSPERRYSGTVIGV 305
Query: 323 GDVSPGWSNSQWRSLKVQWDEPASIPRPERVSSWEIEPFVASTTSNVTEP-LVKSKRTRP 381
D SP W +S+WR L+V WDEPASI RP +VS WEIEPFV S NV + ++K+KR R
Sbjct: 306 KDCSPHWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNS--ENVPKSVMLKNKRPRQ 363
Query: 382 -PEVSSSEIALNSPFSTFWYHGPSLSHEPTQLGGAAEPENNENRVVRSLKGQREINGNPH 440
EVS+ ++ + + S W + HE Q
Sbjct: 364 VSEVSALDVGITA--SNLWSSVLTQPHEFAQSC--------------------------- 394
Query: 441 LNLSSNFINPEP---KNNKDVAALSSACGYYPVSSRPNDGSAHDQVES---GKKTENSMD 494
++S + +P+ N+D Y VS+ D + +DQ+ S KK E + +
Sbjct: 395 --ITSQWSSPQQCHRDANEDAKKSDWLNNSYSVSNVAKDSTLNDQMVSPVEQKKPETTAN 452
Query: 495 CWVFGVNLTTTFPNVDKELGCQVIIPSGPNDPLPIAACETETEGGHNPNYSVSNKEQKQI 554
+FG++L ++ V +E + P P+ I+ ++ S ++E+KQ
Sbjct: 453 YRLFGIDLMSSSLAVPEE-------KTAPMRPINISKPTMDSHSDPKSEISKVSEEKKQE 505
Query: 555 ISDASLNERQNKQVSIPSLRTRTKVQMQGIAVGRAVDLTMLKDYDDLIDELEKLFDIKGE 614
++ S E Q+KQ S S R+RTKVQMQG+ VGRAVDL LK Y++LID++EKLFDIKGE
Sbjct: 506 PAEGSPKEVQSKQSS--STRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGE 563
Query: 615 LRVQNKWNIAFTDYANDMMLVGDHPWQEFCTIVKRISIYAREDVK 659
LR +N+W I FTD DMMLVGD PW EFC +VKRI I+++E+VK
Sbjct: 564 LRSRNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVK 608
>AT4G23980.2 | Symbols: ARF9 | auxin response factor 9 |
chr4:12451592-12454737 FORWARD LENGTH=636
Length = 636
Score = 639 bits (1647), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/643 (54%), Positives = 426/643 (66%), Gaps = 52/643 (8%)
Query: 24 LDTELWKLCAGPLVDVPRSGERVFYFPQGHMEQLQASTNQEGNLDLNQQFPHFNLPSKIL 83
L ELWKLCAGPLVDVP++ ERV+YFPQGHMEQL+AST Q +DLN P F LP KIL
Sbjct: 9 LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQ---VDLNTMKPLFVLPPKIL 65
Query: 84 CRVVHIQLLAEQESDEVYARITLIPESNQ-SEPTCPDSTQPETQKHKFHSFSKILTASDT 142
C V+++ L AE+++DEVYA+ITLIP + EP PD + PE Q+ K HSFSK+LTASDT
Sbjct: 66 CNVMNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRPKVHSFSKVLTASDT 125
Query: 143 STHGGFSVLRRHATECLPQLDMTQAIPTQELAAKDLHGFEWKFKHIFRGQPRRHLLTTGW 202
STHGGFSVLR+HATECLP LDMTQ PTQEL A+D+HG++WKFKHIFRGQPRRHLLTTGW
Sbjct: 126 STHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTTGW 185
Query: 203 STFVTSKRLVAGDAFVFLRGENGDLRVGVRRLARXXXXXXXXXXXXXXXHLGVLATASHA 262
STFVTSKRLVAGD FVFLRGENG+LRVGVRR HLGVLATA HA
Sbjct: 186 STFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVLATARHA 245
Query: 263 VLTCTMFVVYYKPRTSQFIIGVNKYLEALTNKFSVGMRFKMRFEVEDSPERRFSGTIVDV 322
T TMF+VYYKPRTSQFII +NKYLEA++NKFSVGMRFKMRFE EDSPERR+SGT++ V
Sbjct: 246 TQTKTMFIVYYKPRTSQFIISLNKYLEAMSNKFSVGMRFKMRFEGEDSPERRYSGTVIGV 305
Query: 323 GDVSPGWSNSQWRSLKVQWDEPASIPRPERVSSWEIEPFVASTTSNVTEPLVKSKRTRPP 382
D SP W +S+WR L+V WDEPASI RP +VS WEIEPFV S NV + V K RP
Sbjct: 306 KDCSPHWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNS--ENVPKS-VMLKNKRPR 362
Query: 383 EVSSSEIALNSPFSTFWYHGPSLSHEPTQLGGAAEPENNENRVVRSLKGQREINGNPHLN 442
+VS AL S W + HE Q
Sbjct: 363 QVSEVS-ALGITASNLWSSVLTQPHEFAQSC----------------------------- 392
Query: 443 LSSNFINPEP---KNNKDVAALSSACGYYPVSSRPNDGSAHDQVES---GKKTENSMDCW 496
++S + +P+ N+D Y VS+ D + +DQ+ S KK E + +
Sbjct: 393 ITSQWSSPQQCHRDANEDAKKSDWLNNSYSVSNVAKDSTLNDQMVSPVEQKKPETTANYR 452
Query: 497 VFGVNLTTTFPNVDKELGCQVIIPSGPNDPLPIAACETETEGGHNPNYSVSNKEQKQIIS 556
+FG++L ++ V +E + P P+ I+ ++ S ++E+KQ +
Sbjct: 453 LFGIDLMSSSLAVPEE-------KTAPMRPINISKPTMDSHSDPKSEISKVSEEKKQEPA 505
Query: 557 DASLNERQNKQVSIPSLRTRTKVQMQGIAVGRAVDLTMLKDYDDLIDELEKLFDIKGELR 616
+ S E Q+KQ S S R+RTKVQMQG+ VGRAVDL LK Y++LID++EKLFDIKGELR
Sbjct: 506 EGSPKEVQSKQSS--STRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELR 563
Query: 617 VQNKWNIAFTDYANDMMLVGDHPWQEFCTIVKRISIYAREDVK 659
+N+W I FTD DMMLVGD PW EFC +VKRI I+++E+VK
Sbjct: 564 SRNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVK 606
>AT3G61830.1 | Symbols: ARF18 | auxin response factor 18 |
chr3:22888171-22891179 FORWARD LENGTH=602
Length = 602
Score = 621 bits (1601), Expect = e-178, Method: Compositional matrix adjust.
Identities = 341/666 (51%), Positives = 420/666 (63%), Gaps = 99/666 (14%)
Query: 1 MAHLKGAHLRGTTEETGLGDDDQLDTELWKLCAGPLVDVPRSGERVFYFPQGHMEQLQAS 60
MA ++G G++ DQL TELWK+CAGPLV+VPR+ ERVFYFPQGHMEQL AS
Sbjct: 1 MASVEGDDDFGSSSSRSY--QDQLYTELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVAS 58
Query: 61 TNQEGNLDLNQQFPHFNLPSKILCRVVHIQLLAEQESDEVYARITLIPESNQSEPTCPDS 120
TNQ N +++ P F+LP KILCRV+ + L AE E+DEVYA+ITL PE +QSEPT D
Sbjct: 59 TNQGIN---SEEIPVFDLPPKILCRVLDVTLKAEHETDEVYAQITLQPEEDQSEPTSLDP 115
Query: 121 TQPETQKHKFHSFSKILTASDTSTHGGFSVLRRHATECLPQLDMTQAIPTQELAAKDLHG 180
K +FHSF KILTASDTSTHGGFSVLR+HATECLP LDMTQA PTQEL +DLHG
Sbjct: 116 PIVGPTKQEFHSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHG 175
Query: 181 FEWKFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGDLRVGVRRLARXXXX 240
FEW+FKHIFRGQPRRHLLTTGWSTFV+SKRLVAGDAFVFLRGENGDLRVGVRRLAR
Sbjct: 176 FEWRFKHIFRGQPRRHLLTTGWSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQST 235
Query: 241 XXXXXXXXXXXHLGVLATASHAVLTCTMFVVYYKPRTSQFIIGVNKYLEALTNKFSVGMR 300
HLGVLATASHAV T T+FVV+YKPR SQFI+GVNKY+EA+ + FS+G R
Sbjct: 236 MPTSVISSQSMHLGVLATASHAVRTTTIFVVFYKPRISQFIVGVNKYMEAIKHGFSLGTR 295
Query: 301 FKMRFEVEDSPERRFSGTIVDVGDVSPGWSNSQWRSLKVQWDEPASIPRPERVSSWEIEP 360
F+MRFE E+SPER F+GTIV GD+S W S+WRSL+VQWDEP ++ RP++VS WEIEP
Sbjct: 296 FRMRFEGEESPERIFTGTIVGSGDLSSQWPASKWRSLQVQWDEPTTVQRPDKVSPWEIEP 355
Query: 361 FVAST--TSNVTEPLVKSKRTRPPEVSSSEIALNSPFSTFWYHGPSLSHEPTQLGGAAEP 418
F+A++ ++ +P K KR+RP E S A S F Y P
Sbjct: 356 FLATSPISTPAQQPQSKCKRSRPIEPSVKTPAPPS----FLYSLP--------------- 396
Query: 419 ENNENRVVRSLK-----GQREINGNPHLNLSSNFINPEPKNNKDVAALSSACGYYPVSSR 473
+++ + SLK I+G N S P P N C Y
Sbjct: 397 -QSQDSINASLKLFQDPSLERISGGYSSNNSFKPETPPPPTN---------CSYR----- 441
Query: 474 PNDGSAHDQVESGKKTENSMDCWVFGVNLTTTFPNVDKELGCQVIIPSGPNDPLPIAACE 533
+FG +LT+ P P D P+ C
Sbjct: 442 -----------------------LFGFDLTSNSPA------------PIPQDKQPMDTC- 465
Query: 534 TETEGGHNPNYSVSNKEQKQIISDASLNERQNKQVSIPSLRTRTKVQMQGIAVGRAVDLT 593
+ ++ I+ S++E++ +Q S R+RTKVQMQGIAVGRAVDLT
Sbjct: 466 -------------GAAKCQEPITPTSMSEQKKQQTS----RSRTKVQMQGIAVGRAVDLT 508
Query: 594 MLKDYDDLIDELEKLFDIKGELRVQNKWNIAFTDYANDMMLVGDHPWQEFCTIVKRISIY 653
+LK YD+LIDELE++F+I+G+L ++KW + FTD DMML GD PW EFC + K+I IY
Sbjct: 509 LLKSYDELIDELEEMFEIQGQLLARDKWIVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIY 568
Query: 654 AREDVK 659
+ ++VK
Sbjct: 569 SSDEVK 574
>AT2G46530.1 | Symbols: ARF11 | auxin response factor 11 |
chr2:19104993-19108029 FORWARD LENGTH=601
Length = 601
Score = 613 bits (1582), Expect = e-175, Method: Compositional matrix adjust.
Identities = 351/659 (53%), Positives = 417/659 (63%), Gaps = 99/659 (15%)
Query: 16 TGLGDDDQLDTELWKLCAGPLVDVPRSGERVFYFPQGHMEQLQASTNQEGNLDLNQQFPH 75
T +DD+L TELWK CAGPLV+VPR GERVFYFPQGHMEQL ASTNQ G +D Q+ P
Sbjct: 10 TSGSNDDELYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQ-GVVD--QEIPV 66
Query: 76 FNLPSKILCRVVHIQLLAEQESDEVYARITLIPESNQSEPTCPDSTQPETQKHKFHSFSK 135
FNLP KILCRV+ + L AE E+DEVYA+ITL PE +QSEPT D E K SF K
Sbjct: 67 FNLPPKILCRVLSVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLVEPAKPTVDSFVK 126
Query: 136 ILTASDTSTHGGFSVLRRHATECLPQLDMTQAIPTQELAAKDLHGFEWKFKHIFRGQPRR 195
ILTASDTSTHGGFSVLR+HATECLP LDMTQ PTQEL A+DLHG+EW+FKHIFRGQPRR
Sbjct: 127 ILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRR 186
Query: 196 HLLTTGWSTFVTSKRLVAGDAFVFLRGENGDLRVGVRRLARXXXXXXXXXXXXXXXHLGV 255
HLLTTGWSTFVTSKRLVAGDAFVFLRGE GDLRVGVRRLA+ LGV
Sbjct: 187 HLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSMRLGV 246
Query: 256 LATASHAVLTCTMFVVYYKPRTSQFIIGVNKYLEALTNKFSVGMRFKMRFEVEDSPERRF 315
LATASHAV T T+FVV+YKPR SQFII VNKY+ A+ N FS+GMR++MRFE E+SPER F
Sbjct: 247 LATASHAVTTTTIFVVFYKPRISQFIISVNKYMMAMKNGFSLGMRYRMRFEGEESPERIF 306
Query: 316 SGTIVDVGDVSPGWSNSQWRSLKVQWDEPASIPRPERVSSWEIEPFVAST-TSNVTEPLV 374
+GTI+ GD+S W S+WRSL++QWDEP+SI RP +VS WEIEPF S T T+
Sbjct: 307 TGTIIGSGDLSSQWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPFSPSALTPTPTQQQS 366
Query: 375 KSKRTRPPEVSSSEIALNSPFSTFWYHGPSLSHEPTQLGGAAEPENNENRVVRSLKGQRE 434
KSKR+RP SEI SP ++ + S SHE
Sbjct: 367 KSKRSRP----ISEIT-GSPVASSFLSSFSQSHE-------------------------- 395
Query: 435 INGNPHLNLSSNFINPEPKNNKDVAALSSA--CGY--YPVSSRPNDGSAHDQVESGKKTE 490
NP + L F +P + N + + SS C PV+S
Sbjct: 396 --SNPSVKLL--FQDPATERNSNKSVFSSGLQCKITEAPVTS------------------ 433
Query: 491 NSMDCWVFGVNLTT-----TFPNVDKELGCQVIIPSGPNDPLPIAACETETEGGHNPNYS 545
C +FG +LT+ T P+ DK+L + + S +D T +PN S
Sbjct: 434 ---SCRLFGFDLTSKPASATIPH-DKQL---ISVDSNISD---------STTKCQDPNSS 477
Query: 546 VSNKEQKQIISDASLNERQNKQVSIPSLRTRTKVQMQGIAVGRAVDLTMLKDYDDLIDEL 605
S KEQKQ S R+R KVQMQG AVGRAVDLT+L+ YD+LI EL
Sbjct: 478 NSPKEQKQQTS----------------TRSRIKVQMQGTAVGRAVDLTLLRSYDELIKEL 521
Query: 606 EKLFDIKGELRVQNKWNIAFTDYANDMMLVGDHPWQEFCTIVKRISIYAREDV-KMKCK 663
EK+F+I+GEL ++KW I FTD D MLVGD PW EFC + K++ IY ++V KM+ K
Sbjct: 522 EKMFEIEGELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKMRSK 580
>AT2G46530.3 | Symbols: ARF11 | auxin response factor 11 |
chr2:19105112-19108029 FORWARD LENGTH=622
Length = 622
Score = 612 bits (1578), Expect = e-175, Method: Compositional matrix adjust.
Identities = 348/651 (53%), Positives = 415/651 (63%), Gaps = 91/651 (13%)
Query: 20 DDDQLDTELWKLCAGPLVDVPRSGERVFYFPQGHMEQLQASTNQEGNLDLNQQFPHFNLP 79
+DD+L TELWK CAGPLV+VPR GERVFYFPQGHMEQL ASTNQ G +D Q+ P FNLP
Sbjct: 35 NDDELYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQ-GVVD--QEIPVFNLP 91
Query: 80 SKILCRVVHIQLLAEQESDEVYARITLIPESNQSEPTCPDSTQPETQKHKFHSFSKILTA 139
KILCRV+ + L AE E+DEVYA+ITL PE +QSEPT D E K SF KILTA
Sbjct: 92 PKILCRVLSVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLVEPAKPTVDSFVKILTA 151
Query: 140 SDTSTHGGFSVLRRHATECLPQLDMTQAIPTQELAAKDLHGFEWKFKHIFRGQPRRHLLT 199
SDTSTHGGFSVLR+HATECLP LDMTQ PTQEL A+DLHG+EW+FKHIFRGQPRRHLLT
Sbjct: 152 SDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLT 211
Query: 200 TGWSTFVTSKRLVAGDAFVFLRGENGDLRVGVRRLARXXXXXXXXXXXXXXXHLGVLATA 259
TGWSTFVTSKRLVAGDAFVFLRGE GDLRVGVRRLA+ LGVLATA
Sbjct: 212 TGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSMRLGVLATA 271
Query: 260 SHAVLTCTMFVVYYKPRTSQFIIGVNKYLEALTNKFSVGMRFKMRFEVEDSPERRFSGTI 319
SHAV T T+FVV+YKPR SQFII VNKY+ A+ N FS+GMR++MRFE E+SPER F+GTI
Sbjct: 272 SHAVTTTTIFVVFYKPRISQFIISVNKYMMAMKNGFSLGMRYRMRFEGEESPERIFTGTI 331
Query: 320 VDVGDVSPGWSNSQWRSLKVQWDEPASIPRPERVSSWEIEPFVAST-TSNVTEPLVKSKR 378
+ GD+S W S+WRSL++QWDEP+SI RP +VS WEIEPF S T T+ KSKR
Sbjct: 332 IGSGDLSSQWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPFSPSALTPTPTQQQSKSKR 391
Query: 379 TRPPEVSSSEIALNSPFSTFWYHGPSLSHEPTQLGGAAEPENNENRVVRSLKGQREINGN 438
+RP SEI SP ++ + S SHE N
Sbjct: 392 SRP----ISEIT-GSPVASSFLSSFSQSHE----------------------------SN 418
Query: 439 PHLNLSSNFINPEPKNNKDVAALSSACGYYPVSSRPNDGSAHDQVESGKKTENSMDCWVF 498
P + L F +P + N + + SS ++ P S C +F
Sbjct: 419 PSVKLL--FQDPATERNSNKSVFSSGL-QCKITEAPVTSS----------------CRLF 459
Query: 499 GVNLTT-----TFPNVDKELGCQVIIPSGPNDPLPIAACETETEGGHNPNYSVSNKEQKQ 553
G +LT+ T P+ DK+L + + S +D T +PN S S KEQKQ
Sbjct: 460 GFDLTSKPASATIPH-DKQL---ISVDSNISD---------STTKCQDPNSSNSPKEQKQ 506
Query: 554 IISDASLNERQNKQVSIPSLRTRTKVQMQGIAVGRAVDLTMLKDYDDLIDELEKLFDIKG 613
S R+R KVQMQG AVGRAVDLT+L+ YD+LI ELEK+F+I+G
Sbjct: 507 QTST----------------RSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEG 550
Query: 614 ELRVQNKWNIAFTDYANDMMLVGDHPWQEFCTIVKRISIYAREDV-KMKCK 663
EL ++KW I FTD D MLVGD PW EFC + K++ IY ++V KM+ K
Sbjct: 551 ELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKMRSK 601
>AT1G59750.3 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=665
Length = 665
Score = 563 bits (1452), Expect = e-160, Method: Compositional matrix adjust.
