Miyakogusa Predicted Gene
- Lj1g3v5020920.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v5020920.1 Non Chatacterized Hit- tr|D7L6J6|D7L6J6_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,38.64,0.000000005,ARM repeat,Armadillo-type fold;
RING/U-box,NULL; ANKYRIN AND ARMADILLO REPEAT-CONTAINING PROTEIN
S,CUFF.33835.1
(457 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G07360.1 | Symbols: PUB9, ATPUB9 | plant U-box 9 | chr3:23548... 431 e-121
AT3G07360.3 | Symbols: PUB9, ATPUB9 | plant U-box 9 | chr3:23556... 325 3e-89
AT3G07360.2 | Symbols: PUB9, ATPUB9 | plant U-box 9 | chr3:23556... 325 3e-89
AT5G18320.1 | Symbols: | ARM repeat superfamily protein | chr5:... 284 1e-76
AT2G28830.1 | Symbols: PUB12, AtPUB12 | PLANT U-BOX 12 | chr2:12... 245 4e-65
AT3G46510.1 | Symbols: PUB13, ATPUB13 | plant U-box 13 | chr3:17... 245 5e-65
AT1G23030.1 | Symbols: | ARM repeat superfamily protein | chr1:... 244 7e-65
AT3G54850.1 | Symbols: ATPUB14, PUB14 | plant U-box 14 | chr3:20... 231 8e-61
AT1G71020.2 | Symbols: | ARM repeat superfamily protein | chr1:... 217 2e-56
AT1G71020.1 | Symbols: | ARM repeat superfamily protein | chr1:... 216 2e-56
AT5G18340.1 | Symbols: | ARM repeat superfamily protein | chr5:... 216 3e-56
AT5G18330.1 | Symbols: | ARM repeat superfamily protein | chr5:... 211 1e-54
AT5G42340.1 | Symbols: PUB15 | Plant U-Box 15 | chr5:16928086-16... 184 2e-46
AT1G29340.1 | Symbols: PUB17, ATPUB17 | plant U-box 17 | chr1:10... 155 4e-38
AT5G01830.1 | Symbols: | ARM repeat superfamily protein | chr5:... 148 7e-36
AT2G23140.2 | Symbols: | RING/U-box superfamily protein with AR... 148 8e-36
AT2G23140.1 | Symbols: | RING/U-box superfamily protein with AR... 148 9e-36
AT1G60190.1 | Symbols: | ARM repeat superfamily protein | chr1:... 133 3e-31
AT3G01400.1 | Symbols: | ARM repeat superfamily protein | chr3:... 130 2e-30
AT5G67340.1 | Symbols: | ARM repeat superfamily protein | chr5:... 120 2e-27
AT5G58680.1 | Symbols: | ARM repeat superfamily protein | chr5:... 119 6e-27
AT3G19380.1 | Symbols: PUB25 | plant U-box 25 | chr3:6714602-671... 110 2e-24
AT1G27910.1 | Symbols: PUB45, ATPUB45 | plant U-box 45 | chr1:97... 110 3e-24
AT4G21350.1 | Symbols: B80, PUB8 | plant U-box 8 | chr4:11356143... 108 7e-24
AT3G54790.1 | Symbols: | ARM repeat superfamily protein | chr3:... 108 9e-24
AT3G54790.2 | Symbols: | ARM repeat superfamily protein | chr3:... 107 1e-23
AT1G10560.1 | Symbols: PUB18, ATPUB18 | plant U-box 18 | chr1:34... 107 2e-23
AT4G16490.1 | Symbols: | ARM repeat superfamily protein | chr4:... 105 9e-23
AT1G49780.1 | Symbols: PUB26 | plant U-box 26 | chr1:18429024-18... 103 3e-22
AT1G24330.1 | Symbols: | ARM repeat superfamily protein | chr1:... 102 4e-22
AT1G67530.2 | Symbols: | ARM repeat superfamily protein | chr1:... 101 1e-21
AT1G67530.1 | Symbols: | ARM repeat superfamily protein | chr1:... 101 1e-21
AT5G65920.1 | Symbols: | ARM repeat superfamily protein | chr5:... 91 1e-18
AT5G62560.1 | Symbols: | RING/U-box superfamily protein with AR... 90 3e-18
AT5G40140.1 | Symbols: | RING/U-box superfamily protein with AR... 88 1e-17
AT5G37490.1 | Symbols: | ARM repeat superfamily protein | chr5:... 87 3e-17
AT1G66160.1 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY p... 86 8e-17
AT3G49810.1 | Symbols: | ARM repeat superfamily protein | chr3:... 85 9e-17
AT3G52450.1 | Symbols: PUB22 | plant U-box 22 | chr3:19440943-19... 80 3e-15
AT2G35930.1 | Symbols: PUB23 | plant U-box 23 | chr2:15083101-15... 80 4e-15
AT5G64660.1 | Symbols: ATCMPG2, CMPG2 | CYS, MET, PRO, and GLY p... 78 1e-14
AT5G09800.1 | Symbols: | ARM repeat superfamily protein | chr5:... 77 3e-14
AT3G18710.1 | Symbols: PUB29, ATPUB29 | plant U-box 29 | chr3:64... 74 3e-13
AT3G61390.2 | Symbols: | RING/U-box superfamily protein | chr3:... 73 3e-13
AT4G36550.1 | Symbols: | ARM repeat superfamily protein | chr4:... 73 3e-13
AT5G65200.1 | Symbols: PUB38, ATPUB38 | plant U-box 38 | chr5:26... 73 4e-13
AT1G01660.1 | Symbols: | RING/U-box superfamily protein | chr1:... 72 9e-13
AT3G47820.1 | Symbols: PUB39 | PLANT U-BOX 39 | chr3:17644434-17... 69 8e-12
AT4G31890.2 | Symbols: | ARM repeat superfamily protein | chr4:... 65 9e-11
AT4G31890.1 | Symbols: | ARM repeat superfamily protein | chr4:... 65 9e-11
AT4G25160.1 | Symbols: | U-box domain-containing protein kinase... 64 3e-10
AT5G51270.1 | Symbols: | U-box domain-containing protein kinase... 64 3e-10
AT2G45920.1 | Symbols: | U-box domain-containing protein | chr2... 63 3e-10
AT3G11840.1 | Symbols: PUB24 | plant U-box 24 | chr3:3736578-373... 63 4e-10
AT1G56040.1 | Symbols: | HEAT/U-box domain-containing protein |... 63 5e-10
AT2G25130.1 | Symbols: | ARM repeat superfamily protein | chr2:... 61 1e-09
AT1G01670.1 | Symbols: | RING/U-box superfamily protein | chr1:... 61 1e-09
AT5G65500.1 | Symbols: | U-box domain-containing protein kinase... 60 3e-09
AT2G45910.1 | Symbols: | U-box domain-containing protein kinase... 58 1e-08
AT1G01680.1 | Symbols: ATPUB54, PUB54 | plant U-box 54 | chr1:24... 58 2e-08
AT1G66160.2 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY p... 57 2e-08
AT5G61550.2 | Symbols: | U-box domain-containing protein kinase... 57 2e-08
AT3G03440.1 | Symbols: | ARM repeat superfamily protein | chr3:... 57 3e-08
AT5G57035.1 | Symbols: | U-box domain-containing protein kinase... 57 3e-08
AT1G76390.2 | Symbols: | ARM repeat superfamily protein | chr1:... 57 3e-08
AT1G76390.1 | Symbols: | ARM repeat superfamily protein | chr1:... 57 3e-08
AT3G49060.2 | Symbols: | U-box domain-containing protein kinase... 56 4e-08
AT3G49060.1 | Symbols: | U-box domain-containing protein kinase... 56 4e-08
AT2G19410.1 | Symbols: | U-box domain-containing protein kinase... 55 1e-07
AT5G61550.1 | Symbols: | U-box domain-containing protein kinase... 53 5e-07
>AT3G07360.1 | Symbols: PUB9, ATPUB9 | plant U-box 9 |
chr3:2354884-2356613 FORWARD LENGTH=460
Length = 460
Score = 431 bits (1107), Expect = e-121, Method: Compositional matrix adjust.
Identities = 229/435 (52%), Positives = 308/435 (70%), Gaps = 15/435 (3%)
Query: 33 IVESDDYTVQTADDAIATLSALKLLKKNKTRENRTASFSDKFDPPTEFRCPISTQLMTDP 92
I + DD VQT D LSAL+ K ++ + + P EFRCP+S +LM DP
Sbjct: 31 IDDEDDLGVQTIDQLQDALSALREATMRKMAKSSSLEMLETVSCPEEFRCPLSNELMRDP 90
Query: 93 VILSTGQTYDRPFIQRWLNEEGHRTCPQTQQVLSHSILIPNFLVREMITKWCKDRGIEM- 151
V+L++GQTYD+ FIQ+WL+ G+RTCP+TQQVL H+ L PN L+REMI+KWCK G+E
Sbjct: 91 VVLASGQTYDKLFIQKWLSS-GNRTCPKTQQVLPHTALTPNLLIREMISKWCKKNGLETK 149
Query: 152 ----PKPVRDVDEAVTKADRH-RXXXXXXXXXXXXXDQKEAAKELRLLTKRIATFRTLFG 206
P V + DE VT++DR DQK AAKELRLLT++ FR LFG
Sbjct: 150 SQYHPNLVNE-DETVTRSDREIFNSLLCKVSSSNLQDQKSAAKELRLLTRKGTEFRALFG 208
Query: 207 ES-GVIARLLSPLSPGRTCADPD--LHEDLITTVLNLSINDD-NKKVLGEDPAVISLLID 262
ES I RL++PL G ++PD L ED++TT+LN+SI+DD NKK++ E+P VI LLID
Sbjct: 209 ESPDEITRLVNPLLHG---SNPDEKLQEDVVTTLLNISIHDDSNKKLVCENPNVIPLLID 265
Query: 263 ALKSGTIQTRSNXXXXXXXXXXLDSNKHIIGKSGAIKHLIDLLDDGHPLAVKDAASAIFN 322
AL+ GT+ TRSN LDSNK +IGKSG +K LIDLL++G+PLA+KD A+AIF
Sbjct: 266 ALRRGTVATRSNAAAAIFTLSALDSNKVLIGKSGILKPLIDLLEEGNPLAIKDVAAAIFT 325
Query: 323 ICVMHENKGIAVQEGAVRVIMKKIKDNIIVDELLAILALLSTHPKAVEEMGDLGPVPFLL 382
+C+ HEN+ AV++GAVRV+ KKI + + VDELLAILA+L TH KAVEE+G+LG V +LL
Sbjct: 326 LCIAHENRSRAVRDGAVRVLGKKISNGLYVDELLAILAMLVTHWKAVEELGELGGVSWLL 385
Query: 383 GNIRETTSERSKENCVAMLYTICYNDRTKWKEIREDERVNGTLSKLAQCGTSRAKRKASG 442
RE+ +R+KEN + +L+TIC++DRTKWKEI+E+E +GT++KL++ GTSRA+RKA+G
Sbjct: 386 KITRESECKRNKENAIVILHTICFSDRTKWKEIKEEENAHGTITKLSREGTSRAQRKANG 445
Query: 443 ILERVNRFFSLTHTA 457
IL+R+ + +LTHTA
Sbjct: 446 ILDRLRKAMNLTHTA 460
>AT3G07360.3 | Symbols: PUB9, ATPUB9 | plant U-box 9 |
chr3:2355636-2356613 FORWARD LENGTH=325
Length = 325
Score = 325 bits (834), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 177/329 (53%), Positives = 238/329 (72%), Gaps = 14/329 (4%)
Query: 139 MITKWCKDRGIEM-----PKPVRDVDEAVTKADRH-RXXXXXXXXXXXXXDQKEAAKELR 192
MI+KWCK G+E P V + DE VT++DR DQK AAKELR
Sbjct: 1 MISKWCKKNGLETKSQYHPNLVNE-DETVTRSDREIFNSLLCKVSSSNLQDQKSAAKELR 59
Query: 193 LLTKRIATFRTLFGES-GVIARLLSPLSPGRTCADPD--LHEDLITTVLNLSINDD-NKK 248
LLT++ FR LFGES I RL++PL G ++PD L ED++TT+LN+SI+DD NKK
Sbjct: 60 LLTRKGTEFRALFGESPDEITRLVNPLLHG---SNPDEKLQEDVVTTLLNISIHDDSNKK 116
Query: 249 VLGEDPAVISLLIDALKSGTIQTRSNXXXXXXXXXXLDSNKHIIGKSGAIKHLIDLLDDG 308
++ E+P VI LLIDAL+ GT+ TRSN LDSNK +IGKSG +K LIDLL++G
Sbjct: 117 LVCENPNVIPLLIDALRRGTVATRSNAAAAIFTLSALDSNKVLIGKSGILKPLIDLLEEG 176
Query: 309 HPLAVKDAASAIFNICVMHENKGIAVQEGAVRVIMKKIKDNIIVDELLAILALLSTHPKA 368
+PLA+KD A+AIF +C+ HEN+ AV++GAVRV+ KKI + + VDELLAILA+L TH KA
Sbjct: 177 NPLAIKDVAAAIFTLCIAHENRSRAVRDGAVRVLGKKISNGLYVDELLAILAMLVTHWKA 236
Query: 369 VEEMGDLGPVPFLLGNIRETTSERSKENCVAMLYTICYNDRTKWKEIREDERVNGTLSKL 428
VEE+G+LG V +LL RE+ +R+KEN + +L+TIC++DRTKWKEI+E+E +GT++KL
Sbjct: 237 VEELGELGGVSWLLKITRESECKRNKENAIVILHTICFSDRTKWKEIKEEENAHGTITKL 296
Query: 429 AQCGTSRAKRKASGILERVNRFFSLTHTA 457
++ GTSRA+RKA+GIL+R+ + +LTHTA
Sbjct: 297 SREGTSRAQRKANGILDRLRKAMNLTHTA 325
>AT3G07360.2 | Symbols: PUB9, ATPUB9 | plant U-box 9 |
chr3:2355636-2356613 FORWARD LENGTH=325
Length = 325
Score = 325 bits (834), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 177/329 (53%), Positives = 238/329 (72%), Gaps = 14/329 (4%)
Query: 139 MITKWCKDRGIEM-----PKPVRDVDEAVTKADRH-RXXXXXXXXXXXXXDQKEAAKELR 192
MI+KWCK G+E P V + DE VT++DR DQK AAKELR
Sbjct: 1 MISKWCKKNGLETKSQYHPNLVNE-DETVTRSDREIFNSLLCKVSSSNLQDQKSAAKELR 59
Query: 193 LLTKRIATFRTLFGES-GVIARLLSPLSPGRTCADPD--LHEDLITTVLNLSINDD-NKK 248
