Miyakogusa Predicted Gene
- Lj1g3v4955040.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4955040.1 gi|37222543|gb|AF279703.2|.path1.1
(550 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G27380.1 | Symbols: GSH2, GSHB | glutathione synthetase 2 | c... 709 0.0
>AT5G27380.1 | Symbols: GSH2, GSHB | glutathione synthetase 2 |
chr5:9668211-9670912 REVERSE LENGTH=539
Length = 539
Score = 709 bits (1830), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/465 (69%), Positives = 395/465 (84%)
Query: 85 FDQQLLQKIADDALVWASLHGLVMGDKSVQRSGTVPGVGLVHAPFALFPTLFPESQWRQA 144
D + +QK+ DALVW+SLHGLV+GDKS Q+SG VPGVGL+HAP AL PT FPE+ W+QA
Sbjct: 74 LDDEFVQKLVYDALVWSSLHGLVVGDKSYQKSGNVPGVGLMHAPIALLPTAFPEAYWKQA 133
Query: 145 CDLAPIFNELVDRVSLDGKFLQESLSRTKEVDEFTSRLLDIHSKMLAINKKEEIRLGLHR 204
C++ P+FNEL+DRVSLDGKFLQ+SLSRTK+VD FTSRLLDIHSKML NKKE+IRLGLHR
Sbjct: 134 CNVTPLFNELIDRVSLDGKFLQDSLSRTKKVDVFTSRLLDIHSKMLERNKKEDIRLGLHR 193
Query: 205 SDYMLDEKTKSLLQIELNTISSSFAGLGSLVTELHRYILSRYGKLLGLDSGKVPANNAAT 264
DYMLDE+T SLLQIE+NTIS SF GL LV++LH+ +L YG +G+DS +VP N +
Sbjct: 194 FDYMLDEETNSLLQIEMNTISCSFPGLSRLVSQLHQSLLRSYGDQIGIDSERVPINTSTI 253
Query: 265 QFAEGLARAWTEYNDPRAVIMIVVQAEERNMYDQHFLSAVLRDRHQIAIVRKTLAEVDRE 324
QFA+ LA+AW EY++PRAV+M++VQ EERNMYDQH LS++LR++H I ++RKTLAEV++E
Sbjct: 254 QFADALAKAWLEYSNPRAVVMVIVQPEERNMYDQHLLSSILREKHNIVVIRKTLAEVEKE 313
Query: 325 GEILPDGTLSVDGQRIAVVYFRAGYTPVDYPSESEWRARLLMEQSSAIKCPSISYHLVGT 384
G + D TL V GQ +AVVYFR+GYTP D+PSESEW ARLL+E+SSA+KCPSI+YHL G+
Sbjct: 314 GSVQEDETLIVGGQAVAVVYFRSGYTPNDHPSESEWNARLLIEESSAVKCPSIAYHLTGS 373
Query: 385 KKIQQELANPGVLERFLENKGDIAKLRECFAGLWSLDDYDITRKAIEKPELFVMKPQREG 444
KKIQQELA PGVLERFL+NK DIAKLR+CFAGLWSLDD +I ++AIEKP LFVMKPQREG
Sbjct: 374 KKIQQELAKPGVLERFLDNKEDIAKLRKCFAGLWSLDDSEIVKQAIEKPGLFVMKPQREG 433
Query: 445 GGNNIYGNAVRETLLKLQQAGSQEDAAYILMQRIFPTLSAAVLMRNGCWHKDHAVSELGI 504
GGNNIYG+ VRE LL+LQ+ G + +AAYILMQRIFP +S L+R G +HK A+SELG+
Sbjct: 434 GGNNIYGDDVRENLLRLQKEGEEGNAAYILMQRIFPKVSNMFLVREGVYHKHQAISELGV 493
Query: 505 FSTYLRNKDRVVMNNQSGYLMRTKISSSDEGGVAAGFAVLDSVYL 549
+ YLR+KD V++N QSGYLMRTKI+SSDEGGVAAGF VLDS+YL
Sbjct: 494 YGAYLRSKDEVIVNEQSGYLMRTKIASSDEGGVAAGFGVLDSIYL 538