Miyakogusa Predicted Gene
- Lj1g3v4931600.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4931600.1 Non Chatacterized Hit- tr|I1JRC9|I1JRC9_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,85.67,0,PPR:
pentatricopeptide repeat domain,Pentatricopeptide repeat;
PPR,Pentatricopeptide repeat; PPR_2,P,CUFF.33650.1
(651 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 786 0.0
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 404 e-112
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 389 e-108
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 379 e-105
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 379 e-105
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 378 e-105
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 377 e-104
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 377 e-104
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 377 e-104
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 372 e-103
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 369 e-102
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 368 e-102
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 367 e-101
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 366 e-101
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 364 e-101
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 362 e-100
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 362 e-100
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 362 e-100
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 361 e-100
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 360 1e-99
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 356 3e-98
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 354 9e-98
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 353 3e-97
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 352 4e-97
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 352 4e-97
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 352 4e-97
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 350 1e-96
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 350 2e-96
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 348 7e-96
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 347 1e-95
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 347 1e-95
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 346 3e-95
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 342 4e-94
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 342 6e-94
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 341 1e-93
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 340 2e-93
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 339 4e-93
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 337 1e-92
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 333 2e-91
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 333 3e-91
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 332 7e-91
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 328 5e-90
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 328 8e-90
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 326 4e-89
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 325 5e-89
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 325 5e-89
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 325 5e-89
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 325 7e-89
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 325 7e-89
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 323 3e-88
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 323 3e-88
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 322 4e-88
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 322 5e-88
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 322 5e-88
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 321 1e-87
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 320 2e-87
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 318 8e-87
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 318 9e-87
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 1e-86
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 316 4e-86
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 315 5e-86
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 6e-86
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 315 9e-86
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 314 2e-85
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 313 2e-85
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 313 3e-85
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 310 1e-84
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 309 5e-84
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 306 3e-83
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 306 4e-83
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 305 5e-83
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 304 1e-82
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 303 2e-82
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 303 3e-82
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 303 3e-82
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 302 5e-82
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 301 8e-82
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 1e-81
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 300 2e-81
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 300 2e-81
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 300 3e-81
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 6e-81
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 7e-81
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 297 1e-80
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 296 3e-80
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 296 4e-80
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 296 4e-80
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 295 5e-80
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 295 6e-80
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 294 1e-79
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 293 3e-79
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 293 3e-79
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 291 7e-79
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 291 1e-78
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 1e-78
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 288 7e-78
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 288 9e-78
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 286 2e-77
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 286 3e-77
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 4e-77
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 286 4e-77
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 285 5e-77
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 8e-77
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 283 2e-76
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 282 6e-76
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 9e-76
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 3e-75
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 1e-74
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 3e-74
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 4e-74
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 5e-74
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 1e-73
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 274 1e-73
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 274 2e-73
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 2e-73
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 273 4e-73
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 4e-73
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 6e-73
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 1e-72
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 1e-72
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 1e-72
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 270 2e-72
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 269 4e-72
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 9e-72
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 266 3e-71
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 5e-71
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 2e-70
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 9e-70
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 6e-69
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 258 1e-68
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 258 1e-68
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 1e-68
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 257 2e-68
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 2e-67
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 3e-67
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 252 6e-67
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 252 7e-67
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 250 2e-66
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 3e-66
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 250 3e-66
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 6e-66
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 247 2e-65
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 246 3e-65
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 245 9e-65
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 243 3e-64
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 243 4e-64
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 7e-64
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 240 3e-63
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 4e-63
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 9e-63
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 1e-62
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 4e-62
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 235 6e-62
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 235 8e-62
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 2e-61
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 3e-61
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 3e-61
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 5e-61
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 6e-61
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 7e-61
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 1e-60
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 231 1e-60
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 5e-60
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 9e-60
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 227 2e-59
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 2e-59
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 224 2e-58
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 3e-58
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 3e-58
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 9e-58
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 220 2e-57
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 3e-57
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 219 4e-57
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 1e-56
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 3e-56
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 8e-56
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 215 8e-56
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 1e-55
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 4e-55
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 212 9e-55
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 3e-54
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 4e-54
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 5e-54
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 208 9e-54
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 6e-52
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 7e-52
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 8e-52
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 1e-49
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 3e-49
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 4e-49
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 6e-49
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 6e-45
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 177 2e-44
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 4e-44
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 1e-42
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 1e-38
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 153 5e-37
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 3e-31
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 3e-28
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 2e-27
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 3e-27
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 5e-27
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 112 1e-24
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 2e-24
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 102 7e-22
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 8e-22
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-21
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 5e-21
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 5e-21
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 99 7e-21
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 8e-21
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 1e-20
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 97 3e-20
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 4e-20
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 5e-20
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 9e-20
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 4e-19
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 6e-19
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 6e-19
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 9e-19
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 2e-18
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 91 3e-18
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 6e-18
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 6e-18
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 89 7e-18
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 8e-18
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 2e-17
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 4e-17
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 5e-17
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 8e-17
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 9e-17
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 9e-17
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 9e-17
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 84 4e-16
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 6e-16
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 6e-16
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 9e-16
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 9e-16
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 80 5e-15
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 6e-15
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 1e-14
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 8e-14
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 8e-14
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 75 2e-13
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 73 5e-13
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 7e-13
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 7e-13
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 71 2e-12
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 2e-12
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 7e-12
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 69 1e-11
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 2e-11
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 3e-11
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 4e-11
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 67 4e-11
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 64 3e-10
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 5e-10
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 63 6e-10
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 8e-10
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 8e-10
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 62 1e-09
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 61 2e-09
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 61 3e-09
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 60 3e-09
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 60 3e-09
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 4e-09
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 4e-09
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 4e-09
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 60 5e-09
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 7e-09
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 59 1e-08
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 58 2e-08
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 3e-08
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 58 3e-08
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 55 1e-07
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 4e-07
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 8e-07
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-06
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 786 bits (2031), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/651 (60%), Positives = 480/651 (73%), Gaps = 9/651 (1%)
Query: 5 RKFNTHLPSWVDSL--KSKAPISQYPFPATSESVLNHAHLSSLLSVCGRDGNL-HLGSSI 61
+K +HLPS + ++ SK I Q P S +LNH +S LLS+CGR+G HLG +
Sbjct: 8 QKLTSHLPSCLSTVLSPSKILIRQSPNYQVSTFLLNHVDMSLLLSICGREGWFPHLGPCL 67
Query: 62 HARIIKQPPFFS-FDSS-RRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSM 119
HA IIK P FF D+ RNAL VWNSLLS+Y+KCG+L DAIKLFD MP+RD +S N +
Sbjct: 68 HASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIV 127
Query: 120 ISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFV 179
GFLRNR+ ++GF K+M S FD ATLT +LS CD PEF V++MIH L +
Sbjct: 128 FYGFLRNRETESGFVLLKRMLGS----GGFDHATLTIVLSVCDTPEFCLVTKMIHALAIL 183
Query: 180 GGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRL 239
G+++EI+VGN LITSYFKCGC GR VFD M RNV+T TAVISGL +NEL+EDGLRL
Sbjct: 184 SGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRL 243
Query: 240 FAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSK 299
F+ MR G V PN++TYLS+L ACSG Q + EG++IH LLWK G++S+LCIESALMD+YSK
Sbjct: 244 FSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSK 303
Query: 300 CGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAV 359
CGS+E AW IFES E+D VS+TVILV AQNG EEEAIQ F R++ G+E+DAN+VSAV
Sbjct: 304 CGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAV 363
Query: 360 LGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNS 419
LGV + SL LGKQ+HSL+IK+ FS N FV+NGLINMYSKCG+L DS VF M ++N
Sbjct: 364 LGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNY 423
Query: 420 ISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVS 479
+SWNS+IAAFARHG G AL+ YEEM + PTDVTFLSLLHACSH GL++KG E L
Sbjct: 424 VSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNE 483
Query: 480 MTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSE 539
M H + PR+EHY C++DMLGRAGLLKEAK+FI+ LP +WQALLGACS HGD+E
Sbjct: 484 MKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTE 543
Query: 540 MGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEID 599
+G++AA+QL AP SS+ H+L+ANIYS+ GKWKERA IKRMK GV KE G+S IEI+
Sbjct: 544 VGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIE 603
Query: 600 KQVSSFVVGDKLHPQADIIFLELSRLLKHLKDEGYVPDKRCILYYLDQDKK 650
+ SFVV DKLHPQA+ I+ LS L + DEGY PDKR IL Y D+
Sbjct: 604 HKTHSFVVEDKLHPQAEAIYDVLSGLFPVMVDEGYRPDKRFILCYTGDDRN 654
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 404 bits (1038), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/610 (35%), Positives = 334/610 (54%), Gaps = 11/610 (1%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDA 101
L+SL+ C DG L G +HA K F S+ + + +LL++Y+KC +++ A
Sbjct: 392 LASLVVACSADGTLFRGQQLHAYTTK----LGFASNNK----IEGALLNLYAKCADIETA 443
Query: 102 IKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSAC 161
+ F V + V WN M+ + D FR F+QM V +++ T ++L C
Sbjct: 444 LDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQY---TYPSILKTC 500
Query: 162 DGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWT 221
+ IH + F+ V + LI Y K G + ++VV+WT
Sbjct: 501 IRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWT 560
Query: 222 AVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKL 281
+I+G Q + L F QM + + + +++ AC+G+QAL EG++IH
Sbjct: 561 TMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS 620
Query: 282 GMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIF 341
G SDL ++AL+ LYS+CG +E ++ FE E D ++ ++ F Q+G EEA+++F
Sbjct: 621 GFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVF 680
Query: 342 TRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKC 401
R+ GI+ + + + ++ GKQ+H++I K + V N LI+MY+KC
Sbjct: 681 VRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKC 740
Query: 402 GELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLL 461
G + D+ + F E++ KN +SWN++I A+++HG GS AL +++M + P VT + +L
Sbjct: 741 GSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVL 800
Query: 462 HACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRG 521
ACSH GLV+KG+ + SM ++ LSP+ EHY CVVDML RAGLL AK FI+ +P
Sbjct: 801 SACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPD 860
Query: 522 VLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKR 581
LVW+ LL AC +H + E+G+FAA L+ P SA +VL++N+Y+ KW R ++
Sbjct: 861 ALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQK 920
Query: 582 MKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDEGYVPDKRCI 641
MKEKGV KE G SWIE+ + SF VGD+ HP AD I L K + GYV D +
Sbjct: 921 MKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSL 980
Query: 642 LYYLDQDKKD 651
L L ++KD
Sbjct: 981 LNELQHEQKD 990
Score = 213 bits (541), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 141/498 (28%), Positives = 243/498 (48%), Gaps = 21/498 (4%)
Query: 38 NHAHLSSLLSVCGR-DGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCG 96
NH L LL C + +G+L G +H++I+K DS+ + L Y G
Sbjct: 83 NHQTLKWLLEGCLKTNGSLDEGRKLHSQILK----LGLDSNG----CLSEKLFDFYLFKG 134
Query: 97 ELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQM-SESRTVYSRFDKATLT 155
+L A K+FD MP R +WN MI F F +M SE+ T ++ T +
Sbjct: 135 DLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTP----NEGTFS 190
Query: 156 TMLSACDGPEFS-SVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIE 214
+L AC G + V IH + G V N LI Y + G R+VFD +
Sbjct: 191 GVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRL 250
Query: 215 RNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKI 274
++ +W A+ISGL++NE + +RLF M + P + S L AC +++L G ++
Sbjct: 251 KDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQL 310
Query: 275 HGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFE 334
HGL+ KLG SD + +AL+ LY G+L A IF + + D V+ ++ +Q G+
Sbjct: 311 HGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYG 370
Query: 335 EEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGL 394
E+A+++F R+ G+E D+N +++++ +L G+Q+H+ K F+ N + L
Sbjct: 371 EKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGAL 430
Query: 395 INMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTD 454
+N+Y+KC ++ +L F E +N + WN ++ A+ D + + + +M++ I P
Sbjct: 431 LNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQ 490
Query: 455 VTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYAC--VVDMLGRAGLLKEAKNF 512
T+ S+L C G +E G + + + + + Y C ++DM + G L A +
Sbjct: 491 YTYPSILKTCIRLGDLELGEQIHSQIIKTNF---QLNAYVCSVLIDMYAKLGKLDTAWDI 547
Query: 513 IEGLPENRGVLVWQALLG 530
+ + V+ W ++
Sbjct: 548 LIRFA-GKDVVSWTTMIA 564
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 150/534 (28%), Positives = 252/534 (47%), Gaps = 29/534 (5%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDA 101
SS+LS C + +L +G +H ++K FS D+ +V N+L+S+Y G L A
Sbjct: 291 FSSVLSACKKIESLEIGEQLHGLVLKLG--FSSDT------YVCNALVSLYFHLGNLISA 342
Query: 102 IKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSAC 161
+F M RD V++N++I+G + + FK+M D TL +++ AC
Sbjct: 343 EHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGL---EPDSNTLASLVVAC 399
Query: 162 --DGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVT 219
DG F + +H GF + AL+ Y KC F E NVV
Sbjct: 400 SADGTLFRG--QQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVL 457
Query: 220 WTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLW 279
W ++ + + R+F QM+ + PN TY S L C + L G +IH +
Sbjct: 458 WNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQII 517
Query: 280 KLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQ 339
K Q + + S L+D+Y+K G L+ AW I D VS T ++ + Q F+++A+
Sbjct: 518 KTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALT 577
Query: 340 IFTRIVTLGIEVD----ANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLI 395
F +++ GI D N VSA G+ +L G+QIH+ FS + N L+
Sbjct: 578 TFRQMLDRGIRSDEVGLTNAVSACAGL----QALKEGQQIHAQACVSGFSSDLPFQNALV 633
Query: 396 NMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDV 455
+YS+CG++ +S F + ++I+WN++++ F + G+ AL+ + M GI +
Sbjct: 634 TLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNF 693
Query: 456 TFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEA-KNFIE 514
TF S + A S +++G + +T+ S +E ++ M + G + +A K F+E
Sbjct: 694 TFGSAVKAASETANMKQGKQVHAVITKTGYDS-ETEVCNALISMYAKCGSISDAEKQFLE 752
Query: 515 GLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSA 568
+N + W A++ A S HG + DQ+I + + HV + + SA
Sbjct: 753 VSTKNE--VSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPN--HVTLVGVLSA 802
Score = 169 bits (428), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 127/447 (28%), Positives = 209/447 (46%), Gaps = 58/447 (12%)
Query: 34 ESVLNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYS 93
E V N S+L C R G+L LG IH++IIK F ++ +V + L+ MY+
Sbjct: 485 EIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTN--FQLNA------YVCSVLIDMYA 536
Query: 94 KCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKAT 153
K G+L A + R +D VSW +MI+G+ + D F+QM + R + R D+
Sbjct: 537 KLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLD-RGI--RSDEVG 593
Query: 154 LTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMI 213
LT +SAC G + + IH V GF ++ NAL+T Y +CG + F++
Sbjct: 594 LTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTE 653
Query: 214 ERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRK 273
+ + W A++SG Q+ E+ LR+F +M + N T+ S++ A S + +G++
Sbjct: 654 AGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQ 713
Query: 274 IHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGF 333
+H ++ K G S+ + +AL+ +Y+KCGS+ A + F + VS I+ A++++GF
Sbjct: 714 VHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGF 773
Query: 334 EEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNG 393
EA+ F ++ IHS N N G
Sbjct: 774 GSEALDSFDQM------------------------------IHS-----NVRPNHVTLVG 798
Query: 394 LINMYSKCGELHDSLQVFYEMTQKNSIS-----WNSVIAAFARHGDGSRALQFYEEMRVG 448
+++ S G + + F M + +S + V+ R G SRA +F +EM
Sbjct: 799 VLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEM--- 855
Query: 449 GIAPTDVTFLSLLHACSHAGLVEKGME 475
I P + + +LL AC +V K ME
Sbjct: 856 PIKPDALVWRTLLSAC----VVHKNME 878
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 389 bits (999), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/603 (34%), Positives = 334/603 (55%), Gaps = 13/603 (2%)
Query: 41 HLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQD 100
+ + LL VCG + L +G IH ++K FS D LF L +MY+KC ++ +
Sbjct: 137 NFTYLLKVCGDEAELRVGKEIHGLLVKSG--FSLD------LFAMTGLENMYAKCRQVNE 188
Query: 101 AIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSA 160
A K+FDRMP RD VSWN++++G+ +N K M E S T+ ++L A
Sbjct: 189 ARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFI---TIVSVLPA 245
Query: 161 CDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTW 220
SV + IHG GF+ + + AL+ Y KCG RQ+FD M+ERNVV+W
Sbjct: 246 VSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSW 305
Query: 221 TAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWK 280
++I QNE ++ + +F +M V P ++ + +L AC+ + L GR IH L +
Sbjct: 306 NSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVE 365
Query: 281 LGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQI 340
LG+ ++ + ++L+ +Y KC ++ A +F + VS +++ FAQNG +A+
Sbjct: 366 LGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNY 425
Query: 341 FTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSK 400
F+++ + ++ D +V+ + K IH ++++ +N FV+ L++MY+K
Sbjct: 426 FSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAK 485
Query: 401 CGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSL 460
CG + + +F M++++ +WN++I + HG G AL+ +EEM+ G I P VTFLS+
Sbjct: 486 CGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSV 545
Query: 461 LHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENR 520
+ ACSH+GLVE G++ M ++ + +HY +VD+LGRAG L EA +FI +P
Sbjct: 546 ISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKP 605
Query: 521 GVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIK 580
V V+ A+LGAC IH + + AA++L P HVL+ANIY A W E+ G ++
Sbjct: 606 AVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMW-EKVGQVR 664
Query: 581 -RMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDEGYVPDKR 639
M +G+ K G S +EI +V SF G HP + I+ L +L+ H+K+ GYVPD
Sbjct: 665 VSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTN 724
Query: 640 CIL 642
+L
Sbjct: 725 LVL 727
Score = 212 bits (539), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 129/460 (28%), Positives = 237/460 (51%), Gaps = 17/460 (3%)
Query: 83 FVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSES 142
F L+S++ + G + +A ++F+ + + V +++M+ GF + D D +FF +M
Sbjct: 70 FFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRM--- 126
Query: 143 RTVYSRFDKA-----TLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYF 197
R+D T +L C V + IHGL+ GF ++ L Y
Sbjct: 127 -----RYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYA 181
Query: 198 KCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLS 257
KC + R+VFD M ER++V+W +++G +QN + L + M ++ P+ +T +S
Sbjct: 182 KCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVS 241
Query: 258 SLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELD 317
L A S ++ ++ G++IHG + G S + I +AL+D+Y+KCGSLE A Q+F+ E +
Sbjct: 242 VLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERN 301
Query: 318 GVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIE-VDANMVSAVLGVFGVGTSLPLGKQIH 376
VS ++ A+ QN +EA+ IF +++ G++ D +++ A+ +G L G+ IH
Sbjct: 302 VVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLG-DLERGRFIH 360
Query: 377 SLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGS 436
L ++ +N V N LI+MY KC E+ + +F ++ + +SWN++I FA++G
Sbjct: 361 KLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPI 420
Query: 437 RALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACV 496
AL ++ +MR + P T++S++ A + + +++ + L +
Sbjct: 421 DALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHA-KWIHGVVMRSCLDKNVFVTTAL 479
Query: 497 VDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHG 536
VDM + G + A+ + + E R V W A++ HG
Sbjct: 480 VDMYAKCGAIMIARLIFDMMSE-RHVTTWNAMIDGYGTHG 518
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 178/359 (49%), Gaps = 2/359 (0%)
Query: 171 RMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQN 230
R I LVF G +E L++ + + G + +VF+ + + V + ++ G A+
Sbjct: 54 RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKV 113
Query: 231 ELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIE 290
+ L+ F +MR V P + L C L G++IHGLL K G DL
Sbjct: 114 SDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAM 173
Query: 291 SALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIE 350
+ L ++Y+KC + A ++F+ E D VS I+ ++QNG A+++ + ++
Sbjct: 174 TGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLK 233
Query: 351 VDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQV 410
+ +VL + +GK+IH ++ F +S L++MY+KCG L + Q+
Sbjct: 234 PSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQL 293
Query: 411 FYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLV 470
F M ++N +SWNS+I A+ ++ + A+ +++M G+ PTDV+ + LHAC+ G +
Sbjct: 294 FDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDL 353
Query: 471 EKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALL 529
E+G F+ ++ + L ++ M + + A + G ++R ++ W A++
Sbjct: 354 ERG-RFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMF-GKLQSRTLVSWNAMI 410
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 146/271 (53%), Gaps = 14/271 (5%)
Query: 267 ALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILV 326
+L E R+I L++K G+ + ++ L+ L+ + GS++ A ++FE + V +L
Sbjct: 49 SLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLK 108
Query: 327 AFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQ 386
FA+ ++A+Q F R+ +E + +L V G L +GK+IH L++K FS
Sbjct: 109 GFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSL 168
Query: 387 NPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMR 446
+ F GL NMY+KC +++++ +VF M +++ +SWN+++A ++++G AL+ + M
Sbjct: 169 DLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMC 228
Query: 447 VGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACV------VDML 500
+ P+ +T +S+L A S L+ G E H + RS + V VDM
Sbjct: 229 EENLKPSFITIVSVLPAVSALRLISVGKEI-------HGYAMRSGFDSLVNISTALVDMY 281
Query: 501 GRAGLLKEAKNFIEGLPENRGVLVWQALLGA 531
+ G L+ A+ +G+ E R V+ W +++ A
Sbjct: 282 AKCGSLETARQLFDGMLE-RNVVSWNSMIDA 311
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 20/184 (10%)
Query: 367 TSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVI 426
+SL +QI L+ K Q F L++++ + G + ++ +VF + K ++ +++++
Sbjct: 48 SSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTML 107
Query: 427 AAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRL 486
FA+ D +ALQF+ MR + P F LL C + G E H L
Sbjct: 108 KGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEI-------HGL 160
Query: 487 SPRSEHYACVVDMLGRAGL---------LKEAKNFIEGLPENRGVLVWQALLGACSIHGD 537
+S +D+ GL + EA+ + +PE R ++ W ++ S +G
Sbjct: 161 LVKS---GFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPE-RDLVSWNTIVAGYSQNGM 216
Query: 538 SEMG 541
+ M
Sbjct: 217 ARMA 220
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 379 bits (974), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/617 (34%), Positives = 342/617 (55%), Gaps = 14/617 (2%)
Query: 37 LNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCG 96
+N +S+LLSV G + G IH ++K FDS + V N+LL MY+ G
Sbjct: 259 VNSTTVSTLLSVLGHVDHQKWGRGIHGLVVK----MGFDS----VVCVCNTLLRMYAGAG 310
Query: 97 ELQDAIKLFDRMPVRDTVSWNSMISGFLRN-RDFDAGFRFFKQMSESRTVYSRFDKATLT 155
+A +F +MP +D +SWNS+++ F+ + R DA +S ++V + T T
Sbjct: 311 RSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSV----NYVTFT 366
Query: 156 TMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIER 215
+ L+AC P+F R++HGLV V G +GNAL++ Y K G + R+V +M R
Sbjct: 367 SALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRR 426
Query: 216 NVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAE-GRKI 274
+VV W A+I G A++E + L F MR VS N +T +S L AC L E G+ +
Sbjct: 427 DVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPL 486
Query: 275 HGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFE 334
H + G +SD ++++L+ +Y+KCG L + +F + + ++ +L A A +G
Sbjct: 487 HAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHG 546
Query: 335 EEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGL 394
EE +++ +++ + G+ +D S L L G+Q+H L +K F + F+ N
Sbjct: 547 EEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAA 606
Query: 395 INMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTD 454
+MYSKCGE+ + +++ ++ SWN +I+A RHG + EM GI P
Sbjct: 607 ADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGH 666
Query: 455 VTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIE 514
VTF+SLL ACSH GLV+KG+ + + RD L P EH CV+D+LGR+G L EA+ FI
Sbjct: 667 VTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFIS 726
Query: 515 GLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKE 574
+P LVW++LL +C IHG+ + G+ AA+ L P + +VL +N+++ G+W++
Sbjct: 727 KMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWED 786
Query: 575 RAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDEGY 634
K+M K + K+ SW+++ +VSSF +GD+ HPQ I+ +L + K +K+ GY
Sbjct: 787 VENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGY 846
Query: 635 VPDKRCILYYLDQDKKD 651
V D L D+++K+
Sbjct: 847 VADTSQALQDTDEEQKE 863
Score = 212 bits (540), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 146/443 (32%), Positives = 226/443 (51%), Gaps = 8/443 (1%)
Query: 91 MYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFD 150
MY+K G ++ A LFD MPVR+ VSWN+M+SG +R + G FF++M + S F
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 151 KATLTTMLSAC--DGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQV 208
A+L T AC G F +HG V G ++ V A++ Y G R+V
Sbjct: 61 IASLVT---ACGRSGSMFRE-GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKV 116
Query: 209 FDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQAL 268
F+EM +RNVV+WT+++ G + E+ + ++ MRG V N + + +C ++
Sbjct: 117 FEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDE 176
Query: 269 AEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAF 328
+ GR+I G + K G++S L +E++L+ + G+++ A IF+ E D +S I A+
Sbjct: 177 SLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAY 236
Query: 329 AQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNP 388
AQNG EE+ +IF+ + EV++ VS +L V G G+ IH L++K F
Sbjct: 237 AQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVV 296
Query: 389 FVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVG 448
V N L+ MY+ G ++ VF +M K+ ISWNS++A+F G AL M
Sbjct: 297 CVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISS 356
Query: 449 GIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKE 508
G + VTF S L AC EKG L + L +V M G+ G + E
Sbjct: 357 GKSVNYVTFTSALAACFTPDFFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSE 415
Query: 509 AKNFIEGLPENRGVLVWQALLGA 531
++ + +P R V+ W AL+G
Sbjct: 416 SRRVLLQMPR-RDVVAWNALIGG 437
Score = 203 bits (517), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 134/504 (26%), Positives = 253/504 (50%), Gaps = 23/504 (4%)
Query: 42 LSSLLSVCGRDGNL-HLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQD 100
++SL++ CGR G++ G +H + K S + ++V ++L +Y G +
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAK--------SGLLSDVYVSTAILHLYGVYGLVSC 112
Query: 101 AIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSA 160
+ K+F+ MP R+ VSW S++ G+ + + +K M R ++ +++ ++S+
Sbjct: 113 SRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGM---RGEGVGCNENSMSLVISS 169
Query: 161 CDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTW 220
C + S+ R I G V G E ++ V N+LI+ G +FD+M ER+ ++W
Sbjct: 170 CGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISW 229
Query: 221 TAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWK 280
++ + AQN E+ R+F+ MR N+ T + L V GR IHGL+ K
Sbjct: 230 NSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVK 289
Query: 281 LGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQI 340
+G S +C+ + L+ +Y+ G A +F+ D +S ++ +F +G +A+ +
Sbjct: 290 MGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGL 349
Query: 341 FTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSK 400
+++ G V+ ++ L G+ +H L++ N + N L++MY K
Sbjct: 350 LCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGK 409
Query: 401 CGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSL 460
GE+ +S +V +M +++ ++WN++I +A D +AL ++ MRV G++ +T +S+
Sbjct: 410 IGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSV 469
Query: 461 LHACSHAG-LVEKGME---FLVSMTRDHRLSPRSEHYA-CVVDMLGRAGLLKEAKNFIEG 515
L AC G L+E+G ++VS + EH ++ M + G L +++ G
Sbjct: 470 LSACLLPGDLLERGKPLHAYIVSAGFE-----SDEHVKNSLITMYAKCGDLSSSQDLFNG 524
Query: 516 LPENRGVLVWQALLGACSIHGDSE 539
L +NR ++ W A+L A + HG E
Sbjct: 525 L-DNRNIITWNAMLAANAHHGHGE 547
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 379 bits (973), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/617 (34%), Positives = 342/617 (55%), Gaps = 14/617 (2%)
Query: 37 LNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCG 96
+N +S+LLSV G + G IH ++K FDS + V N+LL MY+ G
Sbjct: 242 VNSTTVSTLLSVLGHVDHQKWGRGIHGLVVK----MGFDS----VVCVCNTLLRMYAGAG 293
Query: 97 ELQDAIKLFDRMPVRDTVSWNSMISGFLRN-RDFDAGFRFFKQMSESRTVYSRFDKATLT 155
+A +F +MP +D +SWNS+++ F+ + R DA +S ++V + T T
Sbjct: 294 RSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSV----NYVTFT 349
Query: 156 TMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIER 215
+ L+AC P+F R++HGLV V G +GNAL++ Y K G + R+V +M R
Sbjct: 350 SALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRR 409
Query: 216 NVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAE-GRKI 274
+VV W A+I G A++E + L F MR VS N +T +S L AC L E G+ +
Sbjct: 410 DVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPL 469
Query: 275 HGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFE 334
H + G +SD ++++L+ +Y+KCG L + +F + + ++ +L A A +G
Sbjct: 470 HAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHG 529
Query: 335 EEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGL 394
EE +++ +++ + G+ +D S L L G+Q+H L +K F + F+ N
Sbjct: 530 EEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAA 589
Query: 395 INMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTD 454
+MYSKCGE+ + +++ ++ SWN +I+A RHG + EM GI P
Sbjct: 590 ADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGH 649
Query: 455 VTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIE 514
VTF+SLL ACSH GLV+KG+ + + RD L P EH CV+D+LGR+G L EA+ FI
Sbjct: 650 VTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFIS 709
Query: 515 GLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKE 574
+P LVW++LL +C IHG+ + G+ AA+ L P + +VL +N+++ G+W++
Sbjct: 710 KMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWED 769
Query: 575 RAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDEGY 634
K+M K + K+ SW+++ +VSSF +GD+ HPQ I+ +L + K +K+ GY
Sbjct: 770 VENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGY 829
Query: 635 VPDKRCILYYLDQDKKD 651
V D L D+++K+
Sbjct: 830 VADTSQALQDTDEEQKE 846
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 134/504 (26%), Positives = 253/504 (50%), Gaps = 23/504 (4%)
Query: 42 LSSLLSVCGRDGNL-HLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQD 100
++SL++ CGR G++ G +H + K S + ++V ++L +Y G +
Sbjct: 44 IASLVTACGRSGSMFREGVQVHGFVAK--------SGLLSDVYVSTAILHLYGVYGLVSC 95
Query: 101 AIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSA 160
+ K+F+ MP R+ VSW S++ G+ + + +K M R ++ +++ ++S+
Sbjct: 96 SRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGM---RGEGVGCNENSMSLVISS 152
Query: 161 CDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTW 220
C + S+ R I G V G E ++ V N+LI+ G +FD+M ER+ ++W
Sbjct: 153 CGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISW 212
Query: 221 TAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWK 280
++ + AQN E+ R+F+ MR N+ T + L V GR IHGL+ K
Sbjct: 213 NSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVK 272
Query: 281 LGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQI 340
+G S +C+ + L+ +Y+ G A +F+ D +S ++ +F +G +A+ +
Sbjct: 273 MGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGL 332
Query: 341 FTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSK 400
+++ G V+ ++ L G+ +H L++ N + N L++MY K
Sbjct: 333 LCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGK 392
Query: 401 CGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSL 460
GE+ +S +V +M +++ ++WN++I +A D +AL ++ MRV G++ +T +S+
Sbjct: 393 IGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSV 452
Query: 461 LHACSHAG-LVEKGM---EFLVSMTRDHRLSPRSEHYA-CVVDMLGRAGLLKEAKNFIEG 515
L AC G L+E+G ++VS + EH ++ M + G L +++ G
Sbjct: 453 LSACLLPGDLLERGKPLHAYIVSAGFE-----SDEHVKNSLITMYAKCGDLSSSQDLFNG 507
Query: 516 LPENRGVLVWQALLGACSIHGDSE 539
L +NR ++ W A+L A + HG E
Sbjct: 508 L-DNRNIITWNAMLAANAHHGHGE 530
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 138/426 (32%), Positives = 215/426 (50%), Gaps = 8/426 (1%)
Query: 108 MPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSAC--DGPE 165
MPVR+ VSWN+M+SG +R + G FF++M + S F A+L T AC G
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVT---ACGRSGSM 57
Query: 166 FSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVIS 225
F +HG V G ++ V A++ Y G R+VF+EM +RNVV+WT+++
Sbjct: 58 FRE-GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMV 116
Query: 226 GLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQS 285
G + E+ + ++ MRG V N + + +C ++ + GR+I G + K G++S
Sbjct: 117 GYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLES 176
Query: 286 DLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIV 345
L +E++L+ + G+++ A IF+ E D +S I A+AQNG EE+ +IF+ +
Sbjct: 177 KLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMR 236
Query: 346 TLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELH 405
EV++ VS +L V G G+ IH L++K F V N L+ MY+ G
Sbjct: 237 RFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSV 296
Query: 406 DSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACS 465
++ VF +M K+ ISWNS++A+F G AL M G + VTF S L AC
Sbjct: 297 EANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACF 356
Query: 466 HAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVW 525
EKG L + L +V M G+ G + E++ + +P R V+ W
Sbjct: 357 TPDFFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPR-RDVVAW 414
Query: 526 QALLGA 531
AL+G
Sbjct: 415 NALIGG 420
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 378 bits (970), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/600 (36%), Positives = 326/600 (54%), Gaps = 12/600 (2%)
Query: 38 NHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGE 97
N +LSVC + LG +H ++ F+ S + NSLLSMYSKCG
Sbjct: 238 NAVTFDCVLSVCASKLLIDLGVQLHGLVVVSG--VDFEGS------IKNSLLSMYSKCGR 289
Query: 98 LQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTM 157
DA KLF M DTV+WN MISG++++ + FF +M S + D T +++
Sbjct: 290 FDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLP---DAITFSSL 346
Query: 158 LSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNV 217
L + E + IH + +I + +ALI +YFKC + +F + +V
Sbjct: 347 LPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDV 406
Query: 218 VTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGL 277
V +TA+ISG N LY D L +F + +SPN +T +S L + AL GR++HG
Sbjct: 407 VVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGF 466
Query: 278 LWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEA 337
+ K G + I A++D+Y+KCG + A++IFE + D VS ++ AQ+ A
Sbjct: 467 IIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAA 526
Query: 338 IQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINM 397
I IF ++ GI D +SA L S GK IH +IK + + + + + LI+M
Sbjct: 527 IDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDM 586
Query: 398 YSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEM-RVGGIAPTDVT 456
Y+KCG L ++ VF M +KN +SWNS+IAA HG +L + EM GI P +T
Sbjct: 587 YAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQIT 646
Query: 457 FLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGL 516
FL ++ +C H G V++G+ F SMT D+ + P+ EHYACVVD+ GRAG L EA ++ +
Sbjct: 647 FLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSM 706
Query: 517 PENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERA 576
P VW LLGAC +H + E+ + A+ +L+ P++S +VL++N ++ +W+
Sbjct: 707 PFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVT 766
Query: 577 GAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDEGYVP 636
MKE+ V K G SWIEI+K+ FV GD HP++ I+ L+ LL L+ EGY+P
Sbjct: 767 KVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGYIP 826
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 142/489 (29%), Positives = 246/489 (50%), Gaps = 16/489 (3%)
Query: 83 FVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSES 142
FV +SL+ Y + G++ KLFDR+ +D V WN M++G+ + D+ + F M
Sbjct: 174 FVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVM--- 230
Query: 143 RTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCF 202
R + T +LS C + +HGLV V G + E ++ N+L++ Y KCG F
Sbjct: 231 RMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRF 290
Query: 203 CQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMAC 262
++F M + VTW +ISG Q+ L E+ L F +M V P+ +T+ S L +
Sbjct: 291 DDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSV 350
Query: 263 SGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLT 322
S + L ++IH + + + D+ + SAL+D Y KC + A IF +D V T
Sbjct: 351 SKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFT 410
Query: 323 VILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKK 382
++ + NG +++++F +V + I + + ++L V G+ +L LG+++H IIKK
Sbjct: 411 AMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKK 470
Query: 383 NFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFY 442
F + +I+MY+KCG ++ + ++F +++++ +SWNS+I A+ + S A+ +
Sbjct: 471 GFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIF 530
Query: 443 EEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGR 502
+M V GI V+ + L AC++ G M + H L+ + ++DM +
Sbjct: 531 RQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIK-HSLASDVYSESTLIDMYAK 589
Query: 503 AGLLKEAKNFIEGLPENRGVLVWQALLGACSIHG---DS--------EMGKFAADQLILA 551
G LK A N + + E + ++ W +++ AC HG DS E DQ+
Sbjct: 590 CGNLKAAMNVFKTMKE-KNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFL 648
Query: 552 APASSAPHV 560
SS HV
Sbjct: 649 EIISSCCHV 657
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/498 (24%), Positives = 239/498 (47%), Gaps = 23/498 (4%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDA 101
LS LL C L G +HA +I S DS + +L MY+ CG D
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNS--ISGDS------YTDERILGMYAMCGSFSDC 89
Query: 102 IKLFDRMPVRDTV--SWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLS 159
K+F R+ +R + WNS+IS F+RN + F+ +M D +T ++
Sbjct: 90 GKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKM---LCFGVSPDVSTFPCLVK 146
Query: 160 ACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVT 219
AC + + V G + V ++LI +Y + G ++FD +++++ V
Sbjct: 147 ACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVI 206
Query: 220 WTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLW 279
W +++G A+ + ++ F+ MR +SPN +T+ L C+ + G ++HGL+
Sbjct: 207 WNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVV 266
Query: 280 KLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQ 339
G+ + I+++L+ +YSKCG + A ++F D V+ ++ + Q+G EE++
Sbjct: 267 VSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLT 326
Query: 340 IFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYS 399
F +++ G+ DA S++L +L KQIH I++ + S + F+++ LI+ Y
Sbjct: 327 FFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYF 386
Query: 400 KCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLS 459
KC + + +F + + + + ++I+ + +G +L+ + + I+P ++T +S
Sbjct: 387 KCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVS 446
Query: 460 LLHACSHAGLVEKGME---FLVSMTRDHRLSPRSEHYAC-VVDMLGRAGLLKEAKNFIEG 515
+L ++ G E F++ D+R + C V+DM + G + A E
Sbjct: 447 ILPVIGILLALKLGRELHGFIIKKGFDNRC-----NIGCAVIDMYAKCGRMNLAYEIFER 501
Query: 516 LPENRGVLVWQALLGACS 533
L + R ++ W +++ C+
Sbjct: 502 LSK-RDIVSWNSMITRCA 518
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 153/325 (47%), Gaps = 6/325 (1%)
Query: 147 SRFDKAT----LTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCF 202
SRF + T L+ +L AC P + +H + V + ++ Y CG F
Sbjct: 27 SRFLEETIPRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSF 86
Query: 203 CQGRQVFDEMIER--NVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLM 260
++F + R ++ W ++IS +N L L + +M VSP+ T+ +
Sbjct: 87 SDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVK 146
Query: 261 ACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVS 320
AC ++ + + LGM + + S+L+ Y + G ++ ++F+ + D V
Sbjct: 147 ACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVI 206
Query: 321 LTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLII 380
V+L +A+ G + I+ F+ + I +A VL V + LG Q+H L++
Sbjct: 207 WNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVV 266
Query: 381 KKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQ 440
+ N L++MYSKCG D+ ++F M++ ++++WN +I+ + + G +L
Sbjct: 267 VSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLT 326
Query: 441 FYEEMRVGGIAPTDVTFLSLLHACS 465
F+ EM G+ P +TF SLL + S
Sbjct: 327 FFYEMISSGVLPDAITFSSLLPSVS 351
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 111/234 (47%), Gaps = 14/234 (5%)
Query: 250 PNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQI 309
P L+ L L ACS L +G+++H L + D + ++ +Y+ CGS ++
Sbjct: 35 PRRLSLL--LQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKM 92
Query: 310 FESAEELDGVSL---TVILVAFAQNGFEEEAIQIFTRIVTLGIEVDAN----MVSAVLGV 362
F + L S+ I+ +F +NG +A+ + +++ G+ D + +V A + +
Sbjct: 93 FYRLD-LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVAL 151
Query: 363 FGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISW 422
L + SL N FV++ LI Y + G++ ++F + QK+ + W
Sbjct: 152 KNFKGIDFLSDTVSSL----GMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIW 207
Query: 423 NSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEF 476
N ++ +A+ G ++ + MR+ I+P VTF +L C+ L++ G++
Sbjct: 208 NVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQL 261
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 377 bits (969), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/616 (34%), Positives = 333/616 (54%), Gaps = 16/616 (2%)
Query: 41 HLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQD 100
+L S+L VC R G G +H ++K + +S N L+ MY KC E
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITS--------NYLIDMYCKCREPLM 59
Query: 101 AIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSA 160
A K+FD MP R+ VSW++++SG + N D F +M + F T +T L A
Sbjct: 60 AYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEF---TFSTNLKA 116
Query: 161 CDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTW 220
C IHG GFE + VGN+L+ Y KCG + +VF +++R++++W
Sbjct: 117 CGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISW 176
Query: 221 TAVISGLAQNELYEDGLRLFAQMRGGSVS--PNTLTYLSSLMACSGVQALAEGRKIHGLL 278
A+I+G L F M+ ++ P+ T S L ACS + G++IHG L
Sbjct: 177 NAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFL 236
Query: 279 WKLGMQ--SDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEE 336
+ G S I +L+DLY KCG L A + F+ +E +S + +++ +AQ G E
Sbjct: 237 VRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVE 296
Query: 337 AIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLIN 396
A+ +F R+ L ++D+ +S+++GVF L GKQ+ +L +K V N +++
Sbjct: 297 AMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVD 356
Query: 397 MYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVT 456
MY KCG + ++ + F EM K+ ISW VI + +HG G ++++ + EM I P +V
Sbjct: 357 MYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVC 416
Query: 457 FLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGL 516
+L++L ACSH+G++++G E + H + PR EHYACVVD+LGRAG LKEAK+ I+ +
Sbjct: 417 YLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTM 476
Query: 517 PENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERA 576
P V +WQ LL C +HGD E+GK L+ + A +V+M+N+Y G W E+
Sbjct: 477 PIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQG 536
Query: 577 GAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDE-GYV 635
A + KG+ KE G+SW+EI+++V F G+ HP +I L + L++E GYV
Sbjct: 537 NARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYV 596
Query: 636 PDKRCILYYLDQDKKD 651
+ L+ +D + K+
Sbjct: 597 YGLKHELHDIDDESKE 612
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 188/391 (48%), Gaps = 8/391 (2%)
Query: 151 KATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFD 210
+ L ++L C S +H + G + N LI Y KC +VFD
Sbjct: 6 RQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFD 65
Query: 211 EMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAE 270
M ERNVV+W+A++SG N + L LF++M + PN T+ ++L AC + AL +
Sbjct: 66 SMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEK 125
Query: 271 GRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQ 330
G +IHG K+G + + + ++L+D+YSKCG + A ++F + +S ++ F
Sbjct: 126 GLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVH 185
Query: 331 NGFEEEAIQIFTRIVTLGIE--VDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNF--SQ 386
G+ +A+ F + I+ D ++++L + GKQIH +++ F
Sbjct: 186 AGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPS 245
Query: 387 NPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMR 446
+ ++ L+++Y KCG L + + F ++ +K ISW+S+I +A+ G+ A+ ++ ++
Sbjct: 246 SATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQ 305
Query: 447 VGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLL 506
S++ + L+ +G + + ++ + VVDM + GL+
Sbjct: 306 ELNSQIDSFALSSIIGVFADFALLRQGKQ-MQALAVKLPSGLETSVLNSVVDMYLKCGLV 364
Query: 507 KEA-KNFIEGLPENRGVLVWQALLGACSIHG 536
EA K F E + + V+ W ++ HG
Sbjct: 365 DEAEKCFAE--MQLKDVISWTVVITGYGKHG 393
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 377 bits (967), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/574 (36%), Positives = 332/574 (57%), Gaps = 10/574 (1%)
Query: 84 VWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESR 143
+ N L++MY+KCG + DA ++F M +D+VSWNSMI+G +N F +K M
Sbjct: 351 IGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHD 410
Query: 144 TVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFC 203
+ F TL + LS+C +++ + + IHG G + ++V NAL+T Y + G
Sbjct: 411 ILPGSF---TLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLN 467
Query: 204 QGRQVFDEMIERNVVTWTAVISGLAQNE--LYEDGLRLFAQMRGGSVSPNTLTYLSSLMA 261
+ R++F M E + V+W ++I LA++E L E + R G N +T+ S L A
Sbjct: 468 ECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQ-KLNRITFSSVLSA 526
Query: 262 CSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFES-AEELDGVS 320
S + G++IHGL K + + E+AL+ Y KCG ++G +IF AE D V+
Sbjct: 527 VSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVT 586
Query: 321 LTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLII 380
++ + N +A+ + ++ G +D+ M + VL F +L G ++H+ +
Sbjct: 587 WNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSV 646
Query: 381 KKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQ 440
+ + V + L++MYSKCG L +L+ F M +NS SWNS+I+ +ARHG G AL+
Sbjct: 647 RACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALK 706
Query: 441 FYEEMRVGGIAPTD-VTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDM 499
+E M++ G P D VTF+ +L ACSHAGL+E+G + SM+ + L+PR EH++C+ D+
Sbjct: 707 LFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADV 766
Query: 500 LGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHG--DSEMGKFAADQLILAAPASSA 557
LGRAG L + ++FIE +P VL+W+ +LGAC +E+GK AA+ L P ++
Sbjct: 767 LGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAV 826
Query: 558 PHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADI 617
+VL+ N+Y+A G+W++ A K+MK+ V KE G SW+ + V FV GDK HP AD+
Sbjct: 827 NYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADV 886
Query: 618 IFLELSRLLKHLKDEGYVPDKRCILYYLDQDKKD 651
I+ +L L + ++D GYVP LY L+Q+ K+
Sbjct: 887 IYKKLKELNRKMRDAGYVPQTGFALYDLEQENKE 920
Score = 186 bits (471), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 134/468 (28%), Positives = 229/468 (48%), Gaps = 18/468 (3%)
Query: 82 LFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSE 141
LFV + L+S ++K G L A K+F++M R+ V+ N ++ G +R + + + F M+
Sbjct: 243 LFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMN- 301
Query: 142 SRTVYSRFDKATLTTMLSACDGPEFS-------SVSRMIHGLVFVGGF-EREITVGNALI 193
S D + + ++ PE+S R +HG V G + + +GN L+
Sbjct: 302 -----SMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLV 356
Query: 194 TSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTL 253
Y KCG R+VF M +++ V+W ++I+GL QN + + + + MR + P +
Sbjct: 357 NMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSF 416
Query: 254 TYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESA 313
T +SSL +C+ ++ G++IHG KLG+ ++ + +ALM LY++ G L +IF S
Sbjct: 417 TLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSM 476
Query: 314 EELDGVSLTVILVAFAQNGFE-EEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLG 372
E D VS I+ A A++ EA+ F G +++ S+VL + LG
Sbjct: 477 PEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELG 536
Query: 373 KQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQ-KNSISWNSVIAAFAR 431
KQIH L +K N + N LI Y KCGE+ ++F M + +++++WNS+I+ +
Sbjct: 537 KQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIH 596
Query: 432 HGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSE 491
+ ++AL M G + ++L A + +E+GME R L
Sbjct: 597 NELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRAC-LESDVV 655
Query: 492 HYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSE 539
+ +VDM + G L A F +P R W +++ + HG E
Sbjct: 656 VGSALVDMYSKCGRLDYALRFFNTMPV-RNSYSWNSMISGYARHGQGE 702
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 133/476 (27%), Positives = 232/476 (48%), Gaps = 47/476 (9%)
Query: 82 LFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSE 141
+++ N+L++ Y + G+ A K+FD MP+R+ VSW ++SG+ RN + F + M +
Sbjct: 36 VYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVK 95
Query: 142 SRTVYSRFDKATLTTMLSACDGPEFSSV----SRMIHGLVFVGGFEREITVGNALITSYF 197
+++ ++L AC E SV R IHGL+F + + V N LI+ Y+
Sbjct: 96 EGIFSNQY---AFVSVLRACQ--EIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYW 150
Query: 198 KC-GCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYL 256
KC G F ++ +N V+W ++IS +Q R+F+ M+ P T+
Sbjct: 151 KCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFG 210
Query: 257 SSL-MACSGVQA---LAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFES 312
S + ACS + L E +I + K G+ +DL + S L+ ++K GSL A ++F
Sbjct: 211 SLVTTACSLTEPDVRLLE--QIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQ 268
Query: 313 AEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVF-----GVGT 367
E + V+L ++V + + EEA ++F + ++ I+V +L F
Sbjct: 269 METRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSM-IDVSPESYVILLSSFPEYSLAEEV 327
Query: 368 SLPLGKQIHSLIIKKNFSQNPF-VSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVI 426
L G+++H +I + NGL+NMY+KCG + D+ +VFY MT K+S+SWNS+I
Sbjct: 328 GLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMI 387
Query: 427 AAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACS-----------HAGLVEKGME 475
++G A++ Y+ MR I P T +S L +C+ H ++ G++
Sbjct: 388 TGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGID 447
Query: 476 FLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGA 531
VS++ ++ + G L E + +PE+ V W +++GA
Sbjct: 448 LNVSVSN------------ALMTLYAETGYLNECRKIFSSMPEHDQV-SWNSIIGA 490
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 139/281 (49%), Gaps = 5/281 (1%)
Query: 170 SRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQ 229
+R H ++ ++++ + N LI +Y + G R+VFDEM RN V+W ++SG ++
Sbjct: 20 ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSR 79
Query: 230 NELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACS--GVQALAEGRKIHGLLWKLGMQSDL 287
N +++ L M + N ++S L AC G + GR+IHGL++KL D
Sbjct: 80 NGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDA 139
Query: 288 CIESALMDLYSKC-GSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVT 346
+ + L+ +Y KC GS+ A F E + VS I+ ++Q G + A +IF+ +
Sbjct: 140 VVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQY 199
Query: 347 LGIEVDANMVSAVLGVFGVGT--SLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGEL 404
G +++ T + L +QI I K + FV +GL++ ++K G L
Sbjct: 200 DGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSL 259
Query: 405 HDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEM 445
+ +VF +M +N+++ N ++ R G A + + +M
Sbjct: 260 SYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM 300
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 117/214 (54%), Gaps = 6/214 (2%)
Query: 256 LSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEE 315
LS + +C G + A R H L+K + D+ + + L++ Y + G A ++F+
Sbjct: 7 LSFVQSCVGHRGAA--RFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPL 64
Query: 316 LDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDA-NMVSAVLGVFGVGT-SLPLGK 373
+ VS I+ +++NG +EA+ +V GI + VS + +G+ + G+
Sbjct: 65 RNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGR 124
Query: 374 QIHSLIIKKNFSQNPFVSNGLINMYSKC-GELHDSLQVFYEMTQKNSISWNSVIAAFARH 432
QIH L+ K +++ + VSN LI+MY KC G + +L F ++ KNS+SWNS+I+ +++
Sbjct: 125 QIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQA 184
Query: 433 GDGSRALQFYEEMRVGGIAPTDVTFLSLL-HACS 465
GD A + + M+ G PT+ TF SL+ ACS
Sbjct: 185 GDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACS 218
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 52/95 (54%)
Query: 376 HSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDG 435
HS + K ++ ++ N LIN Y + G+ + +VF EM +N +SW +++ ++R+G+
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 436 SRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLV 470
AL F +M GI F+S+L AC G V
Sbjct: 84 KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV 118
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 377 bits (967), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/617 (33%), Positives = 338/617 (54%), Gaps = 19/617 (3%)
Query: 38 NHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGE 97
N ++ L V +G G +H ++K D + + V NSL+++Y KCG
Sbjct: 193 NSFTFAAALGVLAEEGVGGRGLQVHTVVVKN----GLDKT----IPVSNSLINLYLKCGN 244
Query: 98 LQDAIKLFDRMPVRDTVSWNSMISGFLRN-RDFDAGFRFFKQMSESRTVYSRFDKATLTT 156
++ A LFD+ V+ V+WNSMISG+ N D +A F+ R Y R +++ +
Sbjct: 245 VRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSM----RLNYVRLSESSFAS 300
Query: 157 MLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEM-IER 215
++ C + + +H V GF + + AL+ +Y KC ++F E+
Sbjct: 301 VIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVG 360
Query: 216 NVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIH 275
NVV+WTA+ISG QN+ E+ + LF++M+ V PN TY L A + ++H
Sbjct: 361 NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP----SEVH 416
Query: 276 GLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEE 335
+ K + + +AL+D Y K G +E A ++F ++ D V+ + +L +AQ G E
Sbjct: 417 AQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETE 476
Query: 336 EAIQIFTRIVTLGIEVDANMVSAVLGVFG-VGTSLPLGKQIHSLIIKKNFSQNPFVSNGL 394
AI++F + GI+ + S++L V S+ GKQ H IK + VS+ L
Sbjct: 477 AAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSAL 536
Query: 395 INMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTD 454
+ MY+K G + + +VF +K+ +SWNS+I+ +A+HG +AL ++EM+ +
Sbjct: 537 LTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDG 596
Query: 455 VTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIE 514
VTF+ + AC+HAGLVE+G ++ M RD +++P EH +C+VD+ RAG L++A IE
Sbjct: 597 VTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIE 656
Query: 515 GLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKE 574
+P G +W+ +L AC +H +E+G+ AA+++I P SA +VL++N+Y+ G W+E
Sbjct: 657 NMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQE 716
Query: 575 RAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDEGY 634
RA K M E+ V KE G SWIE+ + SF+ GD+ HP D I+++L L LKD GY
Sbjct: 717 RAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGY 776
Query: 635 VPDKRCILYYLDQDKKD 651
PD +L +D + K+
Sbjct: 777 EPDTSYVLQDIDDEHKE 793
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 136/505 (26%), Positives = 249/505 (49%), Gaps = 31/505 (6%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDA 101
SS+L V + G +H + IK F F + + V SL+ Y K +D
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIK----FGF----LDDVSVGTSLVDTYMKGSNFKDG 147
Query: 102 IKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSAC 161
K+FD M R+ V+W ++ISG+ RN D F +M T + F T L
Sbjct: 148 RKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSF---TFAAALGVL 204
Query: 162 DGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWT 221
+H +V G ++ I V N+LI Y KCG + R +FD+ ++VVTW
Sbjct: 205 AEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWN 264
Query: 222 AVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKL 281
++ISG A N L + L +F MR V + ++ S + C+ ++ L ++H + K
Sbjct: 265 SMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKY 324
Query: 282 GMQSDLCIESALMDLYSKCGSLEGAWQIFESAEEL-DGVSLTVILVAFAQNGFEEEAIQI 340
G D I +ALM YSKC ++ A ++F+ + + VS T ++ F QN +EEA+ +
Sbjct: 325 GFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDL 384
Query: 341 FTRIVTLGIEVDANMVSAVLGVFGVGTSLPL--GKQIHSLIIKKNFSQNPFVSNGLINMY 398
F+ + G+ + S +L T+LP+ ++H+ ++K N+ ++ V L++ Y
Sbjct: 385 FSEMKRKGVRPNEFTYSVIL------TALPVISPSEVHAQVVKTNYERSSTVGTALLDAY 438
Query: 399 SKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFL 458
K G++ ++ +VF + K+ ++W++++A +A+ G+ A++ + E+ GGI P + TF
Sbjct: 439 VKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFS 498
Query: 459 SLLHACSHAGL-VEKGMEFLVSMTRDHRLSPRSEHYACV----VDMLGRAGLLKEAKNFI 513
S+L+ C+ + +G +F + R + CV + M + G ++ A+
Sbjct: 499 SILNVCAATNASMGQGKQF-----HGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVF 553
Query: 514 EGLPENRGVLVWQALLGACSIHGDS 538
+ E + ++ W +++ + HG +
Sbjct: 554 KRQRE-KDLVSWNSMISGYAQHGQA 577
Score = 181 bits (459), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/455 (26%), Positives = 224/455 (49%), Gaps = 34/455 (7%)
Query: 98 LQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQ-----MSESRTVYSRFDKA 152
L +A LFD+ P RD S+ S++ GF R+ R F M +++S K
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 153 TLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEM 212
+ T CD R +H GF +++VG +L+ +Y K F GR+VFDEM
Sbjct: 103 SATL----CD----ELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEM 154
Query: 213 IERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGR 272
ERNVVTWT +ISG A+N + ++ L LF +M+ PN+ T+ ++L + G
Sbjct: 155 KERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGL 214
Query: 273 KIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNG 332
++H ++ K G+ + + ++L++LY KCG++ A +F+ E V+ ++ +A NG
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANG 274
Query: 333 FEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSN 392
+ EA+ +F + + + + ++V+ + L +Q+H ++K F + +
Sbjct: 275 LDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRT 334
Query: 393 GLINMYSKCGELHDSLQVFYEM-TQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIA 451
L+ YSKC + D+L++F E+ N +SW ++I+ F ++ A+ + EM+ G+
Sbjct: 335 ALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVR 394
Query: 452 PTDVTFLSLLHACS-------HAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAG 504
P + T+ +L A HA +V+ E S ++D + G
Sbjct: 395 PNEFTYSVILTALPVISPSEVHAQVVKTNYE------------RSSTVGTALLDAYVKLG 442
Query: 505 LLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSE 539
++EA G+ +++ ++ W A+L + G++E
Sbjct: 443 KVEEAAKVFSGI-DDKDIVAWSAMLAGYAQTGETE 476
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 372 bits (956), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/579 (34%), Positives = 320/579 (55%), Gaps = 9/579 (1%)
Query: 57 LGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSW 116
+G HA ++K F ++V SL+ MY K G ++D +K+F MP R+T +W
Sbjct: 136 VGRQAHALVVKMSSF--------GDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTW 187
Query: 117 NSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGL 176
++M+SG+ + + F + S D T +LS+ + + R IH +
Sbjct: 188 STMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDY-VFTAVLSSLAATIYVGLGRQIHCI 246
Query: 177 VFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDG 236
G + + NAL+T Y KC + ++FD +RN +TW+A+++G +QN +
Sbjct: 247 TIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEA 306
Query: 237 LRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDL 296
++LF++M + P+ T + L ACS + L EG+++H L KLG + L +AL+D+
Sbjct: 307 VKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDM 366
Query: 297 YSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMV 356
Y+K G L A + F+ +E D T ++ + QN EEA+ ++ R+ T GI + +
Sbjct: 367 YAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTM 426
Query: 357 SAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQ 416
++VL +L LGKQ+H IK F + + L MYSKCG L D VF
Sbjct: 427 ASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPN 486
Query: 417 KNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEF 476
K+ +SWN++I+ + +G G AL+ +EEM G+ P DVTF++++ ACSH G VE+G +
Sbjct: 487 KDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFY 546
Query: 477 LVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHG 536
M+ L P+ +HYAC+VD+L RAG LKEAK FIE + G+ +W+ LL AC HG
Sbjct: 547 FNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHG 606
Query: 537 DSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWI 596
E+G +A ++L+ S+ +V ++ IY+A G+ ++ K M+ GV+KEVG SWI
Sbjct: 607 KCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWI 666
Query: 597 EIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDEGYV 635
E+ Q FVVGD +HP + + + + + +EG+V
Sbjct: 667 ELKNQYHVFVVGDTMHPMIEETKDLVCLVSRQMIEEGFV 705
Score = 215 bits (548), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 153/546 (28%), Positives = 266/546 (48%), Gaps = 22/546 (4%)
Query: 30 PATSESVLNHAHLSSLLSVC---GRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWN 86
P+T ++ LN H S+LL + NL G ++H +II+ + N
Sbjct: 3 PSTFQTELN-PHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHA--------N 53
Query: 87 SLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVY 146
L++ Y+KCG+L A +F+ + +D VSWNS+I+G+ +N + + + E R
Sbjct: 54 VLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQD 113
Query: 147 SRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGR 206
+ TL + A + S+V R H LV +I V +L+ Y K G G
Sbjct: 114 ILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGL 173
Query: 207 QVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFA----QMRGGSVSPNTLTYLSSLMAC 262
+VF M ERN TW+ ++SG A E+ +++F + GS S T + S +A
Sbjct: 174 KVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAA 233
Query: 263 SGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLT 322
+ L GR+IH + K G+ + + +AL+ +YSKC SL A ++F+S+ + + ++ +
Sbjct: 234 TIYVGL--GRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWS 291
Query: 323 VILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKK 382
++ ++QNG EA+++F+R+ + GI+ + VL L GKQ+HS ++K
Sbjct: 292 AMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKL 351
Query: 383 NFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFY 442
F ++ F + L++MY+K G L D+ + F + +++ W S+I+ + ++ D AL Y
Sbjct: 352 GFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILY 411
Query: 443 EEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGR 502
M+ GI P D T S+L ACS +E G + + T H + + M +
Sbjct: 412 RRMKTAGIIPNDPTMASVLKACSSLATLELGKQ-VHGHTIKHGFGLEVPIGSALSTMYSK 470
Query: 503 AGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLM 562
G L++ P N+ V+ W A++ S +G + ++++ A V
Sbjct: 471 CGSLEDGNLVFRRTP-NKDVVSWNAMISGLSHNGQGDEALELFEEML--AEGMEPDDVTF 527
Query: 563 ANIYSA 568
NI SA
Sbjct: 528 VNIISA 533
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 216/601 (35%), Positives = 340/601 (56%), Gaps = 18/601 (2%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDA 101
+SLLS C +L +GS H+ IIK+ LFV N+L+ MY+KCG L+DA
Sbjct: 431 FTSLLSTCAASHDLEMGSQFHSIIIKKKL--------AKNLFVGNALVDMYAKCGALEDA 482
Query: 102 IKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSAC 161
++F+RM RD V+WN++I ++++ + F FK+M+ V D A L + L AC
Sbjct: 483 RQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVS---DGACLASTLKAC 539
Query: 162 DGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWT 221
+ +H L G +R++ G++LI Y KCG R+VF + E +VV+
Sbjct: 540 THVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMN 599
Query: 222 AVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKL 281
A+I+G +QN L E+ + LF +M V+P+ +T+ + + AC ++L G + HG + K
Sbjct: 600 ALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKR 658
Query: 282 GMQSD-LCIESALMDLYSKCGSLEGAWQIFESAEELDGVSL-TVILVAFAQNGFEEEAIQ 339
G S+ + +L+ +Y + A +F + L T ++ +QNGF EEA++
Sbjct: 659 GFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALK 718
Query: 340 IFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYS 399
+ + G+ D VL V V +SL G+ IHSLI + SN LI+MY+
Sbjct: 719 FYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYA 778
Query: 400 KCGELHDSLQVFYEMTQK-NSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFL 458
KCG++ S QVF EM ++ N +SWNS+I +A++G AL+ ++ MR I P ++TFL
Sbjct: 779 KCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFL 838
Query: 459 SLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPE 518
+L ACSHAG V G + M + + R +H AC+VD+LGR G L+EA +FIE
Sbjct: 839 GVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNL 898
Query: 519 NRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGA 578
+W +LLGAC IHGD G+ +A++LI P +S+ +VL++NIY+++G W E+A A
Sbjct: 899 KPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCW-EKANA 957
Query: 579 IKR-MKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDEGYV-P 636
+++ M+++GV K G SWI+++++ F GDK H + I + L L +KD+ V P
Sbjct: 958 LRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLMKDDAVVNP 1017
Query: 637 D 637
D
Sbjct: 1018 D 1018
Score = 206 bits (524), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 137/484 (28%), Positives = 227/484 (46%), Gaps = 53/484 (10%)
Query: 38 NHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGE 97
N S +LS C R+ N+ G IH +IK RN+ + +L+ MY+KC
Sbjct: 159 NKFTFSIVLSTCARETNVEFGRQIHCSMIKM-------GLERNS-YCGGALVDMYAKCDR 210
Query: 98 LQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTM 157
+ DA ++F+ + +TV W + SG+++ AG E+ V+ R M
Sbjct: 211 ISDARRVFEWIVDPNTVCWTCLFSGYVK-----AGLP-----EEAVLVFER--------M 252
Query: 158 LSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNV 217
P+ L FV +I +Y + G R +F EM +V
Sbjct: 253 RDEGHRPDH---------LAFV-----------TVINTYIRLGKLKDARLLFGEMSSPDV 292
Query: 218 VTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGL 277
V W +ISG + + F MR SV T S L A V L G +H
Sbjct: 293 VAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAE 352
Query: 278 LWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEA 337
KLG+ S++ + S+L+ +YSKC +E A ++FE+ EE + V ++ +A NG +
Sbjct: 353 AIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKV 412
Query: 338 IQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINM 397
+++F + + G +D +++L L +G Q HS+IIKK ++N FV N L++M
Sbjct: 413 MELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDM 472
Query: 398 YSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTF 457
Y+KCG L D+ Q+F M +++++WN++I ++ + + S A ++ M + GI
Sbjct: 473 YAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACL 532
Query: 458 LSLLHACSHAGLVEKGME---FLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIE 514
S L AC+H + +G + V D L S ++DM + G++K+A+
Sbjct: 533 ASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSS----LIDMYSKCGIIKDARKVFS 588
Query: 515 GLPE 518
LPE
Sbjct: 589 SLPE 592
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 129/463 (27%), Positives = 231/463 (49%), Gaps = 6/463 (1%)
Query: 75 DSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFR 134
D R + ++++ Y + G+L+DA LF M D V+WN MISG +
Sbjct: 254 DEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIE 313
Query: 135 FFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALIT 194
+F M +S +R +TL ++LSA + ++H G I VG++L++
Sbjct: 314 YFFNMRKSSVKSTR---STLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVS 370
Query: 195 SYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLT 254
Y KC +VF+ + E+N V W A+I G A N + LF M+ + + T
Sbjct: 371 MYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFT 430
Query: 255 YLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAE 314
+ S L C+ L G + H ++ K + +L + +AL+D+Y+KCG+LE A QIFE
Sbjct: 431 FTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMC 490
Query: 315 ELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQ 374
+ D V+ I+ ++ Q+ E EA +F R+ GI D +++ L L GKQ
Sbjct: 491 DRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQ 550
Query: 375 IHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGD 434
+H L +K ++ + LI+MYSKCG + D+ +VF + + + +S N++IA ++++ +
Sbjct: 551 VHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN-N 609
Query: 435 GSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYA 494
A+ ++EM G+ P+++TF +++ AC + G +F +T+ S E+
Sbjct: 610 LEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITK-RGFSSEGEYLG 668
Query: 495 C-VVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHG 536
++ M + + EA L + +++W ++ S +G
Sbjct: 669 ISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNG 711
Score = 175 bits (444), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 119/477 (24%), Positives = 224/477 (46%), Gaps = 49/477 (10%)
Query: 55 LHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTV 114
L +G ++H++ + DS R + N+++ +Y+KC ++ A K FD + +D
Sbjct: 76 LRIGKAVHSKSL----ILGIDSEGR----LGNAIVDLYAKCAQVSYAEKQFDFLE-KDVT 126
Query: 115 SWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIH 174
+WNSM+S + R F + E++ ++F T + +LS C R IH
Sbjct: 127 AWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKF---TFSIVLSTCARETNVEFGRQIH 183
Query: 175 GLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYE 234
+ G ER G AL+ Y KC R+VF+ +++ N V WT + SG + L E
Sbjct: 184 CSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPE 243
Query: 235 DGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALM 294
+ + +F +MR P+ L +++ ++
Sbjct: 244 EAVLVFERMRDEGHRPDHLAFVT-----------------------------------VI 268
Query: 295 DLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDAN 354
+ Y + G L+ A +F D V+ V++ + G E AI+ F + ++ +
Sbjct: 269 NTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRS 328
Query: 355 MVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEM 414
+ +VL G+ +L LG +H+ IK + N +V + L++MYSKC ++ + +VF +
Sbjct: 329 TLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEAL 388
Query: 415 TQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGM 474
+KN + WN++I +A +G+ + ++ + +M+ G D TF SLL C+ + +E G
Sbjct: 389 EEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGS 448
Query: 475 EFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGA 531
+F S+ +L+ +VDM + G L++A+ E + + R + W ++G+
Sbjct: 449 QFH-SIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCD-RDNVTWNTIIGS 503
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 99/197 (50%), Gaps = 1/197 (0%)
Query: 267 ALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILV 326
AL G+ +H LG+ S+ + +A++DLY+KC + A + F+ E+ D + +L
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEK-DVTAWNSMLS 133
Query: 327 AFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQ 386
++ G + ++ F + I + S VL T++ G+QIH +IK +
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 387 NPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMR 446
N + L++MY+KC + D+ +VF + N++ W + + + + G A+ +E MR
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253
Query: 447 VGGIAPTDVTFLSLLHA 463
G P + F+++++
Sbjct: 254 DEGHRPDHLAFVTVINT 270
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 75/162 (46%), Gaps = 3/162 (1%)
Query: 368 SLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIA 427
+L +GK +HS + + N ++++Y+KC ++ + + F + +K+ +WNS+++
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQF-DFLEKDVTAWNSMLS 133
Query: 428 AFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLS 487
++ G + L+ + + I P TF +L C+ VE G + SM + L
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIK-MGLE 192
Query: 488 PRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALL 529
S +VDM + + +A+ E + + V W L
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTV-CWTCLF 233
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 368 bits (944), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/611 (33%), Positives = 331/611 (54%), Gaps = 26/611 (4%)
Query: 55 LHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTV 114
L +G +HA +++ SF + N+L++MY K G+L + L RD V
Sbjct: 218 LMMGKQVHAYGLRKGELNSF---------IINTLVAMYGKLGKLASSKVLLGSFGGRDLV 268
Query: 115 SWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIH 174
+WN+++S +N + ++M D+ T++++L AC E + +H
Sbjct: 269 TWNTVLSSLCQNEQLLEALEYLREMVLEGV---EPDEFTISSVLPACSHLEMLRTGKELH 325
Query: 175 GLVFVGG-FEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELY 233
G + VG+AL+ Y C GR+VFD M +R + W A+I+G +QNE
Sbjct: 326 AYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHD 385
Query: 234 EDGLRLFAQMR-GGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESA 292
++ L LF M + N+ T + AC A + IHG + K G+ D +++
Sbjct: 386 KEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNT 445
Query: 293 LMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVD 352
LMD+YS+ G ++ A +IF E+ D V+ ++ + + E+A+ + ++ L +V
Sbjct: 446 LMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVS 505
Query: 353 --ANMVSAVLGVFGVGTSLP---------LGKQIHSLIIKKNFSQNPFVSNGLINMYSKC 401
A+ VS + T LP GK+IH+ IK N + + V + L++MY+KC
Sbjct: 506 KGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKC 565
Query: 402 GELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLL 461
G L S +VF ++ QKN I+WN +I A+ HG+G A+ M V G+ P +VTF+S+
Sbjct: 566 GCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVF 625
Query: 462 HACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPEN-R 520
ACSH+G+V++G+ M D+ + P S+HYACVVD+LGRAG +KEA + +P +
Sbjct: 626 AACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFN 685
Query: 521 GVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIK 580
W +LLGA IH + E+G+ AA LI P ++ +VL+ANIYS+ G W + +
Sbjct: 686 KAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRR 745
Query: 581 RMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDEGYVPDKRC 640
MKE+GV KE G SWIE +V FV GD HPQ++ + L L + ++ EGYVPD C
Sbjct: 746 NMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSC 805
Query: 641 ILYYLDQDKKD 651
+L+ +++D+K+
Sbjct: 806 VLHNVEEDEKE 816
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 132/546 (24%), Positives = 252/546 (46%), Gaps = 48/546 (8%)
Query: 13 SWVDSLKSKAPISQYPFPATSESVLNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFF 72
++VD + Y FPA LL ++ LG IHA + K F
Sbjct: 84 TYVDMIVLGIKPDNYAFPA-------------LLKAVADLQDMELGKQIHAHVYK----F 126
Query: 73 SFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAG 132
+ +++ V N+L+++Y KCG+ K+FDR+ R+ VSWNS+IS ++
Sbjct: 127 GYGV---DSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 183
Query: 133 FRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNAL 192
F+ M + S F ++ T S PE + + +H G E + N L
Sbjct: 184 LEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTL 242
Query: 193 ITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNT 252
+ Y K G + + R++VTW V+S L QNE + L +M V P+
Sbjct: 243 VAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDE 302
Query: 253 LTYLSSLMACSGVQALAEGRKIHGLLWKLG-MQSDLCIESALMDLYSKCGSLEGAWQIFE 311
T S L ACS ++ L G+++H K G + + + SAL+D+Y C + ++F+
Sbjct: 303 FTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFD 362
Query: 312 SAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGV------ 365
+ ++ ++QN ++EA+ +F +G+E A +++ + GV
Sbjct: 363 GMFDRKIGLWNAMIAGYSQNEHDKEALLLF-----IGMEESAGLLANSTTMAGVVPACVR 417
Query: 366 GTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSV 425
+ + IH ++K+ ++ FV N L++MYS+ G++ ++++F +M ++ ++WN++
Sbjct: 418 SGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTM 477
Query: 426 IAAFARHGDGSRALQFYEEM------------RVGGIAPTDVTFLSLLHACSHAGLVEKG 473
I + AL +M RV + P +T +++L +C+ + KG
Sbjct: 478 ITGYVFSEHHEDALLLLHKMQNLERKVSKGASRV-SLKPNSITLMTILPSCAALSALAKG 536
Query: 474 MEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACS 533
E +++ L+ + +VDM + G L+ ++ + +P+ + V+ W ++ A
Sbjct: 537 KEIHAYAIKNN-LATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQ-KNVITWNVIIMAYG 594
Query: 534 IHGDSE 539
+HG+ +
Sbjct: 595 MHGNGQ 600
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 367 bits (943), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/569 (37%), Positives = 326/569 (57%), Gaps = 19/569 (3%)
Query: 87 SLLSMYSKCGE--LQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRT 144
SL+ M+ K GE ++A K+FD+M + V+W MI+ ++ RFF M
Sbjct: 207 SLIDMFVK-GENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDM----- 260
Query: 145 VYSRF--DKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKC--- 199
V S F DK TL+++ SAC E S+ + +H G ++ +L+ Y KC
Sbjct: 261 VLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSAD 318
Query: 200 GCFCQGRQVFDEMIERNVVTWTAVISGLAQN-ELYEDGLRLFAQM-RGGSVSPNTLTYLS 257
G R+VFD M + +V++WTA+I+G +N L + + LF++M G V PN T+ S
Sbjct: 319 GSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSS 378
Query: 258 SLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELD 317
+ AC + G+++ G +K G+ S+ + ++++ ++ K +E A + FES E +
Sbjct: 379 AFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKN 438
Query: 318 GVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVL-GVFGVGTSLPLGKQIH 376
VS L +N E+A ++ + I + V A +++L GV VG S+ G+QIH
Sbjct: 439 LVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVG-SIRKGEQIH 497
Query: 377 SLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGS 436
S ++K S N V N LI+MYSKCG + + +VF M +N ISW S+I FA+HG
Sbjct: 498 SQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAI 557
Query: 437 RALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACV 496
R L+ + +M G+ P +VT++++L ACSH GLV +G SM DH++ P+ EHYAC+
Sbjct: 558 RVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACM 617
Query: 497 VDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASS 556
VD+L RAGLL +A FI +P VLVW+ LGAC +H ++E+GK AA +++ P
Sbjct: 618 VDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEP 677
Query: 557 APHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQAD 616
A ++ ++NIY+ GKW+E ++MKE+ + KE G SWIE+ ++ F VGD HP A
Sbjct: 678 AAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAH 737
Query: 617 IIFLELSRLLKHLKDEGYVPDKRCILYYL 645
I+ EL RL+ +K GYVPD +L+ L
Sbjct: 738 QIYDELDRLITEIKRCGYVPDTDLVLHKL 766
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 144/511 (28%), Positives = 255/511 (49%), Gaps = 27/511 (5%)
Query: 37 LNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCG 96
++ SSLL C R + LG +HAR+I+ FD + L+ NSL+S+YSK G
Sbjct: 60 MDSVTFSSLLKSCIRARDFRLGKLVHARLIE------FDIEPDSVLY--NSLISLYSKSG 111
Query: 97 ELQDAIKLFD---RMPVRDTVSWNSMISGFLRN-RDFDAGFRFFKQMSESRTVYSRFDKA 152
+ A +F+ R RD VSW++M++ + N R+ DA + F + E V + +
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDA-IKVFVEFLELGLVPNDY--- 167
Query: 153 TLTTMLSACDGPEFSSVSRMIHG-LVFVGGFEREITVGNALITSYFKC-GCFCQGRQVFD 210
T ++ AC +F V R+ G L+ G FE ++ VG +LI + K F +VFD
Sbjct: 168 CYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFD 227
Query: 211 EMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAE 270
+M E NVVTWT +I+ Q + +R F M + T S AC+ ++ L+
Sbjct: 228 KMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSL 287
Query: 271 GRKIHGLLWKLGMQSDLCIESALMDLYSKC---GSLEGAWQIFESAEELDGVSLTVILVA 327
G+++H + G+ D +E +L+D+Y+KC GS++ ++F+ E+ +S T ++
Sbjct: 288 GKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITG 345
Query: 328 FAQN-GFEEEAIQIFTRIVTLG-IEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFS 385
+ +N EAI +F+ ++T G +E + S+ G + +GKQ+ K+ +
Sbjct: 346 YMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLA 405
Query: 386 QNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEM 445
N V+N +I+M+ K + D+ + F +++KN +S+N+ + R+ + +A + E+
Sbjct: 406 SNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEI 465
Query: 446 RVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGL 505
+ + TF SLL ++ G + KG E + S LS ++ M + G
Sbjct: 466 TERELGVSAFTFASLLSGVANVGSIRKG-EQIHSQVVKLGLSCNQPVCNALISMYSKCGS 524
Query: 506 LKEAKNFIEGLPENRGVLVWQALLGACSIHG 536
+ A + ENR V+ W +++ + HG
Sbjct: 525 IDTASRVFNFM-ENRNVISWTSMITGFAKHG 554
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 107/448 (23%), Positives = 204/448 (45%), Gaps = 25/448 (5%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALF--VWNSLLSMYSKC---G 96
LSS+ S C NL LG +H+ I R+ L V SL+ MY+KC G
Sbjct: 272 LSSVFSACAELENLSLGKQLHSWAI------------RSGLVDDVECSLVDMYAKCSADG 319
Query: 97 ELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDA-GFRFFKQMSESRTVYSRFDKATLT 155
+ D K+FDRM +SW ++I+G+++N + F +M V + T +
Sbjct: 320 SVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEP--NHFTFS 377
Query: 156 TMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIER 215
+ AC V + + G F G +V N++I+ + K ++ F+ + E+
Sbjct: 378 SAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEK 437
Query: 216 NVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIH 275
N+V++ + G +N +E +L +++ + + T+ S L + V ++ +G +IH
Sbjct: 438 NLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIH 497
Query: 276 GLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEE 335
+ KLG+ + + +AL+ +YSKCGS++ A ++F E + +S T ++ FA++GF
Sbjct: 498 SQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAI 557
Query: 336 EAIQIFTRIVTLGIEVDANMVSAVLGVFG-VGTSLPLGKQIHSLIIKKNFSQNPFVSNGL 394
++ F +++ G++ + A+L VG + +S+ +
Sbjct: 558 RVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACM 617
Query: 395 INMYSKCGELHDSLQVFYEMT-QKNSISWNSVIAAFARHGDGSRA-LQFYEEMRVGGIAP 452
+++ + G L D+ + M Q + + W + + A H + L + + + P
Sbjct: 618 VDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEP 677
Query: 453 TDVTFLSLLHACSHAGLVEKGMEFLVSM 480
LS ++AC AG E+ E M
Sbjct: 678 AAYIQLSNIYAC--AGKWEESTEMRRKM 703
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 111/441 (25%), Positives = 189/441 (42%), Gaps = 64/441 (14%)
Query: 38 NHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGE 97
NH SS CG + +G + + K+ + +SS V NS++SM+ K
Sbjct: 372 NHFTFSSAFKACGNLSDPRVGKQVLGQAFKRG--LASNSS------VANSVISMFVKSDR 423
Query: 98 LQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTM 157
++DA + F+ + ++ VS+N+ + G RN +F+ F+ +++E S F T ++
Sbjct: 424 MEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAF---TFASL 480
Query: 158 LSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNV 217
LS IH V G V NALI+ Y KCG +VF+ M RNV
Sbjct: 481 LSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNV 540
Query: 218 VTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEG-RKIHG 276
++WT++I+G A++ L F QM V PN +TY++ L ACS V ++EG R +
Sbjct: 541 ISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNS 600
Query: 277 LLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEE 336
+ ++ + + ++DL + G L A++
Sbjct: 601 MYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEF--------------------------- 633
Query: 337 AIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLIN 396
I T+ + D + LG V ++ LGK I++ + P L N
Sbjct: 634 -------INTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELD-PNEPAAYIQLSN 685
Query: 397 MYSKCGELHDSLQVFYEMTQKNSI-----SWNSVIAAFARH--GDGS--RALQFYEEM-- 445
+Y+ G+ +S ++ +M ++N + SW V + GD + A Q Y+E+
Sbjct: 686 IYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDR 745
Query: 446 ------RVGGIAPTDVTFLSL 460
R G + TD+ L
Sbjct: 746 LITEIKRCGYVPDTDLVLHKL 766
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 140/299 (46%), Gaps = 22/299 (7%)
Query: 244 RGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSL 303
R G +++T+ S L +C + G+ +H L + ++ D + ++L+ LYSK G
Sbjct: 54 RDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDS 113
Query: 304 EGAWQIFESAEEL---DGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVL 360
A +FE+ D VS + ++ + NG E +AI++F + LG+ + +AV+
Sbjct: 114 AKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVI 173
Query: 361 GVFGVGTSLPLGKQIHSLIIKK-NFSQNPFVSNGLINMYSKCGE--LHDSLQVFYEMTQK 417
+ +G+ ++K +F + V LI+M+ K GE ++ +VF +M++
Sbjct: 174 RACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVK-GENSFENAYKVFDKMSEL 232
Query: 418 NSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFL 477
N ++W +I + G A++F+ +M + G T S+ AC+ + G +
Sbjct: 233 NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL- 291
Query: 478 VSMTRDHRLSPRS---EHYAC-VVDMLGRA---GLLKEAKNFIEGLPENRGVLVWQALL 529
H + RS + C +VDM + G + + + + + E+ V+ W AL+
Sbjct: 292 ------HSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRM-EDHSVMSWTALI 343
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 366 bits (939), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/578 (34%), Positives = 325/578 (56%), Gaps = 14/578 (2%)
Query: 57 LGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSW 116
LG +H +IK ++V +SL+ MY+KC ++DA + F + ++VSW
Sbjct: 119 LGEQVHGLVIK--------GGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSW 170
Query: 117 NSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGL 176
N++I+GF++ RD F M V D T +L+ D P F ++ + +H
Sbjct: 171 NALIAGFVQVRDIKTAFWLLGLMEMKAAV--TMDAGTFAPLLTLLDDPMFCNLLKQVHAK 228
Query: 177 VFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMI-ERNVVTWTAVISGLAQNELYED 235
V G + EIT+ NA+I+SY CG ++VFD + +++++W ++I+G +++EL E
Sbjct: 229 VLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKES 288
Query: 236 GLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMD 295
LF QM+ V + TY L ACSG + G+ +HG++ K G++ +AL+
Sbjct: 289 AFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALIS 348
Query: 296 LYSK--CGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDA 353
+Y + G++E A +FES + D +S I+ FAQ G E+A++ F+ + + I+VD
Sbjct: 349 MYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDD 408
Query: 354 NMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYE 413
SA+L +L LG+QIH+L K F N FV + LI MYSKCG + + + F +
Sbjct: 409 YAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQ 468
Query: 414 MTQKNS-ISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEK 472
++ K+S ++WN++I +A+HG G +L + +M + VTF ++L ACSH GL+++
Sbjct: 469 ISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQE 528
Query: 473 GMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGAC 532
G+E L M +++ PR EHYA VD+LGRAGL+ +AK IE +P N +V + LG C
Sbjct: 529 GLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVC 588
Query: 533 SIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVG 592
G+ EM A+ L+ P +V ++++YS KW+E+A K MKE+GV K G
Sbjct: 589 RACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPG 648
Query: 593 VSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLK 630
SWIEI QV +F D+ +P I++ + L + ++
Sbjct: 649 WSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEMQ 686
Score = 196 bits (499), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 130/466 (27%), Positives = 225/466 (48%), Gaps = 22/466 (4%)
Query: 82 LFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSE 141
++V N +L Y K G L A LFD MP RD+VSWN+MISG+ + + F M
Sbjct: 35 IYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKR 94
Query: 142 SRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGC 201
S S D + + +L + + +HGLV GG+E + VG++L+ Y KC
Sbjct: 95 SG---SDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCER 151
Query: 202 FCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLF--------AQMRGGSVSPNTL 253
+ F E+ E N V+W A+I+G Q + L M G+ +P L
Sbjct: 152 VEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAP-LL 210
Query: 254 TYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFES- 312
T L M C+ + +++H + KLG+Q ++ I +A++ Y+ CGS+ A ++F+
Sbjct: 211 TLLDDPMFCNLL------KQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGL 264
Query: 313 AEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLG 372
D +S ++ F+++ +E A ++F ++ +E D + +L G
Sbjct: 265 GGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFG 324
Query: 373 KQIHSLIIKKNFSQNPFVSNGLINMYSK--CGELHDSLQVFYEMTQKNSISWNSVIAAFA 430
K +H ++IKK Q +N LI+MY + G + D+L +F + K+ ISWNS+I FA
Sbjct: 325 KSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFA 384
Query: 431 RHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRS 490
+ G A++F+ +R I D F +LL +CS ++ G + T+ +S
Sbjct: 385 QKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEF 444
Query: 491 EHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHG 536
+ +V M + G+++ A+ + + + W A++ + HG
Sbjct: 445 VISSLIV-MYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHG 489
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 156/324 (48%), Gaps = 13/324 (4%)
Query: 172 MIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNE 231
+ H G +I V N ++ SY K G +FDEM +R+ V+W +ISG
Sbjct: 21 LTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCG 80
Query: 232 LYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIES 291
ED LF M+ + ++ L + V+ G ++HGL+ K G + ++ + S
Sbjct: 81 KLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGS 140
Query: 292 ALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRI-VTLGIE 350
+L+D+Y+KC +E A++ F+ E + VS ++ F Q + A + + + +
Sbjct: 141 SLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVT 200
Query: 351 VDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQV 410
+DA + +L + L KQ+H+ ++K + N +I+ Y+ CG + D+ +V
Sbjct: 201 MDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRV 260
Query: 411 FYEM-TQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACS---- 465
F + K+ ISWNS+IA F++H A + + +M+ + T+ LL ACS
Sbjct: 261 FDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEH 320
Query: 466 -------HAGLVEKGMEFLVSMTR 482
H +++KG+E + S T
Sbjct: 321 QIFGKSLHGMVIKKGLEQVTSATN 344
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 134/274 (48%), Gaps = 15/274 (5%)
Query: 43 SSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSK--CGELQD 100
+ LLS C + + G S+H +IK+ N+L+SMY + G ++D
Sbjct: 309 TGLLSACSGEEHQIFGKSLHGMVIKK--------GLEQVTSATNALISMYIQFPTGTMED 360
Query: 101 AIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSA 160
A+ LF+ + +D +SWNS+I+GF + + +FF + S + D + +L +
Sbjct: 361 ALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEI---KVDDYAFSALLRS 417
Query: 161 CDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERN-VVT 219
C + + IH L GF V ++LI Y KCG R+ F ++ ++ V
Sbjct: 418 CSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVA 477
Query: 220 WTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLW 279
W A+I G AQ+ L + L LF+QM +V + +T+ + L ACS + EG ++ L+
Sbjct: 478 WNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLME 537
Query: 280 KL-GMQSDLCIESALMDLYSKCGSLEGAWQIFES 312
+ +Q + +A +DL + G + A ++ ES
Sbjct: 538 PVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIES 571
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 129/274 (47%), Gaps = 26/274 (9%)
Query: 275 HGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFE 334
H K G SD+ + + ++D Y K G L A +F+ + D VS ++ + G
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 335 EEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGL 394
E+A +FT + G +VD S +L LG+Q+H L+IK + N +V + L
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 395 INMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGD--------GSRALQFYEEMR 446
++MY+KC + D+ + F E+++ NS+SWN++IA F + D G ++ M
Sbjct: 143 VDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMD 202
Query: 447 VGGIAP-----TDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLG 501
G AP D F +LL HA +++ G++ +++ ++
Sbjct: 203 AGTFAPLLTLLDDPMFCNLLKQV-HAKVLKLGLQHEITICN------------AMISSYA 249
Query: 502 RAGLLKEAKNFIEGLPENRGVLVWQALLGACSIH 535
G + +AK +GL ++ ++ W +++ S H
Sbjct: 250 DCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKH 283
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 364 bits (935), Expect = e-101, Method: Compositional matrix adjust.