LLT++ FR LFGES I RL++PL G ++PD L ED++TT+LN+SI+DD NKK
Sbjct: 60 LLTRKGTEFRALFGESPDEITRLVNPLLHG---SNPDEKLQEDVVTTLLNISIHDDSNKK 116
Query: 249 VLGEDPAVISLLIDALKSGTIQTRSNXXXXXXXXXXLDSNKHIIGKSGAIKHLIDLLDDG 308
++ E+P VI LLIDAL+ GT+ TRSN LDSNK +IGKSG +K LIDLL++G
Sbjct: 117 LVCENPNVIPLLIDALRRGTVATRSNAAAAIFTLSALDSNKVLIGKSGILKPLIDLLEEG 176
Query: 309 HPLAVKDAASAIFNICVMHENKGIAVQEGAVRVIMKKIKDNIIVDELLAILALLSTHPKA 368
+PLA+KD A+AIF +C+ HEN+ AV++GAVRV+ KKI + + VDELLAILA+L TH KA
Sbjct: 177 NPLAIKDVAAAIFTLCIAHENRSRAVRDGAVRVLGKKISNGLYVDELLAILAMLVTHWKA 236
Query: 369 VEEMGDLGPVPFLLGNIRETTSERSKENCVAMLYTICYNDRTKWKEIREDERVNGTLSKL 428
VEE+G+LG V +LL RE+ +R+KEN + +L+TIC++DRTKWKEI+E+E +GT++KL
Sbjct: 237 VEELGELGGVSWLLKITRESECKRNKENAIVILHTICFSDRTKWKEIKEEENAHGTITKL 296
Query: 429 AQCGTSRAKRKASGILERVNRFFSLTHTA 457
++ GTSRA+RKA+GIL+R+ + +LTHTA
Sbjct: 297 SREGTSRAQRKANGILDRLRKAMNLTHTA 325
>AT5G18320.1 | Symbols: | ARM repeat superfamily protein |
chr5:6064431-6066186 REVERSE LENGTH=458
Length = 458
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 169/419 (40%), Positives = 243/419 (57%), Gaps = 16/419 (3%)
Query: 41 VQTADDAIATLSALKLLKKNKTRENRTASFSDKFDPPTEFRCPISTQLMTDPVILSTGQT 100
V+ D+A+ L+ L+ K S + P EF C +S +M +PVI+++GQT
Sbjct: 42 VKAIDEAVRILTCLR-----KVESKIPESDISPVEVPKEFICTLSNTIMIEPVIIASGQT 96
Query: 101 YDRPFIQRWLNEEGHRTCPQTQQVLSHSILIPNFLVREMITKWCKDRGIEMPKPVRDVDE 160
Y++ +I WL E RTCP+T+QVLSH + IPN L+ ++IT+WC + KP ++
Sbjct: 97 YEKRYITEWLKHE--RTCPKTKQVLSHRLWIPNHLISDLITQWCLVNKYDHQKPSDELVA 154
Query: 161 AVTKADRHRXXXXXXXXXXXXXDQKEAAKELRLLTKRIATFRTLF--GESGVIARLLSPL 218
+ +D DQ EAAKELR TK+ R F G I RLLSPL
Sbjct: 155 ELFTSDIE-ALLQRVSSSSSVADQIEAAKELRHQTKKFPNVRVFFVAGIHDSITRLLSPL 213
Query: 219 SPGRTCADP--DLHEDLITTVLNLSINDDNKKVLGEDPAVISLLIDALKSGTIQTRSNXX 276
S D +L E+++T + NLSI + NK V+ E+ VI LL +LK GT +TR N
Sbjct: 214 STLDEAVDSSLELQENIVTALFNLSILESNKTVIAENCLVIPLLTKSLKQGTDETRRNAA 273
Query: 277 XXXXXXXXLDSNKHIIGKSGAIKHLIDLLDDGHPLAVKDAASAIFNICVMHENKGIAVQE 336
+DSNK IIG S A+K LIDL+++G LA K+A S +FN+C++ ENKG V
Sbjct: 274 ATLSSLSAIDSNKIIIGNSEAVKALIDLIEEGDLLATKEATSTVFNLCIVLENKGKVVSA 333
Query: 337 GAVRVIMKKIKDNIIVDELLAILALLSTHPKAVEEMGDLGPVPFLLGNIRETTSERSKEN 396
G + KKIK VDELL++LAL+STH +AVEEM LG + L +R+ +S + EN
Sbjct: 334 GLIHAATKKIKAGSNVDELLSLLALISTHNRAVEEMDKLGFIYDLFSILRKPSSLLTGEN 393
Query: 397 CVAMLYTICYN---DRTKWKEIREDERVNGTLSKLAQCGTSRAKRKASGILERVNRFFS 452
V +++ + Y+ DR++ K + E+E +GT +KLA+ G+ RA RKA GIL+ + RF +
Sbjct: 394 AVVIVFNM-YDRNRDRSRLKVVGEEENQHGTFTKLAKQGSVRAARKAQGILQWIKRFVT 451
>AT2G28830.1 | Symbols: PUB12, AtPUB12 | PLANT U-BOX 12 |
chr2:12367001-12370608 REVERSE LENGTH=962
Length = 962
Score = 245 bits (626), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 146/390 (37%), Positives = 218/390 (55%), Gaps = 17/390 (4%)
Query: 72 DKFDPPTEFRCPISTQLMTDPVILSTGQTYDRPFIQRWLNEEGHRTCPQTQQVLSHSILI 131
D PP EFRCPIS +LMTDPVI+S+GQTY+R I++WL E GH TCP+TQ+ L+ I+
Sbjct: 252 DMLIPPEEFRCPISLELMTDPVIVSSGQTYERECIKKWL-EGGHLTCPKTQETLTSDIMT 310
Query: 132 PNFLVREMITKWCKDRGIEMPK-------PVRDVDEAVTKADRHRXXXXXXXXXXXXX-- 182
PN+++R +I +WC+ GIE PK + + D H
Sbjct: 311 PNYVLRSLIAQWCESNGIEPPKRPNISQPSSKASSSSSAPDDEHNKIEELLLKLTSQQPE 370
Query: 183 DQKEAAKELRLLTKRIATFRTLFGESGVIARLLSPLSPGRTCADPDLHEDLITTVLNLSI 242
D++ AA E+RLL K+ R SG I L++ L+ D E +T++LNLSI
Sbjct: 371 DRRSAAGEIRLLAKQNNHNRVAIAASGAIPLLVNLLT---ISNDSRTQEHAVTSILNLSI 427
Query: 243 NDDNKKVLGEDPAVISLLIDALKSGTIQTRSNXXXXXXXXXXLDSNKHIIGKSGAIKHLI 302
+NK + + ++ L+ G+++ R N +D NK IG +GAI L+
Sbjct: 428 CQENKGKIVYSSGAVPGIVHVLQKGSMEARENAAATLFSLSVIDENKVTIGAAGAIPPLV 487
Query: 303 DLLDDGHPLAVKDAASAIFNICVMHENKGIAVQEGAVRVIMKKIK--DNIIVDELLAILA 360
LL +G KDAA+A+FN+C+ NKG AV+ G V V+M+ + ++ +VDE L+ILA
Sbjct: 488 TLLSEGSQRGKKDAATALFNLCIFQGNKGKAVRAGLVPVLMRLLTEPESGMVDESLSILA 547
Query: 361 LLSTHPKAVEEMGDLGPVPFLLGNIRETTSERSKENCVAMLYTICYNDRTKWKEIREDER 420
+LS+HP E+G VP L+ IR + S R+KEN A+L +C ++ E ++
Sbjct: 548 ILSSHPDGKSEVGAADAVPVLVDFIR-SGSPRNKENSAAVLVHLCSWNQQHLIEAQK-LG 605
Query: 421 VNGTLSKLAQCGTSRAKRKASGILERVNRF 450
+ L ++A+ GT R KRKA+ +L R +RF
Sbjct: 606 IMDLLIEMAENGTDRGKRKAAQLLNRFSRF 635
>AT3G46510.1 | Symbols: PUB13, ATPUB13 | plant U-box 13 |
chr3:17124106-17126539 REVERSE LENGTH=660
Length = 660
Score = 245 bits (625), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 148/382 (38%), Positives = 218/382 (57%), Gaps = 16/382 (4%)
Query: 77 PTEFRCPISTQLMTDPVILSTGQTYDRPFIQRWLNEEGHRTCPQTQQVLSHSILIPNFLV 136
P +FRCPIS ++M DPVI+S+GQTY+R I++W+ E GH TCP+TQQ L+ + L PN+++
Sbjct: 257 PDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWI-EGGHSTCPKTQQALTSTTLTPNYVL 315
Query: 137 REMITKWCKDRGIEMPKPV-----RDVDEAVTKADRHRXXXXX-XXXXXXXXDQKEAAKE 190
R +I +WC+ IE PKP R V + A+ ++ DQ+ AA E
Sbjct: 316 RSLIAQWCEANDIEPPKPPSSLRPRKVSSFSSPAEANKIEDLMWRLAYGNPEDQRSAAGE 375
Query: 191 LRLLTKRIATFRTLFGESGVIARLLSPLSPGRTCADPDLHEDLITTVLNLSINDDNKKVL 250
+RLL KR A R E+G I L+ LS D + E +T +LNLSI ++NK +
Sbjct: 376 IRLLAKRNADNRVAIAEAGAIPLLVGLLS----TPDSRIQEHSVTALLNLSICENNKGAI 431
Query: 251 GEDPAVISLLIDALKSGTIQTRSNXXXXXXXXXXLDSNKHIIGKSGAIKHLIDLLDDGHP 310
A I ++ LK G+++ R N +D NK IG GAI L+ LL++G
Sbjct: 432 VSAGA-IPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLVVLLNEGTQ 490
Query: 311 LAVKDAASAIFNICVMHENKGIAVQEGAVRVIMKKIKD--NIIVDELLAILALLSTHPKA 368
KDAA+A+FN+C+ NKG A++ G + + + + + + +VDE LAILA+LS+HP+
Sbjct: 491 RGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDEALAILAILSSHPEG 550
Query: 369 VEEMGDLGPVPFLLGNIRETTSERSKENCVAMLYTICYNDRTKWKEIREDERVNGTLSKL 428
+G VP L+ IR T S R++EN A+L +C D E ++ + G L L
Sbjct: 551 KAIIGSSDAVPSLVEFIR-TGSPRNRENAAAVLVHLCSGDPQHLVEAQK-LGLMGPLIDL 608
Query: 429 AQCGTSRAKRKASGILERVNRF 450
A GT R KRKA+ +LER++R
Sbjct: 609 AGNGTDRGKRKAAQLLERISRL 630
>AT1G23030.1 | Symbols: | ARM repeat superfamily protein |
chr1:8156745-8158842 FORWARD LENGTH=612
Length = 612
Score = 244 bits (624), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 152/402 (37%), Positives = 226/402 (56%), Gaps = 31/402 (7%)
Query: 55 KLLKKNKTRENRTASFSDKFDPPTEFRCPISTQLMTDPVILSTGQTYDRPFIQRWLNEEG 114
K++ KN + SDK P +F CP+S +LM DPVI++TGQTY+R +IQRW+ + G
Sbjct: 224 KMVNKNTDESKK----SDKLTIPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWI-DCG 278
Query: 115 HRTCPQTQQVLSHSILIPNFLVREMITKWCKDRGIEMP------KPVRDVDEAVTKADRH 168
+ TCP+TQQ L + L PN+++R +I++WC + IE P + D +V +A
Sbjct: 279 NLTCPKTQQKLENFTLTPNYVLRSLISRWCAEHNIEQPAGYINGRTKNSGDMSVIRALVQ 338
Query: 169 RXXXXXXXXXXXXXDQKEAAKELRLLTKRIATFRTLFGESGVIARLLSPLSPGRTCADPD 228
R D++ A E+R L+KR R L E+G I L++ L T D
Sbjct: 339 RLSSRSTE------DRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLL----TSEDVA 388
Query: 229 LHEDLITTVLNLSINDDNKKVLGEDPAVISLLIDALKSGTIQTRSNXXXXXXXXXXLDSN 288
E+ IT VLNLSI ++NK+++ AV S+ + L++GT++ R N D N
Sbjct: 389 TQENAITCVLNLSIYENNKELIMFAGAVTSI-VQVLRAGTMEARENAAATLFSLSLADEN 447
Query: 289 KHIIGKSGAIKHLIDLLDDGHPLAVKDAASAIFNICVMHENKGIAVQEGAVRVIMKKIKD 348
K IIG SGAI L+DLL++G P KDAA+A+FN+C+ H NKG AV+ G V ++K + D
Sbjct: 448 KIIIGGSGAIPALVDLLENGTPRGKKDAATALFNLCIYHGNKGRAVRAGIVTALVKMLSD 507
Query: 349 NI---IVDELLAILALLSTHPKAVEEMGDLGPVPFLLGNIRETTSERSKENCVAMLYTIC 405
+ +VDE L IL++L+ + A + +P L+G I +T R++EN A+L ++C
Sbjct: 508 STRHRMVDEALTILSVLANNQDAKSAIVKANTLPALIG-ILQTDQTRNRENAAAILLSLC 566
Query: 406 YNDRTKWKEIREDERVNGT--LSKLAQCGTSRAKRKASGILE 445
D K I R+ L L++ GT R KRKA +LE
Sbjct: 567 KRDTEKLITI---GRLGAVVPLMDLSKNGTERGKRKAISLLE 605
>AT3G54850.1 | Symbols: ATPUB14, PUB14 | plant U-box 14 |
chr3:20321524-20323848 FORWARD LENGTH=632
Length = 632
Score = 231 bits (589), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 147/382 (38%), Positives = 218/382 (57%), Gaps = 17/382 (4%)
Query: 77 PTEFRCPISTQLMTDPVILSTGQTYDRPFIQRWLNEEGHRTCPQTQQVLSHSILIPNFLV 136
P FRCPIS +LM DPVI+STGQTY+R IQ+WL+ GH+TCP++Q+ L H+ L PN+++
Sbjct: 249 PEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDA-GHKTCPKSQETLLHAGLTPNYVL 307
Query: 137 REMITKWCKDRGIEMP------KPVRDVDEAVTKADRHRXXXXXXXXXXXXXDQKEAAK- 189
+ +I WC+ GIE+P + + + + DR +Q+ AA
Sbjct: 308 KSLIALWCESNGIELPQNQGSCRTTKIGGSSSSDCDRTFVLSLLEKLANGTTEQQRAAAG 367
Query: 190 ELRLLTKRIATFRTLFGESGVIARLLSPLSPGRTCADPDLHEDLITTVLNLSINDDNKKV 249
ELRLL KR R E+G I L+ LS DP E +T +LNLSIN+ NK
Sbjct: 368 ELRLLAKRNVDNRVCIAEAGAIPLLVELLS----SPDPRTQEHSVTALLNLSINEGNKGA 423
Query: 250 LGEDPAVISLLIDALKSGTIQTRSNXXXXXXXXXXLDSNKHIIGKSGAIKHLIDLLDDGH 309
+ D I+ +++ LK+G+++ R N +D NK IG +GAI+ LI LL++G
Sbjct: 424 I-VDAGAITDIVEVLKNGSMEARENAAATLFSLSVIDENKVAIGAAGAIQALISLLEEGT 482
Query: 310 PLAVKDAASAIFNICVMHENKGIAVQEGAVRVIMKKIKD--NIIVDELLAILALLSTHPK 367
KDAA+AIFN+C+ NK AV+ G V + + +KD +VDE LAILA+LST+ +
Sbjct: 483 RRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGMVDEALAILAILSTNQE 542
Query: 368 AVEEMGDLGPVPFLLGNIRETTSERSKENCVAMLYTICYNDRTKWKEIREDERVNGTLSK 427
+ + +P L+ IR T S R++EN A+L+ +C + + RE + L +
Sbjct: 543 GKTAIAEAESIPVLVEIIR-TGSPRNRENAAAILWYLCIGNIERLNVARE-VGADVALKE 600
Query: 428 LAQCGTSRAKRKASGILERVNR 449
L + GT RAKRKA+ +LE + +
Sbjct: 601 LTENGTDRAKRKAASLLELIQQ 622
>AT1G71020.2 | Symbols: | ARM repeat superfamily protein |
chr1:26790825-26792357 REVERSE LENGTH=480
Length = 480
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 143/408 (35%), Positives = 221/408 (54%), Gaps = 34/408 (8%)
Query: 57 LKKNKTRENRTASFSDKFDPPTEFRCPISTQLMTDPVILSTGQTYDRPFIQRWLNEEGHR 116
L+K T + + SD P +F CPIS +LM DP I+STGQTY+R FIQRW+ + G+
Sbjct: 76 LEKAVTENSDDSQKSDNLTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWI-DCGNL 134
Query: 117 TCPQTQQVLSHSILIPNFLVREMITKWCKDRGIEMPK------------PVRDV--DEAV 162
+CP+TQQ L + L PN+++R +I++WC IE P RD+ D +
