Miyakogusa Predicted Gene

Lj1g3v5020810.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v5020810.1 Non Chatacterized Hit- tr|D8R8L6|D8R8L6_SELML
Putative uncharacterized protein OS=Selaginella
moelle,56.47,3e-19,CMYCBINDINGP,NULL; coiled-coil,NULL; SUBFAMILY NOT
NAMED,NULL; ASSOCIATE OF C-MYC (AMY-1),Associate ,CUFF.33830.1
         (116 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G14045.2 | Symbols:  | unknown protein; Has 30201 Blast hits ...   126   3e-30
AT2G14045.1 | Symbols:  | unknown protein; Has 257 Blast hits to...   126   3e-30
AT2G14045.3 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...    97   2e-21

>AT2G14045.2 | Symbols:  | unknown protein; Has 30201 Blast hits to
           17322 proteins in 780 species: Archae - 12; Bacteria -
           1396; Metazoa - 17338; Fungi - 3422; Plants - 5037;
           Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
           BLink). | chr2:5907133-5908154 FORWARD LENGTH=122
          Length = 122

 Score =  126 bits (316), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 65/93 (69%), Positives = 75/93 (80%), Gaps = 2/93 (2%)

Query: 18  YLESSGAVDALTKVLVALYEQNDKPSSALEFIQQKLSCPSISEYEKLQAEFSDLQIRYNE 77
           YLESSG +D+LTKVLV+LYEQNDKPSSALEFIQQKL  PS+S+YEKLQAE SDLQI+YNE
Sbjct: 18  YLESSGVLDSLTKVLVSLYEQNDKPSSALEFIQQKLGGPSVSDYEKLQAEKSDLQIKYNE 77

Query: 78  LLAAHHTTCKELEEMKSSHALAMASSKETTDIE 110
           LLA H  T +EL  +KS H  +  SSK+  D E
Sbjct: 78  LLAKHQETLRELNGVKSLH--SRNSSKDDADRE 108


>AT2G14045.1 | Symbols:  | unknown protein; Has 257 Blast hits to
           257 proteins in 101 species: Archae - 0; Bacteria - 0;
           Metazoa - 130; Fungi - 0; Plants - 47; Viruses - 0;
           Other Eukaryotes - 80 (source: NCBI BLink). |
           chr2:5907133-5908154 FORWARD LENGTH=122
          Length = 122

 Score =  126 bits (316), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 65/93 (69%), Positives = 75/93 (80%), Gaps = 2/93 (2%)

Query: 18  YLESSGAVDALTKVLVALYEQNDKPSSALEFIQQKLSCPSISEYEKLQAEFSDLQIRYNE 77
           YLESSG +D+LTKVLV+LYEQNDKPSSALEFIQQKL  PS+S+YEKLQAE SDLQI+YNE
Sbjct: 18  YLESSGVLDSLTKVLVSLYEQNDKPSSALEFIQQKLGGPSVSDYEKLQAEKSDLQIKYNE 77

Query: 78  LLAAHHTTCKELEEMKSSHALAMASSKETTDIE 110
           LLA H  T +EL  +KS H  +  SSK+  D E
Sbjct: 78  LLAKHQETLRELNGVKSLH--SRNSSKDDADRE 108


>AT2G14045.3 | Symbols:  | unknown protein; FUNCTIONS IN:
          molecular_function unknown; INVOLVED IN:
          biological_process unknown; LOCATED IN:
          cellular_component unknown. | chr2:5907133-5908274
          FORWARD LENGTH=91
          Length = 91

 Score = 97.4 bits (241), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 47/56 (83%), Positives = 52/56 (92%)

Query: 18 YLESSGAVDALTKVLVALYEQNDKPSSALEFIQQKLSCPSISEYEKLQAEFSDLQI 73
          YLESSG +D+LTKVLV+LYEQNDKPSSALEFIQQKL  PS+S+YEKLQAE SDLQI
Sbjct: 18 YLESSGVLDSLTKVLVSLYEQNDKPSSALEFIQQKLGGPSVSDYEKLQAEKSDLQI 73