Miyakogusa Predicted Gene

Lj1g3v4984110.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4984110.1 Non Chatacterized Hit- tr|I1M0W6|I1M0W6_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,45.08,8e-17,seg,NULL,CUFF.33765.1
         (248 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G16390.1 | Symbols: DRD1, CHR35, DMS1 | SNF2 domain-containin...    63   2e-10

>AT2G16390.1 | Symbols: DRD1, CHR35, DMS1 | SNF2 domain-containing
           protein / helicase domain-containing protein |
           chr2:7097638-7101182 FORWARD LENGTH=888
          Length = 888

 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 113/263 (42%), Gaps = 49/263 (18%)

Query: 16  SGISPQGHKRLKLSSDSLPYSAHDKAVPEAPTNVEDFSNPFAISDFLNRLESGKFGSVTK 75
           +G     HKR +   D  P +   K+       V D+SNPFA+S+ L  L+SGKFGSV+K
Sbjct: 9   TGYYKNVHKRKQNQVDDGPEAKRVKS----SAKVIDYSNPFAVSNMLEALDSGKFGSVSK 64

Query: 76  DIEALITRKMQVLGPFFAKFPKLVTQSLKVVVNHDEESNKLENKKGTIMSHDKVVDL--- 132
           ++E +   +M ++      +P L            E    ++N++      + V++L   
Sbjct: 65  ELEEIADMRMDLVKRSIWLYPSLAYTVF-------EAEKTMDNQQVV----EGVINLDDD 113

Query: 133 --EEEHTKKDASAAQP----VVIIDSDEEDDRDKNSSLPFNEEMIPN------------- 173
             ++   +K A    P    +V++DSD+ED+  +     F   ++ +             
Sbjct: 114 DDDDTDVEKKALCVVPSSSEIVLLDSDDEDNERQRPMYQFQSTLVQHQKNQGDVTPLIPQ 173

Query: 174 -SLQSPALRKMGYRAPIAY----HGESEDLKFEPTRAAKDKTQRDKGVYVGVQ---XXXX 225
            S +   L + G   P A      G++   K  P    ++    +KGVYVGV+       
Sbjct: 174 CSFEEVDLGR-GKEMPSAIKAIVEGQTSRGKVLPI---ENGVVNEKGVYVGVEEDDSDNE 229

Query: 226 XXXXXXXXXXIWREMSMAVECSK 248
                     IW EM++++ECSK
Sbjct: 230 SEAADEDLGNIWNEMALSIECSK 252