Miyakogusa Predicted Gene
- Lj1g3v5034990.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v5034990.1 Non Chatacterized Hit- tr|I1NHW4|I1NHW4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.2903 PE=,75,8e-18,GroEL
apical domain-like,NULL; CHAPERONIN-60KDA, CH60,NULL;
CHAPERONIN,Chaperonin Cpn60/TCP-1; no
de,NODE_63419_length_412_cov_41.813107.path1.1
(99 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G33210.2 | Symbols: HSP60-2 | heat shock protein 60-2 | chr2:... 91 2e-19
AT2G33210.1 | Symbols: HSP60-2 | heat shock protein 60-2 | chr2:... 91 2e-19
AT3G23990.1 | Symbols: HSP60, HSP60-3B | heat shock protein 60 |... 91 2e-19
AT3G13860.1 | Symbols: HSP60-3A | heat shock protein 60-3A | chr... 74 2e-14
AT1G26230.2 | Symbols: | TCP-1/cpn60 chaperonin family protein ... 53 4e-08
AT1G26230.1 | Symbols: | TCP-1/cpn60 chaperonin family protein ... 53 4e-08
AT1G55490.2 | Symbols: CPN60B, LEN1 | chaperonin 60 beta | chr1:... 49 5e-07
AT1G55490.1 | Symbols: CPN60B, LEN1 | chaperonin 60 beta | chr1:... 49 5e-07
AT3G13470.1 | Symbols: | TCP-1/cpn60 chaperonin family protein ... 49 8e-07
AT5G56500.2 | Symbols: | TCP-1/cpn60 chaperonin family protein ... 48 1e-06
AT5G56500.1 | Symbols: | TCP-1/cpn60 chaperonin family protein ... 48 1e-06
>AT2G33210.2 | Symbols: HSP60-2 | heat shock protein 60-2 |
chr2:14075093-14078568 REVERSE LENGTH=580
Length = 580
Score = 90.9 bits (224), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 48/64 (75%), Gaps = 8/64 (12%)
Query: 2 DGKPFFNELEVVEGMKLDRGYISPYFITNQKNQKRELEDSLILIH--------VAVKVLE 53
DGK FNELEVVEGMK+DRGYISPYFITN K QK ELED LILIH VKVLE
Sbjct: 210 DGKTLFNELEVVEGMKIDRGYISPYFITNPKTQKCELEDPLILIHEKKISNINAMVKVLE 269
Query: 54 LALK 57
LALK
Sbjct: 270 LALK 273
>AT2G33210.1 | Symbols: HSP60-2 | heat shock protein 60-2 |
chr2:14075093-14078568 REVERSE LENGTH=585
Length = 585
Score = 90.9 bits (224), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 48/64 (75%), Gaps = 8/64 (12%)
Query: 2 DGKPFFNELEVVEGMKLDRGYISPYFITNQKNQKRELEDSLILIH--------VAVKVLE 53
DGK FNELEVVEGMK+DRGYISPYFITN K QK ELED LILIH VKVLE
Sbjct: 210 DGKTLFNELEVVEGMKIDRGYISPYFITNPKTQKCELEDPLILIHEKKISNINAMVKVLE 269
Query: 54 LALK 57
LALK
Sbjct: 270 LALK 273
>AT3G23990.1 | Symbols: HSP60, HSP60-3B | heat shock protein 60 |
chr3:8669013-8672278 FORWARD LENGTH=577
Length = 577
Score = 90.5 bits (223), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 48/64 (75%), Gaps = 8/64 (12%)
Query: 2 DGKPFFNELEVVEGMKLDRGYISPYFITNQKNQKRELEDSLILIH--------VAVKVLE 53
DGK FNELEVVEGMKLDRGY SPYFITNQK QK EL+D LILIH VKVLE
Sbjct: 209 DGKTLFNELEVVEGMKLDRGYTSPYFITNQKTQKCELDDPLILIHEKKISSINSIVKVLE 268
Query: 54 LALK 57
LALK
Sbjct: 269 LALK 272
>AT3G13860.1 | Symbols: HSP60-3A | heat shock protein 60-3A |
chr3:4561704-4565133 REVERSE LENGTH=572
Length = 572
