Miyakogusa Predicted Gene

Lj1g3v5021150.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v5021150.1 Non Chatacterized Hit- tr|F6I675|F6I675_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,80.2,0,(Trans)glycosidases,Glycoside hydrolase, superfamily; no
description,Glycoside hydrolase, catalytic ,CUFF.33856.1
         (298 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G24090.1 | Symbols: ATCHIA, CHIA | chitinase A | chr5:8143805...   365   e-101

>AT5G24090.1 | Symbols: ATCHIA, CHIA | chitinase A |
           chr5:8143805-8145153 REVERSE LENGTH=302
          Length = 302

 Score =  365 bits (937), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 172/293 (58%), Positives = 215/293 (73%), Gaps = 2/293 (0%)

Query: 8   LIPIFSLVMLILARGSDA--GGISIYWGQNGNEGTLAETCATGNYEYVNLAFLYTFGNGR 65
           +I     +   L++ SDA  GGI+IYWGQNGNEG L+ TCATG Y YVN+AFL  FGNG+
Sbjct: 10  VIYFLFFISCSLSKPSDASRGGIAIYWGQNGNEGNLSATCATGRYAYVNVAFLVKFGNGQ 69

Query: 66  TPRLDLSGHCDAYSNGCTKLSTDIKSCQAKGIKVXXXXXXXXXXXXXXXXEDARQVATYL 125
           TP L+L+GHC+  +N CT   + +K CQ++GIKV                EDA+ +A YL
Sbjct: 70  TPELNLAGHCNPAANTCTHFGSQVKDCQSRGIKVMLSLGGGIGNYSIGSREDAKVIADYL 129

Query: 126 WNNFLGGQSSTRPLGDAVLDGIDFDIEQGTNQHWDDLARYLSAYSKKGKKVYLSAAPQCP 185
           WNNFLGG+SS+RPLGDAVLDGIDF+IE G+ QHWDDLAR LS +S +G+K+YL+ APQCP
Sbjct: 130 WNNFLGGKSSSRPLGDAVLDGIDFNIELGSPQHWDDLARTLSKFSHRGRKIYLTGAPQCP 189

Query: 186 FPDAWIGNALKTGLFDYVWVQFYNNPPCQYSPRNIANLENGWKQWISHIPASKIFLGLPA 245
           FPD  +G+AL T  FDYVW+QFYNNPPC YS  N  NL + W +W + I A K FLGLPA
Sbjct: 190 FPDRLMGSALNTKRFDYVWIQFYNNPPCSYSSGNTQNLFDSWNKWTTSIAAQKFFLGLPA 249

Query: 246 SPQAAGSGFISASDLTSKVLPAIKDSTKYGGVMLWSKYYDDQTGYSSSIKSKV 298
           +P+AAGSG+I    LTS++LP +K S KYGGVMLWSK++DD+ GYSSSI + V
Sbjct: 250 APEAAGSGYIPPDVLTSQILPTLKKSRKYGGVMLWSKFWDDKNGYSSSILASV 302