Identities = 214/654 (32%), Positives = 334/654 (51%), Gaps = 57/654 (8%)
Query: 45 LLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKL 104
+ CG ++ G S HA S + + +FV N+L++MYS+C L DA K+
Sbjct: 133 VFKACGEISSVRCGESAHA--------LSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 105 FDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGP 164
FD M V D VSWNS+I + + F +M+ R D TL +L C
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNE--FGCRPDNITLVNVLPPCASL 242
Query: 165 EFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVI 224
S+ + +H + + VGN L+ Y KCG + VF M ++VV+W A++
Sbjct: 243 GTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMV 302
Query: 225 SGLAQNELYEDGLRLFA-----------------------------------QMRGGSVS 249
+G +Q +ED +RLF QM +
Sbjct: 303 AGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIK 362
Query: 250 PNTLTYLSSLMACSGVQALAEGRKIHGL-------LWKLGMQSDLCIESALMDLYSKCGS 302
PN +T +S L C+ V AL G++IH L K G + + + L+D+Y+KC
Sbjct: 363 PNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKK 422
Query: 303 LEGAWQIFES--AEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDAN--MVSA 358
++ A +F+S +E D V+ TV++ ++Q+G +A+++ + + + N +S
Sbjct: 423 VDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISC 482
Query: 359 VLGVFGVGTSLPLGKQIHSLIIKKNFSQNP-FVSNGLINMYSKCGELHDSLQVFYEMTQK 417
L +L +GKQIH+ ++ + P FVSN LI+MY+KCG + D+ VF M K
Sbjct: 483 ALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAK 542
Query: 418 NSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFL 477
N ++W S++ + HG G AL ++EMR G VT L +L+ACSH+G++++GME+
Sbjct: 543 NEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYF 602
Query: 478 VSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGD 537
M +SP EHYAC+VD+LGRAG L A IE +P +VW A L C IHG
Sbjct: 603 NRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGK 662
Query: 538 SEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIE 597
E+G++AA+++ A + L++N+Y+ G+WK+ M+ KGV K G SW+E
Sbjct: 663 VELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVE 722
Query: 598 IDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDEGYVPDKRCILYYLDQDKKD 651
K ++F VGDK HP A I+ L ++ +KD GYVP+ L+ +D ++KD
Sbjct: 723 GIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKD 776
Score = 152 bits (383), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 125/504 (24%), Positives = 221/504 (43%), Gaps = 59/504 (11%)
Query: 88 LLSMYSKCGELQDAIKLFDRMPVRD--TVSWNSMISGFLRNRDFDAGFRFFKQMSESRTV 145
L+S Y G L A+ L R P D WNS+I + N + F M ++
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLM---HSL 121
Query: 146 YSRFDKATLTTMLSACDGPEFSSV--SRMIHGLVFVGGFEREITVGNALITSYFKCGCFC 203
D T + AC E SSV H L V GF + VGNAL+ Y +C
Sbjct: 122 SWTPDNYTFPFVFKACG--EISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLS 179
Query: 204 QGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGG-SVSPNTLTYLSSLMAC 262
R+VFDEM +VV+W ++I A+ + L +F++M P+ +T ++ L C
Sbjct: 180 DARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPC 239
Query: 263 SGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLT 322
+ + + G+++H M ++ + + L+D+Y+KCG ++ A +F + D VS
Sbjct: 240 ASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWN 299
Query: 323 VILVAFAQNGFEEEAIQIFTRIVTLGIEVD------------------------------ 352
++ ++Q G E+A+++F ++ I++D
Sbjct: 300 AMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSS 359
Query: 353 ------ANMVSAVLGVFGVGTSLPLGKQIHSLIIK------KN-FSQNPFVSNGLINMYS 399
++S + G VG +L GK+IH IK KN V N LI+MY+
Sbjct: 360 GIKPNEVTLISVLSGCASVG-ALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYA 418
Query: 400 KCGELHDSLQVFYEMT--QKNSISWNSVIAAFARHGDGSRALQFYEEM--RVGGIAPTDV 455
KC ++ + +F ++ +++ ++W +I +++HGD ++AL+ EM P
Sbjct: 419 KCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAF 478
Query: 456 TFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEG 515
T L AC+ + G + R+ + + C++DM + G + +A+ +
Sbjct: 479 TISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDN 538
Query: 516 LPENRGVLVWQALLGACSIHGDSE 539
+ V W +L+ +HG E
Sbjct: 539 MMAKNEV-TWTSLMTGYGMHGYGE 561
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/446 (26%), Positives = 202/446 (45%), Gaps = 70/446 (15%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDA 101
L ++L C G LG +H F+ S +FV N L+ MY+KCG + +A
Sbjct: 232 LVNVLPPCASLGTHSLGKQLHC--------FAVTSEMIQNMFVGNCLVDMYAKCGMMDEA 283
Query: 102 IKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYS-------------- 147
+F M V+D VSWN+M++G+ + F+ R F++M E +
Sbjct: 284 NTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQR 343
Query: 148 ------------------RFDKATLTTMLSACDGPEFSSVSRMIHGL------------V 177
+ ++ TL ++LS C +SV ++HG +
Sbjct: 344 GLGYEALGVCRQMLSSGIKPNEVTLISVLSGC-----ASVGALMHGKEIHCYAIKYPIDL 398
Query: 178 FVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMI--ERNVVTWTAVISGLAQNELYED 235
G E V N LI Y KC R +FD + ER+VVTWT +I G +Q+
Sbjct: 399 RKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANK 458
Query: 236 GLRLFAQM--RGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSD---LCIE 290
L L ++M PN T +L+AC+ + AL G++IH + L Q + L +
Sbjct: 459 ALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHA--YALRNQQNAVPLFVS 516
Query: 291 SALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIE 350
+ L+D+Y+KCGS+ A +F++ + V+ T ++ + +G+ EEA+ IF + +G +
Sbjct: 517 NCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFK 576
Query: 351 VDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSN--GLINMYSKCGELHDSL 408
+D + VL + G + + +K F +P + L+++ + G L+ +L
Sbjct: 577 LDGVTLLVVLYACSHSGMIDQGMEYFNR-MKTVFGVSPGPEHYACLVDLLGRAGRLNAAL 635
Query: 409 QVFYEMT-QKNSISWNSVIAAFARHG 433
++ EM + + W + ++ HG
Sbjct: 636 RLIEEMPMEPPPVVWVAFLSCCRIHG 661
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 132/295 (44%), Gaps = 9/295 (3%)
Query: 38 NHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGE 97
N L S+LS C G L G IH IK P + + V N L+ MY+KC +
Sbjct: 364 NEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLR-KNGHGDENMVINQLIDMYAKCKK 422
Query: 98 LQDAIKLFDRMPV--RDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLT 155
+ A +FD + RD V+W MI G+ ++ D + +M E +R + T++
Sbjct: 423 VDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFE-EDCQTRPNAFTIS 481
Query: 156 TMLSACDGPEFSSVSRMIHGLVFVGGFER-EITVGNALITSYFKCGCFCQGRQVFDEMIE 214
L AC + + IH + V N LI Y KCG R VFD M+
Sbjct: 482 CALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMA 541
Query: 215 RNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKI 274
+N VTWT++++G + E+ L +F +MR + +T L L ACS + +G +
Sbjct: 542 KNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEY 601
Query: 275 HGLLWKL-GMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAF 328
+ + G+ + L+DL + G L A ++ EE+ V+ VAF
Sbjct: 602 FNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLI---EEMPMEPPPVVWVAF 653
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 130/287 (45%), Gaps = 23/287 (8%)
Query: 266 QALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDG--VSLTV 323
+ +++ + IH L G+ + L + S L+ Y G L A + D
Sbjct: 39 KTISQVKLIHQKLLSFGILT-LNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNS 97
Query: 324 ILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKN 383
++ ++ NG + + +F + +L D V G +S+ G+ H+L +
Sbjct: 98 LIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTG 157
Query: 384 FSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYE 443
F N FV N L+ MYS+C L D+ +VF EM+ + +SWNS+I ++A+ G AL+ +
Sbjct: 158 FISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFS 217
Query: 444 EMRVG-GIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYA------CV 496
M G P ++T +++L C+ G G + H + SE C+
Sbjct: 218 RMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQL-------HCFAVTSEMIQNMFVGNCL 270
Query: 497 VDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKF 543
VDM + G++ EA + + V+ W A++ G S++G+F
Sbjct: 271 VDMYAKCGMMDEANTVFSNM-SVKDVVSWNAMVA-----GYSQIGRF 311
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 362 bits (929), Expect = e-100, Method: Compositional matrix adjust.
Identities = 205/620 (33%), Positives = 335/620 (54%), Gaps = 25/620 (4%)
Query: 18 LKSKAPISQYPFPATSESVLNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSS 77
+ S + Y F S+S SSL SV H G +H I+K
Sbjct: 187 MSSGVEMDSYTFSCVSKS------FSSLRSV-------HGGEQLHGFILKSG------FG 227
Query: 78 RRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFK 137
RN+ V NSL++ Y K + A K+FD M RD +SWNS+I+G++ N + G F
Sbjct: 228 ERNS--VGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFV 285
Query: 138 QMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYF 197
QM S D AT+ ++ + C S+ R +H + F RE N L+ Y
Sbjct: 286 QMLVSGI---EIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYS 342
Query: 198 KCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLS 257
KCG + VF EM +R+VV++T++I+G A+ L + ++LF +M +SP+ T +
Sbjct: 343 KCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTA 402
Query: 258 SLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELD 317
L C+ + L EG+++H + + + D+ + +ALMD+Y+KCGS++ A +F D
Sbjct: 403 VLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKD 462
Query: 318 GVSLTVILVAFAQNGFEEEAIQIFTRIVTLG-IEVDANMVSAVLGVFGVGTSLPLGKQIH 376
+S I+ +++N + EA+ +F ++ D V+ VL ++ G++IH
Sbjct: 463 IISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIH 522
Query: 377 SLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGS 436
I++ + + V+N L++MY+KCG L + +F ++ K+ +SW +IA + HG G
Sbjct: 523 GYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGK 582
Query: 437 RALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACV 496
A+ + +MR GI +++F+SLL+ACSH+GLV++G F M + ++ P EHYAC+
Sbjct: 583 EAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACI 642
Query: 497 VDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASS 556
VDML R G L +A FIE +P +W ALL C IH D ++ + A+++ P ++
Sbjct: 643 VDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENT 702
Query: 557 APHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQAD 616
+VLMANIY+ KW++ KR+ ++G+ K G SWIEI +V+ FV GD +P+ +
Sbjct: 703 GYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETE 762
Query: 617 IIFLELSRLLKHLKDEGYVP 636
I L ++ + +EGY P
Sbjct: 763 NIEAFLRKVRARMIEEGYSP 782
Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 147/505 (29%), Positives = 249/505 (49%), Gaps = 32/505 (6%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDA 101
L S+L +C +L G + I + F DS+ + + L MY+ CG+L++A
Sbjct: 97 LCSVLQLCADSKSLKDGKEVDNFI--RGNGFVIDSN------LGSKLSLMYTNCGDLKEA 148
Query: 102 IKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSAC 161
++FD + + + WN +++ ++ DF FK+M S D T + C
Sbjct: 149 SRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGV---EMDSYTFS-----C 200
Query: 162 DGPEFSSVSRM-----IHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERN 216
FSS+ + +HG + GF +VGN+L+ Y K R+VFDEM ER+
Sbjct: 201 VSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERD 260
Query: 217 VVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHG 276
V++W ++I+G N L E GL +F QM + + T +S C+ + ++ GR +H
Sbjct: 261 VISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHS 320
Query: 277 LLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEE 336
+ K + + L+D+YSKCG L+ A +F + VS T ++ +A+ G E
Sbjct: 321 IGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGE 380
Query: 337 AIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLIN 396
A+++F + GI D V+AVL L GK++H I + + + FVSN L++
Sbjct: 381 AVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMD 440
Query: 397 MYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFY----EEMRVGGIAP 452
MY+KCG + ++ VF EM K+ ISWN++I ++++ + AL + EE R +P
Sbjct: 441 MYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKR---FSP 497
Query: 453 TDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYA-CVVDMLGRAGLLKEAKN 511
+ T +L AC+ +KG E + R+ S R H A +VDM + G L A
Sbjct: 498 DERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDR--HVANSLVDMYAKCGALLLAHM 555
Query: 512 FIEGLPENRGVLVWQALLGACSIHG 536
+ + ++ ++ W ++ +HG
Sbjct: 556 LFDDIA-SKDLVSWTVMIAGYGMHG 579
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 193/384 (50%), Gaps = 2/384 (0%)
Query: 150 DKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVF 209
D TL ++L C + + + + GF + +G+ L Y CG + +VF
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 210 DEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALA 269
DE+ + W +++ LA++ + + LF +M V ++ T+ + S ++++
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 270 EGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFA 329
G ++HG + K G + ++L+ Y K ++ A ++F+ E D +S I+ +
Sbjct: 213 GGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 330 QNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPF 389
NG E+ + +F +++ GIE+D + +V + LG+ +HS+ +K FS+
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 332
Query: 390 VSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGG 449
N L++MYSKCG+L + VF EM+ ++ +S+ S+IA +AR G A++ +EEM G
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 450 IAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEA 509
I+P T ++L+ C+ L+++G + +++ L ++DM + G ++EA
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKR-VHEWIKENDLGFDIFVSNALMDMYAKCGSMQEA 451
Query: 510 KNFIEGLPENRGVLVWQALLGACS 533
+ + + ++ W ++G S
Sbjct: 452 ELVFSEM-RVKDIISWNTIIGGYS 474
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 69/133 (51%), Gaps = 2/133 (1%)
Query: 325 LVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNF 384
L F ++G E A+++ V+ ++D + +VL + SL GK++ + I F
Sbjct: 68 LRRFCESGNLENAVKLLC--VSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGF 125
Query: 385 SQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEE 444
+ + + L MY+ CG+L ++ +VF E+ + ++ WN ++ A+ GD S ++ +++
Sbjct: 126 VIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKK 185
Query: 445 MRVGGIAPTDVTF 457
M G+ TF
Sbjct: 186 MMSSGVEMDSYTF 198
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 362 bits (928), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/597 (32%), Positives = 326/597 (54%), Gaps = 41/597 (6%)
Query: 74 FDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGF 133
FD + ++ WNS+++ +K G L +A LF MP RD +WNSM+SGF ++ +
Sbjct: 78 FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL 137
Query: 134 RFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALI 193
+F M + V + + + ++LSAC G + +H L+ F ++ +G+AL+
Sbjct: 138 CYFAMMHKEGFVLNEY---SFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALV 194
Query: 194 TSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTL 253
Y KCG ++VFDEM +RNVV+W ++I+ QN + L +F M V P+ +
Sbjct: 195 DMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEV 254
Query: 254 TYLSSLMACSGVQALAEGRKIHGLLWKLG-MQSDLCIESALMDLYSKCGSLEGAWQIFES 312
T S + AC+ + A+ G+++HG + K +++D+ + +A +D+Y+KC ++ A IF+S
Sbjct: 255 TLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDS 314
Query: 313 -------AE------------------------ELDGVSLTVILVAFAQNGFEEEAIQIF 341
AE E + VS ++ + QNG EEA+ +F
Sbjct: 315 MPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLF 374
Query: 342 TRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNF------SQNPFVSNGLI 395
+ + + +L L LG Q H ++K F + FV N LI
Sbjct: 375 CLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLI 434
Query: 396 NMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDV 455
+MY KCG + + VF +M +++ +SWN++I FA++G G+ AL+ + EM G P +
Sbjct: 435 DMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHI 494
Query: 456 TFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEG 515
T + +L AC HAG VE+G + SMTRD ++P +HY C+VD+LGRAG L+EAK+ IE
Sbjct: 495 TMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEE 554
Query: 516 LPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKER 575
+P ++W +LL AC +H + +GK+ A++L+ P++S P+VL++N+Y+ GKW++
Sbjct: 555 MPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDV 614
Query: 576 AGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDE 632
K M+++GV K+ G SWI+I F+V DK HP+ I L L+ ++ E
Sbjct: 615 MNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPE 671
Score = 186 bits (473), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 127/438 (28%), Positives = 213/438 (48%), Gaps = 53/438 (12%)
Query: 36 VLNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKC 95
VLN +S+LS C +++ G +H+ I K PF S +++ ++L+ MYSKC
Sbjct: 149 VLNEYSFASVLSACSGLNDMNKGVQVHSLIAKS-PFLS-------DVYIGSALVDMYSKC 200
Query: 96 GELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLT 155
G + DA ++FD M R+ VSWNS+I+ F +N F+ M ESR D+ TL
Sbjct: 201 GNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRV---EPDEVTLA 257
Query: 156 TMLSACDGPEFSSVSRMIHGLVFVGG-FEREITVGNALITSYFKCGCFCQGRQVFD---- 210
+++SAC V + +HG V +I + NA + Y KC + R +FD
Sbjct: 258 SVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPI 317
Query: 211 ---------------------------EMIERNVVTWTAVISGLAQNELYEDGLRLFAQM 243
+M ERNVV+W A+I+G QN E+ L LF +
Sbjct: 318 RNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLL 377
Query: 244 RGGSVSPNTLTYLSSLMACSGVQALAEGRKI------HGLLWKLGMQSDLCIESALMDLY 297
+ SV P ++ + L AC+ + L G + HG ++ G + D+ + ++L+D+Y
Sbjct: 378 KRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMY 437
Query: 298 SKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVS 357
KCG +E + +F E D VS +++ FAQNG+ EA+++F ++ G + D +
Sbjct: 438 VKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMI 497
Query: 358 AVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSN--GLINMYSKCGELHDSLQVFYEM- 414
VL G + G+ S + ++F P + ++++ + G L ++ + EM
Sbjct: 498 GVLSACGHAGFVEEGRHYFS-SMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMP 556
Query: 415 TQKNSISWNSVIAAFARH 432
Q +S+ W S++AA H
Sbjct: 557 MQPDSVIWGSLLAACKVH 574
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 118/450 (26%), Positives = 215/450 (47%), Gaps = 72/450 (16%)
Query: 150 DKATLTTMLSACDGPEFSSVS-RMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQV 208
D + +L +C + S++ R +H V GF EI + N LI +Y KCG GRQV
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQV 77
Query: 209 FDEMIERNVVTWTAVISGL-------------------------------AQNELYEDGL 237
FD+M +RN+ TW +V++GL AQ++ E+ L
Sbjct: 78 FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL 137
Query: 238 RLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLY 297
FA M N ++ S L ACSG+ + +G ++H L+ K SD+ I SAL+D+Y
Sbjct: 138 CYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMY 197
Query: 298 SKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVS 357
SKCG++ A ++F+ + + VS ++ F QNG EA+ +F ++ +E D ++
Sbjct: 198 SKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLA 257
Query: 358 AVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFV-SNGLINMYSKCGELH------DSLQV 410
+V+ +++ +G+++H ++K + +N + SN ++MY+KC + DS+ +
Sbjct: 258 SVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPI 317
Query: 411 -------------------------FYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEM 445
F +M ++N +SWN++IA + ++G+ AL + +
Sbjct: 318 RNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLL 377
Query: 446 RVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHY------ACVVDM 499
+ + PT +F ++L AC+ + GM+ V + + H +S ++DM
Sbjct: 378 KRESVCPTHYSFANILKACADLAELHLGMQAHVHVLK-HGFKFQSGEEDDIFVGNSLIDM 436
Query: 500 LGRAGLLKEAKNFIEGLPENRGVLVWQALL 529
+ G ++E + E R + W A++
Sbjct: 437 YVKCGCVEEGYLVFRKMME-RDCVSWNAMI 465
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 362 bits (928), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/589 (33%), Positives = 320/589 (54%), Gaps = 11/589 (1%)
Query: 46 LSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLF 105
L CG ++ G IH F D + + L+V +SL+ MY KCG + +A+++F
Sbjct: 67 LKACGELREVNYGEMIHG-------FVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMF 119
Query: 106 DRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPE 165
D + D V+W+SM+SGF +N FF++M + V D+ TL T++SAC
Sbjct: 120 DELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTP--DRVTLITLVSACTKLS 177
Query: 166 FSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVIS 225
S + R +HG V GF ++++ N+L+ Y K F + +F + E++V++W+ VI+
Sbjct: 178 NSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIA 237
Query: 226 GLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQS 285
QN + L +F M PN T L L AC+ L +GRK H L + G+++
Sbjct: 238 CYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLET 297
Query: 286 DLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFT-RI 344
++ + +AL+D+Y KC S E A+ +F D VS ++ F NG +I+ F+ +
Sbjct: 298 EVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIML 357
Query: 345 VTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGEL 404
+ DA ++ VLG L K HS +IK F NPF+ L+ +YS+CG L
Sbjct: 358 LENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSL 417
Query: 405 HDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEM-RVGGIAPTDVTFLSLLHA 463
++ +VF + K+++ W S+I + HG G++AL+ + M + + P +VTFLS+L A
Sbjct: 418 GNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSA 477
Query: 464 CSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVL 523
CSHAGL+ +G+ M D+RL+P EHYA +VD+LGR G L A + +P +
Sbjct: 478 CSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQ 537
Query: 524 VWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMK 583
+ LLGAC IH + EM + A +L + ++LM+N+Y +G+W+ +K
Sbjct: 538 ILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVK 597
Query: 584 EKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDE 632
++G+ K + S IEI ++V FV D+LHP+ + ++ L L H+K++
Sbjct: 598 QRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKELDLHMKED 646
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 214/445 (48%), Gaps = 18/445 (4%)
Query: 100 DAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLS 159
DA ++F M R WN+++ R + ++ F M + D TL L
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDE---EKPDNFTLPVALK 68
Query: 160 ACDGPEFSSVSRMIHGLVFVGGFEREIT------VGNALITSYFKCGCFCQGRQVFDEMI 213
AC + MIHG V ++++T VG++LI Y KCG + ++FDE+
Sbjct: 69 ACGELREVNYGEMIHGFV-----KKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELE 123
Query: 214 ERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGS-VSPNTLTYLSSLMACSGVQALAEGR 272
+ ++VTW++++SG +N + F +M S V+P+ +T ++ + AC+ + GR
Sbjct: 124 KPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGR 183
Query: 273 KIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNG 332
+HG + + G +DL + ++L++ Y+K + + A +F+ E D +S + ++ + QNG
Sbjct: 184 CVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNG 243
Query: 333 FEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSN 392
EA+ +F ++ G E + V VL L G++ H L I+K VS
Sbjct: 244 AAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVST 303
Query: 393 GLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRV-GGIA 451
L++MY KC ++ VF + +K+ +SW ++I+ F +G R+++ + M +
Sbjct: 304 ALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTR 363
Query: 452 PTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKN 511
P + + +L +CS G +E+ F S + A +V++ R G L A
Sbjct: 364 PDAILMVKVLGSCSELGFLEQAKCFH-SYVIKYGFDSNPFIGASLVELYSRCGSLGNASK 422
Query: 512 FIEGLPENRGVLVWQALLGACSIHG 536
G+ + +VW +L+ IHG
Sbjct: 423 VFNGIAL-KDTVVWTSLITGYGIHG 446
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 111/438 (25%), Positives = 194/438 (44%), Gaps = 54/438 (12%)
Query: 33 SESVLNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMY 92
S+ + L +L+S C + N LG +H +I++ FS N L + NSLL+ Y
Sbjct: 157 SDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRG--FS------NDLSLVNSLLNCY 208
Query: 93 SKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKA 152
+K ++A+ LF + +D +SW+++I+ +++N F M + T + A
Sbjct: 209 AKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGT---EPNVA 265
Query: 153 TLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEM 212
T+ +L AC R H L G E E+ V AL+ Y KC + VF +
Sbjct: 266 TVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRI 325
Query: 213 IERNVVTWTAVISGLAQNELYEDGLRLFAQM-RGGSVSPNTLTYLSSLMACSGVQALAEG 271
++VV+W A+ISG N + + F+ M + P+ + + L +CS + L +
Sbjct: 326 PRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQA 385
Query: 272 RKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQN 331
+ H + K G S+ I ++L++LYS+CGSL A ++F D V T ++ + +
Sbjct: 386 KCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIH 445
Query: 332 GFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVS 391
G +A++ F +V EV N V+ F+S
Sbjct: 446 GKGTKALETFNHMVK-SSEVKPNEVT-------------------------------FLS 473
Query: 392 NGLINMYSKCGELHDSLQVFYEMTQKNSISWN-----SVIAAFARHGDGSRALQFYEEMR 446
+++ S G +H+ L++F M ++ N ++ R GD A++ + M
Sbjct: 474 --ILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRM- 530
Query: 447 VGGIAPTDVTFLSLLHAC 464
+PT +LL AC
Sbjct: 531 --PFSPTPQILGTLLGAC 546
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 361 bits (927), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/634 (31%), Positives = 339/634 (53%), Gaps = 17/634 (2%)
Query: 20 SKAPISQYPFPATSESVLNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRR 79
S+A P T+ + + + +SL+ L IHAR++ FS
Sbjct: 2 SEASCLASPLLYTNSGIHSDSFYASLIDSATHKAQL---KQIHARLLVLGLQFSG----- 53
Query: 80 NALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQM 139
F+ L+ S G++ A ++FD +P WN++I G+ RN F + M
Sbjct: 54 ---FLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNM 110
Query: 140 SESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKC 199
+R F T +L AC G + R +H VF GF+ ++ V N LI Y KC
Sbjct: 111 QLARVSPDSF---TFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKC 167
Query: 200 GCFCQGRQVFD--EMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLS 257
R VF+ + ER +V+WTA++S AQN + L +F+QMR V P+ + +S
Sbjct: 168 RRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVS 227
Query: 258 SLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELD 317
L A + +Q L +GR IH + K+G++ + + +L +Y+KCG + A +F+ + +
Sbjct: 228 VLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPN 287
Query: 318 GVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHS 377
+ ++ +A+NG+ EAI +F ++ + D +++ + SL + ++
Sbjct: 288 LILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYE 347
Query: 378 LIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSR 437
+ + ++ + F+S+ LI+M++KCG + + VF ++ + W+++I + HG
Sbjct: 348 YVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRARE 407
Query: 438 ALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVV 497
A+ Y M GG+ P DVTFL LL AC+H+G+V +G F M DH+++P+ +HYACV+
Sbjct: 408 AISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVI 466
Query: 498 DMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSA 557
D+LGRAG L +A I+ +P GV VW ALL AC H E+G++AA QL P+++
Sbjct: 467 DLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTG 526
Query: 558 PHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADI 617
+V ++N+Y+A W A RMKEKG+ K+VG SW+E+ ++ +F VGDK HP+ +
Sbjct: 527 HYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEE 586
Query: 618 IFLELSRLLKHLKDEGYVPDKRCILYYLDQDKKD 651
I ++ + LK+ G+V +K L+ L+ ++ +
Sbjct: 587 IERQVEWIESRLKEGGFVANKDASLHDLNDEEAE 620
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 360 bits (925), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 190/568 (33%), Positives = 324/568 (57%), Gaps = 21/568 (3%)
Query: 85 WNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRT 144
WN++LS Y++ G + DA +FDRMP ++ VSWN+++S +++N + FK
Sbjct: 160 WNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFK------- 212
Query: 145 VYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFE-REITVGNALITSYFKCGCFC 203
SR + A ++ C F +++ F R++ N +IT Y + G
Sbjct: 213 --SRENWALVSW---NCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKID 267
Query: 204 QGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACS 263
+ RQ+FDE ++V TWTA++SG QN + E+ LF +M P + M
Sbjct: 268 EARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM------PERNEVSWNAMLAG 321
Query: 264 GVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTV 323
VQ E ++ L+ + ++ + ++ Y++CG + A +F+ + D VS
Sbjct: 322 YVQG--ERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAA 379
Query: 324 ILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKN 383
++ ++Q+G EA+++F ++ G ++ + S+ L +L LGKQ+H ++K
Sbjct: 380 MIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGG 439
Query: 384 FSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYE 443
+ FV N L+ MY KCG + ++ +F EM K+ +SWN++IA ++RHG G AL+F+E
Sbjct: 440 YETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFE 499
Query: 444 EMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRA 503
M+ G+ P D T +++L ACSH GLV+KG ++ +MT+D+ + P S+HYAC+VD+LGRA
Sbjct: 500 SMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRA 559
Query: 504 GLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMA 563
GLL++A N ++ +P +W LLGA +HG++E+ + AAD++ P +S +VL++
Sbjct: 560 GLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLS 619
Query: 564 NIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELS 623
N+Y++ G+W + RM++KGV K G SWIEI + +F VGD+ HP+ D IF L
Sbjct: 620 NLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLE 679
Query: 624 RLLKHLKDEGYVPDKRCILYYLDQDKKD 651
L +K GYV +L+ +++++K+
Sbjct: 680 ELDLRMKKAGYVSKTSVVLHDVEEEEKE 707
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 196/383 (51%), Gaps = 14/383 (3%)
Query: 54 NLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDT 113
N LG + + I + F FDS + WN++++ Y++ G++ +A +LFD PV+D
Sbjct: 223 NCLLGGFVKKKKIVEARQF-FDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDV 281
Query: 114 VSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMI 173
+W +M+SG+++NR + F +M E V + ML+ E +++ +
Sbjct: 282 FTWTAMVSGYIQNRMVEEARELFDKMPERNEV-------SWNAMLAGYVQGERMEMAKEL 334
Query: 174 HGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELY 233
++ R ++ N +IT Y +CG + + +FD+M +R+ V+W A+I+G +Q+
Sbjct: 335 FDVMPC----RNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHS 390
Query: 234 EDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESAL 293
+ LRLF QM N ++ S+L C+ V AL G+++HG L K G ++ + +AL
Sbjct: 391 FEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNAL 450
Query: 294 MDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDA 353
+ +Y KCGS+E A +F+ D VS ++ ++++GF E A++ F + G++ D
Sbjct: 451 LLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDD 510
Query: 354 NMVSAVLGVFGVGTSLPLGKQ-IHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFY 412
+ AVL + G+Q +++ N ++++ + G L D+ +
Sbjct: 511 ATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMK 570
Query: 413 EMT-QKNSISWNSVIAAFARHGD 434
M + ++ W +++ A HG+
Sbjct: 571 NMPFEPDAAIWGTLLGASRVHGN 593
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 124/515 (24%), Positives = 232/515 (45%), Gaps = 51/515 (9%)
Query: 41 HLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFV--------WNSLLSMY 92
H +SL + R N H ++ H+ +K+ S+ L WN +S Y
Sbjct: 17 HYTSLNGLKRRCNNAHGAANFHS--LKRATQTQIQKSQTKPLLKCGDSDIKEWNVAISSY 74
Query: 93 SKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKA 152
+ G +A+++F RMP +VS+N MISG+LRN +F+ + F +M E D
Sbjct: 75 MRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPER-------DLV 127
Query: 153 TLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEM 212
+ M+ +R + ++ ER++ N +++ Y + GC R VFD M
Sbjct: 128 SWNVMIKGYVRNRNLGKARELFEIM----PERDVCSWNTMLSGYAQNGCVDDARSVFDRM 183
Query: 213 IERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGS-VSPNTLTYLSSLMACSGVQALAEG 271
E+N V+W A++S QN E+ LF + VS N L L + + E
Sbjct: 184 PEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCL-----LGGFVKKKKIVEA 238
Query: 272 RKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQN 331
R+ + D+ + ++ Y++ G ++ A Q+F+ + D + T ++ + QN
Sbjct: 239 RQFFDSM----NVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQN 294
Query: 332 GFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVS 391
EEA ++F ++ EV N A+L + G + + K++ ++ +N S
Sbjct: 295 RMVEEARELFDKMPERN-EVSWN---AMLAGYVQGERMEMAKELFDVMPCRNVS----TW 346
Query: 392 NGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIA 451
N +I Y++CG++ ++ +F +M +++ +SW ++IA +++ G AL+ + +M G
Sbjct: 347 NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGR 406
Query: 452 PTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVD-----MLGRAGLL 506
+F S L C+ +E G + RL C V M + G +
Sbjct: 407 LNRSSFSSALSTCADVVALELGKQL------HGRLVKGGYETGCFVGNALLLMYCKCGSI 460
Query: 507 KEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMG 541
+EA + + + + ++ W ++ S HG E+
Sbjct: 461 EEANDLFKEMA-GKDIVSWNTMIAGYSRHGFGEVA 494
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 65/125 (52%), Gaps = 11/125 (8%)
Query: 37 LNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCG 96
LN + SS LS C L LG +H R++K FV N+LL MY KCG
Sbjct: 407 LNRSSFSSALSTCADVVALELGKQLHGRLVK--------GGYETGCFVGNALLLMYCKCG 458
Query: 97 ELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTT 156
+++A LF M +D VSWN+MI+G+ R+ + RFF+ M + D AT+
Sbjct: 459 SIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGL---KPDDATMVA 515
Query: 157 MLSAC 161
+LSAC
Sbjct: 516 VLSAC 520
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 356 bits (913), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 197/584 (33%), Positives = 315/584 (53%), Gaps = 13/584 (2%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDA 101
LS +L CG+ N+ G S+HA +K +S ++++V +SLL MY + G++ +
Sbjct: 111 LSVVLKACGQSSNIAYGESLHAYAVK--------TSLLSSVYVGSSLLDMYKRVGKIDKS 162
Query: 102 IKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSAC 161
++F MP R+ V+W ++I+G + + G +F +MS S + D T L AC
Sbjct: 163 CRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELS---DTYTFAIALKAC 219
Query: 162 DGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWT 221
G + IH V V GF + V N+L T Y +CG G +F+ M ER+VV+WT
Sbjct: 220 AGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWT 279
Query: 222 AVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKL 281
++I + + F +MR V PN T+ S AC+ + L G ++H + L
Sbjct: 280 SLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSL 339
Query: 282 GMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIF 341
G+ L + +++M +YS CG+L A +F+ D +S + I+ + Q GF EE + F
Sbjct: 340 GLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYF 399
Query: 342 TRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKC 401
+ + G + ++++L V G + G+Q+H+L + QN V + LINMYSKC
Sbjct: 400 SWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKC 459
Query: 402 GELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLL 461
G + ++ +F E + + +S ++I +A HG A+ +E+ G P VTF+S+L
Sbjct: 460 GSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVL 519
Query: 462 HACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRG 521
AC+H+G ++ G + M + + P EHY C+VD+L RAG L +A+ I + +
Sbjct: 520 TACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKD 579
Query: 522 VLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKR 581
+VW LL AC GD E G+ AA++++ P + V +ANIYS+ G +E A K
Sbjct: 580 DVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKN 639
Query: 582 MKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIF--LELS 623
MK KGV KE G S I+I VS+FV GD+ HPQ++ I+ LEL+
Sbjct: 640 MKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILELA 683
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 124/454 (27%), Positives = 226/454 (49%), Gaps = 3/454 (0%)
Query: 86 NSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTV 145
NS L G L+ A ++FD+MP D VSW S+I ++ + D F M
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 146 YSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQG 205
S D + L+ +L AC + +H + VG++L+ Y + G +
Sbjct: 104 VSP-DTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKS 162
Query: 206 RQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGV 265
+VF EM RN VTWTA+I+GL Y++GL F++M +T T+ +L AC+G+
Sbjct: 163 CRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGL 222
Query: 266 QALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVIL 325
+ + G+ IH + G + LC+ ++L +Y++CG ++ +FE+ E D VS T ++
Sbjct: 223 RQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLI 282
Query: 326 VAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFS 385
VA+ + G E +A++ F ++ + + +++ + L G+Q+H ++ +
Sbjct: 283 VAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLN 342
Query: 386 QNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEM 445
+ VSN ++ MYS CG L + +F M ++ ISW+++I + + G G +++ M
Sbjct: 343 DSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWM 402
Query: 446 RVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGL 505
R G PTD SLL + ++E G + + ++ L S + +++M + G
Sbjct: 403 RQSGTKPTDFALASLLSVSGNMAVIEGGRQ-VHALALCFGLEQNSTVRSSLINMYSKCGS 461
Query: 506 LKEAKNFIEGLPENRGVLVWQALLGACSIHGDSE 539
+KEA + I G + ++ A++ + HG S+
Sbjct: 462 IKEA-SMIFGETDRDDIVSLTAMINGYAEHGKSK 494
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 354 bits (909), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 205/597 (34%), Positives = 325/597 (54%), Gaps = 25/597 (4%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDA 101
LS++LS C L G IHA I++ D+S + N L+ Y KCG + A
Sbjct: 252 LSTVLSACSILPFLEGGKQIHAHILRYG--LEMDAS------LMNVLIDSYVKCGRVIAA 303
Query: 102 IKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSAC 161
KLF+ MP ++ +SW +++SG+ +N F MS+ + D +++L++C
Sbjct: 304 HKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGL---KPDMYACSSILTSC 360
Query: 162 DGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWT 221
+H + V N+LI Y KC C R+VFD +VV +
Sbjct: 361 ASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFN 420
Query: 222 AVISGLA----QNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGL 277
A+I G + Q EL+E L +F MR + P+ LT++S L A + + +L ++IHGL
Sbjct: 421 AMIEGYSRLGTQWELHE-ALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGL 479
Query: 278 LWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEA 337
++K G+ D+ SAL+D+YS C L+ + +F+ + D V + + Q EEA
Sbjct: 480 MFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEA 539
Query: 338 IQIFTRIVTLGIEVD----ANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNG 393
+ +F + D ANMV+A G S+ LG++ H ++K+ NP+++N
Sbjct: 540 LNLFLELQLSRERPDEFTFANMVTAA----GNLASVQLGQEFHCQLLKRGLECNPYITNA 595
Query: 394 LINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPT 453
L++MY+KCG D+ + F ++ + WNSVI+++A HG+G +ALQ E+M GI P
Sbjct: 596 LLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPN 655
Query: 454 DVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFI 513
+TF+ +L ACSHAGLVE G++ M R + P +EHY C+V +LGRAG L +A+ I
Sbjct: 656 YITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELI 714
Query: 514 EGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWK 573
E +P +VW++LL C+ G+ E+ + AA+ IL+ P S +++NIY+++G W
Sbjct: 715 EKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWT 774
Query: 574 ERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLK 630
E +RMK +GV KE G SWI I+K+V F+ DK H +A+ I+ L LL ++
Sbjct: 775 EAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 128/440 (29%), Positives = 226/440 (51%), Gaps = 16/440 (3%)
Query: 29 FPATSESVLNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSL 88
FP+T + + LL + D LH + +H +II D+ ++ N L
Sbjct: 35 FPSTI-GIRGRREFARLLQLRASDDLLHYQNVVHGQIIVWG--LELDT------YLSNIL 85
Query: 89 LSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSR 148
+++YS+ G + A K+F++MP R+ VSW++M+S + ++ F + +R
Sbjct: 86 INLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRK--DS 143
Query: 149 FDKATLTTMLSACDGPEFSS--VSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGR 206
++ L++ + AC G + + + + GF+R++ VG LI Y K G R
Sbjct: 144 PNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYAR 203
Query: 207 QVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQ 266
VFD + E++ VTWT +ISG + L+LF Q+ +V P+ + L ACS +
Sbjct: 204 LVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILP 263
Query: 267 ALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILV 326
L G++IH + + G++ D + + L+D Y KCG + A ++F + +S T +L
Sbjct: 264 FLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLS 323
Query: 327 AFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQ 386
+ QN +EA+++FT + G++ D S++L +L G Q+H+ IK N
Sbjct: 324 GYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGN 383
Query: 387 NPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHG---DGSRALQFYE 443
+ +V+N LI+MY+KC L D+ +VF + + +N++I ++R G + AL +
Sbjct: 384 DSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFR 443
Query: 444 EMRVGGIAPTDVTFLSLLHA 463
+MR I P+ +TF+SLL A
Sbjct: 444 DMRFRLIRPSLLTFVSLLRA 463
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 173/348 (49%), Gaps = 8/348 (2%)
Query: 172 MIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNE 231
++HG + V G E + + N LI Y + G R+VF++M ERN+V+W+ ++S +
Sbjct: 65 VVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHG 124
Query: 232 LYEDGLRLFAQM-RGGSVSPNTLTYLSSLMACSGVQALAEGR----KIHGLLWKLGMQSD 286
+YE+ L +F + R SPN S + ACSG+ GR ++ L K G D
Sbjct: 125 IYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDG--RGRWMVFQLQSFLVKSGFDRD 182
Query: 287 LCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVT 346
+ + + L+D Y K G+++ A +F++ E V+ T ++ + G ++Q+F +++
Sbjct: 183 VYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLME 242
Query: 347 LGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHD 406
+ D ++S VL + L GKQIH+ I++ + + N LI+ Y KCG +
Sbjct: 243 DNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIA 302
Query: 407 SLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSH 466
+ ++F M KN ISW ++++ + ++ A++ + M G+ P S+L +C+
Sbjct: 303 AHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCAS 362
Query: 467 AGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIE 514
+ G + + + T L S ++DM + L +A+ +
Sbjct: 363 LHALGFGTQ-VHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFD 409
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 353 bits (905), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 176/506 (34%), Positives = 292/506 (57%), Gaps = 1/506 (0%)
Query: 146 YSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQG 205
Y D+ T+L C + R++H + F +I +GN L+ Y KCG +
Sbjct: 55 YIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEA 114
Query: 206 RQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGV 265
R+VF++M +R+ VTWT +ISG +Q++ D L F QM SPN T S + A +
Sbjct: 115 RKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAE 174
Query: 266 QALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVIL 325
+ G ++HG K G S++ + SAL+DLY++ G ++ A +F++ E + VS ++
Sbjct: 175 RRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALI 234
Query: 326 VAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFS 385
A+ E+A+++F ++ G +++ G L GK +H+ +IK
Sbjct: 235 AGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEK 294
Query: 386 QNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEM 445
F N L++MY+K G +HD+ ++F + +++ +SWNS++ A+A+HG G A+ ++EEM
Sbjct: 295 LVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEM 354
Query: 446 RVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGL 505
R GI P +++FLS+L ACSH+GL+++G + M +D + P + HY VVD+LGRAG
Sbjct: 355 RRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDG-IVPEAWHYVTVVDLLGRAGD 413
Query: 506 LKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANI 565
L A FIE +P +W+ALL AC +H ++E+G +AA+ + P PHV++ NI
Sbjct: 414 LNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNI 473
Query: 566 YSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRL 625
Y++ G+W + A K+MKE GV KE SW+EI+ + FV D+ HPQ + I + +
Sbjct: 474 YASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEV 533
Query: 626 LKHLKDEGYVPDKRCILYYLDQDKKD 651
L +K+ GYVPD ++ ++DQ +++
Sbjct: 534 LAKIKELGYVPDTSHVIVHVDQQERE 559
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 134/428 (31%), Positives = 214/428 (50%), Gaps = 57/428 (13%)
Query: 43 SSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAI 102
++LL C L G +HA I++ S R+ + + N+LL+MY+KCG L++A
Sbjct: 64 NTLLKKCTVFKLLIQGRIVHAHILQ--------SIFRHDIVMGNTLLNMYAKCGSLEEAR 115
Query: 103 KLFDRMPVRDTVSWNSMISGFLR-NRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSAC 161
K+F++MP RD V+W ++ISG+ + +R DA FF QM R YS ++ TL++++ A
Sbjct: 116 KVFEKMPQRDFVTWTTLISGYSQHDRPCDA-LLFFNQM--LRFGYSP-NEFTLSSVIKAA 171
Query: 162 DGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWT 221
+HG GF+ + VG+AL+ Y + G + VFD + RN V+W
Sbjct: 172 AAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWN 231
Query: 222 AVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKL 281
A+I+G A+ E L LF M P+ +Y S ACS L +G+ +H + K
Sbjct: 232 ALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKS 291
Query: 282 GMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIF 341
G + + L+D+Y+K GS+ A +IF+ + D VS +L A+AQ+GF +EA+ F
Sbjct: 292 GEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWF 351
Query: 342 TRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKC 401
+ +GI N +S F+S ++ S
Sbjct: 352 EEMRRVGIR--PNEIS-------------------------------FLS--VLTACSHS 376
Query: 402 GELHDSLQVFYEMTQKNSI---SWN--SVIAAFARHGDGSRALQFYEEMRVGGIAPTDVT 456
G L + +YE+ +K+ I +W+ +V+ R GD +RAL+F EEM I PT
Sbjct: 377 GLLDEGWH-YYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEM---PIEPTAAI 432
Query: 457 FLSLLHAC 464
+ +LL+AC
Sbjct: 433 WKALLNAC 440
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 154/295 (52%), Gaps = 4/295 (1%)
Query: 243 MRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGS 302
+ G + + Y + L C+ + L +GR +H + + + D+ + + L+++Y+KCGS
Sbjct: 51 LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110
Query: 303 LEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGV 362
LE A ++FE + D V+ T ++ ++Q+ +A+ F +++ G + +S+V+
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170
Query: 363 FGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISW 422
G Q+H +K F N V + L+++Y++ G + D+ VF + +N +SW
Sbjct: 171 AAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSW 230
Query: 423 NSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTR 482
N++IA AR +AL+ ++ M G P+ ++ SL ACS G +E+G M +
Sbjct: 231 NALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIK 290
Query: 483 D-HRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHG 536
+L + + ++DM ++G + +A+ + L + R V+ W +LL A + HG
Sbjct: 291 SGEKLVAFAGN--TLLDMYAKSGSIHDARKIFDRLAK-RDVVSWNSLLTAYAQHG 342
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 352 bits (904), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 199/611 (32%), Positives = 316/611 (51%), Gaps = 39/611 (6%)
Query: 57 LGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSW 116
+ SS +AR + FD + LF WN+LL YSK G + + F+++P RD V+W
Sbjct: 54 MKSSTYARRV-------FDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTW 106
Query: 117 NSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGL 176
N +I G+ + A + + M R + + TL TML S+ + IHG
Sbjct: 107 NVLIEGYSLSGLVGAAVKAYNTMM--RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQ 164
Query: 177 VFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVV------------------ 218
V GFE + VG+ L+ Y GC ++VF + +RN V
Sbjct: 165 VIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDA 224
Query: 219 ------------TWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQ 266
+W A+I GLAQN L ++ + F +M+ + + + S L AC G+
Sbjct: 225 LQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLG 284
Query: 267 ALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILV 326
A+ EG++IH + + Q + + SAL+D+Y KC L A +F+ ++ + VS T ++V
Sbjct: 285 AINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVV 344
Query: 327 AFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQ 386
+ Q G EEA++IF + GI+ D + + +SL G Q H I
Sbjct: 345 GYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIH 404
Query: 387 NPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMR 446
VSN L+ +Y KCG++ DS ++F EM ++++SW ++++A+A+ G +Q +++M
Sbjct: 405 YVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMV 464
Query: 447 VGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLL 506
G+ P VT ++ ACS AGLVEKG + MT ++ + P HY+C++D+ R+G L
Sbjct: 465 QHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRL 524
Query: 507 KEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIY 566
+EA FI G+P + W LL AC G+ E+GK+AA+ LI P A + L+++IY
Sbjct: 525 EEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIY 584
Query: 567 SAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLL 626
+++GKW A + M+EK V KE G SWI+ ++ SF D+ P D I+ +L L
Sbjct: 585 ASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELN 644
Query: 627 KHLKDEGYVPD 637
+ D GY PD
Sbjct: 645 NKIIDNGYKPD 655
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 211/427 (49%), Gaps = 37/427 (8%)
Query: 37 LNHAHLSSLLSVCGRDGNLHLGSSIHARIIK--------------------------QPP 70
L L ++L + +G++ LG IH ++IK +
Sbjct: 137 LTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKV 196
Query: 71 FFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFD 130
F+ D RN + ++NSL+ CG ++DA++LF M +D+VSW +MI G +N
Sbjct: 197 FYGLDD--RNTV-MYNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAMIKGLAQNGLAK 252
Query: 131 AGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGN 190
F++M + + D+ ++L AC G + + IH + F+ I VG+
Sbjct: 253 EAIECFREM---KVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGS 309
Query: 191 ALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSP 250
ALI Y KC C + VFD M ++NVV+WTA++ G Q E+ +++F M+ + P
Sbjct: 310 ALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDP 369
Query: 251 NTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIF 310
+ T ++ AC+ V +L EG + HG G+ + + ++L+ LY KCG ++ + ++F
Sbjct: 370 DHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLF 429
Query: 311 ESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLP 370
D VS T ++ A+AQ G E IQ+F ++V G++ D ++ V+ +
Sbjct: 430 NEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVE 489
Query: 371 LGKQIHSLIIKKNFSQNPFVSN--GLINMYSKCGELHDSLQVFYEMT-QKNSISWNSVIA 427
G++ L+ + + P + + +I+++S+ G L ++++ M ++I W ++++
Sbjct: 490 KGQRYFKLMTSE-YGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLS 548
Query: 428 AFARHGD 434
A G+
Sbjct: 549 ACRNKGN 555
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 140/319 (43%), Gaps = 53/319 (16%)
Query: 250 PNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQI 309
P T Y + + A + +++ R++ + Q +L + L+ YSK G +
Sbjct: 39 PETFLYNNIVHAYALMKSSTYARRVFDRI----PQPNLFSWNNLLLAYSKAGLISEMEST 94
Query: 310 FESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVL-GVFGVGTS 368
FE + DGV+ V++ ++ +G A++ + T+ + AN+ L + + +S
Sbjct: 95 FEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYN---TMMRDFSANLTRVTLMTMLKLSSS 151
Query: 369 ---LPLGKQIHSLIIKKNFSQNPFVSNGLINMYSK------------------------- 400
+ LGKQIH +IK F V + L+ MY+
Sbjct: 152 NGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSL 211
Query: 401 ------CGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTD 454
CG + D+LQ+F M +K+S+SW ++I A++G A++ + EM+V G+
Sbjct: 212 MGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQ 270
Query: 455 VTFLSLLHACSHAGLVEKGMEFLVSMTR----DHRLSPRSEHYACVVDMLGRAGLLKEAK 510
F S+L AC G + +G + + R DH + ++DM + L AK
Sbjct: 271 YPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVG-----SALIDMYCKCKCLHYAK 325
Query: 511 NFIEGLPENRGVLVWQALL 529
+ + + + V+ W A++
Sbjct: 326 TVFDRMKQ-KNVVSWTAMV 343
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 352 bits (904), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 208/610 (34%), Positives = 330/610 (54%), Gaps = 35/610 (5%)
Query: 43 SSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAI 102
+S+L C L LG +HA +K F+ D R A L MY+KC +QDA
Sbjct: 285 ASVLRSCAALSELRLGGQLHAHALKSD--FAADGIVRTAT------LDMYAKCDNMQDAQ 336
Query: 103 KLFDRMPVRDTVSWNSMISGFLRNRD-FDAGFRFFKQMSESRTVYSRFDKATLTTMLSAC 161
LFD + S+N+MI+G+ + F A F + MS FD+ +L+ + AC
Sbjct: 337 ILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLG----FDEISLSGVFRAC 392
Query: 162 DGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWT 221
+ S I+GL ++ V NA I Y KC + +VFDEM R+ V+W
Sbjct: 393 ALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWN 452
Query: 222 AVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKL 281
A+I+ QN + L LF M + P+ T+ S L AC+G +L G +IH + K
Sbjct: 453 AIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKS 511
Query: 282 GMQSDLCIESALMDLYSKCGSLEGAWQI----FESA------EELDG----------VSL 321
GM S+ + +L+D+YSKCG +E A +I F+ A EEL+ VS
Sbjct: 512 GMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSW 571
Query: 322 TVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIK 381
I+ + E+A +FTR++ +GI D + VL S LGKQIH+ +IK
Sbjct: 572 NSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIK 631
Query: 382 KNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQF 441
K + ++ + L++MYSKCG+LHDS +F + +++ ++WN++I +A HG G A+Q
Sbjct: 632 KELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQL 691
Query: 442 YEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLG 501
+E M + I P VTF+S+L AC+H GL++KG+E+ M RD+ L P+ HY+ +VD+LG
Sbjct: 692 FERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILG 751
Query: 502 RAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDS-EMGKFAADQLILAAPASSAPHV 560
++G +K A I +P ++W+ LLG C+IH ++ E+ + A L+ P S+ +
Sbjct: 752 KSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYT 811
Query: 561 LMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFL 620
L++N+Y+ G W++ + + M+ + KE G SW+E+ ++ F+VGDK HP+ + I+
Sbjct: 812 LLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYE 871
Query: 621 ELSRLLKHLK 630
EL + +K
Sbjct: 872 ELGLIYSEMK 881
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 145/494 (29%), Positives = 248/494 (50%), Gaps = 28/494 (5%)
Query: 40 AHLSSLLSVCGRDGNLHLGSSIHARIIK---QPPFFS--------------------FDS 76
+ S + C + G L LG HA +I +P F FD
Sbjct: 49 TNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDK 108
Query: 77 SRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFF 136
+ WN +++ YSK ++ A F+ MPVRD VSWNSM+SG+L+N + F
Sbjct: 109 MPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVF 168
Query: 137 KQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSY 196
M FD T +L C E +S+ IHG+V G + ++ +AL+ Y
Sbjct: 169 VDMGREGI---EFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMY 225
Query: 197 FKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYL 256
K F + +VF + E+N V+W+A+I+G QN L L+ F +M+ + + Y
Sbjct: 226 AKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYA 285
Query: 257 SSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEEL 316
S L +C+ + L G ++H K +D + +A +D+Y+KC +++ A +F+++E L
Sbjct: 286 SVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENL 345
Query: 317 DGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIH 376
+ S ++ ++Q +A+ +F R+++ G+ D +S V + L G QI+
Sbjct: 346 NRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIY 405
Query: 377 SLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGS 436
L IK + S + V+N I+MY KC L ++ +VF EM +++++SWN++IAA ++G G
Sbjct: 406 GLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGY 465
Query: 437 RALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACV 496
L + M I P + TF S+L AC+ G + GME S+ + ++ S +
Sbjct: 466 ETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVKSG-MASNSSVGCSL 523
Query: 497 VDMLGRAGLLKEAK 510
+DM + G+++EA+
Sbjct: 524 IDMYSKCGMIEEAE 537
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 352 bits (903), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 210/660 (31%), Positives = 339/660 (51%), Gaps = 76/660 (11%)
Query: 58 GSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWN 117
G ++HAR + FD F WN++LS YSK G++ + FD++P RD+VSW
Sbjct: 63 GYALHARKL-------FDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWT 115
Query: 118 SMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLV 177
+MI G+ + R M + ++F TLT +L++ + +H +
Sbjct: 116 TMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQF---TLTNVLASVAATRCMETGKKVHSFI 172
Query: 178 FVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMI------------------------ 213
G ++V N+L+ Y KCG + VFD M+
Sbjct: 173 VKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAM 232
Query: 214 -------ERNVVTWTAVISGLAQNELYEDGLRLFAQM-RGGSVSPNTLTYLSSLMACSGV 265
ER++VTW ++ISG Q L +F++M R +SP+ T S L AC+ +
Sbjct: 233 AQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANL 292
Query: 266 QALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQ----------------- 308
+ L G++IH + G + +AL+ +YS+CG +E A +
Sbjct: 293 EKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTA 352
Query: 309 ----------------IFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVD 352
IF S ++ D V+ T ++V + Q+G EAI +F +V G +
Sbjct: 353 LLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPN 412
Query: 353 ANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFY 412
+ ++A+L V SL GKQIH +K + VSN LI MY+K G + + + F
Sbjct: 413 SYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFD 472
Query: 413 EM-TQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVE 471
+ +++++SW S+I A A+HG AL+ +E M + G+ P +T++ + AC+HAGLV
Sbjct: 473 LIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVN 532
Query: 472 KGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGA 531
+G ++ M ++ P HYAC+VD+ GRAGLL+EA+ FIE +P V+ W +LL A
Sbjct: 533 QGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSA 592
Query: 532 CSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEV 591
C +H + ++GK AA++L+L P +S + +AN+YSA GKW+E A K MK+ V KE
Sbjct: 593 CRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQ 652
Query: 592 GVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDEGYVPDKRCILYYLDQDKKD 651
G SWIE+ +V F V D HP+ + I++ + ++ +K GYVPD +L+ L+++ K+
Sbjct: 653 GFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKE 712
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 135/305 (44%), Gaps = 46/305 (15%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDA 101
L+S+LS C L +G IH+ I+ FD S V N+L+SMYS+CG ++ A
Sbjct: 282 LASVLSACANLEKLCIGKQIHSHIVTT----GFDISG----IVLNALISMYSRCGGVETA 333
Query: 102 IKLFDR---------------------------------MPVRDTVSWNSMISGFLRNRD 128
+L ++ + RD V+W +MI G+ ++
Sbjct: 334 RRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGS 393
Query: 129 FDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITV 188
+ F+ M R + TL MLS S + IHG G ++V
Sbjct: 394 YGEAINLFRSMVGGG---QRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSV 450
Query: 189 GNALITSYFKCGCFCQGRQVFDEM-IERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGS 247
NALIT Y K G + FD + ER+ V+WT++I LAQ+ E+ L LF M
Sbjct: 451 SNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEG 510
Query: 248 VSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLG-MQSDLCIESALMDLYSKCGSLEGA 306
+ P+ +TY+ AC+ + +GR+ ++ + + L + ++DL+ + G L+ A
Sbjct: 511 LRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEA 570
Query: 307 WQIFE 311
+ E
Sbjct: 571 QEFIE 575
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 86/179 (48%), Gaps = 8/179 (4%)
Query: 375 IHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGD 434
+H +IK + ++ N L+N+YSK G + ++F EM + + SWN+V++A+++ GD
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 435 GSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYA 494
+F++++ V++ +++ + G K + + M ++ + P
Sbjct: 96 MDSTCEFFDQLP----QRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEG-IEPTQFTLT 150
Query: 495 CVVDMLGRAGLL---KEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLIL 550
V+ + + K+ +FI L V V +LL + GD M KF D++++
Sbjct: 151 NVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVV 209
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 350 bits (899), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 192/621 (30%), Positives = 340/621 (54%), Gaps = 10/621 (1%)
Query: 31 ATSESVLNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLS 90
++S ++ +H ++LL C + +HA +K FD++ L V N LL
Sbjct: 139 SSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVK----LGFDTN--PFLTVSNVLLK 192
Query: 91 MYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFD 150
Y + L A LF+ +P +D+V++N++I+G+ ++ + F +M +S S F
Sbjct: 193 SYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDF- 251
Query: 151 KATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFD 210
T + +L A G ++ + +H L GF R+ +VGN ++ Y K + R +FD
Sbjct: 252 --TFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFD 309
Query: 211 EMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAE 270
EM E + V++ VIS +Q + YE L F +M+ + + L + + +L
Sbjct: 310 EMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQM 369
Query: 271 GRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQ 330
GR++H S L + ++L+D+Y+KC E A IF+S + VS T ++ + Q
Sbjct: 370 GRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQ 429
Query: 331 NGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFV 390
G +++FT++ + D + + VL SL LGKQ+H+ II+ +N F
Sbjct: 430 KGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFS 489
Query: 391 SNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGI 450
+GL++MY+KCG + D++QVF EM +N++SWN++I+A A +GDG A+ + +M G+
Sbjct: 490 GSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGL 549
Query: 451 APTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAK 510
P V+ L +L ACSH G VE+G E+ +M+ + ++P+ +HYAC++D+LGR G EA+
Sbjct: 550 QPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAE 609
Query: 511 NFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLI-LAAPASSAPHVLMANIYSAE 569
++ +P ++W ++L AC IH + + + AA++L + +A +V M+NIY+A
Sbjct: 610 KLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAA 669
Query: 570 GKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHL 629
G+W++ K M+E+G+ K SW+E++ ++ F D+ HP D I +++ L +
Sbjct: 670 GEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEI 729
Query: 630 KDEGYVPDKRCILYYLDQDKK 650
+ EGY PD ++ +D+ K
Sbjct: 730 EREGYKPDTSSVVQDVDEQMK 750
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 126/469 (26%), Positives = 230/469 (49%), Gaps = 19/469 (4%)
Query: 86 NSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTV 145
N+++S + K G++ A LFD MP R V+W ++ + RN FD F+ F+QM S +
Sbjct: 83 NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSC 142
Query: 146 YSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFERE--ITVGNALITSYFKCGCFC 203
+ D T TT+L C+ + +H GF+ +TV N L+ SY C
Sbjct: 143 -TLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSY------C 195
Query: 204 QGRQ------VFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLS 257
+ R+ +F+E+ E++ VT+ +I+G ++ LY + + LF +MR P+ T+
Sbjct: 196 EVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSG 255
Query: 258 SLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELD 317
L A G+ A G+++H L G D + + ++D YSK + +F+ ELD
Sbjct: 256 VLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELD 315
Query: 318 GVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHS 377
VS V++ +++Q E ++ F + +G + + +L + +SL +G+Q+H
Sbjct: 316 FVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHC 375
Query: 378 LIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSR 437
+ V N L++MY+KC ++ +F + Q+ ++SW ++I+ + + G
Sbjct: 376 QALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGA 435
Query: 438 ALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVV 497
L+ + +MR + TF ++L A + + G + + R L + +V
Sbjct: 436 GLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSG-SGLV 494
Query: 498 DMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSE--MGKFA 544
DM + G +K+A E +P+ R + W AL+ A + +GD E +G FA
Sbjct: 495 DMYAKCGSIKDAVQVFEEMPD-RNAVSWNALISAHADNGDGEAAIGAFA 542
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 350 bits (897), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 195/626 (31%), Positives = 348/626 (55%), Gaps = 11/626 (1%)
Query: 7 FNTHLPSWVDSLKSKAPISQYPFPATSESVLNHAHLSSLLSVCGRDGNLHLGSSIHARII 66
+N+ L S+ S KS + + + N + S L+ C LG IHA ++
Sbjct: 252 WNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVL 311
Query: 67 KQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRN 126
K S+ + L+V N+L++MY++CG++ A ++ +M D V+WNS+I G+++N
Sbjct: 312 KS-------STHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQN 364
Query: 127 RDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREI 186
+ FF M + + D+ ++T++++A +H V G++ +
Sbjct: 365 LMYKEALEFFSDMIAAG---HKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNL 421
Query: 187 TVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGG 246
VGN LI Y KC C + F M ++++++WT VI+G AQN+ + + L LF +
Sbjct: 422 QVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKK 481
Query: 247 SVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGA 306
+ + + S L A S ++++ ++IH + + G+ D I++ L+D+Y KC ++ A
Sbjct: 482 RMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL-DTVIQNELVDVYGKCRNMGYA 540
Query: 307 WQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVG 366
++FES + D VS T ++ + A NG E EA+++F R+V G+ D+ + +L
Sbjct: 541 TRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASL 600
Query: 367 TSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVI 426
++L G++IH +++K F ++ +++MY+ CG+L + VF + +K + + S+I
Sbjct: 601 SALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMI 660
Query: 427 AAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRL 486
A+ HG G A++ +++MR ++P ++FL+LL+ACSHAGL+++G FL M ++ L
Sbjct: 661 NAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYEL 720
Query: 487 SPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAAD 546
P EHY C+VDMLGRA + EA F++ + VW ALL AC H + E+G+ AA
Sbjct: 721 EPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQ 780
Query: 547 QLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFV 606
+L+ P + VL++N+++ +G+W + +MK G+ K G SWIE+D +V F
Sbjct: 781 RLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFT 840
Query: 607 VGDKLHPQADIIFLELSRLLKHLKDE 632
DK HP++ I+ +LS + + L+ E
Sbjct: 841 ARDKSHPESKEIYEKLSEVTRKLERE 866
Score = 202 bits (514), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 142/532 (26%), Positives = 266/532 (50%), Gaps = 16/532 (3%)
Query: 7 FNTHLPSWVDSLKSKAPISQYPFPATSESVLNHAHLSSLLSVCGRDGNLHLGSSIHARII 66
+NT + ++V + + + ++ Y L + +LL C + ++ GS +H+ ++
Sbjct: 150 WNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLV 209
Query: 67 KQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVR-DTVSWNSMISGFLR 125
K + S+ F+ N+L+SMY+K +L A +LFD + D V WNS++S +
Sbjct: 210 K----LGYHSTG----FIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYST 261
Query: 126 NRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGG-FER 184
+ F++M + + + T+ + L+ACDG ++ + + IH V
Sbjct: 262 SGKSLETLELFREMHMTGPAPNSY---TIVSALTACDGFSYAKLGKEIHASVLKSSTHSS 318
Query: 185 EITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMR 244
E+ V NALI Y +CG Q ++ +M +VVTW ++I G QN +Y++ L F+ M
Sbjct: 319 ELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMI 378
Query: 245 GGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLE 304
+ ++ S + A + L G ++H + K G S+L + + L+D+YSKC
Sbjct: 379 AAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTC 438
Query: 305 GAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFG 364
+ F + D +S T ++ +AQN EA+++F + +E+D ++ ++L
Sbjct: 439 YMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASS 498
Query: 365 VGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNS 424
V S+ + K+IH I++K + + N L+++Y KC + + +VF + K+ +SW S
Sbjct: 499 VLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTS 557
Query: 425 VIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDH 484
+I++ A +G+ S A++ + M G++ V L +L A + + KG E + R
Sbjct: 558 MISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKG 617
Query: 485 RLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHG 536
S A VVDM G L+ AK + + E +G+L + +++ A +HG
Sbjct: 618 FCLEGSIAVA-VVDMYACCGDLQSAKAVFDRI-ERKGLLQYTSMINAYGMHG 667
Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 130/506 (25%), Positives = 243/506 (48%), Gaps = 37/506 (7%)
Query: 45 LLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKL 104
+L +CG+ + G +H+RI K P F D F+ L+ MY KCG L DA K+
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSFELD-------FLAGKLVFMYGKCGSLDDAEKV 138
Query: 105 FDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGP 164
FD MP R +WN+MI ++ N + + + M R ++ +L AC
Sbjct: 139 FDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNM---RVEGVPLGLSSFPALLKACAKL 195
Query: 165 EFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIER-NVVTWTAV 223
+H L+ G+ + NAL++ Y K R++FD E+ + V W ++
Sbjct: 196 RDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSI 255
Query: 224 ISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGM 283
+S + + + L LF +M +PN+ T +S+L AC G G++IH + K
Sbjct: 256 LSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSST 315
Query: 284 Q-SDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFT 342
S+L + +AL+ +Y++CG + A +I D V+ ++ + QN +EA++ F+
Sbjct: 316 HSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFS 375
Query: 343 RIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCG 402
++ G + D +++++ G ++L G ++H+ +IK + N V N LI+MYSKC
Sbjct: 376 DMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCN 435
Query: 403 ELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLH 462
+ F M K+ ISW +VIA +A++ AL+ + ++ + ++ S+L
Sbjct: 436 LTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILR 495
Query: 463 ACS-----------HAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKN 511
A S H ++ KG+ L ++ ++ +VD+ G+ + A
Sbjct: 496 ASSVLKSMLIVKEIHCHILRKGL--LDTVIQNE-----------LVDVYGKCRNMGYATR 542
Query: 512 FIEGLPENRGVLVWQALLGACSIHGD 537
E + + + V+ W +++ + +++G+
Sbjct: 543 VFESI-KGKDVVSWTSMISSSALNGN 567
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 348 bits (893), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 204/587 (34%), Positives = 322/587 (54%), Gaps = 29/587 (4%)
Query: 43 SSLLSVC-GRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDA 101
S+ LS C G +G L LG + + ++K + + L V NS ++MYS+ G + A
Sbjct: 178 STALSFCVGSEGFL-LGLQLQSTVVK--------TGLESDLVVGNSFITMYSRSGSFRGA 228
Query: 102 IKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFR---FFKQMSESRTVYSRFDKATLTTML 158
++FD M +D +SWNS++SG + F GF F+ M D + T+++
Sbjct: 229 RRVFDEMSFKDMISWNSLLSGLSQEGTF--GFEAVVIFRDMMREGV---ELDHVSFTSVI 283
Query: 159 SACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVV 218
+ C ++R IHGL G+E + VGN L++ Y KCG + VF +M ERNVV
Sbjct: 284 TTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVV 343
Query: 219 TWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLL 278
+WT +IS +D + +F MR V PN +T++ + A + + EG KIHGL
Sbjct: 344 SWTTMISSNK-----DDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLC 398
Query: 279 WKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAI 338
K G S+ + ++ + LY+K +LE A + FE + +S ++ FAQNGF EA+
Sbjct: 399 IKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEAL 458
Query: 339 QIFTRIVTLGIEVDANMVSAVLGV-FGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINM 397
++F + + S + + F S+ G++ H+ ++K + P VS+ L++M
Sbjct: 459 KMFLSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDM 518
Query: 398 YSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTF 457
Y+K G + +S +VF EM+QKN W S+I+A++ HGD + + +M +AP VTF
Sbjct: 519 YAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTF 578
Query: 458 LSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLP 517
LS+L AC+ G+V+KG E M + L P EHY+C+VDMLGRAG LKEA+ + +P
Sbjct: 579 LSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVP 638
Query: 518 ENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAG 577
G + Q++LG+C +HG+ +MG A+ + P S +V M NIY+ + +W + A
Sbjct: 639 GGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAE 698
Query: 578 AIKRMKEKGVAKEVGVSWIEIDKQVSS-----FVVGDKLHPQADIIF 619
K M++K V+KE G SWI++ S F GDK HP++D I+
Sbjct: 699 IRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIY 745
Score = 195 bits (495), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 141/501 (28%), Positives = 240/501 (47%), Gaps = 47/501 (9%)
Query: 53 GNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRD 112
G+L G IH FS S + + V N+++ MY K G +A+ +F+ + D
Sbjct: 90 GDLKRGCQIHG--------FSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPD 141
Query: 113 TVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRM 172
VSWN+++SGF N+ F +M + V FD T +T LS C G E +
Sbjct: 142 VVSWNTILSGFDDNQ---IALNFVVRMKSAGVV---FDAFTYSTALSFCVGSEGFLLGLQ 195
Query: 173 IHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNEL 232
+ V G E ++ VGN+ IT Y + G F R+VFDEM +++++W +++SGL+Q
Sbjct: 196 LQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGT 255
Query: 233 YE-DGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIES 291
+ + + +F M V + +++ S + C L R+IHGL K G +S L + +
Sbjct: 256 FGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGN 315
Query: 292 ALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEV 351
LM YSKCG LE +F E + VS T ++ + +++A+ IF + G+
Sbjct: 316 ILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRFDGVYP 370
Query: 352 DANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVF 411
+ ++ + G +IH L IK F P V N I +Y+K L D+ + F
Sbjct: 371 NEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAF 430
Query: 412 YEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACS------ 465
++T + ISWN++I+ FA++G AL+ + P + TF S+L+A +
Sbjct: 431 EDITFREIISWNAMISGFAQNGFSHEALKMFLSA-AAETMPNEYTFGSVLNAIAFAEDIS 489
Query: 466 -------HAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPE 518
HA L++ G+ ++ + ++DM + G + E++ + +
Sbjct: 490 VKQGQRCHAHLLKLGLNSCPVVS------------SALLDMYAKRGNIDESEKVFNEMSQ 537
Query: 519 NRGVLVWQALLGACSIHGDSE 539
+ VW +++ A S HGD E
Sbjct: 538 -KNQFVWTSIISAYSSHGDFE 557
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 129/463 (27%), Positives = 227/463 (49%), Gaps = 22/463 (4%)
Query: 101 AIKLFDRMPVRD-TVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLS 159
A KLFD R+ T S N IS LR FK+ + D+ TL L
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALK 86
Query: 160 ACDGPEFSSVSR--MIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNV 217
AC G + R IHG GF + V NA++ Y K G F +F+ +++ +V
Sbjct: 87 ACRG----DLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDV 142
Query: 218 VTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGL 277
V+W ++SG N++ L +M+ V + TY ++L C G + G ++
Sbjct: 143 VSWNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQST 199
Query: 278 LWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNG-FEEE 336
+ K G++SDL + ++ + +YS+ GS GA ++F+ D +S +L +Q G F E
Sbjct: 200 VVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFE 259
Query: 337 AIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLIN 396
A+ IF ++ G+E+D ++V+ T L L +QIH L IK+ + V N L++
Sbjct: 260 AVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMS 319
Query: 397 MYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVT 456
YSKCG L VF++M+++N +SW ++I++ + A+ + MR G+ P +VT
Sbjct: 320 RYSKCGVLEAVKSVFHQMSERNVVSWTTMISS-----NKDDAVSIFLNMRFDGVYPNEVT 374
Query: 457 FLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGL 516
F+ L++A +++G++ + +S S + + + + L++AK E +
Sbjct: 375 FVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNS-FITLYAKFEALEDAKKAFEDI 433
Query: 517 PENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPH 559
R ++ W A++ + +G S A ++ L+A A + P+
Sbjct: 434 T-FREIISWNAMISGFAQNGFSH----EALKMFLSAAAETMPN 471
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 205/422 (48%), Gaps = 34/422 (8%)
Query: 37 LNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCG 96
L+H +S+++ C + +L L IH IK+ + L V N L+S YSKCG
Sbjct: 274 LDHVSFTSVITTCCHETDLKLARQIHGLCIKR--------GYESLLEVGNILMSRYSKCG 325
Query: 97 ELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFD-----K 151
L+ +F +M R+ VSW +MIS N+D DA F RFD +
Sbjct: 326 VLEAVKSVFHQMSERNVVSWTTMISS---NKD-DAVSIFLNM---------RFDGVYPNE 372
Query: 152 ATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDE 211
T +++A E IHGL GF E +VGN+ IT Y K ++ F++
Sbjct: 373 VTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFED 432
Query: 212 MIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQ--ALA 269
+ R +++W A+ISG AQN + L++F ++ PN T+ S L A + + ++
Sbjct: 433 ITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVK 491
Query: 270 EGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFA 329
+G++ H L KLG+ S + SAL+D+Y+K G+++ + ++F + + T I+ A++
Sbjct: 492 QGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYS 551
Query: 330 QNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIK-KNFSQNP 388
+G E + +F +++ + D +VL + G +I +++I+ N +
Sbjct: 552 SHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSH 611
Query: 389 FVSNGLINMYSKCGELHDSLQVFYEMTQKNSISW-NSVIAAFARHGD---GSRALQFYEE 444
+ +++M + G L ++ ++ E+ S S++ + HG+ G++ + E
Sbjct: 612 EHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAME 671
Query: 445 MR 446
M+
Sbjct: 672 MK 673
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 347 bits (891), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 196/592 (33%), Positives = 316/592 (53%), Gaps = 44/592 (7%)
Query: 60 SIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSM 119
++H+RII + D ++L V L+ Y+ ++ A K+FD +P R+ + N M
Sbjct: 60 TVHSRIILE------DLRCNSSLGV--KLMRAYASLKDVASARKVFDEIPERNVIIINVM 111
Query: 120 ISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFV 179
I ++ N + G + F M R D T +L AC + R IHG
Sbjct: 112 IRSYVNNGFYGEGVKVFGTMCGCNV---RPDHYTFPCVLKACSCSGTIVIGRKIHGSATK 168
Query: 180 GGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRL 239
G + VGN L++ Y KCG + R V DEM R+VV+W +++ G AQN+ ++D L +
Sbjct: 169 VGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEV 228
Query: 240 FAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSK 299
+M +S + T S L A S + + +K+G +S
Sbjct: 229 CREMESVKISHDAGTMASLLPAVSNTTT-ENVMYVKDMFFKMGKKS-------------- 273
Query: 300 CGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAV 359
VS V++ + +N EA+++++R+ G E DA +++V
Sbjct: 274 ------------------LVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSV 315
Query: 360 LGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNS 419
L G ++L LGK+IH I +K N + N LI+MY+KCG L + VF M ++
Sbjct: 316 LPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDV 375
Query: 420 ISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVS 479
+SW ++I+A+ G G A+ + +++ G+ P + F++ L ACSHAGL+E+G
Sbjct: 376 VSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKL 435
Query: 480 MTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSE 539
MT ++++PR EH AC+VD+LGRAG +KEA FI+ + VW ALLGAC +H D++
Sbjct: 436 MTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTD 495
Query: 540 MGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEID 599
+G AAD+L AP S +VL++NIY+ G+W+E MK KG+ K G S +E++
Sbjct: 496 IGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVN 555
Query: 600 KQVSSFVVGDKLHPQADIIFLELSRLLKHLKDEGYVPDKRCILYYLDQDKKD 651
+ + +F+VGD+ HPQ+D I+ EL L+K +K+ GYVPD L+ ++++ K+
Sbjct: 556 RIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKE 607
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 170/368 (46%), Gaps = 39/368 (10%)
Query: 171 RMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQN 230
R +H + + ++G L+ +Y R+VFDE+ ERNV+ +I N
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 231 ELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIE 290
Y +G+++F M G +V P+ T+ L ACS + GRKIHG K+G+ S L +
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVG 178
Query: 291 SALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIE 350
+ L+ +Y KCG L A + + D VS ++V +AQN ++A+++ + ++ I
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS 238
Query: 351 VDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLIN--MYSKCGELHDSL 408
DA ++++L P VSN MY K
Sbjct: 239 HDAGTMASLL---------------------------PAVSNTTTENVMYVK-------- 263
Query: 409 QVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAG 468
+F++M +K+ +SWN +I + ++ A++ Y M G P V+ S+L AC
Sbjct: 264 DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTS 323
Query: 469 LVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQAL 528
+ G + + R +L P ++DM + G L++A++ E + ++R V+ W A+
Sbjct: 324 ALSLGKKIHGYIER-KKLIPNLLLENALIDMYAKCGCLEKARDVFENM-KSRDVVSWTAM 381
Query: 529 LGACSIHG 536
+ A G
Sbjct: 382 ISAYGFSG 389
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 13/121 (10%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDA 101
++S+L CG L LG IH I ++ + L + N+L+ MY+KCG L+ A
Sbjct: 312 ITSVLPACGDTSALSLGKKIHGYIERKKLIPN--------LLLENALIDMYAKCGCLEKA 363
Query: 102 IKLFDRMPVRDTVSWNSMISGF-LRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSA 160
+F+ M RD VSW +MIS + R DA F ++ +S V D T L+A
Sbjct: 364 RDVFENMKSRDVVSWTAMISAYGFSGRGCDA-VALFSKLQDSGLVP---DSIAFVTTLAA 419
Query: 161 C 161
C
Sbjct: 420 C 420
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 347 bits (891), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 208/623 (33%), Positives = 314/623 (50%), Gaps = 22/623 (3%)
Query: 35 SVLNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQ-----PPFFSFDSSRRNALFVWNSLL 89
S+L+ L LL ++ LG +HARI+K PPF + N L+
Sbjct: 2 SLLSADALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLA------------NYLI 49
Query: 90 SMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRF 149
+MYSK + A + P R+ VSW S+ISG +N F F +M V + F
Sbjct: 50 NMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDF 109
Query: 150 DKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVF 209
T A + IH L G ++ VG + Y K R++F
Sbjct: 110 ---TFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLF 166
Query: 210 DEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALA 269
DE+ ERN+ TW A IS + + + F + R PN++T+ + L ACS L
Sbjct: 167 DEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLN 226
Query: 270 EGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFA 329
G ++HGL+ + G +D+ + + L+D Y KC + + IF + VS ++ A+
Sbjct: 227 LGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYV 286
Query: 330 QNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPF 389
QN +E+A ++ R +E M+S+VL L LG+ IH+ +K + F
Sbjct: 287 QNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIF 346
Query: 390 VSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGG 449
V + L++MY KCG + DS Q F EM +KN ++ NS+I +A G AL +EEM G
Sbjct: 347 VGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRG 406
Query: 450 IAPTD--VTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLK 507
PT +TF+SLL ACS AG VE GM+ SM + + P +EHY+C+VDMLGRAG+++
Sbjct: 407 CGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVE 466
Query: 508 EAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYS 567
A FI+ +P + VW AL AC +HG ++G AA+ L P S HVL++N ++
Sbjct: 467 RAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFA 526
Query: 568 AEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLK 627
A G+W E + +K G+ K G SWI + QV +F D+ H I L++L
Sbjct: 527 AAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRN 586
Query: 628 HLKDEGYVPDKRCILYYLDQDKK 650
++ GY PD + LY L++++K
Sbjct: 587 EMEAAGYKPDLKLSLYDLEEEEK 609
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 346 bits (888), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 195/608 (32%), Positives = 329/608 (54%), Gaps = 13/608 (2%)
Query: 45 LLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKL 104
+L+ + +L LG +H +K D L V NSL++MY K + A +
Sbjct: 321 MLATAVKVDSLALGQQVHCMALK----LGLDL----MLTVSNSLINMYCKLRKFGFARTV 372
Query: 105 FDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDG- 163
FD M RD +SWNS+I+G +N F Q+ + D+ T+T++L A
Sbjct: 373 FDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGL---KPDQYTMTSVLKAASSL 429
Query: 164 PEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAV 223
PE S+S+ +H + V ALI +Y + C + +F E ++V W A+
Sbjct: 430 PEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAM 488
Query: 224 ISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGM 283
++G Q+ L+LFA M + T + C + A+ +G+++H K G
Sbjct: 489 MAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGY 548
Query: 284 QSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTR 343
DL + S ++D+Y KCG + A F+S D V+ T ++ +NG EE A +F++
Sbjct: 549 DLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQ 608
Query: 344 IVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGE 403
+ +G+ D ++ + T+L G+QIH+ +K N + +PFV L++MY+KCG
Sbjct: 609 MRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGS 668
Query: 404 LHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHA 463
+ D+ +F + N +WN+++ A+HG+G LQ +++M+ GI P VTF+ +L A
Sbjct: 669 IDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSA 728
Query: 464 CSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVL 523
CSH+GLV + + + SM D+ + P EHY+C+ D LGRAGL+K+A+N IE +
Sbjct: 729 CSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASAS 788
Query: 524 VWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMK 583
+++ LL AC + GD+E GK A +L+ P S+ +VL++N+Y+A KW E A MK
Sbjct: 789 MYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMK 848
Query: 584 EKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDEGYVPDKRCILY 643
V K+ G SWIE+ ++ FVV D+ + Q ++I+ ++ +++ +K EGYVP+ L
Sbjct: 849 GHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLV 908
Query: 644 YLDQDKKD 651
+++++K+
Sbjct: 909 DVEEEEKE 916
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/450 (25%), Positives = 221/450 (49%), Gaps = 11/450 (2%)
Query: 93 SKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKA 152
S G+++ D V + + N +S +L + + A + F M ES D+
Sbjct: 260 SDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDV---ECDQV 316
Query: 153 TLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEM 212
T ML+ + ++ + +H + G + +TV N+LI Y K F R VFD M
Sbjct: 317 TFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNM 376
Query: 213 IERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGV-QALAEG 271
ER++++W +VI+G+AQN L + + LF Q+ + P+ T S L A S + + L+
Sbjct: 377 SERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLS 436
Query: 272 RKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQN 331
+++H K+ SD + +AL+D YS+ ++ A +FE D V+ ++ + Q+
Sbjct: 437 KQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQS 495
Query: 332 GFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVS 391
+ +++F + G D ++ V G ++ GKQ+H+ IK + + +VS
Sbjct: 496 HDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS 555
Query: 392 NGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIA 451
+G+++MY KCG++ + F + + ++W ++I+ +G+ RA + +MR+ G+
Sbjct: 556 SGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVL 615
Query: 452 PTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHY--ACVVDMLGRAGLLKEA 509
P + T +L A S +E+G + + +L+ ++ + +VDM + G + +A
Sbjct: 616 PDEFTIATLAKASSCLTALEQGRQIHANAL---KLNCTNDPFVGTSLVDMYAKCGSIDDA 672
Query: 510 KNFIEGLPENRGVLVWQALLGACSIHGDSE 539
+ + E + W A+L + HG+ +
Sbjct: 673 YCLFKRI-EMMNITAWNAMLVGLAQHGEGK 701
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 130/490 (26%), Positives = 214/490 (43%), Gaps = 66/490 (13%)
Query: 54 NLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDT 113
+L LG HARI+ F + R F+ N+L+SMYSKCG L A ++FD+MP RD
Sbjct: 54 DLMLGKCTHARILT----FEENPER----FLINNLISMYSKCGSLTYARRVFDKMPDRDL 105
Query: 114 VSWNSMISGFLRN-----RDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSS 168
VSWNS+++ + ++ + F F+ + + SR TL+ ML C +
Sbjct: 106 VSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRM---TLSPMLKLCLHSGYVW 162
Query: 169 VSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLA 228
S HG G + + V AL+ Y K G +G+ +F+EM R+VV W ++
Sbjct: 163 ASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYL 222
Query: 229 QNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLC 288
+ E+ + L + ++PN +T L L SG + A
Sbjct: 223 EMGFKEEAIDLSSAFHSSGLNPNEIT-LRLLARISGDDSDA------------------- 262
Query: 289 IESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVI----LVAFAQNGFEEEAIQIFTRI 344
G + F + + VS + L + +G ++ F +
Sbjct: 263 ----------------GQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADM 306
Query: 345 VTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGEL 404
V +E D +L SL LG+Q+H + +K VSN LINMY K +
Sbjct: 307 VESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKF 366
Query: 405 HDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHAC 464
+ VF M++++ ISWNSVIA A++G A+ + ++ G+ P T S+L A
Sbjct: 367 GFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAA 426
Query: 465 SHAGLVEKGMEFLVSMTRDH--RLSPRSEHY--ACVVDMLGRAGLLKEAKNFIEGLPENR 520
S + +G+ L H +++ S+ + ++D R +KEA+ E N
Sbjct: 427 SS---LPEGLS-LSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFE--RHNF 480
Query: 521 GVLVWQALLG 530
++ W A++
Sbjct: 481 DLVAWNAMMA 490
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 121/515 (23%), Positives = 216/515 (41%), Gaps = 79/515 (15%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDA 101
LS +L +C G + S H K D FV +L+++Y K G++++
Sbjct: 148 LSPMLKLCLHSGYVWASESFHGYACK----IGLDGDE----FVAGALVNIYLKFGKVKEG 199
Query: 102 IKLFDRMPVRDTVSWNSMISGFL----RNRDFDAGFRFFKQMSESRTVYSRF------DK 151
LF+ MP RD V WN M+ +L + D F + R D
Sbjct: 200 KVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDD 259
Query: 152 ATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDE 211
+ + S +G + SSVS EI N ++ Y G
Sbjct: 260 SDAGQVKSFANGNDASSVS--------------EIIFRNKGLSEYLHSG----------- 294
Query: 212 MIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEG 271
Y L+ FA M V + +T++ L V +LA G
Sbjct: 295 --------------------QYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALG 334
Query: 272 RKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQN 331
+++H + KLG+ L + ++L+++Y K A +F++ E D +S ++ AQN
Sbjct: 335 QQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQN 394
Query: 332 GFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLP----LGKQIHSLIIKKNFSQN 387
G E EA+ +F +++ G++ D +++VL +SLP L KQ+H IK N +
Sbjct: 395 GLEVEAVCLFMQLLRCGLKPDQYTMTSVL---KAASSLPEGLSLSKQVHVHAIKINNVSD 451
Query: 388 PFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRV 447
FVS LI+ YS+ + ++ ++ +E + ++WN+++A + + DG + L+ + M
Sbjct: 452 SFVSTALIDAYSRNRCMKEA-EILFERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHK 510
Query: 448 GGIAPTDVTFLSLLHACSHAGLVEKGME---FLVSMTRDHRLSPRSEHYACVVDMLGRAG 504
G D T ++ C + +G + + + D L S ++DM + G
Sbjct: 511 QGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSG----ILDMYVKCG 566
Query: 505 LLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSE 539
+ A+ + +P V W ++ C +G+ E
Sbjct: 567 DMSAAQFAFDSIPVPDDV-AWTTMISGCIENGEEE 600
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 37/185 (20%)
Query: 367 TSLPLGKQIHSLIIKKNFSQNP--FVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNS 424
+ L LGK H+ I+ F +NP F+ N LI+MYSKCG L + +VF +M ++ +SWNS
Sbjct: 53 SDLMLGKCTHARIL--TFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNS 110
Query: 425 VIAAFARHGDG-----SRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVS 479
++AA+A+ + +A + +R + + +T +L C H+G V F
Sbjct: 111 ILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESF--- 167
Query: 480 MTRDHRLSPRSEHYAC-------------VVDMLGRAGLLKEAKNFIEGLPENRGVLVWQ 526
YAC +V++ + G +KE K E +P R V++W
Sbjct: 168 -----------HGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMP-YRDVVLWN 215
Query: 527 ALLGA 531
+L A
Sbjct: 216 LMLKA 220
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 342 bits (877), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 197/613 (32%), Positives = 328/613 (53%), Gaps = 12/613 (1%)
Query: 40 AHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQ 99
A L ++L VC R+ + LG +H +K D L + N+L+ MYSKCG +
Sbjct: 293 ATLVTVLPVCAREREIGLGKGVHGWAVK----LRLDKE----LVLNNALMDMYSKCGCIT 344
Query: 100 DAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQM-SESRTVYSRFDKATLTTML 158
+A +F ++ VSWN+M+ GF D F +QM + V + D+ T+ +
Sbjct: 345 NAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDV--KADEVTILNAV 402
Query: 159 SACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVV 218
C F + +H F V NA + SY KCG ++VF + + V
Sbjct: 403 PVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVN 462
Query: 219 TWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLL 278
+W A+I G AQ+ L QM+ + P++ T S L ACS +++L G+++HG +
Sbjct: 463 SWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFI 522
Query: 279 WKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAI 338
+ ++ DL + +++ LY CG L +F++ E+ VS ++ + QNGF + A+
Sbjct: 523 IRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRAL 582
Query: 339 QIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMY 398
+F ++V GI++ + V G + SL LG++ H+ +K + F++ LI+MY
Sbjct: 583 GVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMY 642
Query: 399 SKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFL 458
+K G + S +VF + +K++ SWN++I + HG A++ +EEM+ G P D+TFL
Sbjct: 643 AKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFL 702
Query: 459 SLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFI-EGLP 517
+L AC+H+GL+ +G+ +L M L P +HYACV+DMLGRAG L +A + E +
Sbjct: 703 GVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMS 762
Query: 518 ENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAG 577
E V +W++LL +C IH + EMG+ A +L P +VL++N+Y+ GKW++
Sbjct: 763 EEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRK 822
Query: 578 AIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDEGYVPD 637
+RM E + K+ G SWIE++++V SFVVG++ + I S L + GY PD
Sbjct: 823 VRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPD 882
Query: 638 KRCILYYLDQDKK 650
+ + L +++K
Sbjct: 883 TMSVQHDLSEEEK 895
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 162/639 (25%), Positives = 285/639 (44%), Gaps = 71/639 (11%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDA 101
L LL G+ ++ +G IH + S + RN + +++MY+ CG D+
Sbjct: 87 LGLLLQASGKRKDIEMGRKIHQLV-------SGSTRLRNDDVLCTRIITMYAMCGSPDDS 139
Query: 102 IKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSAC 161
+FD + ++ WN++IS + RN +D F +M + + D T ++ AC
Sbjct: 140 RFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP--DHFTYPCVIKAC 197
Query: 162 DGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWT 221
G + +HGLV G ++ VGNAL++ Y G Q+FD M ERN+V+W
Sbjct: 198 AGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWN 257
