Miyakogusa Predicted Gene

Lj1g3v4997260.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4997260.1 Non Chatacterized Hit- tr|A5C4J5|A5C4J5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,85.56,0,seg,NULL; DBD_Tnp_Mut,Transposase, MuDR, plant; MULE,MULE
transposase domain; SWIM,Zinc finger, SWIM,CUFF.33778.1
         (754 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G64260.1 | Symbols:  | MuDR family transposase | chr1:2384775...   180   3e-45
AT1G49920.1 | Symbols:  | MuDR family transposase | chr1:1848179...   156   6e-38
AT1G64255.1 | Symbols:  | MuDR family transposase | chr1:2384495...   147   3e-35

>AT1G64260.1 | Symbols:  | MuDR family transposase |
           chr1:23847756-23849915 FORWARD LENGTH=719
          Length = 719

 Score =  180 bits (457), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 143/539 (26%), Positives = 239/539 (44%), Gaps = 34/539 (6%)

Query: 172 LAISSNYELSVGQEFPDVKSCRRALRDTAIALHFEMQTIKSDKTRFTAKCASEGCPWRIH 231
           L I  ++++ +G  F D    ++A+    I         +++K  +T +C    C W + 
Sbjct: 177 LWIDDDHDMHLGLCFKDRDELKKAVDWWCIRRRRNCIVRETEKEMYTFECVRWKCKWSLR 236

Query: 232 VAKLAGVPTFTIRTITDNHTCGGITHLGHQQASVQWVASSVEQRLRENPNCKPKEILEEI 291
            A++       I   T  HTC   +H        ++ A  +E+ +R  P     E+ +  
Sbjct: 237 AARMEEHGLVEITKYTGPHTC---SHEYPNDFESEFAADEIERVVRIQPTLSIAELKKWW 293

Query: 292 HKAHGITLSYKQAWRGKERIMATMRGSFEEGYRLLPQYCEQLKRTNPGSI---ASVYGSP 348
            +  G  L   +   GK  ++  + G  ++ +R++P+       +N   +     ++ +P
Sbjct: 294 KEKTGYELQTSKMRDGKLEVIKRVFGDEDQSFRVMPKLISAFHSSNGLLVDWQYDLFPNP 353

Query: 349 TDNCFQRLFISFQASIYGFLNACRPLLGLDRTYLKSKYLGTLLLATGFDGDGALFPVAFG 408
               F+ +F SF  SI GF   CRPL+ +D   L  KY   L++A+G D     FP+AF 
Sbjct: 354 DFASFRGVFWSFSQSIEGF-QHCRPLIVVDTKSLNGKYQLKLMIASGVDAANKFFPLAFA 412

Query: 409 VVDEENDDSWMWFLSELHNLLEINTENMPRLTILSDRQKGIVDGVEA-----NFPTAFHG 463
           V  E + DSW WF +++   +    +    L ++S   + IV  V         P A H 
Sbjct: 413 VTKEVSTDSWRWFFTKIREKVTQRKD----LCLISSPLRDIVAVVNEPGSLWQEPWAHHK 468

Query: 464 FCMRHLSDSFRKEFNNTMLVNLLWEAAHVLTVIEFESKILEIEEISQDAAYWIRRIPPRL 523
           FC+ HL   F   F +  L +L+ +A       EF+S + +I+E + +A  W+ +IP   
Sbjct: 469 FCLNHLRSQFLGVFRDYNLESLVEQAGSTNQKEEFDSYMNDIKEKNPEAWKWLDQIPRHK 528

Query: 524 WATAYFEGQRFGHLTANIVESLDTWILDASGLPIVQMTECIRRQLMTWFNERRETSMQWT 583
           WA A+  G R+G     I+E +D   L A        T  +   +M  F+E R +  +  
Sbjct: 529 WALAHDSGLRYG-----IIE-IDREALFAVCRGFPYCTVAMTGGVMLMFDELRSSFDKSL 582

Query: 584 SILVPSAERHVA------EALERART----YQVLRANEAEFEVI--SHEGTNIVDIRNRC 631
           S +  S  R V       + LE   T    Y + +     F+V   S +   IV +    
Sbjct: 583 SSIYSSLNRGVVYTEPFMDKLEEFMTDSIPYVITQLERDSFKVSESSEKEEWIVQLNVST 642