Identities = 325/654 (49%), Positives = 409/654 (62%), Gaps = 58/654 (8%)
Query: 22 DQLDTELWKLCAGPLVDVPRSGERVFYFPQGHMEQLQASTNQEGNLDLNQQFPHFNLPSK 81
D L ELW CAGPLV +PR GERV+YFP+GHMEQL+AS +Q L QQ P FNLPSK
Sbjct: 17 DALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQ----GLEQQMPSFNLPSK 72
Query: 82 ILCRVVHIQLLAEQESDEVYARITLIPESNQSEPTCPDSTQPETQKHKFHSFSKILTASD 141
ILC+V++IQ AE E+DEVYA+ITL+PE +QSEPT PD+ E +K HSF K LTASD
Sbjct: 73 ILCKVINIQRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQEPEKCTVHSFCKTLTASD 132
Query: 142 TSTHGGFSVLRRHATECLPQLDMTQAIPTQELAAKDLHGFEWKFKHIFRGQPRRHLLTTG 201
TSTHGGFSVLRRHA +CLP LDM+Q P QEL A DLH EW F+HIFRGQPRRHLLTTG
Sbjct: 133 TSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTG 192
Query: 202 WSTFVTSKRLVAGDAFVFLRGENGDLRVGVRRLARXXXXXXXXXXXXXXXHLGVLATASH 261
WS FV+SK+LVAGDAF+FLRGEN +LRVGVRR R H+GVLATA+H
Sbjct: 193 WSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAH 252
Query: 262 AVLTCTMFVVYYKPRT--SQFIIGVNKYLEALTNKFSVGMRFKMRFEVEDSPERRFSGTI 319
A+ T T+F V+YKPRT S+FI+ VN+YLEA T K SVGMRFKMRFE E++PE+RFSGTI
Sbjct: 253 AITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKRFSGTI 312
Query: 320 VDVGD-VSPGWSNSQWRSLKVQWDEPASIPRPERVSSWEIEPFVA-STTSNVTEPLVKSK 377
V V + S W +S+WRSLKVQWDEP+S+ RPERVS WE+EP VA ST S+ +P ++K
Sbjct: 313 VGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNK 372
Query: 378 RTRPPEVSSSEIALNSPFST--FWYHGPSLSHEPTQLGGAAEPENNENRVVRSLKGQREI 435
R RPP + S + P + W S + P+ + + P ++
Sbjct: 373 RPRPPGLPSPATGPSGPVTPDGVWK---SPADTPSSVPLFSPP-------AKAATFGHGG 422
Query: 436 NGNPHLNLSSNFINPEPKNNKDVAALSSACGYYPVSSRPNDGSAHDQVESGKKTENSMDC 495
N + +++ S F N D AA S A SA + + KK N C
Sbjct: 423 NKSFGVSIGSAFW----PTNADSAAESFA-------------SAFNNESTEKKQTNGNVC 465
Query: 496 WVFGVNLTTTFPNVDKELGCQVIIPSGPNDPLPIAACETETEGGHNPNYSVSNKEQKQII 555
+FG L NVD+ + + D P+ + E ++ P N Q I
Sbjct: 466 RLFGFELVENV-NVDECFSAASVSGAVAVD-QPVPSNEFDSGQQSEP----LNINQSDIP 519
Query: 556 SDA---------SLNERQNKQVSIPSLRTRTKVQMQGIAVGRAVDLTMLKDYDDLIDELE 606
S + S E Q++Q+ R+ TKV MQG AVGRA+DLT + Y+DL +LE
Sbjct: 520 SGSGDPEKSSLRSPQESQSRQI-----RSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLE 574
Query: 607 KLFDIKGE-LRVQNKWNIAFTDYANDMMLVGDHPWQEFCTIVKRISIYAREDVK 659
++FDIKGE L KW + +TD +DMM+VGD PW EFC +V++I IY E+VK
Sbjct: 575 EMFDIKGELLESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVK 628
>AT1G59750.2 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=662
Length = 662
Score = 563 bits (1452), Expect = e-160, Method: Compositional matrix adjust.
Identities = 325/652 (49%), Positives = 408/652 (62%), Gaps = 57/652 (8%)
Query: 22 DQLDTELWKLCAGPLVDVPRSGERVFYFPQGHMEQLQASTNQEGNLDLNQQFPHFNLPSK 81
D L ELW CAGPLV +PR GERV+YFP+GHMEQL+AS +Q L QQ P FNLPSK
Sbjct: 17 DALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQ----GLEQQMPSFNLPSK 72
Query: 82 ILCRVVHIQLLAEQESDEVYARITLIPESNQSEPTCPDSTQPETQKHKFHSFSKILTASD 141
ILC+V++IQ AE E+DEVYA+ITL+PE +QSEPT PD+ E +K HSF K LTASD
Sbjct: 73 ILCKVINIQRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQEPEKCTVHSFCKTLTASD 132
Query: 142 TSTHGGFSVLRRHATECLPQLDMTQAIPTQELAAKDLHGFEWKFKHIFRGQPRRHLLTTG 201
TSTHGGFSVLRRHA +CLP LDM+Q P QEL A DLH EW F+HIFRGQPRRHLLTTG
Sbjct: 133 TSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTG 192
Query: 202 WSTFVTSKRLVAGDAFVFLRGENGDLRVGVRRLARXXXXXXXXXXXXXXXHLGVLATASH 261
WS FV+SK+LVAGDAF+FLRGEN +LRVGVRR R H+GVLATA+H
Sbjct: 193 WSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAH 252
Query: 262 AVLTCTMFVVYYKPRT--SQFIIGVNKYLEALTNKFSVGMRFKMRFEVEDSPERRFSGTI 319
A+ T T+F V+YKPRT S+FI+ VN+YLEA T K SVGMRFKMRFE E++PE+RFSGTI
Sbjct: 253 AITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKRFSGTI 312
Query: 320 VDVGD-VSPGWSNSQWRSLKVQWDEPASIPRPERVSSWEIEPFVA-STTSNVTEPLVKSK 377
V V + S W +S+WRSLKVQWDEP+S+ RPERVS WE+EP VA ST S+ +P ++K
Sbjct: 313 VGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNK 372
Query: 378 RTRPPEVSSSEIALNSPFSTFWYHGPSLSHEPTQLGGAAEPENNENRVVRSLKGQREING 437
R RPP + S + P W S + P+ + + P ++ N
Sbjct: 373 RPRPPGLPSPATGPSGP-DGVWK---SPADTPSSVPLFSPP-------AKAATFGHGGNK 421
Query: 438 NPHLNLSSNFINPEPKNNKDVAALSSACGYYPVSSRPNDGSAHDQVESGKKTENSMDCWV 497
+ +++ S F N D AA S A SA + + KK N C +
Sbjct: 422 SFGVSIGSAFW----PTNADSAAESFA-------------SAFNNESTEKKQTNGNVCRL 464
Query: 498 FGVNLTTTFPNVDKELGCQVIIPSGPNDPLPIAACETETEGGHNPNYSVSNKEQKQIISD 557
FG L NVD+ + + D P+ + E ++ P N Q I S
Sbjct: 465 FGFELVENV-NVDECFSAASVSGAVAVD-QPVPSNEFDSGQQSEP----LNINQSDIPSG 518
Query: 558 A---------SLNERQNKQVSIPSLRTRTKVQMQGIAVGRAVDLTMLKDYDDLIDELEKL 608
+ S E Q++Q+ R+ TKV MQG AVGRA+DLT + Y+DL +LE++
Sbjct: 519 SGDPEKSSLRSPQESQSRQI-----RSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEM 573
Query: 609 FDIKGE-LRVQNKWNIAFTDYANDMMLVGDHPWQEFCTIVKRISIYAREDVK 659
FDIKGE L KW + +TD +DMM+VGD PW EFC +V++I IY E+VK
Sbjct: 574 FDIKGELLESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVK 625
>AT1G59750.1 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=665
Length = 665
Score = 563 bits (1452), Expect = e-160, Method: Compositional matrix adjust.
Identities = 325/654 (49%), Positives = 409/654 (62%), Gaps = 58/654 (8%)
Query: 22 DQLDTELWKLCAGPLVDVPRSGERVFYFPQGHMEQLQASTNQEGNLDLNQQFPHFNLPSK 81
D L ELW CAGPLV +PR GERV+YFP+GHMEQL+AS +Q L QQ P FNLPSK
Sbjct: 17 DALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQ----GLEQQMPSFNLPSK 72
Query: 82 ILCRVVHIQLLAEQESDEVYARITLIPESNQSEPTCPDSTQPETQKHKFHSFSKILTASD 141
ILC+V++IQ AE E+DEVYA+ITL+PE +QSEPT PD+ E +K HSF K LTASD
Sbjct: 73 ILCKVINIQRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQEPEKCTVHSFCKTLTASD 132
Query: 142 TSTHGGFSVLRRHATECLPQLDMTQAIPTQELAAKDLHGFEWKFKHIFRGQPRRHLLTTG 201
TSTHGGFSVLRRHA +CLP LDM+Q P QEL A DLH EW F+HIFRGQPRRHLLTTG
Sbjct: 133 TSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTG 192
Query: 202 WSTFVTSKRLVAGDAFVFLRGENGDLRVGVRRLARXXXXXXXXXXXXXXXHLGVLATASH 261
WS FV+SK+LVAGDAF+FLRGEN +LRVGVRR R H+GVLATA+H
Sbjct: 193 WSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAH 252
Query: 262 AVLTCTMFVVYYKPRT--SQFIIGVNKYLEALTNKFSVGMRFKMRFEVEDSPERRFSGTI 319
A+ T T+F V+YKPRT S+FI+ VN+YLEA T K SVGMRFKMRFE E++PE+RFSGTI
Sbjct: 253 AITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKRFSGTI 312
Query: 320 VDVGD-VSPGWSNSQWRSLKVQWDEPASIPRPERVSSWEIEPFVA-STTSNVTEPLVKSK 377
V V + S W +S+WRSLKVQWDEP+S+ RPERVS WE+EP VA ST S+ +P ++K
Sbjct: 313 VGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNK 372
Query: 378 RTRPPEVSSSEIALNSPFST--FWYHGPSLSHEPTQLGGAAEPENNENRVVRSLKGQREI 435
R RPP + S + P + W S + P+ + + P ++
Sbjct: 373 RPRPPGLPSPATGPSGPVTPDGVWK---SPADTPSSVPLFSPP-------AKAATFGHGG 422
Query: 436 NGNPHLNLSSNFINPEPKNNKDVAALSSACGYYPVSSRPNDGSAHDQVESGKKTENSMDC 495
N + +++ S F N D AA S A SA + + KK N C
Sbjct: 423 NKSFGVSIGSAFW----PTNADSAAESFA-------------SAFNNESTEKKQTNGNVC 465
Query: 496 WVFGVNLTTTFPNVDKELGCQVIIPSGPNDPLPIAACETETEGGHNPNYSVSNKEQKQII 555
+FG L NVD+ + + D P+ + E ++ P N Q I
Sbjct: 466 RLFGFELVENV-NVDECFSAASVSGAVAVD-QPVPSNEFDSGQQSEP----LNINQSDIP 519
Query: 556 SDA---------SLNERQNKQVSIPSLRTRTKVQMQGIAVGRAVDLTMLKDYDDLIDELE 606
S + S E Q++Q+ R+ TKV MQG AVGRA+DLT + Y+DL +LE
Sbjct: 520 SGSGDPEKSSLRSPQESQSRQI-----RSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLE 574
Query: 607 KLFDIKGE-LRVQNKWNIAFTDYANDMMLVGDHPWQEFCTIVKRISIYAREDVK 659
++FDIKGE L KW + +TD +DMM+VGD PW EFC +V++I IY E+VK
Sbjct: 575 EMFDIKGELLESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVK 628
>AT1G59750.4 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=660
Length = 660
Score = 563 bits (1450), Expect = e-160, Method: Compositional matrix adjust.
Identities = 325/652 (49%), Positives = 407/652 (62%), Gaps = 59/652 (9%)
Query: 22 DQLDTELWKLCAGPLVDVPRSGERVFYFPQGHMEQLQASTNQEGNLDLNQQFPHFNLPSK 81
D L ELW CAGPLV +PR GERV+YFP+GHMEQL+AS +Q L QQ P FNLPSK
Sbjct: 17 DALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQ----GLEQQMPSFNLPSK 72
Query: 82 ILCRVVHIQLLAEQESDEVYARITLIPESNQSEPTCPDSTQPETQKHKFHSFSKILTASD 141
ILC+V++IQ AE E+DEVYA+ITL+PE +QSEPT PD+ E +K HSF K LTASD
Sbjct: 73 ILCKVINIQRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQEPEKCTVHSFCKTLTASD 132
Query: 142 TSTHGGFSVLRRHATECLPQLDMTQAIPTQELAAKDLHGFEWKFKHIFRGQPRRHLLTTG 201
TSTHGGFSVLRRHA +CLP LDM+Q P QEL A DLH EW F+HIFRGQPRRHLLTTG
Sbjct: 133 TSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTG 192
Query: 202 WSTFVTSKRLVAGDAFVFLRGENGDLRVGVRRLARXXXXXXXXXXXXXXXHLGVLATASH 261
WS FV+SK+LVAGDAF+FLRGEN +LRVGVRR R H+GVLATA+H
Sbjct: 193 WSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAH 252
Query: 262 AVLTCTMFVVYYKPRT--SQFIIGVNKYLEALTNKFSVGMRFKMRFEVEDSPERRFSGTI 319
A+ T T+F V+YKPRT S+FI+ VN+YLEA T K SVGMRFKMRFE E++PE+RFSGTI
Sbjct: 253 AITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKRFSGTI 312
Query: 320 VDVGD-VSPGWSNSQWRSLKVQWDEPASIPRPERVSSWEIEPFVA-STTSNVTEPLVKSK 377
V V + S W +S+WRSLKVQWDEP+S+ RPERVS WE+EP VA ST S+ +P ++K
Sbjct: 313 VGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNK 372
Query: 378 RTRPPEVSSSEIALNSPFSTFWYHGPSLSHEPTQLGGAAEPENNENRVVRSLKGQREING 437
R RPP + S P W S + P+ + + P ++ N
Sbjct: 373 RPRPPGLPSPATG---PSDGVWK---SPADTPSSVPLFSPP-------AKAATFGHGGNK 419
Query: 438 NPHLNLSSNFINPEPKNNKDVAALSSACGYYPVSSRPNDGSAHDQVESGKKTENSMDCWV 497
+ +++ S F N D AA S A SA + + KK N C +
Sbjct: 420 SFGVSIGSAFW----PTNADSAAESFA-------------SAFNNESTEKKQTNGNVCRL 462
Query: 498 FGVNLTTTFPNVDKELGCQVIIPSGPNDPLPIAACETETEGGHNPNYSVSNKEQKQIISD 557
FG L NVD+ + + D P+ + E ++ P N Q I S
Sbjct: 463 FGFELVENV-NVDECFSAASVSGAVAVD-QPVPSNEFDSGQQSEP----LNINQSDIPSG 516
Query: 558 A---------SLNERQNKQVSIPSLRTRTKVQMQGIAVGRAVDLTMLKDYDDLIDELEKL 608
+ S E Q++Q+ R+ TKV MQG AVGRA+DLT + Y+DL +LE++
Sbjct: 517 SGDPEKSSLRSPQESQSRQI-----RSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEM 571
Query: 609 FDIKGE-LRVQNKWNIAFTDYANDMMLVGDHPWQEFCTIVKRISIYAREDVK 659
FDIKGE L KW + +TD +DMM+VGD PW EFC +V++I IY E+VK
Sbjct: 572 FDIKGELLESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVK 623
>AT2G46530.2 | Symbols: ARF11 | auxin response factor 11 |
chr2:19105511-19108029 FORWARD LENGTH=514
Length = 514
Score = 483 bits (1244), Expect = e-136, Method: Compositional matrix adjust.
Identities = 288/574 (50%), Positives = 344/574 (59%), Gaps = 98/574 (17%)
Query: 103 RITLIPESNQS--EPTCPDSTQPETQKHKFHSFSKILTASDTSTHGGFSVLRRHATECLP 160
R TL NQ EPT D E K SF KILTASDTSTHGGFSVLR+HATECLP
Sbjct: 5 RFTLRSHYNQKKIEPTSLDPPLVEPAKPTVDSFVKILTASDTSTHGGFSVLRKHATECLP 64
Query: 161 QLDMTQAIPTQELAAKDLHGFEWKFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFL 220
LDMTQ PTQEL A+DLHG+EW+FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFL
Sbjct: 65 SLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFL 124
Query: 221 RGENGDLRVGVRRLARXXXXXXXXXXXXXXXHLGVLATASHAVLTCTMFVVYYKPRTSQF 280
RGE GDLRVGVRRLA+ LGVLATASHAV T T+FVV+YKPR SQF
Sbjct: 125 RGETGDLRVGVRRLAKQQSTMPASVISSQSMRLGVLATASHAVTTTTIFVVFYKPRISQF 184
Query: 281 IIGVNKYLEALTNKFSVGMRFKMRFEVEDSPERRFSGTIVDVGDVSPGWSNSQWRSLKVQ 340
II VNKY+ A+ N FS+GMR++MRFE E+SPER F+GTI+ GD+S W S+WRSL++Q
Sbjct: 185 IISVNKYMMAMKNGFSLGMRYRMRFEGEESPERIFTGTIIGSGDLSSQWPASKWRSLQIQ 244
Query: 341 WDEPASIPRPERVSSWEIEPFVAST-TSNVTEPLVKSKRTRPPEVSSSEIALNSPFSTFW 399
WDEP+SI RP +VS WEIEPF S T T+ KSKR+RP SEI SP ++ +
Sbjct: 245 WDEPSSIQRPNKVSPWEIEPFSPSALTPTPTQQQSKSKRSRP----ISEIT-GSPVASSF 299
Query: 400 YHGPSLSHEPTQLGGAAEPENNENRVVRSLKGQREINGNPHLNLSSNFINPEPKNNKDVA 459
S SHE NP + L F +P + N + +
Sbjct: 300 LSSFSQSHE----------------------------SNPSVKLL--FQDPATERNSNKS 329
Query: 460 ALSSA--CGY--YPVSSRPNDGSAHDQVESGKKTENSMDCWVFGVNLTT-----TFPNVD 510
SS C PV+S C +FG +LT+ T P+ D
Sbjct: 330 VFSSGLQCKITEAPVTS---------------------SCRLFGFDLTSKPASATIPH-D 367
Query: 511 KELGCQVIIPSGPNDPLPIAACETETEGGHNPNYSVSNKEQKQIISDASLNERQNKQVSI 570
K+L + + S +D T +PN S S KEQKQ S
Sbjct: 368 KQL---ISVDSNISD---------STTKCQDPNSSNSPKEQKQQTST------------- 402
Query: 571 PSLRTRTKVQMQGIAVGRAVDLTMLKDYDDLIDELEKLFDIKGELRVQNKWNIAFTDYAN 630
R+R KVQMQG AVGRAVDLT+L+ YD+LI ELEK+F+I+GEL ++KW I FTD
Sbjct: 403 ---RSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGELSPKDKWAIVFTDDEG 459
Query: 631 DMMLVGDHPWQEFCTIVKRISIYAREDV-KMKCK 663
D MLVGD PW EFC + K++ IY ++V KM+ K
Sbjct: 460 DRMLVGDDPWNEFCKMAKKLFIYPSDEVKKMRSK 493
>AT1G35540.1 | Symbols: ARF14 | auxin response factor 14 |
chr1:13108634-13111700 FORWARD LENGTH=605
Length = 605
Score = 483 bits (1242), Expect = e-136, Method: Compositional matrix adjust.
