Miyakogusa Predicted Gene

Lj1g3v4959930.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4959930.1 Non Chatacterized Hit- tr|D7U5C7|D7U5C7_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,28,0.000000000004,EF_HAND_2,EF-HAND 2; no description,EF-hand-like
domain; seg,NULL,CUFF.33755.1
         (326 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G28830.1 | Symbols:  | calcium-binding EF hand family protein...   251   6e-67
AT4G38810.2 | Symbols:  | Calcium-binding EF-hand family protein...    49   4e-06

>AT5G28830.1 | Symbols:  | calcium-binding EF hand family protein |
           chr5:10856801-10858394 FORWARD LENGTH=324
          Length = 324

 Score =  251 bits (640), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 149/325 (45%), Positives = 200/325 (61%), Gaps = 9/325 (2%)

Query: 1   MSDGA-LQILDGTHLRNXXXXX-XXXXXXXGAHILDIAHSRVSASLFALPLSDALKASAL 58
           MS+ A L I DG  LR+             GA +L+I+ S+VS SL  L L   LK +A+
Sbjct: 1   MSNTAGLTIFDGDLLRSIDLNLPEHQHRVTGAQLLEISESKVSQSLSGLSLPPHLKETAI 60

Query: 59  TRLHLPDADAFLSAEYDHDKAAEVLRDYIAAIADELKDNPIVASILDGSTISLLLEDEDD 118
           +++   D   F    ++  +A+E L  + + +AD LKD PIV SILDG+ + + LEDEDD
Sbjct: 61  SQVSDGDHVTFRRTMFNKQQASEKLGVFFSTVADALKDTPIVVSILDGTMLKMFLEDEDD 120

Query: 119 FAMLAENLFTDLDVKDKGKISKSEIRNALVQMGAEMGVPPFSEFPLLNDILKKHGADGEE 178
           FAMLAENLFTDLD +DKGK+ KSEIR ALV MG EMGVPP SEFP+L+DI+KKH AD +E
Sbjct: 121 FAMLAENLFTDLDEEDKGKLCKSEIRKALVHMGVEMGVPPLSEFPILDDIIKKHDADSDE 180

Query: 179 ELGQAQFAQLLQSVLQDLEPELSKKXXXXXXXXXXXXGSKLRQLLANEPELNSIVERALQ 238
           ELGQAQFA+LLQ VLQ++   L +K            GS++R++LA+E  L  +VE+ + 
Sbjct: 181 ELGQAQFAELLQQVLQEIADVLHEKPITIVLNVEIFTGSRIRKILADEKTLKCLVEKTIL 240

Query: 239 EKPEPADGLGSTETIIRGFLEKNAKELGL-PLSEADSAVALLYDTVFADVVXXXXXXXXX 297
           E+    +  G   T+I     KN KELGL PLS  +  VALLY+T+ + +          
Sbjct: 241 EESNGKESQGWLRTLII----KNGKELGLPPLSSENEQVALLYETIISQLNNKENASTKE 296

Query: 298 XXXXAKLMKDVLEKFAEQLEFNPVY 322
               A  +KD+L+KF E LE  PV+
Sbjct: 297 EFMDA--LKDILKKFEELLETTPVF 319


>AT4G38810.2 | Symbols:  | Calcium-binding EF-hand family protein |
           chr4:18115607-18118860 REVERSE LENGTH=375
          Length = 375

 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 53/95 (55%), Gaps = 4/95 (4%)

Query: 103 ILDGSTISLLLEDEDDFAMLAENLFTDLDVKDKGKISKSEIRNALVQMGAEMGVPPFSEF 162
           +LDGS I  L+E+E  F    E  F  LD  + GK+S +E++ A+  +GA +G+P     
Sbjct: 14  VLDGSDIVELVENEKVFDKFVEQKFQQLDQDEDGKLSVTELQPAVADIGAALGLPAQGTS 73

Query: 163 P----LLNDILKKHGADGEEELGQAQFAQLLQSVL 193
           P    + +++L +     +E++ + +F ++L  +L
Sbjct: 74  PDSDHIYSEVLNEFTHGSQEKVSKTEFKEVLSDIL 108