Miyakogusa Predicted Gene
- Lj1g3v4984100.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4984100.1 Non Chatacterized Hit- tr|I3SVA0|I3SVA0_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2 SV,68.92,0,CAD &
PB1 domains,NULL; AUX_IAA,AUX/IAA protein;
IAA_ARF,Aux/IAA-ARF-dimerisation; seg,NULL; FAMILY ,CUFF.33764.1
(242 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G04730.1 | Symbols: IAA16 | indoleacetic acid-induced protein... 263 9e-71
AT3G23050.1 | Symbols: IAA7, AXR2 | indole-3-acetic acid 7 | chr... 238 2e-63
AT4G14550.1 | Symbols: IAA14, SLR | indole-3-acetic acid inducib... 237 4e-63
AT1G04250.1 | Symbols: AXR3, IAA17 | AUX/IAA transcriptional reg... 220 5e-58
AT3G23050.2 | Symbols: IAA7, AXR2 | indole-3-acetic acid 7 | chr... 201 3e-52
AT4G29080.1 | Symbols: PAP2, IAA27 | phytochrome-associated prot... 193 9e-50
AT5G65670.1 | Symbols: IAA9 | indole-3-acetic acid inducible 9 |... 187 4e-48
AT5G65670.2 | Symbols: IAA9 | indole-3-acetic acid inducible 9 |... 187 5e-48
AT2G22670.2 | Symbols: IAA8 | indoleacetic acid-induced protein ... 186 2e-47
AT2G22670.4 | Symbols: IAA8 | indoleacetic acid-induced protein ... 183 8e-47
AT2G22670.3 | Symbols: IAA8 | indoleacetic acid-induced protein ... 183 9e-47
AT2G22670.1 | Symbols: IAA8 | indoleacetic acid-induced protein ... 183 9e-47
AT1G04240.1 | Symbols: SHY2, IAA3 | AUX/IAA transcriptional regu... 167 6e-42
AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | AUX/IAA transcriptional... 162 2e-40
AT3G23030.1 | Symbols: IAA2 | indole-3-acetic acid inducible 2 |... 151 4e-37
AT4G14560.1 | Symbols: IAA1, AXR5 | indole-3-acetic acid inducib... 131 3e-31
AT1G15580.1 | Symbols: IAA5, ATAUX2-27, AUX2-27 | indole-3-aceti... 130 6e-31
AT3G16500.1 | Symbols: PAP1, IAA26 | phytochrome-associated prot... 122 3e-28
AT4G28640.3 | Symbols: IAA11 | indole-3-acetic acid inducible 11... 121 4e-28
AT3G15540.1 | Symbols: IAA19, MSG2 | indole-3-acetic acid induci... 121 4e-28
AT4G28640.1 | Symbols: IAA11 | indole-3-acetic acid inducible 11... 120 8e-28
AT4G28640.2 | Symbols: IAA11 | indole-3-acetic acid inducible 11... 119 2e-27
AT2G33310.3 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 119 2e-27
AT2G33310.1 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 119 2e-27
AT1G52830.1 | Symbols: IAA6, SHY1 | indole-3-acetic acid 6 | chr... 117 7e-27
AT1G04550.2 | Symbols: IAA12, BDL | AUX/IAA transcriptional regu... 117 9e-27
AT2G33310.2 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 115 2e-26
AT1G80390.1 | Symbols: IAA15 | indole-3-acetic acid inducible 15... 111 4e-25
AT1G04100.1 | Symbols: IAA10 | indoleacetic acid-induced protein... 108 2e-24
AT1G51950.1 | Symbols: IAA18 | indole-3-acetic acid inducible 18... 108 3e-24
AT5G25890.1 | Symbols: IAA28, IAR2 | indole-3-acetic acid induci... 92 4e-19
AT3G17600.1 | Symbols: IAA31 | indole-3-acetic acid inducible 31... 84 1e-16
AT2G46990.1 | Symbols: IAA20 | indole-3-acetic acid inducible 20... 75 3e-14
AT3G62100.1 | Symbols: IAA30 | indole-3-acetic acid inducible 30... 74 6e-14
AT4G32280.1 | Symbols: IAA29 | indole-3-acetic acid inducible 29... 67 7e-12
AT1G15050.1 | Symbols: IAA34 | indole-3-acetic acid inducible 34... 59 3e-09
AT2G01200.2 | Symbols: IAA32 | indole-3-acetic acid inducible 32... 58 5e-09
AT3G61830.1 | Symbols: ARF18 | auxin response factor 18 | chr3:2... 49 3e-06
AT2G46530.3 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 49 4e-06
AT2G46530.2 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 49 4e-06
AT2G46530.1 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 49 4e-06
AT5G57420.1 | Symbols: IAA33 | indole-3-acetic acid inducible 33... 48 6e-06
AT4G23980.2 | Symbols: ARF9 | auxin response factor 9 | chr4:124... 48 8e-06
AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 | chr4:124... 47 8e-06
>AT3G04730.1 | Symbols: IAA16 | indoleacetic acid-induced protein 16
| chr3:1288993-1290415 REVERSE LENGTH=236
Length = 236
Score = 263 bits (671), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 141/232 (60%), Positives = 157/232 (67%), Gaps = 8/232 (3%)
Query: 10 MIHFEETELRLGLPLSGKEGDSTLKSTLNGKRVFSDTKTVDLKLNLXXXXXXXXXXXXXX 69
MI+FE TELRLGLP G+ K+ NGKR FS+T VDLKLNL
Sbjct: 1 MINFEATELRLGLPGGNHGGEMAGKN--NGKRGFSET--VDLKLNLSSTAMDSVSKVDLE 56
Query: 70 XXXXXXRNPAKSPPAKAQVVGWPPVRSFRKNIVNVQKSNNINXXXXXXXXXXXXXXXXXX 129
+ PPAKAQVVGWPPVRSFRKN+++ QK +
Sbjct: 57 NM----KEKVVKPPAKAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSA 112
Query: 130 XXXXXXXFVKVSMDGAPYLRKVDLKLYKSYQELSEALSKMFSSFTVAKCGSQGVKDFMNE 189
+VKVSMDGAPYLRK+DLKLYK+YQ+LS ALSKMFSSFT+ G QG+KDFMNE
Sbjct: 113 SACATVAYVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGMKDFMNE 172
Query: 190 SKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSEAIGL 241
SKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFV SCKR+RIMKGSEAIGL
Sbjct: 173 SKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGL 224
>AT3G23050.1 | Symbols: IAA7, AXR2 | indole-3-acetic acid 7 |