Identities = 290/655 (44%), Positives = 385/655 (58%), Gaps = 75/655 (11%)
Query: 19 GDDDQLDTELWKLCAGPLVDVPRSGERVFYFPQGHMEQLQASTNQEGNLDLNQQFPHFNL 78
G + +LWKLCAGPL D+P+ GE+V+YFPQGH+E ++AST +E LN+ P +
Sbjct: 19 GSKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREE----LNELQPICDF 74
Query: 79 PSKILCRVVHIQLLAEQESDEVYARITLIPESNQSEPTCPDSTQPETQ-KHKFHSFSKIL 137
PSK+ CRV+ IQL E SDE YA ITL+P++ Q P TQ + Q + +SF+K+L
Sbjct: 75 PSKLQCRVIAIQLKVENNSDETYAEITLMPDTTQV--VIP--TQNQNQFRPLVNSFTKVL 130
Query: 138 TASDTSTHGGFSVLRRHATECLPQLDMTQAIPTQELAAKDLHGFEWKFKHIFRGQPRRHL 197
TASDTS HGGFSV ++HA ECLP LDM+Q +PTQE+ A DLHG +W+F+HI+RG +RHL
Sbjct: 131 TASDTSVHGGFSVPKKHAIECLPPLDMSQPLPTQEILAIDLHGNQWRFRHIYRGTAQRHL 190
Query: 198 LTTGWSTFVTSKRLVAGDAFVFLRGENGDLRVGVRRLARXXXXXXXXXXXXXXXHLGVLA 257
LT GW+ F TSK+LV GD VF+RGE G+LRVG+RR G++A
Sbjct: 191 LTIGWNAFTTSKKLVEGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIVSIESMRHGIIA 250
Query: 258 TASHAVLTCTMFVVYYKPRTSQFIIGVNKYLEALTNKFSVGMRFKMRFEVEDSPERRFSG 317
+A HA MF+V YKPR+SQFI+ +K+L+ + NKF+VG RF MRFE +D ERR G
Sbjct: 251 SAKHAFDNQCMFIVVYKPRSSQFIVSYDKFLDVVNNKFNVGSRFTMRFEGDDFSERRSFG 310
Query: 318 TIVDVGDVSPGWSNSQWRSLKVQWDEPASIPRPERVSSWEIEPFVASTTSNVTE-PLVKS 376
TI+ V D SP W S+WRSL+VQWDE AS PRP +VS W+IE + SNV+ +K+
Sbjct: 311 TIIGVSDFSPHWKCSEWRSLEVQWDEFASFPRPNQVSPWDIEHL--TPWSNVSRSSFLKN 368
Query: 377 KRTRPP-EVSSSEIALNSPFSTFWYHGPSLSHEPTQLGGAAEPENNENRVVRSLKGQREI 435
KR+R E+ SS L P T G + + A P N R R+I
Sbjct: 369 KRSREVNEIGSSSSHLLPPTLT---QGQEIGQQ-----SMATPMNISLRY-------RDI 413
Query: 436 NGNPHLNLSSNFINPEPKNNKDVAALSSACGYYPVS--SRPNDGSAHDQVESGKKTENSM 493
+D S YPV ++ N + +E T
Sbjct: 414 -------------------TEDAMTPSRLLMSYPVQPMAKLNYNNVVTPIEENITTNAVA 454
Query: 494 DCWVFGVNLTTTFPNVDKELGCQVIIPSGPNDPLPIAACETETEGGHNPNYSVSNKEQKQ 553
+FGV+L T P+V K+ Q+ L I+ E + G Q Q
Sbjct: 455 SFRLFGVSLAT--PSVIKDPVEQI--------GLEISRLTQEKKFG-----------QSQ 493
Query: 554 IISDASLNERQNKQVSIPSLRTRTKVQMQGIAVGRAVDLTMLKDYDDLIDELEKLFDIKG 613
I+ S E Q+KQ S S RT TKVQMQG+ +GRAVDL++L YD LI ELEKLFD+KG
Sbjct: 494 ILR--SPTEIQSKQFS--STRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKG 549
Query: 614 ELRVQNKWNIAFTDYANDMMLVGDHPWQEFCTIVKRISIYAREDVK-MKCKHSGS 667
+L+ +N+W IAFT+ D MLVG+ PW EFC +VK+I IY++E+VK +K + S S
Sbjct: 550 QLQARNQWEIAFTNNEEDKMLVGEDPWPEFCNMVKKIFIYSKEEVKNLKSRKSLS 604
>AT1G34390.1 | Symbols: ARF22 | auxin response factor 22 |
chr1:12556005-12559082 FORWARD LENGTH=598
Length = 598
Score = 482 bits (1240), Expect = e-136, Method: Compositional matrix adjust.
Identities = 290/650 (44%), Positives = 381/650 (58%), Gaps = 75/650 (11%)
Query: 19 GDDDQLDTELWKLCAGPLVDVPRSGERVFYFPQGHMEQLQASTNQEGNLDLNQQFPHFNL 78
G + +LWKLCAGPL D+P+ GE+++YFPQG++E ++AST +E LN+ P +L
Sbjct: 19 GSKSYMYEQLWKLCAGPLCDIPKLGEKIYYFPQGNIELVEASTREE----LNELKPICDL 74
Query: 79 PSKILCRVVHIQLLAEQESDEVYARITLIPESNQSEPTCPDSTQPETQ-KHKFHSFSKIL 137
PSK+ CRV+ IQL E SDE YA ITL+P++ Q P TQ E Q + +SF+K+L
Sbjct: 75 PSKLQCRVIAIQLKVENNSDETYAEITLMPDTTQV--VIP--TQNENQFRPLVNSFTKVL 130
Query: 138 TASDTSTHGGFSVLRRHATECLPQLDMTQAIPTQELAAKDLHGFEWKFKHIFRGQPRRHL 197
TASDTS GGF V ++HA ECLP LDM+Q +PTQEL A DLHG +W+F H +RG P+RHL
Sbjct: 131 TASDTS--GGFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGTPQRHL 188
Query: 198 LTTGWSTFVTSKRLVAGDAFVFLRGENGDLRVGVRRLARXXXXXXXXXXXXXXXHLGVLA 257
LTTGW+ F TSK+LVAGD VF+RGE G+LRVG+RR GV+A
Sbjct: 189 LTTGWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIISIESMRHGVIA 248
Query: 258 TASHAVLTCTMFVVYYKPRTSQFIIGVNKYLEALTNKFSVGMRFKMRFEVEDSPERRFSG 317
+A HA MF+V YKPR+SQFI+ +K+L+A+ NKF+VG RF MRFE +D ERR+ G
Sbjct: 249 SAKHAFDNQCMFIVVYKPRSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYFG 308
Query: 318 TIVDVGDVSPGWSNSQWRSLKVQWDEPASIPRPERVSSWEIEPFVASTTSNVTEP-LVKS 376
TI+ V D SP W S+WR+L+VQWDE AS RP +VS WEIE + + NV P L+K+
Sbjct: 309 TIIGVSDFSPHWKCSEWRNLEVQWDEFASFSRPNKVSPWEIEHLMPAL--NVPRPSLLKN 366
Query: 377 KRTRPP-EVSSSEIALNSPFSTFWYHGPSLSHEPTQLGGAAEPENNENRVVRSLKGQREI 435
KR R E+ SS L P T E QL A P N + + + E
Sbjct: 367 KRLREVNEIGSSSSHLLPPILT-------QGQEIGQL-SVASPMN----ISLTYRDTTED 414
Query: 436 NGNPHLNLSSNFINPEPKNNKDVAALSSACGYYPVSSRPNDGSAHDQVESGKKTENSMDC 495
NP L S + P PK N + ++ Q+E T+ +
Sbjct: 415 VMNPSRLLMSYPVQPMPKLNYNNQMVT-------------------QIEENITTKTGTNF 455
Query: 496 WVFGVNLTTTFPNVDKELGCQVIIPSGPNDPLPIAACETE--TEGGHNPNYSVSNKEQKQ 553
+FGV+L T PS DP+ E TEG K+ Q
Sbjct: 456 RLFGVSLVT---------------PSVIKDPIEEIGSEISKLTEG----------KKFGQ 490
Query: 554 IISDASLNERQNKQVSIPSLRTRTKVQMQGIAVGRAVDLTMLKDYDDLIDELEKLFDIKG 613
+ S E Q+KQ S S RT TKVQMQG+ + RAVDL++L YD LI ELE+LFD+KG
Sbjct: 491 SQTLRSPTEIQSKQFS--STRTCTKVQMQGVTIERAVDLSVLNGYDQLILELEELFDLKG 548
Query: 614 ELRVQNKWNIAFTDYANDMMLVGDHPWQEFCTIVKRISIYAREDVKMKCK 663
+L+ +N+W IAFTD +D MLVGD PW EFC +VK+I I+ R K++ +
Sbjct: 549 QLQTRNQWEIAFTDSDDDKMLVGDDPWPEFCNMVKKILIFKRGGQKLEVQ 598
>AT1G34410.1 | Symbols: ARF21 | auxin response factor 21 |
chr1:12577722-12580824 FORWARD LENGTH=606
Length = 606
Score = 478 bits (1229), Expect = e-135, Method: Compositional matrix adjust.
Identities = 287/644 (44%), Positives = 375/644 (58%), Gaps = 69/644 (10%)
Query: 19 GDDDQLDTELWKLCAGPLVDVPRSGERVFYFPQGHMEQLQASTNQEGNLDLNQQFPHFNL 78
G + +LWKLCAGPL D+P+ GE V+YFPQG++E +QAST +E LN+ P +L
Sbjct: 19 GSKSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVQASTREE----LNELQPICDL 74
Query: 79 PSKILCRVVHIQLLAEQESDEVYARITLIPESNQSEPTCPDSTQPETQ-KHKFHSFSKIL 137
PSK+ CRV+ I L E SDE+YA ITL+P++ Q P TQ E + + +SF+K+L
Sbjct: 75 PSKLQCRVIAIHLKVENNSDEIYAEITLMPDTTQV--VIP--TQSENRFRPLVNSFTKVL 130
Query: 138 TASDTSTHGGFSVLRRHATECLPQLDMTQAIPTQELAAKDLHGFEWKFKHIFRGQPRRHL 197
TASDTS +GGFSV ++HA ECLP LDM+Q +P QE+ A DLH +W+F+H +RG P+RH
Sbjct: 131 TASDTSAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHS 190
Query: 198 LTTGWSTFVTSKRLVAGDAFVFLRGENGDLRVGVRRLARXXXXXXXXXXXXXXXHLGVLA 257
LTTGW+ F+TSK+LV GD VF+RGE G+LRVG+RR GV+A
Sbjct: 191 LTTGWNEFITSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIA 250
Query: 258 TASHAVLTCTMFVVYYKPRTSQFIIGVNKYLEALTNKFSVGMRFKMRFEVEDSPERRFSG 317
+A HA +F+V YKPR+SQFI+ +K+L+A+ NKF+VG RF MRFE +D ERR+ G
Sbjct: 251 SAKHAFDNQCIFIVVYKPRSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYFG 310
Query: 318 TIVDVGDVSPGWSNSQWRSLKVQWDEPASIPRPERVSSWEIEPFVASTTSNV-TEPLVKS 376
TI+ V D SP W S+WRSL+VQWDE AS RP +VS WEIE V + NV L+K+
Sbjct: 311 TIIGVSDFSPHWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLVPAL--NVPRSSLLKN 368
Query: 377 KRTRPP-EVSSSEIALNSPFSTFWYHGPSLSHEPTQLGGAAEPENNENRVVRSLKGQREI 435
KR R E SS L P T E QL A P N R + E
Sbjct: 369 KRLREVNEFGSSSSHLLPPILT-------QGQEIGQL-SVASPMNISLR----YRDTTEA 416
Query: 436 NGNPHLNLSSNFINPEPKNNKDVAALSSACGYYPVSSRPNDGSAHDQVESGKKTENSMDC 495
NP L S + P PK N + ++ Q+E T+ +
Sbjct: 417 AMNPSRLLMSYPVQPMPKLNYNNQMVT-------------------QIEENITTKAGTNF 457
Query: 496 WVFGVNLTTTFPNVDKELGCQVIIPSGPNDPLPIAACETETEGGHNPNYSVSNKEQKQII 555
+FGV L T P DP+ + G + + K+ Q
Sbjct: 458 RLFGVTLDT---------------PPMIKDPI--------KQIGSDISKLTERKKFGQSQ 494
Query: 556 SDASLNERQNKQVSIPSLRTRTKVQMQGIAVGRAVDLTMLKDYDDLIDELEKLFDIKGEL 615
+ S E Q+KQ S S RT TKVQMQG+ +GRAVDL++L YD LI ELEKLFDIKG+L
Sbjct: 495 TLRSPIEIQSKQFS--SSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQL 552
Query: 616 RVQNKWNIAFTDYANDMMLVGDHPWQEFCTIVKRISIYAREDVK 659
+ +N+W IAFTD MLVGD PW EFC +VK+I IY++E+VK
Sbjct: 553 QTRNQWKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVK 596
>AT1G34310.1 | Symbols: ARF12 | auxin response factor 12 |
chr1:12508548-12511520 REVERSE LENGTH=593
Length = 593
Score = 471 bits (1213), Expect = e-133, Method: Compositional matrix adjust.
Identities = 286/642 (44%), Positives = 366/642 (57%), Gaps = 73/642 (11%)
Query: 19 GDDDQLDTELWKLCAGPLVDVPRSGERVFYFPQGHMEQLQASTNQEGNLDLNQQFPHFNL 78
G + +LWKLCAGPL D+P+ GE+V+YFPQGH+E ++ ST +E LN+ P +L
Sbjct: 19 GSKSYVYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVETSTREE----LNELQPICDL 74
Query: 79 PSKILCRVVHIQLLAEQESDEVYARITLIPESNQSEPTCPDSTQPETQ-KHKFHSFSKIL 137
PSK+ CRV+ I L E SDE YA ITL+P++ Q P TQ E Q + +SF+K+L
Sbjct: 75 PSKLQCRVIAIHLKVENNSDETYAEITLMPDTTQV--VIP--TQNENQFRPLVNSFTKVL 130
Query: 138 TASDTSTHGGFSVLRRHATECLPQLDMTQAIPTQELAAKDLHGFEWKFKHIFRGQPRRHL 197
TASDTS HGGF V ++HA ECLP LDM+Q +P QEL A DLHG +W+F H +RG P+RHL
Sbjct: 131 TASDTSAHGGFFVPKKHAIECLPSLDMSQPLPAQELLAIDLHGNQWRFNHNYRGTPQRHL 190
Query: 198 LTTGWSTFVTSKRLVAGDAFVFLRGENGDLRVGVRRLARXXXXXXXXXXXXXXXHLGVLA 257
LTTGW+ F TSK+LVAGD VF+RGE G+LRVG+RR GV+A
Sbjct: 191 LTTGWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVVA 250
Query: 258 TASHAVLTCTMFVVYYKPRTSQFIIGVNKYLEALTNKFSVGMRFKMRFEVEDSPERRFSG 317
+A HA MF V YKPR+S+FI+ +K+L+A+ NKF+VG RF MR E +D ERR G
Sbjct: 251 SAKHAFDNQCMFTVVYKPRSSKFIVSYDKFLDAVNNKFNVGSRFTMRLEGDDFSERRCFG 310
Query: 318 TIVDVGDVSPGWSNSQWRSLKVQWDEPASIPRPERVSSWEIEPFVASTTSNVTEP-LVKS 376
TI+ V D SP W S+WRSL+VQWDE S P P++VS W+IE + + NV L+K+
Sbjct: 311 TIIGVSDFSPHWKCSEWRSLEVQWDEFTSFPGPKKVSPWDIEHLMPAI--NVPRSFLLKN 368
Query: 377 KRTRPP-EVSSSEIALNSPFSTFWYHGPSLSHEPTQLGGAAEPENNENRVVRSLKGQREI 435
KR R E+ SS L P T LS A P N R + E
Sbjct: 369 KRLREVNEIGSSSSHLLPPILTQGQENEQLS--------VASPMNISLR----YRDATED 416
Query: 436 NGNPHLNLSSNFINPEPKNNKDVAALSSACGYYPVSSRPNDGSAHDQVESGKKTENSMDC 495
NP L S + P PK N + ++ ++E T+ +
Sbjct: 417 AMNPSKLLMSYPVQPMPKLNYNNQMVT-------------------EMEENITTKTGTNF 457
Query: 496 WVFGVNLTTTFPNVDKELGCQVIIPSGPNDPLPIAACETE--TEGGHNPNYSVSNKEQKQ 553
+FGV L T P DP+ E TEG + +S +
Sbjct: 458 RLFGVTLDT---------------PPVIKDPIEEIGSEISKLTEGK---KFGLSQTLR-- 497
Query: 554 IISDASLNERQNKQVSIPSLRTRTKVQMQGIAVGRAVDLTMLKDYDDLIDELEKLFDIKG 613
S E QNKQ S S RT TKVQMQG+ +GRAVDL++L YD LI ELEKLFDIKG
Sbjct: 498 -----SPTEIQNKQFS--SSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKG 550
Query: 614 ELRVQNKWNIAFTDYANDMMLVGDHPWQEFCTIVKRISIYAR 655
+L+ +N+W IAFTD D MLVGD PW EFC +VK+I I R
Sbjct: 551 QLQTRNQWEIAFTDSDEDKMLVGDDPWPEFCNMVKKIFIQKR 592
>AT1G35520.1 | Symbols: ARF15 | auxin response factor 15 |
chr1:13082819-13085830 REVERSE LENGTH=598
Length = 598
Score = 462 bits (1188), Expect = e-130, Method: Compositional matrix adjust.
