Miyakogusa Predicted Gene

Lj1g3v4957740.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4957740.1 Non Chatacterized Hit- tr|I1M5L3|I1M5L3_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,56.45,0.0000000003,DUF630,Domain of unknown function DUF630;
seg,NULL,CUFF.33739.1
         (148 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G02110.1 | Symbols:  | Protein of unknown function (DUF630 an...    56   8e-09
AT5G25590.1 | Symbols:  | Protein of unknown function (DUF630 an...    49   1e-06

>AT1G02110.1 | Symbols:  | Protein of unknown function (DUF630 and
          DUF632) | chr1:392939-395434 FORWARD LENGTH=703
          Length = 703

 Score = 56.2 bits (134), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 6/71 (8%)

Query: 1  MGCSQTKIMCYTRSTKTEKVQRSKKRQQFMKDAVLAVNKFAAAHSSYANCLVKTGSALTD 60
          MGC+ +K+         + V+R K+R++ MKDAV A +  AAAHS Y   L  TGSAL+ 
Sbjct: 1  MGCTASKL------DSEDAVRRCKERRRLMKDAVYARHHLAAAHSDYCRSLRLTGSALSS 54

Query: 61 FAAQFPTTFME 71
          FAA  P +  E
Sbjct: 55 FAAGEPLSVSE 65


>AT5G25590.1 | Symbols:  | Protein of unknown function (DUF630 and
          DUF632) | chr5:8906684-8909847 REVERSE LENGTH=775
          Length = 775

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 6/62 (9%)

Query: 1  MGCSQTKIMCYTRSTKTEKVQRSKKRQQFMKDAVLAVNKFAAAHSSYANCLVKTGSALTD 60
          MGC+Q+++         E V R K+R+  +K+AV A   FAA H +YA  L  TG+AL+D
Sbjct: 1  MGCAQSRV------DNEEAVARCKERRNVIKEAVSASKAFAAGHFAYAIALKNTGAALSD 54

Query: 61 FA 62
          + 
Sbjct: 55 YG 56