Sbjct: 135 SCPKTQQKLENFTLTPNYVLRSLISQWCTKHNIEQPGGYMNGRTKNSDGSFRDLSGDMSA 194
Query: 163 TKADRHRXXXXXXXXXXXXXDQKEAAKELRLLTKRIATFRTLFGESGVIARLLSPLSPGR 222
+A D++ A E+R L+KR R L E+G I L+ L+
Sbjct: 195 IRA------LVCKLSSQSIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSD- 247
Query: 223 TCADPDLHEDLITTVLNLSINDDNKKVLGEDPAVISLLIDALKSGTIQTRSNXXXXXXXX 282
D + E+ +T +LNLSI + NK+++ AV S+++ L++G+++ R N
Sbjct: 248 --GDTETQENAVTCILNLSIYEHNKELIMLAGAVTSIVL-VLRAGSMEARENAAATLFSL 304
Query: 283 XXLDSNKHIIGKSGAIKHLIDLLDDGHPLAVKDAASAIFNICVMHENKGIAVQEGAVRVI 342
D NK IIG SGAI L+DLL G KDAA+A+FN+C+ NKG AV+ G V+ +
Sbjct: 305 SLADENKIIIGASGAIMALVDLLQYGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPL 364
Query: 343 MKKIKDNI---IVDELLAILALLSTHPKAVEEMGDLGPVPFLLGNIRETTSERSKENCVA 399
+K + D+ + DE L IL++L+++ A + +P L+ +++ R++EN A
Sbjct: 365 VKMLTDSSSERMADEALTILSVLASNQVAKTAILRANAIPPLIDCLQK-DQPRNRENAAA 423
Query: 400 MLYTICYNDRTKWKEIREDERVNGT--LSKLAQCGTSRAKRKASGILE 445
+L +C D K I R+ L +L++ GT RAKRKA+ +LE
Sbjct: 424 ILLCLCKRDTEKLISI---GRLGAVVPLMELSRDGTERAKRKANSLLE 468
>AT1G71020.1 | Symbols: | ARM repeat superfamily protein |
chr1:26790825-26793105 REVERSE LENGTH=628
Length = 628
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 143/408 (35%), Positives = 221/408 (54%), Gaps = 34/408 (8%)
Query: 57 LKKNKTRENRTASFSDKFDPPTEFRCPISTQLMTDPVILSTGQTYDRPFIQRWLNEEGHR 116
L+K T + + SD P +F CPIS +LM DP I+STGQTY+R FIQRW+ + G+
Sbjct: 224 LEKAVTENSDDSQKSDNLTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWI-DCGNL 282
Query: 117 TCPQTQQVLSHSILIPNFLVREMITKWCKDRGIEMPK------------PVRDV--DEAV 162
+CP+TQQ L + L PN+++R +I++WC IE P RD+ D +
Sbjct: 283 SCPKTQQKLENFTLTPNYVLRSLISQWCTKHNIEQPGGYMNGRTKNSDGSFRDLSGDMSA 342
Query: 163 TKADRHRXXXXXXXXXXXXXDQKEAAKELRLLTKRIATFRTLFGESGVIARLLSPLSPGR 222
+A D++ A E+R L+KR R L E+G I L+ L+
Sbjct: 343 IRA------LVCKLSSQSIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSD- 395
Query: 223 TCADPDLHEDLITTVLNLSINDDNKKVLGEDPAVISLLIDALKSGTIQTRSNXXXXXXXX 282
D + E+ +T +LNLSI + NK+++ AV S+++ L++G+++ R N
Sbjct: 396 --GDTETQENAVTCILNLSIYEHNKELIMLAGAVTSIVL-VLRAGSMEARENAAATLFSL 452
Query: 283 XXLDSNKHIIGKSGAIKHLIDLLDDGHPLAVKDAASAIFNICVMHENKGIAVQEGAVRVI 342
D NK IIG SGAI L+DLL G KDAA+A+FN+C+ NKG AV+ G V+ +
Sbjct: 453 SLADENKIIIGASGAIMALVDLLQYGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPL 512
Query: 343 MKKIKDNI---IVDELLAILALLSTHPKAVEEMGDLGPVPFLLGNIRETTSERSKENCVA 399
+K + D+ + DE L IL++L+++ A + +P L+ +++ R++EN A
Sbjct: 513 VKMLTDSSSERMADEALTILSVLASNQVAKTAILRANAIPPLIDCLQK-DQPRNRENAAA 571
Query: 400 MLYTICYNDRTKWKEIREDERVNGT--LSKLAQCGTSRAKRKASGILE 445
+L +C D K I R+ L +L++ GT RAKRKA+ +LE
Sbjct: 572 ILLCLCKRDTEKLISI---GRLGAVVPLMELSRDGTERAKRKANSLLE 616
>AT5G18340.1 | Symbols: | ARM repeat superfamily protein |
chr5:6070640-6072198 REVERSE LENGTH=456
Length = 456
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 150/422 (35%), Positives = 227/422 (53%), Gaps = 20/422 (4%)
Query: 40 TVQTADDAIATLSALKLLK-KNKTRENRTASFSDKFDPPTEFRCPISTQLMTDPVILSTG 98
TV++ D+AI L+ LK+++ K + RE+ ++S + P EF+C +S +M DPVI+ +G
Sbjct: 41 TVKSIDEAIRILNRLKIVESKKRKRESDSSSV----EVPKEFKCTLSKTIMIDPVIIFSG 96
Query: 99 QTYDRPFIQRWLNEEGHRTCPQTQQVLSHSILIPNFLVREMITKWC----KDRGIEMPKP 154
QTY++ +I WLN + TCP +QVL L PN L+ E+IT+WC DR P
Sbjct: 97 QTYEKRYITEWLNHD--LTCPTAKQVLYRVCLTPNHLINELITRWCLANKYDRPAPKPSD 154
Query: 155 VRDVDEAVTKADRHRXXXXXXXXXXXXXDQKEAAKELRLLTKRIATFRTLFGES--GVIA 212
+ V E T DQ EAAKEL L T++ R F + I
Sbjct: 155 IDYVTELFTDG-IESLLQRISSPSSSVADQTEAAKELALQTEKFVNVRDFFIKELPDSIT 213
Query: 213 RLLSPLS--PGRTCADPDLHEDLITTVLNLSINDDNKKVLGEDPAVISLLIDALKSGTIQ 270
RLL+PLS ++P+L E+++T + N+S + NK VL E+ VI LL ++K G++
Sbjct: 214 RLLTPLSVLGDEVDSNPELQENIVTALFNMSTFEKNKTVLAENHQVIPLLAKSMKQGSVV 273
Query: 271 TRSNXXXXXXXXXXLDSNKHIIGKSGAIKHLIDLLDDGHPL-AVKDAASAIFNICV-MHE 328
TR N +DSNK IIG S A+K LIDL+ + L A DA A+ ++C E
Sbjct: 274 TRRNATLTLASLSDIDSNKIIIGNSVALKALIDLIGELDDLSATHDALCAVIDLCCDERE 333
Query: 329 NKGIAVQEGAVRVIMKKIKDNIIVDELLAILALLSTHPKAVEEMGDLGPVPFLLGNIRET 388
N A+ G +K IK + E LA LAL+S H + ++E+ +LG + LL +R+T
Sbjct: 334 NWKKAISLGLAPAAIKNIKARRNLFESLAALALISPHERVIQEVANLGVIYDLLSILRKT 393
Query: 389 TSERSKENCVAMLYTICYNDRTKW--KEIREDERVNGTLSKLAQCGTSRAKRKASGILER 446
+ + EN V ++ + R + K + E+E + T +K+A G+ A KA GIL+
Sbjct: 394 SCMVTCENAVVIVGNMYAKSRERSIKKILAEEENQHKTFTKIATQGSVVAVMKAQGILQC 453
Query: 447 VN 448
+N
Sbjct: 454 IN 455
>AT5G18330.1 | Symbols: | ARM repeat superfamily protein |
chr5:6068474-6070042 REVERSE LENGTH=445
Length = 445
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 140/417 (33%), Positives = 216/417 (51%), Gaps = 22/417 (5%)
Query: 45 DDAIATLSALKLLKKNKTRENRTASFSDKFDPPTEFRCPISTQLMTDPVILSTGQTYDRP 104
D+AI L+ L+ K S + P EF C +S ++M +P+++++GQT+++
Sbjct: 39 DEAIRILTCLR-----KIESKNPESDISPVEVPKEFICTLSNKIMIEPMLIASGQTFEKS 93
Query: 105 FIQRWLNEEGHRTCPQTQQVLSHSILIPNFLVREMITKWCKDRGIEMPKPVRDVDEAVTK 164
+I WL E RTCP+T+QVL H +IPN L+ E+I +WC + PK +V + T
Sbjct: 94 YILEWLKHE--RTCPRTKQVLYHRFMIPNHLINEVIKEWCLIHNFDRPKTSDEVIDLFT- 150
Query: 165 ADRHRXXXXXXXXXXXXXDQKEAAKELRLLTKRIATFRTLFGES--GVIARLLSPLSPGR 222
DQ EAAKEL L KR ++ F I RLL+PLS
Sbjct: 151 -GDLESLLQRISSPSSVEDQTEAAKELALKAKRFSSVCVYFVAKIPDSITRLLTPLSISE 209
Query: 223 TCADPDLHEDLITTVLNLSINDDNKKVLGEDPAVISLLIDALKSGTIQTRSNXXXXXXXX 282
++P+ E+++T + S ++ NK ++ E+P V+ LL +K GT+ TR +
Sbjct: 210 D-SNPEFLENIVTALHIFSTSEKNKTLVAENPLVLPLLAKYMKQGTVLTRIHSAATVNSL 268
Query: 283 XXLDSNKHIIGKSGAIKHLIDLLDDGHPLAVKDAASAIFNICVMHENKGIAVQEGAVRVI 342
DSNK IIG S +K LI ++++G LA +A SA+ N+C + E AV EG +R
Sbjct: 269 SYTDSNKIIIGNSEVLKALIHVIEEGDSLATSEAFSALSNLCPVKEISEKAVSEGLIRAA 328
Query: 343 MKKIKDNIIVDELLAILALLST-HPKAVEEMGDLGPVPFLLGNIRETTSERSKENCVAML 401
+KKIK V LL++LA +ST + + EEM +LG + L +R + S + EN V ++
Sbjct: 329 IKKIKAGSNVSMLLSLLAFVSTQNHQTTEEMDNLGLIYDLFSILRNSNSLVNDENAVVIV 388
Query: 402 YTICYNDRT---------KWKEIREDERVNGTLSKLAQCGTSRAKRKASGILERVNR 449
Y IC + + K + E+E +GT ++L RA A ILE + R
Sbjct: 389 YNICKSYKALQNVVLREEKRDVVLEEENKHGTFTRLENQEAGRATSLAKRILEWILR 445
>AT5G42340.1 | Symbols: PUB15 | Plant U-Box 15 |
chr5:16928086-16930367 REVERSE LENGTH=660
Length = 660
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 125/387 (32%), Positives = 212/387 (54%), Gaps = 11/387 (2%)
Query: 65 NRTASFSDKFDPPTEFRCPISTQLMTDPVILSTGQTYDRPFIQRWLNEEGHRTCPQTQQV 124
N+ + S P EF CPI+ ++M DPVI++TGQTY++ IQ+W + GH+TCP+T+Q
Sbjct: 279 NKAITKSTSLILPHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDA-GHKTCPKTRQE 337
Query: 125 LSHSILIPNFLVREMITKWCKDRGIEMPKPVRDVDEAVTKADRHRXXXXXXXXXXXXXDQ 184
L H L PNF ++ +I +WC+ ++P+ D + D +Q
Sbjct: 338 LDHLSLAPNFALKNLIMQWCEKNNFKIPEKEVSPDSQNEQKD-EVSLLVEALSSSQLEEQ 396
Query: 185 KEAAKELRLLTKRIATFRTLFGESGVIARLLSPLSPGRTCADPDLHEDLITTVLNLSIND 244
+ + K++RLL + R L +G I L+ LS D + E+ +TT+LNLSI++
Sbjct: 397 RRSVKQMRLLARENPENRVLIANAGAIPLLVQLLS----YPDSGIQENAVTTLLNLSIDE 452
Query: 245 DNKKVLGEDPAVISLLIDALKSGTIQTRSNXXXXXXXXXXLDSNKHIIGKSGAIKHLIDL 304
NKK++ + A+ ++ I+ L++G + R N LD NK IG S I L+DL
Sbjct: 453 VNKKLISNEGAIPNI-IEILENGNREARENSAAALFSLSMLDENKVTIGLSNGIPPLVDL 511
Query: 305 LDDGHPLAVKDAASAIFNICVMHENKGIAVQEGAVRVIMKKIKDNI--IVDELLAILALL 362
L G KDA +A+FN+ + NKG A+ G V+ ++ +KD ++DE L+IL LL
Sbjct: 512 LQHGTLRGKKDALTALFNLSLNSANKGRAIDAGIVQPLLNLLKDKNLGMIDEALSILLLL 571
Query: 363 STHPKAVEEMGDLGPVPFLLGNIRETTSERSKENCVAMLYTICYNDRTKWKEIREDERVN 422
++HP+ + +G L + L+ IR+ T ++KE ++L + N+ + + V
Sbjct: 572 ASHPEGRQAIGQLSFIETLVEFIRQGTP-KNKECATSVLLELGSNN-SSFILAALQFGVY 629
Query: 423 GTLSKLAQCGTSRAKRKASGILERVNR 449
L ++ GT+RA+RKA+ +++ +++
Sbjct: 630 EYLVEITTSGTNRAQRKANALIQLISK 656
>AT1G29340.1 | Symbols: PUB17, ATPUB17 | plant U-box 17 |
chr1:10264412-10266601 FORWARD LENGTH=729
Length = 729
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 126/388 (32%), Positives = 184/388 (47%), Gaps = 21/388 (5%)
Query: 77 PTEFRCPISTQLMTDPVILSTGQTYDRPFIQRWLNEEGHRTCPQTQQVLSHSILIPNFLV 136
P +F CPIS LMTDPVI+STGQTYDR I RW+ EEGH TCP+T Q+L S ++PN +
Sbjct: 306 PKDFVCPISLDLMTDPVIISTGQTYDRNSIARWI-EEGHCTCPKTGQMLMDSRIVPNRAL 364
Query: 137 REMITKWCKDRGIEMPKPVRDV-DEAV-----TKADRHRXXXXXXXXXXXXXD-----QK 185
+ +I +WC GI D +E+ TKA D Q
Sbjct: 365 KNLIVQWCTASGISYESEFTDSPNESFASALPTKAAVEANKATVSILIKYLADGSQAAQT 424
Query: 186 EAAKELRLLTKRIATFRTLFGESGVIARLLSPLSPGRTCADPDLHEDLITTVLNLSINDD 245
AA+E+RLL K R E+G I L L+ A E+ +T +LNLSI +
Sbjct: 425 VAAREIRLLAKTGKENRAYIAEAGAIPHLCRLLTSENAIA----QENSVTAMLNLSIYEK 480
Query: 246 NKKVLGEDPAVISLLIDALKSG-TIQTRSNXXXXXXXXXXL-DSNKHIIGKSGAIKHLID 303
NK + E+ + ++ L SG T++ + N + + K I ++ L
Sbjct: 481 NKSRIMEEGDCLESIVSVLVSGLTVEAQENAAATLFSLSAVHEYKKRIAIVDQCVEALAL 540
Query: 304 LLDDGHPLAVKDAASAIFNICVMHENKGIAVQEGAVRVIMKKIKDNIIVDELLAILALLS 363
LL +G P KDA +A++N+ +N ++ G V ++ +K+ + +E LALL
Sbjct: 541 LLQNGTPRGKKDAVTALYNLSTHPDNCSRMIEGGGVSSLVGALKNEGVAEEAAGALALLV 600
Query: 364 THPKAVEEMG-DLGPVPFLLGNIRETTSERSKENCVAMLYTICYNDRTKWKE-IREDERV 421
E +G + V L+G +R T R KEN VA L +C + E + +
Sbjct: 601 RQSLGAEAIGKEDSAVAGLMGMMRCGTP-RGKENAVAALLELCRSGGAAVAEKVLRAPAI 659
Query: 422 NGTLSKLAQCGTSRAKRKASGILERVNR 449
G L L GT RA+RKA+ + R
Sbjct: 660 AGLLQTLLFTGTKRARRKAASLARVFQR 687
>AT5G01830.1 | Symbols: | ARM repeat superfamily protein |
chr5:320983-323007 FORWARD LENGTH=674
Length = 674
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 184/397 (46%), Gaps = 27/397 (6%)
Query: 66 RTASFSDKFDPPTEFRCPISTQLMTDPVILSTGQTYDRPFIQRWLNEEGHRTCPQTQQVL 125
R S SD + P +FRCPI+ +LM DPV+++TGQTYDR I W+ + GH TCP+T QVL
Sbjct: 265 RHQSLSDA-NIPADFRCPITLELMRDPVVVATGQTYDRESIDLWI-QSGHNTCPKTGQVL 322
Query: 126 SHSILIPNFLVREMITKWCKDRGIEM---------PKPVRDVDEAVTKADRHRXXXXXXX 176
H+ L+PN ++ +I WC+D+ I P P ++ E +
