Miyakogusa Predicted Gene

Lj1g3v4996190.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4996190.1 tr|B9MZB6|B9MZB6_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_810462 PE=4
SV=1,82,2e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; no
description,NULL,CUFF.33909.1
         (105 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G04650.1 | Symbols:  | FAD/NAD(P)-binding oxidoreductase fami...    92   5e-20

>AT3G04650.1 | Symbols:  | FAD/NAD(P)-binding oxidoreductase family
           protein | chr3:1262017-1264343 FORWARD LENGTH=486
          Length = 486

 Score = 92.4 bits (228), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 37/50 (74%), Positives = 42/50 (84%)

Query: 21  GAALPTNTPGIPCIFDPFGRAGICGDWLLGSNIEAAVLSGVALANHVCHF 70
           GAALP NTP +PCIFDP GRAGICGDWLLGSN+E+A +SG AL NH+  F
Sbjct: 389 GAALPKNTPAVPCIFDPQGRAGICGDWLLGSNLESAAISGAALGNHIAEF 438