chr3:8194768-8196716 FORWARD LENGTH=243
Length = 243
Score = 238 bits (608), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 128/236 (54%), Positives = 158/236 (66%), Gaps = 12/236 (5%)
Query: 10 MIHFEETELRLGLPLSGKEGDSTLKSTLNGKRVFSDTKTVDLKLNLXXXXXXX---XXXX 66
+++ + TEL LGLP + +S KS + KR FS+T VDL LNL
Sbjct: 5 LMNLKATELCLGLPGGAEAVESPAKSAVGSKRGFSET--VDLMLNLQSNKEGSVDLKNVS 62
Query: 67 XXXXXXXXXRNPAKSPPAKAQVVGWPPVRSFRKNIVNVQKSNNINXXXXXXXXXXXXXXX 126
++P+K PPAKAQVVGWPPVR++RKN++ QK+++
Sbjct: 63 AVPKEKTTLKDPSK-PPAKAQVVGWPPVRNYRKNMMTQQKTSS------GAEEASSEKAG 115
Query: 127 XXXXXXXXXXFVKVSMDGAPYLRKVDLKLYKSYQELSEALSKMFSSFTVAKCGSQGVKDF 186
VKVSMDGAPYLRKVDLK+YKSYQ+LS+AL+KMFSSFT+ G+QG+ DF
Sbjct: 116 NFGGGAAGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQGMIDF 175
Query: 187 MNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSEAIGLG 242
MNESKL++LLN S+YVP+YEDKDGDWMLVGDVPWEMFV SCKRLRIMKGSEA+GL
Sbjct: 176 MNESKLMNLLNSSEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAVGLA 231
>AT4G14550.1 | Symbols: IAA14, SLR | indole-3-acetic acid inducible
14 | chr4:8348521-8349923 REVERSE LENGTH=228
Length = 228
Score = 237 bits (605), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 130/233 (55%), Positives = 156/233 (66%), Gaps = 19/233 (8%)
Query: 11 IHFEETELRLGLPLSGKEGDSTLKSTLNGKRVFSDTKTVDLKLNLXXXXXXXXXXXXXXX 70
++ +ETEL LGLP + +S KS + KR FS+T VDLKLNL
Sbjct: 1 MNLKETELCLGLPGGTETVESPAKSGVGNKRGFSET--VDLKLNLQSNKQGHVDLNTNGA 58
Query: 71 XXXXX--RNPAKSPPAKAQVVGWPPVRSFRKNIVNVQKSNNINXXXXXXXXXXXXXXXXX 128
++P+K PPAKAQVVGWPPVR++RKN++ QKS
Sbjct: 59 PKEKTFLKDPSK-PPAKAQVVGWPPVRNYRKNVMANQKSGEAEEAMSSGGGTVA------ 111
Query: 129 XXXXXXXXFVKVSMDGAPYLRKVDLKLYKSYQELSEALSKMFSSFTVAKCGSQGVKDFMN 188
FVKVSMDGAPYLRKVDLK+Y SY++LS+AL+KMFSSFT+ G+QG+ DFMN
Sbjct: 112 --------FVKVSMDGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTMGSYGAQGMIDFMN 163
Query: 189 ESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSEAIGL 241
ESK++DLLN S+YVP+YEDKDGDWMLVGDVPW MFV SCKRLRIMKGSEAIGL
Sbjct: 164 ESKVMDLLNSSEYVPSYEDKDGDWMLVGDVPWPMFVESCKRLRIMKGSEAIGL 216
>AT1G04250.1 | Symbols: AXR3, IAA17 | AUX/IAA transcriptional
regulator family protein | chr1:1136382-1138340 FORWARD
LENGTH=229
Length = 229
Score = 220 bits (561), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 128/241 (53%), Positives = 150/241 (62%), Gaps = 38/241 (15%)
Query: 11 IHFEETELRLGLPLSGKEGDSTLKSTLNGKRVFSDTKTVDLKLNLXXXXXXXXXXXX--- 67
++ ETEL LGLP G T+ KR FS+T VDLKLNL
Sbjct: 7 LNLRETELCLGLP-----GGDTVAPVTGNKRGFSET--VDLKLNLNNEPANKEGSTTHDV 59
Query: 68 ----XXXXXXXXRNPAKSPPAKAQVVGWPPVRSFRKNI-VNVQKSNNINXXXXXXXXXXX 122
++PAK PPAKAQVVGWPPVRS+RKN+ V+ QKS+
Sbjct: 60 VTFDSKEKSACPKDPAK-PPAKAQVVGWPPVRSYRKNVMVSCQKSSG------------- 105
Query: 123 XXXXXXXXXXXXXXFVKVSMDGAPYLRKVDLKLYKSYQELSEALSKMFSSFTVAKCGSQ- 181
FVKVSMDGAPYLRK+DL++YKSY ELS ALS MFSSFT+ K G +
Sbjct: 106 --------GPEAAAFVKVSMDGAPYLRKIDLRMYKSYDELSNALSNMFSSFTMGKHGGEE 157
Query: 182 GVKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSEAIGL 241
G+ DFMNE KL+DL+N DYVP+YEDKDGDWMLVGDVPW MFV +CKRLR+MKGS+AIGL
Sbjct: 158 GMIDFMNERKLMDLVNSWDYVPSYEDKDGDWMLVGDVPWPMFVDTCKRLRLMKGSDAIGL 217
Query: 242 G 242
Sbjct: 218 A 218
>AT3G23050.2 | Symbols: IAA7, AXR2 | indole-3-acetic acid 7 |
chr3:8194768-8196214 FORWARD LENGTH=210
Length = 210
Score = 201 bits (512), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 110/215 (51%), Positives = 139/215 (64%), Gaps = 12/215 (5%)
Query: 10 MIHFEETELRLGLPLSGKEGDSTLKSTLNGKRVFSDTKTVDLKLNLXXXXXXX---XXXX 66
+++ + TEL LGLP + +S KS + KR FS+T VDL LNL
Sbjct: 5 LMNLKATELCLGLPGGAEAVESPAKSAVGSKRGFSET--VDLMLNLQSNKEGSVDLKNVS 62
Query: 67 XXXXXXXXXRNPAKSPPAKAQVVGWPPVRSFRKNIVNVQKSNNINXXXXXXXXXXXXXXX 126
++P+K PPAKAQVVGWPPVR++RKN++ QK+++
Sbjct: 63 AVPKEKTTLKDPSK-PPAKAQVVGWPPVRNYRKNMMTQQKTSS------GAEEASSEKAG 115
Query: 127 XXXXXXXXXXFVKVSMDGAPYLRKVDLKLYKSYQELSEALSKMFSSFTVAKCGSQGVKDF 186
VKVSMDGAPYLRKVDLK+YKSYQ+LS+AL+KMFSSFT+ G+QG+ DF
Sbjct: 116 NFGGGAAGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQGMIDF 175
Query: 187 MNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWE 221
MNESKL++LLN S+YVP+YEDKDGDWMLVGDVPWE
Sbjct: 176 MNESKLMNLLNSSEYVPSYEDKDGDWMLVGDVPWE 210
>AT4G29080.1 | Symbols: PAP2, IAA27 | phytochrome-associated protein
2 | chr4:14323665-14325213 REVERSE LENGTH=305
Length = 305
Score = 193 bits (490), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 121/271 (44%), Positives = 145/271 (53%), Gaps = 41/271 (15%)
Query: 5 RDKYSMIHFEETELRLGLPLSGKEGDSTLKS---TLN--------GKRVFSD-------- 45
RD + ++F+ TELRLGLP G E + S LN KRVFSD
Sbjct: 32 RDNNNGLNFKATELRLGLP--GSESPERVDSRFLALNKSSCPVSGAKRVFSDAINDSNKW 89
Query: 46 -------TKTVDLKLNLXXXXX-----XXXXXXXXXXXXXXXRNPAKSPPAKAQVVGWPP 93
T T D+ ++ A +P +KAQVVGWPP
Sbjct: 90 VFSPGSTTATGDVGSGSGPRTSVVKDGKSTTFTKPAVPVKEKKSSATAPASKAQVVGWPP 149
Query: 94 VRSFRKNIVNVQKSNNINXXXXXXXXXXXXXXXXXXXXXXXXXFVKVSMDGAPYLRKVDL 153
+RSFRKN + +S +VKVSM+GAPYLRK+DL
Sbjct: 150 IRSFRKNSMASSQSQKPGNNSETEEAEAKSGPEQPCL------YVKVSMEGAPYLRKIDL 203