Query: 632 CLCRGWQLYGLPCAHAVAALLSCRQNVHRFTESCFTVATYRKTYSQTIHPIPDKSLWKE 690
           C CR +Q Y  PC HA+A     + N  ++ + C+TV  Y KTY+ T  P+PD + W E
Sbjct: 643 CTCRKFQSYKFPCLHALAVFEKLKINPLQYVDECYTVEQYCKTYAATFSPVPDVAAWPE 701


>AT1G49920.1 | Symbols:  | MuDR family transposase |
           chr1:18481798-18484233 REVERSE LENGTH=785
          Length = 785

 Score =  156 bits (394), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 142/559 (25%), Positives = 238/559 (42%), Gaps = 69/559 (12%)

Query: 180 LSVGQEFPDVKSCRRALRDTAIALHFEMQTIKSDKTRFTAKCASEGCPWRIHVAKLAGVP 239
           + VG  F D+   ++A+   +I    +    +++K  +  +C    C W I  ++     
Sbjct: 180 MRVGLCFKDLAEMKKAVDWCSIKRRQKCLLRETEKDVYVVECERWHCKWSICASRREEDG 239

Query: 240 TFTIRTITDNHTCGGITHLGHQQASVQWVASSVEQRLRENPNCKPKEILEEIHKAHGITL 299
            F I   +  H C    HL    A    +   +E+ +R  P     E+ +   K  G  L
Sbjct: 240 LFEITECSGPHDCYP-EHLNDFDAEC--IPFQIERVVRVQPTLSTAELDKWWEKKFGFAL 296

Query: 300 -------SYKQAWRGKERIMATMRGSFEEGYRLLPQYCEQLKRTNPGSIASVYGS----P 348
                  S       K + +    G +++ +RL+P+    L  +N   +   Y S    P
Sbjct: 297 DQVVEHCSEGLVEDAKVKAIKRFFGDWDQSFRLIPKLMSVLHSSNGLLVDWQYDSLTHDP 356

Query: 349 TDNCFQRLFISFQASIYGFLNACRPLLGLDRTYLKSKYLGTLLLATGFDGDGALFPVAFG 408
               F+ LF +F  SI GF + CRPL+ +D   L  KY   L++A+ FD     FP+AF 
Sbjct: 357 EHASFRGLFWAFSQSIQGFQH-CRPLIVVDTKNLGGKYKMKLMIASAFDATNQYFPLAFA 415

Query: 409 VVDEENDDSWMWFLSEL-------HNLLEINTENMPRLTILSDRQKGIVDGVEANFPTAF 461
           V  E + DSW WFL+ +         +  I++ +   L ++++       G +   P A+
Sbjct: 416 VTKEVSVDSWRWFLTRIREKVTQRQGICLISSPDPDILAVINE------PGSQWKEPWAY 469

Query: 462 HGFCMRHL-----SDSFRKEFNNTMLVNLLWEAAHVLTVIEFESKILEIEEISQDAAYWI 516
           H FC+ HL     S S   ++N   LV+   EA       EF+S + EI+E + +A  W+
Sbjct: 470 HRFCLYHLCSKLCSVSPGFDYNMHFLVD---EAGSSSQKEEFDSYMKEIKERNPEAWKWL 526

Query: 517 RRIPPRLWATAYFEGQRFGHLTANIVESLDTWILDASGLPIVQMTECIRRQLMTWFNERR 576
            + PP  WA A+ +G+R+G      +  +DT  L A      ++   +   +M  F + +
Sbjct: 527 DQFPPHQWALAHDDGRRYG------IMRIDTEALFAVCKRFRKVA--MAGGVMLLFGQLK 578

Query: 577 ETSMQWTSILVPSAE------RHVAEALERART----------------YQVLRANEAEF 614
           +   +   +   S +       HV E LE   T                YQV  A + + 
Sbjct: 579 DAFAESFKLSRGSLKHGDVYTEHVMEKLEEFETDSDTWVITITPLERDAYQVSMAPKKKT 638

Query: 615 EVISHEG---TNIVDIRNRCCLCRGWQLYGLPCAHAVAALLSCRQNVHRFTESCFTVATY 671
            ++       + IV + +  C C  +Q    PC HA+A     + N  ++ + C+TV  Y
Sbjct: 639 RLMGQSNDSTSGIVQLNDTTCTCGEFQKNKFPCLHALAVCDELKINPLQYVDDCYTVERY 698