Score = 73.6 bits (179), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/64 (60%), Positives = 45/64 (70%), Gaps = 8/64 (12%)
Query: 2 DGKPFFNELEVVEGMKLDRGYISPYFITNQKNQKRELEDSLILIH--------VAVKVLE 53
DG NELEVVEGMKL RGYISPYFIT++K QK ELE+ +ILIH +KVLE
Sbjct: 209 DGNTLDNELEVVEGMKLARGYISPYFITDEKTQKCELENPIILIHEKKISDINSLLKVLE 268
Query: 54 LALK 57
A+K
Sbjct: 269 AAVK 272
>AT1G26230.2 | Symbols: | TCP-1/cpn60 chaperonin family protein |
chr1:9072388-9075047 REVERSE LENGTH=559
Length = 559
Score = 53.1 bits (126), Expect = 4e-08, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 3 GKPFFNELEVVEGMKLDRGYISPYFITNQKNQKRELEDSLILI 45
GK N LE+VEGM+ +RGY+SPYF+T+++ ++ E D +L+
Sbjct: 166 GKYLVNNLEIVEGMQFNRGYLSPYFVTDRRKREAEFHDCKLLL 208
>AT1G26230.1 | Symbols: | TCP-1/cpn60 chaperonin family protein |
chr1:9072388-9075272 REVERSE LENGTH=611
Length = 611
Score = 53.1 bits (126), Expect = 4e-08, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 3 GKPFFNELEVVEGMKLDRGYISPYFITNQKNQKRELEDSLILI 45
GK N LE+VEGM+ +RGY+SPYF+T+++ ++ E D +L+
Sbjct: 218 GKYLVNNLEIVEGMQFNRGYLSPYFVTDRRKREAEFHDCKLLL 260
>AT1G55490.2 | Symbols: CPN60B, LEN1 | chaperonin 60 beta |
chr1:20715717-20718673 REVERSE LENGTH=600
Length = 600
Score = 49.3 bits (116), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 2 DGKPFFNELEVVEGMKLDRGYISPYFITNQKNQKRELEDSLILI 45
+GK N L VVEGM+ DRGYISPYF+T+ + E ++ +L+
Sbjct: 233 EGKSAENNLYVVEGMQFDRGYISPYFVTDSEKMSVEFDNCKLLL 276
>AT1G55490.1 | Symbols: CPN60B, LEN1 | chaperonin 60 beta |
chr1:20715717-20718673 REVERSE LENGTH=600
Length = 600
Score = 49.3 bits (116), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 2 DGKPFFNELEVVEGMKLDRGYISPYFITNQKNQKRELEDSLILI 45
+GK N L VVEGM+ DRGYISPYF+T+ + E ++ +L+
Sbjct: 233 EGKSAENNLYVVEGMQFDRGYISPYFVTDSEKMSVEFDNCKLLL 276
>AT3G13470.1 | Symbols: | TCP-1/cpn60 chaperonin family protein |
chr3:4389685-4392624 FORWARD LENGTH=596
Length = 596
Score = 48.5 bits (114), Expect = 8e-07, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 2 DGKPFFNELEVVEGMKLDRGYISPYFITNQKNQKRELEDSLILI 45
+GK N L VVEGM+ DRGYISPYF+T+ + E ++ +L+
Sbjct: 229 EGKSAENNLYVVEGMQFDRGYISPYFVTDSEKMSVEYDNCKLLL 272
>AT5G56500.2 | Symbols: | TCP-1/cpn60 chaperonin family protein |
chr5:22874058-22876966 FORWARD LENGTH=597
Length = 597
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 2 DGKPFFNELEVVEGMKLDRGYISPYFITNQKNQKRELEDSLILI 45
+GK N L VVEGM+ DRGYISPYF+T+ + E E+ + +
Sbjct: 229 EGKSAENSLYVVEGMQFDRGYISPYFVTDSEKMCAEYENCKLFL 272
>AT5G56500.1 | Symbols: | TCP-1/cpn60 chaperonin family protein |
chr5:22874058-22876966 FORWARD LENGTH=597
Length = 597
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 2 DGKPFFNELEVVEGMKLDRGYISPYFITNQKNQKRELEDSLILI 45
+GK N L VVEGM+ DRGYISPYF+T+ + E E+ + +
Sbjct: 229 EGKSAENSLYVVEGMQFDRGYISPYFVTDSEKMCAEYENCKLFL 272