Query: 154 KLYKSYQELSEALSKMFSSFTVAKCGSQGV--KDFMNESKLIDLLNGSDYVPTYEDKDGD 211
K YKSY ELS AL KMFS FT+ + GS G +D +NES+L DLL GS+YV TYEDKD D
Sbjct: 204 KTYKSYLELSSALEKMFSCFTIGQFGSHGGCGRDGLNESRLTDLLRGSEYVVTYEDKDSD 263
Query: 212 WMLVGDVPWEMFVGSCKRLRIMKGSEAIGLG 242
WMLVGDVPWEMF+ SCK+LRIMK SEAIGL
Sbjct: 264 WMLVGDVPWEMFICSCKKLRIMKSSEAIGLA 294
>AT5G65670.1 | Symbols: IAA9 | indole-3-acetic acid inducible 9 |
chr5:26254463-26256134 FORWARD LENGTH=338
Length = 338
Score = 187 bits (476), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 93/161 (57%), Positives = 110/161 (68%), Gaps = 17/161 (10%)
Query: 84 AKAQVVGWPPVRSFRKNIVNVQKSNNINXXXXXXXXXXXXXXXXXXXXXXXXXFVKVSMD 143
AKAQ+VGWPPVRS+RKN + N+ FVKVSMD
Sbjct: 180 AKAQIVGWPPVRSYRKNTLATTCKNS---------------DEVDGRPGSGALFVKVSMD 224
Query: 144 GAPYLRKVDLKLYKSYQELSEALSKMFSSFTVAKCGSQGV--KDFMNESKLIDLLNGSDY 201
GAPYLRKVDL+ Y +Y ELS AL KMF++FT+ +CGS G KD ++E+KL DLLNG DY
Sbjct: 225 GAPYLRKVDLRSYTNYGELSSALEKMFTTFTLGQCGSNGAAGKDMLSETKLKDLLNGKDY 284
Query: 202 VPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSEAIGLG 242
V TYEDKDGDWMLVGDVPWEMF+ CK+L+IMKG +AIGL
Sbjct: 285 VLTYEDKDGDWMLVGDVPWEMFIDVCKKLKIMKGCDAIGLA 325
>AT5G65670.2 | Symbols: IAA9 | indole-3-acetic acid inducible 9 |
chr5:26254463-26256134 FORWARD LENGTH=336
Length = 336
Score = 187 bits (475), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 93/161 (57%), Positives = 110/161 (68%), Gaps = 17/161 (10%)
Query: 84 AKAQVVGWPPVRSFRKNIVNVQKSNNINXXXXXXXXXXXXXXXXXXXXXXXXXFVKVSMD 143
AKAQ+VGWPPVRS+RKN + N+ FVKVSMD
Sbjct: 180 AKAQIVGWPPVRSYRKNTLATTCKNS---------------DEVDGRPGSGALFVKVSMD 224
Query: 144 GAPYLRKVDLKLYKSYQELSEALSKMFSSFTVAKCGSQGV--KDFMNESKLIDLLNGSDY 201
GAPYLRKVDL+ Y +Y ELS AL KMF++FT+ +CGS G KD ++E+KL DLLNG DY
Sbjct: 225 GAPYLRKVDLRSYTNYGELSSALEKMFTTFTLGQCGSNGAAGKDMLSETKLKDLLNGKDY 284
Query: 202 VPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSEAIGLG 242
V TYEDKDGDWMLVGDVPWEMF+ CK+L+IMKG +AIGL
Sbjct: 285 VLTYEDKDGDWMLVGDVPWEMFIDVCKKLKIMKGCDAIGLA 325
>AT2G22670.2 | Symbols: IAA8 | indoleacetic acid-induced protein 8 |
chr2:9637136-9638459 FORWARD LENGTH=319
Length = 319
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 92/164 (56%), Positives = 114/164 (69%), Gaps = 16/164 (9%)
Query: 81 SPPAKAQVVGWPPVRSFRKNIVNVQKSNNINXXXXXXXXXXXXXXXXXXXXXXXXXFVKV 140
+P AKAQVVGWPP+RS+RKN + S N + FVKV
Sbjct: 159 APAAKAQVVGWPPIRSYRKNTMASSTSKNTDEVDGKPGLGVL--------------FVKV 204
Query: 141 SMDGAPYLRKVDLKLYKSYQELSEALSKMFSSFTVAKCGSQGV--KDFMNESKLIDLLNG 198
SMDGAPYLRKVDL+ Y SYQ+LS AL KMFS FT+ +CG G ++ M+E KL DLL+G
Sbjct: 205 SMDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHG 264
Query: 199 SDYVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSEAIGLG 242
S++V TYEDKDGDWMLVGDVPWE+F +C++L+IMKGS++IGLG
Sbjct: 265 SEFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSDSIGLG 308
>AT2G22670.4 | Symbols: IAA8 | indoleacetic acid-induced protein 8 |
chr2:9636877-9638459 FORWARD LENGTH=338
Length = 338
Score = 183 bits (465), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 91/164 (55%), Positives = 113/164 (68%), Gaps = 16/164 (9%)
Query: 81 SPPAKAQVVGWPPVRSFRKNIVNVQKSNNINXXXXXXXXXXXXXXXXXXXXXXXXXFVKV 140
+P AKAQVVGWPP+RS+RKN + S N + FVKV
Sbjct: 176 APAAKAQVVGWPPIRSYRKNTMASSTSKNTDEVDGKPGLGVL--------------FVKV 221
Query: 141 SMDGAPYLRKVDLKLYKSYQELSEALSKMFSSFTVAKCGSQGV--KDFMNESKLIDLLNG 198
SMDGAPYLRKVDL+ Y SYQ+LS AL KMFS FT+ +CG G ++ M+E KL DLL+G
Sbjct: 222 SMDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHG 281
Query: 199 SDYVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSEAIGLG 242
S++V TYEDKDGDWMLVGDVPWE+F +C++L+IMKGS++IGL
Sbjct: 282 SEFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSDSIGLA 325
>AT2G22670.3 | Symbols: IAA8 | indoleacetic acid-induced protein 8 |
chr2:9637136-9638459 FORWARD LENGTH=321
Length = 321
Score = 183 bits (465), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 91/163 (55%), Positives = 113/163 (69%), Gaps = 16/163 (9%)
Query: 81 SPPAKAQVVGWPPVRSFRKNIVNVQKSNNINXXXXXXXXXXXXXXXXXXXXXXXXXFVKV 140
+P AKAQVVGWPP+RS+RKN + S N + FVKV
Sbjct: 159 APAAKAQVVGWPPIRSYRKNTMASSTSKNTDEVDGKPGLGVL--------------FVKV 204
Query: 141 SMDGAPYLRKVDLKLYKSYQELSEALSKMFSSFTVAKCGSQGV--KDFMNESKLIDLLNG 198
SMDGAPYLRKVDL+ Y SYQ+LS AL KMFS FT+ +CG G ++ M+E KL DLL+G
Sbjct: 205 SMDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHG 264
Query: 199 SDYVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSEAIGL 241
S++V TYEDKDGDWMLVGDVPWE+F +C++L+IMKGS++IGL
Sbjct: 265 SEFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSDSIGL 307
>AT2G22670.1 | Symbols: IAA8 | indoleacetic acid-induced protein 8 |
chr2:9637136-9638459 FORWARD LENGTH=321
Length = 321
Score = 183 bits (465), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 91/163 (55%), Positives = 113/163 (69%), Gaps = 16/163 (9%)
Query: 81 SPPAKAQVVGWPPVRSFRKNIVNVQKSNNINXXXXXXXXXXXXXXXXXXXXXXXXXFVKV 140
+P AKAQVVGWPP+RS+RKN + S N + FVKV
Sbjct: 159 APAAKAQVVGWPPIRSYRKNTMASSTSKNTDEVDGKPGLGVL--------------FVKV 204
