Miyakogusa Predicted Gene
- Lj1g3v4955320.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4955320.2 Non Chatacterized Hit- tr|A5C2D9|A5C2D9_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,43.97,1e-16,seg,NULL; FAMILY NOT NAMED,NULL;
coiled-coil,NULL,CUFF.33705.2
(148 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G48860.1 | Symbols: | unknown protein; INVOLVED IN: biologic... 130 3e-31
AT3G48860.2 | Symbols: | unknown protein; INVOLVED IN: biologic... 130 4e-31
AT4G08630.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 128 2e-30
AT5G13260.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 127 3e-30
AT5G23700.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 126 5e-30
AT4G25070.2 | Symbols: | unknown protein; EXPRESSED IN: culture... 112 1e-25
AT4G25070.1 | Symbols: | unknown protein; EXPRESSED IN: culture... 112 1e-25
>AT3G48860.1 | Symbols: | unknown protein; INVOLVED IN:
biological_process unknown; LOCATED IN: plasma membrane;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G23700.1); Has 12232 Blast
hits to 9546 proteins in 892 species: Archae - 172;
Bacteria - 1174; Metazoa - 6487; Fungi - 1343; Plants -
856; Viruses - 50; Other Eukaryotes - 2150 (source: NCBI
BLink). | chr3:18117619-18120865 FORWARD LENGTH=494
Length = 494
Score = 130 bits (327), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 66/121 (54%), Positives = 84/121 (69%), Gaps = 2/121 (1%)
Query: 5 EEATSALEKLRLVTQRMILTPEEMEEVVLKRCWLARYWGLCVRHGIHAEIAEAKCKYWST 64
+EA S + LR +TQRMILT +EMEEVVLKRCWLARYWGL V+HGI A+IA ++ ++WS
Sbjct: 320 QEAESEAKSLRTMTQRMILTQDEMEEVVLKRCWLARYWGLAVQHGICADIAPSRQEHWSK 379
Query: 65 FAPNPVEVVLAAGEKAKXXX--XXXXXXXXXXXXXNELSGEGNVENMLFVEQGLRELVSL 122
AP P E+V +A +KAK ++L+GEGN+E+ML VE GLREL SL
Sbjct: 380 LAPLPFELVTSAAQKAKELSWDKGGNDRSKAARDLSDLTGEGNIESMLSVEMGLRELASL 439
Query: 123 K 123
K
Sbjct: 440 K 440
>AT3G48860.2 | Symbols: | unknown protein; INVOLVED IN:
biological_process unknown; LOCATED IN: plasma membrane;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G23700.1); Has 12429 Blast
hits to 9751 proteins in 897 species: Archae - 180;
Bacteria - 1190; Metazoa - 6552; Fungi - 1361; Plants -
886; Viruses - 50; Other Eukaryotes - 2210 (source: NCBI
BLink). | chr3:18117619-18121853 FORWARD LENGTH=577
Length = 577
Score = 130 bits (326), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 66/121 (54%), Positives = 84/121 (69%), Gaps = 2/121 (1%)
Query: 5 EEATSALEKLRLVTQRMILTPEEMEEVVLKRCWLARYWGLCVRHGIHAEIAEAKCKYWST 64
+EA S + LR +TQRMILT +EMEEVVLKRCWLARYWGL V+HGI A+IA ++ ++WS
Sbjct: 320 QEAESEAKSLRTMTQRMILTQDEMEEVVLKRCWLARYWGLAVQHGICADIAPSRQEHWSK 379
Query: 65 FAPNPVEVVLAAGEKAKXXX--XXXXXXXXXXXXXNELSGEGNVENMLFVEQGLRELVSL 122
AP P E+V +A +KAK ++L+GEGN+E+ML VE GLREL SL
Sbjct: 380 LAPLPFELVTSAAQKAKELSWDKGGNDRSKAARDLSDLTGEGNIESMLSVEMGLRELASL 439
Query: 123 K 123
K
Sbjct: 440 K 440
>AT4G08630.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G48860.2); Has 1487 Blast hits to 747 proteins
in 184 species: Archae - 0; Bacteria - 56; Metazoa -
305; Fungi - 197; Plants - 180; Viruses - 3; Other
Eukaryotes - 746 (source: NCBI BLink). |
chr4:5506998-5511959 REVERSE LENGTH=845
Length = 845
Score = 128 bits (321), Expect = 2e-30, Method: Composition-based stats.
