Miyakogusa Predicted Gene

Lj1g3v5010660.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v5010660.1 Non Chatacterized Hit- tr|B9F3T1|B9F3T1_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,43.75,0.000000000000005,PHOSPHATASE 2A REGULATORY
SUBUNIT-RELATED,NULL; seg,NULL,CUFF.33812.1
         (194 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G28850.2 | Symbols:  | Calcium-binding EF-hand family protein...   214   4e-56
AT5G28900.1 | Symbols:  | Calcium-binding EF-hand family protein...   214   4e-56
AT1G54450.1 | Symbols:  | Calcium-binding EF-hand family protein...   202   1e-52
AT5G44090.1 | Symbols:  | Calcium-binding EF-hand family protein...   180   6e-46
AT1G03960.1 | Symbols:  | Calcium-binding EF hand family protein...   162   2e-40
AT1G03960.2 | Symbols:  | Calcium-binding EF hand family protein...    64   7e-11

>AT5G28850.2 | Symbols:  | Calcium-binding EF-hand family protein |
           chr5:10877360-10881278 REVERSE LENGTH=536
          Length = 536

 Score =  214 bits (544), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 111/188 (59%), Positives = 135/188 (71%), Gaps = 5/188 (2%)

Query: 8   DAASLEVELLQLPEVSSLALKSNLAFVETLFDQWLSLPESNRLVTSLLNEAKSGAPLNVP 67
           D A L+ +LLQL E+SS  L S   F + LFDQWLSLPE+ R V SLL +A +GAP+NV 
Sbjct: 9   DMACLDADLLQLQEMSSFVLNSKPGFTQKLFDQWLSLPEAQRQVGSLLKDAVAGAPINVT 68

Query: 68  GNCSSPNATSNSLPSMFPAGTAXXXXXXXXXXXXXIVKHRVGPSNLGSPLKVVSEPVKEV 127
           G+ S  N  S ++PSMFPAG+A               K R  PSNLGS LKVV+EPVKE 
Sbjct: 69  GSASGSN--SATIPSMFPAGSAPPLSPRSCGSPRT-TKQR-APSNLGSTLKVVNEPVKEP 124

Query: 128 IPQFYFQNGRPPPNELKDQCLIRIDQLFHDHLEGLQIHEFKSITKEVCKLPSFLSTSLFR 187
           IPQFYFQNGRPPP+E+K+QC+ RI+  F+ H++GLQI EFK +T+E+CKLPSF STSLFR
Sbjct: 125 IPQFYFQNGRPPPSEIKEQCMFRINHFFYGHMDGLQIQEFKLVTREICKLPSFFSTSLFR 184

Query: 188 KID-NGTG 194
           KID N TG
Sbjct: 185 KIDLNNTG 192


>AT5G28900.1 | Symbols:  | Calcium-binding EF-hand family protein |
           chr5:10925852-10929892 FORWARD LENGTH=536
          Length = 536

 Score =  214 bits (544), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 111/188 (59%), Positives = 135/188 (71%), Gaps = 5/188 (2%)

Query: 8   DAASLEVELLQLPEVSSLALKSNLAFVETLFDQWLSLPESNRLVTSLLNEAKSGAPLNVP 67
           D A L+ +LLQL E+SS  L S   F + LFDQWLSLPE+ R V SLL +A +GAP+NV 
Sbjct: 9   DMACLDADLLQLQEMSSFVLNSKPGFTQKLFDQWLSLPEAQRQVGSLLKDAVAGAPINVT 68

Query: 68  GNCSSPNATSNSLPSMFPAGTAXXXXXXXXXXXXXIVKHRVGPSNLGSPLKVVSEPVKEV 127
           G+ S  N  S ++PSMFPAG+A               K R  PSNLGS LKVV+EPVKE 
Sbjct: 69  GSASGSN--SATIPSMFPAGSAPPLSPRSCGSPRT-TKQR-APSNLGSTLKVVNEPVKEP 124

Query: 128 IPQFYFQNGRPPPNELKDQCLIRIDQLFHDHLEGLQIHEFKSITKEVCKLPSFLSTSLFR 187
           IPQFYFQNGRPPP+E+K+QC+ RI+  F+ H++GLQI EFK +T+E+CKLPSF STSLFR
Sbjct: 125 IPQFYFQNGRPPPSEIKEQCMFRINHFFYGHMDGLQIQEFKLVTREICKLPSFFSTSLFR 184

Query: 188 KID-NGTG 194
           KID N TG
Sbjct: 185 KIDLNNTG 192


>AT1G54450.1 | Symbols:  | Calcium-binding EF-hand family protein |
           chr1:20336570-20339535 REVERSE LENGTH=535
          Length = 535

 Score =  202 bits (514), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 104/191 (54%), Positives = 137/191 (71%), Gaps = 4/191 (2%)

Query: 8   DAASLEVELLQLPEVSSLALKSNLAFVETLFDQWLSLPESNRLVTSLLNEAKSGAPLNVP 67
           ++ +L++ELLQLPE S +++KSN  FV+ LFDQWL+LPE+NRLVTSL+N+AK+G  LNV 
Sbjct: 2   ESITLDIELLQLPETSPMSMKSNQDFVKKLFDQWLALPETNRLVTSLVNDAKAGVALNVM 61