Sbjct: 323 KHTSLVPNRALKNLIVLWCRDQKIPFELYGDGGGEPAPCKEAVEFT------KMMVSFLI 376
Query: 177 XXXXXXDQKEAAKELRLLTKRIATFRTLFGESGVIARLLSPLSPGRTCADPDLHEDLITT 236
D ELR L K R E+G I +L+ L+ C P L + +TT
Sbjct: 377 EKLSVADSNGVVFELRALAKSDTVARACIAEAGAIPKLVRYLAT--EC--PSLQINAVTT 432
Query: 237 VLNLSINDDNKKVLGEDPAVISLLIDALKSG-TIQTRSNXXXXXXXXXXLDSNKHIIG-K 294
+LNLSI + NK + E ++ +I+ L+SG T + ++N + + + +G K
Sbjct: 433 ILNLSILEQNKTRIMETDGALNGVIEVLRSGATWEAKANAAATLFSLAGVSAYRRRLGRK 492
Query: 295 SGAIKHLIDLLDDGHPLAVKDAASAIFNICVMHENKGIAVQEGAVRVIMKKIKDNIIVDE 354
+ + L+DL G + +DA AI N+ EN G V+ G + ++
Sbjct: 493 ARVVSGLVDLAKQGPTSSKRDALVAILNLVAERENVGRFVEAGVMGAAGDAFQELPEEAV 552
Query: 355 LLAILALLSTHPKAVEEMGDLGPVPFLLGNIRETTSERSKENCVAMLYTICYNDRTKW-K 413
+ + AV L LLG + ++ ++E+ A L T+C ++
Sbjct: 553 AVVEAVVRRGGLMAVSAAFSL---IRLLGEVMREGADTTRESAAATLVTMCRKGGSELVA 609
Query: 414 EIREDERVNGTLSKLAQCGTSRAKRKASGILERVNRF 450
E+ + + ++ GT+R RKA+ ++ + R+
Sbjct: 610 EMAAIPGIERVIWEMIGAGTARGGRKAASLMRYLRRW 646
>AT2G23140.2 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr2:9845696-9848762 REVERSE LENGTH=826
Length = 826
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 97/262 (37%), Positives = 141/262 (53%), Gaps = 8/262 (3%)
Query: 184 QKEAAKELRLLTKRIATFRTLFGESGVIARLLSPLSPGRTCADPDLHEDLITTVLNLSIN 243
Q++A ELRLL K R + G SG I L+ L D E+ +T +LNLSIN
Sbjct: 558 QRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELL----YSTDSATQENAVTALLNLSIN 613
Query: 244 DDNKKVLGEDPAVISLLIDALKSGTIQTRSNXXXXXXXXXXLDSNKHIIGKSGAIKHLID 303
D+NKK + D I LI L++G+ + + N ++ NK IG+SGAI L+D
Sbjct: 614 DNNKKAIA-DAGAIEPLIHVLENGSSEAKENSAATLFSLSVIEENKIKIGQSGAIGPLVD 672
Query: 304 LLDDGHPLAVKDAASAIFNICVMHENKGIAVQEGAVRVIMKKIKDNI-IVDELLAILALL 362
LL +G P KDAA+A+FN+ + ENK + VQ GAVR ++ + +VD+ +A+LA L
Sbjct: 673 LLGNGTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLIDLMDPAAGMVDKAVAVLANL 732
Query: 363 STHPKAVEEMGDLGPVPFLLGNIRETTSERSKENCVAMLYTICYNDRTKWKEIREDERVN 422
+T P+ +G G +P L+ + E S R KEN A L + N + ++ V
Sbjct: 733 ATIPEGRNAIGQEGGIPLLV-EVVELGSARGKENAAAALLQLSTNSGRFCNMVLQEGAV- 790
Query: 423 GTLSKLAQCGTSRAKRKASGIL 444
L L+Q GT RA+ KA +L
Sbjct: 791 PPLVALSQSGTPRAREKAQALL 812
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 59/76 (77%), Gaps = 1/76 (1%)
Query: 79 EFRCPISTQLMTDPVILSTGQTYDRPFIQRWLNEEGHRTCPQTQQVLSHSILIPNFLVRE 138
+F CP+S ++MTDPVI+S+GQTY++ FI+RW+ + G + CP+T+Q L+H+ LIPN+ V+
Sbjct: 233 DFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWI-DLGLKVCPKTRQTLTHTTLIPNYTVKA 291
Query: 139 MITKWCKDRGIEMPKP 154
+I WC+ +++P P
Sbjct: 292 LIANWCETNDVKLPDP 307
>AT2G23140.1 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr2:9845696-9849105 REVERSE LENGTH=829
Length = 829
Score = 148 bits (373), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 97/262 (37%), Positives = 141/262 (53%), Gaps = 8/262 (3%)
Query: 184 QKEAAKELRLLTKRIATFRTLFGESGVIARLLSPLSPGRTCADPDLHEDLITTVLNLSIN 243
Q++A ELRLL K R + G SG I L+ L D E+ +T +LNLSIN
Sbjct: 561 QRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELL----YSTDSATQENAVTALLNLSIN 616
Query: 244 DDNKKVLGEDPAVISLLIDALKSGTIQTRSNXXXXXXXXXXLDSNKHIIGKSGAIKHLID 303
D+NKK + D I LI L++G+ + + N ++ NK IG+SGAI L+D
Sbjct: 617 DNNKKAIA-DAGAIEPLIHVLENGSSEAKENSAATLFSLSVIEENKIKIGQSGAIGPLVD 675
Query: 304 LLDDGHPLAVKDAASAIFNICVMHENKGIAVQEGAVRVIMKKIKDNI-IVDELLAILALL 362
LL +G P KDAA+A+FN+ + ENK + VQ GAVR ++ + +VD+ +A+LA L
Sbjct: 676 LLGNGTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLIDLMDPAAGMVDKAVAVLANL 735
Query: 363 STHPKAVEEMGDLGPVPFLLGNIRETTSERSKENCVAMLYTICYNDRTKWKEIREDERVN 422
+T P+ +G G +P L+ + E S R KEN A L + N + ++ V
Sbjct: 736 ATIPEGRNAIGQEGGIPLLV-EVVELGSARGKENAAAALLQLSTNSGRFCNMVLQEGAV- 793
Query: 423 GTLSKLAQCGTSRAKRKASGIL 444
L L+Q GT RA+ KA +L
Sbjct: 794 PPLVALSQSGTPRAREKAQALL 815
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 59/76 (77%), Gaps = 1/76 (1%)
Query: 79 EFRCPISTQLMTDPVILSTGQTYDRPFIQRWLNEEGHRTCPQTQQVLSHSILIPNFLVRE 138
+F CP+S ++MTDPVI+S+GQTY++ FI+RW+ + G + CP+T+Q L+H+ LIPN+ V+
Sbjct: 236 DFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWI-DLGLKVCPKTRQTLTHTTLIPNYTVKA 294
Query: 139 MITKWCKDRGIEMPKP 154
+I WC+ +++P P
Sbjct: 295 LIANWCETNDVKLPDP 310
>AT1G60190.1 | Symbols: | ARM repeat superfamily protein |
chr1:22198403-22200463 FORWARD LENGTH=686
Length = 686
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 196/392 (50%), Gaps = 27/392 (6%)
Query: 79 EFRCPISTQLMTDPVILSTGQTYDRPFIQRWLNEEGHRTCPQTQQVLSHSILIPNFLVRE 138
+ RCPIS ++M+DPV+L +G TYDR I +W G+ TCP+T + L ++L+ NF V++
Sbjct: 281 DLRCPISLEIMSDPVVLESGHTYDRSSITKWF-ASGNITCPKTGKTLVSTVLVDNFSVKQ 339
Query: 139 MITKWCKDRGIEMPKPVR---DVDEAVTKADRHRXXXXXXXXXXXXXDQKEAAK---ELR 192
+I + K G+ M + + DV E++ + + D++E K E+R
Sbjct: 340 VIQSYSKQNGVVMGQKGKKKVDVAESLAAEEAGKLTAEFLAGELIKGDEEEMVKALVEIR 399
Query: 193 LLTKRIATFRTLFGESGVIARLLSPLSPGRTCADPDLHEDLITTVLNLSINDDNK-KVLG 251
+LTK +R+ E+GV+ L+ L DP + E+ + ++NLS + K +++G
Sbjct: 400 ILTKTSTFYRSCLVEAGVVESLMKILRSD----DPRIQENAMAGIMNLSKDIAGKTRIVG 455
Query: 252 EDPAVISLLIDALKSGT-IQTRSNXXXXXXXXXXLDSNKHIIGK-SGAIKHLIDLLD--D 307
ED + L+++ L G ++R L +IG+ S AI L+ ++ D
Sbjct: 456 EDGGGLRLIVEVLNDGARRESRQYAAAALFYLSSLGDYSRLIGEISDAIPGLVRIVKSCD 515
Query: 308 GHPLAVKDAASAIFNICVMH-ENKGIAVQEGAVRVIMKKIKDNIIVDEL----LAILALL 362
A ++A AI ++ + +N + G V V++ +K I D + +AILA +
Sbjct: 516 YGDSAKRNALIAIRSLLMNQPDNHWRILAAGIVPVLLDLVKSEEISDGVTADSMAILAKM 575
Query: 363 STHPK---AVEEMGDLGPVPFLLGNIRETTSERSKENCVAMLYTICYNDRTK-WKEIRED 418
+ +P +V G L +LG+ S +K++CVA+L +C+N + + ++
Sbjct: 576 AEYPDGMISVLRRGGLKLAVKILGS--SEVSPATKQHCVALLLNLCHNGGSDVVGSLAKN 633
Query: 419 ERVNGTLSKLAQCGTSRAKRKASGILERVNRF 450
+ G+L + G +KAS +++ ++ F
Sbjct: 634 PSIMGSLYTASSNGELGGGKKASALIKMIHEF 665
>AT3G01400.1 | Symbols: | ARM repeat superfamily protein |
chr3:151920-152987 FORWARD LENGTH=355
Length = 355
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/275 (33%), Positives = 157/275 (57%), Gaps = 9/275 (3%)
Query: 183 DQKEAAKELRLLTKRIATFRTLFGESGVIARLLSPLSPGRTCADPDLHEDLITTVLNLSI 242
+QK+AA E+RLL+K R ++G I L+S +S +D L E +T +LNLS+
Sbjct: 79 EQKQAAMEIRLLSKNKPENRIKIAKAGAIKPLISLIS----SSDLQLQEYGVTAILNLSL 134
Query: 243 NDDNKKVLGEDPAVISLLIDALKSGTIQTRSNXXXXXXXXXXLDSNKHIIGKSGAIKHLI 302
D+NK+ + A I L+ ALK GT + N ++ NK IG+SGAI L+
Sbjct: 135 CDENKESIASSGA-IKPLVRALKMGTPTAKENAACALLRLSQIEENKVAIGRSGAIPLLV 193
Query: 303 DLLDDGHPLAVKDAASAIFNICVMHENKGIAVQEGAVRVIMKKIKD--NIIVDELLAILA 360
+LL+ G A KDA++A++++C ENK AVQ G ++ +++ + D + +VD+ +++
Sbjct: 194 NLLETGGFRAKKDASTALYSLCSAKENKIRAVQSGIMKPLVELMADFGSNMVDKSAFVMS 253
Query: 361 LLSTHPKAVEEMGDLGPVPFLLGNIRETTSERSKENCVAMLYTICYNDRTKWKEIREDER 420
LL + P++ + + G VP L+ I E ++R KE V++L +C + ++ + E
Sbjct: 254 LLMSVPESKPAIVEEGGVPVLV-EIVEVGTQRQKEMAVSILLQLC-EESVVYRTMVAREG 311
Query: 421 VNGTLSKLAQCGTSRAKRKASGILERVNRFFSLTH 455
L L+Q GTSRAK+KA ++E + + S+++
Sbjct: 312 AIPPLVALSQAGTSRAKQKAEALIELLRQPRSISN 346
>AT5G67340.1 | Symbols: | ARM repeat superfamily protein |
chr5:26864996-26867450 FORWARD LENGTH=707
Length = 707
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 142/265 (53%), Gaps = 11/265 (4%)
Query: 184 QKEAAKELRLLTKRIATFRTLFGESGVIARLLSPLSPGRTCADPDLHEDLITTVLNLSIN 243
Q+EA +R+L + R + I L+S L D + D +T +LNLSIN
Sbjct: 438 QREATARIRILARNSTDNRIVIARCEAIPSLVSLL----YSTDERIQADAVTCLLNLSIN 493
Query: 244 DDNKKVLGEDPAVISLLIDALKSGTIQ-TRSNXXXXXXXXXXLDSNKHIIGKSGAIKHLI 302
D+NK ++ E A++ L I LK+G ++ ++N ++ K IG++GAI+ L+
Sbjct: 494 DNNKSLIAESGAIVPL-IHVLKTGYLEEAKANSAATLFSLSVIEEYKTEIGEAGAIEPLV 552
Query: 303 DLLDDGHPLAVKDAASAIFNICVMHENKGIAVQEGAVRVIMKKIKDNI-IVDELLAILAL 361
DLL G KDAA+A+FN+ + HENK ++ GAVR +++ + +V++ + +LA
Sbjct: 553 DLLGSGSLSGKKDAATALFNLSIHHENKTKVIEAGAVRYLVELMDPAFGMVEKAVVVLAN 612
Query: 362 LSTHPKAVEEMGDLGPVPFLLGNIRETTSERSKENCVAMLYTIC-YNDRTKWKEIREDER 420
L+T + +G+ G +P L+ + E S R KEN A L +C ++ + IRE
Sbjct: 613 LATVREGKIAIGEEGGIPVLV-EVVELGSARGKENATAALLQLCTHSPKFCNNVIREG-- 669
Query: 421 VNGTLSKLAQCGTSRAKRKASGILE 445
V L L + GT+R K KA +L+
Sbjct: 670 VIPPLVALTKSGTARGKEKAQNLLK 694
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 159/364 (43%), Gaps = 45/364 (12%)
Query: 77 PTEFRCPISTQLMTDPVILSTGQTYDRPFIQRWLNEEGHRTCPQTQQVLSHSILIPNFLV 136
P++FRC +S +LMTDPVI+++GQT++R FIQ+W++ G CP+T+Q LSH+ L PNF+V
Sbjct: 241 PSDFRCSLSLELMTDPVIVASGQTFERVFIQKWID-MGLMVCPKTRQALSHTTLTPNFIV 299
Query: 137 REMITKWCKDRGIEMPKPVRDVDEAVTKADRHRXXXXXXXXXXXXXDQKEA--AKELRLL 194
R + WC+ + P P+ E + ++ E+ A+ELR +
Sbjct: 300 RAFLASWCETNNVYPPDPL----ELIHSSEPFPLLVESVRASSSENGHSESLDAEELRQV 355
Query: 195 TKRIATFRTLFGESGVIARLLSPLSPGRTCADPDL-----------HEDLITTVL----- 238
R A+ + E + + + R+ + H +I +
Sbjct: 356 FSRSASAPGIVSEVVCKTKRNNNAAADRSLTRSNTPWKFPEERHWRHPGIIPATVRETGS 415
Query: 239 NLSINDDNKKVLGEDPAVISLLIDALKSGTIQT-RSNXXXXXXXXXXLDSNKHIIGKSGA 297
+ SI + KK LID LKS ++ T R N+ +I + A
Sbjct: 416 SSSIETEVKK-----------LIDDLKSSSLDTQREATARIRILARNSTDNRIVIARCEA 464
Query: 298 IKHLIDLLDDGHPLAVKDAASAIFNICVMHENKGIAVQEGAVRVIMKKIKDNIIVD---- 353
I L+ LL DA + + N+ + NK + + GA+ ++ +K + +
Sbjct: 465 IPSLVSLLYSTDERIQADAVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKAN 524
Query: 354 --ELLAILALLSTHPKAVEEMGDLGPVPFLLGNIRETTSERSKENCVAMLYTICYNDRTK 411
L L+++ + + E G + P+ LLG + S K++ L+ + + K
Sbjct: 525 SAATLFSLSVIEEYKTEIGEAGAIEPLVDLLG----SGSLSGKKDAATALFNLSIHHENK 580
Query: 412 WKEI 415
K I
Sbjct: 581 TKVI 584
>AT5G58680.1 | Symbols: | ARM repeat superfamily protein |
chr5:23708247-23709320 REVERSE LENGTH=357
Length = 357
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 152/266 (57%), Gaps = 10/266 (3%)
Query: 183 DQKEAAKELRLLTKRIATFRTLFGESGVIARLLSPLSPGRTCADPDLHEDLITTVLNLSI 242
