Miyakogusa Predicted Gene

Lj1g3v4996180.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4996180.1 Non Chatacterized Hit- tr|A5C3T9|A5C3T9_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,62.96,0.0000000003,FAD/NAD(P)-binding domain,NULL; seg,NULL;
NAD_binding_8,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
N,CUFF.33908.1
         (481 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G04650.1 | Symbols:  | FAD/NAD(P)-binding oxidoreductase fami...   612   e-175
AT1G56000.1 | Symbols:  | FAD/NAD(P)-binding oxidoreductase fami...   140   1e-33
AT1G55980.1 | Symbols:  | FAD/NAD(P)-binding oxidoreductase fami...   109   5e-24

>AT3G04650.1 | Symbols:  | FAD/NAD(P)-binding oxidoreductase family
           protein | chr3:1262017-1264343 FORWARD LENGTH=486
          Length = 486

 Score =  612 bits (1577), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 301/432 (69%), Positives = 355/432 (82%), Gaps = 10/432 (2%)

Query: 49  TRKYGTSRRSILKKTFKQEQVTFTTPISDDPLVAIIGGGISGLICALFLEKRGVRSTVFD 108
           + KYGTSRRSILKK+F QEQVTFT  +SDDP VAIIGGG++GL+CAL LE RGV+STVFD
Sbjct: 63  SSKYGTSRRSILKKSFLQEQVTFTARVSDDPHVAIIGGGMAGLVCALNLEARGVQSTVFD 122

Query: 109 TGVHGLGGRMGTRVVDSQSHPLIFDHAAQFFTVNDSRFMELVNAWMDKGLVREWEGTVGE 168
           TG+HGLGGR+GTR+++ Q   LIFDHAAQFFT +DSRF++LV+ W++KGLVREW+G VGE
Sbjct: 123 TGIHGLGGRLGTRIIEPQG--LIFDHAAQFFTADDSRFIKLVDGWLEKGLVREWKGAVGE 180

Query: 169 LQKGGQFLPFLPSPP-RYIATNGMRFVADSLLSESRMVNVVRPCWISKLEPFNGMWHLSE 227
           L+ GG F  F  S P RYIA NGMR +ADSLL ES+MVN+VRPCWISKLEP NGMWHLSE
Sbjct: 181 LEIGGSFSQFPSSSPPRYIAANGMRSLADSLLLESQMVNLVRPCWISKLEPLNGMWHLSE 240

Query: 228 NGKPCGKFDAIVIAHNGKCANRLLMTSGLPLIAKQMKSLELNSIWALLAAFEDPLPFPGS 287
           NG P G+FD IVIAHNGKCANRLL  SGLPL+AKQMK L+L+SIWALLAAF+DPLP    
Sbjct: 241 NGTPRGQFDVIVIAHNGKCANRLLSASGLPLVAKQMKKLDLSSIWALLAAFDDPLP---- 296

Query: 288 TEVPFEGAFVRGIDSVSWMANNTKKLQVSQSGGPHCWTFLSTAAYGKQNKVPQENIPAAT 347
             V FEGAFV+G++S+SWM NN+ KL   ++  PHCWTF STAAYGKQNKVPQENIP  T
Sbjct: 297 -TVNFEGAFVKGVESLSWMGNNSAKLGNGRTP-PHCWTFFSTAAYGKQNKVPQENIPTVT 354

Query: 348 TARVKAGMLEGVEAALGLSKGSLPEPFYTKLQLWGAALPTNTPGIPCIFDPFGRAGICGD 407
             +VKAGML+GVE ALGL +GSLP+P YT+LQLWGAALP NTP +PCIFDP GRAGICGD
Sbjct: 355 AEKVKAGMLQGVEIALGLPEGSLPKPVYTRLQLWGAALPKNTPAVPCIFDPQGRAGICGD 414

Query: 408 WLLGSNIEAAVLSGVALANHIADYCQSPAGSDAGEFAIGLNHEFQPLEGHDIGQFPGLVS 467
           WLLGSN+E+A +SG AL NHIA++ Q+   ++  EFAIGL+    PL GHDIGQFPGL S
Sbjct: 415 WLLGSNLESAAISGAALGNHIAEFLQN-GEANPEEFAIGLHDRLSPLAGHDIGQFPGLTS 473

Query: 468 EEKTKESQVYEL 479
             + +E+  Y+L
Sbjct: 474 VGEKEEANAYQL 485


>AT1G56000.1 | Symbols:  | FAD/NAD(P)-binding oxidoreductase family
           protein | chr1:20944149-20946101 FORWARD LENGTH=384
          Length = 384

 Score =  140 bits (354), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/371 (28%), Positives = 180/371 (48%), Gaps = 39/371 (10%)

Query: 81  VAIIGGGISGLICALFLEKRGVRSTVFDTGVHGLGGRMGTRV-VDSQSHPLIFDHAAQFF 139
           VA+IG GISG +CA  L + GV  T+FD+G  G GGRM  R  +      L+FDH A FF
Sbjct: 23  VAVIGSGISGAVCASTLARNGVSVTIFDSG-RGPGGRMSQRREIGEDGKELMFDHGAPFF 81