Query: 68  GNCSSPNATSNS---LPSMFPAGTAXXXXXXXXXXXXXIVKHRVGPSNLGSPLKVVSEPV 124
               S    S S   L SMFPA                I + R G SNL SPLKVVS+ V
Sbjct: 62  CGGGSSGTNSGSNSPLASMFPARNGPPLSPRNSTGSPRIARQRTGLSNLSSPLKVVSDHV 121

Query: 125 KEVIPQFYFQNGRPPPNELKDQCLIRIDQLFHDHLEGLQIHEFKSITKEVCKLPSFLSTS 184
           KE+IPQFYF++GRPPPN+LK+QC+ +I+ LF+ H +GLQ+ EFK +T E+CK+PSF STS
Sbjct: 122 KELIPQFYFEDGRPPPNDLKEQCIAKINSLFYGHEDGLQLQEFKLVTTEICKVPSFFSTS 181

Query: 185 LFRKID-NGTG 194
           +F+K+D N TG
Sbjct: 182 IFKKVDTNNTG 192


>AT5G44090.1 | Symbols:  | Calcium-binding EF-hand family protein |
           chr5:17743264-17747909 REVERSE LENGTH=538
          Length = 538

 Score =  180 bits (456), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 97/196 (49%), Positives = 130/196 (66%), Gaps = 3/196 (1%)

Query: 1   MTMEVVTDAASLEVELLQLPEVSSLALKSNLAFVETLFDQWLSLPESNRLVTSLLNEAKS 60
           M ++   D   L+ ELLQLP +S ++LK N    E LF QWLSLPE+ RLV SL+++ KS
Sbjct: 1   MEIDGGNDVQILDPELLQLPGLSPVSLKENPHIAEELFSQWLSLPETGRLVKSLIDDTKS 60

Query: 61  GAPLNVPGNCSSPN-ATSNSLPSMFPAGTAXXXXXXXXXXXXXIVKHRVGPSNLGSPLKV 119
             P++V  NC+S N A  ++LPS+F                    + +  PS L SPLK 
Sbjct: 61  STPVSVSKNCTSLNVACGSALPSVFLNSGTPPLSPRGSPGSPRFSRQKTSPS-LQSPLKS 119

Query: 120 VSEPVKEVIPQFYFQNGRPPPNELKDQCLIRIDQLFHDHLEGLQIHEFKSITKEVCKLPS 179
           V EP +++IPQFYFQ+GRPP  EL++QC+  +DQ F ++++GL + EFKSITKEVCKLPS
Sbjct: 120 VREPKRQLIPQFYFQHGRPPAKELREQCISMVDQFFSNYIDGLHMDEFKSITKEVCKLPS 179

Query: 180 FLSTSLFRKID-NGTG 194
           FLS+ LFRKID +GTG
Sbjct: 180 FLSSVLFRKIDTSGTG 195


>AT1G03960.1 | Symbols:  | Calcium-binding EF hand family protein |
           chr1:1014085-1017472 FORWARD LENGTH=529
          Length = 529

 Score =  162 bits (409), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 87/186 (46%), Positives = 117/186 (62%), Gaps = 10/186 (5%)

Query: 5   VVTDAASLEVELLQLPEVSSLALKSNLAFVETLFDQWLSLPESNRLVTSLLNEAKSGAPL 64
           V  D   L+ ELLQLP +S   LK      + LF QWLSLPE+  LV SL+++AKSG P 
Sbjct: 6   VDDDLHILDPELLQLPGLSPSPLKPTSLIADDLFSQWLSLPETATLVKSLIDDAKSGTPT 65

Query: 65  NVPGNCSSPNATSNSLPSMFPAGTAXXXXXXXXXXXXXIVKHRVGPSNLGSPLKVVSEPV 124
           N           S +LPS+F + +                + R  P +L SPL+ + EP 
Sbjct: 66  N----------KSKNLPSVFLSSSTPPLSPRSSSGSPRFSRQRTSPPSLHSPLRSLKEPK 115

Query: 125 KEVIPQFYFQNGRPPPNELKDQCLIRIDQLFHDHLEGLQIHEFKSITKEVCKLPSFLSTS 184
           +++IPQFY+Q+GRPP  ELK+QCL  +DQ+F ++++GL + EFKSITK+VCKLPSFLS +
Sbjct: 116 RQLIPQFYYQHGRPPAKELKEQCLSMVDQVFSNYIDGLHVDEFKSITKQVCKLPSFLSPA 175

Query: 185 LFRKID 190
           LFRKID
Sbjct: 176 LFRKID 181


>AT1G03960.2 | Symbols:  | Calcium-binding EF hand family protein |
           chr1:1014824-1017472 FORWARD LENGTH=389
          Length = 389

 Score = 63.5 bits (153), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 27/40 (67%), Positives = 36/40 (90%)

Query: 151 IDQLFHDHLEGLQIHEFKSITKEVCKLPSFLSTSLFRKID 190
           +DQ+F ++++GL + EFKSITK+VCKLPSFLS +LFRKID
Sbjct: 2   VDQVFSNYIDGLHVDEFKSITKQVCKLPSFLSPALFRKID 41