+QK+AA E+RLL+K R ++G I L+S +S +D L E +T VLNLS+
Sbjct: 77 EQKQAAMEIRLLSKNKPENRIKLAKAGAIKPLVSLISS----SDLQLQEYGVTAVLNLSL 132
Query: 243 NDDNKKVLGEDPAVISLLIDALKSGTIQTRSNXXXXXXXXXXLDSNKHIIGKSGAIKHLI 302
D+NK+++ AV L++AL+ GT T+ N ++ NK IG+SGAI L+
Sbjct: 133 CDENKEMIVSSGAV-KPLVNALRLGTPTTKENAACALLRLSQVEENKITIGRSGAIPLLV 191
Query: 303 DLLDDGHPLAVKDAASAIFNICVMHENKGIAVQEGAVRVIMKKIKD--NIIVDELLAILA 360
+LL++G A KDA++A++++C +ENK AV+ G ++ +++ + D + +VD+ ++
Sbjct: 192 NLLENGGFRAKKDASTALYSLCSTNENKTRAVESGIMKPLVELMIDFESDMVDKSAFVMN 251
Query: 361 LLSTHPKAVEEMGDLGPVPFLLGNIRETTSERSKENCVAMLYTICYNDRTKWKEIREDER 420
LL + P++ + + G VP L+ I E ++R KE V++L +C + ++ + E
Sbjct: 252 LLMSAPESKPAVVEEGGVPVLV-EIVEAGTQRQKEISVSILLQLC-EESVVYRTMVAREG 309
Query: 421 VNGTLSKLAQCGTSR-AKRKASGILE 445
L L+Q SR AK KA ++E
Sbjct: 310 AVPPLVALSQGSASRGAKVKAEALIE 335
>AT3G19380.1 | Symbols: PUB25 | plant U-box 25 |
chr3:6714602-6715867 REVERSE LENGTH=421
Length = 421
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 153/355 (43%), Gaps = 24/355 (6%)
Query: 77 PTEFRCPISTQLMTDPVILSTGQTYDRPFIQRWLNEEGHRTCPQTQQVLSHSILIPNFLV 136
P FRCPIS +LM DPV + TGQTYDR I+ W++ + TCP T+ LS LIPN +
Sbjct: 15 PYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTLIPNHTL 74
Query: 137 REMITKWC---KDRGIE-MPKPVRDVDEAVTKADRHRXXXXXXXXXXXXXDQKEAAKELR 192
R +I +WC + G+E +P P + D +A + + A + LR
Sbjct: 75 RRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQ-ASAITGTHVSVRSRAAALRRLR 133
Query: 193 LLTKRIATFRTLFGESGVIARLLSPLSPGRTCADPDLHEDLITTVLNLSINDDNKKV-LG 251
+ R L L+ L T + +L + + ++ L I + N+ V +
Sbjct: 134 GFARDSDKNRVLIAAHNATEILIKILFSETTSS--ELVSESLALLVMLPITEPNQFVSIS 191
Query: 252 EDPAVISLLIDALKSGTIQTRSNXXX----XXXXXXXLDSNKHIIGKSGAIKHLIDLLDD 307
DP + L L +I+TR N D I + ++DLL +
Sbjct: 192 SDPGRVEFLTRLLFDSSIETRVNAAALIEIVSTGTKSADLKGSISNSESVFEGVLDLLRN 251
Query: 308 GHPL----AVKDAASAIFNICVMHENKGIAVQEGAVRVIMKKIK---DNIIVDELLAILA 360
P+ A+K +F +C + + IA+ GA +++ ++ D + LA +
Sbjct: 252 --PISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDRCDTERALATVE 309
Query: 361 LLSTHPKAVEEMGDLG-PVPFLLGNIRETTSERSKENCVAMLYTICYNDRTKWKE 414
LL P+ G+ VP L+ I S+R+ E L +C + +W+E
Sbjct: 310 LLCRTPEGCAAFGEHALTVPLLVKTILR-VSDRATEYAAGALLALCTAEE-RWRE 362
>AT1G27910.1 | Symbols: PUB45, ATPUB45 | plant U-box 45 |
chr1:9720962-9723975 REVERSE LENGTH=768
Length = 768
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 37 DDYTVQTADDAIATLSALKLLKKNKTRENRTASFSDKFDPPTEFRCPISTQLMTDPVILS 96
DD + D ++ LS+ N R + S PP E RCPIS QLM DPVI++
Sbjct: 245 DDAHGRAFDRQLSKLSSFNFRSCNNNRRSSQMSV-----PPEELRCPISLQLMYDPVIIA 299
Query: 97 TGQTYDRPFIQRWLNEEGHRTCPQTQQVLSHSILIPNFLVREMITKWCKDRGIEMP 152
+GQTY+R I++W + +GH TCP+T Q LSH L PN+ V+ +I+ WC+ G+++P
Sbjct: 300 SGQTYERICIEKWFS-DGHNTCPKTHQQLSHLCLTPNYCVKALISSWCEQNGVQVP 354
>AT4G21350.1 | Symbols: B80, PUB8 | plant U-box 8 |
chr4:11356143-11357267 REVERSE LENGTH=374
Length = 374
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 159/337 (47%), Gaps = 18/337 (5%)
Query: 74 FDPPTEFRCPISTQLMTDPVILSTGQTYDRPFIQRWLNEEGHRTCPQTQQVLSHS-ILIP 132
FD P +FRCPIS ++M+DPVIL +G T+DR IQ+W+ + G+RTCP T+ LS + LIP
Sbjct: 3 FDLPNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWI-DSGNRTCPITKLPLSETPYLIP 61
Query: 133 NFLVREMITKWCKDRGIEMPKPVRDVDEAVTKADRHRXXXXXXXXXXXXXDQKEAAKELR 192
N +R +I + E +P + + + + E+ L
Sbjct: 62 NHALRSLILNFAHVSLKESSRP--RTQQEHSHSQSQALISTLVSQSSSNASKLESLTRLV 119
Query: 193 LLTKRIATFRTLFGESGVIARLLSPLSPGRTCADPD---LHEDLITTVLNLSINDDNKKV 249
LTKR ++ R ESG + L C D L E ++ +LNLS+ DDNK
Sbjct: 120 RLTKRDSSIRRKVTESGAVRAALD-------CVDSCNQVLQEKSLSLLLNLSLEDDNKVG 172
Query: 250 LGEDPAVISLLIDALKSGTIQTRSNXXXXXXXXXXLDSNKHIIGKS-GAIKHLIDLLDDG 308
L D VI ++ L+ G+ ++ ++ NK IG AI L+ LL G
Sbjct: 173 LVAD-GVIRRIVTVLRVGSPDCKAIAATLLTSLAVVEVNKATIGSYPDAISALVSLLRVG 231
Query: 309 HPLAVKDAASAIFNICVMHENKGIAVQEGAVRVIMKKIKDNIIVDELLAILALLSTHPKA 368
+ K++A+A++ +C +N+ V G+V ++++ + + + +L LL
Sbjct: 232 NDRERKESATALYALCSFPDNRKRVVDCGSVPILVEAADSGL--ERAVEVLGLLVKCRGG 289
Query: 369 VEEMGDLGPVPFLLGNIRETTSERSKENCVAMLYTIC 405
EEM + +L N+ + + + + +L +C
Sbjct: 290 REEMSKVSGFVEVLVNVLRNGNLKGIQYSLFILNCLC 326
>AT3G54790.1 | Symbols: | ARM repeat superfamily protein |
chr3:20281830-20284363 REVERSE LENGTH=760
Length = 760
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 142/292 (48%), Gaps = 9/292 (3%)
Query: 155 VRDVDEAVTKADRHRXXXXXXXXXXXXXDQKEAAKELRLLTKRIATFRTLFGESGVIARL 214
V D+D++ T H + AA E+R LT R G G I L
Sbjct: 460 VHDLDDSGTMTTSHTIKLVEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGRCGAITPL 519
Query: 215 LSPLSPGRTCADPDLHEDLITTVLNLSINDDNKKVLGEDPAVISLLIDALKSGTIQTRSN 274
LS L E +T +LNLSI++ NK ++ E A I L+ L +G + + N
Sbjct: 520 LSLLYSEEKLT----QEHAVTALLNLSISELNKAMIVEVGA-IEPLVHVLNTGNDRAKEN 574
Query: 275 XXXXXXXXXXLDSNKHIIGKS-GAIKHLIDLLDDGHPLAVKDAASAIFNICVMHENKGIA 333
L N+ IG+S AI+ L++LL G KDAASA+FN+ + H+NK
Sbjct: 575 SAASLFSLSVLQVNRERIGQSNAAIQALVNLLGKGTFRGKKDAASALFNLSITHDNKARI 634
Query: 334 VQEGAVRVIMKKIKDNI-IVDELLAILALLSTHPKAVEEMGDLGPVPFLLGNIRETTSER 392
VQ AV+ +++ + ++ +VD+ +A+LA LS + + + G +P L+ + + S+R
Sbjct: 635 VQAKAVKYLVELLDPDLEMVDKAVALLANLSAVGEGRQAIVREGGIPLLVETV-DLGSQR 693
Query: 393 SKENCVAMLYTICYNDRTKWKEIREDERVNGTLSKLAQCGTSRAKRKASGIL 444
KEN ++L +C N K+ + E L L+Q GT RAK KA +L
Sbjct: 694 GKENAASVLLQLCLNS-PKFCTLVLQEGAIPPLVALSQSGTQRAKEKAQQLL 744
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Query: 77 PTEFRCPISTQLMTDPVILSTGQTYDRPFIQRWLNEEGHRTCPQTQQVLSHSILIPNFLV 136
P FRCP+ST+LM DPVI+++GQT+DR I++WL + G CP+T+QVL+H LIPN+ V
Sbjct: 239 PPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWL-DNGLAVCPRTRQVLTHQELIPNYTV 297
Query: 137 REMITKWCKDRGIEM 151
+ MI W + I +
Sbjct: 298 KAMIASWLEANRINL 312
>AT3G54790.2 | Symbols: | ARM repeat superfamily protein |
chr3:20281830-20284255 REVERSE LENGTH=724
Length = 724
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 142/292 (48%), Gaps = 9/292 (3%)
Query: 155 VRDVDEAVTKADRHRXXXXXXXXXXXXXDQKEAAKELRLLTKRIATFRTLFGESGVIARL 214
V D+D++ T H + AA E+R LT R G G I L
Sbjct: 424 VHDLDDSGTMTTSHTIKLVEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGRCGAITPL 483
Query: 215 LSPLSPGRTCADPDLHEDLITTVLNLSINDDNKKVLGEDPAVISLLIDALKSGTIQTRSN 274
LS L E +T +LNLSI++ NK ++ E A I L+ L +G + + N
Sbjct: 484 LSLLYSEEKLT----QEHAVTALLNLSISELNKAMIVEVGA-IEPLVHVLNTGNDRAKEN 538
Query: 275 XXXXXXXXXXLDSNKHIIGKS-GAIKHLIDLLDDGHPLAVKDAASAIFNICVMHENKGIA 333
L N+ IG+S AI+ L++LL G KDAASA+FN+ + H+NK
Sbjct: 539 SAASLFSLSVLQVNRERIGQSNAAIQALVNLLGKGTFRGKKDAASALFNLSITHDNKARI 598
Query: 334 VQEGAVRVIMKKIKDNI-IVDELLAILALLSTHPKAVEEMGDLGPVPFLLGNIRETTSER 392
VQ AV+ +++ + ++ +VD+ +A+LA LS + + + G +P L+ + + S+R
Sbjct: 599 VQAKAVKYLVELLDPDLEMVDKAVALLANLSAVGEGRQAIVREGGIPLLVETV-DLGSQR 657
Query: 393 SKENCVAMLYTICYNDRTKWKEIREDERVNGTLSKLAQCGTSRAKRKASGIL 444
KEN ++L +C N K+ + E L L+Q GT RAK KA +L
Sbjct: 658 GKENAASVLLQLCLNS-PKFCTLVLQEGAIPPLVALSQSGTQRAKEKAQQLL 708
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Query: 77 PTEFRCPISTQLMTDPVILSTGQTYDRPFIQRWLNEEGHRTCPQTQQVLSHSILIPNFLV 136
P FRCP+ST+LM DPVI+++GQT+DR I++WL + G CP+T+QVL+H LIPN+ V
Sbjct: 203 PPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWL-DNGLAVCPRTRQVLTHQELIPNYTV 261
Query: 137 REMITKWCKDRGIEM 151
+ MI W + I +
Sbjct: 262 KAMIASWLEANRINL 276
>AT1G10560.1 | Symbols: PUB18, ATPUB18 | plant U-box 18 |
chr1:3484613-3486706 FORWARD LENGTH=697
Length = 697
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 181/392 (46%), Gaps = 32/392 (8%)
Query: 82 CPISTQLMTDPVILSTGQTYDRPFIQRWLNEEGHRTCPQTQQVLSHSILIPNFLVREMIT 141
CPIS ++MTDPV++ TG TYDR I +W G+ TCP T ++L+ + L+ N VR++I
Sbjct: 294 CPISLEIMTDPVVIETGHTYDRSSITKWFG-SGNITCPITGKILTSTELVDNVSVRQVIR 352
Query: 142 KWCKDRGIEMPKPVRD-------VDEAVTKADRHRXXXXXXXXXXXXXDQK---EAAKEL 191
K CK GI + R V E++ + ++ A +E+
Sbjct: 353 KHCKTNGIVLAGISRRRKSHDDVVPESLAAKGAGKLIAKFLTSELINGGEEMIYRAVREI 412
Query: 192 RLLTKRIATFRTLFGESGVIARLLSPLSPGRTCADPDLHEDLITTVLNLSINDDNK-KVL 250
R+ TK + R+ ++G + LL LS D + E+ + +LNLS + K K+
Sbjct: 413 RVQTKTSSFNRSCLVKAGAVTPLLKLLSS----VDIRIQENAMAGILNLSKHVTGKSKIA 468
Query: 251 GEDPAVISLLIDALKSGT-IQTRSNXXXXXXXXXXLDSNKHIIGKS-GAIKHLIDLL--D 306
GE + +L++ L G +TR ++ +IG++ AI L++++ D
Sbjct: 469 GEG---LKILVEILNEGAKTETRLYSASALFYLSSVEDYSRLIGENPDAIPGLMNIVKGD 525
Query: 307 DGHPLAVKDAASAIFNICVMHENKGIAVQEGAVRVIMKKIKDNIIVDEL----LAILALL 362
D A + A A+ + + +N + GAV +++ ++ I L LA LA L
Sbjct: 526 DYGDSAKRSALLAVMGLLMQSDNHWRVLAAGAVPILLDLLRSGEISGGLTADCLATLAKL 585
Query: 363 STHPK---AVEEMGDLGPVPFLLGNIRETTSERSKENCVAMLYTICYN-DRTKWKEIRED 418
+ +P V G L +L + E + K++CV ++ +C N R + ++
Sbjct: 586 AEYPDGTIGVIRRGGLKLAVKILSS-SEDSPVAVKQHCVGLILNLCLNGGRDVVGVLVKN 644
Query: 419 ERVNGTLSKLAQCGTSRAKRKASGILERVNRF 450
V G+L + G +KAS ++ ++ F
Sbjct: 645 SLVMGSLYTVLSNGEYGGSKKASALIRMIHEF 676
>AT4G16490.1 | Symbols: | ARM repeat superfamily protein |
chr4:9293891-9295530 REVERSE LENGTH=472
Length = 472
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 135/265 (50%), Gaps = 11/265 (4%)
Query: 184 QKEAAKELRLLTKRIATFRTLFGESGVIARLLSPLSPGRTCADPDLHEDLITTVLNLSIN 243
++ AA +LRLL K A R L GESG I L+ P C DP E +T +LNLS++
Sbjct: 200 KRSAAAKLRLLAKNRADNRVLIGESGAIQALI----PLLRCNDPWTQEHAVTALLNLSLH 255
Query: 244 DDNKKVLGEDPAVISLLIDALKSGTIQTRSNXXXXXXXXXXLDSNKHIIGKSGAIKHLID 303
D NK V+ A+ SL + LK+GT ++ N L+ NK IG GAI L+
Sbjct: 256 DQNKAVIAAGGAIKSL-VWVLKTGTETSKQNAACALLSLALLEENKGSIGACGAIPPLVS 314
Query: 304 LLDDGHPLAVKDAASAIFNICVMHENKGIAVQEGAVRVIMKKIKD--NIIVDELLAILAL 361
LL +G KDA + ++ +C + +NK AV GAV+ ++ + + + ++ + +L+
Sbjct: 315 LLLNGSCRGKKDALTTLYKLCTLQQNKERAVTAGAVKPLVDLVAEEGTGMAEKAMVVLSS 374