Query: 140 TVNDSRFMELVNAWMDKGLVREWEGTVGELQ-KGGQFLPFLP--SPPRYIATNGMRFVAD 196
            V++S  M LV+ W  +G V EW+   G       +FL         +Y+   GM  ++ 
Sbjct: 82  CVSNSDAMALVHEWESRGFVSEWKQVFGSFDCASNKFLGIQQEGDAKKYVGVPGMNSISK 141

Query: 197 SLLSESRM-----VNVVRPCWISKLEPFNGMWHLSEN-GKPCGKFDAIVIAHNGKCANRL 250
           +L +ES +       + +  W+ +  P    W L+++ G+  G+FD +V +     + R 
Sbjct: 142 ALCNESGVKSMFGTGIAKMEWLEEEIP----WLLTDSKGENLGRFDGVVASDKNIVSPRF 197

Query: 251 LMTSGL---------PLIAKQMKSLELNSIWALLAAFEDPLPFPGSTEVPFEGAFVRGID 301
              +GL         P +A +++++ +   ++L+ AF++PL     + +P +G   +  +
Sbjct: 198 TQVTGLPPPLDLSLVPELATKLQNIPVLPCFSLMLAFKEPL-----SSIPVKGLSFKNSE 252

Query: 302 SVSWMANNTKKLQVSQSGGPHCWTFLSTAAYGKQ--NKVPQENIPAATTARVKAGMLEGV 359
            +SW    + K    +S     W   ST  Y      K   + + + T  ++   M +  
Sbjct: 253 ILSWAHCESTK--PGRSTDSERWILHSTPDYANSVIAKTGLQKLSSETLNKISEEMFKEF 310

Query: 360 EAALGLSKGSLPEPFYTKLQLWGAALPTNTPGIP--CIFDPFGRAGICGDWLLGSNIEAA 417
           + +  +S  SL  PF+ K   WG+A P  +  +   C++D      ICGD+ +  N+E A
Sbjct: 311 QCSGLVS--SL--PFFMKAHRWGSAFPAKSIAVEERCLWDRNRNLAICGDFCVSPNVEGA 366

Query: 418 VLSGVALANHI 428
           +LSG+A A+ +
Sbjct: 367 ILSGLAAASKL 377


>AT1G55980.1 | Symbols:  | FAD/NAD(P)-binding oxidoreductase family
           protein | chr1:20938899-20941813 REVERSE LENGTH=466
          Length = 466

 Score =  109 bits (272), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 88/322 (27%), Positives = 151/322 (46%), Gaps = 37/322 (11%)

Query: 81  VAIIGGGISGLICALFLEKRGVRSTVFDTGVHGLGGRMGT-RVVDSQSHPLIFDHAAQFF 139
           VA+IG GISG +CA  L + GV  T+FD+G  G GGRM   R +      L+FDH A FF
Sbjct: 161 VAVIGSGISGAVCASTLARNGVSVTIFDSG-RGPGGRMSQRREIGEDGKELMFDHGAPFF 219

Query: 140 TVNDSRFMELVNAWMDKGLVREWEGTVGELQ-KGGQFLPFLP--SPPRYIATNGMRFVAD 196
            V++S  M LV+ W  +G V EW+   G       +FL         +Y+   GM  ++ 
Sbjct: 220 CVSNSDAMALVHEWESRGFVSEWKQVFGSFDCASNKFLGIQQEGDAKKYVGVPGMNSISK 279

Query: 197 SLLSESRM-----VNVVRPCWISKLEPFNGMWHLSEN-GKPCGKFDAIVIAHNGKCANRL 250
           +L +ES +       + +  W+ +  P    W L+++ G+  G+FD +V +     + R 
Sbjct: 280 ALCNESGVKSMFGTGIAKMEWLEEEIP----WLLTDSKGENLGRFDGVVASDKNIVSPRF 335

Query: 251 LMTSGL---------PLIAKQMKSLELNSIWALLAAFEDPLPFPGSTEVPFEGAFVRGID 301
              +GL         P +A +++++ +   ++L+ AF++PL     + +P +G   +  +
Sbjct: 336 TQVTGLPPPLDLSLVPELATKLQNIPVLPCFSLMLAFKEPL-----SSIPVKGLSFKNSE 390

Query: 302 SVSWMANNTKKLQVSQSGGPHCWTFLSTAAYGKQ--NKVPQENIPAATTARVKAGMLEGV 359
            +SW    + K    +S     W   ST  Y      K   + + + T  ++   M +  
Sbjct: 391 ILSWAHCESTK--PGRSTDSERWILHSTPDYANSVIAKTGLQKLSSETLNKISEEMFKEF 448

Query: 360 EAALGLSKGSLPEPFYTKLQLW 381
           + +  +S  SL  PF+ K   W
Sbjct: 449 QCSGLVS--SL--PFFMKAHRW 466