Query: 141 SMDGAPYLRKVDLKLYKSYQELSEALSKMFSSFTVAKCGSQGV--KDFMNESKLIDLLNG 198
SMDGAPYLRKVDL+ Y SYQ+LS AL KMFS FT+ +CG G ++ M+E KL DLL+G
Sbjct: 205 SMDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHG 264
Query: 199 SDYVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSEAIGL 241
S++V TYEDKDGDWMLVGDVPWE+F +C++L+IMKGS++IGL
Sbjct: 265 SEFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSDSIGL 307
>AT1G04240.1 | Symbols: SHY2, IAA3 | AUX/IAA transcriptional
regulator family protein | chr1:1128564-1129319 REVERSE
LENGTH=189
Length = 189
Score = 167 bits (423), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 104/238 (43%), Positives = 124/238 (52%), Gaps = 60/238 (25%)
Query: 10 MIHFEETELRLGLP-----LSGKEGDSTLKSTLNGKRVFSDTKTVDLKLNLXXXXXXXXX 64
++ +ETELRLGLP KE S + N KRV S +++
Sbjct: 4 FVNLKETELRLGLPGTDNVCEAKERVSCCNN--NNKRVLSTDTEKEIE------------ 49
Query: 65 XXXXXXXXXXXRNPAKSPPAKAQVVGWPPVRSFRKNIVNVQKSNNINXXXXXXXXXXXXX 124
R SPP KAQ+VGWPPVRS+RKN N+Q N
Sbjct: 50 --------SSSRKTETSPPRKAQIVGWPPVRSYRKN--NIQSKKN--------------- 84
Query: 125 XXXXXXXXXXXXFVKVSMDGAPYLRKVDLKLYKSYQELSEALSKMFSSFTVAKCGSQGVK 184
+VKVSMDGAPYLRK+DL YK Y EL +AL MF F+V + +
Sbjct: 85 ---ESEHEGQGIYVKVSMDGAPYLRKIDLSCYKGYSELLKALEVMFK-FSVGEYFER--- 137
Query: 185 DFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSEAIGLG 242
D GSD+VPTYEDKDGDWML+GDVPWEMF+ +CKRLRIMKGSEA GLG
Sbjct: 138 ---------DGYKGSDFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRIMKGSEAKGLG 186
>AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | AUX/IAA transcriptional
regulator family protein | chr5:17550465-17551206
FORWARD LENGTH=186
Length = 186
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/233 (42%), Positives = 125/233 (53%), Gaps = 60/233 (25%)
Query: 10 MIHFEETELRLGLPLSGKEGDSTLKSTLNGKRVFSDTKTVDLKLNLXXXXXXXXXXXXXX 69
+++ + TELRLGLP + + T+ + KRV + +++
Sbjct: 10 LVNLKATELRLGLPGT----EETVSCGKSNKRVLPEATEKEIE----------------- 48
Query: 70 XXXXXXRNPAKSPPAKAQVVGWPPVRSFRKNIVNVQKSNNINXXXXXXXXXXXXXXXXXX 129
+ SPP KAQ+VGWPPVRS+RKN V +KS +
Sbjct: 49 ---STGKTETASPP-KAQIVGWPPVRSYRKNNVQTKKSES-------------------- 84
Query: 130 XXXXXXXFVKVSMDGAPYLRKVDLKLYKSYQELSEALSKMFSSFTVAKCGSQGVKDFMNE 189
+VKVSMDGAPYLRK+DL +YK Y EL ++L MF F+V + F E
Sbjct: 85 --EGQGNYVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFK-FSVGEY-------FERE 134
Query: 190 SKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSEAIGLG 242
GSD+VPTYEDKDGDWMLVGDVPWEMFV SCKRLRIMKGSE GLG
Sbjct: 135 G-----YKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKGSEVKGLG 182
>AT3G23030.1 | Symbols: IAA2 | indole-3-acetic acid inducible 2 |
chr3:8181069-8181685 REVERSE LENGTH=174
Length = 174
Score = 151 bits (381), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/241 (39%), Positives = 124/241 (51%), Gaps = 79/241 (32%)
Query: 6 DKYSMIHFEETELRLGLP-----LSGKEGDSTLKSTLNGKRVFSDTKTVDLKLNLXXXXX 60
+K + ++ ++TEL LGLP + ++ S +KS N KR+F +T+ +
Sbjct: 4 EKVNELNLKDTELCLGLPGRTEKIKEEQEVSCVKS--NNKRLFEETRDEE---------- 51
Query: 61 XXXXXXXXXXXXXXXRNPAKSPPAKAQVVGWPPVRSFRKNIVNVQKSNNINXXXXXXXXX 120
+PP K Q+VGWPPVRS RKN +N+++
Sbjct: 52 ------------------ESTPPTKTQIVGWPPVRSSRKN------NNSVS--------- 78
Query: 121 XXXXXXXXXXXXXXXXFVKVSMDGAPYLRKVDLKLYKSYQELSEALSKMFSSFTVAKCGS 180
+VKVSMDGAPYLRK+DLK YK+Y EL +AL MF C
Sbjct: 79 ----------------YVKVSMDGAPYLRKIDLKTYKNYPELLKALENMFKVMIGEYCER 122
Query: 181 QGVKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSEAIG 240
+G K GS +VPTYEDKDGDWMLVGDVPW+MF SCKRLRIMKGS+A
Sbjct: 123 EGYK-------------GSGFVPTYEDKDGDWMLVGDVPWDMFSSSCKRLRIMKGSDAPA 169
Query: 241 L 241
L
Sbjct: 170 L 170
>AT4G14560.1 | Symbols: IAA1, AXR5 | indole-3-acetic acid inducible
| chr4:8361182-8361780 FORWARD LENGTH=168
Length = 168
Score = 131 bits (330), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/230 (41%), Positives = 117/230 (50%), Gaps = 74/230 (32%)
Query: 11 IHFEETELRLGLPLSGKEGDSTLKSTL-NGKRVFSDTKTVDLKLNLXXXXXXXXXXXXXX 69
++ ++TELRLGLP + +E L N KR +D+
Sbjct: 7 LNLKDTELRLGLPGAQEEQQLELSCVRSNNKRKNNDST---------------------- 44
Query: 70 XXXXXXRNPAKSPPAKAQVVGWPPVRSFRKNIVNVQKSNNINXXXXXXXXXXXXXXXXXX 129
+ PPAK Q+VGWPPVRS RKN N S
Sbjct: 45 -------EESAPPPAKTQIVGWPPVRSNRKNNNNKNVS---------------------- 75
Query: 130 XXXXXXXFVKVSMDGAPYLRKVDLKLYKSYQELSEALSKMFSSFTVAKCGS-QGVKDFMN 188
+VKVSMDGAPYLRK+DLK+YK+Y EL +AL MF FTV + +G K
Sbjct: 76 -------YVKVSMDGAPYLRKIDLKMYKNYPELLKALENMFK-FTVGEYSEREGYK---- 123
Query: 189 ESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSEA 238
GS +VPTYEDKDGDWMLVGDVPW+MF SC++LRIMKGSEA
Sbjct: 124 ---------GSGFVPTYEDKDGDWMLVGDVPWDMFSSSCQKLRIMKGSEA 164
>AT1G15580.1 | Symbols: IAA5, ATAUX2-27, AUX2-27 | indole-3-acetic
acid inducible 5 | chr1:5365764-5366460 REVERSE
LENGTH=163
Length = 163
Score = 130 bits (328), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 87/228 (38%), Positives = 110/228 (48%), Gaps = 78/228 (34%)
Query: 11 IHFEETELRLGLPLSGKEGDSTLK-STLNGKRVFSDTKTVDLKLNLXXXXXXXXXXXXXX 69
+ E TELRLGLP GD + +++GK+ S +DLK
Sbjct: 8 LGLEITELRLGLP-----GDIVVSGESISGKKRASPEVEIDLKCE--------------- 47