Query: 222 AVISGLAQNELYEDGLRLFAQMR----GGSVSPNTLTYLSSLMACSGVQALAEGRKIHGL 277
++I + N E+ L +M G+ P+ T ++ L C+ + + G+ +HG
Sbjct: 258 SMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGW 317
Query: 278 LWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEA 337
KL + +L + +ALMD+YSKCG + A IF+ + VS ++ F+ G
Sbjct: 318 AVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGT 377
Query: 338 IQIFTRIVTLGIEVDANMVSAVLGVFGV---GTSLPLGKQIHSLIIKKNFSQNPFVSNGL 394
+ +++ G +V A+ V+ +L V + LP K++H +K+ F N V+N
Sbjct: 378 FDVLRQMLAGGEDVKADEVT-ILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAF 436
Query: 395 INMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTD 454
+ Y+KCG L + +VF+ + K SWN++I A+ D +L + +M++ G+ P
Sbjct: 437 VASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDS 496
Query: 455 VTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIE 514
T SLL ACS + G E + R+ L Y V+ + G L + +
Sbjct: 497 FTVCSLLSACSKLKSLRLGKEVHGFIIRNW-LERDLFVYLSVLSLYIHCGELCTVQALFD 555
Query: 515 GLPENRGVLVW---------------------QALLGACSIHGDSEMGKFAADQLILA-- 551
+ E++ ++ W Q +L + G S M F A L+ +
Sbjct: 556 AM-EDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLR 614
Query: 552 ----APASSAPHVL---------MANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEI 598
A A + H+L + ++Y+ G + + +KEK A SW
Sbjct: 615 LGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTA-----SW--- 666
Query: 599 DKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDEGYVPD 637
++ ++G +H A E +L + ++ G+ PD
Sbjct: 667 ----NAMIMGYGIHGLAK----EAIKLFEEMQRTGHNPD 697
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 131/509 (25%), Positives = 234/509 (45%), Gaps = 13/509 (2%)
Query: 31 ATSESVLNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLS 90
+T++ + +H ++ C ++ +G ++H ++K + +FV N+L+S
Sbjct: 179 STTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVK--------TGLVEDVFVGNALVS 230
Query: 91 MYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRF- 149
Y G + DA++LFD MP R+ VSWNSMI F N + F +M E +
Sbjct: 231 FYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMP 290
Query: 150 DKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVF 209
D ATL T+L C + + +HG ++E+ + NAL+ Y KCGC + +F
Sbjct: 291 DVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIF 350
Query: 210 DEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGG--SVSPNTLTYLSSLMACSGVQA 267
+NVV+W ++ G + + QM G V + +T L+++ C
Sbjct: 351 KMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESF 410
Query: 268 LAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVA 327
L +++H K + + +A + Y+KCGSL A ++F S ++
Sbjct: 411 LPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGG 470
Query: 328 FAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQN 387
AQ+ ++ ++ G+ D+ V ++L SL LGK++H II+ ++
Sbjct: 471 HAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERD 530
Query: 388 PFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRV 447
FV ++++Y CGEL +F M K+ +SWN+VI + ++G RAL + +M +
Sbjct: 531 LFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVL 590
Query: 448 GGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLK 507
GI ++ + + ACS + G E + H L + ++DM + G +
Sbjct: 591 YGIQLCGISMMPVFGACSLLPSLRLGREAHAYALK-HLLEDDAFIACSLIDMYAKNGSIT 649
Query: 508 EAKNFIEGLPENRGVLVWQALLGACSIHG 536
++ GL E + W A++ IHG
Sbjct: 650 QSSKVFNGLKE-KSTASWNAMIMGYGIHG 677
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 342 bits (876), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 203/605 (33%), Positives = 325/605 (53%), Gaps = 26/605 (4%)
Query: 41 HLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQD 100
H +L S CGR +AR +F S+ +F +N ++ Y+K ++
Sbjct: 48 HFVNLYSKCGRLS--------YARA-------AFYSTEEPNVFSYNVIVKAYAKDSKIHI 92
Query: 101 AIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSA 160
A +LFD +P DTVS+N++ISG+ R+ A FK+M R + D TL+ +++A
Sbjct: 93 ARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRM---RKLGFEVDGFTLSGLIAA 149
Query: 161 CDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIE-RNVVT 219
C + + + +H GGF+ +V NA +T Y K G + VF M E R+ V+
Sbjct: 150 C--CDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVS 207
Query: 220 WTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLW 279
W ++I Q++ L L+ +M + T S L A + + L GR+ HG L
Sbjct: 208 WNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLI 267
Query: 280 KLGMQSDLCIESALMDLYSKCGSLEGAW---QIFESAEELDGVSLTVILVAFAQNG-FEE 335
K G + + S L+D YSKCG +G + ++F+ D V ++ ++ N E
Sbjct: 268 KAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSE 327
Query: 336 EAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPF-VSNGL 394
EA++ F ++ +G D V +S KQIH L IK + N V+N L
Sbjct: 328 EAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNAL 387
Query: 395 INMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTD 454
I++Y K G L D+ VF M + N++S+N +I +A+HG G+ AL Y+ M GIAP
Sbjct: 388 ISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNK 447
Query: 455 VTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIE 514
+TF+++L AC+H G V++G E+ +M ++ P +EHY+C++D+LGRAG L+EA+ FI+
Sbjct: 448 ITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFID 507
Query: 515 GLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKE 574
+P G + W ALLGAC H + + + AA++L++ P ++ P+V++AN+Y+ KW+E
Sbjct: 508 AMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEE 567
Query: 575 RAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDEGY 634
A K M+ K + K+ G SWIE+ K+ FV D HP + L ++K +K GY
Sbjct: 568 MASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGY 627
Query: 635 VPDKR 639
V DK+
Sbjct: 628 VMDKK 632
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 175/390 (44%), Gaps = 42/390 (10%)
Query: 171 RMIHGLVFVGGFEREITVGNALITSYFKCGCFCQ-------------------------- 204
+ +H L + N + Y KCG
Sbjct: 28 KSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKD 87
Query: 205 -----GRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSL 259
RQ+FDE+ + + V++ +ISG A + LF +MR + T LS L
Sbjct: 88 SKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFT-LSGL 146
Query: 260 MA--CSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEEL- 316
+A C V + +++H G S + +A + YSK G L A +F +EL
Sbjct: 147 IAACCDRVDLI---KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELR 203
Query: 317 DGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIH 376
D VS ++VA+ Q+ +A+ ++ ++ G ++D +++VL L G+Q H
Sbjct: 204 DEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFH 263
Query: 377 SLIIKKNFSQNPFVSNGLINMYSKCG---ELHDSLQVFYEMTQKNSISWNSVIAAFARHG 433
+IK F QN V +GLI+ YSKCG ++DS +VF E+ + + WN++I+ ++ +
Sbjct: 264 GKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNE 323
Query: 434 DGS-RALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEH 492
+ S A++ + +M+ G P D +F+ + ACS+ + + + H S R
Sbjct: 324 ELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISV 383
Query: 493 YACVVDMLGRAGLLKEAKNFIEGLPENRGV 522
++ + ++G L++A+ + +PE V
Sbjct: 384 NNALISLYYKSGNLQDARWVFDRMPELNAV 413
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 36/198 (18%)
Query: 372 GKQIHSLIIKKNFSQNPFVSNGLINMYSKCGEL--------------------------- 404
GK +H+L +K + + ++SN +N+YSKCG L
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAK 86
Query: 405 ----HDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSL 460
H + Q+F E+ Q +++S+N++I+ +A + A+ ++ MR G T L
Sbjct: 87 DSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGL 146
Query: 461 LHA-CSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPEN 519
+ A C L+++ F VS D S + V + GLL+EA + G+ E
Sbjct: 147 IAACCDRVDLIKQLHCFSVSGGFDSYSSVNN----AFVTYYSKGGLLREAVSVFYGMDEL 202
Query: 520 RGVLVWQALLGACSIHGD 537
R + W +++ A H +
Sbjct: 203 RDEVSWNSMIVAYGQHKE 220
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 341 bits (874), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 194/589 (32%), Positives = 316/589 (53%), Gaps = 13/589 (2%)
Query: 46 LSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLF 105
L C + N G IH ++K N +V SLLSMYSKCG + +A +F
Sbjct: 279 LGACSQSENSGFGRQIHCDVVKM--------GLHNDPYVCTSLLSMYSKCGMVGEAETVF 330
Query: 106 DRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPE 165
+ + WN+M++ + N + F M + + F TL+ ++S C
Sbjct: 331 SCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSF---TLSNVISCCSVLG 387
Query: 166 FSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVIS 225
+ + +H +F + T+ +AL+T Y KCGC VF M E+++V W ++IS
Sbjct: 388 LYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLIS 447
Query: 226 GLAQNELYEDGLRLFAQMRGG--SVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGM 283
GL +N +++ L++F M+ S+ P++ S AC+G++AL G ++HG + K G+
Sbjct: 448 GLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGL 507
Query: 284 QSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTR 343
++ + S+L+DLYSKCG E A ++F S + V+ ++ +++N E +I +F
Sbjct: 508 VLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNL 567
Query: 344 IVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGE 403
+++ GI D+ +++VL SL GK +H ++ + + N LI+MY KCG
Sbjct: 568 MLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGF 627
Query: 404 LHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHA 463
+ +F +M K+ I+WN +I + HGD AL ++EM+ G +P DVTFLSL+ A
Sbjct: 628 SKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISA 687
Query: 464 CSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVL 523
C+H+G VE+G M +D+ + P EHYA +VD+LGRAGLL+EA +FI+ +P
Sbjct: 688 CNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSS 747
Query: 524 VWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMK 583
+W LL A H + E+G +A++L+ P + +V + N+Y G E A + MK
Sbjct: 748 IWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMK 807
Query: 584 EKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDE 632
EKG+ K+ G SWIE+ + + F G P IF L+RL ++ DE
Sbjct: 808 EKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRLKSNMVDE 856
Score = 199 bits (506), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 145/502 (28%), Positives = 257/502 (51%), Gaps = 20/502 (3%)
Query: 42 LSSLLSVCGRDGNLHL--GSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQ 99
LS ++SV ++GN G IH +++ S D+ F+ +L+ MY K G
Sbjct: 171 LSIVVSVMCKEGNFRREEGKQIHGFMLRN----SLDTDS----FLKTALIDMYFKFGLSI 222
Query: 100 DAIKLFDRMPVR-DTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTML 158
DA ++F + + + V WN MI GF + ++ + ++++ +V + + T L
Sbjct: 223 DAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLY-MLAKNNSV--KLVSTSFTGAL 279
Query: 159 SACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVV 218
AC E S R IH V G + V +L++ Y KCG + VF ++++ +
Sbjct: 280 GACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLE 339
Query: 219 TWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAE-GRKIHGL 277
W A+++ A+N+ L LF MR SV P++ T LS++++C V L G+ +H
Sbjct: 340 IWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFT-LSNVISCCSVLGLYNYGKSVHAE 398
Query: 278 LWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEA 337
L+K +QS IESAL+ LYSKCG A+ +F+S EE D V+ ++ +NG +EA
Sbjct: 399 LFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEA 458
Query: 338 IQIFTRIV--TLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLI 395
+++F + ++ D++++++V +L G Q+H +IK N FV + LI
Sbjct: 459 LKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLI 518
Query: 396 NMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDV 455
++YSKCG +L+VF M+ +N ++WNS+I+ ++R+ ++ + M GI P V
Sbjct: 519 DLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSV 578
Query: 456 TFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEG 515
+ S+L A S + KG + L T + + ++DM + G K A+N +
Sbjct: 579 SITSVLVAISSTASLLKG-KSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKK 637
Query: 516 LPENRGVLVWQALLGACSIHGD 537
+ +++ ++ W ++ HGD
Sbjct: 638 M-QHKSLITWNLMIYGYGSHGD 658
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 134/504 (26%), Positives = 237/504 (47%), Gaps = 29/504 (5%)
Query: 44 SLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIK 103
SLL C NL G +IH ++ R F+ SL++MY KCG L A++
Sbjct: 65 SLLKACSALTNLSYGKTIHGSVVVL--------GWRYDPFIATSLVNMYVKCGFLDYAVQ 116
Query: 104 LFDR-------MPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYS-RFDKATLT 155
+FD + RD WNSMI G+ + R F G F++M V+ R D +L+
Sbjct: 117 VFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRM----LVFGVRPDAFSLS 172
Query: 156 TMLSA-CDGPEF-SSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMI 213
++S C F + IHG + + + + ALI YFK G +VF E+
Sbjct: 173 IVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIE 232
Query: 214 ER-NVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGR 272
++ NVV W +I G + + E L L+ + SV + ++ +L ACS + GR
Sbjct: 233 DKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGR 292
Query: 273 KIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNG 332
+IH + K+G+ +D + ++L+ +YSKCG + A +F + ++ A+A+N
Sbjct: 293 QIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAEND 352
Query: 333 FEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSN 392
+ A+ +F + + D+ +S V+ V GK +H+ + K+ + +
Sbjct: 353 YGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIES 412
Query: 393 GLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMR--VGGI 450
L+ +YSKCG D+ VF M +K+ ++W S+I+ ++G AL+ + +M+ +
Sbjct: 413 ALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSL 472
Query: 451 APTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEA- 509
P S+ +AC+ + G++ SM + L + ++D+ + GL + A
Sbjct: 473 KPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTG-LVLNVFVGSSLIDLYSKCGLPEMAL 531
Query: 510 KNFIEGLPENRGVLVWQALLGACS 533
K F EN ++ W +++ S
Sbjct: 532 KVFTSMSTEN--MVAWNSMISCYS 553
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 179/372 (48%), Gaps = 21/372 (5%)
Query: 123 FLRNRDFDAGFRFFKQMSE---SRTVYSRFDKA--------TLTTMLSACDGPEFSSVSR 171
++ ++G R Q E + +YS+ D + T ++L AC S +
Sbjct: 21 YISPASINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGK 80
Query: 172 MIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIE-------RNVVTWTAVI 224
IHG V V G+ + + +L+ Y KCG QVFD + R+V W ++I
Sbjct: 81 TIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMI 140
Query: 225 SGLAQNELYEDGLRLFAQMRGGSVSPN--TLTYLSSLMACSGVQALAEGRKIHGLLWKLG 282
G + +++G+ F +M V P+ +L+ + S+M G EG++IHG + +
Sbjct: 141 DGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNS 200
Query: 283 MQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSL-TVILVAFAQNGFEEEAIQIF 341
+ +D +++AL+D+Y K G AW++F E+ V L V++V F +G E ++ ++
Sbjct: 201 LDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLY 260
Query: 342 TRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKC 401
+++ + + LG + G+QIH ++K +P+V L++MYSKC
Sbjct: 261 MLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKC 320
Query: 402 GELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLL 461
G + ++ VF + K WN+++AA+A + G AL + MR + P T +++
Sbjct: 321 GMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVI 380
Query: 462 HACSHAGLVEKG 473
CS GL G
Sbjct: 381 SCCSVLGLYNYG 392
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 160/336 (47%), Gaps = 20/336 (5%)
Query: 224 ISGLAQNELYEDGLRLFAQMRGGS-VSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLG 282
I L Q Y L L+++ G S + T+ S L ACS + L+ G+ IHG + LG
Sbjct: 31 IRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLG 90
Query: 283 MQSDLCIESALMDLYSKCGSLEGAWQIFES-AEELDGVSLTVILV--AFAQNGFE----E 335
+ D I ++L+++Y KCG L+ A Q+F+ ++ GVS + V + F+ +
Sbjct: 91 WRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFK 150
Query: 336 EAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSL--PLGKQIHSLIIKKNFSQNPFVSNG 393
E + F R++ G+ DA +S V+ V + GKQIH +++ + + F+
Sbjct: 151 EGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTA 210
Query: 394 LINMYSKCGELHDSLQVFYEMTQK-NSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAP 452
LI+MY K G D+ +VF E+ K N + WN +I F G +L Y + +
Sbjct: 211 LIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKL 270
Query: 453 TDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYAC--VVDMLGRAGLLKEAK 510
+F L ACS + G + + ++ ++ Y C ++ M + G++ EA+
Sbjct: 271 VSTSFTGALGACSQSENSGFGRQIHCDVV---KMGLHNDPYVCTSLLSMYSKCGMVGEAE 327
Query: 511 NFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAAD 546
+ + R + +W A++ A + +++ G A D
Sbjct: 328 TVFSCVVDKR-LEIWNAMVAA---YAENDYGYSALD 359
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 340 bits (872), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 194/573 (33%), Positives = 311/573 (54%), Gaps = 11/573 (1%)
Query: 82 LFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQM-S 140
L + ++++ MY K ++DA K+FDRMP +DT+ WN+MISG+ +N + + F+ + +
Sbjct: 154 LLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLIN 213
Query: 141 ESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCG 200
ES T R D TL +L A + + IH L G V I+ Y KCG
Sbjct: 214 ESCT---RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCG 270
Query: 201 CFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQM--RGGSVSPNTLTYLSS 258
G +F E + ++V + A+I G N E L LF ++ G + +TL S
Sbjct: 271 KIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLV---S 327
Query: 259 LMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDG 318
L+ SG L IHG K S + +AL +YSK +E A ++F+ + E
Sbjct: 328 LVPVSGHLMLIYA--IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSL 385
Query: 319 VSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSL 378
S ++ + QNG E+AI +F + + ++ +L +L LGK +H L
Sbjct: 386 PSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDL 445
Query: 379 IIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRA 438
+ +F + +VS LI MY+KCG + ++ ++F MT+KN ++WN++I+ + HG G A
Sbjct: 446 VRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEA 505
Query: 439 LQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVD 498
L + EM GI PT VTFL +L+ACSHAGLV++G E SM + P +HYAC+VD
Sbjct: 506 LNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVD 565
Query: 499 MLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAP 558
+LGRAG L+ A FIE + G VW+ LLGAC IH D+ + + +++L P +
Sbjct: 566 ILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGY 625
Query: 559 HVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADII 618
HVL++NI+SA+ + + A + K++ +AK G + IEI + F GD+ HPQ I
Sbjct: 626 HVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEI 685
Query: 619 FLELSRLLKHLKDEGYVPDKRCILYYLDQDKKD 651
+ +L +L +++ GY P+ L+ +++++++
Sbjct: 686 YEKLEKLEGKMREAGYQPETELALHDVEEEERE 718
Score = 172 bits (435), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 116/462 (25%), Positives = 217/462 (46%), Gaps = 8/462 (1%)
Query: 79 RNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQ 138
RN + + L S G + A +F + D +N ++ GF N + F
Sbjct: 49 RNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAH 108
Query: 139 MSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFK 198
+ +S + + + +T +SA G R+IHG V G + E+ +G+ ++ YFK
Sbjct: 109 LRKSTDL--KPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFK 166
Query: 199 CGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSP-NTLTYLS 257
R+VFD M E++ + W +ISG +NE+Y + +++F + S + +T T L
Sbjct: 167 FWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLD 226
Query: 258 SLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELD 317
L A + +Q L G +IH L K G S + + + LYSKCG ++ +F + D
Sbjct: 227 ILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPD 286
Query: 318 GVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHS 377
V+ ++ + NG E ++ +F ++ G + ++ + +++ V G L L IH
Sbjct: 287 IVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSG---HLMLIYAIHG 343
Query: 378 LIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSR 437
+K NF + VS L +YSK E+ + ++F E +K+ SWN++I+ + ++G
Sbjct: 344 YCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTED 403
Query: 438 ALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVV 497
A+ + EM+ +P VT +L AC+ G + G +++ + R ++
Sbjct: 404 AISLFREMQKSEFSPNPVTITCILSACAQLGALSLG-KWVHDLVRSTDFESSIYVSTALI 462
Query: 498 DMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSE 539
M + G + EA+ + L + + W ++ +HG +
Sbjct: 463 GMYAKCGSIAEARRLFD-LMTKKNEVTWNTMISGYGLHGQGQ 503
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 99/229 (43%), Gaps = 32/229 (13%)
Query: 11 LPSWVDSLK-------SKAPISQYPFPATSESVLNHAHLSSLLSVCGRDGNLHLGSSIHA 63
LPSW + ++ IS + SE N ++ +LS C + G L LG +H
Sbjct: 385 LPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVH- 443
Query: 64 RIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGF 123
+++ F S +++V +L+ MY+KCG + +A +LFD M ++ V+WN+MISG+
Sbjct: 444 DLVRSTDFES-------SIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGY 496
Query: 124 LRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSAC-------DGPEFSSVSRMIHGL 176
+ F +M S + T +L AC +G E + MIH
Sbjct: 497 GLHGQGQEALNIFYEMLNSGITPT---PVTFLCVLYACSHAGLVKEGDEI--FNSMIHRY 551
Query: 177 VFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEM-IERNVVTWTAVI 224
GFE + ++ + G + Q + M IE W ++
Sbjct: 552 ----GFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLL 596
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 339 bits (869), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 192/597 (32%), Positives = 322/597 (53%), Gaps = 25/597 (4%)
Query: 44 SLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIK 103
S++ C ++ LG +HA++IK +SS L N+L++MY + ++ DA +
Sbjct: 173 SIIKACASSSDVGLGKQLHAQVIK------LESSSH--LIAQNALIAMYVRFNQMSDASR 224
Query: 104 LFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYS----RFDKATLTTMLS 159
+F +P++D +SW+S+I+GF + GF F + +S + + S ++ + L
Sbjct: 225 VFYGIPMKDLISWSSIIAGFSQ-----LGFEF-EALSHLKEMLSFGVFHPNEYIFGSSLK 278
Query: 160 ACDG---PEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERN 216
AC P++ S IHGL G +L Y +CG R+VFD++ +
Sbjct: 279 ACSSLLRPDYGS---QIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPD 335
Query: 217 VVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHG 276
+W +I+GLA N ++ + +F+QMR P+ ++ S L A + AL++G +IH
Sbjct: 336 TASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHS 395
Query: 277 LLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFES-AEELDGVSLTVILVAFAQNGFEE 335
+ K G +DL + ++L+ +Y+ C L + +FE D VS IL A Q+
Sbjct: 396 YIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPV 455
Query: 336 EAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLI 395
E +++F ++ E D + +L +SL LG Q+H +K + F+ NGLI
Sbjct: 456 EMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLI 515
Query: 396 NMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDV 455
+MY+KCG L + ++F M ++ +SW+++I +A+ G G AL ++EM+ GI P V
Sbjct: 516 DMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHV 575
Query: 456 TFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEG 515
TF+ +L ACSH GLVE+G++ +M +H +SP EH +CVVD+L RAG L EA+ FI+
Sbjct: 576 TFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDE 635
Query: 516 LPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKER 575
+ V+VW+ LL AC G+ + + AA+ ++ P +S HVL+ +++++ G W+
Sbjct: 636 MKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENA 695
Query: 576 AGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDE 632
A MK+ V K G SWIEI+ ++ F D HP+ D I+ L + + DE
Sbjct: 696 ALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQMLDE 752
Score = 205 bits (522), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 154/575 (26%), Positives = 268/575 (46%), Gaps = 26/575 (4%)
Query: 1 MKSGRKFNTHLPSWVDSLKSKAPISQYPFPATSESV-LNHAHLSSLLSVCGRDGNLHLGS 59
+K+ N H+ S S + + + F + S + SL+ C +L G
Sbjct: 28 IKTEELMNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGR 87
Query: 60 SIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSM 119
IH I+ +S+ + + N +LSMY KCG L+DA ++FD MP R+ VS+ S+
Sbjct: 88 KIHDHIL--------NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSV 139
Query: 120 ISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFV 179
I+G+ +N R + +M + V +F +++ AC + + +H V
Sbjct: 140 ITGYSQNGQGAEAIRLYLKMLQEDLVPDQF---AFGSIIKACASSSDVGLGKQLHAQVIK 196
Query: 180 GGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRL 239
+ NALI Y + +VF + +++++W+++I+G +Q + L
Sbjct: 197 LESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSH 256
Query: 240 FAQMRG-GSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYS 298
+M G PN + SSL ACS + G +IHGL K + + +L D+Y+
Sbjct: 257 LKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYA 316
Query: 299 KCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSA 358
+CG L A ++F+ E D S VI+ A NG+ +EA+ +F+++ + G DA + +
Sbjct: 317 RCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRS 376
Query: 359 VLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEM-TQK 417
+L +L G QIHS IIK F + V N L+ MY+ C +L+ +F +
Sbjct: 377 LLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNA 436
Query: 418 NSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFL 477
+S+SWN+++ A +H L+ ++ M V P +T +LL C ++ G + +
Sbjct: 437 DSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQ-V 495
Query: 478 VSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGD 537
+ L+P ++DM + G L +A+ + + +NR V+ W L I G
Sbjct: 496 HCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSM-DNRDVVSWSTL-----IVGY 549
Query: 538 SEMGKFAADQLILAAPASSA----PHVLMANIYSA 568
++ G F + LIL SA HV + +A
Sbjct: 550 AQSG-FGEEALILFKEMKSAGIEPNHVTFVGVLTA 583
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 337 bits (865), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 193/574 (33%), Positives = 311/574 (54%), Gaps = 13/574 (2%)
Query: 82 LFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSE 141
++V SL+ +YS+ + +A LFD MPVRD SWN+MISG+ ++ + +
Sbjct: 185 VYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRA 244
Query: 142 SRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGC 201
D T+ ++LSAC + IH G E E+ V N LI Y + G
Sbjct: 245 -------MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGR 297
Query: 202 FCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMA 261
++VFD M R++++W ++I NE + LF +MR + P+ LT +S
Sbjct: 298 LRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASI 357
Query: 262 CSGVQALAEGRKIHGLLWKLG-MQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVS 320
S + + R + G + G D+ I +A++ +Y+K G ++ A +F D +S
Sbjct: 358 LSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVIS 417
Query: 321 LTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVS--AVLGVFGVGTSLPLGKQIHSL 378
I+ +AQNGF EAI+++ + G E+ AN + +VL +L G ++H
Sbjct: 418 WNTIISGYAQNGFASEAIEMYNIMEEEG-EIAANQGTWVSVLPACSQAGALRQGMKLHGR 476
Query: 379 IIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRA 438
++K + FV L +MY KCG L D+L +FY++ + NS+ WN++IA HG G +A
Sbjct: 477 LLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKA 536
Query: 439 LQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVD 498
+ ++EM G+ P +TF++LL ACSH+GLV++G M D+ ++P +HY C+VD
Sbjct: 537 VMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVD 596
Query: 499 MLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAP 558
M GRAG L+ A FI+ + +W ALL AC +HG+ ++GK A++ L P
Sbjct: 597 MYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGY 656
Query: 559 HVLMANIYSAEGKWKERAGAIKRMKE-KGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADI 617
HVL++N+Y++ GKW E I+ + KG+ K G S +E+D +V F G++ HP +
Sbjct: 657 HVLLSNMYASAGKW-EGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEE 715
Query: 618 IFLELSRLLKHLKDEGYVPDKRCILYYLDQDKKD 651
++ EL+ L LK GYVPD R +L ++ D+K+
Sbjct: 716 MYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKE 749
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 115/396 (29%), Positives = 199/396 (50%), Gaps = 17/396 (4%)
Query: 44 SLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIK 103
SLLS C G+ + G +IH+ IK + LFV N L+ +Y++ G L+D K
Sbjct: 252 SLLSACTEAGDFNRGVTIHSYSIKH--------GLESELFVSNKLIDLYAEFGRLRDCQK 303
Query: 104 LFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDG 163
+FDRM VRD +SWNS+I + N F++M SR + D TL ++ S
Sbjct: 304 VFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRI---QPDCLTLISLASILSQ 360
Query: 164 PEFSSVSRMIHGLVFVGG-FEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTA 222
R + G G F +IT+GNA++ Y K G R VF+ + +V++W
Sbjct: 361 LGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNT 420
Query: 223 VISGLAQNELYEDGLRLFAQM-RGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKL 281
+ISG AQN + + ++ M G ++ N T++S L ACS AL +G K+HG L K
Sbjct: 421 IISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN 480
Query: 282 GMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIF 341
G+ D+ + ++L D+Y KCG LE A +F ++ V ++ +G E+A+ +F
Sbjct: 481 GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLF 540
Query: 342 TRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSN--GLINMYS 399
++ G++ D +L + G+ + ++ ++ P + + +++MY
Sbjct: 541 KEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEM-MQTDYGITPSLKHYGCMVDMYG 599
Query: 400 KCGELHDSLQVFYEMT-QKNSISWNSVIAAFARHGD 434
+ G+L +L+ M+ Q ++ W ++++A HG+
Sbjct: 600 RAGQLETALKFIKSMSLQPDASIWGALLSACRVHGN 635
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 137/533 (25%), Positives = 240/533 (45%), Gaps = 39/533 (7%)
Query: 54 NLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDT 113
NL +HAR++ S + + + L+++Y G + A FD + RD
Sbjct: 66 NLQSAKCLHARLVV--------SKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDV 117
Query: 114 VSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSAC----DGPEFSSV 169
+WN MISG+ R + R F S + D T ++L AC DG +
Sbjct: 118 YAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTP--DYRTFPSVLKACRTVIDGNK---- 171
Query: 170 SRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQ 229
IH L GF ++ V +LI Y + R +FDEM R++ +W A+ISG Q
Sbjct: 172 ---IHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQ 228
Query: 230 NELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCI 289
+ ++ L L +R + +++T +S L AC+ G IH K G++S+L +
Sbjct: 229 SGNAKEALTLSNGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFV 284
Query: 290 ESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGI 349
+ L+DLY++ G L ++F+ D +S I+ A+ N AI +F + I
Sbjct: 285 SNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRI 344
Query: 350 EVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKN-FSQNPFVSNGLINMYSKCGELHDSL 408
+ D + ++ + + + + ++K F ++ + N ++ MY+K G + +
Sbjct: 345 QPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSAR 404
Query: 409 QVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEM-RVGGIAPTDVTFLSLLHACSHA 467
VF + + ISWN++I+ +A++G S A++ Y M G IA T++S+L ACS A
Sbjct: 405 AVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQA 464
Query: 468 GLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQA 527
G + +GM+ + ++ L + DM G+ G L++A + +P V W
Sbjct: 465 GALRQGMKLHGRLLKN-GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSV-PWNT 522
Query: 528 LLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSA--------EGKW 572
L+ HG E +++ H+ + SA EG+W
Sbjct: 523 LIACHGFHGHGEKAVMLFKEML--DEGVKPDHITFVTLLSACSHSGLVDEGQW 573
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 333 bits (855), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 196/624 (31%), Positives = 324/624 (51%), Gaps = 31/624 (4%)
Query: 10 HLPSWVDSLKSKAPISQYPFPATSESVLNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQP 69
H WV +K Y FP +L CG +L G +H +++
Sbjct: 184 HRMLWVGGVKPDV----YTFPC-------------VLRTCGGIPDLARGKEVHVHVVRYG 226
Query: 70 PFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDF 129
D V N+L++MY KCG+++ A LFDRMP RD +SWN+MISG+ N
Sbjct: 227 YELDID--------VVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMC 278
Query: 130 DAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVG 189
G F M R + D TLT+++SAC+ + R IH V GF +I+V
Sbjct: 279 HEGLELFFAM---RGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVC 335
Query: 190 NALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVS 249
N+L Y G + + ++F M +++V+WT +ISG N L + + + M SV
Sbjct: 336 NSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVK 395
Query: 250 PNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQI 309
P+ +T + L AC+ + L G ++H L K + S + + + L+++YSKC ++ A I
Sbjct: 396 PDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDI 455
Query: 310 FESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSL 369
F + + +S T I+ N EA+ IF R + + ++ +A ++A L +L
Sbjct: 456 FHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIGAL 514
Query: 370 PLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAF 429
GK+IH+ +++ + F+ N L++MY +CG ++ + F +K+ SWN ++ +
Sbjct: 515 MCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQF-NSQKKDVTSWNILLTGY 573
Query: 430 ARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPR 489
+ G GS ++ ++ M + P ++TF+SLL CS + +V +G+ + M D+ ++P
Sbjct: 574 SERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPN 632
Query: 490 SEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLI 549
+HYACVVD+LGRAG L+EA FI+ +P VW ALL AC IH ++G+ +A +
Sbjct: 633 LKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIF 692
Query: 550 LAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGD 609
S ++L+ N+Y+ GKW+E A + MKE G+ + G SW+E+ +V +F+ D
Sbjct: 693 ELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDD 752
Query: 610 KLHPQADIIFLELSRLLKHLKDEG 633
K HPQ I L + + + G
Sbjct: 753 KYHPQTKEINTVLEGFYEKMSEVG 776
Score = 198 bits (504), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 118/362 (32%), Positives = 183/362 (50%), Gaps = 2/362 (0%)
Query: 86 NSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTV 145
N+ L+M+ + G L DA +F +M R+ SWN ++ G+ + FD + +M V
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 146 YSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQG 205
+ D T +L C G + + +H V G+E +I V NALIT Y KCG
Sbjct: 193 --KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSA 250
Query: 206 RQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGV 265
R +FD M R++++W A+ISG +N + +GL LF MRG SV P+ +T S + AC +
Sbjct: 251 RLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELL 310
Query: 266 QALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVIL 325
GR IH + G D+ + ++L +Y GS A ++F E D VS T ++
Sbjct: 311 GDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMI 370
Query: 326 VAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFS 385
+ N ++AI + + ++ D V+AVL L G ++H L IK
Sbjct: 371 SGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLI 430
Query: 386 QNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEM 445
V+N LINMYSKC + +L +F+ + +KN ISW S+IA + AL F +M
Sbjct: 431 SYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM 490
Query: 446 RV 447
++
Sbjct: 491 KM 492
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/419 (21%), Positives = 195/419 (46%), Gaps = 18/419 (4%)
Query: 120 ISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFV 179
+ G N + + M E R D+ ++ C+ ++ +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVA---VDEDVFVALVRLCEWKRAQEEGSKVYSIALS 122
Query: 180 GGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRL 239
+ +GNA + + + G VF +M ERN+ +W ++ G A+ +++ + L
Sbjct: 123 SMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCL 182
Query: 240 FAQMRG-GSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYS 298
+ +M G V P+ T+ L C G+ LA G+++H + + G + D+ + +AL+ +Y
Sbjct: 183 YHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYV 242
Query: 299 KCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSA 358
KCG ++ A +F+ D +S ++ + +NG E +++F + L ++ D +++
Sbjct: 243 KCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTS 302
Query: 359 VLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKN 418
V+ + LG+ IH+ +I F+ + V N L MY G ++ ++F M +K+
Sbjct: 303 VISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKD 362
Query: 419 SISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLV 478
+SW ++I+ + + +A+ Y M + P ++T ++L AC+ G ++ G+E
Sbjct: 363 IVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVEL-- 420
Query: 479 SMTRDHRLSPRSEHYACV------VDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGA 531
H+L+ ++ + V ++M + + +A + +P + V+ W +++
Sbjct: 421 -----HKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPR-KNVISWTSIIAG 473
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 333 bits (853), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 185/553 (33%), Positives = 297/553 (53%), Gaps = 15/553 (2%)
Query: 50 GRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMP 109
G ++ LG +H RI++ +F D +V N+LL+MY G+++ A +FD M
Sbjct: 128 GELKSMKLGLVVHGRILRS--WFGRDK------YVQNALLAMYMNFGKVEMARDVFDVMK 179
Query: 110 VRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSV 169
RD +SWN+MISG+ RN + F M D AT+ +ML C + +
Sbjct: 180 NRDVISWNTMISGYYRNGYMNDALMMFDWMVNESV---DLDHATIVSMLPVCGHLKDLEM 236
Query: 170 SRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQ 229
R +H LV +I V NAL+ Y KCG + R VFD M R+V+TWT +I+G +
Sbjct: 237 GRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTE 296
Query: 230 NELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCI 289
+ E+ L L M+ V PN +T S + C + +G+ +HG + + SD+ I
Sbjct: 297 DGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIII 356
Query: 290 ESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGI 349
E++L+ +Y+KC ++ +++F A + + I+ QN +A+ +F R+ +
Sbjct: 357 ETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDV 416
Query: 350 EVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQ 409
E + ++++L + L IH + K F + + GL+++YSKCG L + +
Sbjct: 417 EPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHK 476
Query: 410 VFYEMTQKNS----ISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACS 465
+F + +K+ + W ++I+ + HGDG ALQ + EM G+ P ++TF S L+ACS
Sbjct: 477 IFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACS 536
Query: 466 HAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVW 525
H+GLVE+G+ M ++ RS HY C+VD+LGRAG L EA N I +P VW
Sbjct: 537 HSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVW 596
Query: 526 QALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEK 585
ALL AC H + ++G+ AA++L P ++ +VL+ANIY+A G+WK+ M+
Sbjct: 597 GALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENV 656
Query: 586 GVAKEVGVSWIEI 598
G+ K+ G S IEI
Sbjct: 657 GLRKKPGHSTIEI 669
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 117/457 (25%), Positives = 221/457 (48%), Gaps = 5/457 (1%)
Query: 84 VWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESR 143
+ ++L Y+ CG + A KLF+ MP +S+N +I ++R + F +M S
Sbjct: 51 ILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMV-SE 109
Query: 144 TVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFC 203
V D T + A + + ++HG + F R+ V NAL+ Y G
Sbjct: 110 GVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVE 169
Query: 204 QGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACS 263
R VFD M R+V++W +ISG +N D L +F M SV + T +S L C
Sbjct: 170 MARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCG 229
Query: 264 GVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTV 323
++ L GR +H L+ + + + +++AL+++Y KCG ++ A +F+ E D ++ T
Sbjct: 230 HLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTC 289
Query: 324 ILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKN 383
++ + ++G E A+++ + G+ +A +++++ V G + GK +H +++
Sbjct: 290 MINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQ 349
Query: 384 FSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYE 443
+ + LI+MY+KC + +VF ++ ++ W+++IA ++ S AL ++
Sbjct: 350 VYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFK 409
Query: 444 EMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRA 503
MR + P T SLL A + + + M +T+ +S +V + +
Sbjct: 410 RMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATG-LVHVYSKC 468
Query: 504 GLLKEAKNFIEGLPE---NRGVLVWQALLGACSIHGD 537
G L+ A G+ E ++ V++W AL+ +HGD
Sbjct: 469 GTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGD 505
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 199/413 (48%), Gaps = 28/413 (6%)
Query: 32 TSESV-LNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLS 90
+ESV L+HA + S+L VCG +L +G ++H +++++ + + V N+L++
Sbjct: 210 VNESVDLDHATIVSMLPVCGHLKDLEMGRNVH-KLVEEKRL-------GDKIEVKNALVN 261
Query: 91 MYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFD 150
MY KCG + +A +FDRM RD ++W MI+G+ + D + + M R +
Sbjct: 262 MYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGV---RPN 318
Query: 151 KATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCG----CFCQGR 206
T+ +++S C + + +HG +I + +LI+ Y KC CF
Sbjct: 319 AVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCF---- 374
Query: 207 QVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQ 266
+VF + + W+A+I+G QNEL D L LF +MR V PN T S L A + +
Sbjct: 375 RVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALA 434
Query: 267 ALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEE----LDGVSLT 322
L + IH L K G S L + L+ +YSKCG+LE A +IF +E D V
Sbjct: 435 DLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWG 494
Query: 323 VILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIK- 381
++ + +G A+Q+F +V G+ + ++ L + G + +++
Sbjct: 495 ALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEH 554
Query: 382 -KNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMT-QKNSISWNSVIAAFARH 432
K +++ + ++++ + G L ++ + + + S W +++AA H
Sbjct: 555 YKTLARSNHYT-CIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTH 606
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 153/308 (49%), Gaps = 3/308 (0%)
Query: 168 SVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGL 227
S ++ +H V GG + + L +Y CG R++F+EM + +++++ VI
Sbjct: 32 SKTKALHCHVITGG-RVSGHILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMY 90
Query: 228 AQNELYEDGLRLFAQM--RGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQS 285
+ LY D + +F +M G P+ TY A ++++ G +HG + +
Sbjct: 91 VREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGR 150
Query: 286 DLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIV 345
D +++AL+ +Y G +E A +F+ + D +S ++ + +NG+ +A+ +F +V
Sbjct: 151 DKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMV 210
Query: 346 TLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELH 405
+++D + ++L V G L +G+ +H L+ +K V N L+NMY KCG +
Sbjct: 211 NESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMD 270
Query: 406 DSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACS 465
++ VF M +++ I+W +I + GD AL+ M+ G+ P VT SL+ C
Sbjct: 271 EARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCG 330
Query: 466 HAGLVEKG 473
A V G
Sbjct: 331 DALKVNDG 338
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 332 bits (850), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 191/591 (32%), Positives = 312/591 (52%), Gaps = 11/591 (1%)
Query: 61 IHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMI 120
+H+ I+K +DS+ FV +L++ YS CG + A +F+ + +D V W ++
Sbjct: 168 LHSPIVK----LGYDSNA----FVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIV 219
Query: 121 SGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVG 180
S ++ N F+ + M + + + + T T L A G ++ +HG +
Sbjct: 220 SCYVENGYFEDSLKLLSCMRMAGFMPNNY---TFDTALKASIGLGAFDFAKGVHGQILKT 276
Query: 181 GFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLF 240
+ + VG L+ Y + G +VF+EM + +VV W+ +I+ QN + + LF
Sbjct: 277 CYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLF 336
Query: 241 AQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKC 300
+MR V PN T S L C+ + G ++HGL+ K+G D+ + +AL+D+Y+KC
Sbjct: 337 IRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKC 396
Query: 301 GSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVL 360
++ A ++F + VS ++V + G +A +F + + V S+ L
Sbjct: 397 EKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSAL 456
Query: 361 GVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSI 420
G S+ LG Q+H L IK N ++ VSN LI+MY+KCG++ + VF EM +
Sbjct: 457 GACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVA 516
Query: 421 SWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSM 480
SWN++I+ ++ HG G +AL+ + M+ P +TFL +L CS+AGL+++G E SM
Sbjct: 517 SWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESM 576
Query: 481 TRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEM 540
RDH + P EHY C+V +LGR+G L +A IEG+P V++W+A+L A + E
Sbjct: 577 IRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEF 636
Query: 541 GKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDK 600
+ +A++++ P A +VL++N+Y+ +W A K MKE GV KE G+SWIE
Sbjct: 637 ARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQG 696
Query: 601 QVSSFVVGDKLHPQADIIFLELSRLLKHLKDEGYVPDKRCILYYLDQDKKD 651
V F VG HP +I L L GYVPD+ +L +D ++KD
Sbjct: 697 DVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKD 747
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 140/511 (27%), Positives = 254/511 (49%), Gaps = 26/511 (5%)
Query: 32 TSESVL----NHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNS 87
+S+S++ +HA+ ++L C + + +IH I+K+ LF N
Sbjct: 39 SSDSIIPGLDSHAY-GAMLRRCIQKNDPISAKAIHCDILKKGSCLD--------LFATNI 89
Query: 88 LLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYS 147
LL+ Y K G +DA+ LFD MP R+ VS+ ++ G+ R ++ E
Sbjct: 90 LLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGHE------ 143
Query: 148 RFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQ 207
+ T+ L + + + +H + G++ VG ALI +Y CG R
Sbjct: 144 -LNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSART 202
Query: 208 VFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQA 267
VF+ ++ +++V W ++S +N +ED L+L + MR PN T+ ++L A G+ A
Sbjct: 203 VFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGA 262
Query: 268 LAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVA 327
+ +HG + K D + L+ LY++ G + A+++F + D V + ++
Sbjct: 263 FDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIAR 322
Query: 328 FAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQN 387
F QNGF EA+ +F R+ + + +S++L +G LG+Q+H L++K F +
Sbjct: 323 FCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLD 382
Query: 388 PFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRV 447
+VSN LI++Y+KC ++ ++++F E++ KN +SWN+VI + G+G +A + E
Sbjct: 383 IYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALR 442
Query: 448 GGIAPTDVTFLSLLHACSHAGLVEKGMEF--LVSMTRDHRLSPRSEHYACVVDMLGRAGL 505
++ T+VTF S L AC+ ++ G++ L T + + S ++DM + G
Sbjct: 443 NQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNS---LIDMYAKCGD 499
Query: 506 LKEAKNFIEGLPENRGVLVWQALLGACSIHG 536
+K A++ + E V W AL+ S HG
Sbjct: 500 IKFAQSVFNEM-ETIDVASWNALISGYSTHG 529
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 160/331 (48%), Gaps = 10/331 (3%)
Query: 138 QMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYF 197
+ S ++ D ML C ++ IH + G ++ N L+ +Y
Sbjct: 36 DLESSDSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYV 95
Query: 198 KCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQM--RGGSVSPNTLTY 255
K G +FDEM ERN V++ LAQ +D + L++++ G ++P+ T
Sbjct: 96 KAGFDKDALNLFDEMPERNNVSFVT----LAQGYACQDPIGLYSRLHREGHELNPHVFTS 151
Query: 256 LSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEE 315
L + +H + KLG S+ + +AL++ YS CGS++ A +FE
Sbjct: 152 FLKLFVSLDKAEICPW--LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILC 209
Query: 316 LDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLG-IEVDANMVSAVLGVFGVGTSLPLGKQ 374
D V I+ + +NG+ E+++++ + + G + + +A+ G+G + K
Sbjct: 210 KDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLG-AFDFAKG 268
Query: 375 IHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGD 434
+H I+K + +P V GL+ +Y++ G++ D+ +VF EM + + + W+ +IA F ++G
Sbjct: 269 VHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGF 328
Query: 435 GSRALQFYEEMRVGGIAPTDVTFLSLLHACS 465
+ A+ + MR + P + T S+L+ C+
Sbjct: 329 CNEAVDLFIRMREAFVVPNEFTLSSILNGCA 359
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 328 bits (842), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 204/605 (33%), Positives = 319/605 (52%), Gaps = 21/605 (3%)
Query: 38 NHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGE 97
N A + L C + + G IH ++++ F DS R SL++MY+KCG
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKG--FLDDSPRAGT-----SLVNMYAKCGL 111
Query: 98 LQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTM 157
++ A+ +F RD +N++ISGF+ N +++M + + DK T ++
Sbjct: 112 MRRAVLVFGGSE-RDVFGYNALISGFVVNGSPLDAMETYREMRANGILP---DKYTFPSL 167
Query: 158 LSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERN- 216
L D E S V + +HGL F GF+ + VG+ L+TSY K ++VFDE+ +R+
Sbjct: 168 LKGSDAMELSDVKK-VHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDD 226
Query: 217 VVTWTAVISGLAQNELYEDGLRLFAQMR--GGSVSPNTLTYLSSLMACSGVQALAEGRKI 274
V W A+++G +Q +ED L +F++MR G VS +T+T + S SG + GR I
Sbjct: 227 SVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSG--DIDNGRSI 284
Query: 275 HGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFE 334
HGL K G SD+ + +AL+D+Y K LE A IFE+ +E D + +L G
Sbjct: 285 HGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDH 344
Query: 335 EEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNF----SQNPFV 390
+ + +F R++ GI D ++ VL G SL G++IH +I S N F+
Sbjct: 345 DGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFI 404
Query: 391 SNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGI 450
N L++MY KCG+L D+ VF M K+S SWN +I + G AL + M G+
Sbjct: 405 HNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGV 464
Query: 451 APTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAK 510
P ++TF+ LL ACSH+G + +G FL M + + P S+HYACV+DMLGRA L+EA
Sbjct: 465 KPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAY 524
Query: 511 NFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEG 570
P +VW+++L +C +HG+ ++ A +L P +VLM+N+Y G
Sbjct: 525 ELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAG 584
Query: 571 KWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLK 630
K++E M+++ V K G SWI + V +F G++ HP+ I LS ++ H+
Sbjct: 585 KYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWLSLVISHMH 644
Query: 631 DEGYV 635
Y+
Sbjct: 645 GHEYM 649
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 328 bits (840), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 184/561 (32%), Positives = 310/561 (55%), Gaps = 15/561 (2%)
Query: 37 LNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCG 96
+N+ ++S++S CGR + S +HA + K F DSS V +L+SMYSK G
Sbjct: 349 INNCTVTSVISACGRPSMVCEASQVHAWVFKSG--FYLDSS------VAAALISMYSKSG 400
Query: 97 ELQDAIKLFDRMP-VRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLT 155
++ + ++F+ + ++ N MI+ F +++ R F +M + R D+ ++
Sbjct: 401 DIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGL---RTDEFSVC 457
Query: 156 TMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIER 215
++LS D ++ + +HG G ++TVG++L T Y KCG + ++F + +
Sbjct: 458 SLLSVLDCL---NLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFK 514
Query: 216 NVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIH 275
+ W ++ISG + + + LF++M SP+ T + L CS +L G++IH
Sbjct: 515 DNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIH 574
Query: 276 GLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEE 335
G + G+ + + SAL+++YSKCGSL+ A Q+++ ELD VS + ++ ++Q+G +
Sbjct: 575 GYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQ 634
Query: 336 EAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLI 395
+ +F +V G +D+ +S++L + LG Q+H+ I K P V + L+
Sbjct: 635 DGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLL 694
Query: 396 NMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDV 455
MYSK G + D + F ++ + I+W ++IA++A+HG + ALQ Y M+ G P V
Sbjct: 695 TMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKV 754
Query: 456 TFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEG 515
TF+ +L ACSH GLVE+ L SM +D+ + P + HY C+VD LGR+G L+EA++FI
Sbjct: 755 TFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINN 814
Query: 516 LPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKER 575
+ LVW LL AC IHG+ E+GK AA + I P+ + ++ ++NI + G+W E
Sbjct: 815 MHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEV 874
Query: 576 AGAIKRMKEKGVAKEVGVSWI 596
K MK GV KE G S +
Sbjct: 875 EETRKLMKGTGVQKEPGWSSV 895
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 148/532 (27%), Positives = 257/532 (48%), Gaps = 31/532 (5%)
Query: 58 GSSIHARIIKQPPFFS----FDSSRRNALF---VWNSLLSMYSKCGELQDAIKLFDRMPV 110
GS I A Q P FS + + F V ++L+ ++SK +DA K+F
Sbjct: 154 GSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLS 213
Query: 111 RDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVS 170
+ WN++I+G LRN+++ A F F +M + + D T +++L+AC E
Sbjct: 214 ANVYCWNTIIAGALRNQNYGAVFDLFHEMCVG---FQKPDSYTYSSVLAACASLEKLRFG 270
Query: 171 RMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQN 230
+++ V G E ++ V A++ Y KCG + +VF + +VV+WT ++SG ++
Sbjct: 271 KVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKS 329
Query: 231 ELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIE 290
L +F +MR V N T S + AC + E ++H ++K G D +
Sbjct: 330 NDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVA 389
Query: 291 SALMDLYSKCGSLEGAWQIFESAEELDGVSL-TVILVAFAQNGFEEEAIQIFTRIVTLGI 349
+AL+ +YSK G ++ + Q+FE +++ ++ V++ +F+Q+ +AI++FTR++ G+
Sbjct: 390 AALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGL 449
Query: 350 EVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQ 409
D V ++L V L LGKQ+H +K + V + L +YSKCG L +S +
Sbjct: 450 RTDEFSVCSLLSVLDC---LNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYK 506
Query: 410 VFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGL 469
+F + K++ W S+I+ F +G A+ + EM G +P + T ++L CS
Sbjct: 507 LFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPS 566
Query: 470 VEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALL 529
+ +G E + T + + + +V+M + G LK A+ + LPE V +L+
Sbjct: 567 LPRGKE-IHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSC-SSLI 624
Query: 530 GACSIHG----------DSEMGKFAADQL----ILAAPASSAPHVLMANIYS 567
S HG D M F D IL A A S L A +++
Sbjct: 625 SGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHA 676
Score = 176 bits (445), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 126/440 (28%), Positives = 221/440 (50%), Gaps = 15/440 (3%)
Query: 82 LFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSE 141
+F+ SLLS YS G + DA KLFD +P D VS N MISG+ ++R F+ RFF +M
Sbjct: 84 VFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHF 143
Query: 142 SRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGC 201
+ ++ + SA P FS + + + +G F E+ V +ALI + K
Sbjct: 144 LGFEANEISYGSVISACSALQAPLFSEL--VCCHTIKMGYFFYEV-VESALIDVFSKNLR 200
Query: 202 FCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMA 261
F +VF + + NV W +I+G +N+ Y LF +M G P++ TY S L A
Sbjct: 201 FEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAA 260
Query: 262 CSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSL 321
C+ ++ L G+ + + K G + D+ + +A++DLY+KCG + A ++F VS
Sbjct: 261 CASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSW 319
Query: 322 TVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIK 381
TV+L + ++ A++IF + G+E++ V++V+ G + + Q+H+ + K
Sbjct: 320 TVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFK 379
Query: 382 KNFSQNPFVSNGLINMYSKCGELHDSLQVFYEM--TQKNSISWNSVIAAFARHGDGSRAL 439
F + V+ LI+MYSK G++ S QVF ++ Q+ +I N +I +F++ +A+
Sbjct: 380 SGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV-NVMITSFSQSKKPGKAI 438
Query: 440 QFYEEMRVGGIAPTDVTFLSLLHA--CSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVV 497
+ + M G+ + + SLL C + G G + D + + +
Sbjct: 439 RLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVG------SSLF 492
Query: 498 DMLGRAGLLKEAKNFIEGLP 517
+ + G L+E+ +G+P
Sbjct: 493 TLYSKCGSLEESYKLFQGIP 512
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 157/338 (46%), Gaps = 20/338 (5%)
Query: 133 FRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNAL 192
FRFF S SR R K +L + L F ++ + +L
Sbjct: 50 FRFFNDQSNSRLCNLRTTKILQAHLLRR-------------YLLPF------DVFLTKSL 90
Query: 193 ITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNT 252
++ Y G ++FD + + +VV+ +ISG Q+ L+E+ LR F++M N
Sbjct: 91 LSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANE 150
Query: 253 LTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFES 312
++Y S + ACS +QA + K+G +ESAL+D++SK E A+++F
Sbjct: 151 ISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRD 210
Query: 313 AEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLG 372
+ + I+ +N +F + + D+ S+VL L G
Sbjct: 211 SLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFG 270
Query: 373 KQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARH 432
K + + +IK +++ FV ++++Y+KCG + ++++VF + + +SW +++ + +
Sbjct: 271 KVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKS 329
Query: 433 GDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLV 470
D AL+ ++EMR G+ + T S++ AC +V
Sbjct: 330 NDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMV 367
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 121/264 (45%), Gaps = 7/264 (2%)
Query: 277 LLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEE 336
LL + + D+ + +L+ YS GS+ A ++F++ + D VS +++ + Q+ EE
Sbjct: 74 LLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEE 133
Query: 337 AIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLIN 396
+++ F+++ LG E + +V+ + + + IK + V + LI+
Sbjct: 134 SLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALID 193
Query: 397 MYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVT 456
++SK D+ +VF + N WN++IA R+ + + EM VG P T
Sbjct: 194 VFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYT 253
Query: 457 FLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYAC--VVDMLGRAGLLKEAKNFIE 514
+ S+L AC+ +EK V R + + + C +VD+ + G + EA
Sbjct: 254 YSSVLAACAS---LEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFS 309
Query: 515 GLPENRGVLVWQALLGACSIHGDS 538
+P N V+ W +L + D+
Sbjct: 310 RIP-NPSVVSWTVMLSGYTKSNDA 332
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 326 bits (835), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 187/558 (33%), Positives = 315/558 (56%), Gaps = 18/558 (3%)
Query: 43 SSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGE-LQDA 101
+SLL C + + G HA ++K S + RN V NSLLS+Y K G +++
Sbjct: 65 ASLLQTCNKVFSFIHGIQFHAHVVK-----SGLETDRN---VGNSLLSLYFKLGPGMRET 116
Query: 102 IKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSAC 161
++FD V+D +SW SM+SG++ ++ F +M + F TL++ + AC
Sbjct: 117 RRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEF---TLSSAVKAC 173
Query: 162 DGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWT 221
+ R HG+V GFE + + L Y R+VFDEM E +V+ WT
Sbjct: 174 SELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWT 233
Query: 222 AVISGLAQNELYEDGLRLFAQM-RGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWK 280
AV+S ++N+LYE+ L LF M RG + P+ T+ + L AC ++ L +G++IHG L
Sbjct: 234 AVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLIT 293
Query: 281 LGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQI 340
G+ S++ +ES+L+D+Y KCGS+ A Q+F + + VS + +L + QNG E+AI+I
Sbjct: 294 NGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEI 353
Query: 341 FTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSK 400
F + + ++ A G+ ++ LGK+IH +++ N V + LI++Y K
Sbjct: 354 FREMEEKDLYCFGTVLKACAGL----AAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGK 409
Query: 401 CGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSL 460
G + + +V+ +M+ +N I+WN++++A A++G G A+ F+ +M GI P ++F+++
Sbjct: 410 SGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAI 469
Query: 461 LHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENR 520
L AC H G+V++G + V M + + + P +EHY+C++D+LGRAGL +EA+N +E
Sbjct: 470 LTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRN 529
Query: 521 GVLVWQALLGACSIHGD-SEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAI 579
+W LLG C+ + D S + + A +++ P +VL++N+Y A G+ +
Sbjct: 530 DASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIR 589
Query: 580 KRMKEKGVAKEVGVSWIE 597
K M +GVAK VG SWI+
Sbjct: 590 KLMVRRGVAKTVGQSWID 607
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 1/142 (0%)
Query: 336 EAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLI 395
EAI+I + I + +++L S G Q H+ ++K + V N L+
Sbjct: 44 EAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLL 103
Query: 396 NMYSKCGE-LHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTD 454
++Y K G + ++ +VF K++ISW S+++ + + +AL+ + EM G+ +
Sbjct: 104 SLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANE 163
Query: 455 VTFLSLLHACSHAGLVEKGMEF 476
T S + ACS G V G F
Sbjct: 164 FTLSSAVKACSELGEVRLGRCF 185
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 325 bits (834), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 199/639 (31%), Positives = 324/639 (50%), Gaps = 46/639 (7%)
Query: 46 LSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLF 105
LS C + G IH I+K ++ D LFV NSL+ Y++CGEL A K+F
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMG--YAKD------LFVQNSLVHFYAECGELDSARKVF 192
Query: 106 DRMPVRDTVSWNSMISGFLRNRDF--DAGFRFFKQMSESRTVYSRFDKATLTTMLSACDG 163
D M R+ VSW SMI G+ R RDF DA FF+ + + + T+ ++SAC
Sbjct: 193 DEMSERNVVSWTSMICGYAR-RDFAKDAVDLFFRMVRDEEVTP---NSVTMVCVISACAK 248
Query: 164 PEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAV 223
E ++ + G E + +AL+ Y KC +++FDE N+ A+
Sbjct: 249 LEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAM 308
Query: 224 ISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGM 283
S + L + L +F M V P+ ++ LS++ +CS ++ + G+ HG + + G
Sbjct: 309 ASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGF 368
Query: 284 QSDLCIESALMDLYSKC-------------------------------GSLEGAWQIFES 312
+S I +AL+D+Y KC G ++ AW+ FE+
Sbjct: 369 ESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFET 428
Query: 313 AEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTL-GIEVDANMVSAVLGVFGVGTSLPL 371
E + VS I+ Q EEAI++F + + G+ D + ++ G +L L
Sbjct: 429 MPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDL 488
Query: 372 GKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFAR 431
K I+ I K + + L++M+S+CG+ ++ +F +T ++ +W + I A A
Sbjct: 489 AKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAM 548
Query: 432 HGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSE 491
G+ RA++ +++M G+ P V F+ L ACSH GLV++G E SM + H +SP
Sbjct: 549 AGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDV 608
Query: 492 HYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILA 551
HY C+VD+LGRAGLL+EA IE +P ++W +LL AC + G+ EM +AA+++ +
Sbjct: 609 HYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVL 668
Query: 552 APASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKL 611
AP + +VL++N+Y++ G+W + A MKEKG+ K G S I+I + F GD+
Sbjct: 669 APERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDES 728
Query: 612 HPQADIIFLELSRLLKHLKDEGYVPDKRCILYYLDQDKK 650
HP+ I L + + G+VPD +L +D+ +K
Sbjct: 729 HPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEK 767
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/440 (27%), Positives = 209/440 (47%), Gaps = 45/440 (10%)
Query: 75 DSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFR 134
+S F++NSL+ Y+ G +AI LF RM NS IS
Sbjct: 92 NSESYGTCFMYNSLIRGYASSGLCNEAILLFLRM-------MNSGISP------------ 132
Query: 135 FFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALIT 194
DK T LSAC IHGL+ G+ +++ V N+L+
Sbjct: 133 ---------------DKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVH 177
Query: 195 SYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQM-RGGSVSPNTL 253
Y +CG R+VFDEM ERNVV+WT++I G A+ + +D + LF +M R V+PN++
Sbjct: 178 FYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSV 237
Query: 254 TYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFES- 312
T + + AC+ ++ L G K++ + G++ + + SAL+D+Y KC +++ A ++F+
Sbjct: 238 TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEY 297
Query: 313 -AEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVD-ANMVSAVLGVFGVGTSLP 370
A LD + + + + G EA+ +F ++ G+ D +M+SA+ + L
Sbjct: 298 GASNLDLCN--AMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNIL- 354
Query: 371 LGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFA 430
GK H +++ F + N LI+MY KC + ++F M+ K ++WNS++A +
Sbjct: 355 WGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYV 414
Query: 431 RHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRS 490
+G+ A + +E M I V++ +++ L E+ +E SM ++
Sbjct: 415 ENGEVDAAWETFETMPEKNI----VSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADG 470
Query: 491 EHYACVVDMLGRAGLLKEAK 510
+ G G L AK
Sbjct: 471 VTMMSIASACGHLGALDLAK 490
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 325 bits (834), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 180/574 (31%), Positives = 321/574 (55%), Gaps = 16/574 (2%)
Query: 69 PPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRD 128
PP+ +++ + N ++S + K G +++A LFD MP RD V+W +MI+G+ +
Sbjct: 37 PPY----KPKKHHILATNLIVSYFEK-GLVEEARSLFDEMPDRDVVAWTAMITGYASSNY 91
Query: 129 FDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITV 188
+ F +M + T + F TL+++L +C + + ++HG+V G E + V
Sbjct: 92 NARAWECFHEMVKQGTSPNEF---TLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYV 148
Query: 189 GNALITSYFKCGCFCQGR-QVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQM--RG 245
NA++ Y C + +F ++ +N VTWT +I+G GL+++ QM
Sbjct: 149 DNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLEN 208
Query: 246 GSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEG 305
V+P +T ++ A + + ++ G++IH + K G QS+L + ++++DLY +CG L
Sbjct: 209 AEVTPYCITI--AVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSE 266
Query: 306 AWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGV 365
A F E+ D ++ L++ + EA+ +F R + G + ++++
Sbjct: 267 AKHYFHEMEDKDLITWNT-LISELERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACAN 325
Query: 366 GTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMT-QKNSISWNS 424
+L G+Q+H I ++ F++N ++N LI+MY+KCG + DS +VF E+ ++N +SW S
Sbjct: 326 IAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTS 385
Query: 425 VIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDH 484
++ + HG G+ A++ +++M GI P + F+++L AC HAGLVEKG+++ M ++
Sbjct: 386 MMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEY 445
Query: 485 RLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHG-DSEMGKF 543
++P + Y CVVD+LGRAG + EA +E +P W A+LGAC H + + +
Sbjct: 446 GINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRL 505
Query: 544 AADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVS 603
AA +++ P +V+++ IY+AEGKW + A K M+ G KE G+SWI ++ QV
Sbjct: 506 AARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVF 565
Query: 604 SFVVGDKLHPQADIIFLELSRLLKHLKDEGYVPD 637
SF V DK+ P A ++ L L++ ++ GYVP+
Sbjct: 566 SFAVSDKMCPNASSVYSVLGLLIEETREAGYVPE 599
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 208/400 (52%), Gaps = 18/400 (4%)
Query: 38 NHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCG- 96
N LSS+L C L G+ +H ++K +L+V N++++MY+ C
Sbjct: 110 NEFTLSSVLKSCRNMKVLAYGALVHGVVVKL--------GMEGSLYVDNAMMNMYATCSV 161
Query: 97 ELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTT 156
++ A +F + V++ V+W ++I+GF D G + +KQM + + +T
Sbjct: 162 TMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPY---CITI 218
Query: 157 MLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERN 216
+ A + + + IH V GF+ + V N+++ Y +CG + + F EM +++
Sbjct: 219 AVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKD 278
Query: 217 VVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHG 276
++TW +IS L +++ E L +F + PN T+ S + AC+ + AL G+++HG
Sbjct: 279 LITWNTLISELERSDSSE-ALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHG 337
Query: 277 LLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIF-ESAEELDGVSLTVILVAFAQNGFEE 335
+++ G ++ + +AL+D+Y+KCG++ + ++F E + + VS T +++ + +G+
Sbjct: 338 RIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGA 397
Query: 336 EAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNP--FVSNG 393
EA+++F ++V+ GI D + AVL + G + + +++ + NP + N
Sbjct: 398 EAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFN-VMESEYGINPDRDIYNC 456
Query: 394 LINMYSKCGELHDSLQVFYEMTQK-NSISWNSVIAAFARH 432
++++ + G++ ++ ++ M K + +W +++ A H
Sbjct: 457 VVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAH 496
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 325 bits (834), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 182/585 (31%), Positives = 302/585 (51%), Gaps = 18/585 (3%)
Query: 45 LLSVCGRDGNLHLGSSIHARI---IKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDA 101
L C +L G +H R+ I+ P ++ + N +L MY +C L+DA
Sbjct: 89 LFEACRELRSLSHGRLLHDRMRMGIENP-----------SVLLQNCVLQMYCECRSLEDA 137
Query: 102 IKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSAC 161
KLFD M + VS +MIS + D F M S + + TT+L +
Sbjct: 138 DKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASG---DKPPSSMYTTLLKSL 194
Query: 162 DGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWT 221
P R IH V G ++ ++ Y KCG ++VFD+M + V T
Sbjct: 195 VNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACT 254
Query: 222 AVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKL 281
++ G Q D L+LF + V ++ + L AC+ ++ L G++IH + KL
Sbjct: 255 GLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKL 314
Query: 282 GMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIF 341
G++S++ + + L+D Y KC S E A + F+ E + VS + I+ + Q EEA++ F
Sbjct: 315 GLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTF 374
Query: 342 TRIVTLGIEV-DANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSK 400
+ + + ++ +++ V +G Q+H+ IK++ + + + LI MYSK
Sbjct: 375 KSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSK 434
Query: 401 CGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSL 460
CG L D+ +VF M + ++W + I+ A +G+ S AL+ +E+M G+ P VTF+++
Sbjct: 435 CGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAV 494
Query: 461 LHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENR 520
L ACSHAGLVE+G L +M R + ++P +HY C++D+ R+GLL EA F++ +P
Sbjct: 495 LTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEP 554
Query: 521 GVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIK 580
+ W+ L C H + E+G+ A ++L P +A +VL N+Y+ GKW+E A +K
Sbjct: 555 DAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMK 614
Query: 581 RMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRL 625
M E+ + KE+ SWI+ ++ F+VGDK HPQ I+ +L
Sbjct: 615 LMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEF 659
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 325 bits (833), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 196/634 (30%), Positives = 318/634 (50%), Gaps = 76/634 (11%)
Query: 86 NSLLSMYSKCGELQDAIKLFDRMPV--RDTVSWNSMISGFLRNRDFDAGFRFFKQMSESR 143
+++S Y G++ A +F++ PV RDTV +N+MI+GF N D + F +M
Sbjct: 84 TTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEG 143
Query: 144 TVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGC-- 201
F A++ L+ E V H G +V NAL++ Y KC
Sbjct: 144 FKPDNFTFASVLAGLALVADDEKQCVQ--FHAAALKSGAGYITSVSNALVSVYSKCASSP 201
Query: 202 --FCQGRQVFDEMIERNVVTWT--------------------------------AVISGL 227
R+VFDE++E++ +WT A+ISG
Sbjct: 202 SLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGY 261
Query: 228 AQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDL 287
Y++ L + +M + + TY S + AC+ L G+++H + + + D
Sbjct: 262 VNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLR---REDF 318
Query: 288 CI--ESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAF----------------- 328
+++L+ LY KCG + A IFE D VS +L +
Sbjct: 319 SFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMK 378
Query: 329 --------------AQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQ 374
A+NGF EE +++F+ + G E S + V + G+Q
Sbjct: 379 EKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQ 438
Query: 375 IHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGD 434
H+ ++K F + N LI MY+KCG + ++ QVF M +S+SWN++IAA +HG
Sbjct: 439 YHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGH 498
Query: 435 GSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYA 494
G+ A+ YEEM GI P +T L++L ACSHAGLV++G ++ SM +R+ P ++HYA
Sbjct: 499 GAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYA 558
Query: 495 CVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPA 554
++D+L R+G +A++ IE LP +W+ALL C +HG+ E+G AAD+L P
Sbjct: 559 RLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPE 618
Query: 555 SSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQ 614
++L++N+++A G+W+E A K M+++GV KEV SWIE++ QV +F+V D HP+
Sbjct: 619 HDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPE 678
Query: 615 ADIIFLELSRLLKHLKDEGYVPDKRCILYYLDQD 648
A+ +++ L L K ++ GYVPD +L+ ++ D
Sbjct: 679 AEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESD 712
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/456 (24%), Positives = 194/456 (42%), Gaps = 82/456 (17%)
Query: 84 VWNSLLSMYSKCGE----LQDAIKLFDRMPVRDTVSW----------------------- 116
V N+L+S+YSKC L A K+FD + +D SW
Sbjct: 186 VSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGM 245
Query: 117 ---------NSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFS 167
N+MISG++ + ++M S D+ T +++ AC
Sbjct: 246 DDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGI---ELDEFTYPSVIRACATAGLL 302
Query: 168 SVSRMIHGLVFVGGFERE---ITVGNALITSYFKCGCFCQGRQVFD-------------- 210
+ + +H V RE N+L++ Y+KCG F + R +F+
Sbjct: 303 QLGKQVHAYV----LRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALL 358
Query: 211 -----------------EMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTL 253
EM E+N+++W +ISGLA+N E+GL+LF+ M+ P
Sbjct: 359 SGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDY 418
Query: 254 TYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESA 313
+ ++ +C+ + A G++ H L K+G S L +AL+ +Y+KCG +E A Q+F +
Sbjct: 419 AFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTM 478
Query: 314 EELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGK 373
LD VS ++ A Q+G EA+ ++ ++ GI D + VL + G+
Sbjct: 479 PCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGR 538
Query: 374 Q-IHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSIS-WNSVIAAFAR 431
+ S+ LI++ + G+ D+ V + K + W ++++
Sbjct: 539 KYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRV 598
Query: 432 HGDGSRALQFYEEMRVGGIAPTDVTF--LSLLHACS 465
HG+ + +++ G I D T+ LS +HA +
Sbjct: 599 HGNMELGIIAADKL-FGLIPEHDGTYMLLSNMHAAT 633
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/476 (22%), Positives = 195/476 (40%), Gaps = 118/476 (24%)
Query: 169 VSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIE-------------- 214
++R +HG + GF+ + N LI Y K RQ+FDE+ E
Sbjct: 32 LARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYC 91
Query: 215 -------------------RNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTY 255
R+ V + A+I+G + N + LF +M+ P+ T+
Sbjct: 92 ASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTF 151
Query: 256 LSSLMACSGVQALAEGRK----IHGLLWKLGMQSDLCIESALMDLYSKCGS----LEGAW 307
S L +G+ +A+ K H K G + +AL+ +YSKC S L A
Sbjct: 152 ASVL---AGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSAR 208
Query: 308 QIFESAEELDGVSLTVILVAFAQNG--------------------------------FEE 335
++F+ E D S T ++ + +NG F +
Sbjct: 209 KVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQ 268
Query: 336 EAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKK-NFSQNPFVSNGL 394
EA+++ R+V+ GIE+D +V+ L LGKQ+H+ ++++ +FS + N L
Sbjct: 269 EALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFH--FDNSL 326
Query: 395 INMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAF------------------------- 429
+++Y KCG+ ++ +F +M K+ +SWN++++ +
Sbjct: 327 VSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWM 386
Query: 430 ------ARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEF---LVSM 480
A +G G L+ + M+ G P D F + +C+ G G ++ L+ +
Sbjct: 387 IMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKI 446
Query: 481 TRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHG 536
D LS + ++ M + G+++EA+ +P V W AL+ A HG
Sbjct: 447 GFDSSLSAGN----ALITMYAKCGVVEEARQVFRTMPCLDSV-SWNALIAALGQHG 497
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 142/308 (46%), Gaps = 58/308 (18%)
Query: 44 SLLSVCGRDGNLHLGSSIHARIIKQPPF-FSFDSSRRNALFVWNSLLSMYSKCGELQDAI 102
S++ C G L LG +HA ++++ F F FD NSL+S+Y KCG+ +A
Sbjct: 291 SVIRACATAGLLQLGKQVHAYVLRREDFSFHFD----------NSLVSLYYKCGKFDEAR 340
Query: 103 KLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSES-------------------- 142
+F++MP +D VSWN+++SG++ + FK+M E
Sbjct: 341 AIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEE 400
Query: 143 ---------RTVYSRFDKA------TLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREIT 187
R + D A + + + C+G ++ H + GF+ ++
Sbjct: 401 GLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQY-------HAQLLKIGFDSSLS 453
Query: 188 VGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGS 247
GNALIT Y KCG + RQVF M + V+W A+I+ L Q+ + + ++ +M
Sbjct: 454 AGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKG 513
Query: 248 VSPNTLTYLSSLMACSGVQALAEGRKIHG---LLWKLGMQSDLCIESALMDLYSKCGSLE 304
+ P+ +T L+ L ACS + +GRK ++++ +D + L+DL + G
Sbjct: 514 IRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADH--YARLIDLLCRSGKFS 571
Query: 305 GAWQIFES 312
A + ES
Sbjct: 572 DAESVIES 579
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 325 bits (833), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 199/639 (31%), Positives = 324/639 (50%), Gaps = 46/639 (7%)
Query: 46 LSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLF 105
LS C + G IH I+K ++ D LFV NSL+ Y++CGEL A K+F
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMG--YAKD------LFVQNSLVHFYAECGELDSARKVF 192
Query: 106 DRMPVRDTVSWNSMISGFLRNRDF--DAGFRFFKQMSESRTVYSRFDKATLTTMLSACDG 163
D M R+ VSW SMI G+ R RDF DA FF+ + + + T+ ++SAC
Sbjct: 193 DEMSERNVVSWTSMICGYAR-RDFAKDAVDLFFRMVRDEEVTP---NSVTMVCVISACAK 248
Query: 164 PEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAV 223
E ++ + G E + +AL+ Y KC +++FDE N+ A+
Sbjct: 249 LEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAM 308
Query: 224 ISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGM 283
S + L + L +F M V P+ ++ LS++ +CS ++ + G+ HG + + G
Sbjct: 309 ASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGF 368
Query: 284 QSDLCIESALMDLYSKC-------------------------------GSLEGAWQIFES 312
+S I +AL+D+Y KC G ++ AW+ FE+
Sbjct: 369 ESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFET 428
Query: 313 AEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTL-GIEVDANMVSAVLGVFGVGTSLPL 371
E + VS I+ Q EEAI++F + + G+ D + ++ G +L L
Sbjct: 429 MPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDL 488
Query: 372 GKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFAR 431
K I+ I K + + L++M+S+CG+ ++ +F +T ++ +W + I A A
Sbjct: 489 AKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAM 548
Query: 432 HGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSE 491
G+ RA++ +++M G+ P V F+ L ACSH GLV++G E SM + H +SP
Sbjct: 549 AGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDV 608
Query: 492 HYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILA 551
HY C+VD+LGRAGLL+EA IE +P ++W +LL AC + G+ EM +AA+++ +
Sbjct: 609 HYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVL 668
Query: 552 APASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKL 611
AP + +VL++N+Y++ G+W + A MKEKG+ K G S I+I + F GD+
Sbjct: 669 APERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDES 728
Query: 612 HPQADIIFLELSRLLKHLKDEGYVPDKRCILYYLDQDKK 650
HP+ I L + + G+VPD +L +D+ +K
Sbjct: 729 HPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEK 767
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 122/440 (27%), Positives = 209/440 (47%), Gaps = 45/440 (10%)
Query: 75 DSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFR 134
+S F++NSL+ Y+ G +AI LF RM NS IS
Sbjct: 92 NSESYGTCFMYNSLIRGYASSGLCNEAILLFLRM-------MNSGISP------------ 132
Query: 135 FFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALIT 194
DK T LSAC IHGL+ G+ +++ V N+L+
Sbjct: 133 ---------------DKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVH 177
Query: 195 SYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQM-RGGSVSPNTL 253
Y +CG R+VFDEM ERNVV+WT++I G A+ + +D + LF +M R V+PN++
Sbjct: 178 FYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSV 237
Query: 254 TYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFES- 312
T + + AC+ ++ L G K++ + G++ + + SAL+D+Y KC +++ A ++F+
Sbjct: 238 TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEY 297
Query: 313 -AEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVD-ANMVSAVLGVFGVGTSLP 370
A LD + + + + G EA+ +F ++ G+ D +M+SA+ + L
Sbjct: 298 GASNLDLCN--AMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNIL- 354
Query: 371 LGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFA 430
GK H +++ F + N LI+MY KC + ++F M+ K ++WNS++A +
Sbjct: 355 WGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYV 414
Query: 431 RHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRS 490
+G+ A + +E M I V++ +++ L E+ +E SM ++
Sbjct: 415 ENGEVDAAWETFETMPEKNI----VSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADG 470
Query: 491 EHYACVVDMLGRAGLLKEAK 510
+ G G L AK
Sbjct: 471 VTMMSIASACGHLGALDLAK 490
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 323 bits (828), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 186/620 (30%), Positives = 319/620 (51%), Gaps = 40/620 (6%)
Query: 62 HARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMIS 121
H +I+ F D + LF +L S S L+ A K+FD +P ++ +WN++I
Sbjct: 50 HGHMIRTGTFS--DPYSASKLFAMAALSSFAS----LEYARKVFDEIPKPNSFAWNTLIR 103
Query: 122 GFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGG 181
+ D F M Y +K T ++ A S+ + +HG+
Sbjct: 104 AYASGPDPVLSIWAFLDMVSESQCYP--NKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSA 161
Query: 182 FEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFA 241
++ V N+LI YF CG +VF + E++VV+W ++I+G Q + L LF
Sbjct: 162 VGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFK 221
Query: 242 QMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCG 301
+M V + +T + L AC+ ++ L GR++ + + + +L + +A++D+Y+KCG
Sbjct: 222 KMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCG 281
Query: 302 SLEGAWQIFESAEELDGVSLTVIL-------------------------------VAFAQ 330
S+E A ++F++ EE D V+ T +L A+ Q
Sbjct: 282 SIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQ 341
Query: 331 NGFEEEAIQIFTRI-VTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPF 389
NG EA+ +F + + ++++ + + L +L LG+ IHS I K N
Sbjct: 342 NGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFH 401
Query: 390 VSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGG 449
V++ LI+MYSKCG+L S +VF + +++ W+++I A HG G+ A+ + +M+
Sbjct: 402 VTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEAN 461
Query: 450 IAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEA 509
+ P VTF ++ ACSH GLV++ M ++ + P +HYAC+VD+LGR+G L++A
Sbjct: 462 VKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKA 521
Query: 510 KNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAE 569
FIE +P VW ALLGAC IH + + + A +L+ P + HVL++NIY+
Sbjct: 522 VKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKL 581
Query: 570 GKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHL 629
GKW+ + K M+ G+ KE G S IEID + F+ GD HP ++ ++ +L +++ L
Sbjct: 582 GKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKL 641
Query: 630 KDEGYVPDKRCILYYLDQDK 649
K GY P+ +L +++++
Sbjct: 642 KSNGYEPEISQVLQIIEEEE 661
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 11/125 (8%)
Query: 37 LNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCG 96
LN L S LS C + G L LG IH+ I K +F V ++L+ MYSKCG
Sbjct: 363 LNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNF--------HVTSALIHMYSKCG 414
Query: 97 ELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTT 156
+L+ + ++F+ + RD W++MI G + + F +M E+ + + T T
Sbjct: 415 DLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANV---KPNGVTFTN 471
Query: 157 MLSAC 161
+ AC
Sbjct: 472 VFCAC 476
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 323 bits (827), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 192/643 (29%), Positives = 328/643 (51%), Gaps = 19/643 (2%)
Query: 11 LPSWVDSLKSKAPISQ-YPFPATSESVLNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQP 69
L W D L S P S+ PFP L+ LL VC L +G SIHA +I
Sbjct: 11 LLKW-DKLASLVPKSKKTPFPID--------RLNELLKVCANSSYLRIGESIHAHLI--- 58
Query: 70 PFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDF 129
+ SSR + NSL+++Y KC E A KLFD MP R+ VSW +M+ G+ +N F
Sbjct: 59 --VTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGY-QNSGF 115
Query: 130 D-AGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITV 188
D + FK M S SR ++ T + +C + HG G V
Sbjct: 116 DFEVLKLFKSMFFSGE--SRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFV 173
Query: 189 GNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSV 248
N L+ Y C + +V D++ ++ +++ +SG + +++GL + +
Sbjct: 174 RNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDF 233
Query: 249 SPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQ 308
N LTYLSSL S ++ L ++H + + G +++ AL+++Y KCG + A +
Sbjct: 234 VWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQR 293
Query: 309 IFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTS 368
+F+ + T I+ A+ Q+ EEA+ +F+++ T + + + +L +
Sbjct: 294 VFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSL 353
Query: 369 LPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAA 428
L G +H L++K + + V N L+NMY+K G + D+ + F MT ++ ++WN++I+
Sbjct: 354 LKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISG 413
Query: 429 FARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSP 488
+ HG G AL+ ++ M G P +TF+ +L ACSH G VE+G+ + + + + P
Sbjct: 414 CSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQP 473
Query: 489 RSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQL 548
+HY C+V +L +AG+ K+A++F+ P V+ W+ LL AC + + +GK A+
Sbjct: 474 DIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYA 533
Query: 549 ILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVG 608
I P S +VL++NI++ +W+ A M +GV KE GVSWI I Q F+
Sbjct: 534 IEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAE 593
Query: 609 DKLHPQADIIFLELSRLLKHLKDEGYVPDKRCILYYLDQDKKD 651
D HP+ +I+ ++ ++ +K GY PD + +D+++++
Sbjct: 594 DNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDEEQRE 636
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 322 bits (826), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 176/558 (31%), Positives = 302/558 (54%), Gaps = 15/558 (2%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDA 101
S L C +L G IH +++K P SFD+ V LL MY+KCGE++ A
Sbjct: 145 FSKALKACTELQDLDNGKKIHCQLVKVP---SFDN------VVLTGLLDMYAKCGEIKSA 195
Query: 102 IKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSAC 161
K+F+ + +R+ V W SMI+G+++N + G F +M E+ + + + T T++ AC
Sbjct: 196 HKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEY---TYGTLIMAC 252
Query: 162 DGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWT 221
+ HG + G E + +L+ Y KCG R+VF+E ++V WT
Sbjct: 253 TKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWT 312
Query: 222 AVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKL 281
A+I G N + L LF +M+G + PN +T S L C ++ L GR +HGL K+
Sbjct: 313 AMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKV 372
Query: 282 GMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIF 341
G+ D + +AL+ +Y+KC A +FE E D V+ I+ F+QNG EA+ +F
Sbjct: 373 GIW-DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLF 431
Query: 342 TRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNF--SQNPFVSNGLINMYS 399
R+ + + + V+++ SL +G +H+ +K F S + V L++ Y+
Sbjct: 432 HRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYA 491
Query: 400 KCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLS 459
KCG+ + +F + +KN+I+W+++I + + GD +L+ +EEM P + TF S
Sbjct: 492 KCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTS 551
Query: 460 LLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPEN 519
+L AC H G+V +G ++ SM +D+ +P ++HY C+VDML RAG L++A + IE +P
Sbjct: 552 ILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQ 611
Query: 520 RGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAI 579
V + A L C +H ++G+ +++ P ++ +VL++N+Y+++G+W +
Sbjct: 612 PDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVR 671
Query: 580 KRMKEKGVAKEVGVSWIE 597
MK++G++K G S +E
Sbjct: 672 NLMKQRGLSKIAGHSTME 689
Score = 219 bits (558), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 134/453 (29%), Positives = 236/453 (52%), Gaps = 9/453 (1%)
Query: 88 LLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYS 147
L+S+Y G +DA +FD++P D W M+ + N++ + + + +
Sbjct: 82 LVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGF--- 138
Query: 148 RFDKATLTTMLSACDGPEFSSVSRMIH-GLVFVGGFEREITVGNALITSYFKCGCFCQGR 206
R+D + L AC + + IH LV V F+ + G L+ Y KCG
Sbjct: 139 RYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTG--LLDMYAKCGEIKSAH 196
Query: 207 QVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQ 266
+VF+++ RNVV WT++I+G +N+L E+GL LF +MR +V N TY + +MAC+ +
Sbjct: 197 KVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLS 256
Query: 267 ALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILV 326
AL +G+ HG L K G++ C+ ++L+D+Y KCG + A ++F +D V T ++V
Sbjct: 257 ALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIV 316
Query: 327 AFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQ 386
+ NG EA+ +F ++ + I+ + +++VL G+ +L LG+ +H L IK
Sbjct: 317 GYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI-W 375
Query: 387 NPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMR 446
+ V+N L++MY+KC + D+ VF ++K+ ++WNS+I+ F+++G AL + M
Sbjct: 376 DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMN 435
Query: 447 VGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHY-ACVVDMLGRAGL 505
+ P VT SL AC+ G + G + L+ S H ++D + G
Sbjct: 436 SESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGD 495
Query: 506 LKEAKNFIEGLPENRGVLVWQALLGACSIHGDS 538
+ A+ + + E + + W A++G GD+
Sbjct: 496 PQSARLIFDTI-EEKNTITWSAMIGGYGKQGDT 527
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 150/324 (46%), Gaps = 32/324 (9%)
Query: 5 RKFNTHLPSWVDSLKSKAPISQYPFPATSESVL-------------NHAHLSSLLSVCGR 51
R FN H S VD + A I Y + L N ++S+LS CG
Sbjct: 298 RVFNEH--SHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGL 355
Query: 52 DGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVR 111
NL LG S+H IK +D++ V N+L+ MY+KC + +DA +F+ +
Sbjct: 356 IENLELGRSVHGLSIKVGI---WDTN------VANALVHMYAKCYQNRDAKYVFEMESEK 406
Query: 112 DTVSWNSMISGFLRNRDF-DAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVS 170
D V+WNS+ISGF +N +A F F + SES T + T+ ++ SAC +V
Sbjct: 407 DIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTP----NGVTVASLFSACASLGSLAVG 462
Query: 171 RMIHGLVFVGGF--EREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLA 228
+H GF + VG AL+ Y KCG R +FD + E+N +TW+A+I G
Sbjct: 463 SSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYG 522
Query: 229 QNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWK-LGMQSDL 287
+ L LF +M PN T+ S L AC + EG+K ++K
Sbjct: 523 KQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPST 582
Query: 288 CIESALMDLYSKCGSLEGAWQIFE 311
+ ++D+ ++ G LE A I E
Sbjct: 583 KHYTCMVDMLARAGELEQALDIIE 606
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 190/404 (47%), Gaps = 18/404 (4%)
Query: 171 RMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQN 230
R HG++ G +I++ L++ Y G R VFD++ E + W ++ N
Sbjct: 61 RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLN 120
Query: 231 ELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIE 290
+ + ++L+ + + + + +L AC+ +Q L G+KIH L K+ D +
Sbjct: 121 KESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVP-SFDNVVL 179
Query: 291 SALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIE 350
+ L+D+Y+KCG ++ A ++F + V T ++ + +N EE + +F R+ +
Sbjct: 180 TGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVL 239
Query: 351 VDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQV 410
+ ++ ++L GK H ++K + + L++MY KCG++ ++ +V
Sbjct: 240 GNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRV 299
Query: 411 FYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLV 470
F E + + + W ++I + +G + AL +++M+ I P VT S+L C GL+
Sbjct: 300 FNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGC---GLI 356
Query: 471 EKGMEFLVSMTRDHRLSPR-----SEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVW 525
E +E S+ H LS + + +V M + ++AK E + + ++ W
Sbjct: 357 EN-LELGRSV---HGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFE-MESEKDIVAW 411
Query: 526 QALLGACSIHGDSEMGKFAADQLILAAPASSAPH-VLMANIYSA 568
+++ S +G F ++ S P+ V +A+++SA
Sbjct: 412 NSIISGFSQNGSIHEALFLFHRM---NSESVTPNGVTVASLFSA 452
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 322 bits (825), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 186/599 (31%), Positives = 313/599 (52%), Gaps = 39/599 (6%)
Query: 88 LLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYS 147
++S+Y+ L +A+ LF + ++W S+I F F F +M S
Sbjct: 45 VISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCP- 103
Query: 148 RFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKC---GCFCQ 204
D ++L +C +HG + G + ++ GNAL+ Y K G
Sbjct: 104 --DHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKIS 161
Query: 205 GRQVFDEMIER---------------------------------NVVTWTAVISGLAQNE 231
VFDEM +R +VV++ +I+G AQ+
Sbjct: 162 VGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSG 221
Query: 232 LYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIES 291
+YED LR+ +M + P++ T S L S + +G++IHG + + G+ SD+ I S
Sbjct: 222 MYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGS 281
Query: 292 ALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEV 351
+L+D+Y+K +E + ++F DG+S ++ + QNG EA+++F ++VT ++
Sbjct: 282 SLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKP 341
Query: 352 DANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVF 411
A S+V+ +L LGKQ+H +++ F N F+++ L++MYSKCG + + ++F
Sbjct: 342 GAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIF 401
Query: 412 YEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVE 471
M + +SW ++I A HG G A+ +EEM+ G+ P V F+++L ACSH GLV+
Sbjct: 402 DRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVD 461
Query: 472 KGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGA 531