Query: 362 LSTHPKAVEEMGDLGPVPFLLGNIRETTSERSKENCVAMLYTICYNDRTKWKEIREDERV 421
L+ E + + G + L+ I E S + KE + L +C +D + + + E
Sbjct: 375 LAAIDDGKEAIVEEGGIAALVEAI-EDGSVKGKEFAILTLLQLC-SDSVRNRGLLVREGA 432
Query: 422 NGTLSKLAQCG--TSRAKRKASGIL 444
L L+Q G + RAKRKA +L
Sbjct: 433 IPPLVGLSQSGSVSVRAKRKAERLL 457
>AT1G49780.1 | Symbols: PUB26 | plant U-box 26 |
chr1:18429024-18430289 REVERSE LENGTH=421
Length = 421
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 172/393 (43%), Gaps = 35/393 (8%)
Query: 77 PTEFRCPISTQLMTDPVILSTGQTYDRPFIQRWLNEEGHRTCPQTQQVLSHSILIPNFLV 136
P FRCPIS LM+DPV +STGQTYDR I W+ G+ TCP T+ LS LIPN +
Sbjct: 15 PYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWI-AMGNTTCPVTRVALSDFTLIPNHTL 73
Query: 137 REMITKWC---KDRGIE-MPKPVRDVDEAVTKADRHRXXXXXXXXXXXXXDQKEAAKELR 192
R +I +WC + G+E +P P + D ++ + + A + LR
Sbjct: 74 RRLIQEWCVANRSNGVERIPTPKQPADPISVRSLLSQ-ASAITGTHVSVRSRAAAIRRLR 132
Query: 193 LLTKRIATFRTLFGESG---VIARLLSPLSPGRTCADPDLHEDLITTVLNLSINDDNKKV 249
L + R L ++ R+L T +L + + ++ L + + +
Sbjct: 133 GLARDSEKNRVLIAGHNAREILVRILFA-DIETTSLSSELVSESLALLVLLHMTETECEA 191
Query: 250 LGEDPAVISLLIDALKSGTIQTRSNXXX----XXXXXXXLDSNKHIIGKSGAIKHLIDLL 305
+ DP+ + + L +I+ R N +D I G + ++DLL
Sbjct: 192 VASDPSRVGFMTRLLFDSSIEIRVNAAALIEMVLTGAKSMDLKLIISGSDSIFEGVLDLL 251
Query: 306 DDGHPL----AVKDAASAIFNICVMHENKGIAVQEGAVRVIMKKIK---DNIIVDELLAI 358
+ P+ A+K AIF +C++ + + +A+ GA +++ ++ D + LA
Sbjct: 252 KN--PISSRRALKIGIKAIFALCLVKQTRHLAISAGAPGILIDRLAADFDRCDTERGLAT 309
Query: 359 LALLSTHPKAVEEMGDLG-PVPFLLGNIRETTSERSKENCVAMLYTICYNDRTKWKEIRE 417
+ LL P+ G+ VP ++ I S+R+ E L +C T + R+
Sbjct: 310 VELLCRLPEGCAAFGEHALTVPLMVKTILR-VSDRATEYAAGALLALC----TAEERCRD 364
Query: 418 DERVNG-----TLSKLAQCGTSRAKRKASGILE 445
+ G L + C T RAKRKA +L+
Sbjct: 365 EAAAAGLVTQLLLLVQSDC-TERAKRKAQMLLK 396
>AT1G24330.1 | Symbols: | ARM repeat superfamily protein |
chr1:8631779-8634835 FORWARD LENGTH=771
Length = 771
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 76 PPTEFRCPISTQLMTDPVILSTGQTYDRPFIQRWLNEEGHRTCPQTQQVLSHSILIPNFL 135
PP E RCPIS QLM DPVI+++GQTY+R I++W + +GH +CP+TQQ L H L PN+
Sbjct: 275 PPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFS-DGHNSCPKTQQQLPHLSLTPNYC 333
Query: 136 VREMITKWCKDRGIEMP 152
V+ +I WC+ GI +P
Sbjct: 334 VKGLIASWCEQNGITVP 350
>AT1G67530.2 | Symbols: | ARM repeat superfamily protein |
chr1:25308229-25311081 FORWARD LENGTH=782
Length = 782
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 76 PPTEFRCPISTQLMTDPVILSTGQTYDRPFIQRWLNEEGHRTCPQTQQVLSHSILIPNFL 135
PP E RCPIS QLM DPVI+++GQTY+R I++W + +GH TCP+TQQ L H L PN
Sbjct: 272 PPEELRCPISLQLMCDPVIIASGQTYERVCIEKWFS-DGHNTCPKTQQQLPHISLTPNNC 330
Query: 136 VREMITKWCKDRGIEMP 152
V+ +I WC+ G ++P
Sbjct: 331 VKGLIASWCEQNGTQIP 347
>AT1G67530.1 | Symbols: | ARM repeat superfamily protein |
chr1:25308229-25311081 FORWARD LENGTH=782
Length = 782
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 76 PPTEFRCPISTQLMTDPVILSTGQTYDRPFIQRWLNEEGHRTCPQTQQVLSHSILIPNFL 135
PP E RCPIS QLM DPVI+++GQTY+R I++W + +GH TCP+TQQ L H L PN
Sbjct: 272 PPEELRCPISLQLMCDPVIIASGQTYERVCIEKWFS-DGHNTCPKTQQQLPHISLTPNNC 330
Query: 136 VREMITKWCKDRGIEMP 152
V+ +I WC+ G ++P
Sbjct: 331 VKGLIASWCEQNGTQIP 347
>AT5G65920.1 | Symbols: | ARM repeat superfamily protein |
chr5:26364323-26365657 REVERSE LENGTH=444
Length = 444
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 102/203 (50%), Gaps = 22/203 (10%)
Query: 77 PTEFRCPISTQLMTDPVILSTGQTYDRPFIQRWLNEEGHRTCPQTQQVLSHSILIPNFLV 136
P+ F CPIS + M DPV L TGQTY+R I +W N GH TCP T Q L ++ PN +
Sbjct: 61 PSVFICPISLEPMQDPVTLCTGQTYERSNILKWFN-IGHCTCPTTMQELWDDLVTPNKTL 119
Query: 137 REMITKWCKDRGIEMPKPVRDVD-EAVTKADRHRXXXXXXXXXXXXXDQKEAAKELR--L 193
++I W + + M K DV A+ R + A EL+ +
Sbjct: 120 HQLIYTWFSQKYVLMKKRSEDVQGRAIEILGTLRKAKGKA--------KVHALSELKQVV 171
Query: 194 LTKRIATFRTLFGESG--VIARLLSPLSPGRTCADPDLHEDLITTVLNLSINDDNKKVLG 251
+ IA +T+ E G VI+ LLSP + ++ I ++NL ++ D+K L
Sbjct: 172 MAHAIAK-KTVVDEGGVFVISSLLSPFTSHAVGSEA------IAILVNLELDSDSKAGLM 224
Query: 252 EDPAVISLLIDALKSGTIQTRSN 274
+ PA +SL++D L G+I+T+ N
Sbjct: 225 Q-PARVSLMVDMLNDGSIETKIN 246
>AT5G62560.1 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr5:25110073-25111752 FORWARD
LENGTH=559
Length = 559
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 107/214 (50%), Gaps = 6/214 (2%)
Query: 235 TTVLNLSINDDNKKVLGEDPAVISLLIDALKSGTIQTRSNXXXXXXXXXXLDSNKHIIGK 294
+V+NLS+ NK + + LLID LKSGT + + + D NK +IG
Sbjct: 298 ASVVNLSLEKQNKVKIVRS-GFVPLLIDVLKSGTTEAQEHVAGALFSLALEDENKMVIGV 356
Query: 295 SGAIKHLIDLLDDGHP-LAVKDAASAIFNICVMHENKGIAVQEGAVRVIMKKIKDNIIVD 353
GA++ L+ L A +DAA A++++ ++ N+ V+ GAV ++ ++
Sbjct: 357 LGAVEPLLHALRSSESERARQDAALALYHLSLIPSNRTRLVRAGAVPTLLSMVRSGDSTS 416
Query: 354 ELLAILALLSTHPKAVEEMGDLGPVPFLLGNIRETT---SERSKENCVAMLYTICYNDRT 410
+L +L L+ P M D V L+G +RE SE ++ENCVA+L T+C +
Sbjct: 417 RILLVLCNLAACPDGKGAMLDGNAVAILVGKLREVGGGDSEAARENCVAVLLTLCQGN-L 475
Query: 411 KWKEIREDERVNGTLSKLAQCGTSRAKRKASGIL 444
+++ + + L ++ + G R K KAS IL
Sbjct: 476 RFRGLASEAGAEEVLMEVEENGNERVKEKASKIL 509
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 15/85 (17%)
Query: 77 PTEFRCPISTQLMTDPVILSTGQTYDRPFIQRWLN-------EEGHRTCPQTQQVLSHSI 129
P EF CPI+ LM+DPV++S+GQT++R +Q N +G R S
Sbjct: 32 PPEFLCPITGFLMSDPVVVSSGQTFERLSVQVCRNLGYIPDLLDGTRP--------DLST 83
Query: 130 LIPNFLVREMITKWCKDRGIEMPKP 154
+IPN ++ I WC + ++ P+P
Sbjct: 84 VIPNLAMKSTIFSWCDRQKVDHPRP 108
>AT5G40140.1 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr5:16057347-16058999 FORWARD
LENGTH=550
Length = 550
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 114/215 (53%), Gaps = 4/215 (1%)
Query: 234 ITTVL-NLSINDDNKKVLGEDPAVISLLIDALKSGTIQTRSNXXXXXXXXXXLDSNKHII 292
+T VL NLS+ NK + ++ LID LK G+++ + + D NK I
Sbjct: 290 VTAVLVNLSLEKSNKVKIVRS-GIVPPLIDVLKCGSVEAQEHSAGVIFSLALEDENKTAI 348
Query: 293 GKSGAIKHLIDLLDDGHPLAVKDAASAIFNICVMHENKGIAVQEGAVRVIMKKIKDNIIV 352
G G ++ L+ L+ G L D+A A++++ ++ N+G V+ GAV++++ + ++
Sbjct: 349 GVLGGLEPLLHLIRVGTELTRHDSALALYHLSLVQSNRGKLVKLGAVQMLLGMVSLGQMI 408
Query: 353 DELLAILALLSTHPKAVEEMGDLGPVPFLLGNIR--ETTSERSKENCVAMLYTICYNDRT 410
+L IL +++ P + + D G V ++G +R +E ++E+CVA+LY + ++
Sbjct: 409 GRVLLILCNMASCPVSRPALLDSGGVECMVGVLRRDREVNESTRESCVAVLYGLSHDGGL 468
Query: 411 KWKEIREDERVNGTLSKLAQCGTSRAKRKASGILE 445
++K + L K+ + G RAK+KA +LE
Sbjct: 469 RFKGLAMAANAVEELVKVERSGRERAKQKARRVLE 503
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 73 KFDPPTEFRCPISTQLMTDPVILSTGQTYDRPFIQRWLNEEGHRTCPQTQQVLSHSILIP 132
K + P EF CPIS LM DP+I+S+G +Y+R + T P S +IP
Sbjct: 55 KTEIPAEFLCPISGSLMADPIIVSSGHSYERACVIACKTLGFTPTPPP-----DFSTVIP 109
Query: 133 NFLVREMITKWCKDRGIEMPKPV 155
N ++ I WC+ R PKP+
Sbjct: 110 NLALKSAIHSWCERRCFPPPKPL 132
>AT5G37490.1 | Symbols: | ARM repeat superfamily protein |
chr5:14887744-14889051 FORWARD LENGTH=435
Length = 435
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 77 PTEFRCPISTQLMTDPVILSTGQTYDRPFIQRWLNEEGHRTCPQTQQVLSHSILIPNFLV 136
P EF+CPIS LM DPVI+STG TYDR I+ W+N G++TCP T VL+ IPN +
Sbjct: 32 PPEFQCPISIDLMKDPVIISTGITYDRVSIETWIN-SGNKTCPVTNTVLTTFDQIPNHTI 90
Query: 137 REMITKWCKDRG 148
R+MI WC ++G
Sbjct: 91 RKMIQGWCVEKG 102
>AT1G66160.1 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY
protein 1 | chr1:24637218-24638513 FORWARD LENGTH=431
Length = 431
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 54/82 (65%), Gaps = 5/82 (6%)
Query: 77 PTEFRCPISTQLMTDPVILSTGQTYDRPFIQRWLNEEGHRTCPQTQQVLSHSILIPNFLV 136
P++F+CPIS +LM DPVI+++G TYDR I++W E G++TCP T VL+ IPN +
Sbjct: 34 PSQFQCPISYELMKDPVIIASGITYDRENIEKWF-ESGYQTCPVTNTVLTSLEQIPNHTI 92
Query: 137 REMITKWCKDR---GIE-MPKP 154
R MI WC GIE +P P
Sbjct: 93 RRMIQGWCGSSLGGGIERIPTP 114
>AT3G49810.1 | Symbols: | ARM repeat superfamily protein |
chr3:18474936-18476282 REVERSE LENGTH=448
Length = 448
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 18/206 (8%)
Query: 72 DKFDPPTEFRCPISTQLMTDPVILSTGQTYDRPFIQRWLNEEGHRTCPQTQQVLSHSILI 131
D D P+ F CPIS + M DPV L TGQTY+R I +W N GH TCP T Q L +
Sbjct: 60 DLQDIPSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFN-LGHLTCPTTMQELWDDTVT 118
Query: 132 PNFLVREMITKWCKDRGIEMPKPVRDVDEAVTKADRHRXXXXXXXXXXXXXDQKEAAKEL 191
PN + +I W + + M K DV + + A EL
Sbjct: 119 PNKTLHHLIYTWFSQKYVLMKKRSEDVQGRAIE-------ILGTLKKAKGQARVHALSEL 171
Query: 192 R-LLTKRIATFRTLFGESG--VIARLLSPLSPGRTCADPDLHEDLITTVLNLSINDDNKK 248
+ ++ + +T+ E G VI+ LL P + + +++ +++L ++ D+K
Sbjct: 172 KQIVIAHLMARKTVVEEGGVSVISSLLGPFT------SHAVGSEVVAILVSLDLDSDSKS 225
Query: 249 VLGEDPAVISLLIDALKSGTIQTRSN 274
L + PA +SL++D L G+ +T+ N
Sbjct: 226 GLMQ-PAKVSLIVDMLNDGSNETKIN 250
>AT3G52450.1 | Symbols: PUB22 | plant U-box 22 |
chr3:19440943-19442250 REVERSE LENGTH=435
Length = 435
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 6/89 (6%)
Query: 72 DKFDPPTEFRCPISTQLMTDPVILSTGQTYDRPFIQRWLNEEGHRTCPQTQQVLSHSILI 131
+ + P+ F CPIS +M DPVI+STG TYDR I++WL +CP T+QV++ + L
Sbjct: 3 QEIEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDLT 62
Query: 132 PNFLVREMITKWC---KDRGIE---MPKP 154
PN +R +I WC GIE PKP
Sbjct: 63 PNHTLRRLIQSWCTLNASYGIERIPTPKP 91
>AT2G35930.1 | Symbols: PUB23 | plant U-box 23 |
chr2:15083101-15084336 REVERSE LENGTH=411
Length = 411
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 128/292 (43%), Gaps = 18/292 (6%)
Query: 72 DKFDPPTEFRCPISTQLMTDPVILSTGQTYDRPFIQRWLNEEGHRTCPQTQQVLSHSILI 131
++ + P F CPIS ++M DPVI+STG TYDR I++WL +CP T+Q ++ + L
Sbjct: 8 EEIEIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADLT 67
Query: 132 PNFLVREMITKWC---KDRGIE-MPKPVRDVDEAVTKADRHRXXXXXXXXXXXXXDQKEA 187
PN +R +I WC G+E +P P + K++ + +Q +
Sbjct: 68 PNHTLRRLIQSWCTLNASYGVERIPTP----RPPICKSEIEK---LIRDSASSHENQVKC 120