Query: 70 XXXXXXRNPAKSPPAKAQVVGWPPVRSFR-KNIVNVQKSNNINXXXXXXXXXXXXXXXXX 128
P K+QVVGWPPV S+R KN + KS+
Sbjct: 48 ------------PAKKSQVVGWPPVCSYRRKNSLERTKSS-------------------- 75
Query: 129 XXXXXXXXFVKVSMDGAPYLRKVDLKLYKSYQELSEALSKMFSSFTVAKCGSQGVKDFMN 188
+VKVS+DGA +LRK+DL++YK YQ+L+ AL +F +
Sbjct: 76 --------YVKVSVDGAAFLRKIDLEMYKCYQDLASALQILFGCYI-------------- 113
Query: 189 ESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGS 236
D L S+ VP YEDKDGDWML GDVPWEMF+GSCKRLRIMK S
Sbjct: 114 --NFDDTLKESECVPIYEDKDGDWMLAGDVPWEMFLGSCKRLRIMKRS 159
>AT3G16500.1 | Symbols: PAP1, IAA26 | phytochrome-associated protein
1 | chr3:5612801-5614208 REVERSE LENGTH=269
Length = 269
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 111/236 (47%), Gaps = 11/236 (4%)
Query: 4 ERDKYSMIHFEETELRLGLPLSGKEGDSTLKSTLNGKRVFSDTKTVDLKLNLXXXXXXXX 63
+ DK + ++ ELRLG P +E S +K R +T D +
Sbjct: 26 QEDKNNTDQEKKLELRLGPPGGDEEDHSAIKKKNTEIRNIK-KETEDKSFHCFNGNHFSP 84
Query: 64 XXXXXXXXXXXXRNPAKSPPAKAQVVGWPPVRSFRKNIVNVQKSNNINXXXXXXXXXXXX 123
+ A P VVGWPPVRSFRKN+ + S N
Sbjct: 85 SNKTTSVPHISQKRTAPGP-----VVGWPPVRSFRKNLASTSSSKLGNESSHGGQINKSD 139
Query: 124 XXXXXXXXXXXXXFVKVSMDGAPYLRKVDLKLYKSYQELSEALSKMFSSFTVAKCGSQGV 183
FVK++MDG P RKVDL Y SY++LS + K+F A+ + +
Sbjct: 140 DGEKQVETKKEGMFVKINMDGVPIGRKVDLNAYNSYEQLSFVVDKLFRGLLAAQ---RDI 196
Query: 184 KDFMNESK-LIDLLNG-SDYVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSE 237
D E K +I LL+G ++ TYED +GD MLVGDVPW+MFV S KRLR++K SE
Sbjct: 197 SDGQGEEKPIIGLLDGKGEFTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKSSE 252
>AT4G28640.3 | Symbols: IAA11 | indole-3-acetic acid inducible 11 |
chr4:14142288-14143677 FORWARD LENGTH=250
Length = 250
Score = 121 bits (304), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 89/159 (55%), Gaps = 5/159 (3%)
Query: 86 AQVVGWPPVRSFRKNIVNVQKSNNINXXXXXXXXXXXXXXXXXXXXXXXXXFVKVSMDGA 145
QVVGWPP+R++R N + Q + FVKV+MDG
Sbjct: 87 GQVVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNRSDSTKMRNSMFVKVTMDGI 146
Query: 146 PYLRKVDLKLYKSYQELSEALSKMFSSFTVAKCGSQGVK-DFMNESKLIDLLNGSD-YVP 203
P RK+DL +K Y+ LS L +MF K GS+ ++ D E+ + L +GS V
Sbjct: 147 PIGRKIDLNAHKCYESLSNTLEEMFLK---PKLGSRTLETDGHMETPVKILPDGSSGLVL 203
Query: 204 TYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSEAIGLG 242
TYEDK+GDWMLVGDVPW MF+GS +RLRIMK SEA G G
Sbjct: 204 TYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSEATGKG 242
>AT3G15540.1 | Symbols: IAA19, MSG2 | indole-3-acetic acid inducible
19 | chr3:5264100-5265378 FORWARD LENGTH=197
Length = 197
Score = 121 bits (303), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 108/232 (46%), Gaps = 48/232 (20%)
Query: 11 IHFEETELRLGLPLSGKEGDSTLKSTLNGKRVFSDTKTVDLKLNLXXXXXXXXXXXXXXX 70
+ E TELRLGLP G++ + + KR F++ N
Sbjct: 6 LGLEITELRLGLP--GRD----VAEKMMKKRAFTEMNMTSSGSN------SDQCESGVVS 53
Query: 71 XXXXXRNPAKSPPAKAQVVGWPPVRSFRKNIVNVQKSNNINXXXXXXXXXXXXXXXXXXX 130
SP AK+QVVGWPPV S+RK + S
Sbjct: 54 SGGDAEKVNDSPAAKSQVVGWPPVCSYRKKNSCKEASTT--------------------- 92
Query: 131 XXXXXXFVKVSMDGAPYLRKVDLKLYKSYQELSEALSKMFSSFTVAKCGSQGVKDFMNES 190
+VKVSMDG PYLRK+DL + Y +L+ AL K+F G +G+ + +
Sbjct: 93 -KVGLGYVKVSMDGVPYLRKMDLGSSQGYDDLAFALDKLF--------GFRGIGVALKDG 143
Query: 191 KLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSEAIGLG 242
+ +YV YEDKDGDWML GDVPW MF+ SCKRLRIMK S+A G G
Sbjct: 144 ------DNCEYVTIYEDKDGDWMLAGDVPWGMFLESCKRLRIMKRSDATGFG 189
>AT4G28640.1 | Symbols: IAA11 | indole-3-acetic acid inducible 11 |
chr4:14142288-14143755 FORWARD LENGTH=246
Length = 246
Score = 120 bits (301), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/157 (43%), Positives = 88/157 (56%), Gaps = 5/157 (3%)
Query: 86 AQVVGWPPVRSFRKNIVNVQKSNNINXXXXXXXXXXXXXXXXXXXXXXXXXFVKVSMDGA 145
QVVGWPP+R++R N + Q + FVKV+MDG
Sbjct: 87 GQVVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNRSDSTKMRNSMFVKVTMDGI 146
Query: 146 PYLRKVDLKLYKSYQELSEALSKMFSSFTVAKCGSQGVK-DFMNESKLIDLLNGSD-YVP 203
P RK+DL +K Y+ LS L +MF K GS+ ++ D E+ + L +GS V
Sbjct: 147 PIGRKIDLNAHKCYESLSNTLEEMFLK---PKLGSRTLETDGHMETPVKILPDGSSGLVL 203
Query: 204 TYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSEAIG 240
TYEDK+GDWMLVGDVPW MF+GS +RLRIMK SEA G
Sbjct: 204 TYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSEATG 240
>AT4G28640.2 | Symbols: IAA11 | indole-3-acetic acid inducible 11 |
chr4:14142288-14143928 FORWARD LENGTH=302
Length = 302
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 89/167 (53%), Gaps = 5/167 (2%)
Query: 76 RNPAKSPPAKAQVVGWPPVRSFRKNIVNVQKSNNINXXXXXXXXXXXXXXXXXXXXXXXX 135
R QVVGWPP+R++R N + Q +
Sbjct: 77 RTADSMAATSGQVVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNRSDSTKMRNS 136
Query: 136 XFVKVSMDGAPYLRKVDLKLYKSYQELSEALSKMFSSFTVAKCGSQGVK-DFMNESKLID 194
FVKV+MDG P RK+DL +K Y+ LS L +MF K GS+ ++ D E+ +
Sbjct: 137 MFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLK---PKLGSRTLETDGHMETPVKI 193
Query: 195 LLNGSD-YVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSEAIG 240
L +GS V TYEDK+GDWMLVGDVPW MF+GS +RLRIMK SEA G