+ + SMT+ + L+ EHYA V D+LGRAG L+EA NFI + VW LL +
Sbjct: 462 EAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSS 521
Query: 532 CSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEV 591
CS+H + E+ + A+++ + +VLM N+Y++ G+WKE A RM++KG+ K+
Sbjct: 522 CSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKP 581
Query: 592 GVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDEGYVPDKRCILYYLDQDKK 650
SWIE+ + FV GD+ HP D I L +++ ++ EGYV D +L+ +D++ K
Sbjct: 582 ACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHK 640
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 167/321 (52%), Gaps = 16/321 (4%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDA 101
LSS+L + ++ G IH +I++ DS +++ +SL+ MY+K ++D+
Sbjct: 245 LSSVLPIFSEYVDVIKGKEIHGYVIRK----GIDSD----VYIGSSLVDMYAKSARIEDS 296
Query: 102 IKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSAC 161
++F R+ RD +SWNS+++G+++N ++ R F+QM ++ + ++++ AC
Sbjct: 297 ERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKV---KPGAVAFSSVIPAC 353
Query: 162 DGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWT 221
+ + +HG V GGF I + +AL+ Y KCG R++FD M + V+WT
Sbjct: 354 AHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWT 413
Query: 222 AVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKL 281
A+I G A + + + LF +M+ V PN + +++ L ACS V + E + K+
Sbjct: 414 AIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKV 473
Query: 282 -GMQSDLCIESALMDLYSKCGSLEGAWQ-IFESAEELDGVSLTVILVAFAQNGFEEEAIQ 339
G+ +L +A+ DL + G LE A+ I + E G + +L + + + E A +
Sbjct: 474 YGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEK 533
Query: 340 IFTRIVTLGIEVDANMVSAVL 360
+ +I T+ E NM + VL
Sbjct: 534 VAEKIFTVDSE---NMGAYVL 551
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 322 bits (825), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 177/552 (32%), Positives = 298/552 (53%), Gaps = 4/552 (0%)
Query: 88 LLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYS 147
L++MY K DA ++FD M VRD+VS+N+MI G+L+ + R F + +
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ----F 303
Query: 148 RFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQ 207
+ D T++++L AC S+++ I+ + GF E TV N LI Y KCG R
Sbjct: 304 KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARD 363
Query: 208 VFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQA 267
VF+ M ++ V+W ++ISG Q+ + ++LF M + +TYL + + +
Sbjct: 364 VFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLAD 423
Query: 268 LAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVA 327
L G+ +H K G+ DL + +AL+D+Y+KCG + + +IF S D V+ ++ A
Sbjct: 424 LKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISA 483
Query: 328 FAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQN 387
+ G +Q+ T++ + D L + + LGK+IH +++ +
Sbjct: 484 CVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESE 543
Query: 388 PFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRV 447
+ N LI MYSKCG L +S +VF M++++ ++W +I A+ +G+G +AL+ + +M
Sbjct: 544 LQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEK 603
Query: 448 GGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLK 507
GI P V F+++++ACSH+GLV++G+ M +++ P EHYACVVD+L R+ +
Sbjct: 604 SGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKIS 663
Query: 508 EAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYS 567
+A+ FI+ +P +W ++L AC GD E + + ++I P +L +N Y+
Sbjct: 664 KAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYA 723
Query: 568 AEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLK 627
A KW + + K +K+K + K G SWIE+ K V F GD PQ++ I+ L L
Sbjct: 724 ALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYS 783
Query: 628 HLKDEGYVPDKR 639
+ EGY+PD R
Sbjct: 784 LMAKEGYIPDPR 795
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 131/507 (25%), Positives = 245/507 (48%), Gaps = 37/507 (7%)
Query: 54 NLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRM-PVRD 112
NL+ IHA +I DSS F L+ YS E ++ +F R+ P ++
Sbjct: 19 NLNELRRIHALVIS----LGLDSSD----FFSGKLIDKYSHFREPASSLSVFRRVSPAKN 70
Query: 113 TVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRM 172
WNS+I F +N F F+ ++ ES+ DK T +++ AC G + + +
Sbjct: 71 VYLWNSIIRAFSKNGLFPEALEFYGKLRESKV---SPDKYTFPSVIKACAGLFDAEMGDL 127
Query: 173 IHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNEL 232
++ + GFE ++ VGNAL+ Y + G + RQVFDEM R++V+W ++ISG + +
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGY 187
Query: 233 YEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESA 292
YE+ L ++ +++ + P++ T S L A + + +G+ +HG K G+ S + + +
Sbjct: 188 YEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNG 247
Query: 293 LMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVD 352
L+ +Y K A ++F+ + D VS ++ + + EE++++F + + D
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLD-QFKPD 306
Query: 353 ANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFY 412
VS+VL G L L K I++ ++K F V N LI++Y+KCG++ + VF
Sbjct: 307 LLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFN 366
Query: 413 EMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACS------- 465
M K+++SWNS+I+ + + GD A++ ++ M + +T+L L+ +
Sbjct: 367 SMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKF 426
Query: 466 ----HAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRG 521
H+ ++ G+ +S++ ++DM + G + ++ +
Sbjct: 427 GKGLHSNGIKSGICIDLSVSN------------ALIDMYAKCGEVGDSLKIFSSMGTGDT 474
Query: 522 VLVWQALLGACSIHGDSEMGKFAADQL 548
V W ++ AC GD G Q+
Sbjct: 475 V-TWNTVISACVRFGDFATGLQVTTQM 500
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/443 (24%), Positives = 204/443 (46%), Gaps = 5/443 (1%)
Query: 171 RMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIE-RNVVTWTAVISGLAQ 229
R IH LV G + LI Y VF + +NV W ++I ++
Sbjct: 24 RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSK 83
Query: 230 NELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCI 289
N L+ + L + ++R VSP+ T+ S + AC+G+ G ++ + +G +SDL +
Sbjct: 84 NGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFV 143
Query: 290 ESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGI 349
+AL+D+YS+ G L A Q+F+ D VS ++ ++ +G+ EEA++I+ + I
Sbjct: 144 GNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWI 203
Query: 350 EVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQ 409
D+ VS+VL FG + G+ +H +K + V+NGL+ MY K D+ +
Sbjct: 204 VPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARR 263
Query: 410 VFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGL 469
VF EM ++S+S+N++I + + +++ + E + P +T S+L AC H
Sbjct: 264 VFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRD 322
Query: 470 VEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALL 529
+ +++ + S ++D+ + G + A++ + E + + W +++
Sbjct: 323 LSLA-KYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSM-ECKDTVSWNSII 380
Query: 530 GACSIHGD-SEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVA 588
GD E K +I+ A ++++ ++ + K G + G+
Sbjct: 381 SGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGIC 440
Query: 589 KEVGVSWIEIDKQVSSFVVGDKL 611
++ VS ID VGD L
Sbjct: 441 IDLSVSNALIDMYAKCGEVGDSL 463
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 108/218 (49%), Gaps = 9/218 (4%)
Query: 261 ACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVS 320
A S L E R+IH L+ LG+ S L+D YS + +F V
Sbjct: 13 ALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVY 72
Query: 321 L-TVILVAFAQNGFEEEAIQIFTRIVTLGIEVD----ANMVSAVLGVFGVGTSLPLGKQI 375
L I+ AF++NG EA++ + ++ + D +++ A G+F +G +
Sbjct: 73 LWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDA----EMGDLV 128
Query: 376 HSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDG 435
+ I+ F + FV N L++MYS+ G L + QVF EM ++ +SWNS+I+ ++ HG
Sbjct: 129 YEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYY 188
Query: 436 SRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKG 473
AL+ Y E++ I P T S+L A + +V++G
Sbjct: 189 EEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQG 226
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 321 bits (822), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 172/483 (35%), Positives = 280/483 (57%), Gaps = 2/483 (0%)
Query: 170 SRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQ 229
++ HG + E ++T+ N LI +Y KCG RQVFD M+ER++V+W +I +
Sbjct: 80 AKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTR 139
Query: 230 NELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALA-EGRKIHGLLWKLGMQSDLC 288
N + + L +F +MR + T S L AC GV A E +K+H L K + +L
Sbjct: 140 NRMESEALDIFLEMRNEGFKFSEFTISSVLSAC-GVNCDALECKKLHCLSVKTCIDLNLY 198
Query: 289 IESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLG 348
+ +AL+DLY+KCG ++ A Q+FES ++ V+ + ++ + QN EEA+ ++ R +
Sbjct: 199 VGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMS 258
Query: 349 IEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSL 408
+E + +S+V+ +L GKQ+H++I K F N FV++ ++MY+KCG L +S
Sbjct: 259 LEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESY 318
Query: 409 QVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAG 468
+F E+ +KN WN++I+ FA+H + +E+M+ G+ P +VTF SLL C H G
Sbjct: 319 IIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTG 378
Query: 469 LVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQAL 528
LVE+G F M + LSP HY+C+VD+LGRAGLL EA I+ +P + +W +L
Sbjct: 379 LVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSL 438
Query: 529 LGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVA 588
L +C ++ + E+ + AA++L P ++ HVL++NIY+A +W+E A + K +++ V
Sbjct: 439 LASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVK 498
Query: 589 KEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDEGYVPDKRCILYYLDQD 648
K G SWI+I +V +F VG+ HP+ I L L+ + GY P L+ ++
Sbjct: 499 KVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIG 558
Query: 649 KKD 651
KK+
Sbjct: 559 KKE 561
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 205/394 (52%), Gaps = 15/394 (3%)
Query: 38 NHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGE 97
N + +L +C R+G + + H +II+ + + N L++ YSKCG
Sbjct: 60 NRNLVHEILQLCARNGAVMEAKACHGKIIR--------IDLEGDVTLLNVLINAYSKCGF 111
Query: 98 LQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTM 157
++ A ++FD M R VSWN+MI + RNR F +M +S F T++++
Sbjct: 112 VELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEF---TISSV 168
Query: 158 LSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNV 217
LSAC + + +H L + + VG AL+ Y KCG QVF+ M +++
Sbjct: 169 LSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSS 228
Query: 218 VTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGL 277
VTW+++++G QN+ YE+ L L+ + + S+ N T S + ACS + AL EG+++H +
Sbjct: 229 VTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAV 288
Query: 278 LWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEA 337
+ K G S++ + S+ +D+Y+KCGSL ++ IF +E + I+ FA++ +E
Sbjct: 289 ICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEV 348
Query: 338 IQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSN--GLI 395
+ +F ++ G+ + S++L V G + G++ L ++ + +P V + ++
Sbjct: 349 MILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKL-MRTTYGLSPNVVHYSCMV 407
Query: 396 NMYSKCGELHDSLQVFYEMTQKNSIS-WNSVIAA 428
++ + G L ++ ++ + + S W S++A+
Sbjct: 408 DILGRAGLLSEAYELIKSIPFDPTASIWGSLLAS 441
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 141/280 (50%), Gaps = 6/280 (2%)
Query: 259 LMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDG 318
L C+ A+ E + HG + ++ ++ D+ + + L++ YSKCG +E A Q+F+ E
Sbjct: 68 LQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSL 127
Query: 319 VSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSL 378
VS ++ + +N E EA+ IF + G + +S+VL GV K++H L
Sbjct: 128 VSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCL 187
Query: 379 IIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRA 438
+K N +V L+++Y+KCG + D++QVF M K+S++W+S++A + ++ + A
Sbjct: 188 SVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEA 247
Query: 439 LQFYEEMRVGGIAPTDVTFLSLLHACSH-AGLVE-KGMEFLVSMTRDHRLSPRSEHYACV 496
L Y + + T S++ ACS+ A L+E K M ++ + +
Sbjct: 248 LLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKS---GFGSNVFVASSA 304
Query: 497 VDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHG 536
VDM + G L+E+ + E + + +W ++ + H
Sbjct: 305 VDMYAKCGSLRESYIIFSEVQE-KNLELWNTIISGFAKHA 343
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 93/189 (49%), Gaps = 22/189 (11%)
Query: 352 DANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVF 411
+ N+V +L + ++ K H II+ + + + N LIN YSKCG + + QVF
Sbjct: 60 NRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVF 119
Query: 412 YEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVE 471
M +++ +SWN++I + R+ S AL + EMR G ++ T S+L AC G+
Sbjct: 120 DGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSAC---GVNC 176
Query: 472 KGMEFLVSMTRDHRLSPRSEHYACV----------VDMLGRAGLLKEAKNFIEGLPENRG 521
+E + H LS ++ C+ +D+ + G++K+A E + +++
Sbjct: 177 DALE----CKKLHCLSVKT----CIDLNLYVGTALLDLYAKCGMIKDAVQVFESM-QDKS 227
Query: 522 VLVWQALLG 530
+ W +++
Sbjct: 228 SVTWSSMVA 236
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 320 bits (820), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 194/588 (32%), Positives = 299/588 (50%), Gaps = 19/588 (3%)
Query: 46 LSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLF 105
L CG +L LG +H ++ + +F+ N L+ MYSKCG+L A+ LF
Sbjct: 155 LGFCGERCDLDLGELLHGLVVV--------NGLSQQVFLINVLIDMYSKCGKLDQAMSLF 206
Query: 106 DRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACD--- 162
DR RD VSWNS+ISG++R + +M + + L ++L AC
Sbjct: 207 DRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTY---ALGSVLKACCINL 263
Query: 163 GPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTA 222
F IH G E +I V AL+ Y K G + ++F M +NVVT+ A
Sbjct: 264 NEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNA 323
Query: 223 VISGLAQ-----NELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGL 277
+ISG Q +E + +LF M+ + P+ T+ L ACS + L GR+IH L
Sbjct: 324 MISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHAL 383
Query: 278 LWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEA 337
+ K QSD I SAL++LY+ GS E Q F S + D S T ++ QN E A
Sbjct: 384 ICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESA 443
Query: 338 IQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINM 397
+F ++ + I + VS ++ +L G+QI IK V I+M
Sbjct: 444 FDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISM 503
Query: 398 YSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTF 457
Y+K G + + QVF E+ + +++++I++ A+HG + AL +E M+ GI P F
Sbjct: 504 YAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAF 563
Query: 458 LSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLP 517
L +L AC H GLV +G+++ M D+R++P +H+ C+VD+LGR G L +A+N I
Sbjct: 564 LGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSG 623
Query: 518 ENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAG 577
+ W+ALL +C ++ DS +GK A++L+ P +S +VL+ NIY+ G
Sbjct: 624 FQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEE 683
Query: 578 AIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRL 625
+ M+++GV KE +SWI I Q SF V D HP + +I+ L +
Sbjct: 684 VRELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTMLETM 731
Score = 197 bits (502), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 145/506 (28%), Positives = 243/506 (48%), Gaps = 29/506 (5%)
Query: 45 LLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKL 104
L + G++ LG H +IK SS L++ N+LL+MY KC EL A +L
Sbjct: 53 LFQTAAKSGSVVLGKLAHGHMIK--------SSLNPCLYLLNNLLNMYCKCRELGFARQL 104
Query: 105 FDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGP 164
FDRMP R+ +S+NS+ISG+ + ++ F E+R + DK T L C
Sbjct: 105 FDRMPERNIISFNSLISGYTQMGFYEQAMELFL---EAREANLKLDKFTYAGALGFCGER 161
Query: 165 EFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVI 224
+ ++HGLV V G +++ + N LI Y KCG Q +FD ER+ V+W ++I
Sbjct: 162 CDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLI 221
Query: 225 SGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACS---GVQALAEGRKIHGLLWKL 281
SG + E+ L L A+M ++ T S L AC + +G IH KL
Sbjct: 222 SGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKL 281
Query: 282 GMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQ-----NGFEEE 336
GM+ D+ + +AL+D+Y+K GSL+ A ++F + V+ ++ F Q + E
Sbjct: 282 GMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSE 341
Query: 337 AIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLIN 396
A ++F + G+E + S VL +L G+QIH+LI K NF + F+ + LI
Sbjct: 342 AFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIE 401
Query: 397 MYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVT 456
+Y+ G D +Q F ++++ SW S+I ++ A + ++ I P + T
Sbjct: 402 LYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYT 461
Query: 457 FLSLLHACSHAGLVEKGME---FLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKN-F 512
++ AC+ + G + + + D S ++ + M ++G + A F
Sbjct: 462 VSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSS----ISMYAKSGNMPLANQVF 517
Query: 513 IEGLPENRGVLVWQALLGACSIHGDS 538
IE +N V + A++ + + HG +
Sbjct: 518 IE--VQNPDVATYSAMISSLAQHGSA 541
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 318 bits (815), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 181/583 (31%), Positives = 308/583 (52%), Gaps = 37/583 (6%)
Query: 101 AIKLFDRMPVR-DTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLS 159
A+ +F +P +++ +N + R+ + A F++++ R V R D+ + +L
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRI---RHVGGRLDQFSFLPILK 119
Query: 160 ACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVT 219
A +HG+ F + V + Y CG R VFDEM R+VVT
Sbjct: 120 AVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVT 179
Query: 220 WTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLW 279
W +I + L ++ +LF +M+ +V P+ + + + AC + R I+ L
Sbjct: 180 WNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLI 239
Query: 280 KLGMQSD-------------------------------LCIESALMDLYSKCGSLEGAWQ 308
+ ++ D L + +A++ YSKCG L+ A
Sbjct: 240 ENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQV 299
Query: 309 IFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDA-NMVSAVLGVFGVGT 367
IF+ E+ D V T ++ A+ ++ + +EA+++F + GI+ D +M S + +G
Sbjct: 300 IFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGI 359
Query: 368 SLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIA 427
L K +HS I ++N LINMY+KCG L + VF +M ++N +SW+S+I
Sbjct: 360 -LDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMIN 418
Query: 428 AFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLS 487
A + HG+ S AL + M+ + P +VTF+ +L+ CSH+GLVE+G + SMT ++ ++
Sbjct: 419 ALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNIT 478
Query: 488 PRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQ 547
P+ EHY C+VD+ GRA LL+EA IE +P V++W +L+ AC IHG+ E+GKFAA +
Sbjct: 479 PKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKR 538
Query: 548 LILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVV 607
++ P VLM+NIY+ E +W++ + M+EK V KE G+S I+ + + F++
Sbjct: 539 ILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLI 598
Query: 608 GDKLHPQADIIFLELSRLLKHLKDEGYVPDKRCILYYLDQDKK 650
GDK H Q++ I+ +L ++ LK GYVPD +L +++++K
Sbjct: 599 GDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEK 641
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 148/297 (49%), Gaps = 31/297 (10%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQP-------------------------PFFSFDS 76
L +++S CGR GN+ +I+ +I+ FF S
Sbjct: 215 LCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMS 274
Query: 77 SRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFF 136
R LFV +++S YSKCG L DA +FD+ +D V W +MIS ++ + R F
Sbjct: 275 VRN--LFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVF 332
Query: 137 KQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSY 196
++M S + D ++ +++SAC ++ +H + V G E E+++ NALI Y
Sbjct: 333 EEMCCSGI---KPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMY 389
Query: 197 FKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYL 256
KCG R VF++M RNVV+W+++I+ L+ + D L LFA+M+ +V PN +T++
Sbjct: 390 AKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFV 449
Query: 257 SSLMACSGVQALAEGRKIHGLLW-KLGMQSDLCIESALMDLYSKCGSLEGAWQIFES 312
L CS + EG+KI + + + L ++DL+ + L A ++ ES
Sbjct: 450 GVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIES 506
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 184/369 (49%), Gaps = 17/369 (4%)
Query: 74 FDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMP----VRDTVSWNSMISGFLRNRDF 129
FD + WN+++ Y + G + +A KLF+ M + D + +++S R +
Sbjct: 169 FDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNM 228
Query: 130 DAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVG 189
++ + E+ R D LT +++ G ++R + V R + V
Sbjct: 229 RYNRAIYEFLIENDV---RMDTHLLTALVTMYAGAGCMDMAREFFRKMSV----RNLFVS 281
Query: 190 NALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVS 249
A+++ Y KCG + +FD+ ++++V WT +IS +++ ++ LR+F +M +
Sbjct: 282 TAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIK 341
Query: 250 PNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQI 309
P+ ++ S + AC+ + L + + +H + G++S+L I +AL+++Y+KCG L+ +
Sbjct: 342 PDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDV 401
Query: 310 FESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTS- 368
FE + VS + ++ A + +G +A+ +F R+ +E N V+ V ++G S
Sbjct: 402 FEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVE--PNEVTFVGVLYGCSHSG 459
Query: 369 -LPLGKQIH-SLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEM-TQKNSISWNSV 425
+ GK+I S+ + N + +++++ + L ++L+V M N + W S+
Sbjct: 460 LVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSL 519
Query: 426 IAAFARHGD 434
++A HG+
Sbjct: 520 MSACRIHGE 528
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 318 bits (814), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 161/500 (32%), Positives = 282/500 (56%), Gaps = 5/500 (1%)
Query: 150 DKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVF 209
D AT + ++ C +I ++ G + + N LI Y K Q+F
Sbjct: 60 DSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLF 119
Query: 210 DEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALA 269
D+M +RNV++WT +IS ++ ++++ L L M +V PN TY S L +C+G ++
Sbjct: 120 DQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNG---MS 176
Query: 270 EGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFA 329
+ R +H + K G++SD+ + SAL+D+++K G E A +F+ D + I+ FA
Sbjct: 177 DVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFA 236
Query: 330 QNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPF 389
QN + A+++F R+ G + +++VL L LG Q H I+K + Q+
Sbjct: 237 QNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLI 294
Query: 390 VSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGG 449
++N L++MY KCG L D+L+VF +M +++ I+W+++I+ A++G AL+ +E M+ G
Sbjct: 295 LNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSG 354
Query: 450 IAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEA 509
P +T + +L ACSHAGL+E G + SM + + + P EHY C++D+LG+AG L +A
Sbjct: 355 TKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDA 414
Query: 510 KNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAE 569
+ + + W+ LLGAC + + + ++AA ++I P + + L++NIY+
Sbjct: 415 VKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANS 474
Query: 570 GKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHL 629
KW RM+++G+ KE G SWIE++KQ+ +F++GD HPQ + +L++L+ L
Sbjct: 475 QKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRL 534
Query: 630 KDEGYVPDKRCILYYLDQDK 649
GYVP+ +L L+ ++
Sbjct: 535 TGIGYVPETNFVLQDLEGEQ 554
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 120/427 (28%), Positives = 212/427 (49%), Gaps = 22/427 (5%)
Query: 38 NHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGE 97
+ A S L+ C + +H G+ +I + +F+ R +F+ N L++MY K
Sbjct: 60 DSATYSELIKCCISNRAVHEGN-----LICRHLYFN---GHRPMMFLVNVLINMYVKFNL 111
Query: 98 LQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTM 157
L DA +LFD+MP R+ +SW +MIS + + + M R + T +++
Sbjct: 112 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNV---RPNVYTYSSV 168
Query: 158 LSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNV 217
L +C+G S RM+H + G E ++ V +ALI + K G VFDEM+ +
Sbjct: 169 LRSCNG---MSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDA 225
Query: 218 VTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGL 277
+ W ++I G AQN + L LF +M+ T S L AC+G+ L G + H
Sbjct: 226 IVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVH 285
Query: 278 LWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEA 337
+ K DL + +AL+D+Y KCGSLE A ++F +E D ++ + ++ AQNG+ +EA
Sbjct: 286 IVKY--DQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEA 343
Query: 338 IQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSN--GLI 395
+++F R+ + G + + + VL L G + +KK + +P + +I
Sbjct: 344 LKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDG-WYYFRSMKKLYGIDPVREHYGCMI 402
Query: 396 NMYSKCGELHDSLQVFYEM-TQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTD 454
++ K G+L D++++ EM + ++++W +++ A + L Y +V + P D
Sbjct: 403 DLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRN--MVLAEYAAKKVIALDPED 460
Query: 455 VTFLSLL 461
+LL
Sbjct: 461 AGTYTLL 467
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 67/126 (53%), Gaps = 13/126 (10%)
Query: 36 VLNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKC 95
+ A L+S+L C L LG H I+K +D L + N+L+ MY KC
Sbjct: 257 IAEQATLTSVLRACTGLALLELGMQAHVHIVK------YDQD----LILNNALVDMYCKC 306
Query: 96 GELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLT 155
G L+DA+++F++M RD ++W++MISG +N + F++M S T + + T+
Sbjct: 307 GSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGT---KPNYITIV 363
Query: 156 TMLSAC 161
+L AC
Sbjct: 364 GVLFAC 369
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 318 bits (814), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 186/581 (32%), Positives = 308/581 (53%), Gaps = 17/581 (2%)
Query: 54 NLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDT 113
+L G IHA +IK F S ++V NSL+S+Y K G DA K+F+ MP RD
Sbjct: 145 SLEEGKKIHAMVIK----LGFVSD----VYVCNSLISLYMKLGCAWDAEKVFEEMPERDI 196
Query: 114 VSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMI 173
VSWNSMISG+L D + FK+M + RF + + L AC + + I
Sbjct: 197 VSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRF---STMSALGACSHVYSPKMGKEI 253
Query: 174 HGLVFVGGFER-EITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNEL 232
H E ++ V +++ Y K G ++F+ MI+RN+V W +I A+N
Sbjct: 254 HCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGR 313
Query: 233 YEDGLRLFAQM-RGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIES 291
D F +M + P+ +T ++ L A A+ EGR IHG + G + +E+
Sbjct: 314 VTDAFLCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTIHGYAMRRGFLPHMVLET 369
Query: 292 ALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEV 351
AL+D+Y +CG L+ A IF+ E + +S I+ A+ QNG A+++F + +
Sbjct: 370 ALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVP 429
Query: 352 DANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVF 411
D+ ++++L + SL G++IH+ I+K + N + N L++MY+ CG+L D+ + F
Sbjct: 430 DSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCF 489
Query: 412 YEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVE 471
+ K+ +SWNS+I A+A HG G ++ + EM + P TF SLL ACS +G+V+
Sbjct: 490 NHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVD 549
Query: 472 KGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGA 531
+G E+ SM R++ + P EHY C++D++GR G AK F+E +P +W +LL A
Sbjct: 550 EGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNA 609
Query: 532 CSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEV 591
H D + +FAA+Q+ ++ +VL+ N+Y+ G+W++ M+ KG+++
Sbjct: 610 SRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTS 669
Query: 592 GVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDE 632
S +E + F GD+ H + I+ L + + + +E
Sbjct: 670 SRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEE 710
Score = 180 bits (457), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 124/444 (27%), Positives = 230/444 (51%), Gaps = 17/444 (3%)
Query: 98 LQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYS--RFDKATLT 155
++DA++LFD M D WN MI GF + +F+ SR V++ + D T
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFY-----SRMVFAGVKADTFTYP 134
Query: 156 TMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIER 215
++ + G + IH +V GF ++ V N+LI+ Y K GC +VF+EM ER
Sbjct: 135 FVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPER 194
Query: 216 NVVTWTAVISG-LAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKI 274
++V+W ++ISG LA + + L LF +M P+ + +S+L ACS V + G++I
Sbjct: 195 DIVSWNSMISGYLALGDGF-SSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEI 253
Query: 275 HGLLWKLGMQS-DLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGF 333
H + +++ D+ + ++++D+YSK G + A +IF + + V+ V++ +A+NG
Sbjct: 254 HCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGR 313
Query: 334 EEEAIQIFTRIVTL-GIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSN 392
+A F ++ G++ D +L +++ G+ IH +++ F + +
Sbjct: 314 VTDAFLCFQKMSEQNGLQPDVITSINLLP----ASAILEGRTIHGYAMRRGFLPHMVLET 369
Query: 393 GLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAP 452
LI+MY +CG+L + +F M +KN ISWNS+IAA+ ++G AL+ ++E+ + P
Sbjct: 370 ALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVP 429
Query: 453 TDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNF 512
T S+L A + + + +G E + + R + +V M G L++A+
Sbjct: 430 DSTTIASILPAYAESLSLSEGREIHAYIVKS-RYWSNTIILNSLVHMYAMCGDLEDARKC 488
Query: 513 IEGLPENRGVLVWQALLGACSIHG 536
+ + V+ W +++ A ++HG
Sbjct: 489 FNHILL-KDVVSWNSIIMAYAVHG 511
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 100/215 (46%), Gaps = 28/215 (13%)
Query: 7 FNTHLPSWVDSLKSKAPISQYPFPATSESVLNHAHLSSLLSVCGRDGNLHLGSSIHARII 66
+N+ + ++V + K+ + + + S V + ++S+L +L G IHA I+
Sbjct: 399 WNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIV 458
Query: 67 KQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRN 126
K S + + NSL+ MY+ CG+L+DA K F+ + ++D VSWNS+I + +
Sbjct: 459 K--------SRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVH 510
Query: 127 RDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMI-HGLVFVGGFERE 185
F +M SR +K+T ++L+AC S+S M+ G + +RE
Sbjct: 511 GFGRISVWLFSEMIASRV---NPNKSTFASLLAAC------SISGMVDEGWEYFESMKRE 561
Query: 186 ITVGNALITSYFKC--------GCFCQGRQVFDEM 212
+ + ++ C G F ++ +EM
Sbjct: 562 YGIDPGI--EHYGCMLDLIGRTGNFSAAKRFLEEM 594
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 316 bits (809), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 190/622 (30%), Positives = 336/622 (54%), Gaps = 16/622 (2%)
Query: 32 TSESVLNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSM 91
T +++ + S LL C + ++ +I A ++K F + + V SL
Sbjct: 58 TCDTLTTTHNFSQLLRQCIDERSISGIKTIQAHMLKS----GFPAEISGSKLVDASL--- 110
Query: 92 YSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDK 151
KCG++ A ++FD M R V+WNS+I+ +++R ++ M + + D+
Sbjct: 111 --KCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLP---DE 165
Query: 152 ATLTTMLSACDGPEFSSVSRMIHGLVFVGGFE-REITVGNALITSYFKCGCFCQGRQVFD 210
TL+++ A ++ HGL + G E + VG+AL+ Y K G + + V D
Sbjct: 166 YTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLD 225
Query: 211 EMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAE 270
+ E++VV TA+I G +Q + ++ F M V PN TY S L++C ++ +
Sbjct: 226 RVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGN 285
Query: 271 GRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQ 330
G+ IHGL+ K G +S L +++L+ +Y +C ++ + ++F+ E + VS T ++ Q
Sbjct: 286 GKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQ 345
Query: 331 NGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFV 390
NG EE A+ F +++ I+ ++ +S+ L G+QIH ++ K F ++ +
Sbjct: 346 NGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYA 405
Query: 391 SNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGI 450
+GLI++Y KCG + VF +++ + IS N++I ++A++G G AL +E M G+
Sbjct: 406 GSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGL 465
Query: 451 APTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAK 510
P DVT LS+L AC+++ LVE+G E S +D ++ ++HYAC+VD+LGRAG L+EA+
Sbjct: 466 QPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD-KIMLTNDHYACMVDLLGRAGRLEEAE 524
Query: 511 NFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEG 570
+ N +++W+ LL AC +H EM + +++ P +LM+N+Y++ G
Sbjct: 525 MLTTEVI-NPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTG 583
Query: 571 KWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKL-HPQADIIFLELSRLLKHL 629
KW +MK+ + K +SW+EI+K+ +F+ GD HP ++ I L L+K
Sbjct: 584 KWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKS 643
Query: 630 KDEGYVPDKRCILYYLDQDKKD 651
KD GYV DK C+ +++ K+
Sbjct: 644 KDLGYVEDKSCVFQDMEETAKE 665
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 315 bits (808), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 186/613 (30%), Positives = 319/613 (52%), Gaps = 46/613 (7%)
Query: 61 IHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMI 120
+HARI+ FS F+ + L+S Y++ + A+ +FD + VR+ S+N+++
Sbjct: 44 LHARIV----VFSIKPDN----FLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALL 95
Query: 121 SGFL-RNRDFDAGFRFFKQMSES--RTVYSRFDKATLTTMLSA---CDGPEFSSVSRMIH 174
+ R FDA F + S + +R D +++ +L A CD S++R +H
Sbjct: 96 IAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVH 155
Query: 175 GLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYE 234
G V GGF+ ++ VGN +IT Y KC R+VFDEM ER+VV+W ++ISG +Q+ +E
Sbjct: 156 GFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFE 215
Query: 235 DGLRLFAQMRGGS-VSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESAL 293
D +++ M S PN +T +S AC L G ++H + + +Q DL + +A+
Sbjct: 216 DCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAV 275
Query: 294 MDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDA 353
+ Y+KCGSL+ A +F+ E D V+ I+ + +G +EA+ +F+ + ++G+
Sbjct: 276 IGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWN 335
Query: 354 NMVS-------------------------------AVLGVFGVGTSLPLGKQIHSLIIKK 382
M+S ++L ++L GK+IH+ I+
Sbjct: 336 AMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRN 395
Query: 383 NFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFY 442
N +V+ +I+ Y+K G L + +VF ++ I+W ++I A+A HGD A +
Sbjct: 396 GADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLF 455
Query: 443 EEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGR 502
++M+ G P DVT ++L A +H+G + SM + + P EHYAC+V +L R
Sbjct: 456 DQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSR 515
Query: 503 AGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLM 562
AG L +A FI +P + VW ALL S+ GD E+ +FA D+L P ++ + +M
Sbjct: 516 AGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIM 575
Query: 563 ANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLEL 622
AN+Y+ G+W+E +MK G+ K G SWIE +K + SF+ D ++ ++ +
Sbjct: 576 ANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEII 635
Query: 623 SRLLKHLKDEGYV 635
L++ + D+ Y+
Sbjct: 636 EGLVESMSDKEYI 648
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 120/274 (43%), Gaps = 12/274 (4%)
Query: 273 KIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNG 332
++H + ++ D + S L+ Y++ A +F+ + S +L+A+
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSRE 102
Query: 333 FEEEAIQIFTRIV------TLGIEVDANMVSAVLGVFGVGTSLPLG---KQIHSLIIKKN 383
+A +F + + D+ +S VL LG +Q+H +I+
Sbjct: 103 MYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGG 162
Query: 384 FSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYE 443
F + FV NG+I Y+KC + + +VF EM++++ +SWNS+I+ +++ G + Y+
Sbjct: 163 FDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYK 222
Query: 444 EM-RVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGR 502
M P VT +S+ AC + + G+E M +H S A V+ +
Sbjct: 223 AMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNA-VIGFYAK 281
Query: 503 AGLLKEAKNFIEGLPENRGVLVWQALLGACSIHG 536
G L A+ + + E V + A++ HG
Sbjct: 282 CGSLDYARALFDEMSEKDSV-TYGAIISGYMAHG 314
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 141/323 (43%), Gaps = 46/323 (14%)
Query: 31 ATSESVLNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLS 90
A S+ N + S+ CG+ +L G +H ++I ++ + L + N+++
Sbjct: 226 ACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMI--------ENHIQMDLSLCNAVIG 277
Query: 91 MYSKCGELQDAIKLFDRMPVRDTV-------------------------------SWNSM 119
Y+KCG L A LFD M +D+V +WN+M
Sbjct: 278 FYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAM 337
Query: 120 ISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFV 179
ISG ++N + F++M SR + TL+++L + + IH
Sbjct: 338 ISGLMQNNHHEEVINSFREMIRCG---SRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIR 394
Query: 180 GGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRL 239
G + I V ++I +Y K G ++VFD +R+++ WTA+I+ A + + L
Sbjct: 395 NGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSL 454
Query: 240 FAQMRGGSVSPN--TLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLY 297
F QM+ P+ TLT + S A SG +A+ +L K ++ + + ++ +
Sbjct: 455 FDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQ-HIFDSMLTKYDIEPGVEHYACMVSVL 513
Query: 298 SKCGSLEGAWQIFESAEELDGVS 320
S+ G L A + F S +D ++
Sbjct: 514 SRAGKLSDAME-FISKMPIDPIA 535
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 315 bits (807), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 179/573 (31%), Positives = 315/573 (54%), Gaps = 8/573 (1%)
Query: 82 LFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSE 141
LFV +S +SMY++ G+++ + ++FD R+ WN+MI +++N F +
Sbjct: 251 LFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIG 310
Query: 142 SRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGC 201
S+ + S D+ T SA + + R HG V E I + N+L+ Y +CG
Sbjct: 311 SKEIVS--DEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGS 368
Query: 202 FCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMA 261
+ VF M ER+VV+W +IS QN L ++GL L +M+ + +T + L A
Sbjct: 369 VHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSA 428
Query: 262 CSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESA--EELDGV 319
S ++ G++ H L + G+Q + + S L+D+YSK G + + ++FE + E D
Sbjct: 429 ASNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQA 487
Query: 320 SLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLI 379
+ ++ + QNG E+ +F +++ I +A V+++L S+ LGKQ+H
Sbjct: 488 TWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFS 547
Query: 380 IKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRAL 439
I++ QN FV++ L++MYSK G + + +F + ++NS+++ ++I + +HG G RA+
Sbjct: 548 IRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAI 607
Query: 440 QFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDM 499
+ M+ GI P +TF+++L ACS++GL+++G++ M + + P SEHY C+ DM
Sbjct: 608 SLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDM 667
Query: 500 LGRAGLLKEAKNFIEGLPENRGVL-VWQALLGACSIHGDSEMGKFAADQLILAAPAS--S 556
LGR G + EA F++GL E + +W +LLG+C +HG+ E+ + +++L S
Sbjct: 668 LGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFS 727
Query: 557 APHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQAD 616
VL++N+Y+ E KWK + M+EKG+ KEVG S IEI V+ FV D+ HP +
Sbjct: 728 GYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSS 787
Query: 617 IIFLELSRLLKHLKDEGYVPDKRCILYYLDQDK 649
I+ + L K ++ + ++ + L+ D+
Sbjct: 788 EIYDVIDGLAKDMRGDSFLTTLPTVTPSLELDE 820
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 142/543 (26%), Positives = 244/543 (44%), Gaps = 88/543 (16%)
Query: 43 SSLLSVCGRDGNLHLGSSIHARIIK----------------------QPPFFS------- 73
SS L C NL G ++H +I+ P F
Sbjct: 111 SSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKV 170
Query: 74 FDSSRRNALFVWNSLLSMYSKCGELQDAIKLFD---RMPVRDT-VSWNSMISGFLRNRDF 129
FD+ RR + WN+L+S Y K G +A + F RM V+ + VS+
Sbjct: 171 FDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSF------------- 217
Query: 130 DAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFE--REIT 187
F +S SR++ + + +GL+ G E +++
Sbjct: 218 ---VNVFPAVSISRSIKK----------------------ANVFYGLMLKLGDEYVKDLF 252
Query: 188 VGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGS 247
V ++ I+ Y + G R+VFD +ERN+ W +I QN+ + + LF + G
Sbjct: 253 VVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSK 312
Query: 248 -VSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGA 306
+ + +TYL + A S +Q + GR+ HG + K + + I ++LM +YS+CGS+ +
Sbjct: 313 EIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKS 372
Query: 307 WQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVG 366
+ +F S E D VS ++ AF QNG ++E + + + G ++D V+A+L
Sbjct: 373 FGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNL 432
Query: 367 TSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVF--YEMTQKNSISWNS 424
+ +GKQ H+ +I++ Q +++ LI+MYSK G + S ++F +++ +WNS
Sbjct: 433 RNKEIGKQTHAFLIRQGI-QFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNS 491
Query: 425 VIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGME---FLVSMT 481
+I+ + ++G + + +M I P VT S+L ACS G V+ G + F +
Sbjct: 492 MISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQY 551
Query: 482 RDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMG 541
D + S +VDM +AG +K A++ E V +LG +G MG
Sbjct: 552 LDQNVFVAS----ALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILG----YGQHGMG 603
Query: 542 KFA 544
+ A
Sbjct: 604 ERA 606
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/476 (26%), Positives = 226/476 (47%), Gaps = 39/476 (8%)
Query: 87 SLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVY 146
S LS + G Q A +LFD +P TV WN++I GF+ N F+ +M ++ +
Sbjct: 44 SRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKT-APF 102
Query: 147 SRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKC----GCF 202
+ D T ++ L AC + + +H + V N+L+ Y C CF
Sbjct: 103 TNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCF 162
Query: 203 CQG--RQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLM 260
R+VFD M +NVV W +IS + + R F M V P+ +++++
Sbjct: 163 EYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFP 222
Query: 261 ACSGVQALAEGRKIHGLLWKLGMQ--SDLCIESALMDLYSKCGSLEGAWQIFESAEELDG 318
A S +++ + +GL+ KLG + DL + S+ + +Y++ G +E + ++F+S E +
Sbjct: 223 AVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNI 282
Query: 319 VSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGT--SLPLGKQIH 376
++ + QN E+I++F + E+ ++ V+ +L V + LG+Q H
Sbjct: 283 EVWNTMIGVYVQNDCLVESIELFLEAIG-SKEIVSDEVTYLLAASAVSALQQVELGRQFH 341
Query: 377 SLIIKKNFSQNPFV-SNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDG 435
+ KNF + P V N L+ MYS+CG +H S VF M +++ +SWN++I+AF ++G
Sbjct: 342 GF-VSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLD 400
Query: 436 SRALQFYEEMRVGGIAPTDVTFLSLLHACS-----------HAGLVEKGMEFLVSMTRDH 484
L EM+ G +T +LL A S HA L+ +G++F
Sbjct: 401 DEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQF-------- 452
Query: 485 RLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLP-ENRGVLVWQALLGACSIHGDSE 539
+ ++DM ++GL++ ++ EG R W +++ + +G +E
Sbjct: 453 -----EGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTE 503
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 185/363 (50%), Gaps = 11/363 (3%)
Query: 78 RRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFK 137
R + + NSL+ MYS+CG + + +F M RD VSWN+MIS F++N D G
Sbjct: 349 RELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVY 408
Query: 138 QMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYF 197
+M + + D T+T +LSA + + H + G + E + + LI Y
Sbjct: 409 EMQKQGF---KIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMYS 464
Query: 198 KCGCFCQGRQVFD--EMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTY 255
K G +++F+ ER+ TW ++ISG QN E +F +M ++ PN +T
Sbjct: 465 KSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTV 524
Query: 256 LSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEE 315
S L ACS + ++ G+++HG + + ++ + SAL+D+YSK G+++ A +F +E
Sbjct: 525 ASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKE 584
Query: 316 LDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQI 375
+ V+ T +++ + Q+G E AI +F + GI+ DA AVL + G +I
Sbjct: 585 RNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKI 644
Query: 376 HSLIIKKNFSQNPFVSN--GLINMYSKCGELHDSLQVFYEMTQKNSIS--WNSVIAAFAR 431
+++ ++ P + + +M + G ++++ + + ++ +I+ W S++ +
Sbjct: 645 FEE-MREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKL 703
Query: 432 HGD 434
HG+
Sbjct: 704 HGE 706
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 119/240 (49%), Gaps = 14/240 (5%)
Query: 37 LNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCG 96
+++ +++LLS N +G HA +I+Q F +S L+ MYSK G
Sbjct: 417 IDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSY---------LIDMYSKSG 467
Query: 97 ELQDAIKLFD--RMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATL 154
++ + KLF+ RD +WNSMISG+ +N + F F++M E R + T+
Sbjct: 468 LIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNI---RPNAVTV 524
Query: 155 TTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIE 214
++L AC + + +HG ++ + V +AL+ Y K G +F + E
Sbjct: 525 ASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKE 584
Query: 215 RNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKI 274
RN VT+T +I G Q+ + E + LF M+ + P+ +T+++ L ACS + EG KI
Sbjct: 585 RNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKI 644
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 315 bits (806), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 178/560 (31%), Positives = 302/560 (53%), Gaps = 10/560 (1%)
Query: 95 CGE--LQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKA 152
CG+ L++A++L R ++ ++I + R + G + + + S V
Sbjct: 65 CGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWN 124
Query: 153 TLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEM 212
L M + C S + VF R++ N ++ Y + G + R++FDEM
Sbjct: 125 RLLRMYAKCG-------SLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEM 177
Query: 213 IERNVVTWTAVISGLAQNELYEDGLRLFAQM-RGGSVSPNTLTYLSSLMACSGVQALAEG 271
E++ +WTA+++G + + E+ L L++ M R + PN T ++ A + V+ + G
Sbjct: 178 TEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRG 237
Query: 272 RKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQN 331
++IHG + + G+ SD + S+LMD+Y KCG ++ A IF+ E D VS T ++ + ++
Sbjct: 238 KEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKS 297
Query: 332 GFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVS 391
E +F+ +V + + VL T+ LGKQ+H + + F F S
Sbjct: 298 SRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFAS 357
Query: 392 NGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIA 451
+ L++MY+KCG + + V + + +SW S+I A++G AL++++ + G
Sbjct: 358 SSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTK 417
Query: 452 PTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKN 511
P VTF+++L AC+HAGLVEKG+EF S+T HRLS S+HY C+VD+L R+G ++ K+
Sbjct: 418 PDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKS 477
Query: 512 FIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGK 571
I +P +W ++LG CS +G+ ++ + AA +L P + +V MANIY+A GK
Sbjct: 478 VISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGK 537
Query: 572 WKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKD 631
W+E KRM+E GV K G SW EI ++ F+ D HP + I L L K +K+
Sbjct: 538 WEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKE 597
Query: 632 EGYVPDKRCILYYLDQDKKD 651
EGYVP +L+ ++ ++K+
Sbjct: 598 EGYVPATSLVLHDVEDEQKE 617
Score = 170 bits (430), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 121/466 (25%), Positives = 219/466 (46%), Gaps = 52/466 (11%)
Query: 44 SLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIK 103
+L+ VC + L G +H I + F + +WN LL MY+KCG L DA K
Sbjct: 90 NLIQVCSQTRALEEGKKVHEHI-RTSGFVP-------GIVIWNRLLRMYAKCGSLVDARK 141
Query: 104 LFDRMPVRDTVSWN-------------------------------SMISGFLRNRDFDAG 132
+FD MP RD SWN +M++G+++ +
Sbjct: 142 VFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEA 201
Query: 133 FRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNAL 192
+ M R SR + T++ ++A + + IHG + G + + + ++L
Sbjct: 202 LVLYSLM--QRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSL 259
Query: 193 ITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNT 252
+ Y KCGC + R +FD+++E++VV+WT++I ++ + +G LF+++ G PN
Sbjct: 260 MDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNE 319
Query: 253 LTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFES 312
T+ L AC+ + G+++HG + ++G S+L+D+Y+KCG++E A + +
Sbjct: 320 YTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDG 379
Query: 313 AEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVD----ANMVSAVLGVFGVGTS 368
+ D VS T ++ AQNG +EA++ F ++ G + D N++SA V
Sbjct: 380 CPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKG 439
Query: 369 LPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNS-ISWNSVIA 427
L +S+ K S L+++ ++ G V EM K S W SV+
Sbjct: 440 LEF---FYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLG 496
Query: 428 AFARHGDGSRALQFYEEMRVGGIAPTD-VTFLSLLHACSHAGLVEK 472
+ +G+ A + +E+ I P + VT++++ + + AG E+
Sbjct: 497 GCSTYGNIDLAEEAAQEL--FKIEPENPVTYVTMANIYAAAGKWEE 540
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 314 bits (804), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 181/525 (34%), Positives = 299/525 (56%), Gaps = 8/525 (1%)
Query: 133 FRFFKQ---MSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVG 189
FRF + +S+S V+S A ++++++A + R++H V R +G
Sbjct: 12 FRFLYRRRFLSQSSFVHSL--DANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIG 69
Query: 190 NALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVS 249
+ L+ Y + G ++FDEM ER++V+W ++ISG + + ++M V
Sbjct: 70 DQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVG 129
Query: 250 --PNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAW 307
PN +T+LS + AC + EGR IHGL+ K G+ ++ + +A ++ Y K G L +
Sbjct: 130 FRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSC 189
Query: 308 QIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGT 367
++FE + VS ++V QNG E+ + F +G E D AVL
Sbjct: 190 KLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMG 249
Query: 368 SLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIA 427
+ L + IH LI+ FS N ++ L+++YSK G L DS VF+E+T +S++W +++A
Sbjct: 250 VVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLA 309
Query: 428 AFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLS 487
A+A HG G A++ +E M GI+P VTF LL+ACSH+GLVE+G + +M++ +R+
Sbjct: 310 AYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRID 369
Query: 488 PRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQ 547
PR +HY+C+VD+LGR+GLL++A I+ +P VW ALLGAC ++ D+++G AA++
Sbjct: 370 PRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAER 429
Query: 548 LILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVV 607
L P +V+++NIYSA G WK+ + MK+KG+ + G S+IE ++ FVV
Sbjct: 430 LFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVV 489
Query: 608 GDKLHPQADIIFLELSRLLKHLKDE-GYVPDKRCILYYLDQDKKD 651
GD HP+++ I +L + K +K E GY +L+ + +D K+
Sbjct: 490 GDWSHPESEKIQKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVKE 534
Score = 162 bits (410), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 127/423 (30%), Positives = 206/423 (48%), Gaps = 25/423 (5%)
Query: 40 AHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQ 99
A++SSL++ ++ L +H +++K + R+ F+ + L+ Y + G
Sbjct: 32 ANVSSLIAAVKSCVSIELCRLLHCKVVKSVSY-------RHG-FIGDQLVGCYLRLGHDV 83
Query: 100 DAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLS 159
A KLFD MP RD VSWNS+ISG+ F +M S + R ++ T +M+S
Sbjct: 84 CAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGF-RPNEVTFLSMIS 142
Query: 160 ACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVT 219
AC R IHGLV G E+ V NA I Y K G ++F+++ +N+V+
Sbjct: 143 ACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVS 202
Query: 220 WTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACS--GVQALAEGRKIHGL 277
W +I QN L E GL F R P+ T+L+ L +C GV LA+G IHGL
Sbjct: 203 WNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQG--IHGL 260
Query: 278 LWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEA 337
+ G + CI +AL+DLYSK G LE + +F D ++ T +L A+A +GF +A
Sbjct: 261 IMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDA 320
Query: 338 IQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSN--GLI 395
I+ F +V GI D + +L + GK + K + +P + + ++
Sbjct: 321 IKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFE-TMSKRYRIDPRLDHYSCMV 379
Query: 396 NMYSKCGELHDSLQVFYEM-TQKNSISWNSVIAAFARHGD---GSRALQFYEEMRVGGIA 451
++ + G L D+ + EM + +S W +++ A + D G++A + R+ +
Sbjct: 380 DLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAE-----RLFELE 434
Query: 452 PTD 454
P D
Sbjct: 435 PRD 437
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 131/275 (47%), Gaps = 12/275 (4%)
Query: 38 NHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGE 97
N S++S C G+ G IH ++K F + + V N+ ++ Y K G+
Sbjct: 133 NEVTFLSMISACVYGGSKEEGRCIHGLVMK---FGVLEEVK-----VVNAFINWYGKTGD 184
Query: 98 LQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTM 157
L + KLF+ + +++ VSWN+MI L+N + G +F SR V D+AT +
Sbjct: 185 LTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNM---SRRVGHEPDQATFLAV 241
Query: 158 LSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNV 217
L +C+ +++ IHGL+ GGF + AL+ Y K G VF E+ +
Sbjct: 242 LRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDS 301
Query: 218 VTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGL 277
+ WTA+++ A + D ++ F M +SP+ +T+ L ACS + EG+
Sbjct: 302 MAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFET 361
Query: 278 LWK-LGMQSDLCIESALMDLYSKCGSLEGAWQIFE 311
+ K + L S ++DL + G L+ A+ + +
Sbjct: 362 MSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIK 396
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 313 bits (802), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 175/570 (30%), Positives = 301/570 (52%), Gaps = 16/570 (2%)
Query: 84 VWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESR 143
++ +++ Y++ L DA+ LFD MPVRD VSWNSMISG + D + + F +M E
Sbjct: 68 LYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERS 127
Query: 144 TVYSRFDKATLTTMLSAC-DGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCF 202
V + T M++ C + R+ + + ++ N+++ Y + G
Sbjct: 128 VV-------SWTAMVNGCFRSGKVDQAERLFYQMPV-----KDTAAWNSMVHGYLQFGKV 175
Query: 203 CQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMAC 262
++F +M +NV++WT +I GL QNE + L LF M + + + + AC
Sbjct: 176 DDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITAC 235
Query: 263 SGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLT 322
+ A G ++HGL+ KLG + + ++L+ Y+ C + + ++F+ T
Sbjct: 236 ANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWT 295
Query: 323 VILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKK 382
+L ++ N E+A+ IF+ ++ I + + ++ L +L GK++H + +K
Sbjct: 296 ALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKL 355
Query: 383 NFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFY 442
+ FV N L+ MYS G ++D++ VF ++ +K+ +SWNS+I A+HG G A +
Sbjct: 356 GLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIF 415
Query: 443 EEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRD-HRLSPRSEHYACVVDMLG 501
+M P ++TF LL ACSH G +EKG + M+ + + + +HY C+VD+LG
Sbjct: 416 GQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILG 475
Query: 502 RAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVL 561
R G LKEA+ IE + +VW ALL AC +H D + G+ AA + SSA +VL
Sbjct: 476 RCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVL 535
Query: 562 MANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLE 621
++NIY++ G+W + +MK+ G+ K+ G SW+ I + F GD+ P I+ +
Sbjct: 536 LSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQ--PHCSRIYEK 593
Query: 622 LSRLLKHLKDEGYVPDKRCILYYLDQDKKD 651
L L + LK+ GY PD R L+ ++ ++K+
Sbjct: 594 LEFLREKLKELGYAPDYRSALHDVEDEQKE 623
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 193/427 (45%), Gaps = 62/427 (14%)
Query: 74 FDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGF 133
FD + WNS++S +CG++ A+KLFD MP R VSW +M++G R+ D
Sbjct: 89 FDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAE 148
Query: 134 RFFKQMSESRTV--------YSRFDKA----------------TLTTMLSACDGPEFS-- 167
R F QM T Y +F K + TTM+ D E S
Sbjct: 149 RLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGE 208
Query: 168 --------------SVSR-------------------MIHGLVFVGGFEREITVGNALIT 194
S SR +HGL+ GF E V +LIT
Sbjct: 209 ALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLIT 268
Query: 195 SYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLT 254
Y C R+VFDE + V WTA++SG + N+ +ED L +F+ M S+ PN T
Sbjct: 269 FYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQST 328
Query: 255 YLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAE 314
+ S L +CS + L G+++HG+ KLG+++D + ++L+ +YS G++ A +F
Sbjct: 329 FASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIF 388
Query: 315 ELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQ 374
+ VS I+V AQ+G + A IF +++ L E D + +L L G++
Sbjct: 389 KKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRK 448
Query: 375 IHSLIIK--KNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQK-NSISWNSVIAAFAR 431
+ + + + ++++ +CG+L ++ ++ M K N + W ++++A
Sbjct: 449 LFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRM 508
Query: 432 HGDGSRA 438
H D R
Sbjct: 509 HSDVDRG 515
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 170/367 (46%), Gaps = 16/367 (4%)
Query: 186 ITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRG 245
+++ +IT Y + +FDEM R+VV+W ++ISG + ++LF +M
Sbjct: 66 VSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPE 125
Query: 246 GSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEG 305
SV +++ + + C + + + L +++ ++ D ++++ Y + G ++
Sbjct: 126 RSV----VSWTAMVNGCFRSGKVDQAER---LFYQMPVK-DTAAWNSMVHGYLQFGKVDD 177
Query: 306 AWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGV 365
A ++F+ + +S T ++ QN EA+ +F ++ I+ + + V+
Sbjct: 178 ALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACAN 237
Query: 366 GTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSV 425
+ +G Q+H LIIK F +VS LI Y+ C + DS +VF E + W ++
Sbjct: 238 APAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTAL 297
Query: 426 IAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHR 485
++ ++ + AL + M I P TF S L++CS G ++ G E +
Sbjct: 298 LSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAV---K 354
Query: 486 LSPRSEHYA--CVVDMLGRAGLLKEAKN-FIEGLPENRGVLVWQALLGACSIHGDSEMGK 542
L ++ + +V M +G + +A + FI+ + ++ W +++ C+ HG +
Sbjct: 355 LGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIF--KKSIVSWNSIIVGCAQHGRGKWAF 412
Query: 543 FAADQLI 549
Q+I
Sbjct: 413 VIFGQMI 419
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 126/272 (46%), Gaps = 13/272 (4%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDA 101
+ +++ C H+G +H IIK + +V SL++ Y+ C + D+
Sbjct: 228 FTCVITACANAPAFHMGIQVHGLIIKLGFLYE--------EYVSASLITFYANCKRIGDS 279
Query: 102 IKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSAC 161
K+FD W +++SG+ N+ + F M + + +++T + L++C
Sbjct: 280 RKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILP---NQSTFASGLNSC 336
Query: 162 DGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWT 221
+ +HG+ G E + VGN+L+ Y G VF ++ ++++V+W
Sbjct: 337 SALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWN 396
Query: 222 AVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKL 281
++I G AQ+ + +F QM + P+ +T+ L ACS L +GRK+ +
Sbjct: 397 SIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSG 456
Query: 282 GMQSDLCIE--SALMDLYSKCGSLEGAWQIFE 311
D I+ + ++D+ +CG L+ A ++ E
Sbjct: 457 INHIDRKIQHYTCMVDILGRCGKLKEAEELIE 488
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 109/253 (43%), Gaps = 19/253 (7%)
Query: 38 NHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGE 97
N + +S L+ C G L G +H +K FV NSL+ MYS G
Sbjct: 325 NQSTFASGLNSCSALGTLDWGKEMHGVAVKL--------GLETDAFVGNSLVVMYSDSGN 376
Query: 98 LQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTM 157
+ DA+ +F ++ + VSWNS+I G ++ F F QM + D+ T T +
Sbjct: 377 VNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIR---LNKEPDEITFTGL 433
Query: 158 LSACDGPEFSSVSRMIHGLVFVG--GFEREITVGNALITSYFKCGCFCQGRQVFDEMIER 215
LSAC F R + + G +R+I ++ +CG + ++ + M+ +
Sbjct: 434 LSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVK 493
Query: 216 -NVVTWTAVISGLAQNELYEDGLRLFAQMRG-GSVSPNTLTYLSSLMACSG----VQALA 269
N + W A++S + + G + A + S S LS++ A +G V L
Sbjct: 494 PNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLR 553
Query: 270 EGRKIHGLLWKLG 282
K +G++ K G
Sbjct: 554 VKMKKNGIMKKPG 566
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 313 bits (802), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 162/497 (32%), Positives = 275/497 (55%), Gaps = 2/497 (0%)
Query: 157 MLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERN 216
+L+AC + +H + + + L+ Y KC C R+V DEM E+N
Sbjct: 58 LLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKN 117
Query: 217 VVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHG 276
VV+WTA+IS +Q + L +FA+M PN T+ + L +C L G++IHG
Sbjct: 118 VVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHG 177
Query: 277 LLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEE 336
L+ K S + + S+L+D+Y+K G ++ A +IFE E D VS T I+ +AQ G +EE
Sbjct: 178 LIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEE 237
Query: 337 AIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLIN 396
A+++F R+ + G+ + +++L L GKQ H ++++ + N LI+
Sbjct: 238 ALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLID 297
Query: 397 MYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMR-VGGIAPTDV 455
MYSKCG L + ++F M ++ +ISWN+++ +++HG G L+ + MR + P V
Sbjct: 298 MYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAV 357
Query: 456 TFLSLLHACSHAGLVEKGMEFLVSMTR-DHRLSPRSEHYACVVDMLGRAGLLKEAKNFIE 514
T L++L CSH + + G+ M ++ P +EHY C+VDMLGRAG + EA FI+
Sbjct: 358 TLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIK 417
Query: 515 GLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKE 574
+P V +LLGAC +H ++G+ +LI P ++ +V+++N+Y++ G+W +
Sbjct: 418 RMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWAD 477
Query: 575 RAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDEGY 634
M +K V KE G SWI+ ++ + F D+ HP+ + + ++ + +K GY
Sbjct: 478 VNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGY 537
Query: 635 VPDKRCILYYLDQDKKD 651
VPD C+LY +D+++K+
Sbjct: 538 VPDLSCVLYDVDEEQKE 554
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 210/426 (49%), Gaps = 26/426 (6%)
Query: 5 RKFNTHLPSWVDSLKSKAPISQYPFPAT-SESVLNHAHL---------SSLLSVCGRDGN 54
R F++ ++V L++ PISQ E++L A L +LL+ C
Sbjct: 10 RSFSSSPTNYV--LQTILPISQLCSNGRLQEALLEMAMLGPEMGFHGYDALLNACLDKRA 67
Query: 55 LHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTV 114
L G +HA +IK + A ++ LL Y KC L+DA K+ D MP ++ V
Sbjct: 68 LRDGQRVHAHMIK--------TRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVV 119
Query: 115 SWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIH 174
SW +MIS + + F +M S + F T T+L++C + + IH
Sbjct: 120 SWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEF---TFATVLTSCIRASGLGLGKQIH 176
Query: 175 GLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYE 234
GL+ ++ I VG++L+ Y K G + R++F+ + ER+VV+ TA+I+G AQ L E
Sbjct: 177 GLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDE 236
Query: 235 DGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALM 294
+ L +F ++ +SPN +TY S L A SG+ L G++ H + + + ++++L+
Sbjct: 237 EALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLI 296
Query: 295 DLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLG-IEVDA 353
D+YSKCG+L A ++F++ E +S +LV ++++G E +++F + ++ DA
Sbjct: 297 DMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDA 356
Query: 354 NMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSN--GLINMYSKCGELHDSLQVF 411
+ AVL G G I ++ + P + +++M + G + ++ +
Sbjct: 357 VTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFI 416
Query: 412 YEMTQK 417
M K
Sbjct: 417 KRMPSK 422
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 147/286 (51%), Gaps = 10/286 (3%)
Query: 255 YLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAE 314
Y + L AC +AL +G+++H + K + + L+ Y KC LE A ++ +
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 114
Query: 315 ELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQ 374
E + VS T ++ ++Q G EA+ +F ++ + + + VL + L LGKQ
Sbjct: 115 EKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQ 174
Query: 375 IHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGD 434
IH LI+K N+ + FV + L++MY+K G++ ++ ++F + +++ +S ++IA +A+ G
Sbjct: 175 IHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGL 234
Query: 435 GSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYA 494
AL+ + + G++P VT+ SLL A S L++ G + H L YA
Sbjct: 235 DEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQ-----AHCHVLRRELPFYA 289
Query: 495 C----VVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHG 536
++DM + G L A+ + +PE R + W A+L S HG
Sbjct: 290 VLQNSLIDMYSKCGNLSYARRLFDNMPE-RTAISWNAMLVGYSKHG 334
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 102/215 (47%), Gaps = 10/215 (4%)
Query: 328 FAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQN 387
NG +EA+ + LG E+ + A+L +L G+++H+ +IK +
Sbjct: 30 LCSNGRLQEAL---LEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPA 86
Query: 388 PFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRV 447
++ L+ Y KC L D+ +V EM +KN +SW ++I+ +++ G S AL + EM
Sbjct: 87 TYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMR 146
Query: 448 GGIAPTDVTFLSLLHACSHA---GLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAG 504
P + TF ++L +C A GL ++ +V D + S ++DM +AG
Sbjct: 147 SDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSS----LLDMYAKAG 202
Query: 505 LLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSE 539
+KEA+ E LPE V + G + D E
Sbjct: 203 QIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEE 237
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 310 bits (795), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 149/438 (34%), Positives = 266/438 (60%), Gaps = 2/438 (0%)
Query: 216 NVVTWTAVISGLAQNELYEDGLRLFAQMR-GGSVSPNTLTYLSSLMACSGVQALAEGRKI 274
NV W +I G A+ L+ +MR G V P+T TY + A + + + G I
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 275 HGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFE 334
H ++ + G S + ++++L+ LY+ CG + A+++F+ E D V+ ++ FA+NG
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKP 203
Query: 335 EEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGL 394
EEA+ ++T + + GI+ D + ++L +L LGK++H +IK ++N SN L
Sbjct: 204 EEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVL 263
Query: 395 INMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMR-VGGIAPT 453
+++Y++CG + ++ +F EM KNS+SW S+I A +G G A++ ++ M G+ P
Sbjct: 264 LDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPC 323
Query: 454 DVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFI 513
++TF+ +L+ACSH G+V++G E+ M ++++ PR EH+ C+VD+L RAG +K+A +I
Sbjct: 324 EITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYI 383
Query: 514 EGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWK 573
+ +P V++W+ LLGAC++HGDS++ +FA Q++ P S +VL++N+Y++E +W
Sbjct: 384 KSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWS 443
Query: 574 ERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDEG 633
+ K+M GV K G S +E+ +V F++GDK HPQ+D I+ +L + L+ EG
Sbjct: 444 DVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEG 503
Query: 634 YVPDKRCILYYLDQDKKD 651
YVP + +++++K+
Sbjct: 504 YVPQISNVYVDVEEEEKE 521
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 176/349 (50%), Gaps = 20/349 (5%)
Query: 101 AIKLFDRM--PVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTML 158
A K+F ++ P+ + WN++I G+ + + F +++M S V D T ++
Sbjct: 72 AHKVFSKIEKPI-NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEP--DTHTYPFLI 128
Query: 159 SACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVV 218
A + IH +V GF I V N+L+ Y CG +VFD+M E+++V
Sbjct: 129 KAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLV 188
Query: 219 TWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLL 278
W +VI+G A+N E+ L L+ +M + P+ T +S L AC+ + AL G+++H +
Sbjct: 189 AWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM 248
Query: 279 WKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAI 338
K+G+ +L + L+DLY++CG +E A +F+ + + VS T ++V A NGF +EAI
Sbjct: 249 IKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAI 308
Query: 339 QIFTRIVT----LGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLI--IKKNFSQNPFVSN 392
++F + + L E+ +G+ + + K+ +++ + P + +
Sbjct: 309 ELFKYMESTEGLLPCEI------TFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEH 362
Query: 393 --GLINMYSKCGELHDSLQVFYEMT-QKNSISWNSVIAAFARHGDGSRA 438
++++ ++ G++ + + M Q N + W +++ A HGD A
Sbjct: 363 FGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 411
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 144/267 (53%), Gaps = 23/267 (8%)
Query: 53 GNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRD 112
++ LG +IH+ +I+ S + ++V NSLL +Y+ CG++ A K+FD+MP +D
Sbjct: 135 ADVRLGETIHSVVIR--------SGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKD 186
Query: 113 TVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRM 172
V+WNS+I+GF N + + +M+ S+ + + D T+ ++LSAC ++ +
Sbjct: 187 LVAWNSVINGFAENGKPEEALALYTEMN-SKGI--KPDGFTIVSLLSACAKIGALTLGKR 243
Query: 173 IHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNEL 232
+H + G R + N L+ Y +CG + + +FDEM+++N V+WT++I GLA N
Sbjct: 244 VHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGF 303
Query: 233 YEDGLRLFAQMRGGS-VSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIES 291
++ + LF M + P +T++ L ACS + EG + + M+ + IE
Sbjct: 304 GKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFE-----YFRRMREEYKIEP 358
Query: 292 ------ALMDLYSKCGSLEGAWQIFES 312
++DL ++ G ++ A++ +S
Sbjct: 359 RIEHFGCMVDLLARAGQVKKAYEYIKS 385
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 10/120 (8%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDA 101
+ SLLS C + G L LG +H +IK + SS N LL +Y++CG +++A
Sbjct: 225 IVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSS--------NVLLDLYARCGRVEEA 276
Query: 102 IKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSAC 161
LFD M +++VSW S+I G N FK M + + + T +L AC
Sbjct: 277 KTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLP--CEITFVGILYAC 334
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 309 bits (791), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 184/564 (32%), Positives = 308/564 (54%), Gaps = 29/564 (5%)
Query: 74 FDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVR-DTVSWNSMISGFLRNRDFDAG 132
FD + W +++ Y K G++++A +LFDR+ R + V+W +M+SG+LR++
Sbjct: 69 FDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIA 128
Query: 133 FRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGL-VFVGGFEREITVGNA 191
F++M E V + TM+ DG ++ R+ L +F ER I N+
Sbjct: 129 EMLFQEMPERNVV-------SWNTMI---DG--YAQSGRIDKALELFDEMPERNIVSWNS 176
Query: 192 LITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPN 251
++ + + G + +F+ M R+VV+WTA++ GLA+N ++ RLF M N
Sbjct: 177 MVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCM----PERN 232
Query: 252 TLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFE 311
+++ + + + + E + L+++ + D + ++ + + + A +F+
Sbjct: 233 IISWNAMITGYAQNNRIDEADQ----LFQVMPERDFASWNTMITGFIRNREMNKACGLFD 288
Query: 312 SAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLG-IEVDANMVSAVLGVFGVGTSLP 370
E + +S T ++ + +N EEA+ +F++++ G ++ + ++L L
Sbjct: 289 RMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLV 348
Query: 371 LGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYE--MTQKNSISWNSVIAA 428
G+QIH LI K +N V++ L+NMYSK GEL + ++F + Q++ ISWNS+IA
Sbjct: 349 EGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAV 408
Query: 429 FARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSP 488
+A HG G A++ Y +MR G P+ VT+L+LL ACSHAGLVEKGMEF + RD L
Sbjct: 409 YAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPL 468
Query: 489 RSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQL 548
R EHY C+VD+ GRAG LK+ NFI + A+L AC++H + + K ++
Sbjct: 469 REEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKV 528
Query: 549 ILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVG 608
+ + +VLM+NIY+A GK +E A +MKEKG+ K+ G SW+++ KQ FVVG
Sbjct: 529 LETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVG 588
Query: 609 DKLHPQADIIFLELSRLLKHLKDE 632
DK HPQ F L +L L+++
Sbjct: 589 DKSHPQ----FEALDSILSDLRNK 608
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 180/375 (48%), Gaps = 44/375 (11%)
Query: 177 VFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIER-NVVTWTAVISGLAQNELYED 235
+F G ER++ +IT Y K G + R++FD + R NVVTWTA++SG +++
Sbjct: 68 LFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSI 127
Query: 236 GLRLFAQM-RGGSVSPNTLT--YLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESA 292
LF +M VS NT+ Y S ++ E + + + W ++
Sbjct: 128 AEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSW-----------NS 176
Query: 293 LMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVD 352
++ + G ++ A +FE D VS T ++ A+NG +EA ++F + +
Sbjct: 177 MVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCM------PE 230
Query: 353 ANMVS--AVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQV 410
N++S A++ + + Q+ ++ +++F+ N +I + + E++ + +
Sbjct: 231 RNIISWNAMITGYAQNNRIDEADQLFQVMPERDFAS----WNTMITGFIRNREMNKACGL 286
Query: 411 FYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEM-RVGGIAPTDVTFLSLLHACSH-AG 468
F M +KN ISW ++I + + + AL + +M R G + P T++S+L ACS AG
Sbjct: 287 FDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAG 346
Query: 469 LVEKGMEFLVSMTRDHRLSPRSEHY------ACVVDMLGRAG-LLKEAKNFIEGLPENRG 521
LVE G + H+L +S H + +++M ++G L+ K F GL R
Sbjct: 347 LVE-GQQI-------HQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRD 398
Query: 522 VLVWQALLGACSIHG 536
++ W +++ + HG
Sbjct: 399 LISWNSMIAVYAHHG 413
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 306 bits (784), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 187/595 (31%), Positives = 308/595 (51%), Gaps = 53/595 (8%)
Query: 74 FDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGF 133
FD + WN L+S Y K GE+ +A K+FD MP R+ VSW +++ G++ N D
Sbjct: 71 FDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAE 130
Query: 134 RFFKQMSESRTVYSRFDKATLTTML----------SACD----GPEFSSVSR--MIHGLV 177
F +M E +K + T ML AC P+ +++R MIHGL
Sbjct: 131 SLFWKMPEK-------NKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLC 183
Query: 178 FVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGL 237
G + + R++FDEM ER+V+TWT +++G QN +D
Sbjct: 184 KEGRVD--------------------EAREIFDEMSERSVITWTTMVTGYGQNNRVDDAR 223
Query: 238 RLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLY 297
++F M +++ S LM + + + L+++ + +A++
Sbjct: 224 KIFDVMP----EKTEVSWTSMLMGYVQNGRIEDAEE----LFEVMPVKPVIACNAMISGL 275
Query: 298 SKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVS 357
+ G + A ++F+S +E + S ++ +NGFE EA+ +F + G+ +
Sbjct: 276 GQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLI 335
Query: 358 AVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQK 417
++L V SL GKQ+H+ +++ F + +V++ L+ MY KCGEL S +F K
Sbjct: 336 SILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSK 395
Query: 418 NSISWNSVIAAFARHGDGSRALQFYEEMRVGG-IAPTDVTFLSLLHACSHAGLVEKGMEF 476
+ I WNS+I+ +A HG G AL+ + EM + G P +VTF++ L ACS+AG+VE+G++
Sbjct: 396 DIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKI 455
Query: 477 LVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHG 536
SM + P + HYAC+VDMLGRAG EA I+ + VW +LLGAC H
Sbjct: 456 YESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHS 515
Query: 537 DSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWI 596
++ +F A +LI P +S ++L++N+Y+++G+W + A K MK + V K G SW
Sbjct: 516 QLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWT 575
Query: 597 EIDKQVSSFVVGD-KLHPQADIIFLELSRLLKHLKDEGYVPDKRCILYYLDQDKK 650
E++ +V +F G HP+ + I L L L++ GY PD L+ +D+++K
Sbjct: 576 EVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEK 630
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/383 (20%), Positives = 169/383 (44%), Gaps = 41/383 (10%)
Query: 184 REITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQM 243
+ I+ N+++ YF R++FDEM +RN+++W ++SG +N ++ ++F M
Sbjct: 46 KSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLM 105
Query: 244 RGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSL 303
+V + T L +G +AE L WK+ ++ + L+ G +
Sbjct: 106 PERNVV--SWTALVKGYVHNGKVDVAE-----SLFWKMPEKNKVSWTVMLIGFLQD-GRI 157
Query: 304 EGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVF 363
+ A +++E + D ++ T ++ + G +EA +IF + + MV+ +
Sbjct: 158 DDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTG----Y 213
Query: 364 GVGTSLPLGKQIHSLIIKKN----------FSQN----------------PFVS-NGLIN 396
G + ++I ++ +K + QN P ++ N +I+
Sbjct: 214 GQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMIS 273
Query: 397 MYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVT 456
+ GE+ + +VF M ++N SW +VI R+G AL + M+ G+ PT T
Sbjct: 274 GLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPT 333
Query: 457 FLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGL 516
+S+L C+ + G + + R + + ++ M + G L ++K +
Sbjct: 334 LISILSVCASLASLHHGKQVHAQLVR-CQFDVDVYVASVLMTMYIKCGELVKSKLIFDRF 392
Query: 517 PENRGVLVWQALLGACSIHGDSE 539
P ++ +++W +++ + HG E
Sbjct: 393 P-SKDIIMWNSIISGYASHGLGE 414
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 118/246 (47%), Gaps = 32/246 (13%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDA 101
L S+LSVC +LH G +HA++++ FD ++V + L++MY KCGEL +
Sbjct: 334 LISILSVCASLASLHHGKQVHAQLVR----CQFDVD----VYVASVLMTMYIKCGELVKS 385
Query: 102 IKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSAC 161
+FDR P +D + WNS+ISG+ + + + F +M S + ++ ++ T LSAC
Sbjct: 386 KLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGS--TKPNEVTFVATLSAC 443
Query: 162 DGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKC--------GCFCQGRQVFDEM- 212
S + GL E G IT+++ C G F + ++ D M
Sbjct: 444 -----SYAGMVEEGLKIYESMES--VFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMT 496
Query: 213 IERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSP-NTLTY--LSSLMACSGVQA-L 268
+E + W +++ + + + F + + P N+ TY LS++ A G A +
Sbjct: 497 VEPDAAVWGSLLGACRTHSQLD--VAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADV 554
Query: 269 AEGRKI 274
AE RK+
Sbjct: 555 AELRKL 560
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 306 bits (783), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 196/647 (30%), Positives = 322/647 (49%), Gaps = 51/647 (7%)
Query: 33 SESVLN-HAHLSSLLSVCGR-DGNLHLGSSIHARIIKQPPFFSFDSSRRNALFV-WNSLL 89
+ES+ N ++ S+L VC D L S R + P F + LFV W S L
Sbjct: 27 TESISNDYSRFISILGVCKTTDQFKQLHSQSITRGVAPNPTF------QKKLFVFWCSRL 80
Query: 90 SMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRF 149
G + A KLF ++P D V WN+MI G+ + G R + M +
Sbjct: 81 G-----GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTP--- 132
Query: 150 DKATLTTMLSAC--DGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQ 207
D T +L+ DG + + +H V G + V NAL+ Y CG R
Sbjct: 133 DSHTFPFLLNGLKRDGGALA-CGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARG 191
Query: 208 VFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQA 267
VFD + +V +W +ISG + + YE+ + L +M VSP ++T L L ACS V+
Sbjct: 192 VFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKD 251
Query: 268 LAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVA 327
+++H + + + L +E+AL++ Y+ CG ++ A +IF S + D +S T I+
Sbjct: 252 KDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKG 311
Query: 328 FAQNG--------FEE-----------------------EAIQIFTRIVTLGIEVDANMV 356
+ + G F++ E+++IF + + G+ D +
Sbjct: 312 YVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTM 371
Query: 357 SAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQ 416
+VL SL +G+ I + I K + V N LI+MY KCG + +VF++M Q
Sbjct: 372 VSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQ 431
Query: 417 KNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEF 476
++ +W +++ A +G G A++ + +M+ I P D+T+L +L AC+H+G+V++ +F
Sbjct: 432 RDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKF 491
Query: 477 LVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHG 536
M DHR+ P HY C+VDMLGRAGL+KEA + +P N +VW ALLGA +H
Sbjct: 492 FAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHN 551
Query: 537 DSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWI 596
D M + AA +++ P + A + L+ NIY+ +WK+ +++ + + K G S I
Sbjct: 552 DEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLI 611
Query: 597 EIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDEGYVPDKRCILY 643
E++ FV GDK H Q++ I+++L L + Y+PD +L+
Sbjct: 612 EVNGFAHEFVAGDKSHLQSEEIYMKLEELAQESTFAAYLPDTSELLF 658
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 305 bits (782), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 181/581 (31%), Positives = 307/581 (52%), Gaps = 27/581 (4%)
Query: 53 GNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRD 112
NL+ +HA+II++ + L + L+S S C + A+++F+++ +
Sbjct: 30 ANLNQVKQLHAQIIRR--------NLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPN 81
Query: 113 TVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRF-DKATLTTMLSACDGPEFSSVSR 171
NS+I +N F F +M + F D T +L AC G + V +
Sbjct: 82 VHLCNSLIRAHAQNSQPYQAFFVFSEMQR----FGLFADNFTYPFLLKACSGQSWLPVVK 137
Query: 172 MIHGLVFVGGFEREITVGNALITSYFKCGCFC--QGRQVFDEMIERNVVTWTAVISGLAQ 229
M+H + G +I V NALI Y +CG ++F++M ER+ V+W +++ GL +
Sbjct: 138 MMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVK 197
Query: 230 NELYEDGLRLFAQM-RGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLC 288
D RLF +M + +S NT+ G E K L K+ ++ +
Sbjct: 198 AGELRDARRLFDEMPQRDLISWNTML--------DGYARCREMSKAFELFEKMPERNTVS 249
Query: 289 IESALMDLYSKCGSLEGAWQIFESAE--ELDGVSLTVILVAFAQNGFEEEAIQIFTRIVT 346
+ +M YSK G +E A +F+ + V+ T+I+ +A+ G +EA ++ ++V
Sbjct: 250 WSTMVMG-YSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVA 308
Query: 347 LGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHD 406
G++ DA V ++L L LG +IHS++ + N N +V N L++MY+KCG L
Sbjct: 309 SGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKK 368
Query: 407 SLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSH 466
+ VF ++ +K+ +SWN+++ HG G A++ + MR GI P VTF+++L +C+H
Sbjct: 369 AFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNH 428
Query: 467 AGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQ 526
AGL+++G+++ SM + + L P+ EHY C+VD+LGR G LKEA ++ +P V++W
Sbjct: 429 AGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWG 488
Query: 527 ALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKG 586
ALLGAC +H + ++ K D L+ P + L++NIY+A W+ A +MK G
Sbjct: 489 ALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMG 548
Query: 587 VAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLK 627
V K G S +E++ + F V DK HP++D I+ L L++
Sbjct: 549 VEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSLIE 589
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 304 bits (778), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 192/621 (30%), Positives = 300/621 (48%), Gaps = 76/621 (12%)
Query: 86 NSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTV 145
S ++ +K G + A ++FD MP DTV+WN+M++ + R F Q+ R
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQL---RFS 64
Query: 146 YSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQG 205
++ D + T +LS C R I LV GF + V N+LI Y KC
Sbjct: 65 DAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSA 124
Query: 206 RQVFDEMI--ERNVVTWTAV-------------------------------ISGLAQNEL 232
+VF +M RN VTW ++ ISG A
Sbjct: 125 NKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGK 184
Query: 233 YEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQA-LAEGRKIHGLLWKLGMQSDLCIES 291
E L LF +M P+ T+ S + ACS + + GR +H ++ K G S + ++
Sbjct: 185 LESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKN 244
Query: 292 ALMDLYSKCGS-------------------------------LEGAWQIFESAEELDGVS 320
+++ Y+K GS E A ++F A E + V+
Sbjct: 245 SVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVT 304
Query: 321 LTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLII 380
T ++ + +NG E+A++ F ++ G++ D AVL L GK IH +I
Sbjct: 305 WTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLI 364
Query: 381 KKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQ 440
F +V N L+N+Y+KCG++ ++ + F ++ K+ +SWN+++ AF HG +AL+
Sbjct: 365 HCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALK 424
Query: 441 FYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDML 500
Y+ M GI P +VTF+ LL CSH+GLVE+G SM +D+R+ +H C++DM
Sbjct: 425 LYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMF 484
Query: 501 GRAGLLKEAKNFIEG----LPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASS 556
GR G L EAK+ + ++ W+ LLGACS H +E+G+ + L +A P+
Sbjct: 485 GRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEE 544
Query: 557 APHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQAD 616
VL++N+Y + G+WKE + M E+G+ K G SWIE+ QVS+FVVGD HP+ +
Sbjct: 545 MSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLE 604
Query: 617 IIFLELSRLLKHLKDEGYVPD 637
ELS L L+ E P+
Sbjct: 605 ----ELSETLNCLQHEMRNPE 621
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 121/491 (24%), Positives = 209/491 (42%), Gaps = 70/491 (14%)
Query: 7 FNTHLPSWVDSLKSKAPISQYPFPATSESVLNHAHLSSLLSVCGRDGNLHLGSSIHARII 66
+NT L S+ + I+ + S++ + +++LS C GN+ G I + +I
Sbjct: 38 WNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVI 97
Query: 67 KQPPFFSF--------------DSSRRNALF-----------VWNSLLSMYSKCGELQDA 101
+ S D+ N +F W SLL Y + + A
Sbjct: 98 RSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAA 157
Query: 102 IKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSAC 161
+ +F MP R +WN MISG ++ FK+M ES + D T +++++AC
Sbjct: 158 LDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEF---KPDCYTFSSLMNAC 214
Query: 162 DGPEFSSV-SRMIHGLVFVGGFEREITVGNALITSYFKCG-------------------- 200
+ V RM+H ++ G+ + N++++ Y K G
Sbjct: 215 SADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSW 274
Query: 201 ------CFCQGR-----QVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVS 249
C G +VF E+N+VTWT +I+G +N E LR F +M V
Sbjct: 275 NSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVD 334
Query: 250 PNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQI 309
+ Y + L ACSG+ L G+ IHG L G Q + +AL++LY+KCG ++ A +
Sbjct: 335 SDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRA 394
Query: 310 FESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSL 369
F D VS +L AF +G ++A++++ ++ GI+ D +L +
Sbjct: 395 FGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLV 454
Query: 370 PLGKQIHSLIIKKNFSQNPFVSN---GLINMYSKCGELHDS--LQVFYE---MTQKNSIS 421
G I ++K + P + +I+M+ + G L ++ L Y N+ S
Sbjct: 455 EEGCMIFESMVKD--YRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSS 512
Query: 422 WNSVIAAFARH 432
W +++ A + H
Sbjct: 513 WETLLGACSTH 523
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 303 bits (777), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 174/582 (29%), Positives = 306/582 (52%), Gaps = 12/582 (2%)
Query: 50 GRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMP 109
G G LG IH ++K S + V +SL+ MY+K ++++++FD MP
Sbjct: 118 GALGREFLGRMIHTLVVK--------SGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMP 169
Query: 110 VRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSV 169
RD SWN++IS F ++ + + F +M S + +LT +SAC +
Sbjct: 170 ERDVASWNTVISCFYQSGEAEKALELFGRMESSGF---EPNSVSLTVAISACSRLLWLER 226
Query: 170 SRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQ 229
+ IH GFE + V +AL+ Y KC C R+VF +M +++V W ++I G
Sbjct: 227 GKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVA 286
Query: 230 NELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCI 289
+ + + +M P+ T S LMACS + L G+ IHG + + + +D+ +
Sbjct: 287 KGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYV 346
Query: 290 ESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGI 349
+L+DLY KCG A +F ++ S V++ ++ G +A++++ ++V++G+
Sbjct: 347 NCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGV 406
Query: 350 EVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQ 409
+ D ++VL +L GKQIH I + + + + L++MYSKCG ++ +
Sbjct: 407 KPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFR 466
Query: 410 VFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGL 469
+F + +K+ +SW +I+A+ HG AL ++EM+ G+ P VT L++L AC HAGL
Sbjct: 467 IFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGL 526
Query: 470 VEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENR-GVLVWQAL 528
+++G++F M + + P EHY+C++D+LGRAG L EA I+ PE + L
Sbjct: 527 IDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTL 586
Query: 529 LGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVA 588
AC +H + +G A L+ P ++ ++++ N+Y++ W +MKE G+
Sbjct: 587 FSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLR 646
Query: 589 KEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLK 630
K+ G SWIE+ +V F D+ H +A+ ++ L+ L H++
Sbjct: 647 KKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECLALLSGHME 688
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 145/494 (29%), Positives = 245/494 (49%), Gaps = 19/494 (3%)
Query: 79 RNALFVWNSLLSMYSKCGELQDAIKLFDRMPVR-DTVSWNSMISGFLRNRDFDAGFRFFK 137
R + + SL+++Y C + A +F+ +R D WNS++SG+ +N F FK
Sbjct: 36 RRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFK 95
Query: 138 QMSESRTVYSRFDKATLTTMLSACD--GPEFSSVSRMIHGLVFVGGFEREITVGNALITS 195
++ D T ++ A G EF + RMIH LV G+ ++ V ++L+
Sbjct: 96 RLLNCSICVP--DSFTFPNVIKAYGALGREF--LGRMIHTLVVKSGYVCDVVVASSLVGM 151
Query: 196 YFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTY 255
Y K F QVFDEM ER+V +W VIS Q+ E L LF +M PN+++
Sbjct: 152 YAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSL 211
Query: 256 LSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEE 315
++ ACS + L G++IH K G + D + SAL+D+Y KC LE A ++F+
Sbjct: 212 TVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPR 271
Query: 316 LDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQI 375
V+ ++ + G + ++I R++ G ++++L +L GK I
Sbjct: 272 KSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFI 331
Query: 376 HSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDG 435
H +I+ + + +V+ LI++Y KCGE + + VF + + + SWN +I+++ G+
Sbjct: 332 HGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNW 391
Query: 436 SRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYAC 495
+A++ Y++M G+ P VTF S+L ACS +EKG + +S++ + RL +
Sbjct: 392 FKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSIS-ESRLETDELLLSA 450
Query: 496 VVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGD--------SEMGKFA--A 545
++DM + G KEA +P+ + V+ W ++ A HG EM KF
Sbjct: 451 LLDMYSKCGNEKEAFRIFNSIPK-KDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKP 509
Query: 546 DQLILAAPASSAPH 559
D + L A S+ H
Sbjct: 510 DGVTLLAVLSACGH 523
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 160/299 (53%), Gaps = 2/299 (0%)
Query: 171 RMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEM-IERNVVTWTAVISGLAQ 229
+++H + G R++ + +LI YF C C R VF+ I +V W +++SG ++
Sbjct: 24 KLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSK 83
Query: 230 NELYEDGLRLFAQMRGGSVS-PNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLC 288
N ++ D L +F ++ S+ P++ T+ + + A + GR IH L+ K G D+
Sbjct: 84 NSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVV 143
Query: 289 IESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLG 348
+ S+L+ +Y+K E + Q+F+ E D S ++ F Q+G E+A+++F R+ + G
Sbjct: 144 VASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSG 203
Query: 349 IEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSL 408
E ++ ++ + L GK+IH +KK F + +V++ L++MY KC L +
Sbjct: 204 FEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAR 263
Query: 409 QVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHA 467
+VF +M +K+ ++WNS+I + GD ++ M + G P+ T S+L ACS +
Sbjct: 264 EVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRS 322
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 198/403 (49%), Gaps = 16/403 (3%)
Query: 38 NHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGE 97
N L+ +S C R L G IH + +K+ F D +V ++L+ MY KC
Sbjct: 207 NSVSLTVAISACSRLLWLERGKEIHRKCVKKG--FELDE------YVNSALVDMYGKCDC 258
Query: 98 LQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTM 157
L+ A ++F +MP + V+WNSMI G++ D + +M T R + TLT++
Sbjct: 259 LEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGT---RPSQTTLTSI 315
Query: 158 LSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNV 217
L AC + IHG V +I V +LI YFKCG VF + +
Sbjct: 316 LMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVA 375
Query: 218 VTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGL 277
+W +IS + + ++ QM V P+ +T+ S L ACS + AL +G++IH
Sbjct: 376 ESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLS 435
Query: 278 LWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEA 337
+ + +++D + SAL+D+YSKCG+ + A++IF S + D VS TV++ A+ +G EA
Sbjct: 436 ISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREA 495
Query: 338 IQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSN--GLI 395
+ F + G++ D + AVL G + G + S ++ + P + + +I
Sbjct: 496 LYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQ-MRSKYGIEPIIEHYSCMI 554
Query: 396 NMYSKCGELHDSLQVFYEM--TQKNSISWNSVIAAFARHGDGS 436
++ + G L ++ ++ + T N+ +++ +A H + S
Sbjct: 555 DILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHS 597
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 148/293 (50%), Gaps = 17/293 (5%)
Query: 256 LSSLMACSG-VQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAE 314
LS L C+ ++L + +H + LG++ D+ + +L+++Y C A +FE+ +
Sbjct: 7 LSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFD 66
Query: 315 ELDGVSL-TVILVAFAQNGFEEEAIQIFTRIVTLGIEV-DANMVSAVLGVFGVGTSLPLG 372
V + ++ +++N + +++F R++ I V D+ V+ +G LG
Sbjct: 67 IRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLG 126
Query: 373 KQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARH 432
+ IH+L++K + + V++ L+ MY+K +SLQVF EM +++ SWN+VI+ F +
Sbjct: 127 RMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQS 186
Query: 433 GDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRS-- 490
G+ +AL+ + M G P V+ + ACS +E+G E HR +
Sbjct: 187 GEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEI-------HRKCVKKGF 239