Identities = 279/633 (44%), Positives = 364/633 (57%), Gaps = 66/633 (10%)
Query: 27 ELWKLCAGPLVDVPRSGERVFYFPQGHMEQLQASTNQEGNLDLNQQFPHFNLPSKILCRV 86
+LWKLCAGPL D+P+ GE+V+YFPQG++E ++AST +E LN+ P +LPSK+ CRV
Sbjct: 27 QLWKLCAGPLCDIPKLGEKVYYFPQGNIELVEASTREE----LNELQPICDLPSKLQCRV 82
Query: 87 VHIQLLAEQESDEVYARITLIPESNQSEPT-CPDSTQPETQ-KHKFHSFSKILTASDTST 144
+ I L E SDE YA+ITL+P++ SE TQ E Q + +SF+K+LTASD S
Sbjct: 83 IAIHLKVENNSDETYAKITLMPDTTVSENLQVVIPTQNENQFRPLVNSFTKVLTASDISA 142
Query: 145 HGGFSVLRRHATECLPQLDMTQAIPTQELAAKDLHGFEWKFKHIFRGQPRRHLLTTGWST 204
+G FSV ++HA ECLP LDM+Q +P QEL A DLHG +W F+H +RG P+RHLLTTGW+
Sbjct: 143 NGVFSVPKKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSFRHSYRGTPQRHLLTTGWNE 202
Query: 205 FVTSKRLVAGDAFVFLRGENGDLRVGVRRLARXXXXXXXXXXXXXXXHLGVLATASHAVL 264
F TSK+LV GD VF+RGE G+LRVG+RR GV+A+A HA
Sbjct: 203 FTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHAFD 262
Query: 265 TCTMFVVYYKPRTSQFIIGVNKYLEALTNKFSVGMRFKMRFEVEDSPERRFSGTIVDVGD 324
MF+V YKPR+SQFI+ +K+L+A+ NKF+VG RF MRFE +D ERR+ GTI+ V +
Sbjct: 263 NQCMFIVVYKPRSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDLSERRYFGTIIGVSN 322
Query: 325 VSPGWSNSQWRSLKVQWDEPASIPRPERVSSWEIEPFVASTTSNV-TEPLVKSKRTRPP- 382
SP W S WRSL+VQWDE AS RP +VS WEIE + + NV +K+KR R
Sbjct: 323 FSPHWKCSDWRSLEVQWDEFASFLRPNKVSPWEIEHLMPAL--NVPRSSFLKNKRLREVN 380
Query: 383 EVSSSEIALNSPFSTFWYHGPSLSHEPTQLGGAAEPENNENRVVRSLKGQREINGNPHLN 442
E SS L P T E QL A P N + + E NP
Sbjct: 381 EFGSSSSHLLPPILT-------QGQEIGQL-SVASPMN----ISLLYRETTEDAMNPSRL 428
Query: 443 LSSNFINPEPKNNKDVAALSSACGYYPVSSRPNDGSAHDQVESGKKTENSMDCWVFGVNL 502
L S + P PK N + ++ Q+E T+ + +FGV+L
Sbjct: 429 LMSYPVQPMPKRNYNNQMVT-------------------QIEENITTKAGTNFRLFGVSL 469
Query: 503 TTTFPNVDKELGCQVIIPSGPNDPLPIAACETETEGGHNPNYSVSNKEQKQIISDASLNE 562
T P DP+ + G + + K+ Q + S +
Sbjct: 470 AT---------------PPVIKDPI--------EQIGSDISKLTEGKKFGQSQTLRSPTK 506
Query: 563 RQNKQVSIPSLRTRTKVQMQGIAVGRAVDLTMLKDYDDLIDELEKLFDIKGELRVQNKWN 622
Q+KQ S S RT TKVQMQG+ +GRAVDL++L YD LI ELEKLFD+KG+L+ +N+W
Sbjct: 507 IQSKQFS--STRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQTRNQWK 564
Query: 623 IAFTDYANDMMLVGDHPWQEFCTIVKRISIYAR 655
I FT D MLVGD PW EFC +VKRI I R
Sbjct: 565 IIFTGSDEDEMLVGDDPWPEFCNMVKRIYIQKR 597
>AT1G35240.1 | Symbols: ARF20 | auxin response factor 20 |
chr1:12927457-12930523 REVERSE LENGTH=590
Length = 590
Score = 456 bits (1172), Expect = e-128, Method: Compositional matrix adjust.
Identities = 280/645 (43%), Positives = 367/645 (56%), Gaps = 87/645 (13%)
Query: 19 GDDDQLDTELWKLCAGPLVDVPRSGERVFYFPQGHMEQLQASTNQEGNLDLNQQFPHFNL 78
G + +LWKLCAGPL D+P+ GE V+YFPQG++E + AST +E LN+ P +L
Sbjct: 19 GSKSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVDASTREE----LNELQPICDL 74
Query: 79 PSKILCRVVHIQLLAEQESDEVYARITLIPESNQSEPTCPDSTQPETQ-KHKFHSFSKIL 137
PSK+ CRV+ I L E SDE YA ITL+P++ Q P TQ E Q + +SF+K+L
Sbjct: 75 PSKLQCRVIAIHLKVENNSDETYAEITLMPDTTQV--VIP--TQSENQFRPLVNSFTKVL 130
Query: 138 TASDTSTHGGFSVLRRHATECLPQLDMTQAIPTQELAAKDLHGFEWKFKHIFRGQPRRHL 197
TASDTS +GGF V ++HA ECLP L +P QEL AKDLHG +W+F+H +RG P+RH
Sbjct: 131 TASDTSAYGGFFVPKKHAIECLPPL----PLPAQELLAKDLHGNQWRFRHSYRGTPQRHS 186
Query: 198 LTTGWSTFVTSKRLVAGDAFVFLRGENGDLRVGVRRLARXXXXXXXXXXXXXXXHLGVLA 257
LTTGW+ F TSK+LV GD VF+RGE G+LRVG+RR GV+A
Sbjct: 187 LTTGWNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIA 246
Query: 258 TASHAVLTCTMFVVYYKP--RTSQFIIGVNKYLEALTNKFSVGMRFKMRFEVEDSPERRF 315
+A HA+ +F+V YKP R+SQFI+ +K+L+A+ NKF VG RF MRFE +D ERR+
Sbjct: 247 SAKHALDNQCIFIVVYKPSIRSSQFIVSYDKFLDAMNNKFIVGSRFTMRFEGDDFSERRY 306
Query: 316 SGTIVDVGDVSPGWSNSQWRSLKVQWDEPASIPRPERVSSWEIEPFVASTTSNV-TEPLV 374
GTI+ V D SP W S+WRSL+VQWDE AS RP +VS WEIE +++ NV L+
Sbjct: 307 FGTIIGVNDFSPHWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLMSAL--NVPRSSLL 364
Query: 375 KSKRTRPPEVSSSEIALNSPFSTFWYHGPSLSHEPTQLGGAAEPENNENRVVRSLKGQRE 434
K+KR R EV+ E QL A P N R + E
Sbjct: 365 KNKRLR--EVN------------------EFGQEIGQL-SVASPMNTSLR----YRDTTE 399
Query: 435 INGNPHLNLSSNFINPEPKNNKDVAALSSACGYYPVSSRPNDGSAHDQVESGKKTENSMD 494
NP L S + P PK N + ++ Q+E T+ +
Sbjct: 400 DAMNPSRLLMSYPVQPMPKLNYNNQMVT-------------------QIEENITTKAVTN 440
Query: 495 CWVFGVNLTTTFPNVDKELGCQVIIPSGPNDPLPIAACETETEGGHNPNYSVSNKEQKQI 554
+FGV+L IP DP+ E G + + K+ Q
Sbjct: 441 FRLFGVSLA---------------IPLVIKDPI--------EEIGSDISKLTEGKKFGQS 477
Query: 555 ISDASLNERQNKQVSIPSLRTRTKVQMQGIAVGRAVDLTMLKDYDDLIDELEKLFDIKGE 614
+ S E Q+KQ S RT TKVQMQG+ +GRAVDL++L YD LI ELEKLFD+KG+
Sbjct: 478 QTLRSPIEIQSKQFG--STRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQ 535
Query: 615 LRVQNKWNIAFTDYANDMMLVGDHPWQEFCTIVKRISIYAREDVK 659
L+ +N+W IAFTD MLVGD PW EFC +VK+I IY++E+VK
Sbjct: 536 LQTRNQWKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVK 580
>AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 452 bits (1162), Expect = e-127, Method: Compositional matrix adjust.
Identities = 226/398 (56%), Positives = 282/398 (70%), Gaps = 15/398 (3%)
Query: 5 KGAHLRGTTEETGLGDDDQLDTELWKLCAGPLVDVPRSGERVFYFPQGHMEQLQASTNQE 64
K R E L + L ELW CAGPLV VPR +RVFYFPQGH+EQ++ASTNQ
Sbjct: 39 KSNSTRSAAAERALDPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQA 98
Query: 65 GNLDLNQQFPHFNLPSKILCRVVHIQLLAEQESDEVYARITLIPESNQSEPTC-PDSTQP 123
QQ P ++LPSK+LCRV+++ L AE ++DEVYA+ITL+PE+NQ E ++ P
Sbjct: 99 AE----QQMPLYDLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLP 154
Query: 124 ETQKHKFHSFSKILTASDTSTHGGFSVLRRHATECLPQLDMTQAIPTQELAAKDLHGFEW 183
+ + HSF K LTASDTSTHGGFSVLRRHA ECLP LDM++ PTQEL AKDLH EW
Sbjct: 155 PPPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEW 214
Query: 184 KFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGDLRVGVRRLARXXXXXXX 243
+F+HIFRGQPRRHLL +GWS FV+SKRLVAGDAF+FLRGENG+LRVGVRR R
Sbjct: 215 RFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPS 274
Query: 244 XXXXXXXXHLGVLATASHAVLTCTMFVVYYKPRT--SQFIIGVNKYLEALTNKFSVGMRF 301
HLGVLATA HA+ T TMF VYYKPRT S+FI+ ++Y+E++ N +S+GMRF
Sbjct: 275 SVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRF 334
Query: 302 KMRFEVEDSPERRFSGTIVDVGDVSPG-WSNSQWRSLKVQWDEPASIPRPERVSSWEIEP 360
KMRFE E++PE+RF+GTIV + + P W S+WRSLKV+WDE +SIPRP+RVS W++EP
Sbjct: 335 KMRFEGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEP 394
Query: 361 FVASTTSNVTEPLVKSKRTRPPEVSSSEIALNSPFSTF 398
+A + P+ + KR R S IA +SP S+
Sbjct: 395 ALAPPALSPV-PMPRPKRPR------SNIAPSSPDSSM 425
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 110/204 (53%), Gaps = 11/204 (5%)
Query: 482 QVESGKKTENSMDCWVFGVNLTTTFPNVDKELGCQVIIPSGPNDPL---PIAACETETEG 538
Q E+ K E +C +FG+ LT D + + + ND IA+ + +
Sbjct: 643 QEETAKSREG--NCRLFGIPLTNNMNGTDSTMSQRNNL----NDAAGLTQIASPKVQDLS 696
Query: 539 GHNPNYSVSNKEQKQIISDASLNER-QNKQVSIPSLRTRTKVQMQGIAVGRAVDLTMLKD 597
+ +N ++Q + N ++ Q S R+ TKV QGIA+GR+VDL+ ++
Sbjct: 697 DQSKGSKSTNDHREQGRPFQTNNPHPKDAQTKTNSSRSCTKVHKQGIALGRSVDLSKFQN 756
Query: 598 YDDLIDELEKLFDIKGELRVQNK-WNIAFTDYANDMMLVGDHPWQEFCTIVKRISIYARE 656
Y++L+ EL++LF+ GEL K W I +TD NDMMLVGD PWQEFC +V++I IY +E
Sbjct: 757 YEELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKE 816
Query: 657 DVKMKCKHSGSWSECEETLLSQDS 680
+V+ + S EE ++ + S
Sbjct: 817 EVRKMNPGTLSCRSEEEAVVGEGS 840
>AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 452 bits (1162), Expect = e-127, Method: Compositional matrix adjust.
Identities = 226/398 (56%), Positives = 282/398 (70%), Gaps = 15/398 (3%)
Query: 5 KGAHLRGTTEETGLGDDDQLDTELWKLCAGPLVDVPRSGERVFYFPQGHMEQLQASTNQE 64
K R E L + L ELW CAGPLV VPR +RVFYFPQGH+EQ++ASTNQ
Sbjct: 39 KSNSTRSAAAERALDPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQA 98
Query: 65 GNLDLNQQFPHFNLPSKILCRVVHIQLLAEQESDEVYARITLIPESNQSEPTC-PDSTQP 123
QQ P ++LPSK+LCRV+++ L AE ++DEVYA+ITL+PE+NQ E ++ P
Sbjct: 99 AE----QQMPLYDLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLP 154
Query: 124 ETQKHKFHSFSKILTASDTSTHGGFSVLRRHATECLPQLDMTQAIPTQELAAKDLHGFEW 183
+ + HSF K LTASDTSTHGGFSVLRRHA ECLP LDM++ PTQEL AKDLH EW
Sbjct: 155 PPPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEW 214
Query: 184 KFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGDLRVGVRRLARXXXXXXX 243
+F+HIFRGQPRRHLL +GWS FV+SKRLVAGDAF+FLRGENG+LRVGVRR R
Sbjct: 215 RFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPS 274
Query: 244 XXXXXXXXHLGVLATASHAVLTCTMFVVYYKPRT--SQFIIGVNKYLEALTNKFSVGMRF 301
HLGVLATA HA+ T TMF VYYKPRT S+FI+ ++Y+E++ N +S+GMRF
Sbjct: 275 SVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRF 334
Query: 302 KMRFEVEDSPERRFSGTIVDVGDVSPG-WSNSQWRSLKVQWDEPASIPRPERVSSWEIEP 360
KMRFE E++PE+RF+GTIV + + P W S+WRSLKV+WDE +SIPRP+RVS W++EP
Sbjct: 335 KMRFEGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEP 394
Query: 361 FVASTTSNVTEPLVKSKRTRPPEVSSSEIALNSPFSTF 398
+A + P+ + KR R S IA +SP S+
Sbjct: 395 ALAPPALSPV-PMPRPKRPR------SNIAPSSPDSSM 425
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 110/204 (53%), Gaps = 11/204 (5%)
Query: 482 QVESGKKTENSMDCWVFGVNLTTTFPNVDKELGCQVIIPSGPNDPL---PIAACETETEG 538
Q E+ K E +C +FG+ LT D + + + ND IA+ + +
Sbjct: 643 QEETAKSREG--NCRLFGIPLTNNMNGTDSTMSQRNNL----NDAAGLTQIASPKVQDLS 696
Query: 539 GHNPNYSVSNKEQKQIISDASLNER-QNKQVSIPSLRTRTKVQMQGIAVGRAVDLTMLKD 597
+ +N ++Q + N ++ Q S R+ TKV QGIA+GR+VDL+ ++
Sbjct: 697 DQSKGSKSTNDHREQGRPFQTNNPHPKDAQTKTNSSRSCTKVHKQGIALGRSVDLSKFQN 756
Query: 598 YDDLIDELEKLFDIKGELRVQNK-WNIAFTDYANDMMLVGDHPWQEFCTIVKRISIYARE 656
Y++L+ EL++LF+ GEL K W I +TD NDMMLVGD PWQEFC +V++I IY +E
Sbjct: 757 YEELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKE 816
Query: 657 DVKMKCKHSGSWSECEETLLSQDS 680
+V+ + S EE ++ + S
Sbjct: 817 EVRKMNPGTLSCRSEEEAVVGEGS 840
>AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 452 bits (1162), Expect = e-127, Method: Compositional matrix adjust.
