Miyakogusa Predicted Gene

Lj1g3v4957730.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4957730.1 Non Chatacterized Hit- tr|G7L0U7|G7L0U7_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,74.54,0,seg,NULL; DUF1517,Protein of unknown function
DUF1517,CUFF.33741.1
         (360 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G54520.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   329   2e-90

>AT1G54520.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: chloroplast;
           EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
           growth stages; CONTAINS InterPro DOMAIN/s: Protein of
           unknown function DUF1517 (InterPro:IPR010903); Has 276
           Blast hits to 275 proteins in 83 species: Archae - 0;
           Bacteria - 108; Metazoa - 6; Fungi - 0; Plants - 113;
           Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).
           | chr1:20363565-20365874 FORWARD LENGTH=391
          Length = 391

 Score =  329 bits (843), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 171/238 (71%), Positives = 200/238 (84%), Gaps = 6/238 (2%)

Query: 128 VPNPS-PGFSYSA---PYYGPSPFSGGFYMXXXXXXXXXXXSSFFLILVGFAAFILVSGF 183
           VP  S P FSYSA   PYYGPSPF GGF +           SSF LILVGFAAF+LVSGF
Sbjct: 134 VPRTSNPSFSYSARTAPYYGPSPFGGGF-VGPAVGFGFGGFSSFSLILVGFAAFVLVSGF 192

Query: 184 LSDRSEG-SVLTAAEKTTVLKLQVGLLGMGRSLQKDLNRIAQVADTSSPEGLNYVLTETT 242
           LSDRS+  S+LT  +KT+V+KLQVGLLG+GR+LQ+D NR+A+ +DTS+PEGL+YVLTE T
Sbjct: 193 LSDRSQDDSILTDTQKTSVIKLQVGLLGLGRTLQQDFNRLAESSDTSTPEGLSYVLTEAT 252

Query: 243 LALLRHPDYCISAYSSVDVKRSIEDGEKRFNQLSIEERGKFDEETLVNVNNIKRQSTRSQ 302
           LALLRHPDYCIS YSSVDVK SIE GEKRFNQLSIEERGKFDEETLVNVN+IKRQS++ +
Sbjct: 253 LALLRHPDYCISCYSSVDVKPSIEKGEKRFNQLSIEERGKFDEETLVNVNSIKRQSSKIR 312

Query: 303 RANGFSNEYIVITILAAAEGEHKLPSINGSGNLKDALQKLGSIPSSRLLAVEVLWTPQ 360
           +A+GFSNEYIV+TIL AAEG HKLP ING+ +LK+AL KLGSIP ++++AVEVLWTPQ
Sbjct: 313 KASGFSNEYIVVTILMAAEGIHKLPPINGTTDLKEALLKLGSIPRNKIMAVEVLWTPQ 370