Query: 188 AKELRLLTKRIATFRTLFGESGV---IARLLSPLSPGRTCADPDLHEDLITTVLNLSIND 244
K LR + AT + +GV +A ++S S + D L +L+ +
Sbjct: 121 LKRLRQIVSENATNKRCLEAAGVPEFLANIVSNDSENGSLTDEAL--NLLYHLETSETVL 178
Query: 245 DNKKVLGEDPAVISLLIDALKSGTIQTRSNXXXXXXXXXXL-DSNKHIIGKSGAIKHLID 303
N +D ++ L ++ G ++R + D + + K ++
Sbjct: 179 KNLLNNKKDNNIVKSLTKIMQRGMYESRVYATLLLKNILEVADPMQSMTLKPEVFTEVVQ 238
Query: 304 LLDDG-HPLAVKDAASAIFNICVMHENKGIAVQEGAVRVIMKKIKDNIIVDE 354
+LDD A K A + NIC N+ AV+ G + VI++ + D E
Sbjct: 239 ILDDRISQKATKAAMHILVNICPWGRNRHKAVEAGVISVIIELLMDESFTSE 290
>AT5G64660.1 | Symbols: ATCMPG2, CMPG2 | CYS, MET, PRO, and GLY
protein 2 | chr5:25842119-25843381 REVERSE LENGTH=420
Length = 420
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 50/89 (56%), Gaps = 10/89 (11%)
Query: 77 PTEFRCPISTQLMTDPVILSTGQTYDRPFIQRWLNEEGHRTCPQTQQVLSHSILIPNFLV 136
PT FRCPIS +M PV L TG TYDR IQRWL+ G+ TCP T Q+L + IPN +
Sbjct: 11 PTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLD-GGNNTCPATMQILQNKDFIPNRTL 69
Query: 137 REMITKW--------CKDRGIEMPKPVRD 157
+ +I W C + E+ P RD
Sbjct: 70 QRLIEIWSDSVRRRTCVESA-ELAAPTRD 97
>AT5G09800.1 | Symbols: | ARM repeat superfamily protein |
chr5:3043123-3044352 REVERSE LENGTH=409
Length = 409
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 77 PTEFRCPISTQLMTDPVILSTGQTYDRPFIQRWLNEEGHRTCPQTQQVLSHSILIPNFLV 136
P F+CPIS +M PV LSTG TYDR IQRWL ++G+ TCP T Q+L + +PN +
Sbjct: 12 PCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWL-DDGNNTCPATMQILQNKEFVPNLTL 70
Query: 137 REMITKW 143
+I W
Sbjct: 71 HRLIDHW 77
>AT3G18710.1 | Symbols: PUB29, ATPUB29 | plant U-box 29 |
chr3:6434234-6435481 REVERSE LENGTH=415
Length = 415
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 77 PTEFRCPISTQLMTDPVILSTGQTYDRPFIQRWLNEEGHRTCPQTQQVLSHSILIPNFLV 136
P+ F+CPIS +M PV L TG TYDR IQRWL + G+ TCP T Q+L +PN +
Sbjct: 13 PSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWL-DGGNNTCPATMQLLKTKDFVPNLTL 71
Query: 137 REMITKWCKDRG 148
+ +I W G
Sbjct: 72 QRLINIWSDSIG 83
>AT3G61390.2 | Symbols: | RING/U-box superfamily protein |
chr3:22716418-22718270 FORWARD LENGTH=435
Length = 435
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 63 RENRTASFSDKFDPPTEFRCPISTQLMTDPVILSTGQTYDRPFIQRWLNEEGHRTCPQTQ 122
RE AS S+ +PP F CPI+ +M DP + + G TY+ I RW E GH T P
Sbjct: 340 REEEEASTSNHREPPQYFICPITHDIMEDPHVAADGFTYEGEAISRWF-ERGHETSPMIN 398
Query: 123 QVLSHSILIPNFLVREMITKWCKDRG-IEMPKPVRDV 158
+ L H+ L+PN +R I +W + R + P R++
Sbjct: 399 KRLPHTSLVPNLALRSAIQEWLQLRELLNRPSACREI 435
>AT4G36550.1 | Symbols: | ARM repeat superfamily protein |
chr4:17245400-17247926 REVERSE LENGTH=718
Length = 718
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 77 PTEFRCPISTQLMTDPVILSTGQTYDRPFIQRWLNEEGHRTCPQTQQVLSHSILIPNFLV 136
P +F+C +S +M DPVI+S+G T++R IQ+W + EG+ +CP +++ L L PN +
Sbjct: 220 PEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFD-EGNDSCPISKRKLDDFTLKPNVEL 278
Query: 137 REMITKWCKDRGIEMPKPVR 156
+ I++WC G+++ P R
Sbjct: 279 KSQISEWCAKNGLDVQDPAR 298
>AT5G65200.1 | Symbols: PUB38, ATPUB38 | plant U-box 38 |
chr5:26048173-26049843 REVERSE LENGTH=556
Length = 556
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 109/227 (48%), Gaps = 12/227 (5%)
Query: 229 LHEDLITTVLNLSINDDNKKVLGEDPAVISLLIDALKSGTIQTRSNXXXXXXXXXXLDSN 288
+ + + +++NLS++ NK + + +LID LKSG+ + + + D N
Sbjct: 282 VQTNALASLVNLSLDKKNKLTIVR-LGFVPILIDVLKSGSREAQEHAAGTIFSLSLEDDN 340
Query: 289 KHIIGKSGAIKHLIDLLDDGHPLAVK-DAASAIFNICVMHENKGIAVQEGAVRVIMKKIK 347
K IG GA++ L+ L + D+A A++++ + N+ V+ GAV + ++
Sbjct: 341 KMPIGVLGALQPLLHALRAAESDRTRHDSALALYHLTLNQTNRSKLVRLGAVPALFSMVR 400
Query: 348 DNIIVDELLAILALLSTHPKAVEEMGDLGPVPFLLGNIRET---------TSERSKENCV 398
L ++ L+ + M D V L+G +RE +S ++ENCV
Sbjct: 401 SGESASRALLVICNLACCSEGRSAMLDANAVAILVGKLREEWTEEPTEARSSSSARENCV 460
Query: 399 AMLYTICYNDRTKWKEIREDERVNGTLSKLAQCGTSRAKRKASGILE 445
A L+ + + + ++K + ++ R L ++ + GT RA+ KA IL+
Sbjct: 461 AALFALSH-ESLRFKGLAKEARAVEVLKEVEERGTERAREKAKKILQ 506
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 13/86 (15%)
Query: 76 PPTEFRCPISTQLMTDPVILSTGQTYDRPFIQ--RWLN-----EEGHRTCPQTQQVLSHS 128
PP EF CPIS +M+DPV++S+GQT++R +Q R LN + + P S
Sbjct: 33 PPVEFLCPISKSVMSDPVVVSSGQTFERVCVQVCRDLNFIPKLNDDEESLPD------FS 86
Query: 129 ILIPNFLVREMITKWCKDRGIEMPKP 154
+IPN ++ I WC G+ P+P
Sbjct: 87 NIIPNLNMKSTIDTWCDTVGVSRPQP 112
>AT1G01660.1 | Symbols: | RING/U-box superfamily protein |
chr1:240057-242608 REVERSE LENGTH=568
Length = 568
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 60/104 (57%), Gaps = 6/104 (5%)
Query: 45 DDAIATLSALKLLKKNKTRENRTAS-FSDK----FDPPTEFRCPISTQLMTDPVILSTGQ 99
D A + S + LL ++ TR + T S FSD+ PP+ F CPIS ++M +P + + G
Sbjct: 461 DAASSVCSEILLLLQSYTRRHGTPSGFSDEDSVTRQPPSYFICPISQEVMREPRVAADGF 520
Query: 100 TYDRPFIQRWLNEEGHRTCPQTQQVLSHSILIPNFLVREMITKW 143
TY+ ++ WL+ GH T P T L+H+ L+PN +R I +W
Sbjct: 521 TYEAESLREWLD-NGHETSPMTNLKLAHNNLVPNHALRSAIQEW 563
>AT3G47820.1 | Symbols: PUB39 | PLANT U-BOX 39 |
chr3:17644434-17645963 FORWARD LENGTH=509
Length = 509
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 110/218 (50%), Gaps = 11/218 (5%)
Query: 236 TVLNLSINDDNK-KVLGEDPAVISLLIDALKSGTIQTRSNXXXXXXXXXXLDSNKHIIGK 294
+++NLS+ NK K++ + LLID LKSG+ + + + + NK +IG
Sbjct: 248 SIVNLSLEKPNKLKIV--RSGFVPLLIDVLKSGSTEAQEHVIGALFSLAVEEENKMVIGV 305
Query: 295 SGAIKHLIDLLDDGHP-LAVKDAASAIFNICVMHENKGIAVQEGAVRVIMKKIKDNIIVD 353
GA++ L+ L A +DAA A++++ ++ N+ V+ GAV +++ I+
Sbjct: 306 LGAVEPLLHALRSSESERARQDAALALYHLSLIPNNRSRLVKAGAVPMMLSMIRSGESAS 365
Query: 354 ELLAILALLSTHPKAVEEMGDLGPVPFLLGNIRETTSERS----KENCVAMLYTICYNDR 409
+L +L L+ + M D V L+G +RE+ S +ENCV L T+ +
Sbjct: 366 RILLLLCNLAACSEGKGAMLDGNAVSILVGKLRESGGAESDAAARENCVGALLTLSVGN- 424
Query: 410 TKWKEIREDERVNGTLSKL--AQCGTSRAKRKASGILE 445
+++ + + L+++ ++ G+ R K KAS IL+
Sbjct: 425 MRFRGLASEAGAEEILTEIVESESGSGRLKEKASKILQ 462
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 77 PTEFRCPISTQLMTDPVILSTGQTYDRPFIQRWLN-EEGHRTCPQTQQVLSHSILIPNFL 135
PTEF CPI+ LM+DPV++++GQT++R +Q N + TQ L S +IPN
Sbjct: 11 PTEFLCPITGFLMSDPVVVASGQTFERISVQVCRNLSFAPKLHDGTQPDL--STVIPNLA 68
Query: 136 VREMITKWCKDRGIEMPKP 154
++ I WC +E P+P
Sbjct: 69 MKSTILSWCDRNKMEHPRP 87
>AT4G31890.2 | Symbols: | ARM repeat superfamily protein |
chr4:15427290-15429049 REVERSE LENGTH=518
Length = 518
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 121/270 (44%), Gaps = 18/270 (6%)
Query: 187 AAKELRLLTKRIATFRTLFGESGVIARLLSPLSPGRTCADPDLHEDLITTVLNLSI-NDD 245
AA E+RLL K + R G I L+S + R D + +LNL I ND
Sbjct: 163 AASEVRLLAKEDSEARVTLAMLGAIPPLVSMIDDSRIV---DAQIASLYALLNLGIGNDA 219
Query: 246 NKKVLGEDPAVISLL--IDALKSGTIQTRSNXXXXXXXXXXLDSNKHIIGKSGAIKHLID 303
NK + + AV +L I++ + + LDSNK IIG SGAI L+
Sbjct: 220 NKAAIVKAGAVHKMLKLIESPNTPDQEIAEAVVANFLGLSALDSNKPIIGSSGAIIFLVK 279
Query: 304 LLDD----GHPLAVKDAASAIFNICVMHENKGIAVQEGAVRVIMKKIKDNIIVDELLAIL 359
L + A +DA A++N+ + N ++ + ++ + D + + +LAIL
Sbjct: 280 TLQNLDETSSSQAREDALRALYNLSIYQPNVSFILETDLITYLLNTLGDMEVSERILAIL 339
Query: 360 ALLSTHPKAVEEMGDL-GPVPFLLGNIRETTSERSKENCVAMLYTIC---YNDRTKWKEI 415
+ L P+ + +G + P L+ + T S +E +L + Y DR ++
Sbjct: 340 SNLVAVPEGRKAIGLVCDAFPVLVDVLNWTDSPGCQEKATYILMLMAHKGYGDR----QV 395
Query: 416 REDERVNGTLSKLAQCGTSRAKRKASGILE 445
+ + L +L G++ A+++AS ILE
Sbjct: 396 MIEAGIESALLELTLLGSALAQKRASRILE 425
>AT4G31890.1 | Symbols: | ARM repeat superfamily protein |
chr4:15427290-15429049 REVERSE LENGTH=518
Length = 518
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 121/270 (44%), Gaps = 18/270 (6%)
Query: 187 AAKELRLLTKRIATFRTLFGESGVIARLLSPLSPGRTCADPDLHEDLITTVLNLSI-NDD 245
AA E+RLL K + R G I L+S + R D + +LNL I ND
Sbjct: 163 AASEVRLLAKEDSEARVTLAMLGAIPPLVSMIDDSRIV---DAQIASLYALLNLGIGNDA 219
Query: 246 NKKVLGEDPAVISLL--IDALKSGTIQTRSNXXXXXXXXXXLDSNKHIIGKSGAIKHLID 303
NK + + AV +L I++ + + LDSNK IIG SGAI L+
Sbjct: 220 NKAAIVKAGAVHKMLKLIESPNTPDQEIAEAVVANFLGLSALDSNKPIIGSSGAIIFLVK 279
Query: 304 LLDD----GHPLAVKDAASAIFNICVMHENKGIAVQEGAVRVIMKKIKDNIIVDELLAIL 359
L + A +DA A++N+ + N ++ + ++ + D + + +LAIL
Sbjct: 280 TLQNLDETSSSQAREDALRALYNLSIYQPNVSFILETDLITYLLNTLGDMEVSERILAIL 339
Query: 360 ALLSTHPKAVEEMGDL-GPVPFLLGNIRETTSERSKENCVAMLYTIC---YNDRTKWKEI 415
+ L P+ + +G + P L+ + T S +E +L + Y DR ++
Sbjct: 340 SNLVAVPEGRKAIGLVCDAFPVLVDVLNWTDSPGCQEKATYILMLMAHKGYGDR----QV 395
Query: 416 REDERVNGTLSKLAQCGTSRAKRKASGILE 445
+ + L +L G++ A+++AS ILE
Sbjct: 396 MIEAGIESALLELTLLGSALAQKRASRILE 425
>AT4G25160.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr4:12903360-12906669 REVERSE
LENGTH=835
Length = 835
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 51 LSALKLLKKNKTRENRTASFSD-KFDPPTEFRCPISTQLMTDPVILSTGQTYDRPFIQRW 109
L AL+ LKK E SFS PPT F CP+ +M +P + + G TYDR I+ W
Sbjct: 742 LPALENLKK--VAEKARNSFSGVSTQPPTHFICPLLKDVMNEPCVAADGYTYDRHAIEEW 799
Query: 110 LNEEGHRTCPQTQQVLSHSILIPNFLVREMITKWCKDR 147
L E H T P T L L+PN+ + I +W R
Sbjct: 800 LKE--HNTSPMTDSPLHSKNLLPNYTLYTAIMEWRSTR 835
>AT5G51270.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:20835137-20838262 REVERSE
LENGTH=819
Length = 819
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 7/95 (7%)
Query: 51 LSALKLLKK--NKTRENRTASFSDKFDPPTEFRCPISTQLMTDPVILSTGQTYDRPFIQR 108
L L+ LKK +K R + +A+ S PP+ F CP+ +M +P I + G TYDR I+
Sbjct: 725 LPVLESLKKVADKARNSLSAAPSQ---PPSHFFCPLLKDVMKEPCIAADGYTYDRRAIEE 781
Query: 109 WLNEEGHRTCPQTQQVLSHSILIPNFLVREMITKW 143
W+ E HRT P T L + L+PN + I +W
Sbjct: 782 WM--ENHRTSPVTNSPLQNVNLLPNHTLYAAIVEW 814
>AT2G45920.1 | Symbols: | U-box domain-containing protein |
chr2:18899363-18901097 FORWARD LENGTH=400
Length = 400