Identities = 226/398 (56%), Positives = 282/398 (70%), Gaps = 15/398 (3%)
Query: 5 KGAHLRGTTEETGLGDDDQLDTELWKLCAGPLVDVPRSGERVFYFPQGHMEQLQASTNQE 64
K R E L + L ELW CAGPLV VPR +RVFYFPQGH+EQ++ASTNQ
Sbjct: 39 KSNSTRSAAAERALDPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQA 98
Query: 65 GNLDLNQQFPHFNLPSKILCRVVHIQLLAEQESDEVYARITLIPESNQSEPTC-PDSTQP 123
QQ P ++LPSK+LCRV+++ L AE ++DEVYA+ITL+PE+NQ E ++ P
Sbjct: 99 AE----QQMPLYDLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLP 154
Query: 124 ETQKHKFHSFSKILTASDTSTHGGFSVLRRHATECLPQLDMTQAIPTQELAAKDLHGFEW 183
+ + HSF K LTASDTSTHGGFSVLRRHA ECLP LDM++ PTQEL AKDLH EW
Sbjct: 155 PPPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEW 214
Query: 184 KFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGDLRVGVRRLARXXXXXXX 243
+F+HIFRGQPRRHLL +GWS FV+SKRLVAGDAF+FLRGENG+LRVGVRR R
Sbjct: 215 RFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPS 274
Query: 244 XXXXXXXXHLGVLATASHAVLTCTMFVVYYKPRT--SQFIIGVNKYLEALTNKFSVGMRF 301
HLGVLATA HA+ T TMF VYYKPRT S+FI+ ++Y+E++ N +S+GMRF
Sbjct: 275 SVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRF 334
Query: 302 KMRFEVEDSPERRFSGTIVDVGDVSPG-WSNSQWRSLKVQWDEPASIPRPERVSSWEIEP 360
KMRFE E++PE+RF+GTIV + + P W S+WRSLKV+WDE +SIPRP+RVS W++EP
Sbjct: 335 KMRFEGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEP 394
Query: 361 FVASTTSNVTEPLVKSKRTRPPEVSSSEIALNSPFSTF 398
+A + P+ + KR R S IA +SP S+
Sbjct: 395 ALAPPALSPV-PMPRPKRPR------SNIAPSSPDSSM 425
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 110/204 (53%), Gaps = 11/204 (5%)
Query: 482 QVESGKKTENSMDCWVFGVNLTTTFPNVDKELGCQVIIPSGPNDPL---PIAACETETEG 538
Q E+ K E +C +FG+ LT D + + + ND IA+ + +
Sbjct: 643 QEETAKSREG--NCRLFGIPLTNNMNGTDSTMSQRNNL----NDAAGLTQIASPKVQDLS 696
Query: 539 GHNPNYSVSNKEQKQIISDASLNER-QNKQVSIPSLRTRTKVQMQGIAVGRAVDLTMLKD 597
+ +N ++Q + N ++ Q S R+ TKV QGIA+GR+VDL+ ++
Sbjct: 697 DQSKGSKSTNDHREQGRPFQTNNPHPKDAQTKTNSSRSCTKVHKQGIALGRSVDLSKFQN 756
Query: 598 YDDLIDELEKLFDIKGELRVQNK-WNIAFTDYANDMMLVGDHPWQEFCTIVKRISIYARE 656
Y++L+ EL++LF+ GEL K W I +TD NDMMLVGD PWQEFC +V++I IY +E
Sbjct: 757 YEELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKE 816
Query: 657 DVKMKCKHSGSWSECEETLLSQDS 680
+V+ + S EE ++ + S
Sbjct: 817 EVRKMNPGTLSCRSEEEAVVGEGS 840
>AT5G62000.4 | Symbols: ARF2 | auxin response factor 2 |
chr5:24910859-24914873 FORWARD LENGTH=853
Length = 853
Score = 451 bits (1160), Expect = e-127, Method: Compositional matrix adjust.
Identities = 226/398 (56%), Positives = 282/398 (70%), Gaps = 15/398 (3%)
Query: 5 KGAHLRGTTEETGLGDDDQLDTELWKLCAGPLVDVPRSGERVFYFPQGHMEQLQASTNQE 64
K R E L + L ELW CAGPLV VPR +RVFYFPQGH+EQ++ASTNQ
Sbjct: 39 KSNSTRSAAAERALDPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQA 98
Query: 65 GNLDLNQQFPHFNLPSKILCRVVHIQLLAEQESDEVYARITLIPESNQSEPTC-PDSTQP 123
QQ P ++LPSK+LCRV+++ L AE ++DEVYA+ITL+PE+NQ E ++ P
Sbjct: 99 AE----QQMPLYDLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLP 154
Query: 124 ETQKHKFHSFSKILTASDTSTHGGFSVLRRHATECLPQLDMTQAIPTQELAAKDLHGFEW 183
+ + HSF K LTASDTSTHGGFSVLRRHA ECLP LDM++ PTQEL AKDLH EW
Sbjct: 155 PPPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEW 214
Query: 184 KFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGDLRVGVRRLARXXXXXXX 243
+F+HIFRGQPRRHLL +GWS FV+SKRLVAGDAF+FLRGENG+LRVGVRR R
Sbjct: 215 RFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPS 274
Query: 244 XXXXXXXXHLGVLATASHAVLTCTMFVVYYKPRT--SQFIIGVNKYLEALTNKFSVGMRF 301
HLGVLATA HA+ T TMF VYYKPRT S+FI+ ++Y+E++ N +S+GMRF
Sbjct: 275 SVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRF 334
Query: 302 KMRFEVEDSPERRFSGTIVDVGDVSPG-WSNSQWRSLKVQWDEPASIPRPERVSSWEIEP 360
KMRFE E++PE+RF+GTIV + + P W S+WRSLKV+WDE +SIPRP+RVS W++EP
Sbjct: 335 KMRFEGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEP 394
Query: 361 FVASTTSNVTEPLVKSKRTRPPEVSSSEIALNSPFSTF 398
+A + P+ + KR R S IA +SP S+
Sbjct: 395 ALAPPALSPV-PMPRPKRPR------SNIAPSSPDSSM 425
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 102/183 (55%), Gaps = 11/183 (6%)
Query: 482 QVESGKKTENSMDCWVFGVNLTTTFPNVDKELGCQVIIPSGPNDPL---PIAACETETEG 538
Q E+ K E +C +FG+ LT D + + + ND IA+ + +
Sbjct: 643 QEETAKSREG--NCRLFGIPLTNNMNGTDSTMSQRNNL----NDAAGLTQIASPKVQDLS 696
Query: 539 GHNPNYSVSNKEQKQIISDASLNER-QNKQVSIPSLRTRTKVQMQGIAVGRAVDLTMLKD 597
+ +N ++Q + N ++ Q S R+ TKV QGIA+GR+VDL+ ++
Sbjct: 697 DQSKGSKSTNDHREQGRPFQTNNPHPKDAQTKTNSSRSCTKVHKQGIALGRSVDLSKFQN 756
Query: 598 YDDLIDELEKLFDIKGELRVQNK-WNIAFTDYANDMMLVGDHPWQEFCTIVKRISIYARE 656
Y++L+ EL++LF+ GEL K W I +TD NDMMLVGD PWQEFC +V++I IY +E
Sbjct: 757 YEELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKE 816
Query: 657 DVK 659
+V+
Sbjct: 817 EVR 819
>AT1G34170.1 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12444265-12446764 REVERSE LENGTH=505
Length = 505
Score = 342 bits (876), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 192/486 (39%), Positives = 275/486 (56%), Gaps = 57/486 (11%)
Query: 27 ELWKLCAGPLVDVPRSGERVFYFPQGHMEQLQASTNQEGNLDLNQQFPHFNLPSKILCRV 86
+LW +CAGPL +P+ GE+V+YFPQGH+E ++ ST E L+ P F+LPSK+ CRV
Sbjct: 25 KLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDE----LDHIRPIFDLPSKLRCRV 80
Query: 87 VHIQLLAEQESDEVYARITLIPESNQSEPTCPDSTQPETQKHKFHSFSKILTASDTSTHG 146
V I ++ +DEVYA+I+L+P++ + +T +T++ + FSKILTASD S G
Sbjct: 81 VAIDRKVDKNTDEVYAQISLMPDTTE---VMTHNTTMDTRRPIVYFFSKILTASDVSLSG 137
Query: 147 GFSVLRRHATECLPQLDMTQAIPTQELAAKDLHGFEWKFKHIFRGQPRRHLLTTG--WST 204
G + +++A EC P LDM+Q I TQ L AKDL+G EW FKH+FRG P+RH+ T+G WS
Sbjct: 138 GLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSV 197
Query: 205 FVTSKRLVAGDAFVFLRGENGDLRVGVRRLARXXXXXXXXXXXXXXXHLGVLATASHAVL 264
F T+KRL+ GD FV LRGENG+LR G+RR GV+A+ +A
Sbjct: 198 FATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFK 257
Query: 265 TCTMFVVYYKPRTSQFIIGVNKYLEALTNKFSVGMRFKMRFEVEDSPERRFSGTIVDVGD 324
T MF V YKP +SQF+I +K+++A+ N + VG RF+M+FE +D E+R+ GTI+ V D
Sbjct: 258 TKCMFNVVYKPSSSQFVISYDKFVDAMNNNYIVGSRFRMQFEGKDFSEKRYDGTIIGVND 317
Query: 325 VSPGWSNSQWRSLKVQWDEPASIPRPERVSSWEIEPFVASTTSNVTEPLVKSKRTRPPEV 384
+SP W +S+WRSLKVQWDE + RP +VS W+IE + S S++++ +K K+
Sbjct: 318 MSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPS--SDISQSSLKKKK------ 369
Query: 385 SSSEIALNSPFSTFWYHGPSLSHEPTQLGGAAEPENNENRVVRSLKGQREINGNPHLNLS 444
W + + L E GQR +N
Sbjct: 370 -------------HWLQLNEIGATLSNLWTCQE------------IGQRSMN-------- 396
Query: 445 SNFINPE---PKNNKDVAALSSACGYYPVSSRPNDGSAHDQVESGKK----TENSMDCWV 497
S PE P +D LS + + + PN+ DQ+ +K TE + C +
Sbjct: 397 SPISVPEFSYPNAIEDSKFLSGLLLNHSLLAIPNENYNSDQMIQPRKEDITTEATTSCLL 456
Query: 498 FGVNLT 503
FGV+LT
Sbjct: 457 FGVDLT 462
>AT1G30330.1 | Symbols: ARF6 | auxin response factor 6 |
chr1:10686125-10690036 REVERSE LENGTH=933
Length = 933
Score = 317 bits (811), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 176/376 (46%), Positives = 238/376 (63%), Gaps = 15/376 (3%)
Query: 19 GDDDQLDTELWKLCAGPLVDVPRSGERVFYFPQGHMEQLQASTNQEGNLDLNQQFPHF-N 77
G+ L++ELW CAGPLV +P G RV YFPQGH EQ+ ASTN+E ++ P++ +
Sbjct: 15 GEKRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKE----VDAHIPNYPS 70
Query: 78 LPSKILCRVVHIQLLAEQESDEVYARITLIP--ESNQSEPTCP-DSTQPETQKHKFHSFS 134
L +++C++ ++ + A+ E+DEVYA++TL P Q +P P + P Q + F
Sbjct: 71 LHPQLICQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDPYLPAELGVPSRQPTNY--FC 128
Query: 135 KILTASDTSTHGGFSVLRRHATECLPQLDMTQAIPTQELAAKDLHGFEWKFKHIFRGQPR 194
K LTASDTSTHGGFSV RR A + P LD +Q P QEL A+DLH EWKF+HIFRGQP+
Sbjct: 129 KTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPK 188
Query: 195 RHLLTTGWSTFVTSKRLVAGDAFVFLRGENGDLRVGVRRLARXXXXXXXXXXXXXXXHLG 254
RHLLTTGWS FV++KRLVAGD+ +F+ + L +G+RR R HLG
Sbjct: 189 RHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLG 248
Query: 255 VLATASHAVLTCTMFVVYYKPRT--SQFIIGVNKYLEALTN-KFSVGMRFKMRFEVEDSP 311
+LA A+HA T + F ++Y PR S+F+I + KY++A+ + + SVGMRF+M FE E+S
Sbjct: 249 LLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESS 308
Query: 312 ERRFSGTIVDVGDVSPG-WSNSQWRSLKVQWDEPASIPRPERVSSWEIEPFVASTTSNVT 370
RR+ GTI + D+ P W+NS WRS+KV WDE + R RVS WEIEP
Sbjct: 309 VRRYMGTITGICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSP 368
Query: 371 EPLVKSKRTRPPEVSS 386
PL + KR PP + S
Sbjct: 369 FPL-RLKRPWPPGLPS 383
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 88/199 (44%), Gaps = 10/199 (5%)
Query: 470 VSSRPNDGSAHDQVESGKKTENSMDCWVFGVNLTTT---FPNVDKELGCQVIIPSGPNDP 526
VS P G +E + +FGVN+ ++ PN L + I G +
Sbjct: 691 VSLPPFPGGRECSIEQEGSASDPHSHLLFGVNIDSSSLLMPNGMSNLRS-IGIEGGDSTT 749
Query: 527 LPIAACETETEGGHNPNYSVSNKEQKQIISDASLNERQNKQVSIPSLRTRTKVQMQGIAV 586
LP + + N + + I L +N P T KV G +
Sbjct: 750 LPFTSSNFNNDFSGNLAMTTPSS---CIDESGFLQSSENLGSENPQSNTFVKVYKSG-SF 805
Query: 587 GRAVDLTMLKDYDDLIDELEKLFDIKGELR--VQNKWNIAFTDYANDMMLVGDHPWQEFC 644
GR++D++ Y +L EL ++F ++G+L V++ W + F D ND++L+GD PW EF
Sbjct: 806 GRSLDISKFSSYHELRSELARMFGLEGQLEDPVRSGWQLVFVDRENDVLLLGDDPWPEFV 865
Query: 645 TIVKRISIYAREDVKMKCK 663
+ V I I + ++V+ K
Sbjct: 866 SSVWCIKILSPQEVQQMGK 884
>AT1G30330.2 | Symbols: ARF6 | auxin response factor 6 |
chr1:10686125-10690036 REVERSE LENGTH=935
Length = 935
Score = 317 bits (811), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 176/376 (46%), Positives = 238/376 (63%), Gaps = 15/376 (3%)
Query: 19 GDDDQLDTELWKLCAGPLVDVPRSGERVFYFPQGHMEQLQASTNQEGNLDLNQQFPHF-N 77
G+ L++ELW CAGPLV +P G RV YFPQGH EQ+ ASTN+E ++ P++ +
Sbjct: 17 GEKRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKE----VDAHIPNYPS 72
Query: 78 LPSKILCRVVHIQLLAEQESDEVYARITLIP--ESNQSEPTCP-DSTQPETQKHKFHSFS 134
L +++C++ ++ + A+ E+DEVYA++TL P Q +P P + P Q + F
Sbjct: 73 LHPQLICQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDPYLPAELGVPSRQPTNY--FC 130
Query: 135 KILTASDTSTHGGFSVLRRHATECLPQLDMTQAIPTQELAAKDLHGFEWKFKHIFRGQPR 194
K LTASDTSTHGGFSV RR A + P LD +Q P QEL A+DLH EWKF+HIFRGQP+
Sbjct: 131 KTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPK 190
Query: 195 RHLLTTGWSTFVTSKRLVAGDAFVFLRGENGDLRVGVRRLARXXXXXXXXXXXXXXXHLG 254
RHLLTTGWS FV++KRLVAGD+ +F+ + L +G+RR R HLG
Sbjct: 191 RHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLG 250
Query: 255 VLATASHAVLTCTMFVVYYKPRT--SQFIIGVNKYLEALTN-KFSVGMRFKMRFEVEDSP 311
+LA A+HA T + F ++Y PR S+F+I + KY++A+ + + SVGMRF+M FE E+S
Sbjct: 251 LLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESS 310
Query: 312 ERRFSGTIVDVGDVSPG-WSNSQWRSLKVQWDEPASIPRPERVSSWEIEPFVASTTSNVT 370
RR+ GTI + D+ P W+NS WRS+KV WDE + R RVS WEIEP
Sbjct: 311 VRRYMGTITGICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSP 370
Query: 371 EPLVKSKRTRPPEVSS 386
PL + KR PP + S
Sbjct: 371 FPL-RLKRPWPPGLPS 385
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 88/199 (44%), Gaps = 10/199 (5%)
Query: 470 VSSRPNDGSAHDQVESGKKTENSMDCWVFGVNLTTT---FPNVDKELGCQVIIPSGPNDP 526
VS P G +E + +FGVN+ ++ PN L + I G +
Sbjct: 693 VSLPPFPGGRECSIEQEGSASDPHSHLLFGVNIDSSSLLMPNGMSNLRS-IGIEGGDSTT 751
Query: 527 LPIAACETETEGGHNPNYSVSNKEQKQIISDASLNERQNKQVSIPSLRTRTKVQMQGIAV 586
LP + + N + + I L +N P T KV G +
Sbjct: 752 LPFTSSNFNNDFSGNLAMTTPSS---CIDESGFLQSSENLGSENPQSNTFVKVYKSG-SF 807
Query: 587 GRAVDLTMLKDYDDLIDELEKLFDIKGELR--VQNKWNIAFTDYANDMMLVGDHPWQEFC 644
GR++D++ Y +L EL ++F ++G+L V++ W + F D ND++L+GD PW EF
Sbjct: 808 GRSLDISKFSSYHELRSELARMFGLEGQLEDPVRSGWQLVFVDRENDVLLLGDDPWPEFV 867
Query: 645 TIVKRISIYAREDVKMKCK 663
+ V I I + ++V+ K
Sbjct: 868 SSVWCIKILSPQEVQQMGK 886
>AT5G60450.1 | Symbols: ARF4 | auxin response factor 4 |
chr5:24308558-24312187 REVERSE LENGTH=788
Length = 788
Score = 317 bits (811), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 167/352 (47%), Positives = 220/352 (62%), Gaps = 20/352 (5%)
Query: 26 TELWKLCAGPLVDVPRSGERVFYFPQGHMEQLQASTNQEGNLDLNQQFPHFNLPSKILCR 85
+ELW CAGPL +P+ G V YFPQGH+EQ A + L++ P F+L +I+CR
Sbjct: 64 SELWHACAGPLTCLPKKGNVVVYFPQGHLEQ-DAMVSYSSPLEI----PKFDLNPQIVCR 118
Query: 86 VVHIQLLAEQESDEVYARITLIPESNQSEPTCPDSTQPE-----------TQKHKFHSFS 134
VV++QLLA +++DEVY ++TL+P S E + K H F
Sbjct: 119 VVNVQLLANKDTDEVYTQVTLLPLQEFSMLNGEGKEVKELGGEEERNGSSSVKRTPHMFC 178
Query: 135 KILTASDTSTHGGFSVLRRHATECLPQLDMTQAIPTQELAAKDLHGFEWKFKHIFRGQPR 194
K LTASDTSTHGGFSV RR A +C LD Q P+QEL AKDLHG EWKF+HI+RGQPR
Sbjct: 179 KTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPR 238
Query: 195 RHLLTTGWSTFVTSKRLVAGDAFVFLRGENGDLRVGVRRLARXXXXXXXXXXXXXXXHLG 254
RHLLTTGWS FV+ K LV+GDA +FLR E G+LR+G+RR AR
Sbjct: 239 RHLLTTGWSIFVSQKNLVSGDAVLFLRDEGGELRLGIRRAARPRNGLPDSIIEKNSCS-N 297
Query: 255 VLATASHAVLTCTMFVVYYKPRT--SQFIIGVNKYLEALTNKFSVGMRFKMRFEVEDSPE 312
+L+ ++AV T +MF V+Y PR ++F+I KY+ ++ + +G RF+MRFE++DSPE
Sbjct: 298 ILSLVANAVSTKSMFHVFYSPRATHAEFVIPYEKYITSIRSPVCIGTRFRMRFEMDDSPE 357
Query: 313 RRFSGTIVDVGDVSP-GWSNSQWRSLKVQWDEPASIPRPERVSSWEIEPFVA 363
RR +G + V D+ P W NS+WR L V+WDE ERVS WEI+P V+
Sbjct: 358 RRCAGVVTGVCDLDPYRWPNSKWRCLLVRWDESFVSDHQERVSPWEIDPSVS 409