Query: 491 --EHY--ACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSE 539
+ Y + +VDM G+ L+ A+ + +P + ++ W +++ GDS+
Sbjct: 240 ELDEYVNSALVDMYGKCDCLEVAREVFQKMPR-KSLVAWNSMIKGYVAKGDSK 291
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 154/350 (44%), Gaps = 15/350 (4%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNA-LFVWNSLLSMYSKCGELQD 100
L+S+L C R NL G IH +I+ S NA ++V SL+ +Y KCGE
Sbjct: 312 LTSILMACSRSRNLLHGKFIHGYVIR---------SVVNADIYVNCSLIDLYFKCGEANL 362
Query: 101 AIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSA 160
A +F + SWN MIS ++ ++ + QM +V + D T T++L A
Sbjct: 363 AETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMV---SVGVKPDVVTFTSVLPA 419
Query: 161 CDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTW 220
C + IH + E + + +AL+ Y KCG + ++F+ + +++VV+W
Sbjct: 420 CSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSW 479
Query: 221 TAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLW- 279
T +IS + + L F +M+ + P+ +T L+ L AC + EG K +
Sbjct: 480 TVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRS 539
Query: 280 KLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEEL-DGVSLTVILVAFAQNGFEEEAI 338
K G++ + S ++D+ + G L A++I + E D L L + E
Sbjct: 540 KYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLG 599
Query: 339 QIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNP 388
R++ DA+ + ++ G S +++ + + + P
Sbjct: 600 DRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKP 649
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 303 bits (776), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 204/674 (30%), Positives = 340/674 (50%), Gaps = 60/674 (8%)
Query: 22 APISQYPF---PATSE----SVLNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSF 74
P S YPF P++S+ S+ NH LS LL C +L + IHA++IK
Sbjct: 10 VPSSSYPFHFLPSSSDPPYDSIRNHPSLS-LLHNCKTLQSLRI---IHAQMIK------- 58
Query: 75 DSSRRNALFVWNSLLS---MYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDA 131
N + + L+ + L AI +F + + + WN+M G + D +
Sbjct: 59 -IGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVS 117
Query: 132 GFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFE-------- 183
+ + M + + + T +L +C + + IHG V G +
Sbjct: 118 ALKLYVCMISLGLLPNSY---TFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTS 174
Query: 184 -----------------------REITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTW 220
R++ ALI Y G +++FDE+ ++VV+W
Sbjct: 175 LISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSW 234
Query: 221 TAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWK 280
A+ISG A+ Y++ L LF M +V P+ T ++ + AC+ ++ GR++H +
Sbjct: 235 NAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDD 294
Query: 281 LGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQI 340
G S+L I +AL+DLYSKCG LE A +FE D +S ++ + +EA+ +
Sbjct: 295 HGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLL 354
Query: 341 FTRIVTLG-IEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIK--KNFSQNPFVSNGLINM 397
F ++ G D M+S + +G ++ +G+ IH I K K + + LI+M
Sbjct: 355 FQEMLRSGETPNDVTMLSILPACAHLG-AIDIGRWIHVYIDKRLKGVTNASSLRTSLIDM 413
Query: 398 YSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTF 457
Y+KCG++ + QVF + K+ SWN++I FA HG + + MR GI P D+TF
Sbjct: 414 YAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITF 473
Query: 458 LSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLP 517
+ LL ACSH+G+++ G +MT+D++++P+ EHY C++D+LG +GL KEA+ I +
Sbjct: 474 VGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMME 533
Query: 518 ENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAG 577
++W +LL AC +HG+ E+G+ A+ LI P + +VL++NIY++ G+W E A
Sbjct: 534 MEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAK 593
Query: 578 AIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDEGYVPD 637
+ +KG+ K G S IEID V F++GDK HP+ I+ L + L+ G+VPD
Sbjct: 594 TRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPD 653
Query: 638 KRCILYYLDQDKKD 651
+L ++++ K+
Sbjct: 654 TSEVLQEMEEEWKE 667
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 303 bits (775), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 197/609 (32%), Positives = 320/609 (52%), Gaps = 30/609 (4%)
Query: 43 SSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAI 102
++L C NL G ++H ++ P +S +N + N L++MY+KCG + A
Sbjct: 63 AALFQACAEQRNLLDGINLHHHMLSHPYCYS-----QNVILA-NFLINMYAKCGNILYAR 116
Query: 103 KLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACD 162
++FD MP R+ VSW ++I+G+++ + GF F M S + F TL+++L++C
Sbjct: 117 QVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSML-SHCFPNEF---TLSSVLTSCR 172
Query: 163 GPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKC---GCFCQGRQVFDEMIERNVVT 219
+ +HGL G I V NA+I+ Y +C + VF+ + +N+VT
Sbjct: 173 YEP----GKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVT 228
Query: 220 WTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYL---SSLMACSGVQALAEGR---K 273
W ++I+ L + + +F +M V + T L SSL S + + +
Sbjct: 229 WNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQ 288
Query: 274 IHGLLWKLGMQSDLCIESALMDLYSK-CGSLEGAWQIF-ESAEELDGVSLTVILVAFAQN 331
+H L K G+ + + +AL+ +YS+ +++F E + D V+ I+ AFA
Sbjct: 289 LHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVY 348
Query: 332 GFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVS 391
E AI +F ++ + D S+VL + IH+ +IK F + ++
Sbjct: 349 D-PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLN 407
Query: 392 NGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIA 451
N LI+ Y+KCG L ++VF +M ++ +SWNS++ A++ HG L +++M I
Sbjct: 408 NSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DIN 464
Query: 452 PTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKN 511
P TF++LL ACSHAG VE+G+ SM P+ HYACV+DML RA EA+
Sbjct: 465 PDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEE 524
Query: 512 FIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLI-LAAPASSAPHVLMANIYSAEG 570
I+ +P + +VW ALLG+C HG++ +GK AAD+L L P +S ++ M+NIY+AEG
Sbjct: 525 VIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEG 584
Query: 571 KWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLK 630
+ E +IK M+ V KE +SW EI +V F G + P + ++ EL RL+ LK
Sbjct: 585 SFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYRELKRLISWLK 644
Query: 631 DEGYVPDKR 639
+ GYVP+ R
Sbjct: 645 EMGYVPEMR 653
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 302 bits (774), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 165/483 (34%), Positives = 263/483 (54%), Gaps = 2/483 (0%)
Query: 171 RMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQN 230
+ IH +V GF + ++ L+ + G C RQVFDEM + + W + G +N
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 231 ELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIE 290
+L + L L+ +MR V P+ TY + A S + + G +H + K G +
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVA 147
Query: 291 SALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIE 350
+ L+ +Y K G L A +FES + D V+ L Q G A++ F ++ ++
Sbjct: 148 TELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQ 207
Query: 351 VDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQV 410
D+ V ++L G SL +G++I+ K+ N V N ++M+ KCG + +
Sbjct: 208 FDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVL 267
Query: 411 FYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLV 470
F EM Q+N +SW+++I +A +GD AL + M+ G+ P VTFL +L ACSHAGLV
Sbjct: 268 FEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLV 327
Query: 471 EKGMEF--LVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQAL 528
+G + L+ + D L PR EHYAC+VD+LGR+GLL+EA FI+ +P +W AL
Sbjct: 328 NEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGAL 387
Query: 529 LGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVA 588
LGAC++H D +G+ AD L+ AP + HVL++NIY+A GKW +M++ G
Sbjct: 388 LGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTK 447
Query: 589 KEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDEGYVPDKRCILYYLDQD 648
K S +E + ++ F GDK HPQ+ I+ +L +LK ++ GYVPD + + ++ +
Sbjct: 448 KVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVEME 507
Query: 649 KKD 651
+K+
Sbjct: 508 EKE 510
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 128/265 (48%), Gaps = 20/265 (7%)
Query: 53 GNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRD 112
G+ G ++HA ++K + F V L+ MY K GEL A LF+ M V+D
Sbjct: 123 GDFSCGFALHAHVVK----YGFGCLG----IVATELVMMYMKFGELSSAEFLFESMQVKD 174
Query: 113 TVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRM 172
V+WN+ ++ ++ + +F +M +FD T+ +MLSAC +
Sbjct: 175 LVAWNAFLAVCVQTGNSAIALEYFNKMCADAV---QFDSFTVVSMLSACGQLGSLEIGEE 231
Query: 173 IHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNEL 232
I+ + I V NA + + KCG R +F+EM +RNVV+W+ +I G A N
Sbjct: 232 IYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGD 291
Query: 233 YEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIE-- 290
+ L LF M+ + PN +T+L L ACS + EG++ L+ + +D +E
Sbjct: 292 SREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQ---SNDKNLEPR 348
Query: 291 ----SALMDLYSKCGSLEGAWQIFE 311
+ ++DL + G LE A++ +
Sbjct: 349 KEHYACMVDLLGRSGLLEEAYEFIK 373
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 165/362 (45%), Gaps = 9/362 (2%)
Query: 77 SRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFF 136
S +N+L LL G++ A ++FD M WN++ G++RN+ +
Sbjct: 40 SEKNSLL--TQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLY 97
Query: 137 KQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSY 196
K+M R + R D+ T ++ A S +H V GF V L+ Y
Sbjct: 98 KKM---RDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMY 154
Query: 197 FKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYL 256
K G +F+ M +++V W A ++ Q L F +M +V ++ T +
Sbjct: 155 MKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVV 214
Query: 257 SSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEEL 316
S L AC + +L G +I+ K + ++ +E+A +D++ KCG+ E A +FE ++
Sbjct: 215 SMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQR 274
Query: 317 DGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIH 376
+ VS + ++V +A NG EA+ +FT + G+ + VL + GK+
Sbjct: 275 NVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYF 334
Query: 377 SLIIK---KNFSQNPFVSNGLINMYSKCGELHDSLQVFYEM-TQKNSISWNSVIAAFARH 432
SL+++ KN ++++ + G L ++ + +M + ++ W +++ A A H
Sbjct: 335 SLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVH 394
Query: 433 GD 434
D
Sbjct: 395 RD 396
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 58/118 (49%), Gaps = 11/118 (9%)
Query: 44 SLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIK 103
S+LS CG+ G+L +G I+ R K+ D + + V N+ L M+ KCG + A
Sbjct: 215 SMLSACGQLGSLEIGEEIYDRARKE----EIDCN----IIVENARLDMHLKCGNTEAARV 266
Query: 104 LFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSAC 161
LF+ M R+ VSW++MI G+ N D F M R + T +LSAC
Sbjct: 267 LFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGL---RPNYVTFLGVLSAC 321
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 301 bits (772), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 186/598 (31%), Positives = 315/598 (52%), Gaps = 29/598 (4%)
Query: 74 FDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGF 133
FDS + A+ WNS++S Y G ++A +LFD M R+ VSWN ++SG+++NR
Sbjct: 40 FDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEAR 99
Query: 134 RFFKQMSESRTV-YSRFDKATLTT-MLSACDG-----PEFSSVS--RMIHGLVFVGGFER 184
F+ M E V ++ K + M+ + PE + VS M GL+ G ++
Sbjct: 100 NVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDK 159
Query: 185 -----------EITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELY 233
++ +I + G + R +FDEM ERNVVTWT +I+G QN
Sbjct: 160 ARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRV 219
Query: 234 EDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESAL 293
+ +LF M +++ S L+ + + + + ++ M+ + +A+
Sbjct: 220 DVARKLFEVM----PEKTEVSWTSMLLGYTLSGRIEDAEEFFEVM---PMKPVIAC-NAM 271
Query: 294 MDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDA 353
+ + + G + A ++F+ E+ D + ++ A+ + GFE EA+ +F ++ G+
Sbjct: 272 IVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSF 331
Query: 354 NMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYE 413
+ ++L V SL G+Q+H+ +++ F + +V++ L+ MY KCGEL + VF
Sbjct: 332 PSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDR 391
Query: 414 MTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKG 473
+ K+ I WNS+I+ +A HG G AL+ + EM G P VT +++L ACS+AG +E+G
Sbjct: 392 FSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEG 451
Query: 474 MEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACS 533
+E SM ++P EHY+C VDMLGRAG + +A IE + VW ALLGAC
Sbjct: 452 LEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACK 511
Query: 534 IHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGV 593
H ++ + AA +L P ++ +VL+++I ++ KW + A K M+ V+K G
Sbjct: 512 THSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGC 571
Query: 594 SWIEIDKQVSSFVVGD-KLHPQADIIFLELSRLLKHLKDEGYVPDKRCILYYLDQDKK 650
SWIE+ K+V F G K HP+ +I + L + L++ GY PD +L+ +D+++K
Sbjct: 572 SWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEK 629
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 67/120 (55%), Gaps = 11/120 (9%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDA 101
L S+LSVC +L G +HA +++ FD + ++V + L++MY KCGEL A
Sbjct: 334 LISILSVCATLASLQYGRQVHAHLVR----CQFD----DDVYVASVLMTMYVKCGELVKA 385
Query: 102 IKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSAC 161
+FDR +D + WNS+ISG+ + + + F +M S T+ +K TL +L+AC
Sbjct: 386 KLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMP---NKVTLIAILTAC 442
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 77/402 (19%), Positives = 168/402 (41%), Gaps = 66/402 (16%)
Query: 193 ITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQM-RGGSVSPN 251
I+ + G + R+ FD + + + +W +++SG N L ++ +LF +M VS N
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWN 83
Query: 252 TLT--YLSSLMACSGVQ--------------ALAEGRKIHG-------LLWKL------- 281
L Y+ + M A+ +G G L W++
Sbjct: 84 GLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVS 143
Query: 282 ------GMQSDLCIESA--LMDLYS---------------KCGSLEGAWQIFESAEELDG 318
G+ D I+ A L D+ + G ++ A IF+ E +
Sbjct: 144 WTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNV 203
Query: 319 VSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSL 378
V+ T ++ + QN + A ++F + + + + S +LG + + + ++ +
Sbjct: 204 VTWTTMITGYRQNNRVDVARKLFE---VMPEKTEVSWTSMLLG-YTLSGRIEDAEEFFEV 259
Query: 379 IIKKNFSQNPFVS-NGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSR 437
+ K P ++ N +I + + GE+ + +VF M +++ +W +I A+ R G
Sbjct: 260 MPMK-----PVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELE 314
Query: 438 ALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVV 497
AL + +M+ G+ P+ + +S+L C+ ++ G + + R + + ++
Sbjct: 315 ALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVR-CQFDDDVYVASVLM 373
Query: 498 DMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSE 539
M + G L +AK + ++ +++W +++ + HG E
Sbjct: 374 TMYVKCGELVKAKLVFDRF-SSKDIIMWNSIISGYASHGLGE 414
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 300 bits (769), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 178/508 (35%), Positives = 266/508 (52%), Gaps = 17/508 (3%)
Query: 88 LLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYS 147
L+ +Y K G+++ A KLFDR+ RD VSW +MIS F R FK+M +
Sbjct: 53 LIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKAN 112
Query: 148 RFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQ 207
+F T ++L +C IHG V G + V +AL++ Y +CG + R
Sbjct: 113 QF---TYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARL 169
Query: 208 VFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQA 267
FD M ER++V+W A+I G N + LF M P+ T+ S L A V+
Sbjct: 170 QFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKC 229
Query: 268 LAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVA 327
L ++HGL KLG + +L++ Y KCGSL AW++ E ++ D +S T ++
Sbjct: 230 LEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITG 289
Query: 328 FAQ-NGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQ 386
F+Q N +A IF ++ + ++D +VS++L + S+ +G+QIH +K SQ
Sbjct: 290 FSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKS--SQ 347
Query: 387 NPF---VSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYE 443
F + N LI+MY+K GE+ D++ F EM +K+ SW S+IA + RHG+ +A+ Y
Sbjct: 348 IRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYN 407
Query: 444 EMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRA 503
M I P DVTFLSLL ACSH G E G + +M H + R EH +C++DML R+
Sbjct: 408 RMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARS 467
Query: 504 GLLKEAKNFIEGLPENRGVL-----VWQALLGACSIHGDSEMGKFAADQLILAAPASSAP 558
G L+EA I G++ W A L AC HG+ ++ K AA QL+ P
Sbjct: 468 GYLEEAYALIRS---KEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVN 524
Query: 559 HVLMANIYSAEGKWKERAGAIKRMKEKG 586
++ +A++Y+A G W K MKE G
Sbjct: 525 YINLASVYAANGAWDNALNTRKLMKESG 552
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 180/369 (48%), Gaps = 2/369 (0%)
Query: 172 MIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNE 231
+IHG GF + + + LI Y K G R++FD + +R+VV+WTA+IS ++
Sbjct: 33 LIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCG 92
Query: 232 LYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIES 291
+ D L LF +M V N TY S L +C + L EG +IHG + K +L + S
Sbjct: 93 YHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRS 152
Query: 292 ALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEV 351
AL+ LY++CG +E A F+S +E D VS ++ + N + + +F ++T G +
Sbjct: 153 ALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKP 212
Query: 352 DANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVF 411
D ++L V L + ++H L IK F ++ + L+N Y KCG L ++ ++
Sbjct: 213 DCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLH 272
Query: 412 YEMTQKNSISWNSVIAAFARHGD-GSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLV 470
+++ +S ++I F++ + S A +++M +V S+L C+ V
Sbjct: 273 EGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASV 332
Query: 471 EKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLG 530
G + + ++ ++DM ++G +++A E + E + V W +L+
Sbjct: 333 TIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKE-KDVRSWTSLIA 391
Query: 531 ACSIHGDSE 539
HG+ E
Sbjct: 392 GYGRHGNFE 400
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 193/403 (47%), Gaps = 17/403 (4%)
Query: 38 NHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGE 97
N S+L C G L G IH + K + L V ++LLS+Y++CG+
Sbjct: 112 NQFTYGSVLKSCKDLGCLKEGMQIHGSVEK--------GNCAGNLIVRSALLSLYARCGK 163
Query: 98 LQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTM 157
+++A FD M RD VSWN+MI G+ N D F F+ M T + D T ++
Sbjct: 164 MEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLM---LTEGKKPDCFTFGSL 220
Query: 158 LSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNV 217
L A + + +HGL GF R + +L+ +Y KCG ++ + +R++
Sbjct: 221 LRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDL 280
Query: 218 VTWTAVISGLA-QNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHG 276
++ TA+I+G + QN D +F M + + S L C+ + ++ GR+IHG
Sbjct: 281 LSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHG 340
Query: 277 LLWKLG-MQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEE 335
K ++ D+ + ++L+D+Y+K G +E A FE +E D S T ++ + ++G E
Sbjct: 341 FALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFE 400
Query: 336 EAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKN-FSQNPFVSNGL 394
+AI ++ R+ I+ + ++L LG +I+ +I K+ + +
Sbjct: 401 KAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCI 460
Query: 395 INMYSKCGELHDSLQVFYE---MTQKNSISWNSVIAAFARHGD 434
I+M ++ G L ++ + + +S +W + + A RHG+
Sbjct: 461 IDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGN 503
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 109/220 (49%), Gaps = 4/220 (1%)
Query: 248 VSPNTLT----YLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSL 303
VS N L YL +L CS + IHG G S+L ++ L+DLY K G +
Sbjct: 4 VSENYLLSPSLYLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDV 63
Query: 304 EGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVF 363
+ A ++F+ + D VS T ++ F++ G+ +A+ +F + ++ + +VL
Sbjct: 64 KHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSC 123
Query: 364 GVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWN 423
L G QIH + K N + N V + L+++Y++CG++ ++ F M +++ +SWN
Sbjct: 124 KDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWN 183
Query: 424 SVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHA 463
++I + + + ++ M G P TF SLL A
Sbjct: 184 AMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRA 223
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 300 bits (768), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 168/548 (30%), Positives = 288/548 (52%), Gaps = 3/548 (0%)
Query: 104 LFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDG 163
LF + +NS+I+GF+ N F F + + F T +L AC
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGF---TFPLVLKACTR 123
Query: 164 PEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAV 223
+ +H LV GF ++ +L++ Y G ++FDE+ +R+VVTWTA+
Sbjct: 124 ASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTAL 183
Query: 224 ISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGM 283
SG + + + + LF +M V P++ + L AC V L G I + ++ M
Sbjct: 184 FSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEM 243
Query: 284 QSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTR 343
Q + + + L++LY+KCG +E A +F+S E D V+ + ++ +A N F +E I++F +
Sbjct: 244 QKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQ 303
Query: 344 IVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGE 403
++ ++ D + L +L LG+ SLI + F N F++N LI+MY+KCG
Sbjct: 304 MLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGA 363
Query: 404 LHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHA 463
+ +VF EM +K+ + N+ I+ A++G + + + GI+P TFL LL
Sbjct: 364 MARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCG 423
Query: 464 CSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVL 523
C HAGL++ G+ F +++ + L EHY C+VD+ GRAG+L +A I +P +
Sbjct: 424 CVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAI 483
Query: 524 VWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMK 583
VW ALL C + D+++ + +LI P ++ +V ++NIYS G+W E A M
Sbjct: 484 VWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMN 543
Query: 584 EKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDEGYVPDKRCILY 643
+KG+ K G SWIE++ +V F+ DK HP +D I+ +L L ++ G+VP + +
Sbjct: 544 KKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFF 603
Query: 644 YLDQDKKD 651
+++++K+
Sbjct: 604 DVEEEEKE 611
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 187/386 (48%), Gaps = 13/386 (3%)
Query: 45 LLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKL 104
+L C R + LG +H+ ++K F+ D + SLLS+YS G L DA KL
Sbjct: 117 VLKACTRASSRKLGIDLHSLVVKCG--FNHDVA------AMTSLLSIYSGSGRLNDAHKL 168
Query: 105 FDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGP 164
FD +P R V+W ++ SG+ + FK+M E + D + +LSAC
Sbjct: 169 FDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGV---KPDSYFIVQVLSACVHV 225
Query: 165 EFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVI 224
I + ++ V L+ Y KCG + R VFD M+E+++VTW+ +I
Sbjct: 226 GDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMI 285
Query: 225 SGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQ 284
G A N ++G+ LF QM ++ P+ + + L +C+ + AL G L+ +
Sbjct: 286 QGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFL 345
Query: 285 SDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRI 344
++L + +AL+D+Y+KCG++ +++F+ +E D V + + A+NG + + +F +
Sbjct: 346 TNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQT 405
Query: 345 VTLGIEVDANMVSAVL-GVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGE 403
LGI D + +L G G + +++ + +++++ + G
Sbjct: 406 EKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGM 465
Query: 404 LHDSLQVFYEMTQK-NSISWNSVIAA 428
L D+ ++ +M + N+I W ++++
Sbjct: 466 LDDAYRLICDMPMRPNAIVWGALLSG 491
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 300 bits (768), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 175/577 (30%), Positives = 289/577 (50%), Gaps = 69/577 (11%)
Query: 83 FVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSES 142
+ WN ++S ++K GEL A +LF+ MP +D V+ NS++ G++ N + R FK+++ S
Sbjct: 125 YSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFS 184
Query: 143 RTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCF 202
D TLTT+L AC E + IH + +GG E + + ++L+ Y KCG
Sbjct: 185 A------DAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDL 238
Query: 203 ---------------------------C----QGRQVFDEMIERNVVTWTAVISGLAQNE 231
C + R +FD R V+ W ++ISG N
Sbjct: 239 RMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANN 298
Query: 232 LYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIES 291
+ + L LF +MR ++ T + + AC G+ L G+++H K G+ D+ + S
Sbjct: 299 MKMEALVLFNEMRN-ETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVAS 357
Query: 292 ALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILV------------------------- 326
L+D+YSKCGS A ++F E D + L ++
Sbjct: 358 TLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLIS 417
Query: 327 ------AFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLII 380
F+QNG E ++ F ++ L + D +S+V+ +SL LG+Q+ +
Sbjct: 418 WNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARAT 477
Query: 381 KKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQ 440
+ VS+ LI++Y KCG + +VF M + + + WNS+I+ +A +G G A+
Sbjct: 478 IVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAID 537
Query: 441 FYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDML 500
+++M V GI PT +TF+ +L AC++ GLVE+G + SM DH P EH++C+VD+L
Sbjct: 538 LFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLL 597
Query: 501 GRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHV 560
RAG ++EA N +E +P + +W ++L C +G MGK AA+++I P +S +V
Sbjct: 598 ARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYV 657
Query: 561 LMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIE 597
++ I++ G W+ A K M+E V K G SW +
Sbjct: 658 QLSAIFATSGDWESSALVRKLMRENNVTKNPGSSWTD 694
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 61/125 (48%), Gaps = 11/125 (8%)
Query: 38 NHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGE 97
+ LSS++S C +L LG + AR DS + V +SL+ +Y KCG
Sbjct: 449 DEVSLSSVISACASISSLELGEQVFAR----ATIVGLDSDQ----VVSSSLIDLYCKCGF 500
Query: 98 LQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTM 157
++ ++FD M D V WNSMISG+ N FK+MS + R + T +
Sbjct: 501 VEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGI---RPTQITFMVV 557
Query: 158 LSACD 162
L+AC+
Sbjct: 558 LTACN 562
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 118/315 (37%), Gaps = 98/315 (31%)
Query: 255 YLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCI-ESALMDLYSKCGSL---------- 303
Y+ L +CS R+ +GLL K G S + I + L+ +YS+ G +
Sbjct: 29 YVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEM 88
Query: 304 ------------EG---------AWQIFESAEELDGVSLTVILVAFAQ------------ 330
EG + + F+ E DG S V++ FA+
Sbjct: 89 PDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFN 148
Query: 331 -------------------NGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPL 371
NG+ EEA+++F L DA ++ VL +L
Sbjct: 149 AMPEKDVVTLNSLLHGYILNGYAEEALRLFKE---LNFSADAITLTTVLKACAELEALKC 205
Query: 372 GKQIHSLIIKKNFSQNPFVSNGLINMYSKCGEL--------------------------- 404
GKQIH+ I+ + +++ L+N+Y+KCG+L
Sbjct: 206 GKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYAN 265
Query: 405 ----HDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSL 460
++S +F + + I WNS+I+ + + AL + EMR T ++
Sbjct: 266 CGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMR-NETREDSRTLAAV 324
Query: 461 LHACSHAGLVEKGME 475
++AC G +E G +
Sbjct: 325 INACIGLGFLETGKQ 339
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 300 bits (767), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 175/568 (30%), Positives = 294/568 (51%), Gaps = 25/568 (4%)
Query: 55 LHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTV 114
LHL IH ++ P F++ R LF+ L + + + A +L ++
Sbjct: 15 LHL-KQIHCLLLTSPIFYT-----RRDLFLSRLLRRCCTAATQFRYARRLLCQLQTLSIQ 68
Query: 115 SWNSMIS----GFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSAC----DGPEF 166
W+S+I G NR F ++ M + + SR T +L A D F
Sbjct: 69 LWDSLIGHFSGGITLNRRL--SFLAYRHMRRNGVIPSRH---TFPPLLKAVFKLRDSNPF 123
Query: 167 SSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISG 226
H + G + + V N+LI+ Y G F ++FD +++VVTWTA+I G
Sbjct: 124 Q-----FHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDG 178
Query: 227 LAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLG-MQS 285
+N + + F +M+ V+ N +T +S L A V+ + GR +HGL + G ++
Sbjct: 179 FVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKC 238
Query: 286 DLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIV 345
D+ I S+L+D+Y KC + A ++F+ + V+ T ++ + Q+ ++ + +F ++
Sbjct: 239 DVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEML 298
Query: 346 TLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELH 405
+ + +S+VL +L G+++H +IK + N LI++Y KCG L
Sbjct: 299 KSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLE 358
Query: 406 DSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACS 465
+++ VF + +KN +W ++I FA HG A + M ++P +VTF+++L AC+
Sbjct: 359 EAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACA 418
Query: 466 HAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVW 525
H GLVE+G +SM + P+++HYAC+VD+ GR GLL+EAK IE +P +VW
Sbjct: 419 HGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVW 478
Query: 526 QALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEK 585
AL G+C +H D E+GK+AA ++I P+ S + L+AN+YS W E A K+MK++
Sbjct: 479 GALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQ 538
Query: 586 GVAKEVGVSWIEIDKQVSSFVVGDKLHP 613
V K G SWIE+ ++ F+ D P
Sbjct: 539 QVVKSPGFSWIEVKGKLCEFIAFDDKKP 566
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 15/207 (7%)
Query: 33 SESVLNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMY 92
S+ N LSS+LS C G LH G +H +IK + + +L+ +Y
Sbjct: 300 SDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAG--------TTLIDLY 351
Query: 93 SKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKA 152
KCG L++AI +F+R+ ++ +W +MI+GF + F F M S + ++
Sbjct: 352 VKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSS---HVSPNEV 408
Query: 153 TLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGN--ALITSYFKCGCFCQGRQVFD 210
T +LSAC R + L G F E + ++ + + G + + + +
Sbjct: 409 TFMAVLSACAHGGLVEEGRRLF-LSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIE 467
Query: 211 EM-IERNVVTWTAVISGLAQNELYEDG 236
M +E V W A+ ++ YE G
Sbjct: 468 RMPMEPTNVVWGALFGSCLLHKDYELG 494
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 298 bits (764), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 182/564 (32%), Positives = 306/564 (54%), Gaps = 26/564 (4%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDA 101
+++LS+C G+L G +H+ +IK F A V N+L++MY C + DA
Sbjct: 193 FATILSMCDY-GSLDFGKQVHSLVIKAGFFI--------ASSVVNALITMYFNCQVVVDA 243
Query: 102 IKLFDR--MPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLS 159
+F+ + VRD V++N +I G L D F++M E+ R T +++
Sbjct: 244 CLVFEETDVAVRDQVTFNVVIDG-LAGFKRDESLLVFRKMLEASL---RPTDLTFVSVMG 299
Query: 160 ACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVT 219
+C +++ +HGL G+E+ V NA +T Y F +VF+ + E+++VT
Sbjct: 300 SCSC---AAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVT 356
Query: 220 WTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLW 279
W +IS Q +L + + ++ +M V P+ T+ S L + L + +
Sbjct: 357 WNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVL---EMVQACII 413
Query: 280 KLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQ 339
K G+ S + I +AL+ YSK G +E A +FE + + +S I+ F NGF E ++
Sbjct: 414 KFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLE 473
Query: 340 IFTRIVTLGIEV--DANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINM 397
F+ ++ + + DA +S +L + +SL LG Q H+ +++ + + N LINM
Sbjct: 474 RFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINM 533
Query: 398 YSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMR-VGGIAPTDVT 456
YS+CG + +SL+VF +M++K+ +SWNS+I+A++RHG+G A+ Y+ M+ G + P T
Sbjct: 534 YSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAAT 593
Query: 457 FLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGL 516
F ++L ACSHAGLVE+G+E SM H + +H++C+VD+LGRAG L EA++ ++
Sbjct: 594 FSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKIS 653
Query: 517 PENRG--VLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKE 574
+ G V VW AL AC+ HGD ++GK A L+ + +V ++NIY+ G WKE
Sbjct: 654 EKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKE 713
Query: 575 RAGAIKRMKEKGVAKEVGVSWIEI 598
+ + G K+ G SW+ +
Sbjct: 714 AEETRRAINMIGAMKQRGCSWMRL 737
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 160/551 (29%), Positives = 263/551 (47%), Gaps = 52/551 (9%)
Query: 31 ATSESVLNHAHLS-SLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLL 89
A +L H+H+S +LLS+ R GNL A + K+ FD ++ W +LL
Sbjct: 83 AIRSGLLCHSHVSNTLLSLYERLGNL-------ASLKKK-----FDEIDEPDVYSWTTLL 130
Query: 90 SMYSKCGELQDAIKLFDRMPVRDTVS-WNSMISGFLRNRDFDAGFRFFKQMSESRTVYSR 148
S K G+++ A ++FD+MP RD V+ WN+MI+G + + F++M + + R
Sbjct: 131 SASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHK---LGVR 187
Query: 149 FDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQV 208
DK T+LS CD + +H LV GF +V NALIT YF C V
Sbjct: 188 HDKFGFATILSMCDYGSL-DFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLV 246
Query: 209 FDE--MIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQ 266
F+E + R+ VT+ VI GLA + ++ L +F +M S+ P LT++S + +CS
Sbjct: 247 FEETDVAVRDQVTFNVVIDGLAGFK-RDESLLVFRKMLEASLRPTDLTFVSVMGSCS--- 302
Query: 267 ALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILV 326
A G ++HGL K G + + +A M +YS A ++FES EE D V+ ++
Sbjct: 303 CAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMIS 362
Query: 327 AFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLG--KQIHSLIIKKNF 384
++ Q + A+ ++ R+ +G++ D ++L TSL L + + + IIK
Sbjct: 363 SYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLL-----ATSLDLDVLEMVQACIIKFGL 417
Query: 385 SQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFY-- 442
S +SN LI+ YSK G++ + +F +KN ISWN++I+ F +G L+ +
Sbjct: 418 SSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSC 477
Query: 443 ---EEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDM 499
E+R I P T +LL C + G + + R + A +++M
Sbjct: 478 LLESEVR---ILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNA-LINM 533
Query: 500 LGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEM-----------GKFAADQL 548
+ G ++ + + E + V+ W +L+ A S HG+ E GK D
Sbjct: 534 YSQCGTIQNSLEVFNQMSE-KDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAA 592
Query: 549 ILAAPASSAPH 559
+A S+ H
Sbjct: 593 TFSAVLSACSH 603
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 298 bits (763), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 180/583 (30%), Positives = 301/583 (51%), Gaps = 13/583 (2%)
Query: 79 RNALFVWNSLLSMYSKCGELQDAIKLFDR-MPVRDTVSWNSMISGFLRNRDFDAGFRFFK 137
+ ALF S L + E Q+ LF+R + D SWNS+I+ R+ D F
Sbjct: 6 KKALFCSVSRLLHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFS 65
Query: 138 QMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYF 197
M + +R ++ + AC + H FV G++ +I V +ALI Y
Sbjct: 66 SMRKLSLYPTR---SSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYS 122
Query: 198 KCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLS 257
CG R+VFDE+ +RN+V+WT++I G N D + LF + + +L
Sbjct: 123 TCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLD 182
Query: 258 SL------MACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGS--LEGAWQI 309
S+ ACS V A IH + K G + + + L+D Y+K G + A +I
Sbjct: 183 SMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKI 242
Query: 310 FESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGI-EVDANMVSAVLGVFGVGTS 368
F+ + D VS I+ +AQ+G EA ++F R+V + +A +S VL +
Sbjct: 243 FDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGA 302
Query: 369 LPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAA 428
L +GK IH +I+ + V +I+MY KCG + + + F M KN SW ++IA
Sbjct: 303 LRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAG 362
Query: 429 FARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSP 488
+ HG ++AL+ + M G+ P +TF+S+L ACSHAGL +G + +M + P
Sbjct: 363 YGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEP 422
Query: 489 RSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQL 548
EHY C+VD+LGRAG L++A + I+ + ++W +LL AC IH + E+ + + +L
Sbjct: 423 GLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARL 482
Query: 549 ILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVG 608
++ ++L+++IY+ G+WK+ MK +G+ K G S +E++ +V F++G
Sbjct: 483 FELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIG 542
Query: 609 DKLHPQADIIFLELSRLLKHLKDEGYVPDKRCILYYLDQDKKD 651
D+ HPQ + I+ L+ L + L + GYV + + + +D+++K+
Sbjct: 543 DEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKE 585
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 201/376 (53%), Gaps = 12/376 (3%)
Query: 67 KQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRN 126
KQ +F ++ +FV ++L+ MYS CG+L+DA K+FD +P R+ VSW SMI G+ N
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155
Query: 127 RDFDAGFRFFKQM--SESRTVYSRF-DKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFE 183
+ FK + E+ + F D L +++SAC ++ IH V GF+
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215
Query: 184 REITVGNALITSYFKC--GCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFA 241
R ++VGN L+ +Y K G R++FD++++++ V++ +++S AQ+ + + +F
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFR 275
Query: 242 QM-RGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKC 300
++ + V+ N +T + L+A S AL G+ IH + ++G++ D+ + ++++D+Y KC
Sbjct: 276 RLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKC 335
Query: 301 GSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVD-ANMVSAV 359
G +E A + F+ + + S T ++ + +G +A+++F ++ G+ + VS +
Sbjct: 336 GRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVL 395
Query: 360 LGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSN--GLINMYSKCGELHDSLQVFYEMTQK 417
G + + +++ K F P + + ++++ + G L + + M K
Sbjct: 396 AACSHAGLHVEGWRWFNAM--KGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMK 453
Query: 418 -NSISWNSVIAAFARH 432
+SI W+S++AA H
Sbjct: 454 PDSIIWSSLLAACRIH 469
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 144/278 (51%), Gaps = 13/278 (4%)
Query: 37 LNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCG 96
L+ L S++S C R L SIH+ +IK+ FD + V N+LL Y+K G
Sbjct: 181 LDSMGLVSVISACSRVPAKGLTESIHSFVIKR----GFD----RGVSVGNTLLDAYAKGG 232
Query: 97 E--LQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATL 154
E + A K+FD++ +D VS+NS++S + ++ + F F+++ +++ V F+ TL
Sbjct: 233 EGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVV--TFNAITL 290
Query: 155 TTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIE 214
+T+L A + + IH V G E ++ VG ++I Y KCG R+ FD M
Sbjct: 291 STVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKN 350
Query: 215 RNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEG-RK 273
+NV +WTA+I+G + L LF M V PN +T++S L ACS EG R
Sbjct: 351 KNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRW 410
Query: 274 IHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFE 311
+ + + G++ L ++DL + G L+ A+ + +
Sbjct: 411 FNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQ 448
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 179/607 (29%), Positives = 325/607 (53%), Gaps = 21/607 (3%)
Query: 17 SLKSKAP-ISQYPFPATSESVL-----NHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPP 70
S S+ P + Y FP T+ N + +SL+ VC ++ +GSS++++IIK
Sbjct: 171 SAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKL-- 228
Query: 71 FFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFD 130
+ + V S+L MYS CG+L+ A ++FD + RD V+WN+MI G L+N +
Sbjct: 229 ------GYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIE 282
Query: 131 AGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGN 190
G FF+ M S ++F T + +L+ C S+ ++IH + V ++ + N
Sbjct: 283 DGLMFFRNMLMSGVDPTQF---TYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDN 339
Query: 191 ALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQM-RGGSVS 249
AL+ Y CG + VF + N+V+W ++ISG ++N E + ++ ++ R +
Sbjct: 340 ALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPR 399
Query: 250 PNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQI 309
P+ T+ +++ A + + G+ +HG + KLG + + + + L+ +Y K E A ++
Sbjct: 400 PDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKV 459
Query: 310 FESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSL 369
F+ +E D V T ++V ++ G E A+Q F + D +S+V+G L
Sbjct: 460 FDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAML 519
Query: 370 PLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAF 429
G+ H L I+ F V L++MY K G+ + +F + + WNS++ A+
Sbjct: 520 RQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAY 579
Query: 430 ARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPR 489
++HG +AL F+E++ G P VT+LSLL ACSH G +G +FL + ++ +
Sbjct: 580 SQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQG-KFLWNQMKEQGIKAG 638
Query: 490 SEHYACVVDMLGRAGLLKEAKNFIEGLPE-NRGVLVWQALLGACSIHGDSEMGKFAADQL 548
+HY+C+V+++ +AGL+ EA IE P N +W+ LL AC + ++G +AA+Q+
Sbjct: 639 FKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQI 698
Query: 549 ILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSS-FVV 607
+ P +A H+L++N+Y+ G+W++ A ++++ +K+ G+SWIE++ + F
Sbjct: 699 LKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFSS 758
Query: 608 GDKLHPQ 614
GD+ +P+
Sbjct: 759 GDQSNPE 765
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/463 (28%), Positives = 227/463 (49%), Gaps = 21/463 (4%)
Query: 86 NSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDA-GFRFFKQMSESRT 144
N+L+SMY +CG L+ A K+FD+MP R+ VS+N++ S + RN DF + F M+
Sbjct: 136 NNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFE-- 193
Query: 145 VYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQ 204
Y + + +T T+++ C E + ++ + G+ + V +++ Y CG
Sbjct: 194 -YVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLES 252
Query: 205 GRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSG 264
R++FD + R+ V W +I G +N+ EDGL F M V P TY L CS
Sbjct: 253 ARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSK 312
Query: 265 VQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVI 324
+ + + G+ IH + +DL +++AL+D+Y CG + A+ +F + VS I
Sbjct: 313 LGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSI 372
Query: 325 LVAFAQNGFEEEAIQIFTRIVTLGI-EVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKN 383
+ ++NGF E+A+ ++ R++ + D SA + GK +H + K
Sbjct: 373 ISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLG 432
Query: 384 FSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYE 443
+ ++ FV L++MY K E + +VF M +++ + W +I +R G+ A+QF+
Sbjct: 433 YERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFI 492
Query: 444 EMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACV------- 496
EM + S++ ACS ++ +G F H L+ R+ + CV
Sbjct: 493 EMYREKNRSDGFSLSSVIGACSDMAMLRQGEVF-------HCLAIRT-GFDCVMSVCGAL 544
Query: 497 VDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSE 539
VDM G+ G + A+ I L N + W ++LGA S HG E
Sbjct: 545 VDMYGKNGKYETAET-IFSLASNPDLKCWNSMLGAYSQHGMVE 586
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 193/397 (48%), Gaps = 24/397 (6%)
Query: 86 NSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGF--------LRNRDFDAG---FR 134
N+L+SMY +C L+ A K+FD+MP R+ V+ + + F L ++ G
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMI 85
Query: 135 FFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFV---GGFEREITVGNA 191
FF ++E +++ + C +R IH LV G N
Sbjct: 86 FFMPLNEI--------ASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNN 137
Query: 192 LITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYED-GLRLFAQMRGGSVSP 250
LI+ Y +CG Q R+VFD+M RNVV++ A+ S ++N + L M V P
Sbjct: 138 LISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKP 197
Query: 251 NTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIF 310
N+ T+ S + C+ ++ + G ++ + KLG ++ ++++++ +YS CG LE A +IF
Sbjct: 198 NSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIF 257
Query: 311 ESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLP 370
+ D V+ ++V +N E+ + F ++ G++ S VL S
Sbjct: 258 DCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYS 317
Query: 371 LGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFA 430
LGK IH+ II + + + N L++MY CG++ ++ VF + N +SWNS+I+ +
Sbjct: 318 LGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCS 377
Query: 431 RHGDGSRALQFYEE-MRVGGIAPTDVTFLSLLHACSH 466
+G G +A+ Y +R+ P + TF + + A +
Sbjct: 378 ENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAE 414
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 179/377 (47%), Gaps = 24/377 (6%)
Query: 189 GNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGL-AQNELYEDGLRLFAQM-RGG 246
N LI+ Y +C Q R+VFD+M +RN+VT + GL A E G L +Q+ + G
Sbjct: 25 NNNLISMYVRCSSLEQARKVFDKMPQRNIVT----LFGLSAVFEYVSMGSSLHSQIIKLG 80
Query: 247 SVSPNTLTYLSSLMA--------CSGVQALAEGRKIHGLLWKLGMQSDLCIESA-----L 293
S L+ + + C + L R+IH L+ G + ES L
Sbjct: 81 SFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAG--AGAATESPYANNNL 138
Query: 294 MDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQN-GFEEEAIQIFTRIVTLGIEVD 352
+ +Y +CGSLE A ++F+ + VS + A+++N F A + T + ++ +
Sbjct: 139 ISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPN 198
Query: 353 ANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFY 412
++ ++++ V V + +G ++S IIK +S N V ++ MYS CG+L + ++F
Sbjct: 199 SSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFD 258
Query: 413 EMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEK 472
+ +++++WN++I ++ L F+ M + G+ PT T+ +L+ CS G
Sbjct: 259 CVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSL 318
Query: 473 GMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGAC 532
G + L+ A ++DM G ++EA ++ G N ++ W +++ C
Sbjct: 319 GKLIHARIIVSDSLADLPLDNA-LLDMYCSCGDMREAF-YVFGRIHNPNLVSWNSIISGC 376
Query: 533 SIHGDSEMGKFAADQLI 549
S +G E +L+
Sbjct: 377 SENGFGEQAMLMYRRLL 393
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 296 bits (758), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 167/559 (29%), Positives = 300/559 (53%), Gaps = 7/559 (1%)
Query: 97 ELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTT 156
E +D I L D + V+ S I + F F F ++ E R + + +T
Sbjct: 72 ESKDQI-LDDTQISKSGVTICSQIEKLVLCNRFREAFELF-EILEIRCSF-KVGVSTYDA 128
Query: 157 MLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERN 216
++ AC + + ++G + GFE E + N ++ + KCG R++FDE+ ERN
Sbjct: 129 LVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERN 188
Query: 217 VVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHG 276
+ ++ ++ISG Y + LF M T T+ L A +G+ ++ G+++H
Sbjct: 189 LYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHV 248
Query: 277 LLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEE 336
KLG+ + + L+D+YSKCG +E A FE E V+ ++ +A +G+ EE
Sbjct: 249 CALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEE 308
Query: 337 AIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLIN 396
A+ + + G+ +D +S ++ + L L KQ H+ +I+ F + L++
Sbjct: 309 ALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVD 368
Query: 397 MYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVT 456
YSK G + + VF ++ +KN ISWN+++ +A HG G+ A++ +E+M +AP VT
Sbjct: 369 FYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVT 428
Query: 457 FLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGL 516
FL++L AC+++GL E+G E +SM+ H + PR+ HYAC++++LGR GLL EA FI
Sbjct: 429 FLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRA 488
Query: 517 PENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERA 576
P V +W ALL AC + + E+G+ A++L P +V+M N+Y++ GK E A
Sbjct: 489 PLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAA 548
Query: 577 GAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADI----IFLELSRLLKHLKDE 632
G ++ ++ KG++ +W+E+ Q SF+ GD+ + I+ ++ L++ + +
Sbjct: 549 GVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQIYQKVDELMEEISEY 608
Query: 633 GYVPDKRCILYYLDQDKKD 651
GY +++ +L +D+ +++
Sbjct: 609 GYSEEEQHLLPDVDEKEEE 627
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 138/297 (46%), Gaps = 3/297 (1%)
Query: 64 RIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGF 123
R +K+ F + ++ N +L M+ KCG + DA +LFD +P R+ S+ S+ISGF
Sbjct: 140 RCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGF 199
Query: 124 LRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFE 183
+ ++ F FK M E S + T ML A G V + +H G
Sbjct: 200 VNFGNYVEAFELFKMMWEE---LSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVV 256
Query: 184 REITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQM 243
V LI Y KCG R F+ M E+ V W VI+G A + E+ L L M
Sbjct: 257 DNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDM 316
Query: 244 RGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSL 303
R VS + T + + + L ++ H L + G +S++ +AL+D YSK G +
Sbjct: 317 RDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRV 376
Query: 304 EGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVL 360
+ A +F+ + +S ++ +A +G +A+++F +++ + + AVL
Sbjct: 377 DTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVL 433
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 169/373 (45%), Gaps = 61/373 (16%)
Query: 53 GNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRD 112
G++++G +H +K D++ FV L+ MYSKCG+++DA F+ MP +
Sbjct: 238 GSIYVGKQLHVCALK---LGVVDNT-----FVSCGLIDMYSKCGDIEDARCAFECMPEKT 289
Query: 113 TVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRM 172
TV+WN++I+G+ + + M +S D+ TL+ M+ +++
Sbjct: 290 TVAWNNVIAGYALHGYSEEALCLLYDMRDSGV---SIDQFTLSIMIRISTKLAKLELTKQ 346
Query: 173 IHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNEL 232
H + GFE EI AL+ Y K G R VFD++ +N+++W A++ G A +
Sbjct: 347 AHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGR 406
Query: 233 YEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESA 292
D ++LF +M +V+PN +T+L+ L AC+
Sbjct: 407 GTDAVKLFEKMIAANVAPNHVTFLAVLSACA----------------------------- 437
Query: 293 LMDLYSKCGSLEGAWQIFESAEELDGVS-----LTVILVAFAQNGFEEEAIQIFTRIVTL 347
YS G E W+IF S E+ G+ ++ ++G +EAI R
Sbjct: 438 ----YS--GLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRA--- 488
Query: 348 GIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNP-FVSNGLI--NMYSKCGEL 404
++ NM +A+L + +L LG+ ++ +K + P + N ++ NMY+ G+
Sbjct: 489 PLKTTVNMWAALLNACRMQENLELGR----VVAEKLYGMGPEKLGNYVVMYNMYNSMGKT 544
Query: 405 HDSLQVFYEMTQK 417
++ V + K
Sbjct: 545 AEAAGVLETLESK 557
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 296 bits (757), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 178/587 (30%), Positives = 303/587 (51%), Gaps = 14/587 (2%)
Query: 49 CGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRM 108
C R ++ +HA +IK P F+S +FV + + M+ KC + A K+F+RM
Sbjct: 62 CARLADVGCCEMVHAHLIKSP-FWS-------DVFVGTATVDMFVKCNSVDYAAKVFERM 113
Query: 109 PVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSS 168
P RD +WN+M+SGF ++ D F F++M + D T+ T++ + +
Sbjct: 114 PERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITP---DSVTVMTLIQSASFEKSLK 170
Query: 169 VSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMI--ERNVVTWTAVISG 226
+ +H + G + ++TV N I++Y KCG + VF+ + +R VV+W ++
Sbjct: 171 LLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKA 230
Query: 227 LAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSD 286
+ D L+ M P+ T+++ +C + L +GR IH LG D
Sbjct: 231 YSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQD 290
Query: 287 LCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVT 346
+ + + +YSK A +F+ VS TV++ +A+ G +EA+ +F ++
Sbjct: 291 IEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIK 350
Query: 347 LGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLI-IKKNFSQNPFVSNGLINMYSKCGELH 405
G + D + +++ G SL GK I + I N + N LI+MYSKCG +H
Sbjct: 351 SGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIH 410
Query: 406 DSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACS 465
++ +F +K ++W ++IA +A +G AL+ + +M P +TFL++L AC+
Sbjct: 411 EARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACA 470
Query: 466 HAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVW 525
H+G +EKG E+ M + + +SP +HY+C+VD+LGR G L+EA I + +W
Sbjct: 471 HSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIW 530
Query: 526 QALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEK 585
ALL AC IH + ++ + AA+ L P +AP+V MANIY+A G W A MK++
Sbjct: 531 GALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQR 590
Query: 586 GVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDE 632
+ K G S I+++ + SF VG+ H + ++I+ L+ L KD+
Sbjct: 591 NIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYFTLNGLSLFAKDK 637
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 116/242 (47%), Gaps = 4/242 (1%)
Query: 235 DGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALM 294
+ L LF +M+ G PN T+ AC+ + + +H L K SD+ + +A +
Sbjct: 35 ESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATV 94
Query: 295 DLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDAN 354
D++ KC S++ A ++FE E D + +L F Q+G ++A +F + I D+
Sbjct: 95 DMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSV 154
Query: 355 MVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEM 414
V ++ SL L + +H++ I+ V+N I+ Y KCG+L DS ++ +E
Sbjct: 155 TVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDL-DSAKLVFEA 213
Query: 415 TQKNS---ISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVE 471
+ +SWNS+ A++ G+ A Y M P TF++L +C + +
Sbjct: 214 IDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLT 273
Query: 472 KG 473
+G
Sbjct: 274 QG 275
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 10/120 (8%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDA 101
L SL+S CG+ G+L G I AR +R+ + + N+L+ MYSKCG + +A
Sbjct: 360 LLSLISGCGKFGSLETGKWIDARA-------DIYGCKRDNVMICNALIDMYSKCGSIHEA 412
Query: 102 IKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSAC 161
+FD P + V+W +MI+G+ N F + F +M + + + + T +L AC
Sbjct: 413 RDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMID---LDYKPNHITFLAVLQAC 469
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 296 bits (757), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 167/484 (34%), Positives = 262/484 (54%), Gaps = 34/484 (7%)
Query: 184 REITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQM 243
R + N +++ Y K G + R VFD M ER+VV+W ++ G AQ+ + L + +
Sbjct: 111 RNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEF 170
Query: 244 RGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSL 303
R + N ++ L AC + L R+ HG + G S++ + +++D Y+KCG +
Sbjct: 171 RRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQM 230
Query: 304 EGAWQIF------------------------ESAEEL-------DGVSLTVILVAFAQNG 332
E A + F E+AE+L + VS T ++ + + G
Sbjct: 231 ESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQG 290
Query: 333 FEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSN 392
A+ +F +++ LG++ + S+ L SL GK+IH +I+ N N V +
Sbjct: 291 SGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVIS 350
Query: 393 GLINMYSKCGELHDSLQVFYEMTQK-NSISWNSVIAAFARHGDGSRALQFYEEMRVGGIA 451
LI+MYSK G L S +VF K + + WN++I+A A+HG G +AL+ ++M +
Sbjct: 351 SLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQ 410
Query: 452 PTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKN 511
P T + +L+ACSH+GLVE+G+ + SMT H + P EHYAC++D+LGRAG KE
Sbjct: 411 PNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMR 470
Query: 512 FIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGK 571
IE +P +W A+LG C IHG+ E+GK AAD+LI P SSAP++L+++IY+ GK
Sbjct: 471 KIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGK 530
Query: 572 WKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQA--DIIFLELSRLLKHL 629
W+ MK++ V KE VSWIEI+K+V +F V D H A + I+ L L +
Sbjct: 531 WELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNLAAVI 590
Query: 630 KDEG 633
++E
Sbjct: 591 EEEA 594
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 201/451 (44%), Gaps = 61/451 (13%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARI----IKQPPFF--------------------SFDSS 77
L+SLL CG +L G IH + K+P FD
Sbjct: 49 LASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQM 108
Query: 78 RRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFK 137
L+ WN+++S Y K G L A +FD MP RD VSWN+M+ G+ ++ + F+K
Sbjct: 109 HLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYK 168
Query: 138 QMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYF 197
+ S +F++ + +L+AC ++R HG V V GF + + ++I +Y
Sbjct: 169 EFRRSGI---KFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYA 225
Query: 198 KCGCFCQGRQVFDEMI-------------------------------ERNVVTWTAVISG 226
KCG ++ FDEM E+N V+WTA+I+G
Sbjct: 226 KCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAG 285
Query: 227 LAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSD 286
+ L LF +M V P T+ S L A + + +L G++IHG + + ++ +
Sbjct: 286 YVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPN 345
Query: 287 LCIESALMDLYSKCGSLEGAWQIFESAEEL-DGVSLTVILVAFAQNGFEEEAIQIFTRIV 345
+ S+L+D+YSK GSLE + ++F ++ D V ++ A AQ+G +A+++ ++
Sbjct: 346 AIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMI 405
Query: 346 TLGIEVDANMVSAVLGVFGVGTSLPLG-KQIHSLIIKKNFSQNPFVSNGLINMYSKCGEL 404
++ + + +L + G + S+ ++ + LI++ + G
Sbjct: 406 KFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCF 465
Query: 405 HDSLQVFYEMT-QKNSISWNSVIAAFARHGD 434
+ ++ EM + + WN+++ HG+
Sbjct: 466 KELMRKIEEMPFEPDKHIWNAILGVCRIHGN 496
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 143/344 (41%), Gaps = 65/344 (18%)
Query: 328 FAQNGFEEEAIQIFTRIVTL---GIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNF 384
+++ + E Q +R+ +L GI + ++++++L G SL GK IH + F
Sbjct: 18 LSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGF 77
Query: 385 SQ-NPFVSNGLINMYSKCGELHDSLQVFYE------------------------------ 413
+ N +SN LI MY KCG+ D+ +VF +
Sbjct: 78 KRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFD 137
Query: 414 -MTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVE- 471
M +++ +SWN+++ +A+ G+ AL FY+E R GI + +F LL AC + ++
Sbjct: 138 SMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQL 197
Query: 472 ----KGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQA 527
G + + LS ++D + G ++ AK + + + + +W
Sbjct: 198 NRQAHGQVLVAGFLSNVVLS------CSIIDAYAKCGQMESAKRCFDEMTV-KDIHIWTT 250
Query: 528 LLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANI--YSAEGKWKERAGAIKRMKEK 585
L+ + GD E AA++L P + P A I Y +G ++M
Sbjct: 251 LISGYAKLGDME----AAEKLFCEMPEKN-PVSWTALIAGYVRQGSGNRALDLFRKMIAL 305
Query: 586 GVAKE-----------VGVSWIEIDKQVSSFVVGDKLHPQADII 618
GV E ++ + K++ +++ + P A +I
Sbjct: 306 GVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVI 349
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 295 bits (756), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 157/463 (33%), Positives = 260/463 (56%), Gaps = 1/463 (0%)
Query: 190 NALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVS 249
N LI Y + G R+VFDEM +R + TW A+I+GL Q E E+GL LF +M G S
Sbjct: 29 NILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFS 88
Query: 250 PNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQI 309
P+ T S +G+++++ G++IHG K G++ DL + S+L +Y + G L+ +
Sbjct: 89 PDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIV 148
Query: 310 FESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSL 369
S + V+ +++ AQNG E + ++ + G + VL
Sbjct: 149 IRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIR 208
Query: 370 PLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAF 429
G+QIH+ IK S V + LI+MYSKCG L D+ + F E ++ + W+S+I+A+
Sbjct: 209 GQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAY 268
Query: 430 ARHGDGSRALQFYEEM-RVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSP 488
HG G A++ + M + +V FL+LL+ACSH+GL +KG+E M + P
Sbjct: 269 GFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKP 328
Query: 489 RSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQL 548
+HY CVVD+LGRAG L +A+ I +P +++W+ LL AC+IH ++EM + ++
Sbjct: 329 GLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEI 388
Query: 549 ILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVG 608
+ P SA +VL+AN++++ +W++ + K M++K V KE G+SW E +V F +G
Sbjct: 389 LQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMG 448
Query: 609 DKLHPQADIIFLELSRLLKHLKDEGYVPDKRCILYYLDQDKKD 651
D+ ++ I+ L L +K +GY PD +L+ +D+++K+
Sbjct: 449 DRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKE 491
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 188/388 (48%), Gaps = 10/388 (2%)
Query: 78 RRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFK 137
R+ N L++ Y + G+L +A K+FD MP R +WN+MI+G ++ + G F+
Sbjct: 21 RKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFR 80
Query: 138 QMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYF 197
+M + D+ TL ++ S G S+ + IHG G E ++ V ++L Y
Sbjct: 81 EM---HGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYM 137
Query: 198 KCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLS 257
+ G G V M RN+V W +I G AQN E L L+ M+ PN +T+++
Sbjct: 138 RNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVT 197
Query: 258 SLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELD 317
L +CS + +G++IH K+G S + + S+L+ +YSKCG L A + F E+ D
Sbjct: 198 VLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDED 257
Query: 318 GVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTS--LPLGKQI 375
V + ++ A+ +G +EAI++F + ++ N V+ + ++ S G ++
Sbjct: 258 EVMWSSMISAYGFHGQGDEAIELFNTMAE-QTNMEINEVAFLNLLYACSHSGLKDKGLEL 316
Query: 376 HSLIIKK-NFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSIS-WNSVIAAFARHG 433
++++K F ++++ + G L + + M K I W ++++A H
Sbjct: 317 FDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHK 376
Query: 434 DGSRALQFYEEMRVGGIAPTDVTFLSLL 461
+ A + ++E + I P D LL
Sbjct: 377 NAEMAQRVFKE--ILQIDPNDSACYVLL 402
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 155/352 (44%), Gaps = 20/352 (5%)
Query: 57 LGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSW 116
+G IH IK D L V +SL MY + G+LQD + MPVR+ V+W
Sbjct: 109 IGQQIHGYTIKYG--LELD------LVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAW 160
Query: 117 NSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGL 176
N++I G +N + +K M S R +K T T+LS+C + IH
Sbjct: 161 NTLIMGNAQNGCPETVLYLYKMMKISGC---RPNKITFVTVLSSCSDLAIRGQGQQIHAE 217
Query: 177 VFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDG 236
G + V ++LI+ Y KCGC + F E + + V W+++IS + ++
Sbjct: 218 AIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEA 277
Query: 237 LRLFAQM-RGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLL-WKLGMQSDLCIESALM 294
+ LF M ++ N + +L+ L ACS +G ++ ++ K G + L + ++
Sbjct: 278 IELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVV 337
Query: 295 DLYSKCGSLEGAWQIFESAE-ELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDA 353
DL + G L+ A I S + D V +L A + E A ++F I +++D
Sbjct: 338 DLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEI----LQIDP 393
Query: 354 NMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELH 405
N + + + V S + + ++K+ I+ + GE+H
Sbjct: 394 NDSACYVLLANVHASAKRWRDVSE--VRKSMRDKNVKKEAGISWFEHKGEVH 443
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 6/171 (3%)
Query: 369 LPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAA 428
P ++ + KKN+ SN LIN Y + G+L ++ +VF EM + +WN++IA
Sbjct: 10 FPSAVAVYGRMRKKNY----MSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAG 65
Query: 429 FARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSP 488
+ L + EM G +P + T S+ + V G + + T + L
Sbjct: 66 LIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQ-IHGYTIKYGLEL 124
Query: 489 RSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSE 539
+ + M R G L++ + I +P R ++ W L+ + +G E
Sbjct: 125 DLVVNSSLAHMYMRNGKLQDGEIVIRSMPV-RNLVAWNTLIMGNAQNGCPE 174
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 295 bits (756), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 189/630 (30%), Positives = 312/630 (49%), Gaps = 40/630 (6%)
Query: 32 TSESVLNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSM 91
++ S + H L SLL C LHL II F SSR L + +L
Sbjct: 46 STHSFVLHNPLLSLLEKCKL--LLHLKQIQAQMIINGLILDPFASSR---LIAFCAL--- 97
Query: 92 YSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDK 151
S+ L ++K+ + + SWN I GF + + F +KQM SR D
Sbjct: 98 -SESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDH 156
Query: 152 ATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDE 211
T + C SS+ MI G V E V NA I + CG R+VFDE
Sbjct: 157 FTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDE 216
Query: 212 MIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEG 271
R++V+W +I+G + E + ++ M V P+ +T + + +CS + L G
Sbjct: 217 SPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRG 276
Query: 272 RKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQN 331
++ + + + G++ + + +ALMD++SKCG + A +IF++ E+ VS T ++ +A+
Sbjct: 277 KEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARC 336
Query: 332 GF-------------------------------EEEAIQIFTRIVTLGIEVDANMVSAVL 360
G ++A+ +F + T + D + L
Sbjct: 337 GLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCL 396
Query: 361 GVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSI 420
+L +G IH I K + S N + L++MY+KCG + ++L VF+ + +NS+
Sbjct: 397 SACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSL 456
Query: 421 SWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSM 480
++ ++I A HGD S A+ ++ EM GIAP ++TF+ LL AC H G+++ G ++ M
Sbjct: 457 TYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQM 516
Query: 481 TRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEM 540
L+P+ +HY+ +VD+LGRAGLL+EA +E +P VW ALL C +HG+ E+
Sbjct: 517 KSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVEL 576
Query: 541 GKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDK 600
G+ AA +L+ P+ S +VL+ +Y W++ A + M E+GV K G S IE++
Sbjct: 577 GEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNG 636
Query: 601 QVSSFVVGDKLHPQADIIFLELSRLLKHLK 630
V F+V DK P+++ I+ L L +H++
Sbjct: 637 IVCEFIVRDKSRPESEKIYDRLHCLGRHMR 666
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 73/155 (47%), Gaps = 11/155 (7%)
Query: 7 FNTHLPSWVDSLKSKAPISQYPFPATSESVLNHAHLSSLLSVCGRDGNLHLGSSIHARII 66
+N + V + + + ++ + TS + + + LS C + G L +G IH I
Sbjct: 357 WNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIE 416
Query: 67 KQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRN 126
K + S AL SL+ MY+KCG + +A+ +F + R+++++ ++I G +
Sbjct: 417 K------YSLSLNVAL--GTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALH 468
Query: 127 RDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSAC 161
D +F +M ++ D+ T +LSAC
Sbjct: 469 GDASTAISYFNEMIDAGIAP---DEITFIGLLSAC 500
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 179/591 (30%), Positives = 290/591 (49%), Gaps = 31/591 (5%)
Query: 32 TSESVLNHAHLSSLLSVCGRDGNLHLGSSIHARI-------------------IKQPPFF 72
+ E N S++L CG G++ LG ++ RI +K
Sbjct: 100 SEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLI 159
Query: 73 SFDSSRRNAL----FVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRD 128
+SS + L WN+L+S Y K G + +A+ LF RMP + VSWN +ISGF+ ++
Sbjct: 160 EANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFV-DKG 218
Query: 129 FDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITV 188
F +M V D L L AC ++ + +H V G E
Sbjct: 219 SPRALEFLVRMQREGLV---LDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFA 275
Query: 189 GNALITSYFKCGCFCQGRQVFDE---MIERNVVTWTAVISGLAQNELYEDGLRLFAQMRG 245
+ALI Y CG VF + + +V W +++SG NE E L L Q+
Sbjct: 276 ISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQ 335
Query: 246 GSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEG 305
+ ++ T +L C L G ++H L+ G + D + S L+DL++ G+++
Sbjct: 336 SDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQD 395
Query: 306 AWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGV 365
A ++F D ++ + ++ ++GF A +F ++ LG++ D +VS +L V
Sbjct: 396 AHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSS 455
Query: 366 GTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSV 425
SL GKQIH L IKK + P + L++MY KCGE+ + + +F M +++ +SW +
Sbjct: 456 LASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGI 515
Query: 426 IAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHR 485
I F ++G A +++ +M GI P VTFL LL AC H+GL+E+ L +M ++
Sbjct: 516 IVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYG 575
Query: 486 LSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAA 545
L P EHY CVVD+LG+AGL +EA I +P +W +LL AC H ++ + A
Sbjct: 576 LEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIA 635
Query: 546 DQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWI 596
++L+ P + + ++N Y+ G W + + + K+ G AKE G+SWI
Sbjct: 636 EKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREAAKKLG-AKESGMSWI 685
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/515 (22%), Positives = 228/515 (44%), Gaps = 47/515 (9%)
Query: 49 CGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRM 108
CG+ G SI A +IKQ +F+ N+++SMY L DA K+FD M
Sbjct: 15 CGKVQAFKRGESIQAHVIKQ--------GISQNVFIANNVISMYVDFRLLSDAHKVFDEM 66
Query: 109 PVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSS 168
R+ V+W +M+SG+ + + +++M +S ++ + +L AC
Sbjct: 67 SERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEE--EAANEFMYSAVLKACGLVGDIQ 124
Query: 169 VSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLA 228
+ +++ + ++ + N+++ Y K G + F E++ + +W +ISG
Sbjct: 125 LGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYC 184
Query: 229 QNELYEDGLRLFAQMRGGSV--------------SPNTLTYL----------------SS 258
+ L ++ + LF +M +V SP L +L
Sbjct: 185 KAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCG 244
Query: 259 LMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDG 318
L ACS L G+++H + K G++S SAL+D+YS CGSL A +F +
Sbjct: 245 LKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVN 304
Query: 319 VSLTV---ILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQI 375
S+ V +L F N E A+ + +I + D+ +S L + +L LG Q+
Sbjct: 305 SSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQV 364
Query: 376 HSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDG 435
HSL++ + + V + L+++++ G + D+ ++F+ + K+ I+++ +I + G
Sbjct: 365 HSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFN 424
Query: 436 SRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFL-VSMTRDHRLSPRSEHYA 494
S A + E+ G+ ++L CS + G + + + + + P +
Sbjct: 425 SLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTA--T 482
Query: 495 CVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALL 529
+VDM + G + +G+ E R V+ W ++
Sbjct: 483 ALVDMYVKCGEIDNGVVLFDGMLE-RDVVSWTGII 516
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 351 VDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQV 410
+D +++A L G + G+ I + +IK+ SQN F++N +I+MY L D+ +V
Sbjct: 3 MDLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKV 62
Query: 411 FYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEM-RVGGIAPTDVTFLSLLHACSHAGL 469
F EM+++N ++W ++++ + G ++A++ Y M A + + ++L AC G
Sbjct: 63 FDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGD 122
Query: 470 VEKG------------------MEFLVSM-TRDHR-----------LSPRSEHYACVVDM 499
++ G M +V M ++ R L P S + ++
Sbjct: 123 IQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISG 182
Query: 500 LGRAGLLKEAKNFIEGLPENRGVLVWQALL 529
+AGL+ EA +P+ V+ W L+
Sbjct: 183 YCKAGLMDEAVTLFHRMPQPN-VVSWNCLI 211
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 293 bits (750), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 164/479 (34%), Positives = 285/479 (59%), Gaps = 1/479 (0%)
Query: 173 IHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNEL 232
+HG V G V N LI Y K R+ F++ +++ TW+++IS AQNEL
Sbjct: 37 LHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNEL 96
Query: 233 YEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESA 292
L +M G++ P+ S+ +C+ + GR +H L K G +D+ + S+
Sbjct: 97 PWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSS 156
Query: 293 LMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVD 352
L+D+Y+KCG + A ++F+ + + V+ + ++ +AQ G EEA+ +F + + V+
Sbjct: 157 LVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVN 216
Query: 353 ANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFY 412
S+V+ V T L LG+QIH L IK +F + FV + L+++YSKCG + QVF
Sbjct: 217 DYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFN 276
Query: 413 EMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEK 472
E+ KN WN+++ A+A+H + ++ ++ M++ G+ P +TFL++L+ACSHAGLV++
Sbjct: 277 EVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDE 336
Query: 473 GMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGAC 532
G + M ++ R+ P +HYA +VDMLGRAG L+EA I +P + VW ALL +C
Sbjct: 337 GRYYFDQM-KESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSC 395
Query: 533 SIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVG 592
++H ++E+ FAAD++ P SS H+ ++N Y+A+G++++ A A K ++++G KE G
Sbjct: 396 TVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETG 455
Query: 593 VSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDEGYVPDKRCILYYLDQDKKD 651
+SW+E +V +F G++ H ++ I+ +L+ L + ++ GY+ D +L +D D+K+
Sbjct: 456 LSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVDGDEKN 514
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 170/353 (48%), Gaps = 4/353 (1%)
Query: 83 FVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSES 142
V N+L++ YSK D+ + F+ P + + +W+S+IS F +N F K+M
Sbjct: 51 LVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAG 110
Query: 143 RTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCF 202
R D L + +C + R +H L G++ ++ VG++L+ Y KCG
Sbjct: 111 NL---RPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEI 167
Query: 203 CQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMAC 262
R++FDEM +RNVVTW+ ++ G AQ E+ L LF + +++ N ++ S + C
Sbjct: 168 VYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVC 227
Query: 263 SGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLT 322
+ L GR+IHGL K S + S+L+ LYSKCG EGA+Q+F +
Sbjct: 228 ANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWN 287
Query: 323 VILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKK 382
+L A+AQ+ ++ I++F R+ G++ + VL + G+ + +
Sbjct: 288 AMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKES 347
Query: 383 NFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSIS-WNSVIAAFARHGD 434
L++M + G L ++L+V M + S W +++ + H +
Sbjct: 348 RIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKN 400
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 146/282 (51%), Gaps = 4/282 (1%)
Query: 259 LMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDG 318
L++ + ++ +G ++HG + K G+ + + L++ YSK + + FE + +
Sbjct: 22 LLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSS 81
Query: 319 VSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSL 378
+ + I+ FAQN +++ +++ + D +++ + + + +G+ +H L
Sbjct: 82 TTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCL 141
Query: 379 IIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRA 438
+K + + FV + L++MY+KCGE+ + ++F EM Q+N ++W+ ++ +A+ G+ A
Sbjct: 142 SMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEA 201
Query: 439 LQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVD 498
L ++E +A D +F S++ C+++ L+E G + + ++ S + +V
Sbjct: 202 LWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQ-IHGLSIKSSFDSSSFVGSSLVS 260
Query: 499 MLGRAGLLKEAKNFIEGLP-ENRGVLVWQALLGACSIHGDSE 539
+ + G+ + A +P +N G +W A+L A + H ++
Sbjct: 261 LYSKCGVPEGAYQVFNEVPVKNLG--IWNAMLKAYAQHSHTQ 300
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 293 bits (750), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 174/527 (33%), Positives = 279/527 (52%), Gaps = 12/527 (2%)
Query: 86 NSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRN-RDFDAGFRFFKQMSESRT 144
N L+ + G+ + LF + S+N MI G D +A +++M S
Sbjct: 69 NFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGL 128
Query: 145 VYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQ 204
+ DK T + AC E V R +H +F G ER++ + ++LI Y KCG
Sbjct: 129 ---KPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGY 185
Query: 205 GRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSG 264
R++FDE+ ER+ V+W ++ISG ++ +D + LF +M P+ T +S L ACS
Sbjct: 186 ARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSH 245
Query: 265 VQALAEGRKIH--GLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLT 322
+ L GR + + K+G+ + L S L+ +Y KCG L+ A ++F + D V+ T
Sbjct: 246 LGDLRTGRLLEEMAITKKIGLSTFLG--SKLISMYGKCGDLDSARRVFNQMIKKDRVAWT 303
Query: 323 VILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKK 382
++ ++QNG EA ++F + G+ DA +S VL G +L LGKQI + +
Sbjct: 304 AMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASEL 363
Query: 383 NFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFY 442
+ N +V+ GL++MY KCG + ++L+VF M KN +WN++I A+A G AL +
Sbjct: 364 SLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLF 423
Query: 443 EEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGR 502
+ M V P+D+TF+ +L AC HAGLV +G + M+ L P+ EHY ++D+L R
Sbjct: 424 DRMSV---PPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSR 480
Query: 503 AGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSA-PHVL 561
AG+L EA F+E P ++ A+LGAC D + + A L+ A +A +V+
Sbjct: 481 AGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVI 540
Query: 562 MANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVG 608
+N+ + W E A M+++GV K G SWIEI+ ++ F+ G
Sbjct: 541 SSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAG 587
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 137/288 (47%), Gaps = 16/288 (5%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDA 101
L S+L C G+L G + I + S F+ + L+SMY KCG+L A
Sbjct: 236 LVSMLGACSHLGDLRTGRLLEEMAITKKIGLS--------TFLGSKLISMYGKCGDLDSA 287
Query: 102 IKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSAC 161
++F++M +D V+W +MI+ + +N F+ F +M ++ D TL+T+LSAC
Sbjct: 288 RRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSP---DAGTLSTVLSAC 344
Query: 162 DGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWT 221
+ + I + I V L+ Y KCG + +VF+ M +N TW
Sbjct: 345 GSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWN 404
Query: 222 AVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEG-RKIHGLLWK 280
A+I+ A ++ L LF +M SV P+ +T++ L AC + +G R H +
Sbjct: 405 AMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSM 461
Query: 281 LGMQSDLCIESALMDLYSKCGSLEGAWQIFES-AEELDGVSLTVILVA 327
G+ + + ++DL S+ G L+ AW+ E + D + L IL A
Sbjct: 462 FGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGA 509
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 291 bits (746), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 168/544 (30%), Positives = 284/544 (52%), Gaps = 13/544 (2%)
Query: 114 VSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMI 173
+S N +I + R Q S + T ++ C S + +
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQESSP-------SQQTYELLILCCGHRSSLSDALRV 99
Query: 174 HGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELY 233
H + G +++ + LI Y G R+VFD+ +R + W A+ L
Sbjct: 100 HRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHG 159
Query: 234 EDGLRLFAQMRGGSVSPNTLTYLSSLMACSG----VQALAEGRKIHGLLWKLGMQSDLCI 289
E+ L L+ +M V + TY L AC V L +G++IH L + G S + I
Sbjct: 160 EEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYI 219
Query: 290 ESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGI 349
+ L+D+Y++ G ++ A +F + VS + ++ +A+NG EA++ F ++
Sbjct: 220 MTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETK 279
Query: 350 EVDANMVS--AVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDS 407
+ N V+ +VL +L GK IH I+++ V + L+ MY +CG+L
Sbjct: 280 DSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVG 339
Query: 408 LQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHA 467
+VF M ++ +SWNS+I+++ HG G +A+Q +EEM G +PT VTF+S+L ACSH
Sbjct: 340 QRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHE 399
Query: 468 GLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQA 527
GLVE+G +M RDH + P+ EHYAC+VD+LGRA L EA ++ + G VW +
Sbjct: 400 GLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGS 459
Query: 528 LLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGV 587
LLG+C IHG+ E+ + A+ +L P ++ +VL+A+IY+ W E K ++ +G+
Sbjct: 460 LLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGL 519
Query: 588 AKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDEGYVPDKRCILYYLDQ 647
K G W+E+ +++ SFV D+ +P + I L +L + +K++GY+P + +LY L+
Sbjct: 520 QKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELET 579
Query: 648 DKKD 651
++K+
Sbjct: 580 EEKE 583
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 195/429 (45%), Gaps = 21/429 (4%)
Query: 15 VDSLKSKAPISQYPFPATSESVLNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSF 74
+ SL + + Q + ES + L+ CG +L +H I+
Sbjct: 53 IQSLCKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHIL-------- 104
Query: 75 DSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFR 134
D+ F+ L+ MYS G + A K+FD+ R WN++ +
Sbjct: 105 DNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLG 164
Query: 135 FFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRM----IHGLVFVGGFEREITVGN 190
+ +M+ RF T T +L AC E + M IH + G+ + +
Sbjct: 165 LYWKMNRIGVESDRF---TYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMT 221
Query: 191 ALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQM--RGGSV 248
L+ Y + GC VF M RNVV+W+A+I+ A+N + LR F +M
Sbjct: 222 TLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDS 281
Query: 249 SPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQ 308
SPN++T +S L AC+ + AL +G+ IHG + + G+ S L + SAL+ +Y +CG LE +
Sbjct: 282 SPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQR 341
Query: 309 IFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTS 368
+F+ + D VS ++ ++ +G+ ++AIQIF ++ G +VLG
Sbjct: 342 VFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGL 401
Query: 369 LPLGKQIHSLIIKKNFSQNPFVSN--GLINMYSKCGELHDSLQVFYEM-TQKNSISWNSV 425
+ GK++ + ++ P + + ++++ + L ++ ++ +M T+ W S+
Sbjct: 402 VEEGKRLFETMW-RDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSL 460
Query: 426 IAAFARHGD 434
+ + HG+
Sbjct: 461 LGSCRIHGN 469
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 291 bits (745), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 170/537 (31%), Positives = 288/537 (53%), Gaps = 51/537 (9%)
Query: 158 LSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNV 217
L C + ++ +H + G + + N L+ Y KCG QVFDEM R+
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 218 VTWTAVISGLAQNELYEDGLRLFAQMRGGS-VSPNTLTYLSSLMACSGVQALAEGRKIHG 276
+ W +V++ L Q L L +F+ + S + P+ + + + AC+ + ++ GR++H
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 277 LLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEE 336
+D ++S+L+D+Y+KCG L A +F+S + +S T ++ +A++G +EE
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189
Query: 337 AIQIFTRIVTL------------------GIE---------------VDANMVSAVLGVF 363
A+++F RI+ + G+E +D ++S+++G
Sbjct: 190 ALELF-RILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGAC 248
Query: 364 GVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWN 423
+ G+Q+H L+I F F+SN LI+MY+KC ++ + +F M ++ +SW
Sbjct: 249 ANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWT 308
Query: 424 SVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRD 483
S+I A+HG +AL Y++M G+ P +VTF+ L++ACSH G VEKG E SMT+D
Sbjct: 309 SLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKD 368
Query: 484 HRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKF 543
+ + P +HY C++D+LGR+GLL EA+N I +P W ALL AC G +MG
Sbjct: 369 YGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIR 428
Query: 544 AADQLI----LAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEID 599
AD L+ L P++ ++L++NIY++ W + + A +++ E V K+ G S +E+
Sbjct: 429 IADHLVSSFKLKDPST---YILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVR 485
Query: 600 KQVSSFVVGDKLHPQADIIFLELSRLLKHLKDE-----GYVPDKRCILYYLDQDKKD 651
K+ F G+ HP + IF RLLK L++E GYVPD IL+ +D+ +K+
Sbjct: 486 KETEVFYAGETSHPLKEDIF----RLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKE 538
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/441 (24%), Positives = 202/441 (45%), Gaps = 48/441 (10%)
Query: 41 HLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQD 100
H L +C R+ L ++HA I+K + N+L+++Y KCG
Sbjct: 5 HYLHQLQLCARNRTLTTAKALHAHIVKLGIV--------QCCPLANTLVNVYGKCGAASH 56
Query: 101 AIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSA 160
A+++FD MP RD ++W S+++ N+ +G S + R D + ++ A
Sbjct: 57 ALQVFDEMPHRDHIAWASVLTAL--NQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKA 114
Query: 161 CDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTW 220
C R +H V + + V ++L+ Y KCG + VFD + +N ++W
Sbjct: 115 CANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISW 174
Query: 221 TAVISGLAQNELYEDGLRL-------------------------------FAQMRGGSVS 249
TA++SG A++ E+ L L F +MR V
Sbjct: 175 TAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVD 234
Query: 250 PNTLTYLSSLM-ACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQ 308
LSS++ AC+ + A GR++HGL+ LG S + I +AL+D+Y+KC + A
Sbjct: 235 ILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKD 294
Query: 309 IFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEV-DANMVSAVLGVFGVGT 367
IF D VS T ++V AQ+G E+A+ ++ +V+ G++ + V + VG
Sbjct: 295 IFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGF 354
Query: 368 SLPLGKQIHSLIIKKNFSQNPFVSN--GLINMYSKCGELHDSLQVFYEMT-QKNSISWNS 424
+ G+++ + K++ P + + L+++ + G L ++ + + M + +W +
Sbjct: 355 -VEKGRELFQ-SMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAA 412
Query: 425 VIAAFARHGDGSRALQFYEEM 445
+++A R G G ++ + +
Sbjct: 413 LLSACKRQGRGQMGIRIADHL 433
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 142/275 (51%), Gaps = 4/275 (1%)
Query: 74 FDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGF 133
FDS R W +++S Y+K G ++A++LF +PV++ SW ++ISGF+++ F
Sbjct: 163 FDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAF 222
Query: 134 RFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALI 193
F +M R D L++++ AC S R +HGLV GF+ + + NALI
Sbjct: 223 SVFTEMRRERV--DILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALI 280
Query: 194 TSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTL 253
Y KC + +F M R+VV+WT++I G+AQ+ E L L+ M V PN +
Sbjct: 281 DMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEV 340
Query: 254 TYLSSLMACSGVQALAEGRKIHGLLWK-LGMQSDLCIESALMDLYSKCGSLEGAWQIFES 312
T++ + ACS V + +GR++ + K G++ L + L+DL + G L+ A + +
Sbjct: 341 TFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHT 400
Query: 313 AE-ELDGVSLTVILVAFAQNGFEEEAIQIFTRIVT 346
D + +L A + G + I+I +V+
Sbjct: 401 MPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVS 435
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 101/197 (51%), Gaps = 1/197 (0%)
Query: 255 YLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAE 314
YL L C+ + L + +H + KLG+ + + L+++Y KCG+ A Q+F+
Sbjct: 6 YLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMP 65
Query: 315 ELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLG-IEVDANMVSAVLGVFGVGTSLPLGK 373
D ++ +L A Q + + +F+ + + + D + SA++ S+ G+
Sbjct: 66 HRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGR 125
Query: 374 QIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHG 433
Q+H I ++ + V + L++MY+KCG L+ + VF + KN+ISW ++++ +A+ G
Sbjct: 126 QVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSG 185
Query: 434 DGSRALQFYEEMRVGGI 450
AL+ + + V +
Sbjct: 186 RKEEALELFRILPVKNL 202
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 291 bits (745), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 133/382 (34%), Positives = 241/382 (63%), Gaps = 1/382 (0%)
Query: 271 GRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQ 330
G IH ++ + G S + ++++L+ LY+ CG + A+++F+ E D V+ ++ FA+
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 331 NGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFV 390
NG EEA+ ++T + + GI+ D + ++L +L LGK++H +IK ++N
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 126
Query: 391 SNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMR-VGG 449
SN L+++Y++CG + ++ +F EM KNS+SW S+I A +G G A++ ++ M G
Sbjct: 127 SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG 186
Query: 450 IAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEA 509
+ P ++TF+ +L+ACSH G+V++G E+ M ++++ PR EH+ C+VD+L RAG +K+A
Sbjct: 187 LLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKA 246
Query: 510 KNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAE 569
+I+ +P V++W+ LLGAC++HGDS++ +FA Q++ P S +VL++N+Y++E
Sbjct: 247 YEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASE 306
Query: 570 GKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHL 629
+W + K+M GV K G S +E+ +V F++GDK HPQ+D I+ +L + L
Sbjct: 307 QRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRL 366
Query: 630 KDEGYVPDKRCILYYLDQDKKD 651
+ EGYVP + +++++K+
Sbjct: 367 RSEGYVPQISNVYVDVEEEEKE 388
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 157/303 (51%), Gaps = 20/303 (6%)
Query: 173 IHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNEL 232
IH +V GF I V N+L+ Y CG +VFD+M E+++V W +VI+G A+N
Sbjct: 10 IHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGK 69
Query: 233 YEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESA 292
E+ L L+ +M + P+ T +S L AC+ + AL G+++H + K+G+ +L +
Sbjct: 70 PEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNV 129
Query: 293 LMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVT----LG 348
L+DLY++CG +E A +F+ + + VS T ++V A NGF +EAI++F + + L
Sbjct: 130 LLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLP 189
Query: 349 IEVDANMVSAVLGVFGVGTSLPLGKQIHSLI--IKKNFSQNPFVSN--GLINMYSKCGEL 404
E+ +G+ + + K+ +++ + P + + ++++ ++ G++
Sbjct: 190 CEI------TFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQV 243
Query: 405 HDSLQVFYEM-TQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPT---DVTFLSL 460
+ + M Q N + W +++ A HGD L + +++ + P D LS
Sbjct: 244 KKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD--LAEFARIQILQLEPNHSGDYVLLSN 301
Query: 461 LHA 463
++A
Sbjct: 302 MYA 304
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 144/267 (53%), Gaps = 23/267 (8%)
Query: 53 GNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRD 112
++ LG +IH+ +I+ S + ++V NSLL +Y+ CG++ A K+FD+MP +D
Sbjct: 2 ADVRLGETIHSVVIR--------SGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKD 53
Query: 113 TVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRM 172
V+WNS+I+GF N + + +M+ S+ + + D T+ ++LSAC ++ +
Sbjct: 54 LVAWNSVINGFAENGKPEEALALYTEMN-SKGI--KPDGFTIVSLLSACAKIGALTLGKR 110
Query: 173 IHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNEL 232
+H + G R + N L+ Y +CG + + +FDEM+++N V+WT++I GLA N
Sbjct: 111 VHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGF 170
Query: 233 YEDGLRLFAQMRGGS-VSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIES 291
++ + LF M + P +T++ L ACS + EG + + M+ + IE
Sbjct: 171 GKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFE-----YFRRMREEYKIEP 225
Query: 292 ------ALMDLYSKCGSLEGAWQIFES 312
++DL ++ G ++ A++ +S
Sbjct: 226 RIEHFGCMVDLLARAGQVKKAYEYIKS 252
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 91/166 (54%), Gaps = 2/166 (1%)
Query: 371 LGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFA 430
LG+ IHS++I+ F +V N L+++Y+ CG++ + +VF +M +K+ ++WNSVI FA
Sbjct: 6 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 65
Query: 431 RHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRS 490
+G AL Y EM GI P T +SLL AC+ G + G V M + L+
Sbjct: 66 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVG-LTRNL 124
Query: 491 EHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHG 536
++D+ R G ++EAK + + + V W +L+ +++G
Sbjct: 125 HSSNVLLDLYARCGRVEEAKTLFDEMVDKNSV-SWTSLIVGLAVNG 169
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 10/120 (8%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDA 101
+ SLLS C + G L LG +H +IK + SS N LL +Y++CG +++A
Sbjct: 92 IVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSS--------NVLLDLYARCGRVEEA 143
Query: 102 IKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSAC 161
LFD M +++VSW S+I G N FK M + + + T +L AC
Sbjct: 144 KTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLP--CEITFVGILYAC 201
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 288 bits (738), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 190/612 (31%), Positives = 303/612 (49%), Gaps = 85/612 (13%)
Query: 85 WNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRT 144
W +L+ G +DA++LFD MP R+ VSWN++++G +RN D + + F M SR
Sbjct: 141 WTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMP-SRD 199
Query: 145 VYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQ 204
V S A + + DG E + L+F E+ + +++ Y + G +
Sbjct: 200 VVSW--NAMIKGYIEN-DGMEEAK-------LLFGDMSEKNVVTWTSMVYGYCRYGDVRE 249
Query: 205 GRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRG--GSVSPNTLTYLSSLMAC 262
++F EM ERN+V+WTA+ISG A NELY + L LF +M+ +VSPN T +S AC
Sbjct: 250 AYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYAC 309
Query: 263 S--GVQALAEGRKIHGLLWKLGMQS--------------------------------DLC 288
GV+ G ++H + G ++ DL
Sbjct: 310 GGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQ 369
Query: 289 IESALMDLYSKCGSLEGAWQIFESAEEL-------------------------------- 316
+ +++ Y K G LE A +FE + L
Sbjct: 370 SCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDK 429
Query: 317 DGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIH 376
DGV+ TV++ QN EA + + +V G++ + S +L G ++L GK IH
Sbjct: 430 DGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIH 489
Query: 377 SLIIKKNFSQNP--FVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGD 434
+I K +P + N L++MY+KCG + D+ ++F +M QK+++SWNS+I + HG
Sbjct: 490 CVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGL 549
Query: 435 GSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYA 494
+AL ++EM G P VTFL +L ACSH+GL+ +G+E +M + + P +HY
Sbjct: 550 ADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYI 609