Query: 672 RKTYSQTIHPIPDKSLWKE 690
            KTYS    P+P+ S W E
Sbjct: 699 HKTYSAKFSPVPELSAWPE 717


>AT1G64255.1 | Symbols:  | MuDR family transposase |
           chr1:23844954-23847206 FORWARD LENGTH=750
          Length = 750

 Score =  147 bits (371), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 127/538 (23%), Positives = 224/538 (41%), Gaps = 36/538 (6%)

Query: 177 NYELSVGQEFPDVKSCRRALRDTAIALHFEMQTIKSDKTRFTAKCASEGCPWRIHVAKLA 236
           +++L VG  F D    ++A+   ++    +    ++ K  +  +C    C W +  A++ 
Sbjct: 189 DHDLRVGLCFKDGDELKKAVDWCSLKAQQKCVVRETAKDEYIFECIRWKCKWSLGAARMK 248

Query: 237 GVPTFTIRTITDNHTCGGITHLGHQQASVQWVASSVEQRLRENPNCKPKEILEEIHKAHG 296
                 I   T  HTC  I     +    ++    +E+ +R  P     E+ +   K  G
Sbjct: 249 KHGLVEIIKYTGPHTCHPIVP---EDFKSEFETDEIERAVRYMPTQTISELKKWWKKKIG 305

Query: 297 ITLSYKQAWRGKERIMATMRGSFEEGYRLLPQYCEQLKRTNPGSI---ASVYGSPTDNCF 353
             L        KE+ +  + G +++ +   P+    L  +N   +     ++ +P    F
Sbjct: 306 YELETSDVRLAKEKAIKRVFGDWDQSFEDFPKLMSALCSSNGLLVDWKYDLFPNPNFASF 365

Query: 354 QRLFISFQASIYGFLNACRPLLGLDRTYLKSKYLGTLLLATGFDGDGALFPVAFGVVDEE 413
             +F +F  SI GF + CRPL+ +D   L  +Y   L++A+G D     FP+AF V  E 
Sbjct: 366 CGVFWAFPQSIEGFQH-CRPLIVVDTKNLNCEYQLKLMIASGVDAANKYFPLAFAVTKEV 424

Query: 414 NDDSWMWFLSELHNLLEINTENMPRLTILSDRQKGIV-----DGVEANFPTAFHGFCMRH 468
           + D W WFL+ +             L ++S     I+      G +   P A+H F + H
Sbjct: 425 STDIWRWFLTGIRE----KVTQRKGLCLISSPHPDIIAVVNESGSQWQEPWAYHRFSLNH 480

Query: 469 LSDSFRKEFNNTMLVNLLWEAAHVLTVIEFESKILEIEEISQDAAYWIRRIPPRLWATAY 528
               F + F +  L   +  A       EF S + +I+E + +A  W+ + P   WA A+
Sbjct: 481 FYSQFSRVFPSFCLGARIRRAGSTSQKDEFVSYMNDIKEKNPEARKWLDQFPQNRWALAH 540

Query: 529 FEGQRFGHLTANIVESLDTWILDASGLPIVQMTECIRRQLMTWFNERRETSMQWTSILVP 588
             G+R+G      +  ++T  L A      Q    +   ++  F+E R    +  S    
Sbjct: 541 DNGRRYG------IMEINTKALFAVCNAFEQAGHVVTGSVLLLFDELRSKFDKSFSCSRS 594

Query: 589 SAE------RHVAEALERART------YQVLRANEAEFEVIS--HEGTNIVDIRNRCCLC 634
           S          V + LE  RT      Y V   +   F+V +   +G  IV + +  C C
Sbjct: 595 SLNCGDVYTEPVMDKLEEFRTTFVTYSYIVTPLDNNAFQVATALDKGECIVQLSDCSCTC 654

Query: 635 RGWQLYGLPCAHAVAALLSCRQNVHRFTESCFTVATYRKTYSQTIHPIPDKSLWKELS 692
             +Q Y  PC HA+A     + N  ++ + C+T+   ++TY+     +P+ S W E S
Sbjct: 655 GDFQRYKFPCLHALAVCKKLKFNPLQYVDDCYTLERLKRTYATIFSHVPEMSAWPEAS 712