Identities = 70/174 (40%), Positives = 92/174 (52%), Gaps = 36/174 (20%)
Query: 6 EATSALEKLRLVTQRMILTPEEMEEVVLKRCWLARYWGLCVRHGIHAEIAEAKCKYWSTF 65
E L L+ VT+R+ILT EEMEEVVLKRCWL+RYWGLCVRHGI +IA K +YWS+F
Sbjct: 541 EVELELNSLKTVTKRLILTQEEMEEVVLKRCWLSRYWGLCVRHGIQPDIAGGKHEYWSSF 600
Query: 66 APNPVEVVLAAGEKAK------------------------------------XXXXXXXX 89
AP P+E+VL+AG++A+
Sbjct: 601 APLPLEIVLSAGQRARDGVSQCNIFHLAAEISLELFGIVLTSLVLTLWSPHQAANNTYGE 660
Query: 90 XXXXXXXXNELSGEGNVENMLFVEQGLRELVSLKKGGRSIGSCNGSTQASKCIE 143
E SGEGN+ENM++VE+GLREL SLK I + + +C++
Sbjct: 661 REKSLQNLQETSGEGNLENMIWVEKGLRELASLKNQSSVIQETDLKYDSLRCLK 714
>AT5G13260.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G48860.2); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses -
0; Other Eukaryotes - 2996 (source: NCBI BLink). |
chr5:4243164-4246677 FORWARD LENGTH=537
Length = 537
Score = 127 bits (319), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 83/122 (68%), Gaps = 5/122 (4%)
Query: 7 ATSALEKLRLVTQRMILTPEEMEEVVLKRCWLARYWGLCVRHGIHAEIAEAKCKYWSTFA 66
A S + LR +T RMILT +EMEEVVLKRCWLARYWGL R+GI ++IA +K +YWS+ A
Sbjct: 298 AESEVNGLRTMTHRMILTQKEMEEVVLKRCWLARYWGLASRYGICSDIATSKYEYWSSLA 357
Query: 67 PNPVEVVLAAGEKAKXXXXXXXXXXXXXXXX-----NELSGEGNVENMLFVEQGLRELVS 121
P P E+VL+AG+KAK N+L+GEGN+E+ML VE GL+EL S
Sbjct: 358 PLPFEIVLSAGQKAKEESWEKESEENEKRSQLVQDINDLTGEGNIESMLSVEMGLKELTS 417
Query: 122 LK 123
LK
Sbjct: 418 LK 419
>AT5G23700.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G48860.2); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses -
0; Other Eukaryotes - 2996 (source: NCBI BLink). |
chr5:7992851-7996420 FORWARD LENGTH=573
Length = 573
Score = 126 bits (317), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/119 (52%), Positives = 82/119 (68%), Gaps = 6/119 (5%)
Query: 5 EEATSALEKLRLVTQRMILTPEEMEEVVLKRCWLARYWGLCVRHGIHAEIAEAKCKYWST 64
+EA S + LR++TQRM+LT +EMEEV LKRCWLARYWGL V+HGI A+IA ++ + WS
Sbjct: 294 QEAESEAKALRIMTQRMVLTQDEMEEVALKRCWLARYWGLAVQHGICADIAPSRHEKWSA 353
Query: 65 FAPNPVEVVLAAGEKAKXXXXXXXXXXXXXXXXNELSGEGNVENMLFVEQGLRELVSLK 123
AP P E+V++A +K K ++L GEGN+E+ML VE GLREL SLK
Sbjct: 354 LAPLPFELVISAAQKTK------DDQSKTARFLSDLPGEGNIESMLSVEMGLRELASLK 406
>AT4G25070.2 | Symbols: | unknown protein; EXPRESSED IN: cultured
cell; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT3G48860.2); Has 30201 Blast hits
to 17322 proteins in 780 species: Archae - 12; Bacteria
- 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037;
Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink). | chr4:12872482-12876468 FORWARD LENGTH=767
Length = 767
Score = 112 bits (280), Expect = 1e-25, Method: Composition-based stats.
Identities = 57/122 (46%), Positives = 80/122 (65%), Gaps = 3/122 (2%)
Query: 5 EEATSALEKLRLVTQRMILTPEEMEEVVLKRCWLARYWGLCVRHGIHAEIAEAKCKYWST 64
+E + ++ LR + R IL+ EEMEEVVLKRCWLARYW L V+HGI +I+ ++ ++WS
Sbjct: 511 QEVEAEIKSLRTMIHRTILSQEEMEEVVLKRCWLARYWELAVQHGICEDISTSRYEHWSA 570
Query: 65 FAPNPVEVVLAAGEKAK---XXXXXXXXXXXXXXXXNELSGEGNVENMLFVEQGLRELVS 121
AP P EVVL+A +K++ ++L+GEGN+E+ML VE GLRE+ S
Sbjct: 571 LAPLPSEVVLSAAQKSEDSWQTGGSDRTWSKVISNFSDLNGEGNIESMLAVETGLREIAS 630
Query: 122 LK 123
LK
Sbjct: 631 LK 632
>AT4G25070.1 | Symbols: | unknown protein; EXPRESSED IN: cultured
cell; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT3G48860.2); Has 14837 Blast hits
to 10961 proteins in 1163 species: Archae - 189;
Bacteria - 1924; Metazoa - 7665; Fungi - 1127; Plants -
653; Viruses - 80; Other Eukaryotes - 3199 (source: NCBI
BLink). | chr4:12872482-12876468 FORWARD LENGTH=765
Length = 765
Score = 112 bits (279), Expect = 1e-25, Method: Composition-based stats.
Identities = 57/122 (46%), Positives = 80/122 (65%), Gaps = 3/122 (2%)
Query: 5 EEATSALEKLRLVTQRMILTPEEMEEVVLKRCWLARYWGLCVRHGIHAEIAEAKCKYWST 64
+E + ++ LR + R IL+ EEMEEVVLKRCWLARYW L V+HGI +I+ ++ ++WS
Sbjct: 509 QEVEAEIKSLRTMIHRTILSQEEMEEVVLKRCWLARYWELAVQHGICEDISTSRYEHWSA 568
Query: 65 FAPNPVEVVLAAGEKAK---XXXXXXXXXXXXXXXXNELSGEGNVENMLFVEQGLRELVS 121
AP P EVVL+A +K++ ++L+GEGN+E+ML VE GLRE+ S
Sbjct: 569 LAPLPSEVVLSAAQKSEDSWQTGGSDRTWSKVISNFSDLNGEGNIESMLAVETGLREIAS 628
Query: 122 LK 123
LK
Sbjct: 629 LK 630