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Query: 572 SLRTRTKVQMQGIAVGRAVDLTMLKDYDDLIDELEKLFDIKGELRVQNK-WNIAFTDYAN 630
S R TKV QG VGRA+DL+ L YDDL+ ELE+LF+++G LR K W I +TD N
Sbjct: 663 SKRICTKVHKQGSQVGRAIDLSRLNGYDDLLMELERLFNMEGLLRDPEKGWRILYTDSEN 722
Query: 631 DMMLVGDHPWQEFCTIVKRISIYAREDVK 659
DMM+VGD PW +FC +V +I +Y +E+V+
Sbjct: 723 DMMVVGDDPWHDFCNVVWKIHLYTKEEVE 751
>AT5G37020.1 | Symbols: ARF8, ATARF8 | auxin response factor 8 |
chr5:14630151-14634106 FORWARD LENGTH=811
Length = 811
Score = 316 bits (810), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 179/387 (46%), Positives = 242/387 (62%), Gaps = 22/387 (5%)
Query: 16 TGLGDDDQ-----LDTELWKLCAGPLVDVPRSGERVFYFPQGHMEQLQASTNQEGNLDLN 70
+GLG L++ELW CAGPLV +P SG RV YFPQGH EQ+ A+TN+E ++
Sbjct: 6 SGLGQQGHEGEKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKE----VD 61
Query: 71 QQFPHF-NLPSKILCRVVHIQLLAEQESDEVYARITLIPES--NQSEPTCP-DSTQPETQ 126
P++ +LP +++C++ ++ + A+ E+DEVYA++TL P + Q E P + P Q
Sbjct: 62 GHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPSKQ 121
Query: 127 KHKFHSFSKILTASDTSTHGGFSVLRRHATECLPQLDMTQAIPTQELAAKDLHGFEWKFK 186
+ F K LTASDTSTHGGFSV RR A + P LD T P QEL A+DLH EWKF+
Sbjct: 122 PSNY--FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFR 179
Query: 187 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGDLRVGVRRLARXXXXXXXXXX 246
HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+R E L +G+R R
Sbjct: 180 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVL 239
Query: 247 XXXXXHLGVLATASHAVLTCTMFVVYYKPRTSQ--FIIGVNKYLEALTN-KFSVGMRFKM 303
H+G+LA A+HA T + F V++ PR SQ F+I ++KY++A+ + + SVGMRF+M
Sbjct: 240 SSDSMHIGLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRM 299
Query: 304 RFEVEDSPERRFSGTIVDVGDV-SPGWSNSQWRSLKVQWDEPASIPRPERVSSWEIEPFV 362
FE E+S RR+ GTI + D+ S W NS WRS+KV WDE + R RVS WEIEP
Sbjct: 300 LFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL- 358
Query: 363 ASTTSNVTEPLVKSKRTRPPEVSSSEI 389
TT + L + RP +S +
Sbjct: 359 --TTFPMYPSLFPLRLKRPWHAGTSSL 383
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 585 AVGRAVDLTMLKDYDDLIDELEKLFDIKGELR--VQNKWNIAFTDYANDMMLVGDHPWQE 642
+VGR++D++ Y +L +EL K+F I+G L +++ W + F D ND++L+GD PW+
Sbjct: 715 SVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVDKENDILLLGDDPWES 774
Query: 643 FCTIVKRISIYAREDVKMKCKH 664
F V I I + EDV H
Sbjct: 775 FVNNVWYIKILSPEDVHQMGDH 796
>AT5G37020.2 | Symbols: ARF8 | auxin response factor 8 |
chr5:14630151-14633916 FORWARD LENGTH=773
Length = 773
Score = 316 bits (810), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 179/387 (46%), Positives = 242/387 (62%), Gaps = 22/387 (5%)
Query: 16 TGLGDDDQ-----LDTELWKLCAGPLVDVPRSGERVFYFPQGHMEQLQASTNQEGNLDLN 70
+GLG L++ELW CAGPLV +P SG RV YFPQGH EQ+ A+TN+E ++
Sbjct: 6 SGLGQQGHEGEKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKE----VD 61
Query: 71 QQFPHF-NLPSKILCRVVHIQLLAEQESDEVYARITLIPES--NQSEPTCP-DSTQPETQ 126
P++ +LP +++C++ ++ + A+ E+DEVYA++TL P + Q E P + P Q
Sbjct: 62 GHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPSKQ 121
Query: 127 KHKFHSFSKILTASDTSTHGGFSVLRRHATECLPQLDMTQAIPTQELAAKDLHGFEWKFK 186
+ F K LTASDTSTHGGFSV RR A + P LD T P QEL A+DLH EWKF+
Sbjct: 122 PSNY--FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFR 179
Query: 187 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGDLRVGVRRLARXXXXXXXXXX 246
HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+R E L +G+R R
Sbjct: 180 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVL 239
Query: 247 XXXXXHLGVLATASHAVLTCTMFVVYYKPRTSQ--FIIGVNKYLEALTN-KFSVGMRFKM 303
H+G+LA A+HA T + F V++ PR SQ F+I ++KY++A+ + + SVGMRF+M
Sbjct: 240 SSDSMHIGLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRM 299
Query: 304 RFEVEDSPERRFSGTIVDVGDV-SPGWSNSQWRSLKVQWDEPASIPRPERVSSWEIEPFV 362
FE E+S RR+ GTI + D+ S W NS WRS+KV WDE + R RVS WEIEP
Sbjct: 300 LFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL- 358
Query: 363 ASTTSNVTEPLVKSKRTRPPEVSSSEI 389
TT + L + RP +S +
Sbjct: 359 --TTFPMYPSLFPLRLKRPWHAGTSSL 383
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 585 AVGRAVDLTMLKDYDDLIDELEKLFDIKGELR--VQNKWNIAFTDYANDMMLVGDHPWQ 641
+VGR++D++ Y +L +EL K+F I+G L +++ W + F D ND++L+GD PW+
Sbjct: 715 SVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVDKENDILLLGDDPWE 773
>AT1G19850.1 | Symbols: MP, ARF5, IAA24 | Transcriptional factor B3
family protein / auxin-responsive factor AUX/IAA-related
| chr1:6887353-6891182 FORWARD LENGTH=902
Length = 902
Score = 311 bits (798), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 164/342 (47%), Positives = 220/342 (64%), Gaps = 10/342 (2%)
Query: 24 LDTELWKLCAGPLVDVPRSGERVFYFPQGHMEQLQASTNQEGNLDLNQQFPHF-NLPSKI 82
+++ELW CAGPLV +P+ G V+YF QGH EQ+ ST + Q P++ NLPS++
Sbjct: 51 INSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSAT----TQVPNYPNLPSQL 106
Query: 83 LCRVVHIQLLAEQESDEVYARITLIP-ESNQSEPTCPDSTQPETQKHKFHSFSKILTASD 141
+C+V ++ L A+++SDE+YA+++L P S + PD KH F K LTASD
Sbjct: 107 MCQVHNVTLHADKDSDEIYAQMSLQPVHSERDVFPVPDFGMLRGSKHPTEFFCKTLTASD 166
Query: 142 TSTHGGFSVLRRHATECLPQLDMTQAIPTQELAAKDLHGFEWKFKHIFRGQPRRHLLTTG 201
TSTHGGFSV RR A + P LD + PTQEL +DLH W F+HI+RGQP+RHLLTTG
Sbjct: 167 TSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTG 226
Query: 202 WSTFVTSKRLVAGDAFVFLRGENGDLRVGVRRLARXXXXXXXXXXXXXXXHLGVLATASH 261
WS FV SKRL AGD+ +F+R E L VGVRR R H+GVLA A+H
Sbjct: 227 WSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAH 286
Query: 262 AVLTCTMFVVYYKPRT--SQFIIGVNKYLEALT-NKFSVGMRFKMRFEVEDSPERRFSGT 318
A T F+++Y PR ++F+I + KY +A+ ++ SVGMRF M FE EDS +RR+ GT
Sbjct: 287 ATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRRYMGT 346
Query: 319 IVDVGDVSP-GWSNSQWRSLKVQWDEPASIPRPERVSSWEIE 359
IV + D+ P W S+WR+L+V+WDEP +P RVS W+IE
Sbjct: 347 IVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 388
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 69/111 (62%), Gaps = 11/111 (9%)
Query: 557 DASLNERQN------KQVSIPSLRTRTKVQMQGIAVGRAVDLTMLKDYDDLIDELEKLFD 610
D SL RQN ++++ P +RT TKVQ G +VGR++D+T KDY++L +E +F
Sbjct: 772 DCSL--RQNSKGSSWQKIATPRVRTYTKVQKTG-SVGRSIDVTSFKDYEELKSAIECMFG 828
Query: 611 IKGELR--VQNKWNIAFTDYANDMMLVGDHPWQEFCTIVKRISIYAREDVK 659
++G L + W + + DY +D++LVGD PW+EF V+ I I + +V+
Sbjct: 829 LEGLLTHPQSSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPTEVQ 879
>AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | auxin response factor
19 | chr1:6628395-6632779 REVERSE LENGTH=1086
Length = 1086
Score = 307 bits (787), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 164/381 (43%), Positives = 226/381 (59%), Gaps = 9/381 (2%)
Query: 19 GDDDQLDTELWKLCAGPLVDVPRSGERVFYFPQGHMEQLQASTNQEGNLDLNQQFPHFNL 78
G+ ++++LW CAGPLV +P G V YFPQGH EQ+ AS ++ D +P NL
Sbjct: 15 GEKKPINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQ--TDFIPNYP--NL 70
Query: 79 PSKILCRVVHIQLLAEQESDEVYARITLIPESN-QSEPTCPDSTQPETQKHKFHSFSKIL 137
PSK++C + + L A+ E+DEVYA++TL P + E + + F K L
Sbjct: 71 PSKLICLLHSVTLHADTETDEVYAQMTLQPVNKYDREALLASDMGLKLNRQPTEFFCKTL 130
Query: 138 TASDTSTHGGFSVLRRHATECLPQLDMTQAIPTQELAAKDLHGFEWKFKHIFRGQPRRHL 197
TASDTSTHGGFSV RR A + P LD + P QE+ AKDLH W F+HI+RGQP+RHL
Sbjct: 131 TASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHL 190
Query: 198 LTTGWSTFVTSKRLVAGDAFVFLRGENGDLRVGVRRLARXXXXXXXXXXXXXXXHLGVLA 257
LTTGWS FV++KRL AGD+ +F+R E L +G+RR R H+G+LA
Sbjct: 191 LTTGWSVFVSTKRLFAGDSVLFVRDEKSQLMLGIRRANRQTPTLSSSVISSDSMHIGILA 250
Query: 258 TASHAVLTCTMFVVYYKPRT--SQFIIGVNKYLEALTNKFSVGMRFKMRFEVEDSPERRF 315
A+HA + F +++ PR S+F++ + KY +AL + S+GMRF+M FE ED RR+
Sbjct: 251 AAAHANANSSPFTIFFNPRASPSEFVVPLAKYNKALYAQVSLGMRFRMMFETEDCGVRRY 310
Query: 316 SGTIVDVGDVSP-GWSNSQWRSLKVQWDEPASIPRPERVSSWEIEPFVASTTSNVTEPLV 374
GT+ + D+ P W SQWR+L+V WDE + RP RVS WEIEP V + P
Sbjct: 311 MGTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEP-VITPFYICPPPFF 369
Query: 375 KSKRTRPPEVSSSEIALNSPF 395
+ K R P + E+ + + F
Sbjct: 370 RPKYPRQPGMPDDELDMENAF 390
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 61/89 (68%), Gaps = 3/89 (3%)
Query: 573 LRTRTKVQMQGIAVGRAVDLTMLKDYDDLIDELEKLFDIKGELR--VQNKWNIAFTDYAN 630
+RT TKVQ +G +VGR++D+T YD+L +L ++F I+G+L + + W + +TD+ N
Sbjct: 957 MRTYTKVQKRG-SVGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHEN 1015
Query: 631 DMMLVGDHPWQEFCTIVKRISIYAREDVK 659
D++LVGD PW+EF V+ I I + +V+
Sbjct: 1016 DILLVGDDPWEEFVNCVQNIKILSSVEVQ 1044
>AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP |
Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1164
Length = 1164
Score = 303 bits (776), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 159/365 (43%), Positives = 224/365 (61%), Gaps = 12/365 (3%)
Query: 4 LKGAHLRGTTEETGLGDDDQLDTELWKLCAGPLVDVPRSGERVFYFPQGHMEQLQASTNQ 63
+K G + G+ +++ELW CAGPL+ +P +G V YFPQGH EQ+ AS +
Sbjct: 1 MKAPSSNGVSPNPVEGERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQK 60
Query: 64 EGNLDLNQQFPHFNLPSKILCRVVHIQLLAEQESDEVYARITLIPESNQSEPTCPDS--- 120
+ D +P NLPSK++C + ++ L A+ E+DEVYA++TL P + S
Sbjct: 61 Q--TDFIPSYP--NLPSKLICMLHNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDMG 116
Query: 121 TQPETQKHKFHSFSKILTASDTSTHGGFSVLRRHATECLPQLDMTQAIPTQELAAKDLHG 180
+ Q ++F F K LTASDTSTHGGFSV RR A + P LD + P QEL AKD+H
Sbjct: 117 LKLNRQPNEF--FCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHD 174
Query: 181 FEWKFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGDLRVGVRRLARXXXX 240
W F+HI+RGQP+RHLLTTGWS FV++KRL AGD+ +F+R L +G+RR R
Sbjct: 175 NTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPA 234
Query: 241 XXXXXXXXXXXHLGVLATASHAVLTCTMFVVYYKPRT--SQFIIGVNKYLEALTNKFSVG 298
H+GVLA A+HA + F ++Y PR ++F++ + KY +A+ + S+G
Sbjct: 235 LSSSVISSDSMHIGVLAAAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLG 294
Query: 299 MRFKMRFEVEDSPERRFSGTIVDVGDVSP-GWSNSQWRSLKVQWDEPASIPRPERVSSWE 357
MRF+M FE E+ RR+ GT+ + D+ P W NSQWR+L++ WDE A+ RP RVS W+
Sbjct: 295 MRFRMIFETEECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWD 354
Query: 358 IEPFV 362
IEP +
Sbjct: 355 IEPVL 359
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 573 LRTRTKVQMQGIAVGRAVDLTMLKDYDDLIDELEKLFDIKGELR--VQNKWNIAFTDYAN 630
+RT TKVQ +G +VGR++D+ + YD+L +L ++F I+G+L + W + + D+ N
Sbjct: 1036 MRTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEN 1094
Query: 631 DMMLVGDHPWQEFCTIVKRISIYAREDVK 659
D++LVGD PW+EF V+ I I + +V+
Sbjct: 1095 DILLVGDDPWEEFVNCVQSIKILSSAEVQ 1123
>AT2G33860.1 | Symbols: ETT, ARF3 | Transcriptional factor B3 family
protein / auxin-responsive factor AUX/IAA-related |
chr2:14325444-14328613 REVERSE LENGTH=608
Length = 608
Score = 303 bits (775), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 156/347 (44%), Positives = 210/347 (60%), Gaps = 24/347 (6%)
Query: 27 ELWKLCAGPLVDVPRSGERVFYFPQGHMEQLQASTNQEGNLDLNQQFPHFNLPSKILCRV 86
ELW CAGPL+ +P+ G V YFPQGH+EQ D + + LP + CR+
Sbjct: 54 ELWHACAGPLISLPKRGSLVLYFPQGHLEQAP---------DFSAAI--YGLPPHVFCRI 102
Query: 87 VHIQLLAEQESDEVYARITLIPESNQSEPTCP------DSTQPETQKHKF----HSFSKI 136
+ ++L AE +DEVYA+++L+PES E D + + + K H F K
Sbjct: 103 LDVKLHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPHMFCKT 162
Query: 137 LTASDTSTHGGFSVLRRHATECLPQLDMTQAIPTQELAAKDLHGFEWKFKHIFRGQPRRH 196
LTASDTSTHGGFSV RR A +C P LD +Q P+QEL A+DLHG EW+F+HI+RGQPRRH
Sbjct: 163 LTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRRH 222
Query: 197 LLTTGWSTFVTSKRLVAGDAFVFLRGENGDLRVGVRRLARXXXXXXXXXXXXXXXHLGVL 256
LLTTGWS FV K+LV+GDA +FLRG++G LR+GVRR ++ +
Sbjct: 223 LLTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQYNQNMNHNNF 282
Query: 257 ATASHAVLTCTMFVVYYKPRT--SQFIIGVNKYLEALTNKFSVGMRFKMRFEVEDSPERR 314
+ +HA+ T ++F + Y P+ S FII K+L+ + F +GMRFK R E ED+ ERR
Sbjct: 283 SEVAHAISTHSVFSISYNPKASWSNFIIPAPKFLKVVDYPFCIGMRFKARVESEDASERR 342
Query: 315 FSGTIVDVGDVSP-GWSNSQWRSLKVQWDEPASIPRPERVSSWEIEP 360
G I + D+ P W S+WR L V+WD+ + +RVS WEIEP
Sbjct: 343 SPGIISGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEP 389
>AT1G34170.2 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12444265-12446764 REVERSE LENGTH=479
Length = 479
Score = 303 bits (775), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 182/486 (37%), Positives = 256/486 (52%), Gaps = 83/486 (17%)
Query: 27 ELWKLCAGPLVDVPRSGERVFYFPQGHMEQLQASTNQEGNLDLNQQFPHFNLPSKILCRV 86
+LW +CAGPL +P+ GE+V+YFPQGH+E ++ ST E L+ P F+LPSK+ CRV
Sbjct: 25 KLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDE----LDHIRPIFDLPSKLRCRV 80
Query: 87 VHIQLLAEQESDEVYARITLIPESNQSEPTCPDSTQPETQKHKFHSFSKILTASDTSTHG 146
V I ++ +DEVYA+I+L+P++ + +T +T++ + FSKILTASD S G
Sbjct: 81 VAIDRKVDKNTDEVYAQISLMPDTTE---VMTHNTTMDTRRPIVYFFSKILTASDVSLSG 137
Query: 147 GFSVLRRHATECLPQLDMTQAIPTQELAAKDLHGFEWKFKHIFRGQPRRHLLTT--GWST 204
G + +++A EC P LDM+Q I TQ L AKDL+G EW FKH+FRG P+RH+ T+ GWS
Sbjct: 138 GLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSV 197
Query: 205 FVTSKRLVAGDAFVFLRGENGDLRVGVRRLARXXXXXXXXXXXXXXXHLGVLATASHAVL 264