Sbjct: 194 LPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSEATG 240
>AT2G33310.3 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=246
Length = 246
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 87/167 (52%), Gaps = 9/167 (5%)
Query: 81 SPPAKAQVVGWPPVRSFRKN-IVNVQKSNNINXXXXXXXXXXX----XXXXXXXXXXXXX 135
SPP +QVVGWPP+ S R N +VN Q + +
Sbjct: 69 SPPRSSQVVGWPPIGSHRMNSLVNNQATKSAREEEEAGKKKVKDDEPKDVTKKVNGKVQV 128
Query: 136 XFVKVSMDGAPYLRKVDLKLYKSYQELSEALSKMFSSFTVAKCGSQGVKDFMNESKLIDL 195
F+KV+MDG RKVDL + SY+ L++ L MF G F +L+D
Sbjct: 129 GFIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGL--TSQFTKPLRLLD- 185
Query: 196 LNGSDYVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSEAIGLG 242
S++V TYEDK+GDWMLVGDVPW MF+ S KRLR+MK SEA GL
Sbjct: 186 -GSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLA 231
>AT2G33310.1 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=246
Length = 246
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 87/167 (52%), Gaps = 9/167 (5%)
Query: 81 SPPAKAQVVGWPPVRSFRKN-IVNVQKSNNINXXXXXXXXXXX----XXXXXXXXXXXXX 135
SPP +QVVGWPP+ S R N +VN Q + +
Sbjct: 69 SPPRSSQVVGWPPIGSHRMNSLVNNQATKSAREEEEAGKKKVKDDEPKDVTKKVNGKVQV 128
Query: 136 XFVKVSMDGAPYLRKVDLKLYKSYQELSEALSKMFSSFTVAKCGSQGVKDFMNESKLIDL 195
F+KV+MDG RKVDL + SY+ L++ L MF G F +L+D
Sbjct: 129 GFIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGL--TSQFTKPLRLLD- 185
Query: 196 LNGSDYVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSEAIGLG 242
S++V TYEDK+GDWMLVGDVPW MF+ S KRLR+MK SEA GL
Sbjct: 186 -GSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLA 231
>AT1G52830.1 | Symbols: IAA6, SHY1 | indole-3-acetic acid 6 |
chr1:19672670-19673559 REVERSE LENGTH=189
Length = 189
Score = 117 bits (293), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 98/232 (42%), Gaps = 52/232 (22%)
Query: 11 IHFEETELRLGLPLSGKEGDSTLKSTLNGKRVFSDTKTVDLKLNLXXXXXXXXXXXXXXX 70
+ E TELRLGLP S S+ KRV SD T
Sbjct: 6 LALEITELRLGLPGDNYSEISVCGSSKKKKRVLSDMMT------------SSALDTENEN 53
Query: 71 XXXXXRNPAKSPPAKAQVVGWPPVRSFRKNIVNVQKSNNINXXXXXXXXXXXXXXXXXXX 130
P K+Q VGWPPV S+R+ N + S I
Sbjct: 54 SVVSSVEDESLPVVKSQAVGWPPVCSYRRKKNNEEASKAIG------------------- 94
Query: 131 XXXXXXFVKVSMDGAPYLRKVDLKLYKSYQELSEALSKMFSSFTVAKCGSQGVKDFMNES 190
+VKVSMDG PY+RK+DL SY L L +F + +G K
Sbjct: 95 ------YVKVSMDGVPYMRKIDLGSSNSYINLVTVLENLFGCLGIG-VAKEGKK------ 141
Query: 191 KLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSEAIGLG 242
+Y+ YEDKD DWMLVGDVPW+MF SCKRLRI+K S+A G G
Sbjct: 142 --------CEYIIIYEDKDRDWMLVGDVPWQMFKESCKRLRIVKRSDATGFG 185
>AT1G04550.2 | Symbols: IAA12, BDL | AUX/IAA transcriptional
regulator family protein | chr1:1240582-1241810 FORWARD
LENGTH=239
Length = 239
Score = 117 bits (292), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 71/169 (42%), Positives = 88/169 (52%), Gaps = 16/169 (9%)
Query: 81 SPPAKAQVVGWPPVRSFRKN-IVNVQKSNNINXXXXXXXXXXXXX------XXXXXXXXX 133
SPP +QVVGWPP+ R N +VN Q
Sbjct: 63 SPPRSSQVVGWPPIGLHRMNSLVNNQAMKAARAEEGDGEKKVVKNDELKDVSMKVNPKVQ 122
Query: 134 XXXFVKVSMDGAPYLRKVDLKLYKSYQELSEALSKMFSSFTVAKCGSQGVKDFMNESKLI 193
FVKV+MDG RKVD++ + SY+ L++ L +MF T C + K +
Sbjct: 123 GLGFVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTC--------REKVKPL 174
Query: 194 DLLNGS-DYVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSEAIGL 241
LL+GS D+V TYEDK+GDWMLVGDVPW MF+ S KRLRIM SEA GL
Sbjct: 175 RLLDGSSDFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRIMGTSEASGL 223
>AT2G33310.2 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=247
Length = 247
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 88/168 (52%), Gaps = 10/168 (5%)
Query: 81 SPP-AKAQVVGWPPVRSFRKN-IVNVQKSNNINXXXXXXXXXXX----XXXXXXXXXXXX 134
SPP + +QVVGWPP+ S R N +VN Q + +
Sbjct: 69 SPPRSSSQVVGWPPIGSHRMNSLVNNQATKSAREEEEAGKKKVKDDEPKDVTKKVNGKVQ 128
Query: 135 XXFVKVSMDGAPYLRKVDLKLYKSYQELSEALSKMFSSFTVAKCGSQGVKDFMNESKLID 194
F+KV+MDG RKVDL + SY+ L++ L MF G F +L+D
Sbjct: 129 VGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGL--TSQFTKPLRLLD 186
Query: 195 LLNGSDYVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSEAIGLG 242
S++V TYEDK+GDWMLVGDVPW MF+ S KRLR+MK SEA GL
Sbjct: 187 --GSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLA 232
>AT1G80390.1 | Symbols: IAA15 | indole-3-acetic acid inducible 15 |
chr1:30221780-30222702 REVERSE LENGTH=179
Length = 179
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/226 (35%), Positives = 101/226 (44%), Gaps = 65/226 (28%)
Query: 16 TELRLGLPLSGKEGDSTLKSTLNGKRVFSDTKTVDLKLNLXXXXXXXXXXXXXXXXXXXX 75
TEL L LP + K N +R +TVDLKL
Sbjct: 19 TELTLALPGTPTNASEGPKKFGNKRRFL---ETVDLKLG-----------------EAHE 58
Query: 76 RNPAKSPPAKAQVVGWPPVRSFRKNIVNVQKSNNINXXXXXXXXXXXXXXXXXXXXXXXX 135
N S Q+VGWPPV + RK +
Sbjct: 59 NNYISSMVTNDQLVGWPPVATARKTV--------------------------------RR 86
Query: 136 XFVKVSMDGAPYLRKVDLKLYKSYQELSEALSKMFSSFTVAKCGSQGVKDFMNESKLIDL 195
+VKV++DGA YLRKVDL +Y Y +L AL MF QG+ + ++ +L
Sbjct: 87 KYVKVALDGAAYLRKVDLGMYDCYGQLFTALENMF----------QGI---ITICRVTEL 133