Query: 495 CVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIH---GDSE-MGKFAADQLIL 550
++D+LGRAG LKEA+ FI LP V+ ALLG C ++ D+E + + AA +L+
Sbjct: 610 SMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLE 669
Query: 551 AAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDK 610
P ++ HV + N+Y+ G+ K M KGV K G SW+ ++ + + F+ GDK
Sbjct: 670 LDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGDK 729
Query: 611 LHPQADIIFLEL 622
+A + L +
Sbjct: 730 SASEAAQMVLPI 741
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 63/119 (52%), Gaps = 9/119 (7%)
Query: 43 SSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAI 102
S LLS G NL G IH I K + D L + NSL+SMY+KCG ++DA
Sbjct: 470 SVLLSSAGATSNLDQGKHIHCVIAKTTACYDPD------LILQNSLVSMYAKCGAIEDAY 523
Query: 103 KLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSAC 161
++F +M +DTVSWNSMI G + D FK+M +S + + T +LSAC
Sbjct: 524 EIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSG---KKPNSVTFLGVLSAC 579
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 288 bits (737), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 175/660 (26%), Positives = 309/660 (46%), Gaps = 81/660 (12%)
Query: 62 HARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMIS 121
HARI+K S +N ++ L++ YS DA + +P S++S+I
Sbjct: 38 HARILK--------SGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIY 89
Query: 122 GFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGG 181
+ + F F +M + D L + C V + IH + V G
Sbjct: 90 ALTKAKLFTQSIGVFSRMFSHGLIP---DSHVLPNLFKVCAELSAFKVGKQIHCVSCVSG 146
Query: 182 FEREITVGNALITSYFKCGCFCQGRQVFDEM----------------------------- 212
+ + V ++ Y +CG R+VFD M
Sbjct: 147 LDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILS 206
Query: 213 ------IERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQ 266
IE N+V+W ++SG ++ +++ + +F ++ P+ +T S L + +
Sbjct: 207 EMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSE 266
Query: 267 ALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIF---------------- 310
L GR IHG + K G+ D C+ SA++D+Y K G + G +F
Sbjct: 267 MLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYIT 326
Query: 311 -------------------ESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEV 351
E EL+ VS T I+ AQNG + EA+++F + G++
Sbjct: 327 GLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKP 386
Query: 352 DANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVF 411
+ + ++L G +L G+ H ++ + N V + LI+MY+KCG ++ S VF
Sbjct: 387 NHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVF 446
Query: 412 YEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVE 471
M KN + WNS++ F+ HG + +E + + P ++F SLL AC GL +
Sbjct: 447 NMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTD 506
Query: 472 KGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGA 531
+G ++ M+ ++ + PR EHY+C+V++LGRAG L+EA + I+ +P VW ALL +
Sbjct: 507 EGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNS 566
Query: 532 CSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEV 591
C + + ++ + AA++L P + +VL++NIY+A+G W E +M+ G+ K
Sbjct: 567 CRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNP 626
Query: 592 GVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDEGYVPDKRCILYYLDQDKKD 651
G SWI++ +V + + GDK HPQ D I ++ + K ++ G+ P+ L+ +++ +++
Sbjct: 627 GCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQE 686
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 61/124 (49%), Gaps = 11/124 (8%)
Query: 38 NHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGE 97
NH + S+L CG L G S H F+ + + V ++L+ MY+KCG
Sbjct: 387 NHVTIPSMLPACGNIAALGHGRSTHG--------FAVRVHLLDNVHVGSALIDMYAKCGR 438
Query: 98 LQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTM 157
+ + +F+ MP ++ V WNS+++GF + F+ + +R + D + T++
Sbjct: 439 INLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRL---KPDFISFTSL 495
Query: 158 LSAC 161
LSAC
Sbjct: 496 LSAC 499
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 286 bits (733), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 174/612 (28%), Positives = 296/612 (48%), Gaps = 58/612 (9%)
Query: 38 NHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGE 97
N + +SL+ + R+G L L + F+S + L WNS+LS Y+K G
Sbjct: 123 NVSMCNSLIVMYSRNGKLELSRKV------------FNSMKDRNLSSWNSILSSYTKLGY 170
Query: 98 LQDAIKLFDRMPV----RDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKAT 153
+ DAI L D M + D V+WNS++SG+ K+M + + ++
Sbjct: 171 VDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRM---QIAGLKPSTSS 227
Query: 154 LTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMI 213
++++L A P + + IHG + ++ V LI Y K G R VFD M
Sbjct: 228 ISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMD 287
Query: 214 ERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRK 273
+N+V W +++SGL+ L +D L +M + P+ +T+ +LA G
Sbjct: 288 AKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITW----------NSLASG-- 335
Query: 274 IHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEEL----DGVSLTVILVAFA 329
Y+ G E A + +E + VS T I +
Sbjct: 336 -----------------------YATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCS 372
Query: 330 QNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPF 389
+NG A+++F ++ G+ +A +S +L + G + L GK++H ++KN + +
Sbjct: 373 KNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAY 432
Query: 390 VSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGG 449
V+ L++MY K G+L ++++F+ + K+ SWN ++ +A G G + + M G
Sbjct: 433 VATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAG 492
Query: 450 IAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEA 509
+ P +TF S+L C ++GLV++G ++ M + + P EH +C+VD+LGR+G L EA
Sbjct: 493 MEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEA 552
Query: 510 KNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAE 569
+FI+ + +W A L +C IH D E+ + A +L + P +SA +++M N+YS
Sbjct: 553 WDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNL 612
Query: 570 GKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHL 629
+W++ M+ V + SWI+ID+ V F K HP I+ EL +L+ +
Sbjct: 613 NRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEM 672
Query: 630 KDEGYVPDKRCI 641
K GYVPD CI
Sbjct: 673 KKSGYVPDTSCI 684
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 128/535 (23%), Positives = 232/535 (43%), Gaps = 87/535 (16%)
Query: 57 LGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSW 116
LG +IH +IK+ D+S + ++ + Y +C L A KLFD MP RD ++W
Sbjct: 5 LGLTIHGGLIKR----GLDNSDTRVV---SASMGFYGRCVSLGFANKLFDEMPKRDDLAW 57
Query: 117 NSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGL 176
N ++ LR+ +++ F++M S ++ +T+ +L C E + R IHG
Sbjct: 58 NEIVMVNLRSGNWEKAVELFREMQFSG---AKAYDSTMVKLLQVCSNKEGFAEGRQIHGY 114
Query: 177 VFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERN-------------------- 216
V G E +++ N+LI Y + G R+VF+ M +RN
Sbjct: 115 VLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDA 174
Query: 217 ---------------VVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMA 261
+VTW +++SG A L +D + + +M+ + P+T + S L A
Sbjct: 175 IGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQA 234
Query: 262 CSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSL 321
+ L G+ IHG + + + D+ +E+ L+D+Y K G L A +F+ + + V+
Sbjct: 235 VAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAW 294
Query: 322 TVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIK 381
++ + ++A + R+ GI+ DA
Sbjct: 295 NSLVSGLSYACLLKDAEALMIRMEKEGIKPDA---------------------------- 326
Query: 382 KNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQK----NSISWNSVIAAFARHGDGSR 437
N L + Y+ G+ +L V +M +K N +SW ++ + +++G+
Sbjct: 327 -------ITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRN 379
Query: 438 ALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVV 497
AL+ + +M+ G+ P T +LL L+ G E R + + A +V
Sbjct: 380 ALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATA-LV 438
Query: 498 DMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAA 552
DM G++G L+ A G+ +N+ + W +L ++ G E G AA ++L A
Sbjct: 439 DMYGKSGDLQSAIEIFWGI-KNKSLASWNCMLMGYAMFGRGEEG-IAAFSVMLEA 491
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 167/522 (31%), Positives = 265/522 (50%), Gaps = 15/522 (2%)
Query: 88 LLSMYSKCGE---LQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRT 144
L+ + C E L A +F+ + WNSMI G+ + + D F+++M R
Sbjct: 44 LIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEML--RK 101
Query: 145 VYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQ 204
YS D T +L AC G +HG V GFE + V L+ Y CG
Sbjct: 102 GYSP-DYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNY 160
Query: 205 GRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSG 264
G +VF+++ + NVV W ++ISG N + D + F +M+ V N + L+AC
Sbjct: 161 GLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGR 220
Query: 265 VQALAEGRKIHGLLWKLGMQS--------DLCIESALMDLYSKCGSLEGAWQIFESAEEL 316
+ + G+ HG L LG ++ + ++L+D+Y+KCG L A +F+ E
Sbjct: 221 CKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPER 280
Query: 317 DGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIH 376
VS I+ ++QNG EEA+ +F ++ LGI D +V+ + LG+ IH
Sbjct: 281 TLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIH 340
Query: 377 SLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGS 436
+ + K F ++ + L+NMY+K G+ + + F ++ +K++I+W VI A HG G+
Sbjct: 341 AYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGN 400
Query: 437 RALQFYEEMRVGGIA-PTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYAC 495
AL ++ M+ G A P +T+L +L+ACSH GLVE+G + M H L P EHY C
Sbjct: 401 EALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGC 460
Query: 496 VVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPAS 555
+VD+L RAG +EA+ ++ +P V +W ALL C IH + E+ +
Sbjct: 461 MVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELG 520
Query: 556 SAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIE 597
S +VL++NIY+ G+W + + MK K V K +G S +E
Sbjct: 521 SGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVE 562
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 160/309 (51%), Gaps = 21/309 (6%)
Query: 45 LLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKL 104
+L C ++ GS +H ++K F+ + ++V LL MY CGE+ +++
Sbjct: 113 VLKACSGLRDIQFGSCVHGFVVKT----GFEVN----MYVSTCLLHMYMCCGEVNYGLRV 164
Query: 105 FDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGP 164
F+ +P + V+W S+ISGF+ N F F++M + + ++ + +L AC
Sbjct: 165 FEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGV---KANETIMVDLLVACGRC 221
Query: 165 EFSSVSRMIHGLVFVGGFER--------EITVGNALITSYFKCGCFCQGRQVFDEMIERN 216
+ + HG + GF+ + + +LI Y KCG R +FD M ER
Sbjct: 222 KDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERT 281
Query: 217 VVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAE-GRKIH 275
+V+W ++I+G +QN E+ L +F M ++P+ +T+LS + A S +Q ++ G+ IH
Sbjct: 282 LVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRA-SMIQGCSQLGQSIH 340
Query: 276 GLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEE 335
+ K G D I AL+++Y+K G E A + FE E+ D ++ TV+++ A +G
Sbjct: 341 AYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGN 400
Query: 336 EAIQIFTRI 344
EA+ IF R+
Sbjct: 401 EALSIFQRM 409
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/438 (23%), Positives = 190/438 (43%), Gaps = 49/438 (11%)
Query: 173 IHGLVFVGGFEREITVGNALITSYFKCG---CFCQGRQVFDEMIERNVVTWTAVISGLAQ 229
+HGL+ R + + LI C R VF+ + +V W ++I G +
Sbjct: 25 LHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYSN 84
Query: 230 NELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCI 289
+ + L + +M SP+ T+ L ACSG++ + G +HG + K G + ++ +
Sbjct: 85 SPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYV 144
Query: 290 ESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGI 349
+ L+ +Y CG + ++FE + + V+ ++ F N +AI+ F + + G+
Sbjct: 145 STCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGV 204
Query: 350 EVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQ--------NPFVSNGLINMYSKC 401
+ + ++ +L G + GK H + F N ++ LI+MY+KC
Sbjct: 205 KANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKC 264
Query: 402 GELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLL 461
G+L + +F M ++ +SWNS+I ++++GD AL + +M GIAP VTFLS++
Sbjct: 265 GDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVI 324
Query: 462 HACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYAC-VVDMLGRAGLLKEAKNFIEGLPENR 520
A G + G +++ + + C +V+M + G + AK E L E +
Sbjct: 325 RASMIQGCSQLGQSIHAYVSKTGFV--KDAAIVCALVNMYAKTGDAESAKKAFEDL-EKK 381
Query: 521 GVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIK 580
+ W ++ + HG E +
Sbjct: 382 DTIAWTVVIIGLASHGHG----------------------------------NEALSIFQ 407
Query: 581 RMKEKGVAKEVGVSWIEI 598
RM+EKG A G++++ +
Sbjct: 408 RMQEKGNATPDGITYLGV 425
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 142/279 (50%), Gaps = 9/279 (3%)
Query: 38 NHAHLSSLLSVCGRDGNLHLGSSIHARI--IKQPPFFSFDSSRRNALFVWNSLLSMYSKC 95
N + LL CGR ++ G H + + P+F S + + SL+ MY+KC
Sbjct: 207 NETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQ--SKVGFNVILATSLIDMYAKC 264
Query: 96 GELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLT 155
G+L+ A LFD MP R VSWNS+I+G+ +N D + F M + DK T
Sbjct: 265 GDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAP---DKVTFL 321
Query: 156 TMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIER 215
+++ A S + + IH V GF ++ + AL+ Y K G ++ F+++ ++
Sbjct: 322 SVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKK 381
Query: 216 NVVTWTAVISGLAQNELYEDGLRLFAQMR-GGSVSPNTLTYLSSLMACSGVQALAEGRKI 274
+ + WT VI GLA + + L +F +M+ G+ +P+ +TYL L ACS + + EG++
Sbjct: 382 DTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRY 441
Query: 275 HGLLWKL-GMQSDLCIESALMDLYSKCGSLEGAWQIFES 312
+ L G++ + ++D+ S+ G E A ++ ++
Sbjct: 442 FAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKT 480
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 138/294 (46%), Gaps = 14/294 (4%)
Query: 256 LSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCG---SLEGAWQIFES 312
LS L C ++L E ++HGL+ K + ++ S L+D + C +L A +FES
Sbjct: 10 LSQLENC---RSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFES 66
Query: 313 AEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLG 372
+ ++ ++ + ++A+ + ++ G D VL + G
Sbjct: 67 IDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFG 126
Query: 373 KQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARH 432
+H ++K F N +VS L++MY CGE++ L+VF ++ Q N ++W S+I+ F +
Sbjct: 127 SCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNN 186
Query: 433 GDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGM---EFLVSMTRDHRLSPR 489
S A++ + EM+ G+ + + LL AC + G FL + D +
Sbjct: 187 NRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSK 246
Query: 490 SEH----YACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSE 539
++DM + G L+ A+ +G+PE R ++ W +++ S +GD+E
Sbjct: 247 VGFNVILATSLIDMYAKCGDLRTARYLFDGMPE-RTLVSWNSIITGYSQNGDAE 299
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 286 bits (731), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 173/582 (29%), Positives = 297/582 (51%), Gaps = 15/582 (2%)
Query: 55 LHLGSSIHARII-KQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDT 113
L G +IH+ II + P + + SL+ YS+ +++DA+++ + +D
Sbjct: 240 LEFGKTIHSNIIVRGIPL---------NVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDV 290
Query: 114 VSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMI 173
W S++SGF+RN F +M R++ + + T + +LS C + I
Sbjct: 291 FLWTSVVSGFVRNLRAKEAVGTFLEM---RSLGLQPNNFTYSAILSLCSAVRSLDFGKQI 347
Query: 174 HGLVFVGGFEREITVGNALITSYFKCGCF-CQGRQVFDEMIERNVVTWTAVISGLAQNEL 232
H GFE VGNAL+ Y KC + +VF M+ NVV+WT +I GL +
Sbjct: 348 HSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGF 407
Query: 233 YEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESA 292
+D L +M V PN +T L ACS ++ + +IH L + + ++ + ++
Sbjct: 408 VQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNS 467
Query: 293 LMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVD 352
L+D Y+ ++ AW + S + D ++ T ++ F + G E A+ + + GI +D
Sbjct: 468 LVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMD 527
Query: 353 ANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFY 412
+ + +L GK +H +K FS V N L++MYSKCG L D+ +VF
Sbjct: 528 QLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFE 587
Query: 413 EMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEK 472
E+ + +SWN +++ A +G S AL +EEMR+ P VTFL LL ACS+ L +
Sbjct: 588 EIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDL 647
Query: 473 GMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGAC 532
G+E+ M + + + P+ EHY +V +LGRAG L+EA +E + ++++ LL AC
Sbjct: 648 GLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRAC 707
Query: 533 SIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVG 592
G+ +G+ A++ + AP+ A ++L+A++Y GK + M EK ++K++G
Sbjct: 708 RYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLG 767
Query: 593 VSWIEIDKQVSSFVVGDKLH-PQADIIFLELSRLLKHLKDEG 633
S +E+ +V SFV D + + I+ E+ + + +K G
Sbjct: 768 KSTVEVQGKVHSFVSEDVTRVDKTNGIYAEIESIKEEIKRFG 809
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 130/441 (29%), Positives = 216/441 (48%), Gaps = 14/441 (3%)
Query: 45 LLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKL 104
+LS C + + +G IH +IK + D + N+LLS+Y K + +A KL
Sbjct: 30 ILSFCESNSS-RIGLHIHCPVIKFGLLENLD--------LCNNLLSLYLKTDGIWNARKL 80
Query: 105 FDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGP 164
FD M R +W MIS F ++++F + F++M S T + F T ++++ +C G
Sbjct: 81 FDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEF---TFSSVVRSCAGL 137
Query: 165 EFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVI 224
S +HG V GFE VG++L Y KCG F + ++F + + ++WT +I
Sbjct: 138 RDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMI 197
Query: 225 SGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQ 284
S L + + L+ +++M V PN T++ L+ S L G+ IH + G+
Sbjct: 198 SSLVGARKWREALQFYSEMVKAGVPPNEFTFV-KLLGASSFLGLEFGKTIHSNIIVRGIP 256
Query: 285 SDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRI 344
++ ++++L+D YS+ +E A ++ S+ E D T ++ F +N +EA+ F +
Sbjct: 257 LNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEM 316
Query: 345 VTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGEL 404
+LG++ + SA+L + SL GKQIHS IK F + V N L++MY KC
Sbjct: 317 RSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSAS 376
Query: 405 H-DSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHA 463
++ +VF M N +SW ++I HG EM + P VT +L A
Sbjct: 377 EVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRA 436
Query: 464 CSHAGLVEKGMEFLVSMTRDH 484
CS V + +E + R H
Sbjct: 437 CSKLRHVRRVLEIHAYLLRRH 457
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 184/380 (48%), Gaps = 3/380 (0%)
Query: 157 MLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERN 216
+LS C+ S + IH V G + + N L++ Y K R++FDEM R
Sbjct: 30 ILSFCESNS-SRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRT 88
Query: 217 VVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHG 276
V WT +IS +++ + L LF +M PN T+ S + +C+G++ ++ G ++HG
Sbjct: 89 VFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHG 148
Query: 277 LLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEE 336
+ K G + + + S+L DLYSKCG + A ++F S + D +S T+++ + E
Sbjct: 149 SVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWRE 208
Query: 337 AIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLIN 396
A+Q ++ +V G+ + +LG L GK IHS II + N + L++
Sbjct: 209 ALQFYSEMVKAGVPPNEFTFVKLLGASSF-LGLEFGKTIHSNIIVRGIPLNVVLKTSLVD 267
Query: 397 MYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVT 456
YS+ ++ D+++V +++ W SV++ F R+ A+ + EMR G+ P + T
Sbjct: 268 FYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFT 327
Query: 457 FLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGL 516
+ ++L CS ++ G + + S T ++ +VDM + + + + G
Sbjct: 328 YSAILSLCSAVRSLDFGKQ-IHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGA 386
Query: 517 PENRGVLVWQALLGACSIHG 536
+ V+ W L+ HG
Sbjct: 387 MVSPNVVSWTTLILGLVDHG 406
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 196/432 (45%), Gaps = 26/432 (6%)
Query: 38 NHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGE 97
N+ S++LS+C +L G IH++ IK F+ S V N+L+ MY KC
Sbjct: 324 NNFTYSAILSLCSAVRSLDFGKQIHSQTIK----VGFEDSTD----VGNALVDMYMKCSA 375
Query: 98 LQ-DAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTT 156
+ +A ++F M + VSW ++I G + + F +M + + TL+
Sbjct: 376 SEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREV---EPNVVTLSG 432
Query: 157 MLSACDGPEFSSVSRM--IHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIE 214
+L AC + V R+ IH + + E+ VGN+L+ +Y V M
Sbjct: 433 VLRACS--KLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKR 490
Query: 215 RNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKI 274
R+ +T+T++++ + +E L + M G + + L+ + A + + AL G+ +
Sbjct: 491 RDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHL 550
Query: 275 HGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFE 334
H K G + ++L+D+YSKCGSLE A ++FE D VS ++ A NGF
Sbjct: 551 HCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFI 610
Query: 335 EEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSN-- 392
A+ F + E D+ +L G LG + ++KK ++ P V +
Sbjct: 611 SSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQ-VMKKIYNIEPQVEHYV 669
Query: 393 GLINMYSKCGELHDSLQVFYEMTQK-NSISWNSVIAAFARHGDGSRALQFYEEMRVGG-- 449
L+ + + G L ++ V M K N++ + +++ A G+ L E+M G
Sbjct: 670 HLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGN----LSLGEDMANKGLA 725
Query: 450 IAPTDVTFLSLL 461
+AP+D LL
Sbjct: 726 LAPSDPALYILL 737
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 286 bits (731), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 165/522 (31%), Positives = 274/522 (52%), Gaps = 10/522 (1%)
Query: 82 LFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSE 141
++V +L+ Y+KCGEL+ AIK+FD MP RD V+WN+MISGF + F M
Sbjct: 138 MYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRR 197
Query: 142 SRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGC 201
+ +T+ M A + +HG GF ++ V ++ Y K C
Sbjct: 198 IDGLSPNL--STIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKC 255
Query: 202 FCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQM----RGGSVSPNTLTYLS 257
R+VFD ++N VTW+A+I G +NE+ ++ +F QM V+P + +
Sbjct: 256 IIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLI- 314
Query: 258 SLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELD 317
LM C+ L+ GR +H K G DL +++ ++ Y+K GSL A++ F D
Sbjct: 315 -LMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKD 373
Query: 318 GVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHS 377
+S ++ N EE+ ++F + T GI D + VL +L G H
Sbjct: 374 VISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHG 433
Query: 378 LIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSR 437
+ ++ N + N L++MY+KCG+L + +VF M +++ +SWN+++ F HG G
Sbjct: 434 YCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKE 493
Query: 438 ALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTR-DHRLSPRSEHYACV 496
AL + M+ G+ P +VT L++L ACSH+GLV++G + SM+R D + PR +HY C+
Sbjct: 494 ALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCM 553
Query: 497 VDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASS 556
D+L RAG L EA +F+ +P + V LL AC + ++E+G + ++ + ++
Sbjct: 554 TDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKM-QSLGETT 612
Query: 557 APHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEI 598
VL++N YSA +W++ A K++G+ K G SW+++
Sbjct: 613 ESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 192 bits (488), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 140/501 (27%), Positives = 241/501 (48%), Gaps = 23/501 (4%)
Query: 44 SLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIK 103
SLL C R NL LG IH ++K+ S + V +L +Y+ C E++ A
Sbjct: 4 SLLETCIRSRNLVLGQVIHQHLLKRSLTLSSST-------VLVNLTRLYASCNEVELARH 56
Query: 104 LFDRMPVR--DTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSAC 161
+FD +P + ++W+ MI + N + + +M S R K T +L AC
Sbjct: 57 VFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGV---RPTKYTYPFVLKAC 113
Query: 162 DGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWT 221
G ++IH V F ++ V AL+ Y KCG +VFDEM +R++V W
Sbjct: 114 AGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWN 173
Query: 222 AVISGLAQNELYEDGLRLFAQMRG-GSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWK 280
A+ISG + + D + LF MR +SPN T + A AL EG+ +HG +
Sbjct: 174 AMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTR 233
Query: 281 LGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQI 340
+G +DL +++ ++D+Y+K + A ++F+ + + V+ + ++ + +N +EA ++
Sbjct: 234 MGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEV 293
Query: 341 FTRIVTLGIEVDANMVSAV-LGVFGVGTS----LPLGKQIHSLIIKKNFSQNPFVSNGLI 395
F +++ + + MV+ V +G+ +G + L G+ +H +K F + V N +I
Sbjct: 294 FFQML---VNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTII 350
Query: 396 NMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDV 455
+ Y+K G L D+ + F E+ K+ IS+NS+I + + + + EMR GI P
Sbjct: 351 SFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDIT 410
Query: 456 TFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEG 515
T L +L ACSH + G H + + ++DM + G L AK +
Sbjct: 411 TLLGVLTACSHLAALGHGSS-CHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDT 469
Query: 516 LPENRGVLVWQALLGACSIHG 536
+ R ++ W +L IHG
Sbjct: 470 M-HKRDIVSWNTMLFGFGIHG 489
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 285 bits (730), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 167/541 (30%), Positives = 277/541 (51%), Gaps = 12/541 (2%)
Query: 62 HARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMIS 121
H +KQ F N+LF+ N LL Y+K E DA KLFD MP+R+ V+WN +I
Sbjct: 51 HLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIH 110
Query: 122 GFLRNRDFDAGFRF---FKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVF 178
G ++ RD D R F +S D + ++ C +H L+
Sbjct: 111 GVIQ-RDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMV 169
Query: 179 VGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLR 238
G E +L+ Y KCG + R+VF+ +++R++V W A++S N + ++
Sbjct: 170 KQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFG 229
Query: 239 LFAQM--RGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDL 296
L M + T+ S L AC + +G++IH +L+K+ Q D+ + +AL+++
Sbjct: 230 LLKLMGSDKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQFDIPVATALLNM 285
Query: 297 YSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMV 356
Y+K L A + FES + VS ++V FAQNG EA+++F +++ ++ D
Sbjct: 286 YAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTF 345
Query: 357 SAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQ 416
++VL +++ KQ+ +++ KK + V+N LI+ YS+ G L ++L F+ + +
Sbjct: 346 ASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIRE 405
Query: 417 KNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEF 476
+ +SW SVI A A HG +LQ +E M + + P +TFL +L ACSH GLV++G+
Sbjct: 406 PDLVSWTSVIGALASHGFAEESLQMFESM-LQKLQPDKITFLEVLSACSHGGLVQEGLRC 464
Query: 477 LVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHG 536
MT +++ EHY C++D+LGRAG + EA + + +P A G C+IH
Sbjct: 465 FKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHE 524
Query: 537 DSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGV-AKEVGVSW 595
E K+ A +L+ P + +++N Y +EG W + A KR + K G SW
Sbjct: 525 KRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKRERRNCYNPKTPGCSW 584
Query: 596 I 596
+
Sbjct: 585 L 585
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 163/309 (52%), Gaps = 13/309 (4%)
Query: 37 LNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCG 96
L+H L+ +C N+ G +H ++KQ ++ F SL+ Y KCG
Sbjct: 140 LDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQ--------GLESSCFPSTSLVHFYGKCG 191
Query: 97 ELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTT 156
+ +A ++F+ + RD V WN+++S ++ N D F K M + + R D T ++
Sbjct: 192 LIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRF-RGDYFTFSS 250
Query: 157 MLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERN 216
+LSAC + + IH ++F ++ +I V AL+ Y K R+ F+ M+ RN
Sbjct: 251 LLSACRIEQ----GKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRN 306
Query: 217 VVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHG 276
VV+W A+I G AQN + +RLF QM ++ P+ LT+ S L +C+ A+ E +++
Sbjct: 307 VVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQA 366
Query: 277 LLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEE 336
++ K G L + ++L+ YS+ G+L A F S E D VS T ++ A A +GF EE
Sbjct: 367 MVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEE 426
Query: 337 AIQIFTRIV 345
++Q+F ++
Sbjct: 427 SLQMFESML 435
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 285 bits (728), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 178/646 (27%), Positives = 313/646 (48%), Gaps = 71/646 (10%)
Query: 74 FDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGF 133
FD F WN+++ YS L DA KLF PV++T+SWN++ISG+ ++ F
Sbjct: 51 FDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAF 110
Query: 134 RFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALI 193
F +M + ++ TL ++L C IHG GF+ ++ V N L+
Sbjct: 111 NLFWEMQSDGI---KPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLL 167
Query: 194 TSYFKCGCFCQGRQVFDEMI-ERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNT 252
Y +C + +F+ M E+N VTWT++++G +QN + F +R N
Sbjct: 168 AMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQ 227
Query: 253 LTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFES 312
T+ S L AC+ V A G ++H + K G ++++ ++SAL+D+Y+KC +E A + E
Sbjct: 228 YTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEG 287
Query: 313 AEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVG-TSLPL 371
E D VS ++V + G EA+ +F R+ +++D + ++L F + T + +
Sbjct: 288 MEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKI 347
Query: 372 GKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFAR 431
H LI+K ++ V+N L++MY+K G + +L+VF M +K+ ISW +++
Sbjct: 348 ASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTH 407
Query: 432 HGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGME---------FLVSMTR 482
+G AL+ + MRVGGI P + S+L A + L+E G + F S++
Sbjct: 408 NGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSV 467
Query: 483 DHRLSPRSEH---------------------YACVVDMLGRAGLLKEAKNFIEGL----- 516
++ L + C++ + GLL++A+ + + +
Sbjct: 468 NNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYG 527
Query: 517 ----PENRGVL---------------------------VWQALLGACSIHGDSEMGKFAA 545
PE+ + VW+A+L A HG+ E G+ AA
Sbjct: 528 ITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAA 587
Query: 546 DQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSF 605
L+ P ++ P+V ++N+YSA G+ E A + MK + ++KE G SW+E +V SF
Sbjct: 588 KTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSF 647
Query: 606 VVGDKLHPQADIIFLELSRLLKHLKDEGYVPDKRCILYYLDQDKKD 651
+ D+ HP+ I+ ++ ++ +K+ GY D L+ LD++ K+
Sbjct: 648 MSEDRRHPRMVEIYSKVDEMMLLIKEAGYFADMSFALHDLDKEGKE 693
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 186/651 (28%), Positives = 306/651 (47%), Gaps = 54/651 (8%)
Query: 38 NHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSK--C 95
N ++L+ C R LG IH I+K S N++FV NSL+S+Y K
Sbjct: 180 NEYTFVAILTACVRVSRFSLGIQIHGLIVK--------SGFLNSVFVSNSLMSLYDKDSG 231
Query: 96 GELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLT 155
D +KLFD +P RD SWN+++S ++ F F +M +R D TL+
Sbjct: 232 SSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEM--NRVEGFGVDSFTLS 289
Query: 156 TMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNAL----------------------- 192
T+LS+C R +HG G +E++V NAL
Sbjct: 290 TLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQ 349
Query: 193 --------ITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMR 244
IT+Y G ++F + E+N +T+ A+++G +N L+LF M
Sbjct: 350 DAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDML 409
Query: 245 GGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLE 304
V + S++ AC V +IHG K G + CI++AL+D+ ++C +
Sbjct: 410 QRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMA 469
Query: 305 GAWQIFES-AEELDGVSLTV-ILVAFAQNGFEEEAIQIFTRIVT----LGIEVDANMVSA 358
A ++F+ LD T I+ +A+NG ++A+ +F R + EV ++ A
Sbjct: 470 DAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILA 529
Query: 359 VLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKN 418
V G G +G QIH +K + + + N LI+MY+KC + D++++F M + +
Sbjct: 530 VCGTLGFR---EMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHD 586
Query: 419 SISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHA--CSHAGLVEKGMEF 476
ISWNS+I+ + +G AL + M I P +T ++ A + + + +
Sbjct: 587 VISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDL 646
Query: 477 LVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHG 536
+SM + + P +EHY V +LG GLL+EA++ I +P V V +ALL +C IH
Sbjct: 647 FLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHS 706
Query: 537 DSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWI 596
++ + K A ++ P + + ++L +NIYSA G W + M+E+G K SWI
Sbjct: 707 NTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWI 766
Query: 597 EIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDEGYVPDKRCILYYLDQ 647
+ ++ SF D HPQ I+ L L+ GY P+ +L +D+
Sbjct: 767 IHENKIHSFHARDTSHPQEKDIYRGLEILIMECLKVGYEPNTEYVLQEVDE 817
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 116/461 (25%), Positives = 217/461 (47%), Gaps = 45/461 (9%)
Query: 55 LHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTV 114
L L + H + + SF R + N+L+S Y K G ++AI +F + V
Sbjct: 87 LRLSAQYHDVEVTKAVHASFLKLREEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVV 146
Query: 115 SWNSMISGFLR-NRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMI 173
S+ ++ISGF R N + +A + F +M ++ V ++ T +L+AC S+ I
Sbjct: 147 SYTALISGFSRLNLEIEA-LKVFFRMRKAGLVQP--NEYTFVAILTACVRVSRFSLGIQI 203
Query: 174 HGLVFVGGFEREITVGNALITSYFK-CGCFCQG-RQVFDEMIERNVVTWTAVISGLAQNE 231
HGL+ GF + V N+L++ Y K G C ++FDE+ +R+V +W V+S L +
Sbjct: 204 HGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEG 263
Query: 232 LYEDGLRLFAQM---RGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLC 288
LF +M G V TL+ L L +C+ L GR++HG ++G+ +L
Sbjct: 264 KSHKAFDLFYEMNRVEGFGVDSFTLSTL--LSSCTDSSVLLRGRELHGRAIRIGLMQELS 321
Query: 289 IESALMDLYSK-------------------------------CGSLEGAWQIFESAEELD 317
+ +AL+ YSK G ++ A +IF + E +
Sbjct: 322 VNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKN 381
Query: 318 GVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHS 377
++ ++ F +NG +A+++FT ++ G+E+ +++ + G+ + + +QIH
Sbjct: 382 TITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHG 441
Query: 378 LIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVF--YEMTQKNSISWNSVIAAFARHGDG 435
IK + NP + L++M ++C + D+ ++F + +S + S+I +AR+G
Sbjct: 442 FCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLP 501
Query: 436 SRALQ-FYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGME 475
+A+ F+ + + +V+ +L C G E G +
Sbjct: 502 DKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQ 542
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 128/281 (45%), Gaps = 32/281 (11%)
Query: 227 LAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMA----------CSGVQALAEG----- 271
L+ LY RLFA S+SP T+ SS + ++++ +G
Sbjct: 28 LSSLSLYRKPERLFALSASLSLSPATIHECSSSSSSSSSSFDKEETEDIESVIDGFFYLL 87
Query: 272 ------------RKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGV 319
+ +H KL + + +AL+ Y K G A +F S V
Sbjct: 88 RLSAQYHDVEVTKAVHASFLKL-REEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVV 146
Query: 320 SLTVILVAFAQNGFEEEAIQIFTRIVTLG-IEVDANMVSAVLGVFGVGTSLPLGKQIHSL 378
S T ++ F++ E EA+++F R+ G ++ + A+L + LG QIH L
Sbjct: 147 SYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGL 206
Query: 379 IIKKNFSQNPFVSNGLINMYSK--CGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGS 436
I+K F + FVSN L+++Y K D L++F E+ Q++ SWN+V+++ + G
Sbjct: 207 IVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSH 266
Query: 437 RALQ-FYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEF 476
+A FYE RV G T +LL +C+ + ++ +G E
Sbjct: 267 KAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGREL 307
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 37 LNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCG 96
L+ L+ +L+VCG G +G IH +K F + + + NSL+SMY+KC
Sbjct: 519 LDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYF--------SDISLGNSLISMYAKCC 570
Query: 97 ELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTT 156
+ DAIK+F+ M D +SWNS+IS ++ R+ D + +M+E + D TLT
Sbjct: 571 DSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEI---KPDIITLTL 627
Query: 157 MLSA 160
++SA
Sbjct: 628 VISA 631
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 282 bits (721), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 166/524 (31%), Positives = 272/524 (51%), Gaps = 17/524 (3%)
Query: 113 TVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRM 172
+ WN + F ++ M S S D + +L +C +
Sbjct: 18 STPWNVRLRELAYQSLFSESISLYRSMLRSG---SSPDAFSFPFILKSCASLSLPVSGQQ 74
Query: 173 IHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERN--VVTWTAVISGLAQN 230
+H V GG E E V ALI+ Y KCG R+VF+E + + V + A+ISG N
Sbjct: 75 LHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTAN 134
Query: 231 ELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIE 290
D +F +M+ VS +++T L + C+ + L GR +HG K G+ S++ +
Sbjct: 135 SKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVL 194
Query: 291 SALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIE 350
++ + +Y KCGS+E ++F+ ++ ++ ++QNG + ++++ ++ + G+
Sbjct: 195 NSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVC 254
Query: 351 VDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQV 410
D + +VL + +G ++ L+ F N FVSN I+MY++CG L + V
Sbjct: 255 PDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAV 314
Query: 411 FYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLV 470
F M K+ +SW ++I + HG G L +++M GI P F+ +L ACSH+GL
Sbjct: 315 FDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLT 374
Query: 471 EKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLG 530
+KG+E +M R+++L P EHY+C+VD+LGRAG L EA FIE +P VW ALLG
Sbjct: 375 DKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLG 434
Query: 531 ACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYS----AEGKWKERAGAIKRMKEKG 586
AC IH + +M + A ++I P + +VLM+NIYS EG W+ R M+E+
Sbjct: 435 ACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRV----MMRERA 490
Query: 587 VAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLK 630
K+ G S++E +V F+ GD+ H Q + E+ R+L L+
Sbjct: 491 FRKKPGYSYVEHKGRVHLFLAGDRSHEQTE----EVHRMLDELE 530
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 178/356 (50%), Gaps = 7/356 (1%)
Query: 83 FVWNSLLSMYSKCGELQDAIKLFDRMPVRD--TVSWNSMISGFLRNRDFDAGFRFFKQMS 140
FV +L+SMY KCG + DA K+F+ P +V +N++ISG+ N F++M
Sbjct: 89 FVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMK 148
Query: 141 ESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCG 200
E+ D T+ ++ C PE+ + R +HG GG + E+ V N+ IT Y KCG
Sbjct: 149 ETGV---SVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCG 205
Query: 201 CFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLM 260
GR++FDEM + ++TW AVISG +QN L D L L+ QM+ V P+ T +S L
Sbjct: 206 SVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLS 265
Query: 261 ACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVS 320
+C+ + A G ++ L+ G ++ + +A + +Y++CG+L A +F+ VS
Sbjct: 266 SCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVS 325
Query: 321 LTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLII 380
T ++ + +G E + +F ++ GI D + VL G ++ +
Sbjct: 326 WTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMK 385
Query: 381 KK-NFSQNPFVSNGLINMYSKCGELHDSLQVFYEM-TQKNSISWNSVIAAFARHGD 434
++ P + L+++ + G L ++++ M + + W +++ A H +
Sbjct: 386 REYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKN 441
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 145/309 (46%), Gaps = 25/309 (8%)
Query: 19 KSKAPISQYPFPATSES--VLNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDS 76
SK + Y F E+ ++ + L+ +C L LG S+H + +K DS
Sbjct: 134 NSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKG----GLDS 189
Query: 77 SRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFF 136
+ V NS ++MY KCG ++ +LFD MPV+ ++WN++ISG+ +N +
Sbjct: 190 E----VAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELY 245
Query: 137 KQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSY 196
+QM S F TL ++LS+C + + LV GF + V NA I+ Y
Sbjct: 246 EQMKSSGVCPDPF---TLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMY 302
Query: 197 FKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYL 256
+CG + R VFD M +++V+WTA+I + + E GL LF M + P+ ++
Sbjct: 303 ARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFV 362
Query: 257 SSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIE------SALMDLYSKCGSLEGAWQIF 310
L ACS G GL M+ + +E S L+DL + G L+ A +
Sbjct: 363 MVLSACS-----HSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFI 417
Query: 311 ESAE-ELDG 318
ES E DG
Sbjct: 418 ESMPVEPDG 426
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 281 bits (719), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 178/562 (31%), Positives = 294/562 (52%), Gaps = 18/562 (3%)
Query: 57 LGSSIHARIIKQPPFF--------SFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRM 108
L S I A +Q PF + V NSL+SMY+K K+FD M
Sbjct: 49 LPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEM 108
Query: 109 PVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLT-TMLSACDGPEFS 167
RDTVS+ S+I+ ++ + K+M Y K+ L ++L+ C S
Sbjct: 109 LHRDTVSYCSIINSCCQDGLLYEAMKLIKEM----YFYGFIPKSELVASLLALCTRMGSS 164
Query: 168 S-VSRMIHGLVFVGG-FEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVIS 225
S V+RM H LV V + + + AL+ Y K VFD+M +N V+WTA+IS
Sbjct: 165 SKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMIS 224
Query: 226 GLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQ-ALAEGRKIHGLLWKLGMQ 284
G N+ YE G+ LF M+ ++ PN +T LS L AC + + ++IHG ++ G
Sbjct: 225 GCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCH 284
Query: 285 SDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRI 344
+D + +A M +Y +CG++ + +FE+++ D V + ++ +A+ G E + + ++
Sbjct: 285 ADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQM 344
Query: 345 VTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGEL 404
GIE ++ + A++ T L +HS I+K F + + N LI+MY+KCG L
Sbjct: 345 RKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSL 404
Query: 405 HDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHAC 464
+ +VFYE+T+K+ +SW+S+I A+ HG GS AL+ ++ M GG D+ FL++L AC
Sbjct: 405 SAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSAC 464
Query: 465 SHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLV 524
+HAGLVE+ + H + EHYAC +++LGR G + +A +P +
Sbjct: 465 NHAGLVEEAQTIFTQAGKYH-MPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARI 523
Query: 525 WQALLGACSIHGDSEM-GKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMK 583
W +LL AC HG ++ GK A++L+ + P + A +VL++ I++ G + + M+
Sbjct: 524 WSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQ 583
Query: 584 EKGVAKEVGVSWIEIDKQVSSF 605
+ + K G S IE + Q+ +
Sbjct: 584 RRKLNKCYGFSKIEPELQIEDY 605
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/443 (28%), Positives = 217/443 (48%), Gaps = 25/443 (5%)
Query: 27 YPFPATSESVLNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWN 86
Y F SE V +SLL++C R G+ SS AR+ D + ++ +
Sbjct: 142 YGFIPKSELV------ASLLALCTRMGS----SSKVARMFH--ALVLVDERMQESVLLST 189
Query: 87 SLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVY 146
+L+ MY K + A +FD+M V++ VSW +MISG + N++++ G F+ M
Sbjct: 190 ALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENL-- 247
Query: 147 SRFDKATLTTMLSACDGPEF-SSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQG 205
R ++ TL ++L AC + SS+ + IHG F G + + A +T Y +CG
Sbjct: 248 -RPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLS 306
Query: 206 RQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGV 265
R +F+ R+VV W+++ISG A+ + + L QMR + N++T L+ + AC+
Sbjct: 307 RVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNS 366
Query: 266 QALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVIL 325
L+ +H + K G S + + +AL+D+Y+KCGSL A ++F E D VS + ++
Sbjct: 367 TLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMI 426
Query: 326 VAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFS 385
A+ +G EA++IF ++ G EVD A L + L ++ ++ +
Sbjct: 427 NAYGLHGHGSEALEIFKGMIKGGHEVDD---MAFLAILSACNHAGLVEEAQTIFTQAGKY 483
Query: 386 QNPFVSNG---LINMYSKCGELHDSLQVFYEMTQKNSIS-WNSVIAAFARHG--DGSRAL 439
P IN+ + G++ D+ +V M K S W+S+++A HG D + +
Sbjct: 484 HMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKI 543
Query: 440 QFYEEMRVGGIAPTDVTFLSLLH 462
E M+ P + LS +H
Sbjct: 544 IANELMKSEPDNPANYVLLSKIH 566
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 98/434 (22%), Positives = 196/434 (45%), Gaps = 16/434 (3%)
Query: 111 RDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACD-GPEFSSV 169
R + + + G + ++ +D R +K + ++ + A L +++ AC E +
Sbjct: 8 RLNLELGNKLKGLVSDQFYDEALRLYKL--KIHSLGTNGFTAILPSVIKACAFQQEPFLL 65
Query: 170 SRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQ 229
+H L G + + V N+LI+ Y K R+VFDEM+ R+ V++ ++I+ Q
Sbjct: 66 GAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQ 125
Query: 230 NELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAE-GRKIHGL-LWKLGMQSDL 287
+ L + ++L +M P + S L C+ + + ++ R H L L MQ +
Sbjct: 126 DGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESV 185
Query: 288 CIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTL 347
+ +AL+D+Y K A+ +F+ E + VS T ++ N E + +F +
Sbjct: 186 LLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRE 245
Query: 348 GIEVD-ANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHD 406
+ + ++S + + L K+IH + + ++ + MY +CG +
Sbjct: 246 NLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSL 305
Query: 407 SLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSH 466
S +F ++ + W+S+I+ +A GD S + +MR GI VT L+++ AC++
Sbjct: 306 SRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTN 365
Query: 467 AGLVEKG----MEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGV 522
+ L+ + L H L + ++DM + G L A+ L E + +
Sbjct: 366 STLLSFASTVHSQILKCGFMSHILLGNA-----LIDMYAKCGSLSAAREVFYELTE-KDL 419
Query: 523 LVWQALLGACSIHG 536
+ W +++ A +HG
Sbjct: 420 VSWSSMINAYGLHG 433
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 4/220 (1%)
Query: 325 LVAFAQNGFEEEAIQIFT-RIVTLGIEVDANMVSAVLGVFGVGTS-LPLGKQIHSLIIKK 382
L + F +EA++++ +I +LG ++ +V+ LG Q+H L +K
Sbjct: 17 LKGLVSDQFYDEALRLYKLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKA 76
Query: 383 NFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFY 442
+ VSN LI+MY+K + +VF EM ++++S+ S+I + + G A++
Sbjct: 77 GADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLI 136
Query: 443 EEMRVGGIAPTDVTFLSLLHACSHAGLVEK-GMEFLVSMTRDHRLSPRSEHYACVVDMLG 501
+EM G P SLL C+ G K F + D R+ +VDM
Sbjct: 137 KEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYL 196
Query: 502 RAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMG 541
+ A + + + E + + W A++ C + + EMG
Sbjct: 197 KFDDHAAAFHVFDQM-EVKNEVSWTAMISGCVANQNYEMG 235
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 186/599 (31%), Positives = 314/599 (52%), Gaps = 24/599 (4%)
Query: 44 SLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIK 103
S++ C G L + S+H +I ++ F D + + NSLL+MYSKCG+L + +
Sbjct: 207 SVVEGCAELGCLRIARSVHGQITRK--MFDLDET------LCNSLLTMYSKCGDLLSSER 258
Query: 104 LFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDG 163
+F+++ ++ VSW +MIS + R + R F +M +S + TL ++LS+C
Sbjct: 259 IFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGI---EPNLVTLYSVLSSCGL 315
Query: 164 PEFSSVSRMIHGLVFVGGFEREI-----TVGNALITSYFKCGCFCQGRQVFDEMIERNVV 218
+ +HG RE+ ++ AL+ Y +CG V + +RN+V
Sbjct: 316 IGLIREGKSVHGF----AVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIV 371
Query: 219 TWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLL 278
W ++IS A + L LF QM + P+ T SS+ AC + G++IHG +
Sbjct: 372 AWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHV 431
Query: 279 WKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAI 338
+ + SD ++++L+D+YSK GS++ A +F + V+ +L F+QNG EAI
Sbjct: 432 IRTDV-SDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAI 490
Query: 339 QIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMY 398
+F + +E++ AV+ SL GK +H +I ++ F LI+MY
Sbjct: 491 SLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL-KDLFTDTALIDMY 549
Query: 399 SKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFL 458
+KCG+L+ + VF M+ ++ +SW+S+I A+ HG A+ + +M G P +V F+
Sbjct: 550 AKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFM 609
Query: 459 SLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPE 518
++L AC H+G VE+G ++ ++ + +SP SEH+AC +D+L R+G LKEA I+ +P
Sbjct: 610 NVLSACGHSGSVEEG-KYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPF 668
Query: 519 NRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGA 578
VW +L+ C IH ++ K + L + + L++NIY+ EG+W+E
Sbjct: 669 LADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRL 728
Query: 579 IKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDEGYVPD 637
MK + K G S IEID++V F G++ Q D I+ L L++L +E +V D
Sbjct: 729 RSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGN-LQNLTNEEHVVD 786
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 170/636 (26%), Positives = 297/636 (46%), Gaps = 83/636 (13%)
Query: 24 ISQYPFPATSESVLNHAHLSSLLSVC-GRDGNLHLGSSIHARIIKQPPFFSFDSSRRNAL 82
IS++ FP S+L C G +L +G +H RIIK +
Sbjct: 98 ISKFVFP-------------SVLRACAGSREHLSVGGKVHGRIIK--------GGVDDDA 136
Query: 83 FVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSES 142
+ SLL MY + G L DA K+FD MPVRD V+W++++S L N + R FK M +
Sbjct: 137 VIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDD 196
Query: 143 RTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCF 202
D T+ +++ C ++R +HG + F+ + T+ N+L+T Y KCG
Sbjct: 197 GV---EPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDL 253
Query: 203 CQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMAC 262
++F+++ ++N V+WTA+IS + E E LR F++M + PN +T S L +C
Sbjct: 254 LSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSC 313
Query: 263 SGVQALAEGRKIHGLLWKLGMQSDL-CIESALMDLYSKCGSLEGAWQIFESAEELDGVSL 321
+ + EG+ +HG + + + + AL++LY++CG L + + + V+
Sbjct: 314 GLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAW 373
Query: 322 TVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIK 381
++ +A G +A+ +F ++VT I+ DA +++ + +PLGKQIH +I+
Sbjct: 374 NSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIR 433
Query: 382 KNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQF 441
+ S + FV N LI+MYSK G + + VF ++ ++ ++WNS++ F+++G+ A+
Sbjct: 434 TDVS-DEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISL 492
Query: 442 YEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGM----EFLVSMTRDHRLSPRSEHYACVV 497
++ M + +VTFL+++ ACS G +EKG + ++S +D ++
Sbjct: 493 FDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFTD------TALI 546
Query: 498 DMLGRAGLLKEAKNFIEGLPE--------------------------NRGV--------L 523
DM + G L A+ + N+ V +
Sbjct: 547 DMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEV 606
Query: 524 VWQALLGACSIHGDSEMGKFAADQLILAAPASSAPH-VLMANIYSAEGKWKERAGAIKRM 582
V+ +L AC G E GK+ + + + ++ H ++ S G KE IK M
Sbjct: 607 VFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEM 666
Query: 583 KEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADII 618
A G S V G ++H + DII
Sbjct: 667 PFLADASVWG-----------SLVNGCRIHQKMDII 691
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 127/489 (25%), Positives = 238/489 (48%), Gaps = 19/489 (3%)
Query: 54 NLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDT 113
+L L S +HA ++ RR+ L V L+ Y+ G + +F+ P D+
Sbjct: 13 SLRLVSQLHAHLLVTGRL------RRDPLPV-TKLIESYAFMGSPDSSRLVFEAFPYPDS 65
Query: 114 VSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGP-EFSSVSRM 172
+ +I + DA + ++ T S+F ++L AC G E SV
Sbjct: 66 FMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKF---VFPSVLRACAGSREHLSVGGK 122
Query: 173 IHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNEL 232
+HG + GG + + + +L+ Y + G +VFD M R++V W+ ++S +N
Sbjct: 123 VHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGE 182
Query: 233 YEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESA 292
LR+F M V P+ +T +S + C+ + L R +HG + + D + ++
Sbjct: 183 VVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNS 242
Query: 293 LMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVD 352
L+ +YSKCG L + +IFE + + VS T ++ ++ + F E+A++ F+ ++ GIE +
Sbjct: 243 LLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPN 302
Query: 353 ANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQN-PFVSNGLINMYSKCGELHDSLQVF 411
+ +VL G+ + GK +H +++ N +S L+ +Y++CG+L D V
Sbjct: 303 LVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVL 362
Query: 412 YEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVE 471
++ +N ++WNS+I+ +A G +AL + +M I P T S + AC +AGLV
Sbjct: 363 RVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVP 422
Query: 472 KGMEFLVSMTRDHRLSPRSEHYA--CVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALL 529
G + + R + S+ + ++DM ++G + A + ++R V+ W ++L
Sbjct: 423 LGKQIHGHVIR----TDVSDEFVQNSLIDMYSKSGSVDSASTVFNQI-KHRSVVTWNSML 477
Query: 530 GACSIHGDS 538
S +G+S
Sbjct: 478 CGFSQNGNS 486
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 280 bits (715), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 183/660 (27%), Positives = 323/660 (48%), Gaps = 49/660 (7%)
Query: 16 DSLKSKAPISQYPFPATSESVLNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFD 75
D+ K+ + + A S+ ++ H+ +SLLS C G +HA I +
Sbjct: 21 DAFKTFSLLRLQSSSAVSDDLVLHS-AASLLSACVDVRAFLAGVQVHAHCISSGVEY--- 76
Query: 76 SSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRF 135
+++ V L++ YS +A + + + + WN +I+ + +N F+
Sbjct: 77 ----HSVLV-PKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAA 131
Query: 136 FKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITS 195
+K+M R D T ++L AC + R++HG + V ++ + V NALI+
Sbjct: 132 YKRMVSKGI---RPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISM 188
Query: 196 YFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLF--------------- 240
Y + R++FD M ER+ V+W AVI+ A ++ + LF
Sbjct: 189 YKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITW 248
Query: 241 --------------------AQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWK 280
++MR S + + + L ACS + A+ G++IHGL
Sbjct: 249 NIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIH 308
Query: 281 LGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQI 340
+ + L+ +YSKC L A +F EE + I+ +AQ EEA +
Sbjct: 309 SSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHL 368
Query: 341 FTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIK-KNFSQNPFVSNGLINMYS 399
++ G + ++ ++++L + +L GK+ H I++ K F + N L+++Y+
Sbjct: 369 LREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYA 428
Query: 400 KCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLS 459
K G++ + QV M++++ +++ S+I + G+G AL ++EM GI P VT ++
Sbjct: 429 KSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVA 488
Query: 460 LLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPEN 519
+L ACSH+ LV +G + M ++ + P +H++C+VD+ GRAG L +AK+ I +P
Sbjct: 489 VLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYK 548
Query: 520 RGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAI 579
W LL AC IHG++++GK+AA++L+ P + +VL+AN+Y+A G W + A
Sbjct: 549 PSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVR 608
Query: 580 KRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDE-GYVPDK 638
M++ GV K+ G +WI+ D S F VGD P+A + L L + +KD GY +K
Sbjct: 609 TIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGLNQLMKDNAGYAINK 668
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 157/477 (32%), Positives = 264/477 (55%), Gaps = 37/477 (7%)
Query: 208 VFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQA 267
+F + I+ ++ +TA I+ + N L + L+ Q+ ++PN T+ S L +CS
Sbjct: 86 LFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCS---- 141
Query: 268 LAEGRKIHGLLWKLGMQSDLCIESALMDLYSK---------------------------C 300
G+ IH + K G+ D + + L+D+Y+K C
Sbjct: 142 TKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITC 201
Query: 301 ----GSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLG-IEVDANM 355
G++E A +F+S E D VS V++ +AQ+GF +A+ +F +++ G + D
Sbjct: 202 YAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEIT 261
Query: 356 VSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMT 415
V A L +L G+ IH + N V GLI+MYSKCG L +++ VF +
Sbjct: 262 VVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTP 321
Query: 416 QKNSISWNSVIAAFARHGDGSRALQFYEEMR-VGGIAPTDVTFLSLLHACSHAGLVEKGM 474
+K+ ++WN++IA +A HG AL+ + EM+ + G+ PTD+TF+ L AC+HAGLV +G+
Sbjct: 322 RKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGI 381
Query: 475 EFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSI 534
SM +++ + P+ EHY C+V +LGRAG LK A I+ + + ++W ++LG+C +
Sbjct: 382 RIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKL 441
Query: 535 HGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVS 594
HGD +GK A+ LI +S +VL++NIY++ G ++ A MKEKG+ KE G+S
Sbjct: 442 HGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGIS 501
Query: 595 WIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDEGYVPDKRCILYYLDQDKKD 651
IEI+ +V F GD+ H ++ I+ L ++ + +K GYVP+ +L L++ +K+
Sbjct: 502 TIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKE 558
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 155/347 (44%), Gaps = 41/347 (11%)
Query: 74 FDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNR-DFDAG 132
FD +L ++++ Y+K G ++ A LFD M RD VSWN MI G+ ++ DA
Sbjct: 184 FDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDAL 243
Query: 133 FRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNAL 192
F K ++E + + D+ T+ LSAC R IH V + V L
Sbjct: 244 MLFQKLLAEGK---PKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGL 300
Query: 193 ITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRG-GSVSPN 251
I Y KCG + VF++ +++V W A+I+G A + +D LRLF +M+G + P
Sbjct: 301 IDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPT 360
Query: 252 TLTYLSSLMACSGVQALAEGRKI-HGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIF 310
+T++ +L AC+ + EG +I + + G++ + L+ L + G L+ A++
Sbjct: 361 DITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYET- 419
Query: 311 ESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLP 370
I + ++ D+ + S+VLG +
Sbjct: 420 ---------------------------------IKNMNMDADSVLWSSVLGSCKLHGDFV 446
Query: 371 LGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQK 417
LGK+I +I N +N + L N+Y+ G+ +V M +K
Sbjct: 447 LGKEIAEYLIGLNI-KNSGIYVLLSNIYASVGDYEGVAKVRNLMKEK 492
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 126/275 (45%), Gaps = 38/275 (13%)
Query: 297 YSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMV 356
Y+ G + + +F + D T + + NG +++A ++ ++++ I +
Sbjct: 74 YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTF 133
Query: 357 SAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMT- 415
S++L S GK IH+ ++K +P+V+ GL+++Y+K G++ + +VF M
Sbjct: 134 SSLLK----SCSTKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPE 189
Query: 416 ------------------------------QKNSISWNSVIAAFARHGDGSRALQFYEEM 445
+++ +SWN +I +A+HG + AL ++++
Sbjct: 190 RSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKL 249
Query: 446 RV-GGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAG 504
G P ++T ++ L ACS G +E G ++ + R+ + ++DM + G
Sbjct: 250 LAEGKPKPDEITVVAALSACSQIGALETG-RWIHVFVKSSRIRLNVKVCTGLIDMYSKCG 308
Query: 505 LLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSE 539
L+EA P + ++ W A++ ++HG S+
Sbjct: 309 SLEEAVLVFNDTPR-KDIVAWNAMIAGYAMHGYSQ 342
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 166/540 (30%), Positives = 281/540 (52%), Gaps = 4/540 (0%)
Query: 84 VWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESR 143
V NS+L++Y KC + DA LFD+M RD VSWN+MISG+ + + +M R
Sbjct: 181 VMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRM---R 237
Query: 144 TVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFC 203
R D+ T LS + RM+H + GF+ ++ + ALIT Y KCG
Sbjct: 238 GDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEE 297
Query: 204 QGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACS 263
+V + + ++VV WT +ISGL + E L +F++M ++ S + +C+
Sbjct: 298 ASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCA 357
Query: 264 GVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTV 323
+ + G +HG + + G D ++L+ +Y+KCG L+ + IFE E D VS
Sbjct: 358 QLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNA 417
Query: 324 ILVAFAQNGFEEEAIQIFTRIVTLGIE-VDANMVSAVLGVFGVGTSLPLGKQIHSLIIKK 382
I+ +AQN +A+ +F + ++ VD+ V ++L +LP+GK IH ++I+
Sbjct: 418 IISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRS 477
Query: 383 NFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFY 442
V L++MYSKCG L + + F ++ K+ +SW +IA + HG G AL+ Y
Sbjct: 478 FIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIY 537
Query: 443 EEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGR 502
E G+ P V FL++L +CSH G+V++G++ SM RD + P EH ACVVD+L R
Sbjct: 538 SEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCR 597
Query: 503 AGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLM 562
A +++A F + + V +L AC +G +E+ + +I P + +V +
Sbjct: 598 AKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKL 657
Query: 563 ANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLEL 622
+ ++A +W + + + +M+ G+ K G S IE++ + ++F + H + L+L
Sbjct: 658 GHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSHSDDTVSLLKL 717
Score = 221 bits (564), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 148/544 (27%), Positives = 266/544 (48%), Gaps = 21/544 (3%)
Query: 1 MKSGRKFNTHLPSWVDSLKSKAPISQYPFPATSESVLNHAHLSSLLSVCGRDGNLHLGSS 60
+ S + FN+H+ K +S + ++ + + SLL C L G S
Sbjct: 8 LNSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLS 67
Query: 61 IHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMI 120
IH +++ FS D ++ +SL+++Y+K G L A K+F+ M RD V W +MI
Sbjct: 68 IHQQVLVNG--FSSD------FYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMI 119
Query: 121 SGFLRNRDFDAGFRFFKQMSESRTVYSRFD--KATLTTMLSACDGPEFSSVSRMIHGLVF 178
+ R +M RF K T+L G + + +H
Sbjct: 120 GCYSRAGIVGEACSLVNEM--------RFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAV 171
Query: 179 VGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLR 238
+ GF+ +I V N+++ Y KC + +FD+M +R++V+W +ISG A + L+
Sbjct: 172 IYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILK 231
Query: 239 LFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYS 298
L +MRG + P+ T+ +SL + L GR +H + K G D+ +++AL+ +Y
Sbjct: 232 LLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYL 291
Query: 299 KCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSA 358
KCG E ++++ E+ D V TV++ + G E+A+ +F+ ++ G ++ + +++
Sbjct: 292 KCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIAS 351
Query: 359 VLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKN 418
V+ S LG +H +++ ++ + N LI MY+KCG L SL +F M +++
Sbjct: 352 VVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERD 411
Query: 419 SISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTD-VTFLSLLHACSHAGLVEKGMEFL 477
+SWN++I+ +A++ D +AL +EEM+ + D T +SLL ACS AG + G
Sbjct: 412 LVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIH 471
Query: 478 VSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGD 537
+ R + P S +VDM + G L+ A+ + + + V+ W L+ HG
Sbjct: 472 CIVIRSF-IRPCSLVDTALVDMYSKCGYLEAAQRCFDSISW-KDVVSWGILIAGYGFHGK 529
Query: 538 SEMG 541
++
Sbjct: 530 GDIA 533
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 276 bits (705), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 160/574 (27%), Positives = 291/574 (50%), Gaps = 15/574 (2%)
Query: 59 SSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNS 118
+ IHA +I + S R+ L++ + GE+ A K+FD +P R +NS
Sbjct: 34 TQIHAFVISTGNLLNGSSISRD-------LIASCGRIGEISYARKVFDELPQRGVSVYNS 86
Query: 119 MISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVF 178
MI + R ++ D R + QM + + D +T T + AC +
Sbjct: 87 MIVVYSRGKNPDEVLRLYDQMIAEKI---QPDSSTFTMTIKACLSGLVLEKGEAVWCKAV 143
Query: 179 VGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLR 238
G++ ++ V ++++ Y KCG + +F +M +R+V+ WT +++G AQ +
Sbjct: 144 DFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVE 203
Query: 239 LFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYS 298
+ +M+ + + L L A + GR +HG L++ G+ ++ +E++L+D+Y+
Sbjct: 204 FYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYA 263
Query: 299 KCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSA 358
K G +E A ++F VS ++ FAQNG +A + + +LG + D +
Sbjct: 264 KVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVG 323
Query: 359 VLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKN 418
VL SL G+ +H I+K++ + + L++MYSKCG L S ++F + +K+
Sbjct: 324 VLVACSQVGSLKTGRLVHCYILKRHV-LDRVTATALMDMYSKCGALSSSREIFEHVGRKD 382
Query: 419 SISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLV 478
+ WN++I+ + HG+G + + +M I P TF SLL A SH+GLVE+G +
Sbjct: 383 LVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFS 442
Query: 479 SMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDS 538
M +++ P +HY C++D+L RAG ++EA + I + + +W ALL C H +
Sbjct: 443 VMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNL 502
Query: 539 EMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEI 598
+G AA++++ P S L++N ++ KWKE A K M+ + K G S IE+
Sbjct: 503 SVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEV 562
Query: 599 DKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDE 632
+ ++ +F++ D H + + ++L++LK E
Sbjct: 563 NGELRTFLMEDLSHHE----HYHMLQVLRNLKTE 592
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 12/119 (10%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDA 101
L +L C + G+L G +H I+K+ ++ +L+ MYSKCG L +
Sbjct: 321 LVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVTAT---------ALMDMYSKCGALSSS 371
Query: 102 IKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSA 160
++F+ + +D V WN+MIS + + + F +M+ES D AT ++LSA
Sbjct: 372 REIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNI---EPDHATFASLLSA 427
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 276 bits (705), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 181/633 (28%), Positives = 315/633 (49%), Gaps = 49/633 (7%)
Query: 38 NHAHLSSLLSVCGR-DGNLHL--GSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSK 94
N+A ++++L VC D N+ G IH+ ++++ S + +FV NSL+S Y +
Sbjct: 223 NYATIANVLPVCASMDKNIACRSGRQIHSYVVQR-------SWLQTHVFVCNSLVSFYLR 275
Query: 95 CGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATL 154
G +++A LF RM +D VSWN +I+G+ N ++ F+ F + V D T+
Sbjct: 276 VGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSP--DSVTI 333
Query: 155 TTMLSACDGPEFSSVSRMIHGLVFVGGFEREIT-VGNALITSYFKCGCFCQGRQVFDEMI 213
++L C + + IH + + E T VGNALI+ Y + G F M
Sbjct: 334 ISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMS 393
Query: 214 ERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRK 273
+++++W A++ A + L L + +++ +++T LS L C VQ + + ++
Sbjct: 394 TKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKE 453
Query: 274 IHGLLWKLGMQSD---LCIESALMDLYSKCGSLEGAWQIF-------------------- 310
+HG K G+ D + +AL+D Y+KCG++E A +IF
Sbjct: 454 VHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYV 513
Query: 311 -----ESAEEL-------DGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSA 358
+ A+ L D + ++++ +A++ EAI +F I G+ + +
Sbjct: 514 NSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMN 573
Query: 359 VLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKN 418
+L V SL L +Q H II+ + + L+++Y+KCG L + VF +++
Sbjct: 574 LLPVCAQLASLHLVRQCHGYIIRGGLG-DIRLKGTLLDVYAKCGSLKHAYSVFQSDARRD 632
Query: 419 SISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLV 478
+ + +++A +A HG G AL Y M I P V ++L AC HAGL++ G++
Sbjct: 633 LVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYD 692
Query: 479 SMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDS 538
S+ H + P E YAC VD++ R G L +A +F+ +P +W LL AC+ +
Sbjct: 693 SIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRM 752
Query: 539 EMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEI 598
++G A+ L+ A + HVL++N+Y+A+ KW+ MK+K + K G SW+E+
Sbjct: 753 DLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEV 812
Query: 599 DKQVSSFVVGDKLHPQADIIFLELSRLLKHLKD 631
D Q + FV GD HP+ D IF ++ L +K+
Sbjct: 813 DGQRNVFVSGDCSHPRRDSIFDLVNALYLQMKE 845
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 145/564 (25%), Positives = 255/564 (45%), Gaps = 33/564 (5%)
Query: 38 NHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGE 97
+H ++ C +L G ++H + K + S+ S+L+MY+KC
Sbjct: 20 DHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSK--------SVLNMYAKCRR 71
Query: 98 LQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTM 157
+ D K+F +M D V WN +++G + + RFFK M + + T +
Sbjct: 72 MDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGRET-MRFFKAMHFADE--PKPSSVTFAIV 128
Query: 158 LSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCG-CFCQGRQVFDEMIERN 216
L C S + +H + G E++ VGNAL++ Y K G F FD + +++
Sbjct: 129 LPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKD 188
Query: 217 VVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQ---ALAEGRK 273
VV+W A+I+G ++N + D R F M PN T + L C+ + A GR+
Sbjct: 189 VVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQ 248
Query: 274 IHG-LLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNG 332
IH ++ + +Q+ + + ++L+ Y + G +E A +F D VS V++ +A N
Sbjct: 249 IHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNC 308
Query: 333 FEEEAIQIFTRIVTLG-IEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNF-SQNPFV 390
+A Q+F +V G + D+ + ++L V T L GK+IHS I++ ++ ++ V
Sbjct: 309 EWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSV 368
Query: 391 SNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVG-- 448
N LI+ Y++ G+ + F M+ K+ ISWN+++ AFA D + QF +
Sbjct: 369 GNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFA---DSPKQFQFLNLLHHLLN 425
Query: 449 -GIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHY--ACVVDMLGRAGL 505
I VT LSLL C + + K E + L E ++D + G
Sbjct: 426 EAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGN 485
Query: 506 LKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASS--APHVLMA 563
++ A GL E R ++ + +LL G G Q++ +++ LM
Sbjct: 486 VEYAHKIFLGLSERRTLVSYNSLLS-----GYVNSGSHDDAQMLFTEMSTTDLTTWSLMV 540
Query: 564 NIYSAEGKWKERAGAIKRMKEKGV 587
IY+ E G + ++ +G+
Sbjct: 541 RIYAESCCPNEAIGVFREIQARGM 564
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 177/580 (30%), Positives = 293/580 (50%), Gaps = 83/580 (14%)
Query: 74 FDSSRRNALFVWNSLLSMYSK-CGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAG 132
F R WNSLL SK + +A +LFD +P DT S+N M+S ++RN +F+
Sbjct: 84 FHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKA 143
Query: 133 FRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNAL 192
F FD+ ++ N +
Sbjct: 144 QSF-------------FDRMPF-----------------------------KDAASWNTM 161
Query: 193 ITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNT 252
IT Y + G + R++F M+E+N V+W A+ISG + E F V+P
Sbjct: 162 ITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFF------KVAP-- 213
Query: 253 LTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFES 312
GV A W +A++ Y K +E A +F+
Sbjct: 214 ---------VRGVVA-----------W-----------TAMITGYMKAKKVELAEAMFKD 242
Query: 313 AE-ELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPL 371
+ V+ ++ + +N E+ +++F ++ GI +++ +S+ L ++L L
Sbjct: 243 MTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQL 302
Query: 372 GKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFAR 431
G+QIH ++ K + LI+MY KCGEL D+ ++F M +K+ ++WN++I+ +A+
Sbjct: 303 GRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQ 362
Query: 432 HGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSE 491
HG+ +AL + EM I P +TF+++L AC+HAGLV GM + SM RD+++ P+ +
Sbjct: 363 HGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPD 422
Query: 492 HYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILA 551
HY C+VD+LGRAG L+EA I +P V+ LLGAC +H + E+ +FAA++L+
Sbjct: 423 HYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQL 482
Query: 552 APASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKL 611
++A +V +ANIY+++ +W++ A KRMKE V K G SWIEI +V F D++
Sbjct: 483 NSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRI 542
Query: 612 HPQADIIFLELSRLLKHLKDEGYVPDKRCILYYLDQDKKD 651
HP+ D I +L L K +K GY P+ L+ +++++K+
Sbjct: 543 HPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKE 582
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 183/404 (45%), Gaps = 78/404 (19%)
Query: 77 SRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNS------------------ 118
S ++ +F N +++ + G++ A+++F M ++T++WNS
Sbjct: 56 SDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQL 115
Query: 119 --------------MISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLS--ACD 162
M+S ++RN +F+ FF +M D A+ TM++ A
Sbjct: 116 FDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK-------DAASWNTMITGYARR 168
Query: 163 GP------------EFSSVS--RMIHGLVFVGGFE-----------REITVGNALITSYF 197
G E + VS MI G + G E R + A+IT Y
Sbjct: 169 GEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYM 228
Query: 198 KCGCFCQGRQVFDEM-IERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYL 256
K +F +M + +N+VTW A+ISG +N EDGL+LF M + PN+
Sbjct: 229 KAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLS 288
Query: 257 SSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEEL 316
S+L+ CS + AL GR+IH ++ K + +D+ ++L+ +Y KCG L AW++FE ++
Sbjct: 289 SALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKK 348
Query: 317 DGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVL------GVFGVGTSLP 370
D V+ ++ +AQ+G ++A+ +F ++ I D AVL G+ +G +
Sbjct: 349 DVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAY- 407
Query: 371 LGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEM 414
S++ P ++++ + G+L ++L++ M
Sbjct: 408 ----FESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSM 447
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 44/225 (19%)
Query: 38 NHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGE 97
N + LSS L C L LG IH + K S+ N + SL+SMY KCGE
Sbjct: 283 NSSGLSSALLGCSELSALQLGRQIHQIVSK--------STLCNDVTALTSLISMYCKCGE 334
Query: 98 LQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTM 157
L DA KLF+ M +D V+WN+MISG+ ++ + D F++M +++ R D T +
Sbjct: 335 LGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKI---RPDWITFVAV 391
Query: 158 LSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNV 217
L AC+ GLV +G +YF+ V D +E
Sbjct: 392 LLACNHA----------GLVNIG-------------MAYFES-------MVRDYKVEPQP 421
Query: 218 VTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMAC 262
+T ++ L + E+ L+L +R P+ + + L AC
Sbjct: 422 DHYTCMVDLLGRAGKLEEALKL---IRSMPFRPHAAVFGTLLGAC 463
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 171/566 (30%), Positives = 280/566 (49%), Gaps = 41/566 (7%)
Query: 42 LSSLLSVCG-RDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQD 100
LS++LS+ R+G L + KQ + L + NSLL +Y+K ++
Sbjct: 243 LSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNG 302
Query: 101 AIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSA 160
A +F MP + VSWN MI GF + D F +M +S + ++ T ++L A
Sbjct: 303 AELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGF---QPNEVTCISVLGA 359
Query: 161 CDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTW 220
C F+ G GR++F + + +V W
Sbjct: 360 C-----------------------------------FRSGDVETGRRIFSSIPQPSVSAW 384
Query: 221 TAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWK 280
A++SG + E YE+ + F QM+ ++ P+ T L +C+ ++ L G++IHG++ +
Sbjct: 385 NAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIR 444
Query: 281 LGMQSDLCIESALMDLYSKCGSLEGAWQIFESA-EELDGVSLTVILVAFAQNGFEEEAIQ 339
+ + I S L+ +YS+C +E + IF+ ELD ++ F N + +A+
Sbjct: 445 TEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALI 504
Query: 340 IFTRIVTLGIEV-DANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMY 398
+F R+ + + + VL SL G+Q H L++K + + FV L +MY
Sbjct: 505 LFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMY 564
Query: 399 SKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFL 458
KCGE+ + Q F + +KN++ WN +I + +G G A+ Y +M G P +TF+
Sbjct: 565 CKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFV 624
Query: 459 SLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPE 518
S+L ACSH+GLVE G+E L SM R H + P +HY C+VD LGRAG L++A+ E P
Sbjct: 625 SVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPY 684
Query: 519 NRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGA 578
++W+ LL +C +HGD + + A++L+ P SSA +VL++N YS+ +W + A
Sbjct: 685 KSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAAL 744
Query: 579 IKRMKEKGVAKEVGVSWIEIDKQVSS 604
M + V K G SW + S
Sbjct: 745 QGLMNKNRVHKTPGQSWTTYGNDLDS 770
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 199/414 (48%), Gaps = 50/414 (12%)
Query: 74 FDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGF 133
FD ++ WN+ L+ K G+L +A ++FD MP RD VSWN+MIS +R +
Sbjct: 64 FDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKAL 123
Query: 134 RFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALI 193
+K+M + SRF TL ++LSAC HG+ G ++ I VGNAL+
Sbjct: 124 VVYKRMVCDGFLPSRF---TLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALL 180
Query: 194 TSYFKCGCFCQ-GRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNT 252
+ Y KCG G +VF+ + + N V++TAVI GLA+ + +++F M V ++
Sbjct: 181 SMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDS 240
Query: 253 LTYLSSLMACS----GVQALAE------GRKIHGLLWKLGMQSDLCIESALMDLYSKCGS 302
+ LS++++ S G +L+E G++IH L +LG DL + ++L+++Y+K
Sbjct: 241 VC-LSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKD 299
Query: 303 LEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGV 362
+ GA IF E++ VS +++V F Q +++++ TR+ G + + +VLG
Sbjct: 300 MNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGA 359
Query: 363 FGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISW 422
+ G++ ++F + Q + +W
Sbjct: 360 C-----------------------------------FRSGDVETGRRIFSSIPQPSVSAW 384
Query: 423 NSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEF 476
N++++ ++ + A+ + +M+ + P T +L +C+ +E G +
Sbjct: 385 NAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQI 438
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 160/307 (52%), Gaps = 10/307 (3%)
Query: 184 REITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQM 243
R++ NA +T K G + +VFD M ER+VV+W +IS L + E L ++ +M
Sbjct: 70 RDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRM 129
Query: 244 RGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSL 303
P+ T S L ACS V G + HG+ K G+ ++ + +AL+ +Y+KCG +
Sbjct: 130 VCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFI 189
Query: 304 -EGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGV 362
+ ++FES + + VS T ++ A+ EA+Q+F + G++VD+ +S +L +
Sbjct: 190 VDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSI 249
Query: 363 FGVGTSL---------PLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYE 413
LGKQIH L ++ F + ++N L+ +Y+K +++ + +F E
Sbjct: 250 SAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAE 309
Query: 414 MTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKG 473
M + N +SWN +I F + ++++F MR G P +VT +S+L AC +G VE G
Sbjct: 310 MPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETG 369
Query: 474 MEFLVSM 480
S+
Sbjct: 370 RRIFSSI 376
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 111/240 (46%), Gaps = 33/240 (13%)
Query: 255 YLSSLMAC-SGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKC------------- 300
YL+SL+ C + G+ IHG + ++GM+SD + + L+DLY +C
Sbjct: 8 YLASLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEM 67
Query: 301 ------------------GSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFT 342
G L A ++F+ E D VS ++ + GFEE+A+ ++
Sbjct: 68 SVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYK 127
Query: 343 RIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCG 402
R+V G +++VL G + H + +K +N FV N L++MY+KCG
Sbjct: 128 RMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCG 187
Query: 403 ELHD-SLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLL 461
+ D ++VF ++Q N +S+ +VI AR A+Q + M G+ V ++L
Sbjct: 188 FIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNIL 247
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 75/166 (45%), Gaps = 18/166 (10%)
Query: 18 LKSKAPISQYPFPATSESVLNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSS 77
L +KA I T+ N +++LS C R +L G H ++K + DS
Sbjct: 498 LDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSG--YVSDS- 554
Query: 78 RRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFK 137
FV +L MY KCGE+ A + FD + ++TV WN MI G+ N D ++
Sbjct: 555 -----FVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYR 609
Query: 138 QMSESRTVYSRFDKATLTTMLSACD-------GPEFSSVSRMIHGL 176
+M S + D T ++L+AC G E S + IHG+
Sbjct: 610 KMISSG---EKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGI 652
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 31/125 (24%)
Query: 372 GKQIHSLIIKKNFSQNPFVSNGLINMYSKC------------------------------ 401
GK IH I++ + ++ N L+++Y +C
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 402 -GELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSL 460
G+L ++ +VF M +++ +SWN++I+ R G +AL Y+ M G P+ T S+
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 461 LHACS 465
L ACS
Sbjct: 145 LSACS 149
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 274 bits (700), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 172/561 (30%), Positives = 295/561 (52%), Gaps = 18/561 (3%)
Query: 44 SLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIK 103
+LL++ + L+ +HA++I F+ + + + +SL + Y + L A
Sbjct: 9 ALLTILSQAKTLNHTQQVHAKVI----IHGFE----DEVVLGSSLTNAYIQSNRLDFATS 60
Query: 104 LFDRMPV--RDTVSWNSMISGFLRNRD--FDAGFRFFKQMSESRTVYSRFDKATLTTMLS 159
F+R+P R+ SWN+++SG+ +++ + + +M R D L +
Sbjct: 61 SFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRM---RRHCDGVDSFNLVFAIK 117
Query: 160 ACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVT 219
AC G +IHGL G +++ V +L+ Y + G ++VFDE+ RN V
Sbjct: 118 ACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVL 177
Query: 220 WTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLW 279
W ++ G + + RLF MR ++ + LT + + AC V A G+ +HG+
Sbjct: 178 WGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSI 237
Query: 280 KLGM--QSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEA 337
+ QSD ++++++D+Y KC L+ A ++FE++ + + V T ++ FA+ EA
Sbjct: 238 RRSFIDQSDY-LQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEA 296
Query: 338 IQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINM 397
+F +++ I + ++A+L SL GK +H +I+ + I+M
Sbjct: 297 FDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDM 356
Query: 398 YSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTF 457
Y++CG + + VF M ++N ISW+S+I AF +G AL + +M+ + P VTF
Sbjct: 357 YARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTF 416
Query: 458 LSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLP 517
+SLL ACSH+G V++G + SMTRD+ + P EHYAC+VD+LGRAG + EAK+FI+ +P
Sbjct: 417 VSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMP 476
Query: 518 ENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAG 577
W ALL AC IH + ++ A++L+ P S+ +VL++NIY+ G W+
Sbjct: 477 VKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNC 536
Query: 578 AIKRMKEKGVAKEVGVSWIEI 598
++M KG K VG S E+
Sbjct: 537 VRRKMGIKGYRKHVGQSATEV 557
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 12/129 (9%)
Query: 34 ESVL-NHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMY 92
ES+L N L+++L C G+L G S+H +I+ D+ + S + MY
Sbjct: 306 ESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNG--IEMDAVN------FTSFIDMY 357
Query: 93 SKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKA 152
++CG +Q A +FD MP R+ +SW+SMI+ F N F+ F +M V +
Sbjct: 358 ARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVP---NSV 414
Query: 153 TLTTMLSAC 161
T ++LSAC
Sbjct: 415 TFVSLLSAC 423
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 177/596 (29%), Positives = 307/596 (51%), Gaps = 54/596 (9%)
Query: 38 NHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGE 97
N LL C + G++ G +HA+++K F +F +L+SMY K +
Sbjct: 30 NKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVD--------VFTATALVSMYMKVKQ 81
Query: 98 LQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTM 157
+ DA+K+ D MP R S N+ +SG L N FR F ++R S + T+ ++
Sbjct: 82 VTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMF---GDARVSGSGMNSVTVASV 138
Query: 158 LSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNV 217
L C E +H L GFE E+ VG +L++ Y +CG + ++F+++ ++V
Sbjct: 139 LGGCGDIEGG---MQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSV 195
Query: 218 VTWTAVISGLAQNELYEDGLRLFAQMRG-GSVSPNTLTYLSSLMACSGVQALAEGRKIHG 276
VT+ A ISGL +N + +F MR S PN +T+++++ AC+ + L GR++HG
Sbjct: 196 VTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHG 255
Query: 277 LLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIF-------------------------E 311
L+ K Q + + +AL+D+YSKC + A+ +F E
Sbjct: 256 LVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHE 315
Query: 312 SAEEL-----------DGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVL 360
+A EL D + ++ F+Q G EA + F R++++ + ++++L
Sbjct: 316 TAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLL 375
Query: 361 GVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVF--YEMTQKN 418
+L GK+IH +IK ++ FV LI+MY KCG + ++F +E K+
Sbjct: 376 SACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKD 435
Query: 419 SISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLV 478
+ WN +I+ + +HG+ A++ +E +R + P+ TF ++L ACSH G VEKG +
Sbjct: 436 PVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFR 495
Query: 479 SMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDS 538
M ++ P +EH C++D+LGR+G L+EAK I+ + E + +LLG+C H D
Sbjct: 496 LMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDP 554
Query: 539 EMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVS 594
+G+ AA +L P + AP V++++IY+A +W++ + + +K + K G+S
Sbjct: 555 VLGEEAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 122/464 (26%), Positives = 217/464 (46%), Gaps = 57/464 (12%)
Query: 32 TSESVLNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSM 91
S S +N ++S+L CG ++ G +H +K S ++V SL+SM
Sbjct: 125 VSGSGMNSVTVASVLGGCG---DIEGGMQLHCLAMK--------SGFEMEVYVGTSLVSM 173
Query: 92 YSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDK 151
YS+CGE A ++F+++P + V++N+ ISG + N + F M + + +
Sbjct: 174 YSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSS--EEPND 231
Query: 152 ATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDE 211
T ++AC R +HGLV F+ E VG ALI Y KC C+ VF E
Sbjct: 232 VTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTE 291
Query: 212 MIE-RNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTY--------------- 255
+ + RN+++W +VISG+ N +E + LF ++ + P++ T+
Sbjct: 292 LKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIE 351
Query: 256 -------------------LSSLM-ACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMD 295
L+SL+ ACS + L G++IHG + K + D+ + ++L+D
Sbjct: 352 AFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLID 411
Query: 296 LYSKCGSLEGAWQIFESAE--ELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDA 353
+Y KCG A +IF+ E D V V++ + ++G E AI+IF + +E
Sbjct: 412 MYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSL 471
Query: 354 NMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSN--GLINMYSKCGELHDSLQVF 411
+AVL ++ G QI L +++ + P + +I++ + G L ++ +V
Sbjct: 472 ATFTAVLSACSHCGNVEKGSQIFRL-MQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVI 530
Query: 412 YEMTQKNSISWNSVIAAFARHGD---GSRALQFYEEMRVGGIAP 452
+M++ +S ++S++ + +H D G A E+ AP
Sbjct: 531 DQMSEPSSSVYSSLLGSCRQHLDPVLGEEAAMKLAELEPENPAP 574
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 139/294 (47%), Gaps = 5/294 (1%)
Query: 247 SVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGA 306
S SPN T+ L +C+ + + +GR +H + K G D+ +AL+ +Y K + A
Sbjct: 26 SHSPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDA 85
Query: 307 WQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVG 366
++ + E S+ + +NGF +A ++F G +++ V++VLG G G
Sbjct: 86 LKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLG--GCG 143
Query: 367 TSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVI 426
+ G Q+H L +K F +V L++MYS+CGE + ++F ++ K+ +++N+ I
Sbjct: 144 -DIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFI 202
Query: 427 AAFARHGDGSRALQFYEEMR-VGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHR 485
+ +G + + MR P DVTF++ + AC+ ++ G + L +
Sbjct: 203 SGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQ-LHGLVMKKE 261
Query: 486 LSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSE 539
+ ++DM + K A L + R ++ W +++ I+G E
Sbjct: 262 FQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHE 315
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 273 bits (697), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 158/495 (31%), Positives = 255/495 (51%), Gaps = 52/495 (10%)
Query: 207 QVFDEMIERNVVTWTAVISGLAQNELYED----GLRLFAQMRGGS-VSPNTLTYLSSLMA 261
++F++M +RN +W +I G ++++ ED + LF +M V PN T+ S L A
Sbjct: 80 KIFNQMPQRNCFSWNTIIRGFSESD--EDKALIAITLFYEMMSDEFVEPNRFTFPSVLKA 137
Query: 262 CSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGA--------------- 306
C+ + EG++IHGL K G D + S L+ +Y CG ++ A
Sbjct: 138 CAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVV 197
Query: 307 -------------WQI-----------------FESAEELDGVSLTVILVAFAQNGFEEE 336
W + F+ + VS ++ ++ NGF ++
Sbjct: 198 MTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKD 257
Query: 337 AIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLIN 396
A+++F + I + + +VL SL LG+ +H + + + LI+
Sbjct: 258 AVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALID 317
Query: 397 MYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVT 456
MYSKCG + ++ VF + ++N I+W+++I FA HG A+ + +MR G+ P+DV
Sbjct: 318 MYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVA 377
Query: 457 FLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGL 516
+++LL ACSH GLVE+G + M L PR EHY C+VD+LGR+GLL EA+ FI +
Sbjct: 378 YINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNM 437
Query: 517 PENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERA 576
P ++W+ALLGAC + G+ EMGK A+ L+ P S +V ++N+Y+++G W E +
Sbjct: 438 PIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVS 497
Query: 577 GAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDEGYVP 636
RMKEK + K+ G S I+ID + FVV D HP+A I L + L+ GY P
Sbjct: 498 EMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRP 557
Query: 637 DKRCILYYLDQDKKD 651
+L L+++ K+
Sbjct: 558 ITTQVLLNLEEEDKE 572
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 178/402 (44%), Gaps = 56/402 (13%)
Query: 97 ELQDAIKLFDRMPVRDTVSWNSMISGFL---RNRDFDAGFRFFKQMSESRTVYSRFDKAT 153
+L A K+F++MP R+ SWN++I GF ++ A F++ MS+ +RF T
Sbjct: 74 DLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRF---T 130
Query: 154 LTTMLSACDGPEFSSVSRMIHGLVFVGGF------------------------------- 182
++L AC + IHGL GF
Sbjct: 131 FPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNI 190
Query: 183 --------------EREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLA 228
+ EI + N +I Y + G R +FD+M +R+VV+W +ISG +
Sbjct: 191 IEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYS 250
Query: 229 QNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLC 288
N ++D + +F +M+ G + PN +T +S L A S + +L G +H G++ D
Sbjct: 251 LNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDV 310
Query: 289 IESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLG 348
+ SAL+D+YSKCG +E A +FE + ++ + ++ FA +G +AI F ++ G
Sbjct: 311 LGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAG 370
Query: 349 IEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNG-LINMYSKCGELHDS 407
+ +L G + G++ S ++ + + G ++++ + G L ++
Sbjct: 371 VRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEA 430
Query: 408 LQVFYEMTQK-NSISWNSVIAAFARHGD---GSRALQFYEEM 445
+ M K + + W +++ A G+ G R +M
Sbjct: 431 EEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDM 472
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/415 (23%), Positives = 178/415 (42%), Gaps = 56/415 (13%)
Query: 62 HARIIKQPPFFSFDSSRRNA-LFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMI 120
+ II++ D +R+ + +WN ++ Y + G+ + A LFD+M R VSWN+MI
Sbjct: 187 YKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMI 246
Query: 121 SGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVG 180
SG+ N F F++M + R + TL ++L A + +H
Sbjct: 247 SGYSLNGFFKDAVEVFREMKKGDI---RPNYVTLVSVLPAISRLGSLELGEWLHLYAEDS 303
Query: 181 GFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLF 240
G + +G+ALI Y KCG + VF+ + NV+TW+A+I+G A + D + F
Sbjct: 304 GIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCF 363
Query: 241 AQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKL-GMQSDLCIESALMDLYSK 299
+MR V P+ + Y++ L ACS + EGR+ + + G++ + ++DL +
Sbjct: 364 CKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGR 423
Query: 300 CGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAV 359
G + + AEE I+ + I+ D + A+
Sbjct: 424 SG-------LLDEAEEF---------------------------ILNMPIKPDDVIWKAL 449
Query: 360 LGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNS 419
LG + ++ +GK++ ++++ + L NMY+ G + ++ M +K+
Sbjct: 450 LGACRMQGNVEMGKRVANILMDM-VPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDI 508
Query: 420 --------ISWNSVIAAFARHGD--------GSRALQFYEEMRVGGIAPTDVTFL 458
I + V+ F D S ++ +++R+ G P L
Sbjct: 509 RKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVL 563
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 146/331 (44%), Gaps = 61/331 (18%)
Query: 262 CSGVQALAEGRKIHGLLWKLGMQSDLCIESALM------DLYSKCGSLEGAWQIFESAEE 315
C ++ L++ IH + K G D + ++ DL+ + L+ A +IF +
Sbjct: 33 CRTIRDLSQ---IHAVFIKSGQMRDTLAAAEILRFCATSDLHHR--DLDYAHKIFNQMPQ 87
Query: 316 LDGVSLTVILVAFAQNGFEEE--AIQIFTRIVTLG-IEVDANMVSAVLGVFGVGTSLPLG 372
+ S I+ F+++ ++ AI +F +++ +E + +VL + G