F T+KRL+ GD FV LRGENG+LR G+RR GV+A+ +A
Sbjct: 198 FATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFK 257
Query: 265 TCTMFVVYYKPRTSQFIIGVNKYLEALTNKFSVGMRFKMRFEVEDSPERRFSGTIVDVGD 324
T MF V YKPR M+FE +D E+R+ GTI+ V D
Sbjct: 258 TKCMFNVVYKPR--------------------------MQFEGKDFSEKRYDGTIIGVND 291
Query: 325 VSPGWSNSQWRSLKVQWDEPASIPRPERVSSWEIEPFVASTTSNVTEPLVKSKRTRPPEV 384
+SP W +S+WRSLKVQWDE + RP +VS W+IE + S S++++ +K K+
Sbjct: 292 MSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPS--SDISQSSLKKKK------ 343
Query: 385 SSSEIALNSPFSTFWYHGPSLSHEPTQLGGAAEPENNENRVVRSLKGQREINGNPHLNLS 444
W + + L E GQR +N
Sbjct: 344 -------------HWLQLNEIGATLSNLWTCQE------------IGQRSMN-------- 370
Query: 445 SNFINPE---PKNNKDVAALSSACGYYPVSSRPNDGSAHDQVESGKK----TENSMDCWV 497
S PE P +D LS + + + PN+ DQ+ +K TE + C +
Sbjct: 371 SPISVPEFSYPNAIEDSKFLSGLLLNHSLLAIPNENYNSDQMIQPRKEDITTEATTSCLL 430
Query: 498 FGVNLT 503
FGV+LT
Sbjct: 431 FGVDLT 436
>AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23,
IAA25 | Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1150
Length = 1150
Score = 302 bits (773), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 159/366 (43%), Positives = 224/366 (61%), Gaps = 13/366 (3%)
Query: 4 LKGAHLRGTTEETGLGDDDQLDTELWKLCAGPLVDVPRSGERVFYFPQGHMEQLQASTNQ 63
+K G + G+ +++ELW CAGPL+ +P +G V YFPQGH EQ+ AS +
Sbjct: 1 MKAPSSNGVSPNPVEGERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQK 60
Query: 64 EGNLDLNQQFPHFNLPSKILCRVVHIQLLAEQESDEVYARITLIPESNQSEPTCPDS--- 120
+ D +P NLPSK++C + ++ L A+ E+DEVYA++TL P + S
Sbjct: 61 Q--TDFIPSYP--NLPSKLICMLHNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDMG 116
Query: 121 TQPETQKHKFHSFSKILTASDTSTHGGFSVLRRHATECLPQLDMTQAIPTQELAAKDLHG 180
+ Q ++F F K LTASDTSTHGGFSV RR A + P LD + P QEL AKD+H
Sbjct: 117 LKLNRQPNEF--FCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHD 174
Query: 181 FEWKFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGDLRVGVRRLARXXXX 240
W F+HI+RGQP+RHLLTTGWS FV++KRL AGD+ +F+R L +G+RR R
Sbjct: 175 NTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPA 234
Query: 241 XXXXXXXXXXXHLGVLATASHAVLTCTMFVVYYKPR---TSQFIIGVNKYLEALTNKFSV 297
H+GVLA A+HA + F ++Y PR ++F++ + KY +A+ + S+
Sbjct: 235 LSSSVISSDSMHIGVLAAAAHANANNSPFTIFYNPRWAAPAEFVVPLAKYTKAMYAQVSL 294
Query: 298 GMRFKMRFEVEDSPERRFSGTIVDVGDVSP-GWSNSQWRSLKVQWDEPASIPRPERVSSW 356
GMRF+M FE E+ RR+ GT+ + D+ P W NSQWR+L++ WDE A+ RP RVS W
Sbjct: 295 GMRFRMIFETEECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVW 354
Query: 357 EIEPFV 362
+IEP +
Sbjct: 355 DIEPVL 360
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 573 LRTRTKVQMQGIAVGRAVDLTMLKDYDDLIDELEKLFDIKGELR--VQNKWNIAFTDYAN 630
+RT TKVQ +G +VGR++D+ + YD+L +L ++F I+G+L + W + + D+ N
Sbjct: 1037 MRTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEN 1095
Query: 631 DMMLVGDHPWQEFCTIVKRISIYAREDVK 659
D++LVGD PW+EF V+ I I + +V+
Sbjct: 1096 DILLVGDDPWEEFVNCVQSIKILSSAEVQ 1124
>AT1G34170.3 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12443578-12446764 REVERSE LENGTH=546
Length = 546
Score = 302 bits (773), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 182/486 (37%), Positives = 256/486 (52%), Gaps = 83/486 (17%)
Query: 27 ELWKLCAGPLVDVPRSGERVFYFPQGHMEQLQASTNQEGNLDLNQQFPHFNLPSKILCRV 86
+LW +CAGPL +P+ GE+V+YFPQGH+E ++ ST E L+ P F+LPSK+ CRV
Sbjct: 25 KLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDE----LDHIRPIFDLPSKLRCRV 80
Query: 87 VHIQLLAEQESDEVYARITLIPESNQSEPTCPDSTQPETQKHKFHSFSKILTASDTSTHG 146
V I ++ +DEVYA+I+L+P++ + +T +T++ + FSKILTASD S G
Sbjct: 81 VAIDRKVDKNTDEVYAQISLMPDTTE---VMTHNTTMDTRRPIVYFFSKILTASDVSLSG 137
Query: 147 GFSVLRRHATECLPQLDMTQAIPTQELAAKDLHGFEWKFKHIFRGQPRRHLLTT--GWST 204
G + +++A EC P LDM+Q I TQ L AKDL+G EW FKH+FRG P+RH+ T+ GWS
Sbjct: 138 GLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSV 197
Query: 205 FVTSKRLVAGDAFVFLRGENGDLRVGVRRLARXXXXXXXXXXXXXXXHLGVLATASHAVL 264
F T+KRL+ GD FV LRGENG+LR G+RR GV+A+ +A
Sbjct: 198 FATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFK 257
Query: 265 TCTMFVVYYKPRTSQFIIGVNKYLEALTNKFSVGMRFKMRFEVEDSPERRFSGTIVDVGD 324
T MF V YKPR M+FE +D E+R+ GTI+ V D
Sbjct: 258 TKCMFNVVYKPR--------------------------MQFEGKDFSEKRYDGTIIGVND 291
Query: 325 VSPGWSNSQWRSLKVQWDEPASIPRPERVSSWEIEPFVASTTSNVTEPLVKSKRTRPPEV 384
+SP W +S+WRSLKVQWDE + RP +VS W+IE + S S++++ +K K+
Sbjct: 292 MSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPS--SDISQSSLKKKK------ 343
Query: 385 SSSEIALNSPFSTFWYHGPSLSHEPTQLGGAAEPENNENRVVRSLKGQREINGNPHLNLS 444
W + + L E GQR +N
Sbjct: 344 -------------HWLQLNEIGATLSNLWTCQE------------IGQRSMN-------- 370
Query: 445 SNFINPE---PKNNKDVAALSSACGYYPVSSRPNDGSAHDQVESGKK----TENSMDCWV 497
S PE P +D LS + + + PN+ DQ+ +K TE + C +
Sbjct: 371 SPISVPEFSYPNAIEDSKFLSGLLLNHSLLAIPNENYNSDQMIQPRKEDITTEATTSCLL 430
Query: 498 FGVNLT 503
FGV+LT
Sbjct: 431 FGVDLT 436
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 65/89 (73%), Gaps = 1/89 (1%)
Query: 577 TKVQMQGIAVGRAVDLTMLKDYDDLIDELEKLFDIKGELRVQNKWNIAFTDYANDMMLVG 636
TKV MQG+A+ RAVDLT + Y+ LI +LE+LFD+K ELR +N+W I FT+ MLVG
Sbjct: 436 TKVHMQGVAISRAVDLTAMHGYNQLIQKLEELFDLKDELRTRNQWEIVFTNNEGAEMLVG 495
Query: 637 DHPWQEFCTIVKRISIYAREDV-KMKCKH 664
D PW EFC + KRI I ++E++ KMK K+
Sbjct: 496 DDPWPEFCNMAKRIFICSKEEIKKMKLKN 524
>AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP |
Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1165
Length = 1165
Score = 302 bits (773), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 159/366 (43%), Positives = 224/366 (61%), Gaps = 13/366 (3%)
Query: 4 LKGAHLRGTTEETGLGDDDQLDTELWKLCAGPLVDVPRSGERVFYFPQGHMEQLQASTNQ 63
+K G + G+ +++ELW CAGPL+ +P +G V YFPQGH EQ+ AS +
Sbjct: 1 MKAPSSNGVSPNPVEGERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQK 60
Query: 64 EGNLDLNQQFPHFNLPSKILCRVVHIQLLAEQESDEVYARITLIPESNQSEPTCPDS--- 120
+ D +P NLPSK++C + ++ L A+ E+DEVYA++TL P + S
Sbjct: 61 Q--TDFIPSYP--NLPSKLICMLHNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDMG 116
Query: 121 TQPETQKHKFHSFSKILTASDTSTHGGFSVLRRHATECLPQLDMTQAIPTQELAAKDLHG 180
+ Q ++F F K LTASDTSTHGGFSV RR A + P LD + P QEL AKD+H
Sbjct: 117 LKLNRQPNEF--FCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHD 174
Query: 181 FEWKFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGDLRVGVRRLARXXXX 240
W F+HI+RGQP+RHLLTTGWS FV++KRL AGD+ +F+R L +G+RR R
Sbjct: 175 NTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPA 234
Query: 241 XXXXXXXXXXXHLGVLATASHAVLTCTMFVVYYKPR---TSQFIIGVNKYLEALTNKFSV 297
H+GVLA A+HA + F ++Y PR ++F++ + KY +A+ + S+
Sbjct: 235 LSSSVISSDSMHIGVLAAAAHANANNSPFTIFYNPRWAAPAEFVVPLAKYTKAMYAQVSL 294
Query: 298 GMRFKMRFEVEDSPERRFSGTIVDVGDVSP-GWSNSQWRSLKVQWDEPASIPRPERVSSW 356
GMRF+M FE E+ RR+ GT+ + D+ P W NSQWR+L++ WDE A+ RP RVS W
Sbjct: 295 GMRFRMIFETEECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVW 354
Query: 357 EIEPFV 362
+IEP +
Sbjct: 355 DIEPVL 360
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 573 LRTRTKVQMQGIAVGRAVDLTMLKDYDDLIDELEKLFDIKGELR--VQNKWNIAFTDYAN 630
+RT TKVQ +G +VGR++D+ + YD+L +L ++F I+G+L + W + + D+ N
Sbjct: 1037 MRTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEN 1095
Query: 631 DMMLVGDHPWQEFCTIVKRISIYAREDVK 659
D++LVGD PW+EF V+ I I + +V+
Sbjct: 1096 DILLVGDDPWEEFVNCVQSIKILSSAEVQ 1124
>AT2G28350.1 | Symbols: ARF10 | auxin response factor 10 |
chr2:12114331-12116665 FORWARD LENGTH=693
Length = 693
Score = 239 bits (611), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 166/469 (35%), Positives = 213/469 (45%), Gaps = 77/469 (16%)
Query: 21 DDQLDTELWKLCAGPLVDVPRSGERVFYFPQGHMEQLQASTNQEGNLDLNQQFPHFNLPS 80
+ LD +LW CAG +V +P VFYF QGH E A + F +P
Sbjct: 4 EKSLDPQLWHACAGSMVQIPSLNSTVFYFAQGHTEHAHAPPD----------FHAPRVPP 53
Query: 81 KILCRVVHIQLLAEQESDEVYARITLIPESNQSEP---------TCPDSTQPETQKHKFH 131
ILCRVV ++ LA+ E+DEV+A+ITL+P T P S K K
Sbjct: 54 LILCRVVSVKFLADAETDEVFAKITLLPLPGNDLDLENDAVLGLTPPSSDGNGNGKEKPA 113
Query: 132 SFSKILTASDTSTHGGFSVLRRHATECLPQLDMTQAIPTQELAAKDLHGFEWKFKHIFRG 191
SF+K LT SD + GGFSV R A P+LD + P Q + AKD+HG WKF+HI+RG
Sbjct: 114 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDIHGETWKFRHIYRG 173
Query: 192 QPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGDLRVGVRRLARXXXXXXXXXXXXXXX 251
PRRHLLTTGWSTFV K+L+AGD+ VFLR E+GDL VG+RR R
Sbjct: 174 TPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGLGSNAGSDNPYPG 233
Query: 252 HLGVLATASHAVLTCTM------------------------------------FVVYYKP 275
G L T + F V Y P
Sbjct: 234 FSGFLRDDESTTTTSKLMMMKRNGNNDGNAAATGRVRVEAVAEAVARAACGQAFEVVYYP 293
Query: 276 RTS--QFIIGVNKYLEALTNKFSVGMRFKMRFEVEDSPERR-FSGTIVDVGDVSP-GWSN 331
R S +F + A+ ++ GMRFKM FE EDS F GT+ V P W N
Sbjct: 294 RASTPEFCVKAADVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPN 353
Query: 332 SQWRSLKVQWDEPASIPRPERVSSWEIEPFVASTTSNVTEPLVKSKRTRPPEVSSSEIAL 391
S WR L+V WDEP + +RVS W +E V++ + P K+ R P+
Sbjct: 354 SPWRLLQVAWDEPDLLQNVKRVSPWLVE-LVSNMPTIHLSPFSPRKKIRIPQ-------- 404
Query: 392 NSPFSTFWYHG---PSLSHEPTQLGGAAEP---ENNENRVVRSLKGQRE 434
PF F +HG P S GG N+ N ++G R+
Sbjct: 405 --PFE-FPFHGTKFPIFSPGFANNGGGESMCYLSNDNNNAPAGIQGARQ 450
>AT4G30080.1 | Symbols: ARF16 | auxin response factor 16 |
chr4:14703369-14705564 REVERSE LENGTH=670
Length = 670
Score = 238 bits (607), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 149/387 (38%), Positives = 189/387 (48%), Gaps = 60/387 (15%)
Query: 19 GDDDQLDTELWKLCAGPLVDVPRSGERVFYFPQGHMEQLQASTNQEGNLDLNQQFPHFNL 78
G + LD +LW CAG +V +P +VFYFPQGH E + F + +
Sbjct: 11 GTEKGLDPQLWHACAGGMVRMPPMNSKVFYFPQGHAENAYDCVD----------FGNLPI 60
Query: 79 PSKILCRVVHIQLLAEQESDEVYARITLIP---------ESNQSEPTCPDSTQPETQKHK 129
P +LCRV+ I+ +A+ ESDEV+A++ LIP E E DS E+ K
Sbjct: 61 PPMVLCRVLAIKYMADAESDEVFAKLRLIPLKDDEYVDHEYGDGE----DSNGFESNSEK 116
Query: 130 FHSFSKILTASDTSTHGGFSVLRRHATECLPQLDMTQAIPTQELAAKDLHGFEWKFKHIF 189
SF+K LT SD + GGFSV R A P+LD P Q + AKD+HG WKF+HI+
Sbjct: 117 TPSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIY 176
Query: 190 RGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGDLRVGVRR---------------- 233
RG PRRHLLTTGWS FV K+LVAGD+ VF+R ENGDL VG+RR
Sbjct: 177 RGTPRRHLLTTGWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSAGW 236
Query: 234 -----------LARXXXXXXXXXXXXXXXHLGVLATASHAVLTCTM------FVVYYKPR 276
L R TA + T+ F V Y PR
Sbjct: 237 NPIGGSCGYSSLLREDESNSLRRSNCSLADRKGKVTAESVIEAATLAISGRPFEVVYYPR 296
Query: 277 --TSQFIIGVNKYLEALTNKFSVGMRFKMRFEVEDSPERR-FSGTIVDVGDVSP-GWSNS 332
TS+F + A+ + GMRFKM FE EDS F GT+ V P W NS
Sbjct: 297 ASTSEFCVKALDARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNVSDPIRWPNS 356
Query: 333 QWRSLKVQWDEPASIPRPERVSSWEIE 359
WR L+V WDEP + +RV+ W +E
Sbjct: 357 PWRLLQVAWDEPDLLQNVKRVNPWLVE 383
>AT1G43950.1 | Symbols: ARF23 | auxin response factor 23 |
chr1:16672582-16673952 REVERSE LENGTH=222
Length = 222
Score = 224 bits (571), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 114/218 (52%), Positives = 147/218 (67%), Gaps = 18/218 (8%)
Query: 19 GDDDQLDTELWKLCAGPLVDVPRSGERVFYFPQGHMEQLQASTNQEGNLDLNQQFPHFNL 78
G + +LWKLCAGPL D+P+ GE+V+YFPQGH+E ++AST +E LN+ P+ +L
Sbjct: 19 GSKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREE----LNELQPNCDL 74
Query: 79 PSKILCRVVHIQLLAEQESDEVYARITLIPESNQSEPTCPDSTQPETQKHKF----HSFS 134
PSK+ CRV+ I L E SDE Y ITL+P++ Q P +++F +SF+
Sbjct: 75 PSKLQCRVIAIHLKVENNSDETYVEITLMPDTTQV-------VIPTENENQFRPIVNSFT 127
Query: 135 KILTASDTSTHGGFSVLRRHATECLPQLDMTQAIPTQELAAKDLHGFEWKFKHIFRGQPR 194
K+LTASDTS G FSV +HA ECLP LDM+Q IP QEL A DLHG +W+FKH +R PR
Sbjct: 128 KVLTASDTSAQGEFSVPCKHAIECLPPLDMSQPIPAQELIAIDLHGNQWRFKHSYR-VPR 186
Query: 195 RHLLTTGWSTFVTSKRLVAGDAFVFLRGENGDLRVGVR 232
TTGW+ F TSK+LV GD VF RGE G+LRVG+R
Sbjct: 187 GD--TTGWNAFTTSKKLVVGDVIVFARGETGELRVGIR 222
>AT1G77850.1 | Symbols: ARF17 | auxin response factor 17 |
chr1:29272405-29275193 FORWARD LENGTH=585
Length = 585
Score = 189 bits (481), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 139/487 (28%), Positives = 216/487 (44%), Gaps = 75/487 (15%)
Query: 23 QLDTELWKLCAGPLVDVPRSGERVFYFPQGHMEQLQASTNQEGNLDLNQQFPHFNLPSKI 82
++D +W+ CAG V +P RV+YFPQGH+E L P P +
Sbjct: 15 EVDPTIWRACAGASVQIPVLHSRVYYFPQGHVEHC---------CPLLSTLPSSTSP--V 63
Query: 83 LCRVVHIQLLAEQESDEVYARITLIPESNQS-EPTCPDS----TQPETQKHKFHSFSKIL 137
C + IQLLA+ +DEV+A + L P + Q PT +K +F+KIL
Sbjct: 64 PCIITSIQLLADPVTDEVFAHLILQPMTQQQFTPTNYSRFGRFDGDVDDNNKVTTFAKIL 123
Query: 138 TASDTSTHGGFSVLRRHATECLPQLDMTQAIPTQELAAKDLHGFEWKFKHIFRGQPRRHL 197
T SD + GGFSV R A P L+ P Q+L D+HG W F+HI+RG PRRHL
Sbjct: 124 TPSDANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGTPRRHL 183
Query: 198 LTTGWSTFVTSKRLVAGDAFVFLRGENGDLRVGVRR------------------------ 233
LTTGWS FV SK+L+AGD+ VF+R ++ +GVRR
Sbjct: 184 LTTGWSKFVNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYGGDEYNGYYSQ 243
Query: 234 --LARXXXXXXXXXXXXXXXHLGVLATASHAVLTCTM---FVVYYKPRT--SQFIIGVNK 286