Query: 196 LNGSDYVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSEAIGL 241
++V TYEDKDGD MLVGDVPW MFV SCKR+R+MK +AIGL
Sbjct: 134 ERKGEFVATYEDKDGDLMLVGDVPWMMFVESCKRMRLMKTGDAIGL 179
>AT1G04100.1 | Symbols: IAA10 | indoleacetic acid-induced protein 10
| chr1:1059809-1061026 FORWARD LENGTH=261
Length = 261
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 86/167 (51%), Gaps = 14/167 (8%)
Query: 89 VGWPPVRSFRKN-IVNVQKSNNINXXXXXXXXXXXXXXXXXXXXXXXXXF---------V 138
VGWPP+R++R N +VN KS F V
Sbjct: 95 VGWPPLRTYRINSLVNQAKSLATEGGLSSGIQKETTKSVVVAAKNDDACFIKSSRTSMLV 154
Query: 139 KVSMDGAPYLRKVDLKLYKSYQELSEALSKMFSSF--TVAKCGSQGVKDFMNESKLIDLL 196
KV+MDG RKVDL SY L + L MF V + +QG K + E+ LL
Sbjct: 155 KVTMDGVIIGRKVDLNALDSYAALEKTLDLMFFQIPSPVTRSNTQGYKT-IKETCTSKLL 213
Query: 197 NG-SDYVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSEAIGLG 242
+G S+Y+ TY+DKDGDWMLVGDVPW+MF+GS RLRIMK S G+G
Sbjct: 214 DGSSEYIITYQDKDGDWMLVGDVPWQMFLGSVTRLRIMKTSIGAGVG 260
>AT1G51950.1 | Symbols: IAA18 | indole-3-acetic acid inducible 18 |
chr1:19305670-19307130 FORWARD LENGTH=267
Length = 267
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 87/164 (53%), Gaps = 16/164 (9%)
Query: 84 AKAQVVGWPPVRSFRKNIVNVQKS-----NNINXXXXXXXXXXXXXXXXXXXXXXXXXFV 138
A VVGWPPVRSFRKN+ + S + + FV
Sbjct: 93 APGPVVGWPPVRSFRKNLASGSSSKLGNDSTTSNGVTLKNQKCDAAAKTTEPKRQGGMFV 152
Query: 139 KVSMDGAPYLRKVDLKLYKSYQELSEALSKMFSSFTVAKCGSQGVKDF----MNESKLID 194
K++M G P RKVDL + SY++LS + K+F A+ +DF +E +
Sbjct: 153 KINMYGVPIGRKVDLSAHNSYEQLSFTVDKLFRGLLAAQ------RDFPSSIEDEKPITG 206
Query: 195 LLNGS-DYVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSE 237
LL+G+ +Y TYED +GD MLVGDVPW+MFV S KRLR++K SE
Sbjct: 207 LLDGNGEYTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKTSE 250
>AT5G25890.1 | Symbols: IAA28, IAR2 | indole-3-acetic acid inducible
28 | chr5:9033480-9034554 FORWARD LENGTH=175
Length = 175
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 75/157 (47%), Gaps = 35/157 (22%)
Query: 86 AQVVGWPPVRSFRKNIVNVQKSNNINXXXXXXXXXXXXXXXXXXXXXXXXXFVKVSMDGA 145
A VVGWPPVRS R+N+ +VK++M+G
Sbjct: 47 APVVGWPPVRSSRRNLT----------------AQLKEEMKKKESDEEKELYVKINMEGV 90
Query: 146 PYLRKVDLKLYKSYQELSEALSKMFSSFTVAKCGSQGVKDFMNESKLIDLLNGSDYVPTY 205
P RKV+L Y +YQ+LS A+ ++FS KD + ++ Y Y
Sbjct: 91 PIGRKVNLSAYNNYQQLSHAVDQLFSK-----------KDSWDLNR--------QYTLVY 131
Query: 206 EDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSEAIGLG 242
ED +GD +LVGDVPWEMFV + KRL ++K S A L
Sbjct: 132 EDTEGDKVLVGDVPWEMFVSTVKRLHVLKTSHAFSLS 168
>AT3G17600.1 | Symbols: IAA31 | indole-3-acetic acid inducible 31 |
chr3:6020281-6021040 REVERSE LENGTH=158
Length = 158
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 60/98 (61%), Gaps = 17/98 (17%)
Query: 137 FVKVSMDGAPYLRKVDLKLYKSYQELSEALSKMFSSFTVAKCGSQGVKDFMNESKLIDLL 196
FVKV M+G P RK+DL ++ Y+ L E LS MF + + CG++ K
Sbjct: 74 FVKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSII--CGNRDRKH----------- 120
Query: 197 NGSDYVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMK 234
+V TYEDKDGDWM+VGD+PW+MF+ + +RL+I +
Sbjct: 121 ----HVLTYEDKDGDWMMVGDIPWDMFLETVRRLKITR 154
>AT2G46990.1 | Symbols: IAA20 | indole-3-acetic acid inducible 20 |
chr2:19307861-19308869 FORWARD LENGTH=175
Length = 175
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 59/100 (59%), Gaps = 13/100 (13%)
Query: 137 FVKVSMDGAPYLRKVDLKLYKSYQELSEALSKMFSSFTVAKCGSQGVKDFMNESKLIDLL 196
+VKV+M+G P RK+DL Y++L L MF++ + ++ D+
Sbjct: 86 YVKVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILW-------------AEEEDMC 132
Query: 197 NGSDYVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGS 236
N +V TY DK+GDWM+VGDVPWEMF+ + +RL+I + +
Sbjct: 133 NEKSHVLTYADKEGDWMMVGDVPWEMFLSTVRRLKISRAN 172
>AT3G62100.1 | Symbols: IAA30 | indole-3-acetic acid inducible 30 |
chr3:22995835-22996593 FORWARD LENGTH=172
Length = 172
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 57/98 (58%), Gaps = 13/98 (13%)
Query: 137 FVKVSMDGAPYLRKVDLKLYKSYQELSEALSKMFSSFTVAKCGSQGVKDFMNESKLIDLL 196
+VKV+M+G P RK+DL Y +L L MF++ + ++ D+
Sbjct: 84 YVKVNMEGVPIGRKIDLLSLNGYHDLITTLDYMFNASILW-------------AEEEDMC 130
Query: 197 NGSDYVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMK 234
+ +V TY DK+GDWM+VGDVPWEMF+ S +RL+I +
Sbjct: 131 SEKSHVLTYADKEGDWMMVGDVPWEMFLSSVRRLKISR 168
>AT4G32280.1 | Symbols: IAA29 | indole-3-acetic acid inducible 29 |
chr4:15583479-15584628 FORWARD LENGTH=251
Length = 251
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 18/98 (18%)
Query: 137 FVKVSMDGAPYLRKVDLKLYKSYQELSEALSKMFSSFTVAKCGSQGVKDFMNESKLIDLL 196
+VKV MDG RKVD+KL+ SY+ L+ +L MF+ + C +
Sbjct: 161 YVKVKMDGVAIARKVDIKLFNSYESLTNSLITMFTEY--EDCDRE--------------- 203
Query: 197 NGSDYVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMK 234
++Y T++ K+GDW+L GDV W++F S R+ I++
Sbjct: 204 -DTNYTFTFQGKEGDWLLRGDVTWKIFAESVHRISIIR 240
>AT1G15050.1 | Symbols: IAA34 | indole-3-acetic acid inducible 34 |
chr1:5182256-5183243 REVERSE LENGTH=185
Length = 185
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 14/103 (13%)