Sbjct: 88 RNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEG 147
Query: 373 KQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFY-------------------- 412
KQIH L +K F + FV + L+ MY CG + D+ +FY
Sbjct: 148 KQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGE 207
Query: 413 -------------------------EMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRV 447
+M Q++ +SWN++I+ ++ +G A++ + EM+
Sbjct: 208 IVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKK 267
Query: 448 GGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLK 507
G I P VT +S+L A S G +E G E+L D + + ++DM + G+++
Sbjct: 268 GDIRPNYVTLVSVLPAISRLGSLELG-EWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIE 326
Query: 508 EAKNFIEGLPENRGVLVWQALLGACSIHGDS 538
+A + E LP V+ W A++ +IHG +
Sbjct: 327 KAIHVFERLPRE-NVITWSAMINGFAIHGQA 356
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 273 bits (697), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 154/493 (31%), Positives = 264/493 (53%), Gaps = 5/493 (1%)
Query: 163 GPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTA 222
GP + + +H + V G+ R ++ LIT +F + + + +
Sbjct: 19 GPRVKQLQQ-VHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNS 77
Query: 223 VISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLG 282
VI ++ L + + +M +VSP+ T+ S + +C+ + AL G+ +H G
Sbjct: 78 VIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSG 137
Query: 283 MQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFT 342
D +++AL+ YSKCG +EGA Q+F+ E V+ ++ F QNG +EAIQ+F
Sbjct: 138 FGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFY 197
Query: 343 RIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCG 402
++ G E D+ ++L ++ LG +H II + N + LIN+YS+CG
Sbjct: 198 QMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCG 257
Query: 403 ELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVG-GIAPTDVTFLSLL 461
++ + +VF +M + N +W ++I+A+ HG G +A++ + +M G P +VTF+++L
Sbjct: 258 DVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVL 317
Query: 462 HACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLP---E 518
AC+HAGLVE+G MT+ +RL P EH+ C+VDMLGRAG L EA FI L +
Sbjct: 318 SACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGK 377
Query: 519 NRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGA 578
+W A+LGAC +H + ++G A +LI P + HV+++NIY+ GK E +
Sbjct: 378 ATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHI 437
Query: 579 IKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDEGYVPDK 638
M + K+VG S IE++ + F +GD+ H + I+ L L+ K+ GY P
Sbjct: 438 RDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEIGYAPVS 497
Query: 639 RCILYYLDQDKKD 651
+++ +++++K+
Sbjct: 498 EEVMHQVEEEEKE 510
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 143/274 (52%), Gaps = 23/274 (8%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDA 101
+S++ C L +G +H + F D+ +V +L++ YSKCG+++ A
Sbjct: 110 FTSVIKSCADLSALRIGKGVHCHAVVSG--FGLDT------YVQAALVTFYSKCGDMEGA 161
Query: 102 IKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSAC 161
++FDRMP + V+WNS++SGF +N D + F QM ES D AT ++LSAC
Sbjct: 162 RQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGF---EPDSATFVSLLSAC 218
Query: 162 DGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWT 221
S+ +H + G + + +G ALI Y +CG + R+VFD+M E NV WT
Sbjct: 219 AQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWT 278
Query: 222 AVISGLAQNELYEDGLRLFAQMRG--GSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLW 279
A+IS + + + LF +M G + PN +T+++ L AC+ + EGR ++ +
Sbjct: 279 AMISAYGTHGYGQQAVELFNKMEDDCGPI-PNNVTFVAVLSACAHAGLVEEGRSVYKRMT 337
Query: 280 K-----LGMQSDLCIESALMDLYSKCGSLEGAWQ 308
K G++ +C ++D+ + G L+ A++
Sbjct: 338 KSYRLIPGVEHHVC----MVDMLGRAGFLDEAYK 367
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 173/336 (51%), Gaps = 11/336 (3%)
Query: 104 LFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDG 163
LF +P+ D +NS+I + R ++++M S S + T T+++ +C
Sbjct: 63 LFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNY---TFTSVIKSCAD 119
Query: 164 PEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAV 223
+ + +H V GF + V AL+T Y KCG RQVFD M E+++V W ++
Sbjct: 120 LSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSL 179
Query: 224 ISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGM 283
+SG QN L ++ +++F QMR P++ T++S L AC+ A++ G +H + G+
Sbjct: 180 VSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGL 239
Query: 284 QSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTR 343
++ + +AL++LYS+CG + A ++F+ +E + + T ++ A+ +G+ ++A+++F +
Sbjct: 240 DLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNK 299
Query: 344 IVTLGIEVDANMV-SAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNG--LINMYSK 400
+ + N+ AVL + G+ ++ + K++ P V + +++M +
Sbjct: 300 MEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKR-MTKSYRLIPGVEHHVCMVDMLGR 358
Query: 401 CGELHDSLQVFYEMTQKNSIS----WNSVIAAFARH 432
G L ++ + +++ + W +++ A H
Sbjct: 359 AGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMH 394
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 272 bits (695), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 160/545 (29%), Positives = 274/545 (50%), Gaps = 41/545 (7%)
Query: 86 NSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTV 145
+S++ Y K G + DA LFDRM R+ ++W +MI G+ + F+ GF F +M + V
Sbjct: 212 SSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDV 271
Query: 146 YSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQG 205
+ + TL M AC IHGLV E ++ +GN+L++ Y K G +
Sbjct: 272 --KVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEA 329
Query: 206 RQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGV 265
+ VF M ++ V+W ++I+GL Q + + LF +M G
Sbjct: 330 KAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPG-------------------- 369
Query: 266 QALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVIL 325
D+ + ++ +S G + ++F E D ++ T ++
Sbjct: 370 -------------------KDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMI 410
Query: 326 VAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFS 385
AF NG+ EEA+ F +++ + ++ S+VL L G QIH ++K N
Sbjct: 411 SAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIV 470
Query: 386 QNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEM 445
+ V N L++MY KCG +D+ ++F +++ N +S+N++I+ ++ +G G +AL+ + +
Sbjct: 471 NDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSML 530
Query: 446 RVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGL 505
G P VTFL+LL AC H G V+ G ++ SM + + P +HYAC+VD+LGR+GL
Sbjct: 531 ESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGL 590
Query: 506 LKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANI 565
L +A N I +P VW +LL A H ++ + AA +LI P S+ P+V+++ +
Sbjct: 591 LDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQL 650
Query: 566 YSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRL 625
YS GK ++ + K K + K+ G SWI + +V +F+ GD+ + I L +
Sbjct: 651 YSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEIGFTLKMI 710
Query: 626 LKHLK 630
K ++
Sbjct: 711 RKEME 715
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 132/484 (27%), Positives = 209/484 (43%), Gaps = 102/484 (21%)
Query: 47 SVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFD 106
++C R N L S H I ++ F ++ A+F NS +S +++ G LQ+A +F
Sbjct: 16 NICLR-CNSTLAVSNHEPITQKTRNFLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFR 74
Query: 107 RMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSA------ 160
+M R VSW +MIS + N ++ F +M T A +T M+
Sbjct: 75 QMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSY---NAMITAMIKNKCDLGK 131
Query: 161 -----CDGPEFSSVS--RMIHGLVFVGGFE-------------REITVGNALITSYFKCG 200
CD PE ++VS MI G V G F+ R+ N L++ Y + G
Sbjct: 132 AYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAG 191
Query: 201 -------------------C------FCQ------GRQVFDEMIERNVVTWTAVISGLAQ 229
C +C+ R +FD M ERNV+TWTA+I G +
Sbjct: 192 KWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFK 251
Query: 230 NELYEDGLRLFAQMRG-GSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLC 288
+EDG LF +MR G V N+ T AC EG +IHGL+ ++ ++ DL
Sbjct: 252 AGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLF 311
Query: 289 IESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLG 348
+ ++LM +YSK G + A +F + D VS ++ Q EA ++F +
Sbjct: 312 LGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEK----- 366
Query: 349 IEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSL 408
+P GK + S +I +S GE+ +
Sbjct: 367 --------------------MP-GKDMVSW-------------TDMIKGFSGKGEISKCV 392
Query: 409 QVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHA-CSHA 467
++F M +K++I+W ++I+AF +G AL ++ +M + P TF S+L A S A
Sbjct: 393 ELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLA 452
Query: 468 GLVE 471
L+E
Sbjct: 453 DLIE 456
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 57/124 (45%), Gaps = 11/124 (8%)
Query: 38 NHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGE 97
N SS+LS +L G IH R++K N L V NSL+SMY KCG
Sbjct: 437 NSYTFSSVLSATASLADLIEGLQIHGRVVKMNIV--------NDLSVQNSLVSMYCKCGN 488
Query: 98 LQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTM 157
DA K+F + + VS+N+MISG+ N + F + S + T +
Sbjct: 489 TNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSG---KEPNGVTFLAL 545
Query: 158 LSAC 161
LSAC
Sbjct: 546 LSAC 549
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 271 bits (693), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 173/523 (33%), Positives = 268/523 (51%), Gaps = 11/523 (2%)
Query: 119 MISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVF 178
M GF++N F ++ + + KA L LS F++ ++H L
Sbjct: 1 MKKGFIQNVHLAPATSLFVPQYKNDFFHLK-TKAFLVHKLSESTNAAFTN---LLHTLTL 56
Query: 179 VGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLR 238
GF + N L+ SY K R++FDEM E NVV+WT+VISG ++ L
Sbjct: 57 KLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALS 116
Query: 239 LFAQMRGGS-VSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLY 297
+F +M V PN T+ S ACS + G+ IH L G++ ++ + S+L+D+Y
Sbjct: 117 MFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMY 176
Query: 298 SKCGSLEGAWQIFES--AEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDAN- 354
KC +E A ++F+S + VS T ++ A+AQN EAI++F AN
Sbjct: 177 GKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQ 236
Query: 355 -MVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYE 413
M+++V+ L GK H L+ + + N V+ L++MY+KCG L + ++F
Sbjct: 237 FMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLR 296
Query: 414 MTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKG 473
+ + IS+ S+I A A+HG G A++ ++EM G I P VT L +LHACSH+GLV +G
Sbjct: 297 IRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEG 356
Query: 474 MEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLP--ENRGVLVWQALLGA 531
+E+L M + + P S HY CVVDMLGR G + EA + + +G L+W ALL A
Sbjct: 357 LEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSA 416
Query: 532 CSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEV 591
+HG E+ A+ +LI + ++ ++ ++N Y+ G W++ MK G KE
Sbjct: 417 GRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKER 476
Query: 592 GVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDEGY 634
SWIE V F GD ++ I L L K +K+ G+
Sbjct: 477 ACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKERGH 519
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 147/285 (51%), Gaps = 9/285 (3%)
Query: 83 FVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSES 142
F N L+ Y K E+ A KLFD M + VSW S+ISG+ F++M E
Sbjct: 65 FTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHED 124
Query: 143 RTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCF 202
R V ++ T ++ AC S + + IH + + G R I V ++L+ Y KC
Sbjct: 125 RPVPP--NEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDV 182
Query: 203 CQGRQVFDEMI--ERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVS--PNTLTYLSS 258
R+VFD MI RNVV+WT++I+ AQN + + LF S N S
Sbjct: 183 ETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASV 242
Query: 259 LMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDG 318
+ ACS + L G+ HGL+ + G +S+ + ++L+D+Y+KCGSL A +IF
Sbjct: 243 ISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSV 302
Query: 319 VSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVF 363
+S T +++A A++G E A+++F +V ++ N V+ +LGV
Sbjct: 303 ISYTSMIMAKAKHGLGEAAVKLFDEMV--AGRINPNYVT-LLGVL 344
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 142/280 (50%), Gaps = 12/280 (4%)
Query: 38 NHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGE 97
N +S+ C +G +IHAR+ RRN + V +SL+ MY KC +
Sbjct: 130 NEYTFASVFKACSALAESRIGKNIHARL-------EISGLRRN-IVVSSSLVDMYGKCND 181
Query: 98 LQDAIKLFDRMPV--RDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLT 155
++ A ++FD M R+ VSW SMI+ + +N F+ + + T R ++ L
Sbjct: 182 VETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTS-DRANQFMLA 240
Query: 156 TMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIER 215
+++SAC ++ HGLV GG+E V +L+ Y KCG ++F +
Sbjct: 241 SVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCH 300
Query: 216 NVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIH 275
+V+++T++I A++ L E ++LF +M G ++PN +T L L ACS + EG +
Sbjct: 301 SVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYL 360
Query: 276 GLLW-KLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAE 314
L+ K G+ D + ++D+ + G ++ A+++ ++ E
Sbjct: 361 SLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIE 400
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 154/476 (32%), Positives = 250/476 (52%), Gaps = 32/476 (6%)
Query: 208 VFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQA 267
VFD + W +I G + ++ E L L+ +M S N T+ S L ACS + A
Sbjct: 71 VFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSA 130
Query: 268 LAEGRKIHGLLWKLGMQSDLCIESALMDLYS----------------------------- 298
E +IH + KLG ++D+ ++L++ Y+
Sbjct: 131 FEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKG 190
Query: 299 --KCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMV 356
K G ++ A +F E + +S T ++ + Q +EA+Q+F + +E D +
Sbjct: 191 YVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSL 250
Query: 357 SAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQ 416
+ L +L GK IHS + K + + LI+MY+KCGE+ ++L+VF + +
Sbjct: 251 ANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKK 310
Query: 417 KNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEF 476
K+ +W ++I+ +A HG G A+ + EM+ GI P +TF ++L ACS+ GLVE+G
Sbjct: 311 KSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLI 370
Query: 477 LVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHG 536
SM RD+ L P EHY C+VD+LGRAGLL EAK FI+ +P ++W ALL AC IH
Sbjct: 371 FYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHK 430
Query: 537 DSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWI 596
+ E+G+ + LI P +V ANI++ + KW + A + MKE+GVAK G S I
Sbjct: 431 NIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTI 490
Query: 597 EIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDEGYVPD-KRCILYYLDQDKKD 651
++ F+ GD+ HP+ + I + + + L++ GYVP+ + +L +D D+++
Sbjct: 491 SLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDERE 546
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 196/434 (45%), Gaps = 64/434 (14%)
Query: 44 SLLSVCGRDGNLHLGSSIHARIIKQ---------PPFFSFDSSRRNALFVWNSLLSMYSK 94
S L C + L IHAR++K F SF S ++ F
Sbjct: 19 SCLQRCSKQEEL---KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDF----------- 64
Query: 95 CGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATL 154
L A +FD DT WN MI GF + + + +++M S ++ + T
Sbjct: 65 ---LPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAY---TF 118
Query: 155 TTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFD---- 210
++L AC + IH + G+E ++ N+LI SY G F +FD
Sbjct: 119 PSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPE 178
Query: 211 ---------------------------EMIERNVVTWTAVISGLAQNELYEDGLRLFAQM 243
+M E+N ++WT +ISG Q ++ ++ L+LF +M
Sbjct: 179 PDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEM 238
Query: 244 RGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSL 303
+ V P+ ++ ++L AC+ + AL +G+ IH L K ++ D + L+D+Y+KCG +
Sbjct: 239 QNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEM 298
Query: 304 EGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVF 363
E A ++F++ ++ + T ++ +A +G EAI F + +GI+ + +AVL
Sbjct: 299 EEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTAC 358
Query: 364 GVGTSLPLGKQIHSLIIKKNFSQNPFVSN--GLINMYSKCGELHDSLQVFYEMTQK-NSI 420
+ GK I ++++++ P + + ++++ + G L ++ + EM K N++
Sbjct: 359 SYTGLVEEGKLIF-YSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAV 417
Query: 421 SWNSVIAAFARHGD 434
W +++ A H +
Sbjct: 418 IWGALLKACRIHKN 431
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 135/318 (42%), Gaps = 50/318 (15%)
Query: 18 LKSKAPISQYPFPATSESVLNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSS 77
L S AP + Y FP SLL C + IHA+I K
Sbjct: 107 LCSSAPHNAYTFP-------------SLLKACSNLSAFEETTQIHAQITKL--------G 145
Query: 78 RRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFK 137
N ++ NSL++ Y+ G + A LFDR+P D VSWNS+I G+++ D F+
Sbjct: 146 YENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFR 205
Query: 138 QMSESR-----TVYSRF-----------------------DKATLTTMLSACDGPEFSSV 169
+M+E T+ S + D +L LSAC
Sbjct: 206 KMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQ 265
Query: 170 SRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQ 229
+ IH + + +G LI Y KCG + +VF + +++V WTA+ISG A
Sbjct: 266 GKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAY 325
Query: 230 NELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKI-HGLLWKLGMQSDLC 288
+ + + F +M+ + PN +T+ + L ACS + EG+ I + + ++ +
Sbjct: 326 HGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIE 385
Query: 289 IESALMDLYSKCGSLEGA 306
++DL + G L+ A
Sbjct: 386 HYGCIVDLLGRAGLLDEA 403
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 103/237 (43%), Gaps = 33/237 (13%)
Query: 2 KSGRKFNTHLPSWVDSLKSKAPISQYPFPATSESVLNHAHLSSLLSVCGRDGNLHLGSSI 61
K+ + T + +V + +K + + S+ ++ L++ LS C + G L G I
Sbjct: 210 KNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWI 269
Query: 62 HARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMIS 121
H+ + K + R + L+ MY+KCGE+++A+++F + + +W ++IS
Sbjct: 270 HSYLNK--------TRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALIS 321
Query: 122 GFLRN---RDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVF 178
G+ + R+ + F ++M V T T +L+AC S + G +
Sbjct: 322 GYAYHGHGREAISKFMEMQKMGIKPNV------ITFTAVLTAC-----SYTGLVEEGKLI 370
Query: 179 VGGFEREITVGNALITSYFKC--------GCFCQGRQVFDEM-IERNVVTWTAVISG 226
ER+ + + ++ C G + ++ EM ++ N V W A++
Sbjct: 371 FYSMERDYNLKPTI--EHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKA 425
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 179/570 (31%), Positives = 295/570 (51%), Gaps = 33/570 (5%)
Query: 58 GSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWN 117
G IH +I+ F S V NS+L MY+ L A KLFD M RD +SW+
Sbjct: 144 GEKIHGYVIRSG-FCGISS-------VQNSILCMYADSDSLS-ARKLFDEMSERDVISWS 194
Query: 118 SMISGFLRNRDFDAGFRFFKQM-SESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGL 176
+I ++++++ G + FK+M E++T D T+T++L AC E V R +HG
Sbjct: 195 VVIRSYVQSKEPVVGLKLFKEMVHEAKT---EPDCVTVTSVLKACTVMEDIDVGRSVHGF 251
Query: 177 VFVGGFE-REITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYED 235
GF+ ++ V N+LI Y K +VFDE RN+V+W ++++G N+ Y++
Sbjct: 252 SIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDE 311
Query: 236 GLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMD 295
L +F M +V + +T +S L C + + IHG++ + G +S+ S+L+D
Sbjct: 312 ALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLID 371
Query: 296 LYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANM 355
Y+ C ++ A + +S D VS + ++ A G +EAI IF + +A
Sbjct: 372 AYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTP---NAIT 428
Query: 356 VSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPF-VSNGLINMYSKCGELHDSLQVFYEM 414
V ++L V L K H + I+++ + N V +++ Y+KCG + + + F ++
Sbjct: 429 VISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQI 488
Query: 415 TQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGM 474
T+KN ISW +I+A+A +G +AL ++EM+ G P VT+L+ L AC+H GLV+KG+
Sbjct: 489 TEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGL 548
Query: 475 EFLVSMT-RDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPEN--RGVLVWQALLGA 531
SM DH+ P +HY+C+VDML RAG + A I+ LPE+ G W A+L
Sbjct: 549 MIFKSMVEEDHK--PSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSG 606
Query: 532 CSIHGDSEMGKFAADQLILA-----APASSAPHVLMANIYSAEGKWKERAGAIKRMKEKG 586
C + K ++A P S+ ++L ++ ++AE W++ A + +KE+
Sbjct: 607 CR----NRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERK 662
Query: 587 VAKEVGVSWIEIDKQVSSFVVGDKLHPQAD 616
V G S + F+ GDKL Q+D
Sbjct: 663 VRVVAGYSMVREGNLAKRFLAGDKL-SQSD 691
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 132/458 (28%), Positives = 231/458 (50%), Gaps = 14/458 (3%)
Query: 82 LFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSE 141
LF NS+ Y KCG+L ++ FD M RD+VSWN ++ G L + G +F ++
Sbjct: 61 LFQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKL-- 118
Query: 142 SRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGC 201
R + +TL ++ AC F IHG V GF +V N+++ Y
Sbjct: 119 -RVWGFEPNTSTLVLVIHACRSLWFD--GEKIHGYVIRSGFCGISSVQNSILCMYADSDS 175
Query: 202 FCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQM-RGGSVSPNTLTYLSSLM 260
R++FDEM ER+V++W+ VI Q++ GL+LF +M P+ +T S L
Sbjct: 176 L-SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLK 234
Query: 261 ACSGVQALAEGRKIHGLLWKLGMQ-SDLCIESALMDLYSKCGSLEGAWQIFESAEELDGV 319
AC+ ++ + GR +HG + G +D+ + ++L+D+YSK ++ A+++F+ + V
Sbjct: 235 ACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIV 294
Query: 320 SLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLI 379
S IL F N +EA+++F +V +EVD V ++L V K IH +I
Sbjct: 295 SWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVI 354
Query: 380 IKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRAL 439
I++ + N + LI+ Y+ C + D+ V MT K+ +S +++I+ A G A+
Sbjct: 355 IRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAI 414
Query: 440 QFYEEMRVGGIAPTDVTFLSLLHACS-HAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVD 498
+ MR P +T +SLL+ACS A L +++ R ++ S + +VD
Sbjct: 415 SIFCHMR---DTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTS-IVD 470
Query: 499 MLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHG 536
+ G ++ A+ + + E + ++ W ++ A +I+G
Sbjct: 471 AYAKCGAIEMARRTFDQITE-KNIISWTVIISAYAING 507
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 125/483 (25%), Positives = 219/483 (45%), Gaps = 53/483 (10%)
Query: 189 GNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSV 248
GN++ Y KCG C G + FD M R+ V+W ++ GL E+GL F+++R
Sbjct: 64 GNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGF 123
Query: 249 SPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQ 308
PNT T + + AC + +G KIHG + + G ++++++ +Y+ SL A +
Sbjct: 124 EPNTSTLVLVIHACRSL--WFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSL-SARK 180
Query: 309 IFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIV-TLGIEVDANMVSAVLGVFGVGT 367
+F+ E D +S +V++ ++ Q+ +++F +V E D V++VL V
Sbjct: 181 LFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVME 240
Query: 368 SLPLGKQIHSLIIKKNFS-QNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVI 426
+ +G+ +H I++ F + FV N LI+MYSK ++ + +VF E T +N +SWNS++
Sbjct: 241 DIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSIL 300
Query: 427 AAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACS-----------HAGLVEKGME 475
A F + AL+ + M + +VT +SLL C H ++ +G E
Sbjct: 301 AGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYE 360
Query: 476 -------------FLVSMTRDHRLSPRSEHYACVVDM------LGRAGLLKEAKNFIEGL 516
S+ D S Y VV L AG EA + +
Sbjct: 361 SNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHM 420
Query: 517 PENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHV--LMANIYSAEGKWKE 574
+ + +LL ACS+ D K+A I + A + V + + Y+ G +
Sbjct: 421 RDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEM 480
Query: 575 RAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDEGY 634
++ EK + +SW I +S++ + + L +A +F E +K +GY
Sbjct: 481 ARRTFDQITEKNI-----ISWTVI---ISAYAI-NGLPDKALALFDE-------MKQKGY 524
Query: 635 VPD 637
P+
Sbjct: 525 TPN 527
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 148/310 (47%), Gaps = 15/310 (4%)
Query: 7 FNTHLPSWVDSLKSKAPISQYPFPATSESVLNHAHLSSLLSVCGRDGNLHLGSSIHARII 66
+N+ L +V + + + + ++ + SLL VC SIH II
Sbjct: 296 WNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVII 355
Query: 67 KQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRN 126
++ ++S+ +SL+ Y+ C + DA + D M +D VS ++MISG
Sbjct: 356 RR----GYESNE----VALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHA 407
Query: 127 RDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFE-RE 185
D F M ++ + T+ ++L+AC S+ HG+ +
Sbjct: 408 GRSDEAISIFCHMRDTP------NAITVISLLNACSVSADLRTSKWAHGIAIRRSLAIND 461
Query: 186 ITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRG 245
I+VG +++ +Y KCG R+ FD++ E+N+++WT +IS A N L + L LF +M+
Sbjct: 462 ISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQ 521
Query: 246 GSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEG 305
+PN +TYL++L AC+ + +G I + + + L S ++D+ S+ G ++
Sbjct: 522 KGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDT 581
Query: 306 AWQIFESAEE 315
A ++ ++ E
Sbjct: 582 AVELIKNLPE 591
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 156/454 (34%), Positives = 245/454 (53%), Gaps = 38/454 (8%)
Query: 208 VFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQA 267
VF + NV +TA+I G + DG+ L+ +M SV P+ S L AC
Sbjct: 83 VFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACD---- 138
Query: 268 LAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVA 327
L R+IH + KLG S + +M++Y K G L A ++F+ + D V+ TV++
Sbjct: 139 LKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINC 198
Query: 328 FAQNGFEEEAIQIF------------------------TRIVTLGIEVDANMVSA----- 358
+++ GF +EA+++F + + L E+ VSA
Sbjct: 199 YSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTA 258
Query: 359 --VLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQ 416
VL +L LG+ +HS + + + FV N LINMYS+CG+++++ +VF M
Sbjct: 259 VCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRD 318
Query: 417 KNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEF 476
K+ IS+N++I+ A HG A+ + +M G P VT ++LL+ACSH GL++ G+E
Sbjct: 319 KDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEV 378
Query: 477 LVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHG 536
SM R + P+ EHY C+VD+LGR G L+EA FIE +P ++ LL AC IHG
Sbjct: 379 FNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHG 438
Query: 537 DSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWI 596
+ E+G+ A +L + S +VL++N+Y++ GKWKE + M++ G+ KE G S I
Sbjct: 439 NMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTI 498
Query: 597 EIDKQVSSFVVGDKLHPQADIIF---LELSRLLK 627
E+D Q+ F+VGD HP + I+ EL+R+L+
Sbjct: 499 EVDNQIHEFLVGDIAHPHKEAIYQRLQELNRILR 532
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 125/531 (23%), Positives = 220/531 (41%), Gaps = 85/531 (16%)
Query: 44 SLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIK 103
+L+SV N+ SIHA+II+ F D+ FV L+ + S + A
Sbjct: 31 TLISVLRSCKNIAHVPSIHAKIIRT--FHDQDA------FVVFELIRVCSTLDSVDYAYD 82
Query: 104 LFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDG 163
+F + + + +MI GF+ + G + +M + + D +T++L ACD
Sbjct: 83 VFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLP---DNYVITSVLKACD- 138
Query: 164 PEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERN------- 216
V R IH V GF +VG ++ Y K G +++FDEM +R+
Sbjct: 139 ---LKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVM 195
Query: 217 ------------------------VVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNT 252
V WTA+I GL +N+ L LF +M+ +VS N
Sbjct: 196 INCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANE 255
Query: 253 LTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFES 312
T + L ACS + AL GR +H + M+ + +AL+++YS+CG + A ++F
Sbjct: 256 FTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRV 315
Query: 313 AEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLG 372
+ D +S ++ A +G EAI F +V G + + A+L G L +G
Sbjct: 316 MRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIG 375
Query: 373 KQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARH 432
++ + +K+ F+ P + + + ++ R
Sbjct: 376 LEVFNS-MKRVFNVEPQIEH-----------------------------YGCIVDLLGRV 405
Query: 433 GDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEH 492
G A +F E + I P + +LL AC G +E G + + +P S
Sbjct: 406 GRLEEAYRFIENI---PIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESE--NPDSGT 460
Query: 493 YACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKF 543
Y + ++ +G KE+ E + ++ G+ + G +I D+++ +F
Sbjct: 461 YVLLSNLYASSGKWKESTEIRESMRDS-GI---EKEPGCSTIEVDNQIHEF 507
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 269 bits (688), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 171/549 (31%), Positives = 281/549 (51%), Gaps = 44/549 (8%)
Query: 88 LLSMYSKCGEL----QDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESR 143
LL + S+C L Q +L R +RD + N +++ ++ DF + + R
Sbjct: 9 LLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVI--LHSIR 66
Query: 144 TVYSRFDKATLTTMLSACDGP------------------------------EFSSV--SR 171
+V S F TL + + CD P +FS + +
Sbjct: 67 SVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGK 126
Query: 172 MIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNE 231
IHG+V GF +I V N+L+ Y CG +VF EM R+VV+WT +I+G +
Sbjct: 127 QIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTG 186
Query: 232 LYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIES 291
LY++ L F++M V PN TY+ L++ V L+ G+ IHGL+ K L +
Sbjct: 187 LYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGN 243
Query: 292 ALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTL-GIE 350
AL+D+Y KC L A ++F E+ D VS ++ +EAI +F+ + T GI+
Sbjct: 244 ALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIK 303
Query: 351 VDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQV 410
D +++++VL ++ G+ +H I+ + + +++MY+KCG + +L++
Sbjct: 304 PDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEI 363
Query: 411 FYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLV 470
F + KN +WN+++ A HG G +L+++EEM G P VTFL+ L+AC H GLV
Sbjct: 364 FNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLV 423
Query: 471 EKGMEFLVSM-TRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALL 529
++G + M +R++ L P+ EHY C++D+L RAGLL EA ++ +P V + A+L
Sbjct: 424 DEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAIL 483
Query: 530 GACSIHGD-SEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVA 588
AC G E+ K D + S +VL++NI++A +W + A + MK KG++
Sbjct: 484 SACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGIS 543
Query: 589 KEVGVSWIE 597
K G S+IE
Sbjct: 544 KVPGSSYIE 552
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 109/417 (26%), Positives = 196/417 (47%), Gaps = 17/417 (4%)
Query: 7 FNTHLPSWVDSLKSKAPISQYPFPATSESVLNHAHLSSLLSVCGRDGNLHLGSSIHARII 66
+NT L S+ K + I Y ++ + + CG+ + G IH I+
Sbjct: 74 YNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHG-IV 132
Query: 67 KQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRN 126
+ F+ + ++V NSL+ Y CGE ++A K+F MPVRD VSW +I+GF R
Sbjct: 133 TKMGFY-------DDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRT 185
Query: 127 RDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREI 186
+ F +M + AT +L + S+ + IHGL+ +
Sbjct: 186 GLYKEALDTFSKMDVEPNL------ATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISL 239
Query: 187 TVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGG 246
GNALI Y KC +VF E+ +++ V+W ++ISGL E ++ + LF+ M+
Sbjct: 240 ETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTS 299
Query: 247 S-VSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEG 305
S + P+ S L AC+ + A+ GR +H + G++ D I +A++D+Y+KCG +E
Sbjct: 300 SGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIET 359
Query: 306 AWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGV 365
A +IF + + +L A +G E+++ F +V LG + + A L
Sbjct: 360 ALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCH 419
Query: 366 GTSLPLGKQIHSLIIKKNFSQNPFVSN--GLINMYSKCGELHDSLQVFYEMTQKNSI 420
+ G++ + + ++ P + + +I++ + G L ++L++ M K +
Sbjct: 420 TGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDV 476
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 268 bits (685), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 178/566 (31%), Positives = 289/566 (51%), Gaps = 41/566 (7%)
Query: 40 AHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQ 99
A + S+ S+CG G ++H ++ + AL V NS++ MY KCG
Sbjct: 394 ATVVSITSICGDLSFSREGRAVHGYTVRMEM-------QSRALEVINSVIDMYGKCGLTT 446
Query: 100 DAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLS 159
A LF RD VSWNSMIS F +N FK++ + S+F +T+ +L+
Sbjct: 447 QAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSC-SKFSLSTVLAILT 505
Query: 160 ACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIE-RNVV 218
+CD + L+F G ++ K G + M E R++
Sbjct: 506 SCDSSD---------SLIF----------GKSVHCWLQKLGDLTSAFLRLETMSETRDLT 546
Query: 219 TWTAVISGLAQNELYEDGLRLFAQM-RGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGL 277
+W +VISG A + + + LR F M R G + + +T L ++ A + + +GR HGL
Sbjct: 547 SWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGL 606
Query: 278 LWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEA 337
K + D +++ L+ +Y +C +E A ++F + + S ++ A +QN E
Sbjct: 607 AIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREV 666
Query: 338 IQIFTRIVTLGIEVDANMVSAVLGVFGVGTSL---PLGKQIHSLIIKKNFSQNPFVSNGL 394
Q+F + +++ N ++ V G+ T L G Q H +I++ F NPFVS L
Sbjct: 667 FQLFRNL-----KLEPNEITFV-GLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAAL 720
Query: 395 INMYSKCGELHDSLQVFYEMTQKNSIS-WNSVIAAFARHGDGSRALQFYEEMRVGG-IAP 452
++MYS CG L ++VF + NSIS WNSVI+A HG G +A++ ++E+ + P
Sbjct: 721 VDMYSSCGMLETGMKVFRN-SGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEP 779
Query: 453 TDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNF 512
+F+SLL ACSH+G +++G+ + M + P +EH +VDMLGRAG L+EA F
Sbjct: 780 NKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEF 839
Query: 513 IEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKW 572
I G+ E + VW ALL AC+ HGD+++GK A+ L P +++ ++ +AN Y G W
Sbjct: 840 ITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGW 899
Query: 573 KERAGAIKRMKEKGVAKEVGVSWIEI 598
+E K +++ + K G S I++
Sbjct: 900 EEAVRLRKMVEDNALKKLPGYSVIDV 925
Score = 169 bits (429), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 139/505 (27%), Positives = 232/505 (45%), Gaps = 41/505 (8%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDA 101
S ++S C L LG S+H +IK S + V NS++SMYSKCG+ + A
Sbjct: 292 FSCVISACSSIEELTLGESLHGLVIKS------GYSPEAHVSVGNSIISMYSKCGDTEAA 345
Query: 102 IKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSAC 161
+F+ + RD +S N++++GF N F+ F QM + + D AT+ ++ S C
Sbjct: 346 ETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKI--QPDIATVVSITSIC 403
Query: 162 DGPEFSSVSRMIHGLVFVGGFE-REITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTW 220
FS R +HG + R + V N++I Y KCG Q +F R++V+W
Sbjct: 404 GDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSW 463
Query: 221 TAVISGLAQNELYEDGLRLFAQMRGG-SVSPNTL-TYLSSLMACSGVQALAEGRKIHGLL 278
++IS +QN LF ++ S S +L T L+ L +C +L G+ +H L
Sbjct: 464 NSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWL 523
Query: 279 WKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAI 338
KLG DL S LE +E D S ++ A +G E++
Sbjct: 524 QKLG------------DLTSAFLRLETM------SETRDLTSWNSVISGCASSGHHLESL 565
Query: 339 QIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPL---GKQIHSLIIKKNFSQNPFVSNGLI 395
+ F + G ++ ++++ +LG +L L G+ H L IK + + N LI
Sbjct: 566 RAFQAMSREG-KIRHDLIT-LLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLI 623
Query: 396 NMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDV 455
MY +C ++ +++VF ++ N SWN VI+A +++ G Q + ++ + P ++
Sbjct: 624 TMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLK---LEPNEI 680
Query: 456 TFLSLLHACSHAGLVEKGMEFLVSMT-RDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIE 514
TF+ LL A + G GM+ + R + +P A +VDM G+L+
Sbjct: 681 TFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVS--AALVDMYSSCGMLETGMKVFR 738
Query: 515 GLPENRGVLVWQALLGACSIHGDSE 539
N + W +++ A HG E
Sbjct: 739 NSGVN-SISAWNSVISAHGFHGMGE 762
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/456 (27%), Positives = 211/456 (46%), Gaps = 31/456 (6%)
Query: 88 LLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYS 147
LL+ Y + GEL + LFD + +D + WNSMI+ +N + A F +M +
Sbjct: 128 LLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKG---N 184
Query: 148 RFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQ 207
FD TL SA S M+H L G + ++ NAL+ Y K
Sbjct: 185 EFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAEC 244
Query: 208 VFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQA 267
VF M R++V+W +++ N L+ F M G +T+T+ + ACS ++
Sbjct: 245 VFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEE 304
Query: 268 LAEGRKIHGLLWKLGM--QSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVIL 325
L G +HGL+ K G ++ + + ++++ +YSKCG E A +FE D +S IL
Sbjct: 305 LTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAIL 364
Query: 326 VAFAQNGFEEEAIQIFTRIVTLG-IEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNF 384
FA NG EEA I ++ ++ I+ D V ++ + G + G+ +H ++
Sbjct: 365 NGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEM 424
Query: 385 SQNPF-VSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYE 443
V N +I+MY KCG + +F T ++ +SWNS+I+AF+++G +A ++
Sbjct: 425 QSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFK 484
Query: 444 EMRVGGIAPTDV---TFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDML 500
E+ V + + T L++L +C + D + +S H C + L
Sbjct: 485 EV-VSEYSCSKFSLSTVLAILTSCD---------------SSDSLIFGKSVH--CWLQKL 526
Query: 501 GRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHG 536
G L A +E + E R + W +++ C+ G
Sbjct: 527 GD---LTSAFLRLETMSETRDLTSWNSVISGCASSG 559
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 118/443 (26%), Positives = 194/443 (43%), Gaps = 35/443 (7%)
Query: 103 KLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACD 162
LFD +P R+ NR ++ F F R V F M + +
Sbjct: 70 NLFDELPERE-------------NRTMESSFMFL------RDVLRSF------MMRTETE 104
Query: 163 GPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTA 222
P R +H G +++ + L+T Y + G +FDE+ E++V+ W +
Sbjct: 105 TP------RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNS 158
Query: 223 VISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLG 282
+I+ L QN Y + LF +M ++ T L + A S + + +H L + G
Sbjct: 159 MITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETG 218
Query: 283 MQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFT 342
+ D + +ALM+LY+K +L A +F E D VS I+ NG +++Q F
Sbjct: 219 LVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFK 278
Query: 343 RIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVS--NGLINMYSK 400
+ G E D S V+ L LG+ +H L+IK +S VS N +I+MYSK
Sbjct: 279 SMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSK 338
Query: 401 CGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMR-VGGIAPTDVTFLS 459
CG+ + VF E+ ++ IS N+++ FA +G A +M+ V I P T +S
Sbjct: 339 CGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVS 398
Query: 460 LLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPEN 519
+ C +G R S E V+DM G+ GL +A+ + +
Sbjct: 399 ITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFK-TTTH 457
Query: 520 RGVLVWQALLGACSIHGDSEMGK 542
R ++ W +++ A S +G + K
Sbjct: 458 RDLVSWNSMISAFSQNGFTHKAK 480
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 266 bits (681), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 189/690 (27%), Positives = 312/690 (45%), Gaps = 91/690 (13%)
Query: 25 SQYPFPATSESVLNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFV 84
S Y + ++ L H + LL +C +HA+++ F S N
Sbjct: 43 SYYSLTSNNDQSLFH-YFDHLLGLCLTAQQCR---QVHAQVLLSDFIFRSGSLAAN---- 94
Query: 85 WNSLLSMYSKCGELQDAIKLFDRMPV---RDTVSWNSMISGFLRNRDFDAGFRFFKQMSE 141
L+S+Y++ G L DA +F+ + + D WNS++ + + ++ ++ M +
Sbjct: 95 ---LISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQ 151
Query: 142 SRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGC 201
D L +L AC + R H V G + + V N L+T Y K G
Sbjct: 152 RGLT---GDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGR 208
Query: 202 FCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMA 261
+F EM RN ++W +I G +Q E +++F M+ P+ +T+ S L
Sbjct: 209 MGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSC 268
Query: 262 -----------------------------------CSGVQALAEGRKIHGLLWKLGMQSD 286
C+ ++AL+ K+HG + K G +
Sbjct: 269 HSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEY 328
Query: 287 LCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVT 346
L +AL+ +Y K G ++ A +F S ++ +F G +EA+ +F+ +
Sbjct: 329 LPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEE 388
Query: 347 LG--IEVDANMVS----------------------------------AVLGVFGVGTSLP 370
+ V AN+V+ + + + LP
Sbjct: 389 MNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELP 448
Query: 371 ---LGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIA 427
LG++IH +I+ + S+N V N L+NMY+KCG L + VF + K+ ISWNS+I
Sbjct: 449 ALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIK 508
Query: 428 AFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLS 487
+ HG +AL ++ M G P + +++L ACSHAGLVEKG E SM++ L
Sbjct: 509 GYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLE 568
Query: 488 PRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQ 547
P+ EHYAC+VD+LGR G LKEA ++ +P V V ALL +C +H + ++ + A Q
Sbjct: 569 PQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQ 628
Query: 548 LILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVV 607
L + P + ++L++NIYSA G+W+E A K+K + K G SWIE+ K+ F
Sbjct: 629 LSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEVKKKKYKFSS 688
Query: 608 GDKLHPQADIIFLELSRLLKHLKDEGYVPD 637
G + + + I+ L L+ H+ +G D
Sbjct: 689 GSIVQSEFETIYPVLEDLVSHMLKKGPTHD 718
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 266 bits (679), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 137/434 (31%), Positives = 252/434 (58%), Gaps = 5/434 (1%)
Query: 220 WTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLW 279
+ +I G +E+ L + +M P+ TY L AC+ ++++ EG++IHG ++
Sbjct: 100 FNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVF 159
Query: 280 KLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQ 339
KLG+++D+ ++++L+++Y +CG +E + +FE E S + ++ A A G E +
Sbjct: 160 KLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLL 219
Query: 340 IFTRIVT---LGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLIN 396
+F + + L E ++ MVSA+L G +L LG IH +++ N V L++
Sbjct: 220 LFRGMCSETNLKAE-ESGMVSALLACANTG-ALNLGMSIHGFLLRNISELNIIVQTSLVD 277
Query: 397 MYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVT 456
MY KCG L +L +F +M ++N+++++++I+ A HG+G AL+ + +M G+ P V
Sbjct: 278 MYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVV 337
Query: 457 FLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGL 516
++S+L+ACSH+GLV++G M ++ ++ P +EHY C+VD+LGRAGLL+EA I+ +
Sbjct: 338 YVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSI 397
Query: 517 PENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERA 576
P + ++W+ L C + + E+G+ AA +L+ + + ++L++N+YS W + A
Sbjct: 398 PIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVA 457
Query: 577 GAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDEGYVP 636
+ KG+ + G S +E+ + FV D+ HP+ I+ L ++ LK EGY P
Sbjct: 458 RTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGYSP 517
Query: 637 DKRCILYYLDQDKK 650
D IL +D+++K
Sbjct: 518 DLTQILLNVDEEEK 531
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 151/307 (49%), Gaps = 11/307 (3%)
Query: 7 FNTHLPSWVDSLKSKAPISQYPFPATSESVLNHAHLSSLLSVCGRDGNLHLGSSIHARII 66
FNT + +V+ + + + Y + ++ LL C R ++ G IH ++
Sbjct: 100 FNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVF 159
Query: 67 KQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRN 126
K ++ +FV NSL++MY +CGE++ + +F+++ + SW+SM+S
Sbjct: 160 K----LGLEAD----VFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGM 211
Query: 127 RDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREI 186
+ F+ M + + +++ + + L AC ++ IHG + E I
Sbjct: 212 GMWSECLLLFRGMCSETNL--KAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNI 269
Query: 187 TVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGG 246
V +L+ Y KCGC + +F +M +RN +T++A+ISGLA + E LR+F++M
Sbjct: 270 IVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKE 329
Query: 247 SVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLG-MQSDLCIESALMDLYSKCGSLEG 305
+ P+ + Y+S L ACS + EGR++ + K G ++ L+DL + G LE
Sbjct: 330 GLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEE 389
Query: 306 AWQIFES 312
A + +S
Sbjct: 390 ALETIQS 396
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 156/550 (28%), Positives = 288/550 (52%), Gaps = 16/550 (2%)
Query: 49 CGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRM 108
C G L G +H F+ + ++ FV +S+ S YSK G +A F +
Sbjct: 240 CSNLGALKEGRCLHG--------FAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFREL 291
Query: 109 PVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSS 168
D SW S+I+ R+ D + F F +M +++ ++ D ++ +++
Sbjct: 292 GDEDMFSWTSIIASLARSGDMEESFDMFWEM-QNKGMHP--DGVVISCLINELGKMMLVP 348
Query: 169 VSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIER-NVVTWTAVISGL 227
+ HG V F + TV N+L++ Y K ++F + E N W ++ G
Sbjct: 349 QGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGY 408
Query: 228 AQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDL 287
+ + + + LF +++ + ++ + S + +CS + A+ G+ +H + K + +
Sbjct: 409 GKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTI 468
Query: 288 CIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTL 347
+ ++L+DLY K G L AW++F A+ + ++ ++ ++ E+AI +F R+V+
Sbjct: 469 SVVNSLIDLYGKMGDLTVAWRMFCEADT-NVITWNAMIASYVHCEQSEKAIALFDRMVSE 527
Query: 348 GIEVDA-NMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHD 406
+ + +V+ ++ G SL G+ IH I + N +S LI+MY+KCG L
Sbjct: 528 NFKPSSITLVTLLMACVNTG-SLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEK 586
Query: 407 SLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSH 466
S ++F QK+++ WN +I+ + HGD A+ +++M + PT TFL+LL AC+H
Sbjct: 587 SRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTH 646
Query: 467 AGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQ 526
AGLVE+G + + M + + P +HY+C+VD+L R+G L+EA++ + +P + ++W
Sbjct: 647 AGLVEQGKKLFLKM-HQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWG 705
Query: 527 ALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKG 586
LL +C HG+ EMG A++ + + P + ++++AN+YSA GKW+E A + M+E G
Sbjct: 706 TLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESG 765
Query: 587 VAKEVGVSWI 596
V K G S +
Sbjct: 766 VGKRAGHSVV 775
Score = 195 bits (495), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 130/531 (24%), Positives = 250/531 (47%), Gaps = 23/531 (4%)
Query: 38 NHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGE 97
+H ++S C H+G+ +H ++K F R A V S + YSKCG
Sbjct: 124 DHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGF-----DRNTA--VGASFVYFYSKCGF 176
Query: 98 LQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTM 157
LQDA +FD MP RD V+W ++ISG ++N + + G + +M + + + + TL
Sbjct: 177 LQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECG 236
Query: 158 LSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNV 217
AC R +HG G V +++ + Y K G + F E+ + ++
Sbjct: 237 FQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDM 296
Query: 218 VTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGL 277
+WT++I+ LA++ E+ +F +M+ + P+ + + + + +G+ HG
Sbjct: 297 FSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGF 356
Query: 278 LWKLGMQSDLCIESALMDLYSKCGSLEGAWQIF-ESAEELDGVSLTVILVAFAQNGFEEE 336
+ + D + ++L+ +Y K L A ++F +EE + + +L + + +
Sbjct: 357 VIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVK 416
Query: 337 AIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLIN 396
I++F +I LGIE+D+ ++V+ ++ LGK +H ++K + V N LI+
Sbjct: 417 CIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLID 476
Query: 397 MYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVT 456
+Y K G+L + ++F E N I+WN++IA++ +A+ ++ M P+ +T
Sbjct: 477 LYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSIT 535
Query: 457 FLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEH------YACVVDMLGRAGLLKEAK 510
++LL AC + G +E+G HR +EH A ++DM + G L++++
Sbjct: 536 LVTLLMACVNTGSLERGQMI-------HRYITETEHEMNLSLSAALIDMYAKCGHLEKSR 588
Query: 511 NFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVL 561
+ + + W ++ +HGD E DQ+ + + P L
Sbjct: 589 ELFDA-GNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFL 638
Score = 192 bits (487), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 137/459 (29%), Positives = 226/459 (49%), Gaps = 19/459 (4%)
Query: 82 LFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSE 141
+FV + L+S Y+ G+ + ++F + RD WNS+I N D+ FF M
Sbjct: 59 IFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLL 118
Query: 142 SRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFV-GGFEREITVGNALITSYFKCG 200
S F T ++SAC + V +HGLV GGF+R VG + + Y KCG
Sbjct: 119 SGQSPDHF---TAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCG 175
Query: 201 CFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMR--GGSVS-PNTLTYLS 257
VFDEM +R+VV WTA+ISG QN E GL +M G V PN T
Sbjct: 176 FLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLEC 235
Query: 258 SLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELD 317
ACS + AL EGR +HG K G+ S ++S++ YSK G+ A+ F + D
Sbjct: 236 GFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDED 295
Query: 318 GVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHS 377
S T I+ + A++G EE+ +F + G+ D ++S ++ G +P GK H
Sbjct: 296 MFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHG 355
Query: 378 LIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQK-NSISWNSVIAAFARHGDGS 436
+I+ FS + V N L++MY K L + ++F ++++ N +WN+++ + +
Sbjct: 356 FVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHV 415
Query: 437 RALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGME---FLVSMTRDHRLSPRSEHY 493
+ ++ + +++ GI + S++ +CSH G V G ++V + D +S +
Sbjct: 416 KCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNS-- 473
Query: 494 ACVVDMLGRAGLLKEA-KNFIEGLPENRGVLVWQALLGA 531
++D+ G+ G L A + F E + V+ W A++ +
Sbjct: 474 --LIDLYGKMGDLTVAWRMFCEA---DTNVITWNAMIAS 507
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 158/363 (43%), Gaps = 5/363 (1%)
Query: 171 RMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQN 230
R + L+ GG I V + LI+SY G +VF + R++ W ++I N
Sbjct: 44 RKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSN 103
Query: 231 ELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKL-GMQSDLCI 289
Y L F M SP+ T + AC+ + G +HGL+ K G + +
Sbjct: 104 GDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAV 163
Query: 290 ESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGI 349
++ + YSKCG L+ A +F+ + D V+ T I+ QNG E + ++ + G
Sbjct: 164 GASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGS 223
Query: 350 EVDANMVSAVLGVFGVGT---SLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHD 406
+VD + F + +L G+ +H +K + + FV + + + YSK G +
Sbjct: 224 DVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSE 283
Query: 407 SLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSH 466
+ F E+ ++ SW S+IA+ AR GD + + EM+ G+ P V L++
Sbjct: 284 AYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGK 343
Query: 467 AGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQ 526
LV +G F + R H S S ++ M + LL A+ + E W
Sbjct: 344 MMLVPQGKAFHGFVIR-HCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWN 402
Query: 527 ALL 529
+L
Sbjct: 403 TML 405
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 156/331 (47%), Gaps = 23/331 (6%)
Query: 37 LNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCG 96
++ A +S++S C G + LG S+H ++K +S + V NSL+ +Y K G
Sbjct: 431 IDSASATSVISSCSHIGAVLLGKSLHCYVVK--------TSLDLTISVVNSLIDLYGKMG 482
Query: 97 ELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKA--TL 154
+L A ++F + ++WN+MI+ ++ + F +M V F + TL
Sbjct: 483 DLTVAWRMFCEADT-NVITWNAMIASYVHCEQSEKAIALFDRM-----VSENFKPSSITL 536
Query: 155 TTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIE 214
T+L AC +MIH + E +++ ALI Y KCG + R++FD +
Sbjct: 537 VTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQ 596
Query: 215 RNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKI 274
++ V W +ISG + E + LF QM V P T+L+ L AC+ + +G+K+
Sbjct: 597 KDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKL 656
Query: 275 HGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAE-ELDGVSLTVILVAFAQNGF 333
+ + ++ +L S L+DL S+ G+LE A S DGV +L + +G
Sbjct: 657 FLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGE 716
Query: 334 EEEAIQIFTRIVTLGIEVD------ANMVSA 358
E I++ R V + D ANM SA
Sbjct: 717 FEMGIRMAERAVASDPQNDGYYIMLANMYSA 747
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 92/175 (52%), Gaps = 3/175 (1%)
Query: 368 SLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIA 427
SL ++ ++LII S+N FV++ LI+ Y+ G+ + S +VF+ +T+++ WNS+I
Sbjct: 39 SLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIK 98
Query: 428 AFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLS 487
A +GD +R+L F+ M + G +P T ++ AC+ G F+ + H
Sbjct: 99 AHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVG-TFVHGLVLKHGGF 157
Query: 488 PRSEHY-ACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMG 541
R+ A V + G L++A + +P+ R V+ W A++ +G+SE G
Sbjct: 158 DRNTAVGASFVYFYSKCGFLQDACLVFDEMPD-RDVVAWTAIISGHVQNGESEGG 211
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 72/155 (46%), Gaps = 11/155 (7%)
Query: 7 FNTHLPSWVDSLKSKAPISQYPFPATSESVLNHAHLSSLLSVCGRDGNLHLGSSIHARII 66
+N + S+V +S+ I+ + + + L +LL C G+L G IH I
Sbjct: 501 WNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYIT 560
Query: 67 KQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRN 126
++ L + +L+ MY+KCG L+ + +LFD +D V WN MISG+ +
Sbjct: 561 --------ETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMH 612
Query: 127 RDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSAC 161
D ++ F QM ES + T +LSAC
Sbjct: 613 GDVESAIALFDQMEESDV---KPTGPTFLALLSAC 644
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 261 bits (668), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 167/556 (30%), Positives = 275/556 (49%), Gaps = 18/556 (3%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDA 101
L +LL CG+ G + G S+H K DS +NAL +S YSKC EL A
Sbjct: 154 LVNLLPFCGQCGFVSQGRSVHGVAAKSG--LELDSQVKNAL------ISFYSKCAELGSA 205
Query: 102 IKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSAC 161
LF M + TVSWN+MI + ++ + FK M E T+ +LSA
Sbjct: 206 EVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNV---EISPVTIINLLSAH 262
Query: 162 DGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWT 221
E +H LV G +I+V +L+ +Y +CGC +++ + ++V T
Sbjct: 263 VSHE------PLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLT 316
Query: 222 AVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKL 281
+++S A+ + + F++ R + + + + L C + G +HG K
Sbjct: 317 SIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKS 376
Query: 282 GMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIF 341
G+ + + + L+ +YSK +E +FE +E +S ++ Q+G A ++F
Sbjct: 377 GLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVF 436
Query: 342 TRI-VTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSK 400
++ +T G+ DA ++++L L LGK++H ++ NF FV LI+MY+K
Sbjct: 437 HQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAK 496
Query: 401 CGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSL 460
CG + VF + + +WNS+I+ ++ G RAL Y EMR G+ P ++TFL +
Sbjct: 497 CGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGV 556
Query: 461 LHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENR 520
L AC+H G V++G +M ++ +SP +HYA +V +LGRA L EA I +
Sbjct: 557 LSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKP 616
Query: 521 GVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIK 580
VW ALL AC IH + E+G++ A ++ + + +VLM+N+Y+ E W +
Sbjct: 617 DSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRN 676
Query: 581 RMKEKGVAKEVGVSWI 596
MK+ G +GVS I
Sbjct: 677 MMKDNGYDGYLGVSQI 692
Score = 199 bits (505), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 137/461 (29%), Positives = 230/461 (49%), Gaps = 22/461 (4%)
Query: 82 LFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRN-RDFDAGFRFFKQMS 140
++V SLL++Y K G + A LFD MP RDTV WN++I G+ RN + DA F +
Sbjct: 85 VYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQ 144
Query: 141 ESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCG 200
+ + TL +L C F S R +HG+ G E + V NALI+ Y KC
Sbjct: 145 QGFSP----SATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCA 200
Query: 201 CFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQM--RGGSVSPNTLTYLSS 258
+F EM +++ V+W +I +Q+ L E+ + +F M + +SP T+ L S
Sbjct: 201 ELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLS 260
Query: 259 LMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDG 318
A +H L+ K GM +D+ + ++L+ YS+CG L A +++ SA++
Sbjct: 261 --------AHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSI 312
Query: 319 VSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSL 378
V LT I+ +A+ G + A+ F++ L +++DA + +L + + +G +H
Sbjct: 313 VGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGY 372
Query: 379 IIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRA 438
IK V NGLI MYSK ++ L +F ++ + ISWNSVI+ + G S A
Sbjct: 373 AIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTA 432
Query: 439 LQ-FYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYAC-- 495
+ F++ M GG+ P +T SLL CS + G E R++ +E++ C
Sbjct: 433 FEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNF---ENENFVCTA 489
Query: 496 VVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHG 536
++DM + G +A++ + + + W +++ S+ G
Sbjct: 490 LIDMYAKCGNEVQAESVFKSI-KAPCTATWNSMISGYSLSG 529
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 150/300 (50%), Gaps = 14/300 (4%)
Query: 181 GFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLF 240
G +R + V +L+ Y K GC + +FDEM ER+ V W A+I G ++N D +LF
Sbjct: 80 GLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLF 139
Query: 241 AQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKC 300
M SP+ T ++ L C +++GR +HG+ K G++ D +++AL+ YSKC
Sbjct: 140 IVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKC 199
Query: 301 GSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDA----NMV 356
L A +F ++ VS ++ A++Q+G +EEAI +F + +E+ N++
Sbjct: 200 AELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLL 259
Query: 357 SAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQ 416
SA + + +H L++K + V L+ YS+CG L + +++ Q
Sbjct: 260 SAHVS----------HEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQ 309
Query: 417 KNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEF 476
+ + S+++ +A GD A+ ++ + R + V + +LH C + ++ GM
Sbjct: 310 DSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSL 369
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 259 bits (661), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 186/614 (30%), Positives = 285/614 (46%), Gaps = 54/614 (8%)
Query: 41 HLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLL-SMYSKCGELQ 99
H SLL+ C NL + IH IK + D+ ++ F +L S L
Sbjct: 7 HCLSLLNSCK---NLRALTQIHGLFIK----YGVDT---DSYFTGKLILHCAISISDALP 56
Query: 100 DAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLS 159
A +L P D +N+++ G+ + + F +M V+ D + ++
Sbjct: 57 YARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFP--DSFSFAFVIK 114
Query: 160 ACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVT 219
A + +H G E + VG LI Y CGC R+VFDEM + N+V
Sbjct: 115 AVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVA 174
Query: 220 WTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLW 279
W AVI+ A RG V A R+I +
Sbjct: 175 WNAVIT---------------ACFRGNDV--------------------AGAREIFDKML 199
Query: 280 KLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQ 339
S + ++ Y K G LE A +IF D VS + ++V A NG E+
Sbjct: 200 VRNHTS----WNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFL 255
Query: 340 IFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYS 399
F + G+ + ++ VL S GK +H + K +S V+N LI+MYS
Sbjct: 256 YFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYS 315
Query: 400 KCGELHDSLQVFYEMTQKNSI-SWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFL 458
+CG + + VF M +K I SW S+IA A HG G A++ + EM G+ P ++F+
Sbjct: 316 RCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFI 375
Query: 459 SLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPE 518
SLLHACSHAGL+E+G ++ M R + + P EHY C+VD+ GR+G L++A +FI +P
Sbjct: 376 SLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPI 435
Query: 519 NRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGA 578
+VW+ LLGACS HG+ E+ + +L P +S VL++N Y+ GKWK+ A
Sbjct: 436 PPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASI 495
Query: 579 IKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDE-GYVPD 637
K M + + K S +E+ K + F G+K +L ++ LKDE GY P+
Sbjct: 496 RKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPE 555
Query: 638 KRCILYYLDQDKKD 651
LY +++++K+
Sbjct: 556 VASALYDVEEEEKE 569
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 258 bits (659), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 163/566 (28%), Positives = 272/566 (48%), Gaps = 82/566 (14%)
Query: 74 FDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGF 133
FD F WN+++S Y+K + +A+ LF++MP R+ VSW++MI+GF +N + D+
Sbjct: 128 FDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAV 187
Query: 134 RFFKQ---------------------MSESRTVYSRFDKAT---------LTTML----- 158
F++ +SE+ V ++ T++
Sbjct: 188 VLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQ 247
Query: 159 ------SACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEM 212
+ C + + HG F F + + N++I +Y K G R +FD+M
Sbjct: 248 RGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQM 307
Query: 213 IERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGR 272
+R+ ++W +I G ED LF++M PN R
Sbjct: 308 KDRDTISWNTMIDGYVHVSRMEDAFALFSEM------PN--------------------R 341
Query: 273 KIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNG 332
H W + ++ Y+ G++E A FE E VS I+ A+ +N
Sbjct: 342 DAHS--WNM-----------MVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNK 388
Query: 333 FEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSN 392
+EA+ +F R+ G + D + ++++L +L LG Q+H +++K P V N
Sbjct: 389 DYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVP-VHN 447
Query: 393 GLINMYSKCGELHDSLQVFYEMTQKNS-ISWNSVIAAFARHGDGSRALQFYEEMRVGGIA 451
LI MYS+CGE+ +S ++F EM K I+WN++I +A HG+ S AL + M+ GI
Sbjct: 448 ALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIY 507
Query: 452 PTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKN 511
P+ +TF+S+L+AC+HAGLV++ VSM +++ P+ EHY+ +V++ G +EA
Sbjct: 508 PSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMY 567
Query: 512 FIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGK 571
I +P VW ALL AC I+ + + AA+ + P SS P+VL+ N+Y+ G
Sbjct: 568 IITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGL 627
Query: 572 WKERAGAIKRMKEKGVAKEVGVSWIE 597
W E + M+ K + KE G SW++
Sbjct: 628 WDEASQVRMNMESKRIKKERGSSWVD 653
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 114/485 (23%), Positives = 213/485 (43%), Gaps = 69/485 (14%)
Query: 86 NSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTV 145
N L+ + G + +A +F+++ R+TV+WN+MISG+++ R+ + + F M +
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKR--- 100
Query: 146 YSRFDKATLTTMLS---ACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCF 202
D T TM+S +C G F +R + F R+ N +I+ Y K
Sbjct: 101 ----DVVTWNTMISGYVSCGGIRFLEEARKL----FDEMPSRDSFSWNTMISGYAKNRRI 152
Query: 203 CQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMAC 262
+ +F++M ERN V+W+A+I+G QN + + LF +M SP C
Sbjct: 153 GEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSP----------LC 202
Query: 263 SGVQALAEGRKIHGLLWKLGMQSDLC--------IESALMDLYSKCGSLEGAWQIFESAE 314
+ V L + ++ W LG L + L+ Y + G +E A +F+
Sbjct: 203 ALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIP 262
Query: 315 ELDG---------------VSLTVILVAFAQNGFEEEAIQIFTRI-----VTLGIEVDAN 354
+L G VS ++ A+ + G A +F ++ ++ +D
Sbjct: 263 DLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGY 322
Query: 355 M-VSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYE 413
+ VS + F + + +P + HS N +++ Y+ G + + F +
Sbjct: 323 VHVSRMEDAFALFSEMP-NRDAHSW-------------NMMVSGYASVGNVELARHYFEK 368
Query: 414 MTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKG 473
+K+++SWNS+IAA+ ++ D A+ + M + G P T SLL A + GLV
Sbjct: 369 TPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSAST--GLVNLR 426
Query: 474 MEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACS 533
+ + + P + ++ M R G + E++ + + R V+ W A++G +
Sbjct: 427 LGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYA 486
Query: 534 IHGDS 538
HG++
Sbjct: 487 FHGNA 491
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 151/298 (50%), Gaps = 34/298 (11%)
Query: 71 FFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMP---------------VRDTVS 115
+ S S R + ++ +N+L+ Y + G+++ A LFD++P ++ VS
Sbjct: 224 YGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVS 283
Query: 116 WNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHG 175
WNSMI +L+ D + F QM + T+ + TM+ DG + VSRM
Sbjct: 284 WNSMIKAYLKVGDVVSARLLFDQMKDRDTI-------SWNTMI---DG--YVHVSRMEDA 331
Query: 176 L-VFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYE 234
+F R+ N +++ Y G R F++ E++ V+W ++I+ +N+ Y+
Sbjct: 332 FALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYK 391
Query: 235 DGLRLFAQM--RGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESA 292
+ + LF +M G P+TLT L L A +G+ L G ++H ++ K + D+ + +A
Sbjct: 392 EAVDLFIRMNIEGEKPDPHTLTSL--LSASTGLVNLRLGMQMHQIVVKTVI-PDVPVHNA 448
Query: 293 LMDLYSKCGSLEGAWQIFESAE-ELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGI 349
L+ +YS+CG + + +IF+ + + + ++ ++ +A +G EA+ +F + + GI
Sbjct: 449 LITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGI 506
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%), Gaps = 17/123 (13%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQ--PPFFSFDSSRRNALFVWNSLLSMYSKCGELQ 99
L+SLLS NL LG +H ++K P + V N+L++MYS+CGE+
Sbjct: 412 LTSLLSASTGLVNLRLGMQMHQIVVKTVIPD-----------VPVHNALITMYSRCGEIM 460
Query: 100 DAIKLFDRMPV-RDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTML 158
++ ++FD M + R+ ++WN+MI G+ + + F M +S +Y T ++L
Sbjct: 461 ESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSM-KSNGIYP--SHITFVSVL 517
Query: 159 SAC 161
+AC
Sbjct: 518 NAC 520
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 258 bits (659), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 188/675 (27%), Positives = 310/675 (45%), Gaps = 114/675 (16%)
Query: 14 WVDSLKSK---APISQYPFPATSESVLNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPP 70
WV SL+++ AP S+ F + ES L S L C ++ G IH R++K
Sbjct: 14 WVISLQARCFSAP-SRTHFDFSGESSDTERALVSALGSCASSNDVTCGRQIHCRVLKS-- 70
Query: 71 FFSFDSSRRNALFVWNSLLSMYSKCG-------------------------------ELQ 99
DS+ ++ NS+L+MY+KC L
Sbjct: 71 --GLDSNG----YICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRRLW 124
Query: 100 DAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLS 159
DA+KLFD MP R VS+ ++I G+ +N + F++M R + ++ TL T++S
Sbjct: 125 DALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREM---RNLGIMLNEVTLATVIS 181
Query: 160 ACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVT 219
AC RM+ L E + V L+ Y C C R++FDEM ERN+VT
Sbjct: 182 ACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVT 241
Query: 220 WTAVISGLAQNELYEDGLRLFAQ-----------MRGGSVSPN----TLTYLSSLMAC-- 262
W +++G ++ L E LF Q M G + N L Y + ++ C
Sbjct: 242 WNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGM 301
Query: 263 --SGVQAL------------AEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQ 308
S V + ++G ++HG + K G +++ ++ Y+ ++ A Q
Sbjct: 302 KPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQ 361
Query: 309 IFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTR------------------------- 343
FE++ + S ++ F +NG E+A ++F +
Sbjct: 362 QFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLA 421
Query: 344 -------IVTLGIEVDA-NMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLI 395
I + ++ DA MVS + +G SL GK+ H + N ++ +I
Sbjct: 422 LHLFREMISSSQVKPDAITMVSVFSAISSLG-SLEEGKRAHDYLNFSTIPPNDNLTAAII 480
Query: 396 NMYSKCGELHDSLQVFYEMTQKNSIS---WNSVIAAFARHGDGSRALQFYEEMRVGGIAP 452
+MY+KCG + +L +F++ +S + WN++I A HG AL Y +++ I P
Sbjct: 481 DMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKP 540
Query: 453 TDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNF 512
+TF+ +L AC HAGLVE G + SM DH + P +HY C+VD+LG+AG L+EAK
Sbjct: 541 NSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEM 600
Query: 513 IEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKW 572
I+ +P V++W LL A HG+ E+ + AA +L P+ V+++N+Y+ G+W
Sbjct: 601 IKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRW 660
Query: 573 KERAGAIKRMKEKGV 587
++ A + M+ + V
Sbjct: 661 EDVALVREEMRTRDV 675
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 144/471 (30%), Positives = 251/471 (53%), Gaps = 4/471 (0%)
Query: 171 RMIHGLVFVGGFEREITVGNALI--TSYFKCGCFCQGRQVFDEM-IERNVVTWTAVISGL 227
R IH V + G + ++ N L+ + G + +FD + + W +I G
Sbjct: 22 RKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSDWNYLIRGF 81
Query: 228 AQNELYEDGLRLFAQMRGGSVS-PNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSD 286
+ + + + + +M SVS P+ T+ +L +C ++++ + +IHG + + G D
Sbjct: 82 SNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDD 141
Query: 287 LCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVT 346
+ ++L+ YS GS+E A ++F+ D VS V++ F+ G +A+ ++ R+
Sbjct: 142 AIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGN 201
Query: 347 LGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHD 406
G+ D+ + A+L ++L +G +H + FVSN LI+MY+KCG L +
Sbjct: 202 EGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLEN 261
Query: 407 SLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSH 466
++ VF M +++ ++WNS+I + HG G A+ F+ +M G+ P +TFL LL CSH
Sbjct: 262 AIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSH 321
Query: 467 AGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQ 526
GLV++G+E M+ L+P +HY C+VD+ GRAG L+ + I + ++W+
Sbjct: 322 QGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWR 381
Query: 527 ALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKG 586
LLG+C IH + E+G+ A +L+ ++ +VLM +IYSA + A K ++
Sbjct: 382 TLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHD 441
Query: 587 VAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDEGYVPD 637
+ G SWIEI QV FVV DK+HP++ +I+ EL ++ GY P+
Sbjct: 442 LQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILAGYKPE 492
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 115/239 (48%), Gaps = 5/239 (2%)
Query: 83 FVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSES 142
V SL+ YS G ++ A K+FD MPVRD VSWN MI F + +K+M
Sbjct: 143 IVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNE 202
Query: 143 RTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCF 202
D TL +LS+C ++ M+H + E + V NALI Y KCG
Sbjct: 203 GVC---GDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSL 259
Query: 203 CQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMAC 262
VF+ M +R+V+TW ++I G + + + F +M V PN +T+L L+ C
Sbjct: 260 ENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGC 319
Query: 263 SGVQALAEGRKIHGLL-WKLGMQSDLCIESALMDLYSKCGSLEGAWQ-IFESAEELDGV 319
S + EG + ++ + + ++ ++DLY + G LE + + I+ S+ D V
Sbjct: 320 SHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPV 378
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 257 bits (657), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 163/547 (29%), Positives = 272/547 (49%), Gaps = 25/547 (4%)
Query: 53 GNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRD 112
G+L G +IH ++Q + V SL+SMYSKCGEL+ A +LF + RD
Sbjct: 314 GDLVKGIAIHDYAVQQGLI--------GDVSVATSLMSMYSKCGELEIAEQLFINIEDRD 365
Query: 113 TVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRM 172
VSW++MI+ + + D F+ M ++ + + TLT++L C G S + +
Sbjct: 366 VVSWSAMIASYEQAGQHDEAISLFRDMMR---IHIKPNAVTLTSVLQGCAGVAASRLGKS 422
Query: 173 IHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNEL 232
IH E E+ A+I+ Y KCG F + F+ + ++ V + A+ G Q
Sbjct: 423 IHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGD 482
Query: 233 YEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESA 292
++ M+ V P++ T + L C+ A G ++G + K G S+ + A
Sbjct: 483 ANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHA 542
Query: 293 LMDLYSKCGSLEGAWQIFESAE-ELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEV 351
L+++++KC +L A +F+ E VS +++ + +G EEA+ F ++ +
Sbjct: 543 LINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQP 602
Query: 352 DANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVF 411
+A ++ ++L +G +HS +I+ F V N L++MY+KCG + S + F
Sbjct: 603 NAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCF 662
Query: 412 YEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVE 471
E++ K +SWN++++A+A HG S A+ + M+ + P V+FLS+L AC HAGLVE
Sbjct: 663 IEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVE 722
Query: 472 KGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGA 531
+G M H++ EHYAC+VD+LG+AGL EA + + V VW ALL +
Sbjct: 723 EGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNS 782
Query: 532 CSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEV 591
+H + + A QL+ P L + YS + + E + R+K K
Sbjct: 783 SRMHCNLWLSNAALCQLVKLEP-------LNPSHYSQDRRLGE-VNNVSRIK-----KVP 829
Query: 592 GVSWIEI 598
SWIE+
Sbjct: 830 ACSWIEV 836
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 130/459 (28%), Positives = 228/459 (49%), Gaps = 8/459 (1%)
Query: 82 LFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSE 141
+++ +L+ MY K +L A ++FD+M V+D V+WN+M+SG +N A F M
Sbjct: 135 VYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDM-- 192
Query: 142 SRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGC 201
R+ D +L ++ A E S V R +HGLV GF + G LI Y C
Sbjct: 193 -RSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSG--LIDMYCNCAD 249
Query: 202 FCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMA 261
VF+E+ ++ +W +++ A N +E+ L LF MR V N + S+L A
Sbjct: 250 LYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQA 309
Query: 262 CSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSL 321
+ V L +G IH + G+ D+ + ++LM +YSKCG LE A Q+F + E+ D VS
Sbjct: 310 AAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSW 369
Query: 322 TVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVL-GVFGVGTSLPLGKQIHSLII 380
+ ++ ++ Q G +EAI +F ++ + I+ +A +++VL G GV S LGK IH I
Sbjct: 370 SAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAAS-RLGKSIHCYAI 428
Query: 381 KKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQ 440
K + + +I+MY+KCG +L+ F + K+++++N++ + + GD ++A
Sbjct: 429 KADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFD 488
Query: 441 FYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDML 500
Y+ M++ G+ P T + +L C+ +G + H +++M
Sbjct: 489 VYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARG-SCVYGQIIKHGFDSECHVAHALINMF 547
Query: 501 GRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSE 539
+ L A + + + W ++ +HG +E
Sbjct: 548 TKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAE 586
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 125/432 (28%), Positives = 196/432 (45%), Gaps = 5/432 (1%)
Query: 86 NSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTV 145
N L++ YS + +FD + V WNSMI G+ R FF MSE + +
Sbjct: 37 NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGI 96
Query: 146 YSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQG 205
DK + T L AC G IH L+ G E ++ +G AL+ Y K
Sbjct: 97 DP--DKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSA 154
Query: 206 RQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGV 265
RQVFD+M ++VVTW ++SGLAQN L LF MR V + ++ + + A S +
Sbjct: 155 RQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKL 214
Query: 266 QALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVIL 325
+ R +HGL+ K G S L+D+Y C L A +FE D S ++
Sbjct: 215 EKSDVCRCLHGLVIKKGFI--FAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMM 272
Query: 326 VAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFS 385
A+A NGF EE +++F + + ++ ++ L L G IH +++
Sbjct: 273 AAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLI 332
Query: 386 QNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEM 445
+ V+ L++MYSKCGEL + Q+F + ++ +SW+++IA++ + G A+ + +M
Sbjct: 333 GDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDM 392
Query: 446 RVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGL 505
I P VT S+L C+ G + + E V+ M + G
Sbjct: 393 MRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKAD-IESELETATAVISMYAKCGR 451
Query: 506 LKEAKNFIEGLP 517
A E LP
Sbjct: 452 FSPALKAFERLP 463
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 145/467 (31%), Positives = 244/467 (52%), Gaps = 38/467 (8%)
Query: 171 RMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQN 230
+ IH + GF+ ++ + L+ + KCGC RQVFDE+ + + + +ISG ++
Sbjct: 54 KKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKH 113
Query: 231 ELYEDGLRLFAQMR--GGSVSPNTLTYL---SSLMACSGVQALAEGRKIHGLLWKLGMQS 285
L ++ L L +M G TL+ + S+ + + + R +H + K ++
Sbjct: 114 GLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVEL 173
Query: 286 DLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIV 345
D + +AL+D Y K G LE A +FE+ ++ + V T ++ + GF E+A +IF
Sbjct: 174 DDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTK 233
Query: 346 TLGIEVDANMV--------------------------------SAVLGVFGVGTSLPLGK 373
I V MV ++V+G V TS +G+
Sbjct: 234 VKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQ 293
Query: 374 QIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHG 433
Q+H+ I+K + + + L++MY+KCG ++D+ +VF +M +KN SW S+I + ++G
Sbjct: 294 QVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNG 353
Query: 434 DGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHY 493
+ AL+ + M+ I P VTFL L ACSH+GLV+KG E SM RD+ + P+ EHY
Sbjct: 354 NPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHY 413
Query: 494 ACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLI-LAA 552
AC+VD++GRAG L +A F +PE +W ALL +C++HG+ E+ AA +L L A
Sbjct: 414 ACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKLNA 473
Query: 553 PASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEID 599
++ ++N+Y++ KW + + MK + ++K +G SW D
Sbjct: 474 DKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSWTSED 520
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 120/454 (26%), Positives = 200/454 (44%), Gaps = 87/454 (19%)
Query: 58 GSSIHARIIK---QPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTV 114
G IHA IIK QP L + LL ++ KCG L A ++FD +P
Sbjct: 53 GKKIHADIIKTGFQPD-----------LNISIKLLILHLKCGCLSYARQVFDELPKPTLS 101
Query: 115 SWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFS-----SV 169
++N MISG+L++ ++MS S + D TL+ +L A + + S+
Sbjct: 102 AYNYMISGYLKHGLVKELLLLVQRMSYSG---EKADGYTLSMVLKASNSRGSTMILPRSL 158
Query: 170 SRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQ 229
R++H + E + + AL+ +Y K G R VF+ M + NVV T++ISG
Sbjct: 159 CRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMN 218
Query: 230 NELYEDGLRLF------------AQMRGGSVS--------------------PNTLTYLS 257
ED +F A + G S S PN T+ S
Sbjct: 219 QGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFAS 278
Query: 258 SLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELD 317
+ ACS + + G+++H + K G+ + + + S+L+D+Y+KCG + A ++F+ +E +
Sbjct: 279 VIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKN 338
Query: 318 GVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHS 377
S T ++ + +NG EEA+++FTR+ IE N V+ LG + HS
Sbjct: 339 VFSWTSMIDGYGKNGNPEEALELFTRMKEFRIE--PNYVT-FLGALSACS--------HS 387
Query: 378 LIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSR 437
++ K + E+ +S+Q Y M K + ++ R GD ++
Sbjct: 388 GLVDKGY------------------EIFESMQRDYSMKPKME-HYACIVDLMGRAGDLNK 428
Query: 438 ALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVE 471
A +F M P + +LL +C+ G VE
Sbjct: 429 AFEFARAMPE---RPDSDIWAALLSSCNLHGNVE 459
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 134/317 (42%), Gaps = 61/317 (19%)
Query: 271 GRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQ 330
G+KIH + K G Q DL I L+ L+ KCG L A Q+F+ + + ++ + +
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 331 NGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVF---GVGTSLP--LGKQIHSLIIKKNFS 385
+G +E + + R+ G + D +S VL G LP L + +H+ IIK +
Sbjct: 113 HGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVE 172
Query: 386 QNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSIS------------------------ 421
+ + L++ Y K G+L + VF M +N +
Sbjct: 173 LDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTT 232
Query: 422 -------WNSVIAAFARHGD-GSRALQFYEEMRVGGIAPTDVTFLSLLHACS-------- 465
+N+++ F+R G+ R++ Y M+ G P TF S++ ACS
Sbjct: 233 KVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVG 292
Query: 466 ---HAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGV 522
HA +++ G+ + M + ++DM + G + +A+ + + E + V
Sbjct: 293 QQVHAQIMKSGVYTHIKMG------------SSLLDMYAKCGGINDARRVFDQMQE-KNV 339
Query: 523 LVWQALLGACSIHGDSE 539
W +++ +G+ E
Sbjct: 340 FSWTSMIDGYGKNGNPE 356
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 253 bits (646), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 155/534 (29%), Positives = 264/534 (49%), Gaps = 9/534 (1%)
Query: 74 FDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGF 133
FD WN L K G L +A+ LFD MP RD VSWN+MISG + + G
Sbjct: 62 FDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGI 121
Query: 134 RFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFER-EITVGNAL 192
R F M + F + L ++++ E IHG G R + V N++
Sbjct: 122 RVFFDMQRWEIRPTEFTFSILASLVTCVRHGE------QIHGNAICSGVSRYNLVVWNSV 175
Query: 193 ITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNT 252
+ Y + G F VF M +R+VV+W +I + + E L F MR + P+
Sbjct: 176 MDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDE 235
Query: 253 LTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFES 312
T + CS ++ L++G++ L K+G S+ + A +D++SKC L+ + ++F
Sbjct: 236 YTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRE 295
Query: 313 AEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLG 372
E+ D V ++ +++ + E+A+++F +T + D S+VL L G
Sbjct: 296 LEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMN-AVMLDHG 354
Query: 373 KQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARH 432
+HSL+IK F + V+ L+ MY K G + ++ VF + K+ I WN+VI AR+
Sbjct: 355 ADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARN 414
Query: 433 GDGSRALQFYEEMRVG-GIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSE 491
+L + ++ + + P VT + +L AC +AG V +G++ SM + H ++P +E
Sbjct: 415 SRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNE 474
Query: 492 HYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILA 551
HYAC++++L R G++ EAK+ + +P +W+ +L A GD+ + + A ++ +
Sbjct: 475 HYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLES 534
Query: 552 APASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSF 605
P SS P++++ IY +W+ M E + G S I I+ V SF
Sbjct: 535 EPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSF 588
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 160/330 (48%), Gaps = 39/330 (11%)
Query: 168 SVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERN----------- 216
++++++H + GF R GN + YFK G Q+FD++ ++N
Sbjct: 21 TLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGL 80
Query: 217 --------------------VVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTY- 255
VV+W +ISGL +E G+R+F M+ + P T+
Sbjct: 81 FKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFS 140
Query: 256 -LSSLMACSGVQALAEGRKIHGLLWKLGM-QSDLCIESALMDLYSKCGSLEGAWQIFESA 313
L+SL+ C + G +IHG G+ + +L + +++MD+Y + G + A +F +
Sbjct: 141 ILASLVTC-----VRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTM 195
Query: 314 EELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGK 373
E+ D VS ++++ + +G +E A+ F + + I+ D VS V+ + L GK
Sbjct: 196 EDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGK 255
Query: 374 QIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHG 433
Q +L IK F N V I+M+SKC L DS+++F E+ + +S+ NS+I +++ H
Sbjct: 256 QALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHC 315
Query: 434 DGSRALQFYEEMRVGGIAPTDVTFLSLLHA 463
G AL+ + + P TF S+L +
Sbjct: 316 CGEDALRLFILAMTQSVRPDKFTFSSVLSS 345
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 42/227 (18%)
Query: 365 VGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNS 424
+ S L K +H+ +++ F + + N + +Y K G + ++LQ+F ++ KN+I+WN
Sbjct: 16 LSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNV 75
Query: 425 VIAAFARHGDGSRALQFYEEM----------RVGG---------------------IAPT 453
+ ++G + AL ++EM + G I PT
Sbjct: 76 CLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPT 135
Query: 454 DVTF--LSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKN 511
+ TF L+ L C G G ++R + + S V+DM R G+ A +
Sbjct: 136 EFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNS-----VMDMYRRLGVFDYALS 190
Query: 512 FIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAP 558
+ E+R V+ W L+ +CS G+ E+ A DQ L P
Sbjct: 191 VFLTM-EDRDVVSWNCLILSCSDSGNKEV---ALDQFWLMREMEIQP 233
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 252 bits (643), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 170/569 (29%), Positives = 271/569 (47%), Gaps = 55/569 (9%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDA 101
L LL V G G + L +H + K F S+ R + NSL+ Y L+DA
Sbjct: 58 LVHLLRVSGNYGYVSLCRQLHGYVTKH----GFVSNTRLS----NSLMRFYKTSDSLEDA 109
Query: 102 IKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSAC 161
K+FD MP D +SWNS++SG++++ F G F ++ S + F + T L+AC
Sbjct: 110 HKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEF---SFTAALAAC 166
Query: 162 DGPEFSSVSRMIHGLVFVGGFER-EITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTW 220
S + IH + G E+ + VGN LI Y KCG VF M E++ V+W
Sbjct: 167 ARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSW 226
Query: 221 TAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWK 280
A+++ ++N E GL F QM +P+T+TY
Sbjct: 227 NAIVASCSRNGKLELGLWFFHQMP----NPDTVTY------------------------- 257
Query: 281 LGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQI 340
+ L+D + K G A+Q+ + S IL + + EA +
Sbjct: 258 ----------NELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEF 307
Query: 341 FTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSK 400
FT++ + G+ D +S VL +P G IH+ K V++ LI+MYSK
Sbjct: 308 FTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSK 367
Query: 401 CGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGG-IAPTDVTFLS 459
CG L + +F+ M +KN I WN +I+ +AR+GD A++ + +++ + P TFL+
Sbjct: 368 CGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLN 427
Query: 460 LLHACSHAGL-VEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPE 518
LL CSH + +E + + M ++R+ P EH ++ +G+ G + +AK I+
Sbjct: 428 LLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGF 487
Query: 519 NRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAP--HVLMANIYSAEGKWKERA 576
+ W+ALLGACS D + K A ++I A +++M+N+Y+ +W+E
Sbjct: 488 GYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVG 547
Query: 577 GAIKRMKEKGVAKEVGVSWIEIDKQVSSF 605
K M+E GV KEVG SWI+ + SS+
Sbjct: 548 QIRKIMRESGVLKEVGSSWIDSRTKCSSY 576
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 180/405 (44%), Gaps = 72/405 (17%)
Query: 150 DKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVF 209
D + L +L + S+ R +HG V GF + N+L+ Y +VF
Sbjct: 54 DASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVF 113
Query: 210 DEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALA 269
DEM + +V++W +++SG Q+ +++G+ LF ++ V PN ++ ++L AC+ +
Sbjct: 114 DEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSP 173
Query: 270 EGRKIHGLLWKLGMQS-DLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAF 328
G IH L KLG++ ++ + + L+D+Y KCG ++ A +F+ EE D VS I+ +
Sbjct: 174 LGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASC 233
Query: 329 AQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNP 388
++NG E + F + +P + +
Sbjct: 234 SRNGKLELGLWFFHQ-------------------------MP--------------NPDT 254
Query: 389 FVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVG 448
N LI+ + K G+ +++ QV +M NS SWN+++ + A +F+ +M
Sbjct: 255 VTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSS 314
Query: 449 GIAPTDVTFL---------------SLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHY 493
G+ + + SL+HAC+H + D R+ S
Sbjct: 315 GVRFDEYSLSIVLAAVAALAVVPWGSLIHACAH------------KLGLDSRVVVAS--- 359
Query: 494 ACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDS 538
++DM + G+LK A+ +P + ++VW ++ + +GDS
Sbjct: 360 -ALIDMYSKCGMLKHAELMFWTMPR-KNLIVWNEMISGYARNGDS 402
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 146/338 (43%), Gaps = 49/338 (14%)
Query: 7 FNTHLPSWVDSLKSKAPISQYPFPATSESVLNHAHLSSLLSVCGRDGNLHLGSSIHARII 66
+N+ + +V S + + I + S+ N ++ L+ C R LG+ IH++++
Sbjct: 124 WNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLV 183
Query: 67 KQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRN 126
K + + V N L+ MY KCG + DA+ +F M +DTVSWN++++ RN
Sbjct: 184 KL-------GLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRN 236
Query: 127 RDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREI 186
+ G FF QM TV
Sbjct: 237 GKLELGLWFFHQMPNPDTV----------------------------------------- 255
Query: 187 TVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGG 246
N LI ++ K G F QV +M N +W +++G +E + F +M
Sbjct: 256 -TYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSS 314
Query: 247 SVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGA 306
V + + L A + + + G IH KLG+ S + + SAL+D+YSKCG L+ A
Sbjct: 315 GVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHA 374
Query: 307 WQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRI 344
+F + + + ++ +A+NG EAI++F ++
Sbjct: 375 ELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQL 412
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 113/240 (47%), Gaps = 24/240 (10%)
Query: 320 SLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLI 379
S + I+ A A+ G ++ ++ G + DA+ + +L V G + L +Q+H +
Sbjct: 23 SWSTIVPALARFG-SIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYV 81
Query: 380 IKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRAL 439
K F N +SN L+ Y L D+ +VF EM + ISWNS+++ + + G +
Sbjct: 82 TKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGI 141
Query: 440 QFYEEMRVGGIAPTDVTF-----------LSLLHACSHAGLVEKGMEFLVSMTRDHRLSP 488
+ E+ + P + +F LS L AC H+ LV+ G+E + +
Sbjct: 142 CLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGN----- 196
Query: 489 RSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQL 548
C++DM G+ G + +A + + E + + W A++ +CS +G E+G + Q+
Sbjct: 197 ------CLIDMYGKCGFMDDAVLVFQHM-EEKDTVSWNAIVASCSRNGKLELGLWFFHQM 249
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 134/302 (44%), Gaps = 20/302 (6%)
Query: 7 FNTHLPSWVDSLKSKAPISQYPFPATSESVLNHAHLSSLLSVCGRDGNLHLGSSIHARII 66
+NT L +V+S KS + +S + LS +L+ + GS IHA
Sbjct: 288 WNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAH 347
Query: 67 KQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRN 126
K DS + V ++L+ MYSKCG L+ A +F MP ++ + WN MISG+ RN
Sbjct: 348 K----LGLDSR----VVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARN 399
Query: 127 RDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREI 186
D + F Q+ + R + + D+ T +L+ C E + + + + + +
Sbjct: 400 GDSIEAIKLFNQLKQER--FLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKP 457
Query: 187 TVGN--ALITSYFKCGCFCQGRQVFDEM-IERNVVTWTAVISGLAQNELYEDGLRLFAQM 243
+V + +LI + + G Q +QV E + V W A++ + + + + A+M
Sbjct: 458 SVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKM 517
Query: 244 -RGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIE--SALMDLYSKC 300
G + Y+ S + A E + G + K+ +S + E S+ +D +KC
Sbjct: 518 IELGDADKDEYLYI----VMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWIDSRTKC 573
Query: 301 GS 302
S
Sbjct: 574 SS 575
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 252 bits (643), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 148/524 (28%), Positives = 273/524 (52%), Gaps = 45/524 (8%)
Query: 157 MLSACDGPEFSSVSRMIHGLVFVGGFER--EITVGNALITSYFKCGCFCQGRQVFDE--M 212
+L C F + +H ++ G ++ + NAL Y G +++FDE +
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 213 IERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGR 272
E++ V WT ++S ++ L + ++LF +MR V + ++ + C+ ++ L +
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQ 131
Query: 273 KIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVIL------- 325
+ HG+ K+G+ + + + +ALMD+Y KCG + +IFE EE VS TV+L
Sbjct: 132 QGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWE 191
Query: 326 ------------------------VAFAQNGFEEEAIQIFTRIV-TLGIEVDANMVSAVL 360
+ GF E +++ +V G ++ + ++L
Sbjct: 192 GLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSML 251
Query: 361 GVFGVGTSLPLGKQIHSLIIKKNFS-------QNPFVSNGLINMYSKCGELHDSLQVFYE 413
+L +G+ +H +KK + V L++MY+KCG + S+ VF
Sbjct: 252 SACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRL 311
Query: 414 MTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKG 473
M ++N ++WN++ + A HG G + + +M + + P D+TF ++L ACSH+G+V++G
Sbjct: 312 MRKRNVVTWNALFSGLAMHGKGRMVIDMFPQM-IREVKPDDLTFTAVLSACSHSGIVDEG 370
Query: 474 MEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACS 533
S+ R + L P+ +HYAC+VD+LGRAGL++EA+ + +P +V +LLG+CS
Sbjct: 371 WRCFHSL-RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCS 429
Query: 534 IHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGV 593