+A+ + A+ + F V + P S+F++
Sbjct: 244 SSVAKEDDGSPKKTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFYPAAGWSEFVVRAED 303
Query: 287 YLEALTNKFSVGMRFKMRFEVEDSPERR-FSGTIVDVGDVSPGWSNSQWRSLKVQWDEPA 345
+++ ++ G R KM E EDS F G + + W S W+ L++ WDEP
Sbjct: 304 VESSMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPWKQLQITWDEPE 363
Query: 346 SIPRPERVSSWEIEPFVASTTSNVTEPLVKSKRTRPPEVSSSEIALNSPFSTFWYHGPSL 405
+ +RV+ W++E +A+ + + P +KR + P+ ++ + +
Sbjct: 364 ILQNVKRVNPWQVE--IAAHATQLHTPFPPAKRLKYPQPGGGFLSGDD---------GEI 412
Query: 406 SHEPTQLGGAAEPENNENRVVRS-----LKGQRE-----------INGNPHLNLSSNFIN 449
+ + L AA P+ + + S ++G R+ I GNP ++NF++
Sbjct: 413 LYPQSGLSSAAAPDPSPSMFSYSTFPAGMQGARQYDFGSFNPTGFIGGNPPQLFTNNFLS 472
Query: 450 PEPKNNK 456
P P K
Sbjct: 473 PLPDLGK 479
>AT5G25890.1 | Symbols: IAA28, IAR2 | indole-3-acetic acid inducible
28 | chr5:9033480-9034554 FORWARD LENGTH=175
Length = 175
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Query: 577 TKVQMQGIAVGRAVDLTMLKDYDDLIDELEKLFDIKGELRVQNKWNIAFTDYANDMMLVG 636
K+ M+G+ +GR V+L+ +Y L +++LF K + ++ + + D D +LVG
Sbjct: 83 VKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQYTLVYEDTEGDKVLVG 142
Query: 637 DHPWQEFCTIVKRISIYAREDVKMKCKHSGSWS 669
D PW+ F + VKR+ + +K H+ S S
Sbjct: 143 DVPWEMFVSTVKRLHV-------LKTSHAFSLS 168
>AT4G01500.1 | Symbols: NGA4 | AP2/B3-like transcriptional factor
family protein | chr4:639791-640792 FORWARD LENGTH=333
Length = 333
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 131 HSFSKILTASDTSTHGGFSVLRRHATECLPQLDMTQAIPTQELAAKDLHGFEWKFKHIFR 190
H F K+LT SD + ++HA P D L +D +G W+F++ +
Sbjct: 34 HMFDKVLTPSDVGKLNRLVIPKQHAENFFPLEDNQNGT---VLDFQDKNGKMWRFRYSYW 90
Query: 191 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRG 222
+ +++T GWS FV K+L AGD F RG
Sbjct: 91 NSSQSYVMTKGWSRFVKEKKLFAGDTVSFYRG 122
>AT1G01030.1 | Symbols: NGA3 | AP2/B3-like transcriptional factor
family protein | chr1:11864-12940 REVERSE LENGTH=358
Length = 358
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 129 KFHSFSKILTASDTSTHGGFSVLRRHATECLPQLDMTQAIPTQELAAKDLHGFEWKFKHI 188
K H F K++T SD + ++HA P LD + L +D +G W+F++
Sbjct: 52 KEHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDSSNNQNGTLLNFQDRNGKMWRFRYS 110
Query: 189 FRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRG 222
+ + +++T GWS FV K+L AGD F RG
Sbjct: 111 YWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRG 144
>AT3G62100.1 | Symbols: IAA30 | indole-3-acetic acid inducible 30 |
chr3:22995835-22996593 FORWARD LENGTH=172
Length = 172
Score = 56.2 bits (134), Expect = 8e-08, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 564 QNKQVSIPSLRTRTKVQMQGIAVGRAVDLTMLKDYDDLIDELEKLFDI------KGELRV 617
QN+ S+ S KV M+G+ +GR +DL L Y DLI L+ +F+ + ++
Sbjct: 74 QNECNSVGSFYV--KVNMEGVPIGRKIDLLSLNGYHDLITTLDYMFNASILWAEEEDMCS 131
Query: 618 QNKWNIAFTDYANDMMLVGDHPWQEFCTIVKRISI 652
+ + + D D M+VGD PW+ F + V+R+ I
Sbjct: 132 EKSHVLTYADKEGDWMMVGDVPWEMFLSSVRRLKI 166
>AT3G16500.1 | Symbols: PAP1, IAA26 | phytochrome-associated protein
1 | chr3:5612801-5614208 REVERSE LENGTH=269
Length = 269
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 18/111 (16%)
Query: 566 KQVSIPSLRTRTKVQMQGIAVGRAVDLTMLKDYDDLIDELEKLF-----------DIKGE 614
KQV K+ M G+ +GR VDL Y+ L ++KLF D +GE
Sbjct: 143 KQVETKKEGMFVKINMDGVPIGRKVDLNAYNSYEQLSFVVDKLFRGLLAAQRDISDGQGE 202
Query: 615 -------LRVQNKWNIAFTDYANDMMLVGDHPWQEFCTIVKRISIYAREDV 658
L + ++ + + D D MLVGD PWQ F + VKR+ + ++
Sbjct: 203 EKPIIGLLDGKGEFTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKSSEI 253
>AT2G46990.1 | Symbols: IAA20 | indole-3-acetic acid inducible 20 |
chr2:19307861-19308869 FORWARD LENGTH=175
Length = 175
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 578 KVQMQGIAVGRAVDLTMLKDYDDLIDELEKLFDI------KGELRVQNKWNIAFTDYAND 631
KV M+G+ +GR +DL L Y DLI L+ +F+ + ++ + + + D D
Sbjct: 88 KVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMCNEKSHVLTYADKEGD 147
Query: 632 MMLVGDHPWQEFCTIVKRISI 652
M+VGD PW+ F + V+R+ I
Sbjct: 148 WMMVGDVPWEMFLSTVRRLKI 168
>AT1G51950.1 | Symbols: IAA18 | indole-3-acetic acid inducible 18 |
chr1:19305670-19307130 FORWARD LENGTH=267
Length = 267
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 18/99 (18%)
Query: 578 KVQMQGIAVGRAVDLTMLKDYDDLIDELEKLFD------------------IKGELRVQN 619
K+ M G+ +GR VDL+ Y+ L ++KLF I G L
Sbjct: 153 KINMYGVPIGRKVDLSAHNSYEQLSFTVDKLFRGLLAAQRDFPSSIEDEKPITGLLDGNG 212
Query: 620 KWNIAFTDYANDMMLVGDHPWQEFCTIVKRISIYAREDV 658
++ + + D D MLVGD PWQ F + VKR+ + ++
Sbjct: 213 EYTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKTSEI 251
>AT2G46870.1 | Symbols: NGA1 | AP2/B3-like transcriptional factor
family protein | chr2:19261313-19262245 FORWARD
LENGTH=310
Length = 310
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 131 HSFSKILTASDTSTHGGFSVLRRHATECLPQLDMTQAIPTQELAAKDLHGFEWKFKHIFR 190
H F K++T SD + ++HA P LD + L +DL G W+F++ +
Sbjct: 33 HMFDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSSNEKGLLLNFEDLTGKSWRFRYSYW 91
Query: 191 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLR--GENG 225
+ +++T GWS FV K+L AGD F R G++G
Sbjct: 92 NSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCVGDSG 128
>AT3G17600.1 | Symbols: IAA31 | indole-3-acetic acid inducible 31 |
chr3:6020281-6021040 REVERSE LENGTH=158
Length = 158
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 577 TKVQMQGIAVGRAVDLTMLKDYDDLIDELEKLFD---IKGELRVQNKWNIAFTDYANDMM 633
KV M+G+ +GR +DL + Y+ L++ L +FD I G R + + + D D M
Sbjct: 75 VKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGN-RDRKHHVLTYEDKDGDWM 133
Query: 634 LVGDHPWQEFCTIVKRISI 652
+VGD PW F V+R+ I
Sbjct: 134 MVGDIPWDMFLETVRRLKI 152
>AT1G13260.1 | Symbols: RAV1, EDF4 | related to ABI3/VP1 1 |
chr1:4542386-4543420 FORWARD LENGTH=344
Length = 344
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 133 FSKILTASDTSTHGGFSVLRRHATECLPQLDMTQAIPTQELAAKDLHGFEWKFKHIFRGQ 192
F K +T SD + + HA + P ++ L +D++G W+F++ +
Sbjct: 188 FEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVWRFRYSYWNS 247
Query: 193 PRRHLLTTGWSTFVTSKRLVAGDAFVFLR--GENGDLRVG 230
+ ++LT GWS FV K L AGD F R G++ L +G
Sbjct: 248 SQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIG 287
>AT2G33310.2 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=247
Length = 247
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 15/90 (16%)
Query: 578 KVQMQGIAVGRAVDLTMLKDYDDLIDELEKLF------------DIKGELRV---QNKWN 622
KV M G+A+GR VDL Y++L LE +F LR+ +++
Sbjct: 133 KVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEFV 192
Query: 623 IAFTDYANDMMLVGDHPWQEFCTIVKRISI 652
+ + D D MLVGD PW+ F VKR+ +
Sbjct: 193 LTYEDKEGDWMLVGDVPWRMFINSVKRLRV 222
>AT2G33310.3 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=246
Length = 246
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 15/90 (16%)
Query: 578 KVQMQGIAVGRAVDLTMLKDYDDLIDELEKLF------------DIKGELRV---QNKWN 622
KV M G+A+GR VDL Y++L LE +F LR+ +++
Sbjct: 132 KVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEFV 191
Query: 623 IAFTDYANDMMLVGDHPWQEFCTIVKRISI 652
+ + D D MLVGD PW+ F VKR+ +
Sbjct: 192 LTYEDKEGDWMLVGDVPWRMFINSVKRLRV 221
>AT2G33310.1 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=246
Length = 246
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 15/90 (16%)
Query: 578 KVQMQGIAVGRAVDLTMLKDYDDLIDELEKLF------------DIKGELRV---QNKWN 622
KV M G+A+GR VDL Y++L LE +F LR+ +++
Sbjct: 132 KVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEFV 191
Query: 623 IAFTDYANDMMLVGDHPWQEFCTIVKRISI 652
+ + D D MLVGD PW+ F VKR+ +
Sbjct: 192 LTYEDKEGDWMLVGDVPWRMFINSVKRLRV 221
>AT1G04550.2 | Symbols: IAA12, BDL | AUX/IAA transcriptional
regulator family protein | chr1:1240582-1241810 FORWARD
LENGTH=239
Length = 239
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 23/140 (16%)
Query: 538 GGHNPNYSVSNKEQKQIISDASLNERQ---NKQVSIPSLRTRTKVQ--------MQGIAV 586
G H N V+N+ K ++ E++ N ++ S++ KVQ M G+ +
Sbjct: 77 GLHRMNSLVNNQAMKAARAEEGDGEKKVVKNDELKDVSMKVNPKVQGLGFVKVNMDGVGI 136
Query: 587 GRAVDLTMLKDYDDLIDELEKL-FDIKGE--------LRV---QNKWNIAFTDYANDMML 634
GR VD+ Y++L LE++ F + G LR+ + + + + D D ML
Sbjct: 137 GRKVDMRAHSSYENLAQTLEEMFFGMTGTTCREKVKPLRLLDGSSDFVLTYEDKEGDWML 196
Query: 635 VGDHPWQEFCTIVKRISIYA 654
VGD PW+ F VKR+ I
Sbjct: 197 VGDVPWRMFINSVKRLRIMG 216
>AT3G23050.1 | Symbols: IAA7, AXR2 | indole-3-acetic acid 7 |
chr3:8194768-8196716 FORWARD LENGTH=243
Length = 243
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 577 TKVQMQGIAVGRAVDLTMLKDYDDLIDELEKLF--------------DIKGELRVQNKWN 622
KV M G R VDL M K Y DL D L K+F D E ++ N N
Sbjct: 127 VKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQGMIDFMNESKLMNLLN 186
Query: 623 I-----AFTDYANDMMLVGDHPWQEFCTIVKRISI 652
++ D D MLVGD PW+ F KR+ I
Sbjct: 187 SSEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLRI 221
>AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | AUX/IAA transcriptional
regulator family protein | chr5:17550465-17551206
FORWARD LENGTH=186
Length = 186
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/105 (33%), Positives = 48/105 (45%), Gaps = 6/105 (5%)
Query: 561 NERQNKQVSIPSLRTRTKVQMQGIAVGRAVDLTMLKDYDDLIDELEKLFDIK-GELRVQN 619
N Q K+ KV M G R +DLTM K Y +L+ LE +F GE +
Sbjct: 75 NNVQTKKSESEGQGNYVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFKFSVGEYFERE 134
Query: 620 KWNIA-----FTDYANDMMLVGDHPWQEFCTIVKRISIYAREDVK 659
+ + + D D MLVGD PW+ F + KR+ I +VK
Sbjct: 135 GYKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKGSEVK 179
>AT1G25560.1 | Symbols: TEM1, EDF1 | AP2/B3 transcription factor
family protein | chr1:8981891-8982976 REVERSE LENGTH=361
Length = 361
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 7/101 (6%)
Query: 133 FSKILTASDTSTHGGFSVLRRHATECLPQLDMTQAI-----PTQE--LAAKDLHGFEWKF 185
F K +T SD + ++HA + P MT A+ PT+ + +D G W+F
Sbjct: 195 FEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINLEDRTGKVWRF 254
Query: 186 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGD 226
++ + + ++LT GWS FV K L AGD F R D
Sbjct: 255 RYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCFERSTGPD 295
>AT3G61970.1 | Symbols: NGA2 | AP2/B3-like transcriptional factor
family protein | chr3:22951829-22952728 FORWARD
LENGTH=299
Length = 299
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 131 HSFSKILTASDTSTHGGFSVLRRHATECLPQLDMTQAIPTQE---LAAKDLHGFEWKFKH 187
H F K++T SD + ++HA P LD + + + L +D G W+F++
Sbjct: 21 HMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDNSTTNDSNKGLLLNFEDRSGNSWRFRY 79
Query: 188 IFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLR 221
+ + +++T GWS FV K+L AGD F R
Sbjct: 80 SYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQR 113
>AT1G68840.2 | Symbols: RAV2, AtRAV2 | related to ABI3/VP1 2 |
chr1:25880442-25881500 FORWARD LENGTH=352
Length = 352
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 133 FSKILTASDTSTHGGFSVLRRHATECLPQLDMTQAIPTQELAA-KDLHGFEWKFKHIFRG 191
F K +T SD + ++HA + P + A+ L +D++G W+F++ +
Sbjct: 188 FEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGVLINFEDVNGKVWRFRYSYWN 247
Query: 192 QPRRHLLTTGWSTFVTSKRLVAGDAFVFLR 221
+ ++LT GWS FV K L AGD F R
Sbjct: 248 SSQSYVLTKGWSRFVKEKNLRAGDVVTFER 277
>AT1G68840.1 | Symbols: RAV2, RAP2.8, TEM2, EDF2, AtRAV2 | related
to ABI3/VP1 2 | chr1:25880442-25881500 FORWARD
LENGTH=352
Length = 352
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 133 FSKILTASDTSTHGGFSVLRRHATECLPQLDMTQAIPTQELAA-KDLHGFEWKFKHIFRG 191
F K +T SD + ++HA + P + A+ L +D++G W+F++ +
Sbjct: 188 FEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGVLINFEDVNGKVWRFRYSYWN 247
Query: 192 QPRRHLLTTGWSTFVTSKRLVAGDAFVFLR 221
+ ++LT GWS FV K L AGD F R
Sbjct: 248 SSQSYVLTKGWSRFVKEKNLRAGDVVTFER 277
>AT3G25730.1 | Symbols: EDF3 | ethylene response DNA binding factor
3 | chr3:9396505-9397506 FORWARD LENGTH=333
Length = 333
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 133 FSKILTASDTSTHGGFSVLRRHATEC---LPQLDMTQAIPTQELAAKDLHGFEWKFKHIF 189
F K +T SD V+ +H E LP + ++ L +D++G W+F++ +
Sbjct: 183 FEKTVTPSDVGKLNRL-VIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRYSY 241
Query: 190 RGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGD 226
+ ++LT GWS FV KRL AGD F R + D
Sbjct: 242 WNSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQD 278
>AT2G36080.1 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr2:15148612-15151411 REVERSE LENGTH=244
Length = 244
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
Query: 133 FSKILTASDTSTHGGFSVLRRHATECLPQLDMTQAIPTQE---LAAKDLHGFEWKFKHIF 189
F K LT SD + ++HA P L A ++ L +D G W+F++ +
Sbjct: 38 FEKPLTPSDVGKLNRLVIPKQHAERYFP-LAAAAADAVEKGLLLCFEDEEGKPWRFRYSY 96
Query: 190 RGQPRRHLLTTGWSTFVTSKRLVAGDAFVF--LRGENGDLRVGVRR 233
+ ++LT GWS +V K L AGD +F R + G +G RR
Sbjct: 97 WNSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGGRFFIGWRR 142