Query: 137 FVKVSMDGAPYLRKVDLKLYKSYQELSEALSKMFSSFTVAKCGSQGVKDFMNESKLIDLL 196
+VKV+MDG RKV + + SY L+ L MF +V+ G++ F ES
Sbjct: 94 YVKVTMDGLVVGRKVCVLDHGSYSTLAHQLEDMFGMQSVS-----GLRLFQMES------ 142
Query: 197 NGSDYVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSEAI 239
++ Y D++G W GDVPW F+ S +RLRI + ++A+
Sbjct: 143 ---EFCLVYRDEEGLWRNAGDVPWNEFIESVERLRITRRNDAV 182
>AT2G01200.2 | Symbols: IAA32 | indole-3-acetic acid inducible 32 |
chr2:118385-119219 FORWARD LENGTH=191
Length = 191
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 14/103 (13%)
Query: 137 FVKVSMDGAPYLRKVDLKLYKSYQELSEALSKMFSSFTVAKCGSQGVKDFMNESKLIDLL 196
+VKV++DG RKV L +Y L+ L+ MF TV+ G++ F ES
Sbjct: 100 YVKVNLDGLVVGRKVCLVDQGAYATLALQLNDMFGMQTVS-----GLRLFQTES------ 148
Query: 197 NGSDYVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSEAI 239
++ Y D++G W VGDVPW+ FV S R+RI + ++A+
Sbjct: 149 ---EFSLVYRDREGIWRNVGDVPWKEFVESVDRMRIARRNDAL 188
>AT3G61830.1 | Symbols: ARF18 | auxin response factor 18 |
chr3:22888171-22891179 FORWARD LENGTH=602
Length = 602
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 42/100 (42%), Gaps = 19/100 (19%)
Query: 138 VKVSMDGAPYLRKVDLKLYKSYQELSEALSKMFSSFTVAKCGSQGVKDFMNESKLIDLLN 197
KV M G R VDL L KSY EL + L +MF QG LL
Sbjct: 492 TKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEI--------QG-----------QLLA 532
Query: 198 GSDYVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSE 237
++ + D +GD ML GD PW F K++ I E
Sbjct: 533 RDKWIVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDE 572
>AT2G46530.3 | Symbols: ARF11 | auxin response factor 11 |
chr2:19105112-19108029 FORWARD LENGTH=622
Length = 622
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 42/101 (41%), Gaps = 19/101 (18%)
Query: 138 VKVSMDGAPYLRKVDLKLYKSYQELSEALSKMFSSFTVAKCGSQGVKDFMNESKLIDLLN 197
+KV M G R VDL L +SY EL + L KMF G KD
Sbjct: 514 IKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIE-----GELSPKD------------ 556
Query: 198 GSDYVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSEA 238
+ + D +GD MLVGD PW F K+L I E
Sbjct: 557 --KWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEV 595
>AT2G46530.2 | Symbols: ARF11 | auxin response factor 11 |
chr2:19105511-19108029 FORWARD LENGTH=514
Length = 514
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 42/100 (42%), Gaps = 19/100 (19%)
Query: 138 VKVSMDGAPYLRKVDLKLYKSYQELSEALSKMFSSFTVAKCGSQGVKDFMNESKLIDLLN 197
+KV M G R VDL L +SY EL + L KMF G KD
Sbjct: 406 IKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEI-----EGELSPKD------------ 448
Query: 198 GSDYVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSE 237
+ + D +GD MLVGD PW F K+L I E
Sbjct: 449 --KWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDE 486
>AT2G46530.1 | Symbols: ARF11 | auxin response factor 11 |
chr2:19104993-19108029 FORWARD LENGTH=601
Length = 601
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 42/100 (42%), Gaps = 19/100 (19%)
Query: 138 VKVSMDGAPYLRKVDLKLYKSYQELSEALSKMFSSFTVAKCGSQGVKDFMNESKLIDLLN 197
+KV M G R VDL L +SY EL + L KMF G KD
Sbjct: 493 IKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIE-----GELSPKD------------ 535
Query: 198 GSDYVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSE 237
+ + D +GD MLVGD PW F K+L I E
Sbjct: 536 --KWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDE 573
>AT5G57420.1 | Symbols: IAA33 | indole-3-acetic acid inducible 33 |
chr5:23270024-23270959 FORWARD LENGTH=171
Length = 171
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 14/93 (15%)
Query: 142 MDGAPYLRKVDLKLYKSYQELSEALSKMFSSFTVAKCGSQGVKDFMNESKLIDLLNG-SD 200
++G +++ L + SYQ L+ AL +MF G+ D +DL N
Sbjct: 79 LEGRSICQRISLDKHGSYQSLASALRQMFVD------GADSTDD-------LDLSNAIPG 125
Query: 201 YVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIM 233
++ YED + D +L GD+ W+ FV KR+RI+
Sbjct: 126 HLIAYEDMENDLLLAGDLTWKDFVRVAKRIRIL 158
>AT4G23980.2 | Symbols: ARF9 | auxin response factor 9 |
chr4:12451592-12454737 FORWARD LENGTH=636
Length = 636
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 42/100 (42%), Gaps = 19/100 (19%)
Query: 138 VKVSMDGAPYLRKVDLKLYKSYQELSEALSKMFSSFTVAKCGSQGVKDFMNESKLIDLLN 197
KV M G P R VDL K Y EL + + K+F D E L +
Sbjct: 524 TKVQMQGVPVGRAVDLNALKGYNELIDDIEKLF--------------DIKGE-----LRS 564
Query: 198 GSDYVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSE 237
+ + + D +GD MLVGD PW F KR+ I E
Sbjct: 565 RNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEE 604
>AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 |
chr4:12451592-12454737 FORWARD LENGTH=638
Length = 638
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 42/101 (41%), Gaps = 19/101 (18%)
Query: 138 VKVSMDGAPYLRKVDLKLYKSYQELSEALSKMFSSFTVAKCGSQGVKDFMNESKLIDLLN 197
KV M G P R VDL K Y EL + + K+F D E L +
Sbjct: 526 TKVQMQGVPVGRAVDLNALKGYNELIDDIEKLF--------------DIKGE-----LRS 566
Query: 198 GSDYVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSEA 238
+ + + D +GD MLVGD PW F KR+ I E
Sbjct: 567 RNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEV 607