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 75 DPPTEFRCPISTQLMTDPVILSTGQTYDRPFIQRWLNEEGHRTCPQTQQVLSHSILIPNF 134
+ P F CPIS ++M DP + + G TY+ I WL + GH T P T L H+ L+PN
Sbjct: 324 EAPQYFICPISLEVMKDPQLAADGFTYEAEAISTWL-QGGHETSPMTNTKLHHTKLVPNL 382
Query: 135 LVREMITKW 143
+R I +W
Sbjct: 383 ALRSAIQEW 391
>AT3G11840.1 | Symbols: PUB24 | plant U-box 24 |
chr3:3736578-3738250 REVERSE LENGTH=470
Length = 470
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Query: 72 DKFDPPTEFRCPISTQLMTDPVILSTGQTYDRPFIQRWLNEEGHRTCPQTQQVLS-HSIL 130
++ + P F CPIS ++M DPV +G TYDR I +WL E +CP T+Q L S L
Sbjct: 20 EEIEIPNYFICPISLEIMKDPVTTVSGITYDRQNIVKWL--EKVPSCPVTKQPLPLDSDL 77
Query: 131 IPNFLVREMITKWC---KDRGI 149
PN ++R +I WC + RG+
Sbjct: 78 TPNHMLRRLIQHWCVENETRGV 99
>AT1G56040.1 | Symbols: | HEAT/U-box domain-containing protein |
chr1:20960356-20962334 REVERSE LENGTH=485
Length = 485
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 72 DKFDPPTEFRCPISTQLMTDPVILSTGQTYDRPFIQRWLNEEGHRTCPQTQQVLSHSILI 131
+K PP+ F CPI+ ++M DP + G TY+ I++WL+ GH+T P T LSH L+
Sbjct: 414 EKRQPPSSFFCPITQEVMKDPHFAADGFTYEAESIRKWLS-TGHQTSPMTNLRLSHLTLV 472
Query: 132 PNFLVREMI 140
PN +R I
Sbjct: 473 PNRALRSAI 481
>AT2G25130.1 | Symbols: | ARM repeat superfamily protein |
chr2:10695243-10696959 REVERSE LENGTH=468
Length = 468
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 118/267 (44%), Gaps = 17/267 (6%)
Query: 190 ELRLLTKRIATFRTLFGESGVIARLLSPLSPGRTCADPDLHEDLITTVLNLSI-NDDNKK 248
E+RLL K R G I L+S + D + + +LNL I ND NK
Sbjct: 132 EVRLLAKDDIEARVTLAMLGAIPPLVSMIDDESQSEDALIAS--LYALLNLGIGNDVNKA 189
Query: 249 VLGEDPAVISLL--IDALKSGTIQTRSNXXXXXXXXXXLDSNKHIIGKSGAIKHLIDLLD 306
+ + V +L +++ K LDSNK IIG SGAI L+ L
Sbjct: 190 AIVKAGVVHKMLKLVESSKPPNQAIAEAIVANFLGLSALDSNKPIIGSSGAIIFLVKTLK 249
Query: 307 D----GHPLAVKDAASAIFNICVMHENKGIAVQEGAVRVIMKKIKDNIIVDELLAILALL 362
+ A +DA A++N+ + H+N ++ + ++ + D + + +LAIL +
Sbjct: 250 NFEETSSSQAREDALRALYNLSIYHQNVSFILETDLIPFLLNTLGDMEVSERILAILTNV 309
Query: 363 STHPKAVEEMGD-LGPVPFLLGNIRETTSERSKENCVAMLYTIC---YNDRTKWKEIRED 418
+ P+ + +G+ + P L+ + S + +E V +L + Y DR E
Sbjct: 310 VSVPEGRKAIGEVVEAFPILVDVLNWNDSIKCQEKAVYILMLMAHKGYGDRNAMIE---- 365
Query: 419 ERVNGTLSKLAQCGTSRAKRKASGILE 445
+ +L +L G+ A+++AS +LE
Sbjct: 366 AGIESSLLELTLVGSPLAQKRASRVLE 392
>AT1G01670.1 | Symbols: | RING/U-box superfamily protein |
chr1:242943-245163 REVERSE LENGTH=365
Length = 365
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 45 DDAIATLSAL-KLLKKNKTRENRTASFSDKFDPPTEFRCPISTQLMTDPVILSTGQTYDR 103
D+AI T L + L+K ++ + +S +PP F CPIS +M +P + + G TY+
Sbjct: 264 DEAIKTTEELLRALEKGES--SIPLQWSVSIEPPQCFICPISKDIMQNPHVAADGYTYEA 321
Query: 104 PFIQRWLNEEGHRTCPQTQQVLSHSILIPNFLVREMITKW 143
+RWLN G ++ P T L + LIPN ++R I W
Sbjct: 322 DEFRRWLNHGGEKS-PMTNLRLENRNLIPNLVLRSAIKDW 360
>AT5G65500.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:26181093-26183997 REVERSE
LENGTH=791
Length = 791
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 64 ENRTASFSDKFDP---PTEFRCPISTQLMTDPVILSTGQTYDRPFIQRWLNEEGHRTCPQ 120
E T S D+ DP P+ F CPI ++M +P + + G +Y+ IQ WL+ GH T P
Sbjct: 700 EEATNSNMDEGDPNDIPSVFMCPILQEVMKNPHVAADGFSYELEAIQEWLS-MGHDTSPM 758
Query: 121 TQQVLSHSILIPNFLVREMITKWCKDRGIE 150
T L + +L PN +R +I W R +
Sbjct: 759 TNLRLDYQMLTPNHTLRSLIQDWHSKRAAQ 788
>AT2G45910.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr2:18894520-18898212 FORWARD
LENGTH=834
Length = 834
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 77 PTEFRCPISTQLMTDPVILSTGQTYDRPFIQRWLNEEGHRTCPQTQQVLSHSILIPNFLV 136
P F CPI ++M DP + + G TY+ I+ WL+ E H T P T LSH+ LI N +
Sbjct: 764 PPYFICPIFQEVMQDPHVAADGFTYEAEAIRAWLDSE-HDTSPMTNVKLSHTSLIANHAL 822
Query: 137 REMITKWCK 145
R I +W +
Sbjct: 823 RSAIQEWLQ 831
>AT1G01680.1 | Symbols: ATPUB54, PUB54 | plant U-box 54 |
chr1:246411-248329 REVERSE LENGTH=308
Length = 308
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
Query: 59 KNKTRENRTASFSDKFDPPTE-FRCPISTQLMTDPVILSTGQTYDRPFIQRWLNEEGHRT 117
+ +T E ++ SD+ DP E F+CPIS ++M DP + + G TY+ ++WL G RT
Sbjct: 216 RKETIEKSKSNESDE-DPRLEDFKCPISMEIMRDPHVAADGFTYEAEEFRKWL-RSGGRT 273
Query: 118 CPQTQQVLSHSILIPNFLVREMITKW 143
P+T + L + L+PN +R +I W
Sbjct: 274 SPKTNKPLENHNLVPNHTLRIIIKDW 299
>AT1G66160.2 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY
protein 1 | chr1:24637218-24638513 FORWARD LENGTH=415
Length = 415
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 41/82 (50%), Gaps = 21/82 (25%)
Query: 77 PTEFRCPISTQLMTDPVILSTGQTYDRPFIQRWLNEEGHRTCPQTQQVLSHSILIPNFLV 136
P++F+CPIS +LM DP W E G++TCP T VL+ IPN +
Sbjct: 34 PSQFQCPISYELMKDP----------------WF-ESGYQTCPVTNTVLTSLEQIPNHTI 76
Query: 137 REMITKWCKDR---GIE-MPKP 154
R MI WC GIE +P P
Sbjct: 77 RRMIQGWCGSSLGGGIERIPTP 98
>AT5G61550.2 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:24748325-24751805 FORWARD
LENGTH=860
Length = 860
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 76 PPTEFRCPISTQLMTDPVILSTGQTYDRPFIQRWLNEEGHRTCPQTQQVLSHSILIPNFL 135
PP+ F CP+ +M +P + + G TYDR I+ WL ++ T P T L + LI N+
Sbjct: 775 PPSHFICPLLKGVMNEPCVAADGYTYDREAIEEWLRQKD--TSPVTNLPLPNKNLIANYT 832
Query: 136 VREMITKWCKDRGIEMPK 153
+ I +W ++ + PK
Sbjct: 833 LYSAIMEWKSNKRLNFPK 850
>AT3G03440.1 | Symbols: | ARM repeat superfamily protein |
chr3:815709-818568 FORWARD LENGTH=408
Length = 408
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 126/268 (47%), Gaps = 20/268 (7%)
Query: 187 AAKELRLLTKRIATFRTLFGESGVIARLLSPLSPGRTCADPDLHEDLITTVLNLSINDDN 246
AAKE+R LTK R F ++ + L+S L R + HE + +LNL++ D+
Sbjct: 84 AAKEIRRLTKTSHRCRRHFSQA--VEPLVSML---RFDSPESHHEAALLALLNLAVKDEK 138
Query: 247 KKVLGEDPAVISLLIDALKSGTIQTRSNXXXXXXXXXXLDSNKHIIGKSGAIKHLIDLLD 306
KV + + +I+ L+S + + +NK IIG +G + L+ ++
Sbjct: 139 NKVSIIEAGALEPIINFLQSNSPTLQEYASASLLTLSASANNKPIIGANGVVPLLVKVIK 198
Query: 307 DGHPLAVKDAASAIFNICVMHENKGIAVQEGAVRVIMKKIKDNIIVDELLA-----ILAL 361
G P A DA A+ N+ + +N + + + I+ +K + + I AL
Sbjct: 199 HGSPQAKADAVMALSNLSTLPDNLSMILATKPLSPILNLLKSSKKSSKTSEKCCSLIEAL 258
Query: 362 LSTHPKA-----VEEMGDLGPVPFLLGNIRETTSERSKENCVAMLYTICYNDRTKWKEIR 416
+ + +A +E G L V L E S +++E+ V +L T+C +DR+K++E
Sbjct: 259 MVSGEEARTGLVSDEGGVLAVVEVL-----ENGSLQAREHAVGVLLTLCQSDRSKYREPI 313
Query: 417 EDERVNGTLSKLAQCGTSRAKRKASGIL 444
E V L +L GTS+++ KA +L
Sbjct: 314 LREGVIPGLLELTVQGTSKSRIKAQRLL 341
>AT5G57035.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:23080743-23083819 FORWARD
LENGTH=789
Length = 789
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 77 PTEFRCPISTQLMTDPVILSTGQTYDRPFIQRWLNEEGHRTCPQTQQVLSHSILIPNFLV 136
PT + CPI ++M DP I + G TY+R I+ W+ + P T+ L HS L PN +
Sbjct: 709 PTHYYCPILKEIMEDPQIAADGFTYERKAIKEWIQKH-QDVSPVTKHRLKHSDLTPNHTL 767
Query: 137 REMITKW 143
R I +W
Sbjct: 768 RSAIREW 774
>AT1G76390.2 | Symbols: | ARM repeat superfamily protein |
chr1:28655914-28658531 FORWARD LENGTH=811
Length = 811
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 9/82 (10%)
Query: 71 SDKFDPPTE-----FRCPISTQLMTDPVILSTGQTYDRPFIQRWLN---EEGH-RTCPQT 121
S +F+P + F CP++ Q+M +PV L GQT++R I++W E G +CP T
Sbjct: 15 SSQFEPGIDNIYEAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPIT 74
Query: 122 QQVLSHSILIPNFLVREMITKW 143
+ LS + L P+ +R I +W
Sbjct: 75 SKELSITDLSPSIALRNTIEEW 96
>AT1G76390.1 | Symbols: | ARM repeat superfamily protein |
chr1:28655914-28658531 FORWARD LENGTH=811
Length = 811
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 9/82 (10%)
Query: 71 SDKFDPPTE-----FRCPISTQLMTDPVILSTGQTYDRPFIQRWLN---EEGH-RTCPQT 121
S +F+P + F CP++ Q+M +PV L GQT++R I++W E G +CP T
Sbjct: 15 SSQFEPGIDNIYEAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPIT 74
Query: 122 QQVLSHSILIPNFLVREMITKW 143
+ LS + L P+ +R I +W
Sbjct: 75 SKELSITDLSPSIALRNTIEEW 96
>AT3G49060.2 | Symbols: | U-box domain-containing protein kinase
family protein | chr3:18187054-18191878 REVERSE
LENGTH=795
Length = 795
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Query: 46 DAIATLSALKLLKKNKTRENRTASFSDKF---DPPTEFRCPISTQLMTDPVILSTGQTYD 102
D L + +K + + T+S++++ PP+ + CPI ++M DP+I + G TY+
Sbjct: 692 DLAVVLRFIDRMKAPEVPSSETSSYANQNVPRRPPSHYLCPIFQEVMKDPLIAADGFTYE 751
Query: 103 RPFIQRWLNEEGHRTCPQTQQVLSHSILIPNFLVREMITKW 143
I+ WL GH T P T + LIPN + I W
Sbjct: 752 AEAIREWL-ANGHDTSPMTNLKMEDCNLIPNHALHLAIQDW 791
>AT3G49060.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr3:18187386-18191878 REVERSE
LENGTH=805
Length = 805
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Query: 46 DAIATLSALKLLKKNKTRENRTASFSDKF---DPPTEFRCPISTQLMTDPVILSTGQTYD 102
D L + +K + + T+S++++ PP+ + CPI ++M DP+I + G TY+
Sbjct: 702 DLAVVLRFIDRMKAPEVPSSETSSYANQNVPRRPPSHYLCPIFQEVMKDPLIAADGFTYE 761
Query: 103 RPFIQRWLNEEGHRTCPQTQQVLSHSILIPNFLVREMITKW 143
I+ WL GH T P T + LIPN + I W
Sbjct: 762 AEAIREWL-ANGHDTSPMTNLKMEDCNLIPNHALHLAIQDW 801
>AT2G19410.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr2:8404901-8409012 REVERSE LENGTH=801
Length = 801
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 77 PTEFRCPISTQLMTDPVILSTGQTYDRPFIQRWLNEEGHRTCPQTQQVLSHSILIPNFLV 136
P+ + CPI ++M +P I + G TY+R I WL E H P T+Q L H L PN +
Sbjct: 726 PSHYFCPILREIMEEPEIAADGFTYERKAILAWL--EKHNISPVTRQKLDHFKLTPNHTL 783
Query: 137 REMITKW 143
R I W
Sbjct: 784 RSAIRDW 790
>AT5G61550.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:24748325-24751558 FORWARD
LENGTH=845
Length = 845
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 76 PPTEFRCPISTQLMTDPVILSTGQTYDRPFIQRWLNEEGHRTCPQTQQVLSHSILIPNFL 135
PP+ F CP+ +M +P + + G TYDR I+ WL ++ T P T L + LI N+
Sbjct: 775 PPSHFICPLLKGVMNEPCVAADGYTYDREAIEEWLRQKD--TSPVTNLPLPNKNLIANYT 832
Query: 136 VREMITKWCKDR 147
+ I +W ++
Sbjct: 833 LYSAIMEWKSNK 844