+HG E+ + +LI +P ++ +LM+N+Y AEG+ G ++++G+ K G+
Sbjct: 430 VHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGL 489
Query: 594 SWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDEGYVPD 637
S I ++ V F GD+ HP+ I+L+L+ +++ ++ GYVPD
Sbjct: 490 SSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPD 533
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 104/459 (22%), Positives = 193/459 (42%), Gaps = 68/459 (14%)
Query: 37 LNHAHLSSLLSVCGRDGNLHLGSSIHARI----IKQPPFFSFDSSRRNALFVWNSLLSMY 92
L++ + LL C L G +HA + +K+ P ++ N+L Y
Sbjct: 4 LSYQKVRLLLRHCAHRSFLRPGKELHAVLTTSGLKKAP----------RSYLSNALFQFY 53
Query: 93 SKCGELQDAIKLFDRMPV--RDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFD 150
+ GE+ A KLFD +P+ +D V W +++S F R + F +M R D
Sbjct: 54 ASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRV---EID 110
Query: 151 KATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFD 210
++ + C E ++ HG+ G + V NAL+ Y KCG + +++F+
Sbjct: 111 DVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFE 170
Query: 211 EMIERNVVTWTAVISGLAQNELYEDGLRLFAQM--------------------------- 243
E+ E++VV+WT V+ + + E E G +F +M
Sbjct: 171 ELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLEL 230
Query: 244 ------RGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQ-------SDLCIE 290
R G N +T S L AC+ L GR +H K M D+ +
Sbjct: 231 LAEMVFRCGH-GLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVG 289
Query: 291 SALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIE 350
+AL+D+Y+KCG+++ + +F + + V+ + A +G I +F +++ ++
Sbjct: 290 TALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIR-EVK 348
Query: 351 VDANMVSAVLGVFGVGTSLPLG-KQIHSLIIKKNFSQNPFVSN--GLINMYSKCGELHDS 407
D +AVL + G + HSL + + P V + ++++ + G + ++
Sbjct: 349 PDDLTFTAVLSACSHSGIVDEGWRCFHSL---RFYGLEPKVDHYACMVDLLGRAGLIEEA 405
Query: 408 LQVFYEM-TQKNSISWNSVIAAFARHGDGSRALQFYEEM 445
+ EM N + S++ + + HG A + E+
Sbjct: 406 EILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKREL 444
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 147/498 (29%), Positives = 259/498 (52%), Gaps = 19/498 (3%)
Query: 104 LFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQ----MSESRTVYSRFDKATLTTMLS 159
+F+R+P T WN +I G+ F FF+ M RT +R D+ T ++
Sbjct: 65 VFERVPSPGTYLWNHLIKGY------SNKFLFFETVSILMRMMRTGLARPDEYTFPLVMK 118
Query: 160 ACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVT 219
C V +HGLV GF++++ VG + + Y KC R+VF EM ERN V+
Sbjct: 119 VCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVS 178
Query: 220 WTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLW 279
WTA++ ++ E+ +F M ++ + L + SG L +K+ +
Sbjct: 179 WTALVVAYVKSGELEEAKSMFDLMPERNL--GSWNALVDGLVKSG--DLVNAKKLFDEMP 234
Query: 280 KLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQ 339
K D+ ++++D Y+K G + A +FE A +D + + +++ +AQNG EA +
Sbjct: 235 K----RDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFK 290
Query: 340 IFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKK-NFSQNPFVSNGLINMY 398
+F+ + ++ D ++ ++ L +++ S + ++ N + +V LI+M
Sbjct: 291 VFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMN 350
Query: 399 SKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFL 458
+KCG + + ++F EM Q++ +S+ S++ A HG GS A++ +E+M GI P +V F
Sbjct: 351 AKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFT 410
Query: 459 SLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPE 518
+L C + LVE+G+ + M + + + +HY+C+V++L R G LKEA I+ +P
Sbjct: 411 VILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPF 470
Query: 519 NRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGA 578
W +LLG CS+HG++E+ + A L P S+ +VL++NIY+A +W + A
Sbjct: 471 EAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHL 530
Query: 579 IKRMKEKGVAKEVGVSWI 596
+M E G+ K G SWI
Sbjct: 531 RDKMNENGITKICGRSWI 548
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 250 bits (638), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 147/452 (32%), Positives = 240/452 (53%), Gaps = 11/452 (2%)
Query: 207 QVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSP-NTLTYLSSLMACSGV 265
+VF + + + +I + ++ +G RLF +R S P N L+ +L C
Sbjct: 67 RVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKS 126
Query: 266 QALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVIL 325
L G +IHG ++ G SD + + LMDLYS C + A ++F+ + D VS V+
Sbjct: 127 GDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLF 186
Query: 326 VAFAQNGFEEEAIQIFTRIVTLGIEVDANM----VSAVLGVFGVGT--SLPLGKQIHSLI 379
+ +N + + +F ++ +VD + V+ +L + +L GKQ+H I
Sbjct: 187 SCYLRNKRTRDVLVLFDKMKN---DVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFI 243
Query: 380 IKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRAL 439
+ S +SN L++MYS+CG + + QVFY M ++N +SW ++I+ A +G G A+
Sbjct: 244 DENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAI 303
Query: 440 QFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSM-TRDHRLSPRSEHYACVVD 498
+ + EM GI+P + T LL ACSH+GLV +GM F M + + ++ P HY CVVD
Sbjct: 304 EAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVD 363
Query: 499 MLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAP 558
+LGRA LL +A + I+ + +W+ LLGAC +HGD E+G+ LI +
Sbjct: 364 LLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGD 423
Query: 559 HVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADII 618
+VL+ N YS GKW++ MKEK + + G S IE+ V F+V D HP+ + I
Sbjct: 424 YVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEI 483
Query: 619 FLELSRLLKHLKDEGYVPDKRCILYYLDQDKK 650
+ L+ + + LK GYV + L+ L+ +++
Sbjct: 484 YKMLAEINQQLKIAGYVAEITSELHNLESEEE 515
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 154/346 (44%), Gaps = 12/346 (3%)
Query: 46 LSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLF 105
L C + G+L G IH +I F DS + +L+ +YS C DA K+F
Sbjct: 120 LKCCIKSGDLLGGLQIHGKIFSDG--FLSDS------LLMTTLMDLYSTCENSTDACKVF 171
Query: 106 DRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPE 165
D +P RDTVSWN + S +LRN+ F +M + D T L AC
Sbjct: 172 DEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLG 231
Query: 166 FSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVIS 225
+ +H + G + + N L++ Y +CG + QVF M ERNVV+WTA+IS
Sbjct: 232 ALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALIS 291
Query: 226 GLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLW--KLGM 283
GLA N ++ + F +M +SP T L ACS +AEG + + +
Sbjct: 292 GLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKI 351
Query: 284 QSDLCIESALMDLYSKCGSLEGAWQIFESAE-ELDGVSLTVILVAFAQNGFEEEAIQIFT 342
+ +L ++DL + L+ A+ + +S E + D +L A +G E ++ +
Sbjct: 352 KPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVIS 411
Query: 343 RIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNP 388
++ L E + V +L + ++ SL+ +K P
Sbjct: 412 HLIELKAEEAGDYV-LLLNTYSTVGKWEKVTELRSLMKEKRIHTKP 456
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 250 bits (638), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 133/448 (29%), Positives = 246/448 (54%), Gaps = 2/448 (0%)
Query: 205 GRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSG 264
R +F+ M E ++V + ++ G ++ + LF ++ + P+ T+ S L AC+
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 265 VQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVI 324
+AL EGR++H L KLG+ ++ + L+++Y++C ++ A +F+ E V +
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAM 201
Query: 325 LVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNF 384
+ +A+ EA+ +F + ++ + + +VL + SL LGK IH K +F
Sbjct: 202 ITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSF 261
Query: 385 SQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEE 444
+ V+ LI+M++KCG L D++ +F +M K++ +W+++I A+A HG +++ +E
Sbjct: 262 CKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFER 321
Query: 445 MRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAG 504
MR + P ++TFL LL+ACSH G VE+G ++ M + P +HY +VD+L RAG
Sbjct: 322 MRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAG 381
Query: 505 LLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMAN 564
L++A FI+ LP + ++W+ LL ACS H + ++ + ++++ + +V+++N
Sbjct: 382 NLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSN 441
Query: 565 IYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSR 624
+Y+ KW+ K MK++ K G S IE++ V F GD + + L
Sbjct: 442 LYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDE 501
Query: 625 LLKHLKDEGYVPDKRCILY--YLDQDKK 650
++K LK GYVPD +++ DQ+K+
Sbjct: 502 MVKELKLSGYVPDTSMVVHANMNDQEKE 529
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 166/341 (48%), Gaps = 15/341 (4%)
Query: 101 AIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSA 160
A LF+ M D V +NSM G+ R + F F ++ E + D T ++L A
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILP---DNYTFPSLLKA 138
Query: 161 CDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTW 220
C + R +H L G + + V LI Y +C R VFD ++E VV +
Sbjct: 139 CAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCY 198
Query: 221 TAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWK 280
A+I+G A+ + L LF +M+G + PN +T LS L +C+ + +L G+ IH K
Sbjct: 199 NAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKK 258
Query: 281 LGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQI 340
+ + +AL+D+++KCGSL+ A IFE D + + ++VA+A +G E+++ +
Sbjct: 259 HSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLM 318
Query: 341 FTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSN--GLINMY 398
F R+ + ++ D +L + G++ S ++ K F P + + ++++
Sbjct: 319 FERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSK-FGIVPSIKHYGSMVDLL 377
Query: 399 SKCGELHDSLQVFYEMTQKNSIS-----WNSVIAAFARHGD 434
S+ G L D+ YE K IS W ++AA + H +
Sbjct: 378 SRAGNLEDA----YEFIDKLPISPTPMLWRILLAACSSHNN 414
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 133/269 (49%), Gaps = 12/269 (4%)
Query: 44 SLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIK 103
SLL C L G +H +K D + ++V +L++MY++C ++ A
Sbjct: 134 SLLKACAVAKALEEGRQLHCLSMK----LGLDDN----VYVCPTLINMYTECEDVDSARC 185
Query: 104 LFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDG 163
+FDR+ V +N+MI+G+ R + F++M Y + ++ TL ++LS+C
Sbjct: 186 VFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGK---YLKPNEITLLSVLSSCAL 242
Query: 164 PEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAV 223
+ + IH F + + V ALI + KCG +F++M ++ W+A+
Sbjct: 243 LGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAM 302
Query: 224 ISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHG-LLWKLG 282
I A + E + +F +MR +V P+ +T+L L ACS + EGRK ++ K G
Sbjct: 303 IVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFG 362
Query: 283 MQSDLCIESALMDLYSKCGSLEGAWQIFE 311
+ + +++DL S+ G+LE A++ +
Sbjct: 363 IVPSIKHYGSMVDLLSRAGNLEDAYEFID 391
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 115/239 (48%), Gaps = 2/239 (0%)
Query: 301 GSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVL 360
S+ A +FE+ E D V + +++ E +F I+ GI D ++L
Sbjct: 77 SSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLL 136
Query: 361 GVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSI 420
V +L G+Q+H L +K N +V LINMY++C ++ + VF + + +
Sbjct: 137 KACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVV 196
Query: 421 SWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSM 480
+N++I +AR + AL + EM+ + P ++T LS+L +C+ G ++ G +++
Sbjct: 197 CYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLG-KWIHKY 255
Query: 481 TRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSE 539
+ H + ++DM + G L +A + E + + W A++ A + HG +E
Sbjct: 256 AKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKM-RYKDTQAWSAMIVAYANHGKAE 313
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 66/124 (53%), Gaps = 11/124 (8%)
Query: 38 NHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGE 97
N L S+LS C G+L LG IH + K+ F + + V +L+ M++KCG
Sbjct: 229 NEITLLSVLSSCALLGSLDLGKWIH-KYAKKHSFCKY-------VKVNTALIDMFAKCGS 280
Query: 98 LQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTM 157
L DA+ +F++M +DT +W++MI + + + F++M R+ + D+ T +
Sbjct: 281 LDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERM---RSENVQPDEITFLGL 337
Query: 158 LSAC 161
L+AC
Sbjct: 338 LNAC 341
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 249 bits (635), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 158/518 (30%), Positives = 254/518 (49%), Gaps = 39/518 (7%)
Query: 171 RMIHGLVFVGGFEREITVGNALITSYFKCGCFCQ--GRQVFDEMIERNVVTWTAVISGLA 228
+ IHG V G ++ + LI + K G R+V + + RN WTAVI G A
Sbjct: 66 KQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYA 125
Query: 229 QNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLC 288
+++ + ++ MR ++P + T+ + L AC ++ L GR+ H ++L +
Sbjct: 126 IEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVY 185
Query: 289 IESALMDLYSKC-------------------------------GSLEGAWQIFESAEELD 317
+ + ++D+Y KC G++E A ++FES D
Sbjct: 186 VGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKD 245
Query: 318 GVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHS 377
V+ T ++ FAQN +EA++ F R+ GI D V+ + + +
Sbjct: 246 MVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQ 305
Query: 378 LIIKKNFSQNPFVSNG--LINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDG 435
+ K +S + V G LI+MYSKCG + +++ VF M KN +++S+I A HG
Sbjct: 306 IAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRA 365
Query: 436 SRALQFYEEMRVGG-IAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYA 494
AL + M I P VTF+ L ACSH+GLV++G + SM + + P +HY
Sbjct: 366 QEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYT 425
Query: 495 CVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPA 554
C+VD+LGR G L+EA I+ + VW ALLGAC IH + E+ + AA+ L P
Sbjct: 426 CMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPD 485
Query: 555 SSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDK--QVSSFVVGDKLH 612
++L++N+Y++ G W K +KEKG+ K VSW+ +DK Q+ F G+ H
Sbjct: 486 IIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWV-VDKNGQMHKFFPGNLNH 544
Query: 613 PQADIIFLELSRLLKHLKDEGYVPDKRCILYYLDQDKK 650
P ++ I +L L++ L GY PD + Y + + K
Sbjct: 545 PMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAK 582
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 147/298 (49%), Gaps = 30/298 (10%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPFF----------------SFDSSRR------ 79
S+LL CG +L+LG HA+ + F S D +R+
Sbjct: 152 FSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMP 211
Query: 80 -NALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQ 138
+ W L++ Y++ G ++ A +LF+ +P +D V+W +M++GF +N +F +
Sbjct: 212 ERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDR 271
Query: 139 MSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGF--EREITVGNALITSY 196
M +S R D+ T+ +SAC S + + G+ + +G+ALI Y
Sbjct: 272 MEKSGI---RADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMY 328
Query: 197 FKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGS-VSPNTLTY 255
KCG + VF M +NV T++++I GLA + ++ L LF M + + PNT+T+
Sbjct: 329 SKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTF 388
Query: 256 LSSLMACSGVQALAEGRKIHGLLWK-LGMQSDLCIESALMDLYSKCGSLEGAWQIFES 312
+ +LMACS + +GR++ +++ G+Q + ++DL + G L+ A ++ ++
Sbjct: 389 VGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKT 446
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 136/476 (28%), Positives = 251/476 (52%), Gaps = 32/476 (6%)
Query: 208 VFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQA 267
+F ++ N+ + +I + + QM + P+ +T+ + A S ++
Sbjct: 73 IFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMEC 132
Query: 268 LAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIF----------------- 310
+ G + H + + G Q+D+ +E++L+ +Y+ CG + A +IF
Sbjct: 133 VLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAG 192
Query: 311 -------ESAEEL-------DGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMV 356
E+A E+ + + ++++ +A+N E+AI +F + G+ + ++
Sbjct: 193 YCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVM 252
Query: 357 SAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQ 416
+V+ +L G++ + ++K + + N + L++M+ +CG++ ++ VF + +
Sbjct: 253 VSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPE 312
Query: 417 KNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEF 476
+S+SW+S+I A HG +A+ ++ +M G P DVTF ++L ACSH GLVEKG+E
Sbjct: 313 TDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEI 372
Query: 477 LVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHG 536
+M +DH + PR EHY C+VDMLGRAG L EA+NFI + + ALLGAC I+
Sbjct: 373 YENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYK 432
Query: 537 DSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWI 596
++E+ + + LI P S +VL++NIY+ G+W + MKEK V K G S I
Sbjct: 433 NTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLI 492
Query: 597 EIDKQVSSFVVG-DKLHPQADIIFLELSRLLKHLKDEGYVPDKRCILYYLDQDKKD 651
EID +++ F +G D+ HP+ I + +L ++ GY + + +D+++K+
Sbjct: 493 EIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKE 548
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 170/377 (45%), Gaps = 39/377 (10%)
Query: 74 FDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGF 133
F +SR AL V +S + + L A +F ++ + +N +I F + F
Sbjct: 45 FVASRLLALCVDDSTFNKPTNL--LGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAF 102
Query: 134 RFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALI 193
F+ QM +SR D T ++ A E V H + GF+ ++ V N+L+
Sbjct: 103 GFYTQMLKSRIWP---DNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLV 159
Query: 194 TSYFKCG---------------------------CFC----QGRQVFDEMIERNVVTWTA 222
Y CG C C R++FDEM RN+ TW+
Sbjct: 160 HMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSI 219
Query: 223 VISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLG 282
+I+G A+N +E + LF M+ V N +S + +C+ + AL G + + + K
Sbjct: 220 MINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSH 279
Query: 283 MQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFT 342
M +L + +AL+D++ +CG +E A +FE E D +S + I+ A +G +A+ F+
Sbjct: 280 MTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFS 339
Query: 343 RIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSN--GLINMYSK 400
++++LG +AVL G + G +I+ +KK+ P + + +++M +
Sbjct: 340 QMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYE-NMKKDHGIEPRLEHYGCIVDMLGR 398
Query: 401 CGELHDSLQVFYEMTQK 417
G+L ++ +M K
Sbjct: 399 AGKLAEAENFILKMHVK 415
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 11/138 (7%)
Query: 24 ISQYPFPATSESVLNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALF 83
I + F V N + S++S C G L G + ++K S L
Sbjct: 234 IDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVK--------SHMTVNLI 285
Query: 84 VWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESR 143
+ +L+ M+ +CG+++ AI +F+ +P D++SW+S+I G + +F QM S
Sbjct: 286 LGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMI-SL 344
Query: 144 TVYSRFDKATLTTMLSAC 161
R T T +LSAC
Sbjct: 345 GFIPR--DVTFTAVLSAC 360
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 156/536 (29%), Positives = 268/536 (50%), Gaps = 13/536 (2%)
Query: 101 AIKLFDRMPVRD-TVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLS 159
A KLFD+ P RD + NSMI +L R + F ++ + + T ++ D T TT+
Sbjct: 29 ARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKE-TCFAP-DNFTFTTLTK 86
Query: 160 ACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVT 219
+C +H ++ GF ++ V ++ Y K G R FDEM R+ V+
Sbjct: 87 SCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVS 146
Query: 220 WTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLW 279
WTA+ISG + + +LF QM + + Y + + + R+ L+
Sbjct: 147 WTALISGYIRCGELDLASKLFDQM---PHVKDVVIYNAMMDGFVKSGDMTSARR----LF 199
Query: 280 KLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQ 339
+ + ++ Y ++ A ++F++ E + VS ++ + QN +E I+
Sbjct: 200 DEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIR 259
Query: 340 IFTRI-VTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMY 398
+F + T ++ D + +VL +L LG+ H + +K + V +++MY
Sbjct: 260 LFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMY 319
Query: 399 SKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFL 458
SKCGE+ + ++F EM +K SWN++I +A +G+ AL + M + P ++T L
Sbjct: 320 SKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE-KPDEITML 378
Query: 459 SLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPE 518
+++ AC+H GLVE+G ++ M R+ L+ + EHY C+VD+LGRAG LKEA++ I +P
Sbjct: 379 AVITACNHGGLVEEGRKWFHVM-REMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPF 437
Query: 519 NRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGA 578
++ + L AC + D E + + + P + +VL+ N+Y+A+ +W +
Sbjct: 438 EPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMV 497
Query: 579 IKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDEGY 634
M++ KEVG S IEI+ VS F+ GD HP I L L LL H+ +E Y
Sbjct: 498 KNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDLLMHMNEEKY 553
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 192/401 (47%), Gaps = 25/401 (6%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDA 101
++L C ++ G +H++I + F F + ++V ++ MY+K G++ A
Sbjct: 81 FTTLTKSCSLSMCVYQGLQLHSQIWR----FGFCAD----MYVSTGVVDMYAKFGKMGCA 132
Query: 102 IKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSAC 161
FD MP R VSW ++ISG++R + D + F QM + V A + + +
Sbjct: 133 RNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVV--IYNAMMDGFVKSG 190
Query: 162 DGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWT 221
D +S R+ + + + +I Y R++FD M ERN+V+W
Sbjct: 191 D---MTSARRLFDEMT-----HKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWN 242
Query: 222 AVISGLAQNELYEDGLRLFAQMRG-GSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWK 280
+I G QN+ ++G+RLF +M+ S+ P+ +T LS L A S AL+ G H + +
Sbjct: 243 TMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQR 302
Query: 281 LGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQI 340
+ + + +A++D+YSKCG +E A +IF+ E S ++ +A NG A+ +
Sbjct: 303 KKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDL 362
Query: 341 FTRIVTLGIEVDANMVS--AVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMY 398
F VT+ IE + ++ AV+ G + G++ ++ + + ++++
Sbjct: 363 F---VTMMIEEKPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLL 419
Query: 399 SKCGELHDSLQVFYEMT-QKNSISWNSVIAAFARHGDGSRA 438
+ G L ++ + M + N I +S ++A ++ D RA
Sbjct: 420 GRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERA 460
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 141/284 (49%), Gaps = 4/284 (1%)
Query: 74 FDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGF 133
FD + W +++ Y ++ A KLFD MP R+ VSWN+MI G+ +N+ G
Sbjct: 199 FDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGI 258
Query: 134 RFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALI 193
R F++M + ++ D T+ ++L A S+ H V ++++ V A++
Sbjct: 259 RLFQEMQATTSLDP--DDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAIL 316
Query: 194 TSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTL 253
Y KCG + +++FDEM E+ V +W A+I G A N L LF M P+ +
Sbjct: 317 DMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE-KPDEI 375
Query: 254 TYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESA 313
T L+ + AC+ + EGRK ++ ++G+ + + ++DL + GSL+ A + +
Sbjct: 376 TMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNM 435
Query: 314 E-ELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMV 356
E +G+ L+ L A Q E A +I + V L + D N V
Sbjct: 436 PFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYV 479
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 245 bits (625), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 172/604 (28%), Positives = 284/604 (47%), Gaps = 49/604 (8%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPF----------FSFDSSRRNALFVWNSLLSM 91
+SS + V G + IH R+IK +F SSRR L+
Sbjct: 12 ISSTIHVLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRR-------PYLAD 64
Query: 92 YSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDK 151
+++C + + F V D WN++I +D M E+ DK
Sbjct: 65 FARCVFHEYHVCSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGV---SVDK 121
Query: 152 ATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDE 211
+L+ +L AC F IHG + G ++ + N LI Y KCGC RQ+FD
Sbjct: 122 FSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDR 181
Query: 212 MIERNVVTWTAVISGLAQNELYEDGLRLFAQM--------------RGGSVSPNTLTYLS 257
M +R+ V++ ++I G + L LF M G + + + + S
Sbjct: 182 MPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIAS 241
Query: 258 SLMA------CSGVQALAEGRKIHGL------LWKLGMQSDLCIESALMDLYSKCGSLEG 305
L A ++ +G HG L+ + + D+ + ++D Y+K G +
Sbjct: 242 KLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHH 301
Query: 306 AWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLG--IEVDANMVSAVLGVF 363
A +F+ D V+ ++ + QN + EA++IF+ + + D +V + +
Sbjct: 302 AKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIA 361
Query: 364 GVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWN 423
+G L +H I++K F + LI+MYSKCG + ++ VF + K+ WN
Sbjct: 362 QLG-RLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWN 420
Query: 424 SVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRD 483
++I A HG G A ++ + P D+TF+ +L+ACSH+GLV++G+ M R
Sbjct: 421 AMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRK 480
Query: 484 HRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKF 543
H++ PR +HY C+VD+L R+G ++ AKN IE +P ++W+ L ACS H + E G+
Sbjct: 481 HKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGEL 540
Query: 544 AADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVS 603
A LIL A + + +VL++N+Y++ G WK+ MKE+ + K G SWIE+D +V
Sbjct: 541 VAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVH 600
Query: 604 SFVV 607
F V
Sbjct: 601 EFFV 604
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 243 bits (621), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 159/540 (29%), Positives = 274/540 (50%), Gaps = 41/540 (7%)
Query: 116 WNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHG 175
+N M+ + F F ++ + +Y D TL +L + +HG
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGEL-RGQGLYP--DNFTLPVVLKSIGRLRKVIEGEKVHG 70
Query: 176 LVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYED 235
G E + V N+L+ Y G +VFDEM +R+VV+W +IS N +ED
Sbjct: 71 YAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFED 130
Query: 236 GLRLFAQM-RGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALM 294
+ +F +M + ++ + T +S+L ACS ++ L G +I+ + + + I +AL+
Sbjct: 131 AIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVT-EFEMSVRIGNALV 189
Query: 295 DLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNG--------FE------------ 334
D++ KCG L+ A +F+S + + T ++ + G FE
Sbjct: 190 DMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTA 249
Query: 335 -----------EEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKN 383
+EA+++F + T GI D ++ ++L +L GK IH I +
Sbjct: 250 MMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENR 309
Query: 384 FSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYE 443
+ + V L++MY+KCG + +L+VFYE+ ++++ SW S+I A +G RAL Y
Sbjct: 310 VTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYY 369
Query: 444 EMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRA 503
EM G+ +TF+++L AC+H G V +G + SMT H + P+SEH +C++D+L RA
Sbjct: 370 EMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRA 429
Query: 504 GLLKEAKNFIE---GLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHV 560
GLL EA+ I+ G + V V+ +LL A +G+ ++ + A++L + S+ H
Sbjct: 430 GLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHT 489
Query: 561 LMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKL--HPQADII 618
L+A++Y++ +W++ ++MK+ G+ K G S IEID F+VGD L HP+ D I
Sbjct: 490 LLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEI 549
Score = 188 bits (478), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 119/405 (29%), Positives = 199/405 (49%), Gaps = 43/405 (10%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDA 101
L +L GR + G +H +K FDS +V NSL+ MY+ G+++
Sbjct: 49 LPVVLKSIGRLRKVIEGEKVHGYAVKAG--LEFDS------YVSNSLMGMYASLGKIEIT 100
Query: 102 IKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSAC 161
K+FD MP RD VSWN +IS ++ N F+ FK+MS+ + +FD+ T+ + LSAC
Sbjct: 101 HKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNL--KFDEGTIVSTLSAC 158
Query: 162 DGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERN----- 216
+ + I+ V V FE + +GNAL+ + KCGC + R VFD M ++N
Sbjct: 159 SALKNLEIGERIYRFV-VTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWT 217
Query: 217 --------------------------VVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSP 250
VV WTA+++G Q +++ L LF M+ + P
Sbjct: 218 SMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRP 277
Query: 251 NTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIF 310
+ +S L C+ AL +G+ IHG + + + D + +AL+D+Y+KCG +E A ++F
Sbjct: 278 DNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVF 337
Query: 311 ESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLP 370
+E D S T ++ A NG A+ ++ + +G+ +DA AVL G +
Sbjct: 338 YEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVA 397
Query: 371 LGKQI-HSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEM 414
G++I HS+ + N + LI++ + G L ++ ++ +M
Sbjct: 398 EGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKM 442
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 165/355 (46%), Gaps = 35/355 (9%)
Query: 216 NVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIH 275
+++ + ++ LA + + L LF ++RG + P+ T L + ++ + EG K+H
Sbjct: 10 SLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVH 69
Query: 276 GLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEE 335
G K G++ D + ++LM +Y+ G +E ++F+ + D VS ++ ++ NG E
Sbjct: 70 GYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFE 129
Query: 336 EAIQIFTRIVT-LGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGL 394
+AI +F R+ ++ D + + L +L +G++I+ ++ + F + + N L
Sbjct: 130 DAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE-FEMSVRIGNAL 188
Query: 395 INMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHG--DGSR--------------- 437
++M+ KCG L + VF M KN W S++ + G D +R
Sbjct: 189 VDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWT 248
Query: 438 --------------ALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRD 483
AL+ + M+ GI P + +SLL C+ G +E+G +++ +
Sbjct: 249 AMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQG-KWIHGYINE 307
Query: 484 HRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDS 538
+R++ +VDM + G ++ A + E R W +L+ +++G S
Sbjct: 308 NRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKE-RDTASWTSLIYGLAMNGMS 361
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 243 bits (619), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 142/447 (31%), Positives = 231/447 (51%), Gaps = 16/447 (3%)
Query: 207 QVFDEMIERNVVTWTAVISGLAQN-ELYEDGLRLFAQM-RGGSVSPNTLTYLSSLMACSG 264
+VFD + + W +I A + E+ L+ +M G SP+ T+ L AC+
Sbjct: 104 RVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAY 163
Query: 265 VQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVI 324
+ +EG+++H + K G D+ + + L+ LY CG L+ A ++F+ E VS +
Sbjct: 164 IFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSM 223
Query: 325 LVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKK-- 382
+ A + G + A+Q+F R + E D + +VL SL LG H+ +++K
Sbjct: 224 IDALVRFGEYDSALQLF-REMQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCD 282
Query: 383 -NFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQF 441
+ + + V N LI MY KCG L + QVF M +++ SWN++I FA HG A+ F
Sbjct: 283 VDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNF 342
Query: 442 YEEM--RVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDM 499
++ M + + P VTF+ LL AC+H G V KG ++ M RD+ + P EHY C+VD+
Sbjct: 343 FDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDL 402
Query: 500 LGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDS-EMGKFAADQLILAAPAS--- 555
+ RAG + EA + + +P ++W++LL AC G S E+ + A +I +
Sbjct: 403 IARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESS 462
Query: 556 ----SAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKL 611
S +VL++ +Y++ +W + K M E G+ KE G S IEI+ F GD
Sbjct: 463 NGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTS 522
Query: 612 HPQADIIFLELSRLLKHLKDEGYVPDK 638
HPQ I+ +L + L+ GY+PD+
Sbjct: 523 HPQTKQIYQQLKVIDDRLRSIGYLPDR 549
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 110/424 (25%), Positives = 208/424 (49%), Gaps = 25/424 (5%)
Query: 23 PISQYPFPATSESVL----NHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSR 78
P+S + PA+S S +H + SL C L +HA ++ +
Sbjct: 28 PLSPHIPPASSPSASTAGNHHQRIFSLAETCSDMSQL---KQLHAFTLR-----TTYPEE 79
Query: 79 RNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRN-RDFDAGFRFFK 137
LF++ +L + S ++ A ++FD + + WN++I + + F ++
Sbjct: 80 PATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYR 139
Query: 138 QMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYF 197
+M E S DK T +L AC S + +H + GF ++ V N LI Y
Sbjct: 140 KMLERGE--SSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYG 197
Query: 198 KCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLS 257
CGC R+VFDEM ER++V+W ++I L + Y+ L+LF +M+ S P+ T S
Sbjct: 198 SCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQ-RSFEPDGYTMQS 256
Query: 258 SLMACSGVQALAEGRKIHGLLWK---LGMQSDLCIESALMDLYSKCGSLEGAWQIFESAE 314
L AC+G+ +L+ G H L + + + D+ ++++L+++Y KCGSL A Q+F+ +
Sbjct: 257 VLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQ 316
Query: 315 ELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTS--LPLG 372
+ D S +++ FA +G EEA+ F R+V V N V+ V + + G
Sbjct: 317 KRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKG 376
Query: 373 KQIHSLIIKKNFSQNPFVSN--GLINMYSKCGELHDSLQVFYEMTQK-NSISWNSVIAAF 429
+Q +++ +++ P + + ++++ ++ G + +++ + M K +++ W S++ A
Sbjct: 377 RQYFDMMV-RDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDAC 435
Query: 430 ARHG 433
+ G
Sbjct: 436 CKKG 439
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 242 bits (617), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 135/463 (29%), Positives = 242/463 (52%), Gaps = 4/463 (0%)
Query: 192 LITSYFKCGCFCQGRQVFDEMIERNVVT---WTAVISGLAQNELYEDGLRLFAQMRGGSV 248
LIT + C R++FD++ + +++T W A+ G ++N D L ++ M +
Sbjct: 173 LITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFI 232
Query: 249 SPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQ 308
P + +L AC ++ L GR IH + K + D + + L+ LY + G + A +
Sbjct: 233 EPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARK 292
Query: 309 IFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTS 368
+F+ E + V+ ++ ++ E +F ++ I ++ +L +
Sbjct: 293 VFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAA 352
Query: 369 LPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAA 428
L GK+IH+ I+K + + N L++MY KCGE+ S +VF M K+ SWN ++
Sbjct: 353 LLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNC 412
Query: 429 FARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSP 488
+A +G+ + +E M G+AP +TF++LL CS GL E G+ M + R+SP
Sbjct: 413 YAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSP 472
Query: 489 RSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQL 548
EHYAC+VD+LGRAG +KEA IE +P +W +LL +C +HG+ +G+ AA +L
Sbjct: 473 ALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKEL 532
Query: 549 ILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVG 608
+ P + +V+++NIY+ W + MK++GV KE G SW+++ ++ FV G
Sbjct: 533 FVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAG 592
Query: 609 DKLHPQADIIFLEL-SRLLKHLKDEGYVPDKRCILYYLDQDKK 650
+ + ++ + L + ++ GY P+ +L+ +D++ K
Sbjct: 593 GGYEFRNSDEYKKVWTELQEAIEKSGYSPNTSVVLHDVDEETK 635
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 194/404 (48%), Gaps = 25/404 (6%)
Query: 43 SSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAI 102
+ LL C +LH G I + I+ P S R N + + L++++S C L A
Sbjct: 135 TDLLHACISAKSLHHGIKICSLILNNP------SLRHNPKLL-SKLITLFSVCRRLDLAR 187
Query: 103 KLFDRMPVRDTVS---WNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLS 159
K+FD + ++ W +M G+ RN + M S F +++ L
Sbjct: 188 KIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNF---SISVALK 244
Query: 160 ACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVT 219
AC + V R IH + + + V N L+ Y + G F R+VFD M ERNVVT
Sbjct: 245 ACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVT 304
Query: 220 WTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLW 279
W ++IS L++ + LF +M+ + + T + L ACS V AL G++IH +
Sbjct: 305 WNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQIL 364
Query: 280 KLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQ 339
K + D+ + ++LMD+Y KCG +E + ++F+ D S ++L +A NG EE I
Sbjct: 365 KSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVIN 424
Query: 340 IFTRIVTLGIEVDANMVSAVL-GVFGVGTS---LPLGKQIHSLIIKKNFSQNPFVSN--G 393
+F ++ G+ D A+L G G + L L ++ +K F +P + +
Sbjct: 425 LFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFER-----MKTEFRVSPALEHYAC 479
Query: 394 LINMYSKCGELHDSLQVFYEMTQKNSIS-WNSVIAAFARHGDGS 436
L+++ + G++ ++++V M K S S W S++ + HG+ S
Sbjct: 480 LVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVS 523
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 135/277 (48%), Gaps = 22/277 (7%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDA 101
+S L C +L +G IHA+I+K+ + V+N LL +Y + G DA
Sbjct: 239 ISVALKACVDLKDLRVGRGIHAQIVKR--------KEKVDQVVYNVLLKLYMESGLFDDA 290
Query: 102 IKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSAC 161
K+FD M R+ V+WNS+IS + F F++M E +S ATLTT+L AC
Sbjct: 291 RKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSW---ATLTTILPAC 347
Query: 162 DGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWT 221
+ IH + + ++ + N+L+ Y KCG R+VFD M+ +++ +W
Sbjct: 348 SRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWN 407
Query: 222 AVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKL 281
+++ A N E+ + LF M V+P+ +T+++ L CS G +GL
Sbjct: 408 IMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDT-----GLTEYGLSLFE 462
Query: 282 GMQSDLCIESA------LMDLYSKCGSLEGAWQIFES 312
M+++ + A L+D+ + G ++ A ++ E+
Sbjct: 463 RMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIET 499
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 18/167 (10%)
Query: 40 AHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQ 99
A L+++L C R L G IHA+I+K S + + + NSL+ MY KCGE++
Sbjct: 338 ATLTTILPACSRVAALLTGKEIHAQILK--------SKEKPDVPLLNSLMDMYGKCGEVE 389
Query: 100 DAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLS 159
+ ++FD M +D SWN M++ + N + + F+ M ES D T +LS
Sbjct: 390 YSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAP---DGITFVALLS 446
Query: 160 ACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGR 206
C + +GL + E V AL ++ C GR
Sbjct: 447 GCSDTGLTE-----YGLSLFERMKTEFRVSPAL--EHYACLVDILGR 486
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 240 bits (612), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 144/466 (30%), Positives = 243/466 (52%), Gaps = 39/466 (8%)
Query: 207 QVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMAC---- 262
Q ++ V+WT+ I+ L +N + + F+ M V PN +T+++ L C
Sbjct: 26 QRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFT 85
Query: 263 SGVQALAEGRKIHGLLWKLGM-QSDLCIESALMDLYSK---------------------- 299
SG +AL G +HG KLG+ ++ + + +A++ +YSK
Sbjct: 86 SGSEAL--GDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTW 143
Query: 300 ---------CGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIE 350
G ++ A ++F+ E D +S T ++ F + G++EEA+ F + G++
Sbjct: 144 NTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVK 203
Query: 351 VDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQV 410
D + A L +L G +H ++ ++F N VSN LI++Y +CG + + QV
Sbjct: 204 PDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQV 263
Query: 411 FYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLV 470
FY M ++ +SWNSVI FA +G+ +L ++ +M+ G P VTF L ACSH GLV
Sbjct: 264 FYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLV 323
Query: 471 EKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLG 530
E+G+ + M D+R+SPR EHY C+VD+ RAG L++A ++ +P +V +LL
Sbjct: 324 EEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLA 383
Query: 531 ACSIHGDS-EMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAK 589
ACS HG++ + + L S + +V+++N+Y+A+GKW+ + ++MK G+ K
Sbjct: 384 ACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKK 443
Query: 590 EVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDEGYV 635
+ G S IEID + F+ GD H + I L + L+ +G V
Sbjct: 444 QPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQGCV 489
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 124/241 (51%), Gaps = 6/241 (2%)
Query: 74 FDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGF 133
FD WN+++ Y + G++ +A K+FD+MP RD +SW +MI+GF++ +
Sbjct: 132 FDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEAL 191
Query: 134 RFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALI 193
+F++M S + D + L+AC S +H V F+ + V N+LI
Sbjct: 192 LWFREMQISGV---KPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLI 248
Query: 194 TSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTL 253
Y +CGC RQVF M +R VV+W +VI G A N + L F +M+ P+ +
Sbjct: 249 DLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAV 308
Query: 254 TYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIE--SALMDLYSKCGSLEGAWQIFE 311
T+ +L ACS V + EG + ++ K + IE L+DLYS+ G LE A ++ +
Sbjct: 309 TFTGALTACSHVGLVEEGLRYFQIM-KCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQ 367
Query: 312 S 312
S
Sbjct: 368 S 368
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 174/361 (48%), Gaps = 45/361 (12%)
Query: 113 TVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSR- 171
TVSW S I+ RN + F M+ + + T +LS C +F+S S
Sbjct: 36 TVSWTSRINLLTRNGRLAEAAKEFSDMTLAGV---EPNHITFIALLSGCG--DFTSGSEA 90
Query: 172 ---MIHGLVFVGGFERE-ITVGNALITSYFKCGCFCQGR--------------------- 206
++HG G +R + VG A+I Y K G F + R
Sbjct: 91 LGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGY 150
Query: 207 ----------QVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYL 256
++FD+M ER++++WTA+I+G + E+ L F +M+ V P+ + +
Sbjct: 151 MRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAII 210
Query: 257 SSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEEL 316
++L AC+ + AL+ G +H + ++++ + ++L+DLY +CG +E A Q+F + E+
Sbjct: 211 AALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKR 270
Query: 317 DGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIH 376
VS ++V FA NG E++ F ++ G + DA + L + G +
Sbjct: 271 TVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYF 330
Query: 377 SLIIKKNFSQNPFVSN--GLINMYSKCGELHDSLQVFYEMTQK-NSISWNSVIAAFARHG 433
I+K ++ +P + + L+++YS+ G L D+L++ M K N + S++AA + HG
Sbjct: 331 Q-IMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHG 389
Query: 434 D 434
+
Sbjct: 390 N 390
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 239 bits (610), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 153/500 (30%), Positives = 246/500 (49%), Gaps = 56/500 (11%)
Query: 84 VWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESR 143
V NSL+S Y KCG A ++F D VSWN++I ++ + + F M E
Sbjct: 252 VVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHG 311
Query: 144 TVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFC 203
+S ++ T ++L + S R IHG++ G E I +GNALI Y KCG
Sbjct: 312 --FSP-NQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLE 368
Query: 204 QGRQVFDEMIERNVVTWTAVISGLAQNELYEDG---LRLFAQMRGGSVSPNTLTYLSSLM 260
R FD + ++N+V W A++SG A +DG L LF QM P T+ ++L
Sbjct: 369 DSRLCFDYIRDKNIVCWNALLSGYAN----KDGPICLSLFLQMLQMGFRPTEYTFSTALK 424
Query: 261 ACSGVQALAEGRKIHGLLWKLGMQSDLCIESALM-------------------------- 294
+C + E +++H ++ ++G + + + S+LM
Sbjct: 425 SC----CVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVV 480
Query: 295 ------DLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLG 348
+YS+ G + ++ + E+ D VS + + A +++ + EE I++F ++
Sbjct: 481 PLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSN 540
Query: 349 IEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFS-QNPFVSNGLINMYSKCGELHDS 407
I D ++L + L LG IH LI K +FS + FV N LI+MY KCG +
Sbjct: 541 IRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSV 600
Query: 408 LQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHA 467
++VF E +KN I+W ++I+ HG G AL+ ++E G P V+F+S+L AC H
Sbjct: 601 MKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHG 660
Query: 468 GLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQA 527
G+V++GM M +D+ + P +HY C VD+L R G LKEA++ I +P VW+
Sbjct: 661 GMVKEGMGLFQKM-KDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRT 719
Query: 528 LLGACSIHGDSEMGKFAADQ 547
L C+ +FA +Q
Sbjct: 720 FLDGCN--------RFAEEQ 731
Score = 182 bits (461), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 156/593 (26%), Positives = 269/593 (45%), Gaps = 63/593 (10%)
Query: 38 NHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGE 97
N + +S LLS D + G+ +H +K F + FV LL +Y +
Sbjct: 114 NQSTVSGLLSCASLD--VRAGTQLHGLSLKYGLFMA-------DAFVGTCLLCLYGRLDL 164
Query: 98 LQDAIKLFDRMPVRDTVSWNSMIS-----GFLRNRDFDAGFRFFKQMSESRTVYSRFDKA 152
L+ A ++F+ MP + +WN M+S GFL+ F FR +M S T ++
Sbjct: 165 LEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMF--FFRELVRMGASLT------ES 216
Query: 153 TLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEM 212
+ +L + +S+ +H G + EI+V N+LI++Y KCG ++F +
Sbjct: 217 SFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDA 276
Query: 213 IERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGR 272
++V+W A+I A++E L+LF M SPN TY+S L S VQ L+ GR
Sbjct: 277 GSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGR 336
Query: 273 KIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNG 332
+IHG+L K G ++ + + +AL+D Y+KCG+LE + F+ + + V +L +A N
Sbjct: 337 QIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NK 395
Query: 333 FEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFV-- 390
+ +F +++ +G S L V T L +Q+HS+I++ + N +V
Sbjct: 396 DGPICLSLFLQMLQMGFRPTEYTFSTALKSCCV-TEL---QQLHSVIVRMGYEDNDYVLS 451
Query: 391 -------SNGLIN-----------------------MYSKCGELHDSLQVFYEMTQKNSI 420
N L+N +YS+ G+ H+S+++ + Q +++
Sbjct: 452 SLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTV 511
Query: 421 SWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSM 480
SWN IAA +R ++ ++ M I P TF+S+L CS + G +
Sbjct: 512 SWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLI 571
Query: 481 TRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSE- 539
T+ + ++DM G+ G ++ E E + ++ W AL+ IHG +
Sbjct: 572 TKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETRE-KNLITWTALISCLGIHGYGQE 630
Query: 540 -MGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEV 591
+ KF + L L + + G KE G ++MK+ GV E+
Sbjct: 631 ALEKF-KETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDYGVEPEM 682
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 145/560 (25%), Positives = 256/560 (45%), Gaps = 71/560 (12%)
Query: 44 SLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIK 103
SLL+VC + + ++HA I + S ++V N+++S+Y K GE+ A K
Sbjct: 17 SLLNVCRKAPSFARTKALHALSI------TLCSVLLQPVYVCNNIISLYEKLGEVSLAGK 70
Query: 104 LFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDG 163
+FD+MP R+ VS+N++I G+ + D D + F SE R +++T++ +LS C
Sbjct: 71 VFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVF---SEMRYFGYLPNQSTVSGLLS-CAS 126
Query: 164 PEFSSVSRMIHGLVF-VGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTA 222
+ + +++ HGL G F + VG L+ Y + QVF++M +++ TW
Sbjct: 127 LDVRAGTQL-HGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNH 185
Query: 223 VISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLG 282
++S L ++ + F ++ S ++L L S V+ L +++H K G
Sbjct: 186 MMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKG 245
Query: 283 MQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFT 342
+ ++ + ++L+ Y KCG+ A ++F+ A D VS I+ A A++ +A+++F
Sbjct: 246 LDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFV 305
Query: 343 RIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCG 402
+ G + +VLGV + L G+QIH ++IK + N LI+ Y+KCG
Sbjct: 306 SMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCG 365
Query: 403 ELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLH 462
L DS F + KN + WN++++ +A + DG L + +M G PT+ TF + L
Sbjct: 366 NLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTFSTALK 424
Query: 463 ACS-------HAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEG 515
+C H+ +V G E D+ LS YA + L+ +A ++
Sbjct: 425 SCCVTELQQLHSVIVRMGYE-----DNDYVLSSLMRSYA-------KNQLMNDALLLLD- 471
Query: 516 LPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKER 575
W + P S P ++A IYS G++ E
Sbjct: 472 ---------WA------------------------SGPTSVVPLNIVAGIYSRRGQYHES 498
Query: 576 AGAIKRMKEKGVAKEVGVSW 595
I +++ VSW
Sbjct: 499 VKLISTLEQPDT-----VSW 513
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 238 bits (608), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 157/553 (28%), Positives = 266/553 (48%), Gaps = 42/553 (7%)
Query: 45 LLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKL 104
L+ GRD G +HA ++ S + L++ Y +CG++ DA K+
Sbjct: 22 LIEANGRDRLFCRGRVLHAHLVT--------SGIARLTRIAAKLVTFYVECGKVLDARKV 73
Query: 105 FDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGP 164
FD MP RD MI RN + FF++M + + D + ++L A
Sbjct: 74 FDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGL---KLDAFIVPSLLKASRNL 130
Query: 165 EFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVI 224
+MIH LV +E + + ++LI Y K G R+VF ++ E+++V + A+I
Sbjct: 131 LDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMI 190
Query: 225 SGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQ 284
SG A N ++ L L M+ + P+ +T+ + + SG + K+ +L
Sbjct: 191 SGYANNSQADEALNLVKDMKLLGIKPDVITWNALI---SGFSHMRNEEKVSEIL------ 241
Query: 285 SDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRI 344
E +D Y D VS T I+ N E+A F ++
Sbjct: 242 -----ELMCLDGYKP-----------------DVVSWTSIISGLVHNFQNEKAFDAFKQM 279
Query: 345 VTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGEL 404
+T G+ ++ + +L + GK+IH + + FV + L++MY KCG +
Sbjct: 280 LTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFI 339
Query: 405 HDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHAC 464
+++ +F + +K ++++NS+I +A HG +A++ +++M G +TF ++L AC
Sbjct: 340 SEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTAC 399
Query: 465 SHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLV 524
SHAGL + G + M +R+ PR EHYAC+VD+LGRAG L EA I+ + + V
Sbjct: 400 SHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFV 459
Query: 525 WQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKE 584
W ALL AC HG+ E+ + AA L P +S +L+ ++Y+ G W+ K +K+
Sbjct: 460 WGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESVVRMKKMIKK 519
Query: 585 KGVAKEVGVSWIE 597
K + +G SW+E
Sbjct: 520 KRFRRFLGSSWVE 532
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 131/247 (53%), Gaps = 6/247 (2%)
Query: 243 MRGGSVSPNTLTYLS-----SLMACSGVQAL-AEGRKIHGLLWKLGMQSDLCIESALMDL 296
M+ ++ P++ LS L+ +G L GR +H L G+ I + L+
Sbjct: 1 MKKLTIVPSSFRLLSIGSYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTF 60
Query: 297 YSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMV 356
Y +CG + A ++F+ + D V++ A A+NG+ +E++ F + G+++DA +V
Sbjct: 61 YVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIV 120
Query: 357 SAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQ 416
++L GK IH L++K ++ + F+ + LI+MYSK GE+ ++ +VF ++ +
Sbjct: 121 PSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGE 180
Query: 417 KNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEF 476
++ + +N++I+ +A + AL ++M++ GI P +T+ +L+ SH EK E
Sbjct: 181 QDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEI 240
Query: 477 LVSMTRD 483
L M D
Sbjct: 241 LELMCLD 247
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 238 bits (607), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 143/470 (30%), Positives = 247/470 (52%), Gaps = 46/470 (9%)
Query: 204 QGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACS 263
+VFDE+ E +V++ TAVI + + + + F ++ + PN T+ + + + +
Sbjct: 45 NAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSST 104
Query: 264 GVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLT- 322
+ + G+++H K+G+ S++ + SA+++ Y K +L A + F+ + + VS+T
Sbjct: 105 TSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITN 164
Query: 323 ------------------------------VILVAFAQNGFEEEAIQIFTRIVTLGIEV- 351
++ F+Q G EEA+ F ++ G+ +
Sbjct: 165 LISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIP 224
Query: 352 -DANMVSAVLGVFGVGTSLPLGKQIHSLIIK---KNFSQNPFVSNGLINMYSKCGELHDS 407
++ A+ + + S GK IH+ IK K F N FV N LI+ YSKCG + DS
Sbjct: 225 NESTFPCAITAISNIA-SHGAGKSIHACAIKFLGKRF--NVFVWNSLISFYSKCGNMEDS 281
Query: 408 LQVF--YEMTQKNSISWNSVIAAFARHGDGSRALQFYEEM-RVGGIAPTDVTFLSLLHAC 464
L F E Q+N +SWNS+I +A +G G A+ +E+M + + P +VT L +L AC
Sbjct: 282 LLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFAC 341
Query: 465 SHAGLVEKGMEFLVSMTRDHRLSP---RSEHYACVVDMLGRAGLLKEAKNFIEGLPENRG 521
+HAGL+++G + D+ P EHYAC+VDML R+G KEA+ I+ +P + G
Sbjct: 342 NHAGLIQEGYMYFNKAVNDYD-DPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPG 400
Query: 522 VLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKR 581
+ W+ALLG C IH + + K AA +++ P + +V+++N YSA W+ + ++
Sbjct: 401 IGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRK 460
Query: 582 MKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKD 631
MKE G+ + G SWIE+ Q+ FV DK + D ++ L+ + +HL++
Sbjct: 461 MKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRMLALVSQHLEE 510
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 135/303 (44%), Gaps = 43/303 (14%)
Query: 98 LQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTM 157
+++A K+FD +P D +S ++I F++ + FK++ + R ++ T T+
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRL---LCLGIRPNEFTFGTV 99
Query: 158 LSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNV 217
+ + + + +H G + VG+A++ Y K R+ FD+ + NV
Sbjct: 100 IGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNV 159
Query: 218 VTWTAVISGLAQNELYEDGLRLFAQM--------------------------------RG 245
V+ T +ISG + +E+ L LF M R
Sbjct: 160 VSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLRE 219
Query: 246 GSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWK-LGMQSDLCIESALMDLYSKCGSLE 304
G V PN T+ ++ A S + + G+ IH K LG + ++ + ++L+ YSKCG++E
Sbjct: 220 GVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNME 279
Query: 305 GAWQIFESAEE--LDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGV 362
+ F EE + VS ++ +A NG EEA+ +F ++V D N+ + +
Sbjct: 280 DSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVK-----DTNLRPNNVTI 334
Query: 363 FGV 365
GV
Sbjct: 335 LGV 337
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 111/250 (44%), Gaps = 8/250 (3%)
Query: 303 LEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGV 362
+ A ++F+ ELD +S T ++ F + EA Q F R++ LGI + V+G
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGS 102
Query: 363 FGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISW 422
+ LGKQ+H +K + N FV + ++N Y K L D+ + F + N +S
Sbjct: 103 STTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSI 162
Query: 423 NSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTR 482
++I+ + + + AL + M + VT+ +++ S G E+ + V M R
Sbjct: 163 TNLISGYLKKHEFEEALSLFRAMPERSV----VTWNAVIGGFSQTGRNEEAVNTFVDMLR 218
Query: 483 DHRLSPRSEHYACVVDMLGRAGLLKEAKNF----IEGLPENRGVLVWQALLGACSIHGDS 538
+ + P + C + + K+ I+ L + V VW +L+ S G+
Sbjct: 219 EGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNM 278
Query: 539 EMGKFAADQL 548
E A ++L
Sbjct: 279 EDSLLAFNKL 288
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 10/204 (4%)
Query: 74 FDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRN-RDFDAG 132
FD +R + +L+S Y K E ++A+ LF MP R V+WN++I GF + R+ +A
Sbjct: 151 FDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAV 210
Query: 133 FRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIH--GLVFVGGFEREITVGN 190
F + E + +++T ++A + IH + F+G + V N
Sbjct: 211 NTFVDMLREGVVIP---NESTFPCAITAISNIASHGAGKSIHACAIKFLGK-RFNVFVWN 266
Query: 191 ALITSYFKCGCFCQGRQVFDEMIE--RNVVTWTAVISGLAQNELYEDGLRLFAQM-RGGS 247
+LI+ Y KCG F+++ E RN+V+W ++I G A N E+ + +F +M + +
Sbjct: 267 SLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTN 326
Query: 248 VSPNTLTYLSSLMACSGVQALAEG 271
+ PN +T L L AC+ + EG
Sbjct: 327 LRPNNVTILGVLFACNHAGLIQEG 350
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 236 bits (603), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 153/499 (30%), Positives = 262/499 (52%), Gaps = 17/499 (3%)
Query: 104 LFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDG 163
LFD +P RD S NS +S LR+ + + F Q+ + S T T +L AC
Sbjct: 40 LFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLS---SHTFTPVLGACSL 96
Query: 164 PEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAV 223
+ R +H L+ G E ALI Y K G +VF+ + E+++V+W A+
Sbjct: 97 LSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNAL 156
Query: 224 ISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGM 283
+SG +N ++ L +FA M V + T S + C+ ++ L +G+++H ++ G
Sbjct: 157 LSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTG- 215
Query: 284 QSDLCIESALMDLYSKCGSLEGAWQIFESAE-ELDGVSLTVILVAFAQNGFEEEAIQIFT 342
+ + + +A++ YS G + A +++ S D V L ++ +N +EA + +
Sbjct: 216 RDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMS 275
Query: 343 RIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCG 402
R + ++S+ L + L +GKQIH + ++ F + + NGL++MY KCG
Sbjct: 276 RQ-----RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCG 330
Query: 403 ELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEM--RVGGIAPTDVTFLSL 460
++ + +F + K+ +SW S+I A+A +GDG +AL+ + EM G+ P VTFL +
Sbjct: 331 QIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVV 390
Query: 461 LHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENR 520
+ AC+HAGLV++G E M +RL P +EHY C +D+L +AG +E +E + EN
Sbjct: 391 ISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMEND 450
Query: 521 G----VLVWQALLGACSIHGDSEMGKFAADQLI-LAAPASSAPHVLMANIYSAEGKWKER 575
+W A+L ACS++ D G++ A +L+ P +++ +VL++N Y+A GKW
Sbjct: 451 NQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVV 510
Query: 576 AGAIKRMKEKGVAKEVGVS 594
++K KG+ K G S
Sbjct: 511 EELRGKLKNKGLVKTAGHS 529
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 111/407 (27%), Positives = 192/407 (47%), Gaps = 30/407 (7%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDA 101
+ +L C G +HA +IKQ +L+ MYSK G L D+
Sbjct: 87 FTPVLGACSLLSYPETGRQVHALMIKQGA--------ETGTISKTALIDMYSKYGHLVDS 138
Query: 102 IKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSAC 161
+++F+ + +D VSWN+++SGFLRN F M R S F TL++++ C
Sbjct: 139 VRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEF---TLSSVVKTC 195
Query: 162 DGPEFSSVSRMIHGLVFVGGFEREITV-GNALITSYFKCGCFCQGRQVFDEM-IERNVVT 219
+ + +H +V V G R++ V G A+I+ Y G + +V++ + + + V
Sbjct: 196 ASLKILQQGKQVHAMVVVTG--RDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVM 253
Query: 220 WTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLW 279
++ISG +N Y++ L ++ R PN SSL CS L G++IH +
Sbjct: 254 LNSLISGCIRNRNYKEAFLLMSRQR-----PNVRVLSSSLAGCSDNSDLWIGKQIHCVAL 308
Query: 280 KLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQ 339
+ G SD + + LMD+Y KCG + A IF + VS T ++ A+A NG +A++
Sbjct: 309 RNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALE 368
Query: 340 IFTRIVTLGIEVDANMVS--AVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSN--GLI 395
IF + G V N V+ V+ + GK+ + +K+ + P + I
Sbjct: 369 IFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGM-MKEKYRLVPGTEHYVCFI 427
Query: 396 NMYSKCGELHDSLQVFYEMTQKNSIS-----WNSVIAAFARHGDGSR 437
++ SK GE + ++ M + ++ S W +V++A + + D +R
Sbjct: 428 DILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTR 474
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 236 bits (602), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 135/420 (32%), Positives = 230/420 (54%), Gaps = 13/420 (3%)
Query: 173 IHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNV--VTWTAVISGLAQN 230
+H L+ + + + L+ Y CG +VFD M +R+ W ++ISG A+
Sbjct: 114 VHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAEL 173
Query: 231 ELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIE 290
YED + L+ QM V P+ T+ L AC G+ ++ G IH L K G D+ +
Sbjct: 174 GQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVL 233
Query: 291 SALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIE 350
+AL+ +Y+KCG + A +F+ D VS +L + +G EA+ IF +V GIE
Sbjct: 234 NALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIE 293
Query: 351 VDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQV 410
D +S+VL S G+Q+H +I++ V+N LI +YSK G+L + +
Sbjct: 294 PDKVAISSVLARV---LSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFI 350
Query: 411 FYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLV 470
F +M +++++SWN++I+A H S L+++E+M P +TF+S+L C++ G+V
Sbjct: 351 FDQMLERDTVSWNAIISA---HSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMV 407
Query: 471 EKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFI-EGLPENRGVLVWQALL 529
E G M++++ + P+ EHYAC+V++ GRAG+++EA + I + + G VW ALL
Sbjct: 408 EDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALL 467
Query: 530 GACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAK 589
AC +HG++++G+ AA +L P + L+ IYS +RA ++R+++ V +
Sbjct: 468 YACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSK----AKRAEDVERVRQMMVDR 523
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 197/399 (49%), Gaps = 24/399 (6%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDA 101
+SLL C + G +H I PP+ RN L + + L+ +Y+ CG + A
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLI---PPYL-----LRNNLGISSKLVRLYASCGYAEVA 146
Query: 102 IKLFDRMPVRDT--VSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLS 159
++FDRM RD+ +WNS+ISG+ ++ + QM+E RF T +L
Sbjct: 147 HEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRF---TFPRVLK 203
Query: 160 ACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVT 219
AC G + IH + GF ++ V NAL+ Y KCG + R VFD + ++ V+
Sbjct: 204 ACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVS 263
Query: 220 WTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLW 279
W ++++G + L + L +F M + P+ + +SS++A V + GR++HG +
Sbjct: 264 WNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVA-ISSVLA--RVLSFKHGRQLHGWVI 320
Query: 280 KLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQ 339
+ GM+ +L + +AL+ LYSK G L A IF+ E D VS I+ A ++N ++
Sbjct: 321 RRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNS---NGLK 377
Query: 340 IFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSN--GLINM 397
F ++ + D +VL + + G+++ SL + K + +P + + ++N+
Sbjct: 378 YFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSL-MSKEYGIDPKMEHYACMVNL 436
Query: 398 YSKCGELHDSLQ-VFYEM-TQKNSISWNSVIAAFARHGD 434
Y + G + ++ + EM + W +++ A HG+
Sbjct: 437 YGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGN 475
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 142/289 (49%), Gaps = 23/289 (7%)
Query: 255 YLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAE 314
+ S L C ++A+ G ++H L+ ++++L I S L+ LY+ CG E A ++F+
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMS 154
Query: 315 ELDG--VSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLG 372
+ D + ++ +A+ G E+A+ ++ ++ G++ D VL G S+ +G
Sbjct: 155 KRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIG 214
Query: 373 KQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARH 432
+ IH ++K+ F + +V N L+ MY+KCG++ + VF + K+ +SWNS++ + H
Sbjct: 215 EAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHH 274
Query: 433 GDGSRALQFYEEMRVGGIAPTDVTFLSLL-------HACS-HAGLVEKGMEFLVSMTRDH 484
G AL + M GI P V S+L H H ++ +GME+ +S+
Sbjct: 275 GLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKHGRQLHGWVIRRGMEWELSVAN-- 332
Query: 485 RLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACS 533
++ + + G L +A + + E R + W A++ A S
Sbjct: 333 ----------ALIVLYSKRGQLGQACFIFDQMLE-RDTVSWNAIISAHS 370
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 235 bits (600), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 133/439 (30%), Positives = 227/439 (51%), Gaps = 32/439 (7%)
Query: 207 QVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVS-PNTLTYLSSLMACSGV 265
++F+++ NV + ++I N LY D +R++ Q+ S P+ T+ +C+ +
Sbjct: 63 RLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASL 122
Query: 266 QALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVIL 325
+ G+++HG L K G + + E+AL+D+Y K L A ++F+ E D +S +L
Sbjct: 123 GSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLL 182
Query: 326 VAFAQNGFEE-------------------------------EAIQIFTRIVTLGIEVDAN 354
+A+ G + EA+ F + GIE D
Sbjct: 183 SGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEI 242
Query: 355 MVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEM 414
+ +VL SL LGK IH ++ F + V N LI MYSKCG + ++Q+F +M
Sbjct: 243 SLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQM 302
Query: 415 TQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGM 474
K+ ISW+++I+ +A HG+ A++ + EM+ + P +TFL LL ACSH G+ ++G+
Sbjct: 303 EGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGL 362
Query: 475 EFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSI 534
+ M +D+++ P+ EHY C++D+L RAG L+ A + +P +W +LL +C
Sbjct: 363 RYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRT 422
Query: 535 HGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVS 594
G+ ++ A D L+ P +VL+ANIY+ GKW++ + K ++ + + K G S
Sbjct: 423 PGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGS 482
Query: 595 WIEIDKQVSSFVVGDKLHP 613
IE++ V FV GD P
Sbjct: 483 LIEVNNIVQEFVSGDNSKP 501
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 135/297 (45%), Gaps = 37/297 (12%)
Query: 45 LLSVCGRDGNLHLGSSIHARIIKQPPFFS-----------------------FDSSRRNA 81
+ C G+ +LG +H + K P F FD
Sbjct: 115 MFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERD 174
Query: 82 LFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSE 141
+ WNSLLS Y++ G+++ A LF M + VSW +MISG+ + FF++M
Sbjct: 175 VISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQL 234
Query: 142 SRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGC 201
+ D+ +L ++L +C + + IH GF ++ V NALI Y KCG
Sbjct: 235 AGI---EPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGV 291
Query: 202 FCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMA 261
Q Q+F +M ++V++W+ +ISG A + + F +M+ V PN +T+L L A
Sbjct: 292 ISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSA 351
Query: 262 CSGVQALAEGRKIHGLLWKLGMQSDLCIE------SALMDLYSKCGSLEGAWQIFES 312
CS V EG + + M+ D IE L+D+ ++ G LE A +I ++
Sbjct: 352 CSHVGMWQEGLRYFDM-----MRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKT 403
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 178/388 (45%), Gaps = 44/388 (11%)
Query: 91 MYSKCGELQD---AIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYS 147
M C +++D A +LF+++ + +NS+I + N + R +KQ+ R +
Sbjct: 48 MVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLL--RKSFE 105
Query: 148 RFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQ 207
D+ T M +C + + +HG + G + NALI Y K +
Sbjct: 106 LPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHK 165
Query: 208 VFDEMIERNV-------------------------------VTWTAVISGLAQNELYEDG 236
VFDEM ER+V V+WTA+ISG Y +
Sbjct: 166 VFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEA 225
Query: 237 LRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDL 296
+ F +M+ + P+ ++ +S L +C+ + +L G+ IH + G + +AL+++
Sbjct: 226 MDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEM 285
Query: 297 YSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMV 356
YSKCG + A Q+F E D +S + ++ +A +G AI+ F + +V N +
Sbjct: 286 YSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQR--AKVKPNGI 343
Query: 357 SAVLGVFGVGTSLPLGKQ--IHSLIIKKNFSQNPFVSN--GLINMYSKCGELHDSLQVFY 412
+ LG+ + + + ++ + ++++++ P + + LI++ ++ G+L ++++
Sbjct: 344 T-FLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITK 402
Query: 413 EMTQK-NSISWNSVIAAFARHGDGSRAL 439
M K +S W S++++ G+ AL
Sbjct: 403 TMPMKPDSKIWGSLLSSCRTPGNLDVAL 430
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 136/308 (44%), Gaps = 38/308 (12%)
Query: 265 VQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVI 324
V++ E +KI+ + G+ + + ++D K ++ A ++F + I
Sbjct: 20 VKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSI 79
Query: 325 LVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLP---LGKQIHSLIIK 381
+ A+ N + I+I+ +++ E+ + F SL LGKQ+H + K
Sbjct: 80 IRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFM--FKSCASLGSCYLGKQVHGHLCK 137
Query: 382 KNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSR---- 437
+ N LI+MY K +L D+ +VF EM +++ ISWNS+++ +AR G +
Sbjct: 138 FGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGL 197
Query: 438 ---------------------------ALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLV 470
A+ F+ EM++ GI P +++ +S+L +C+ G +
Sbjct: 198 FHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSL 257
Query: 471 EKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLG 530
E G + R L A +++M + G++ +A G E + V+ W ++
Sbjct: 258 ELGKWIHLYAERRGFLKQTGVCNA-LIEMYSKCGVISQAIQLF-GQMEGKDVISWSTMIS 315
Query: 531 ACSIHGDS 538
+ HG++
Sbjct: 316 GYAYHGNA 323
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 63/123 (51%), Gaps = 17/123 (13%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALF---VWNSLLSMYSKCGEL 98
L S+L C + G+L LG IH + RR L V N+L+ MYSKCG +
Sbjct: 244 LISVLPSCAQLGSLELGKWIHLY-----------AERRGFLKQTGVCNALIEMYSKCGVI 292
Query: 99 QDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTML 158
AI+LF +M +D +SW++MISG+ + + F +M ++ + + T +L
Sbjct: 293 SQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKV---KPNGITFLGLL 349
Query: 159 SAC 161
SAC
Sbjct: 350 SAC 352
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 235 bits (599), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 150/544 (27%), Positives = 269/544 (49%), Gaps = 39/544 (7%)
Query: 87 SLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVY 146
SLL+ Y K G ++ A +FDRM +D V+WN +ISG+++ + + M R
Sbjct: 314 SLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLM---RLEK 370
Query: 147 SRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGR 206
++D TL T++SA E + + + FE +I + + ++ Y KCG +
Sbjct: 371 LKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAK 430
Query: 207 QVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQ 266
+VFD +E++++ W +++ A++ L + LRLF M+ V PN +T+ +++
Sbjct: 431 KVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNG 490
Query: 267 ALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILV 326
+ E + + L MQS I + +S T ++
Sbjct: 491 QVDEAKDMF-----LQMQSSGIIPNL--------------------------ISWTTMMN 519
Query: 327 AFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQ 386
QNG EEAI ++ G+ +A ++ L SL +G+ IH II+ N
Sbjct: 520 GMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIR-NLQH 578
Query: 387 NPFVS--NGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEE 444
+ VS L++MY+KCG+++ + +VF N++I+A+A +G+ A+ Y
Sbjct: 579 SSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRS 638
Query: 445 MRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAG 504
+ G+ P ++T ++L AC+HAG + + +E + + P EHY +VD+L AG
Sbjct: 639 LEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAG 698
Query: 505 LLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMAN 564
++A IE +P + Q+L+ +C+ +E+ + + +L+ + P +S +V ++N
Sbjct: 699 ETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISN 758
Query: 565 IYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEI--DKQVSSFVVGDKLHPQADIIFLEL 622
Y+ EG W E + MK KG+ K+ G SWI+I ++ V FV DK H + + I + L
Sbjct: 759 AYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMML 818
Query: 623 SRLL 626
+ LL
Sbjct: 819 ALLL 822
Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 129/475 (27%), Positives = 242/475 (50%), Gaps = 10/475 (2%)
Query: 45 LLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKL 104
+L C + +L G IHARI+K F++ RN ++ L+ Y+KC L+ A L
Sbjct: 76 ILQGCVYERDLSTGKQIHARILKNGDFYA-----RNE-YIETKLVIFYAKCDALEIAEVL 129
Query: 105 FDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGP 164
F ++ VR+ SW ++I R + F +M E+ F + + AC
Sbjct: 130 FSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNF---VVPNVCKACGAL 186
Query: 165 EFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVI 224
++S R +HG V G E + V ++L Y KCG +VFDE+ +RN V W A++
Sbjct: 187 KWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALM 246
Query: 225 SGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQ 284
G QN E+ +RLF+ MR V P +T + L A + + + EG++ H + GM+
Sbjct: 247 VGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGME 306
Query: 285 SDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRI 344
D + ++L++ Y K G +E A +F+ E D V+ +I+ + Q G E+AI + +
Sbjct: 307 LDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLM 366
Query: 345 VTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGEL 404
++ D ++ ++ +L LGK++ I+ +F + +++ +++MY+KCG +
Sbjct: 367 RLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSI 426
Query: 405 HDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHAC 464
D+ +VF +K+ I WN+++AA+A G AL+ + M++ G+ P +T+ ++ +
Sbjct: 427 VDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSL 486
Query: 465 SHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPEN 519
G V++ + + M + + P + +++ + + G +EA F+ + E+
Sbjct: 487 LRNGQVDEAKDMFLQM-QSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQES 540
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 140/364 (38%), Gaps = 63/364 (17%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPFFS------------------------FDSS 77
L++L+S R NL LG + I+ F S FDS+
Sbjct: 378 LATLMSAAARTENLKLGKEVQCYCIRHS-FESDIVLASTVMDMYAKCGSIVDAKKVFDST 436
Query: 78 RRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVR----DTVSWNSMISGFLRNRDFDAGF 133
L +WN+LL+ Y++ G +A++LF M + + ++WN +I LRN D
Sbjct: 437 VEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAK 496
Query: 134 RFFKQMSESRTVYS--------------------------------RFDKATLTTMLSAC 161
F QM S + + R + ++T LSAC
Sbjct: 497 DMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSAC 556
Query: 162 DGPEFSSVSRMIHGLVFVG-GFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTW 220
+ R IHG + +++ +L+ Y KCG + +VF + +
Sbjct: 557 AHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLS 616
Query: 221 TAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIH-GLLW 279
A+IS A ++ + L+ + G + P+ +T + L AC+ + + +I ++
Sbjct: 617 NAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVS 676
Query: 280 KLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQ 339
K M+ L ++DL + G E A ++ E + LVA + E +
Sbjct: 677 KRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVD 736
Query: 340 IFTR 343
+R
Sbjct: 737 YLSR 740
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 99/226 (43%), Gaps = 26/226 (11%)
Query: 327 AFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKN--F 384
+ +NG +EA+ + T + + + + +L L GKQIH+ I+K +
Sbjct: 44 SLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFY 103
Query: 385 SQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEE 444
++N ++ L+ Y+KC L + +F ++ +N SW ++I R G AL + E
Sbjct: 104 ARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVE 163
Query: 445 MRVGGIAPTDVTFLSLLHACS-----------HAGLVEKGMEFLVSMTRDHRLSPRSEHY 493
M I P + ++ AC H +V+ G+E V +
Sbjct: 164 MLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVA------------ 211
Query: 494 ACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSE 539
+ + DM G+ G+L +A + +P+ R + W AL+ +G +E
Sbjct: 212 SSLADMYGKCGVLDDASKVFDEIPD-RNAVAWNALMVGYVQNGKNE 256
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 10/125 (8%)
Query: 38 NHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGE 97
N ++ LS C +LH+G +IH II+ S S + SL+ MY+KCG+
Sbjct: 545 NAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVS-------IETSLVDMYAKCGD 597
Query: 98 LQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTM 157
+ A K+F + N+MIS + + ++ + V + D T+T +
Sbjct: 598 INKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSL---EGVGLKPDNITITNV 654
Query: 158 LSACD 162
LSAC+
Sbjct: 655 LSACN 659
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 234 bits (598), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 142/442 (32%), Positives = 230/442 (52%), Gaps = 16/442 (3%)
Query: 200 GCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSL 259
G +VF EM+E+NVV WT++I+G N+ R F +SP L +
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYF------DLSPERDIVLWNT 95
Query: 260 MACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGV 319
M SG + + L ++ + D+ + +++ Y+ G +E ++F+ E +
Sbjct: 96 M-ISGYIEMGNMLEARSLFDQMPCR-DVMSWNTVLEGYANIGDMEACERVFDDMPERNVF 153
Query: 320 SLTVILVAFAQNGFEEEAIQIFTRIVTLG--IEVDANMVSAVLGVFGVGTSLPLGKQIHS 377
S ++ +AQNG E + F R+V G + DA M + +G + GK +H
Sbjct: 154 SWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLG-AFDFGKWVHK 212
Query: 378 LIIKKNFSQ-NPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGS 436
+++ + V N LI+MY KCG + +++VF + +++ ISWN++I A HG G+
Sbjct: 213 YGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGT 272
Query: 437 RALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACV 496
AL + EM+ GI+P VTF+ +L AC H GLVE G+ + SM D + P EH CV
Sbjct: 273 EALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCV 332
Query: 497 VDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASS 556
VD+L RAG L +A FI +P ++W LLGA ++ ++G+ A ++LI P +
Sbjct: 333 VDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNP 392
Query: 557 APHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQAD 616
A V+++NIY G++ + A M++ G KE GVSWIE D + F + HP+ +
Sbjct: 393 ANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTE 452
Query: 617 IIFLELSRLLKHLKDEGYVPDK 638
EL R+L+ LK + D+
Sbjct: 453 ----ELQRILRELKSFNILRDE 470
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 187/406 (46%), Gaps = 29/406 (7%)
Query: 88 LLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYS 147
L M G + A K+F M ++ V W SMI+G+L N+D + R+F +S R
Sbjct: 34 LFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYF-DLSPER---- 88
Query: 148 RFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFE-REITVGNALITSYFKCGCFCQGR 206
D TM+S + + M+ R++ N ++ Y G
Sbjct: 89 --DIVLWNTMISG-----YIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACE 141
Query: 207 QVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRG-GSVSPNTLTYLSSLMACSGV 265
+VFD+M ERNV +W +I G AQN + L F +M GSV PN T L AC+ +
Sbjct: 142 RVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKL 201
Query: 266 QALAEGRKIHGLLWKLGMQS-DLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVI 324
A G+ +H LG D+ +++AL+D+Y KCG++E A ++F+ + D +S +
Sbjct: 202 GAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTM 261
Query: 325 LVAFAQNGFEEEAIQIFTRIVTLGIEVD-ANMVSAVLGVFGVGTSLPLGKQIHSLIIKKN 383
+ A +G EA+ +F + GI D V + +G +S+ +
Sbjct: 262 INGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMF--TD 319
Query: 384 FSQNPFVSN--GLINMYSKCGELHDSLQVFYEMTQK-NSISWNSVIAA---FARHGDGSR 437
FS P + + ++++ S+ G L +++ +M K +++ W +++ A + + G
Sbjct: 320 FSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEV 379
Query: 438 ALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRD 483
AL+ E +++ P + LS ++ AG + V+M RD
Sbjct: 380 ALE--ELIKLEPRNPANFVMLSNIYG--DAGRFDDAARLKVAM-RD 420
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 169/376 (44%), Gaps = 49/376 (13%)
Query: 53 GNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRD 112
G + +G+ + AR + FD + WN++L Y+ G+++ ++FD MP R+
Sbjct: 99 GYIEMGNMLEARSL-------FDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERN 151
Query: 113 TVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRM 172
SWN +I G+ +N FK+M + +V + AT+T +LSAC +
Sbjct: 152 VFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVP--NDATMTLVLSACAKLGAFDFGKW 209
Query: 173 IHGLVFVGGFER-EITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNE 231
+H G+ + ++ V NALI Y KCG +VF + R++++W +I+GLA +
Sbjct: 210 VHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHG 269
Query: 232 LYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIES 291
+ L LF +M+ +SP+ +T++ L AC + + +G L + + +
Sbjct: 270 HGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDG---------LAYFNSMFTDF 320
Query: 292 ALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEV 351
++M CG ++ ++ GF +A++ + + ++
Sbjct: 321 SIMPEIEHCGC---------------------VVDLLSRAGFLTQAVEFINK---MPVKA 356
Query: 352 DANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVF 411
DA + + +LG V + +G+ +IK +NP L N+Y G D+ ++
Sbjct: 357 DAVIWATLLGASKVYKKVDIGEVALEELIKLE-PRNPANFVMLSNIYGDAGRFDDAARLK 415
Query: 412 YEM-----TQKNSISW 422
M ++ +SW
Sbjct: 416 VAMRDTGFKKEAGVSW 431
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 127/375 (33%), Positives = 212/375 (56%), Gaps = 2/375 (0%)
Query: 257 SSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEEL 316
S++ +C + G H L K G SD+ + S+L+ LY G +E A+++FE E
Sbjct: 125 SAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPER 184
Query: 317 DGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIH 376
+ VS T ++ FAQ + +++++++ + + +A+L +L G+ +H
Sbjct: 185 NVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVH 244
Query: 377 SLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGS 436
+ +SN LI+MY KCG+L D+ ++F + + K+ +SWNS+IA +A+HG
Sbjct: 245 CQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAM 304
Query: 437 RALQFYE-EMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYAC 495
+A++ +E M G P +T+L +L +C HAGLV++G +F ++ +H L P HY+C
Sbjct: 305 QAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFF-NLMAEHGLKPELNHYSC 363
Query: 496 VVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPAS 555
+VD+LGR GLL+EA IE +P ++W +LL +C +HGD G AA++ ++ P
Sbjct: 364 LVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDC 423
Query: 556 SAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQA 615
+A HV +AN+Y++ G WKE A K MK+KG+ G SWIEI+ V F D + +
Sbjct: 424 AATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNYVFMFKAEDGSNCRM 483
Query: 616 DIIFLELSRLLKHLK 630
I L L+ H++
Sbjct: 484 LEIVHVLHCLIDHME 498
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 157/298 (52%), Gaps = 2/298 (0%)
Query: 149 FDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQV 208
FD L++ + +C H L GGF ++ +G++L+ Y G +V
Sbjct: 118 FDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKV 177
Query: 209 FDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQAL 268
F+EM ERNVV+WTA+ISG AQ + L+L+++MR + PN T+ + L AC+G AL
Sbjct: 178 FEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGAL 237
Query: 269 AEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAF 328
+GR +H +G++S L I ++L+ +Y KCG L+ A++IF+ D VS ++ +
Sbjct: 238 GQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGY 297
Query: 329 AQNGFEEEAIQIFTRIV-TLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQN 387
AQ+G +AI++F ++ G + DA VL + G++ +L+ +
Sbjct: 298 AQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPE 357
Query: 388 PFVSNGLINMYSKCGELHDSLQVFYEMTQK-NSISWNSVIAAFARHGDGSRALQFYEE 444
+ L+++ + G L ++L++ M K NS+ W S++ + HGD ++ EE
Sbjct: 358 LNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEE 415
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 142/272 (52%), Gaps = 12/272 (4%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDA 101
LSS + CG + + GS H +K F S +++ +SL+ +Y GE+++A
Sbjct: 123 LSSAVRSCGLNRDFRTGSGFHCLALK-GGFIS-------DVYLGSSLVVLYRDSGEVENA 174
Query: 102 IKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSAC 161
K+F+ MP R+ VSW +MISGF + D + + +M +S S + T T +LSAC
Sbjct: 175 YKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKST---SDPNDYTFTALLSAC 231
Query: 162 DGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWT 221
G R +H G + + + N+LI+ Y KCG ++FD+ ++VV+W
Sbjct: 232 TGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWN 291
Query: 222 AVISGLAQNELYEDGLRLFAQMRGGS-VSPNTLTYLSSLMACSGVQALAEGRKIHGLLWK 280
++I+G AQ+ L + LF M S P+ +TYL L +C + EGRK L+ +
Sbjct: 292 SMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAE 351
Query: 281 LGMQSDLCIESALMDLYSKCGSLEGAWQIFES 312
G++ +L S L+DL + G L+ A ++ E+
Sbjct: 352 HGLKPELNHYSCLVDLLGRFGLLQEALELIEN 383
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 91/189 (48%), Gaps = 2/189 (1%)
Query: 348 GIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDS 407
G DA +S+ + G+ G H L +K F + ++ + L+ +Y GE+ ++
Sbjct: 115 GWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENA 174
Query: 408 LQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHA 467
+VF EM ++N +SW ++I+ FA+ L+ Y +MR P D TF +LL AC+ +
Sbjct: 175 YKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGS 234
Query: 468 GLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQA 527
G + +G + T L ++ M + G LK+A + N+ V+ W +
Sbjct: 235 GALGQGRS-VHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFS-NKDVVSWNS 292
Query: 528 LLGACSIHG 536
++ + HG
Sbjct: 293 MIAGYAQHG 301
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 93/199 (46%), Gaps = 11/199 (5%)
Query: 27 YPFPATSESVLNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWN 86
Y S S N ++LLS C G L G S+H + + ++ L + N
Sbjct: 209 YSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHM--------GLKSYLHISN 260
Query: 87 SLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVY 146
SL+SMY KCG+L+DA ++FD+ +D VSWNSMI+G+ ++ F+ M
Sbjct: 261 SLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSG-- 318
Query: 147 SRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGR 206
++ D T +LS+C R L+ G + E+ + L+ + G +
Sbjct: 319 TKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEAL 378
Query: 207 QVFDEM-IERNVVTWTAVI 224
++ + M ++ N V W +++
Sbjct: 379 ELIENMPMKPNSVIWGSLL 397
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 157/565 (27%), Positives = 272/565 (48%), Gaps = 56/565 (9%)
Query: 109 PVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSS 168
P + +N+MIS +++ F + M R R T L F S
Sbjct: 96 PNPNVFVYNTMISAVSSSKN--ECFGLYSSMIRHRVSPDR------QTFLYLMKASSFLS 147
Query: 169 VSRMIHGLVFVGGFEREITVGN----ALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVI 224
+ IH + V G +++GN +L+ Y + G F +VF M +V ++ +I
Sbjct: 148 EVKQIHCHIIVSGC---LSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMI 204
Query: 225 SGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLG-- 282
G A+ + L+L+ +M + P+ T LS L+ C + + G+ +HG + + G
Sbjct: 205 VGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPV 264
Query: 283 MQSDLCIESALMDLYSKC-------------------------------GSLEGAWQIFE 311
S+L + +AL+D+Y KC G +E A +F+
Sbjct: 265 YSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFD 324
Query: 312 SAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTS--L 369
+ D VS +L +++ G ++ ++ +T+ +V + V+ V + G + L
Sbjct: 325 QMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGEL 384
Query: 370 PLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAF 429
G+ +H L+I+ + F+S+ LI+MY KCG + + VF T+K+ W S+I
Sbjct: 385 SHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGL 444
Query: 430 ARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPR 489
A HG+G +ALQ + M+ G+ P +VT L++L ACSH+GLVE+G+ M P
Sbjct: 445 AFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPE 504
Query: 490 SEHYACVVDMLGRAGLLKEAKNFIE-GLPENRGVLVWQALLGACSIHGDSEMGKFAADQL 548
+EHY +VD+L RAG ++EAK+ ++ +P +W ++L AC D E + A +L
Sbjct: 505 TEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTEL 564
Query: 549 ILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVG 608
+ P +VL++NIY+ G+W + M+ +GV K G S + + + FV
Sbjct: 565 LKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAA 624
Query: 609 DKL-HPQADIIFLELSRLLKHLKDE 632
+K HP+ + E+ R+L+HL +E
Sbjct: 625 EKQNHPR----WTEIKRILQHLYNE 645
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 140/299 (46%), Gaps = 37/299 (12%)
Query: 44 SLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIK 103
SLL CG ++ LG +H I ++ P +S + L + N+LL MY KC E A +
Sbjct: 237 SLLVCCGHLSDIRLGKGVHGWIERRGPVYS------SNLILSNALLDMYFKCKESGLAKR 290
Query: 104 LFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMS-------------------ESRT 144
FD M +D SWN+M+ GF+R D +A F QM + RT
Sbjct: 291 AFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRT 350
Query: 145 VYSRF-----------DKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALI 193
V F D+ T+ +++S S R +HGLV + + + +ALI
Sbjct: 351 VRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALI 410
Query: 194 TSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTL 253
Y KCG + VF E++V WT++I+GLA + + L+LF +M+ V+PN +
Sbjct: 411 DMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNV 470
Query: 254 TYLSSLMACSGVQALAEGRKIHGLLW-KLGMQSDLCIESALMDLYSKCGSLEGAWQIFE 311
T L+ L ACS + EG + + K G + +L+DL + G +E A I +
Sbjct: 471 TLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQ 529
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 183/387 (47%), Gaps = 47/387 (12%)
Query: 83 FVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNR-DFDAGFRFFKQMSE 141
++WNSL+ Y + G A K+F RMP D S+N MI G+ + +A +FK +S+
Sbjct: 167 YLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSD 226
Query: 142 SRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGG--FEREITVGNALITSYFKC 199
D+ T+ ++L C + + +HG + G + + + NAL+ YFKC
Sbjct: 227 GIEP----DEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKC 282
Query: 200 -------------------------------GCFCQGRQVFDEMIERNVVTWTAVISGLA 228
G + VFD+M +R++V+W +++ G +
Sbjct: 283 KESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYS 342
Query: 229 QNELYEDGLR-LFAQMR-GGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSD 286
+ + +R LF +M V P+ +T +S + + L+ GR +HGL+ +L ++ D
Sbjct: 343 KKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGD 402
Query: 287 LCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVT 346
+ SAL+D+Y KCG +E A+ +F++A E D T ++ A +G ++A+Q+F R+
Sbjct: 403 AFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQE 462
Query: 347 LGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSN--GLINMYSKCG-- 402
G+ + + AVL + G + + +K F +P + L+++ + G
Sbjct: 463 EGVTPNNVTLLAVLTACSHSGLVEEGLHVFNH-MKDKFGFDPETEHYGSLVDLLCRAGRV 521
Query: 403 -ELHDSLQVFYEMTQKNSISWNSVIAA 428
E D +Q M S+ W S+++A
Sbjct: 522 EEAKDIVQKKMPMRPSQSM-WGSILSA 547
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 161/613 (26%), Positives = 290/613 (47%), Gaps = 54/613 (8%)
Query: 43 SSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAI 102
+SLLS C G +HA I FDS + L++ YS L +A
Sbjct: 87 ASLLSTCVGFNEFVPGQQLHAHCISSG--LEFDS------VLVPKLVTFYSAFNLLDEAQ 138
Query: 103 KLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACD 162
+ + + + WN +I ++RN+ F +K+M S+ + R D+ T +++ AC
Sbjct: 139 TITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMM-SKGI--RADEFTYPSVIKACA 195
Query: 163 GPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTA 222
+ R++HG + V + V NALI+ Y + G R++FD M ER+ V+W A
Sbjct: 196 ALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNA 255
Query: 223 VISGLAQNELYEDGLRLFAQM-----------------------------------RGGS 247
+I+ E + +L +M R +
Sbjct: 256 IINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCN 315
Query: 248 VSPNTLTYLSSLMACSGVQALAEGRKIHGLLWK-LGMQSDL-CIESALMDLYSKCGSLEG 305
V ++ ++ L ACS + AL G+ H L+ + D+ + ++L+ +YS+C L
Sbjct: 316 VRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRH 375
Query: 306 AWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGV 365
A+ +F+ E + I+ FA N EE + ++ G + ++++L +F
Sbjct: 376 AFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFAR 435
Query: 366 GTSLPLGKQIHSLIIKKNFSQNPFVS-NGLINMYSKCGELHDSLQVFYEMTQKNSISWNS 424
+L GK+ H I+++ ++ + N L++MY+K GE+ + +VF M +++ +++ S
Sbjct: 436 VGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTS 495
Query: 425 VIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDH 484
+I + R G G AL ++++M GI P VT +++L ACSH+ LV +G M
Sbjct: 496 LIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVF 555
Query: 485 RLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFA 544
+ R EHY+C+VD+ RAG L +A++ +P + LL AC IHG++ +G++A
Sbjct: 556 GIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWA 615
Query: 545 ADQLIL-AAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVS 603
AD+L+L P ++L+A++Y+ G W + + + GV K + +E D ++
Sbjct: 616 ADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSELD 675
Query: 604 SFVVGDKLHPQAD 616
G+ P D
Sbjct: 676 ----GENNKPMND 684
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 124/256 (48%), Gaps = 3/256 (1%)
Query: 227 LAQNELYEDGLRLFAQMRGGSVSPNTLTYLSS--LMACSGVQALAEGRKIHGLLWKLGMQ 284
++ +LYE R F+ +R S S + Y S+ L C G G+++H G++
Sbjct: 57 ISHGQLYE-AFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLE 115
Query: 285 SDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRI 344
D + L+ YS L+ A I E++E L + V++ ++ +N +E++ ++ R+
Sbjct: 116 FDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRM 175
Query: 345 VTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGEL 404
++ GI D +V+ G+ +H I + N +V N LI+MY + G++
Sbjct: 176 MSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKV 235
Query: 405 HDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHAC 464
+ ++F M++++++SWN++I + A + + M + G+ + VT+ ++ C
Sbjct: 236 DVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGC 295
Query: 465 SHAGLVEKGMEFLVSM 480
AG + +V M
Sbjct: 296 LEAGNYIGALNCVVGM 311
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 86/176 (48%), Gaps = 17/176 (9%)
Query: 38 NHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGE 97
NH L+S+L + R GNL G H I+++ + ++ L +WNSL+ MY+K GE
Sbjct: 422 NHITLASILPLFARVGNLQHGKEFHCYILRRQSY-------KDCLILWNSLVDMYAKSGE 474
Query: 98 LQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTM 157
+ A ++FD M RD V++ S+I G+ R + +FK M S + D T+ +
Sbjct: 475 IIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGI---KPDHVTMVAV 531
Query: 158 LSACDGPEFSSVSRMIHGLV----FVGGFEREITVGNALITSYFKCGCFCQGRQVF 209
LSAC S++ R H L V G + + ++ Y + G + R +F
Sbjct: 532 LSACS---HSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIF 584
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 161/613 (26%), Positives = 290/613 (47%), Gaps = 54/613 (8%)
Query: 43 SSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAI 102
+SLLS C G +HA I FDS + L++ YS L +A
Sbjct: 87 ASLLSTCVGFNEFVPGQQLHAHCISSG--LEFDS------VLVPKLVTFYSAFNLLDEAQ 138
Query: 103 KLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACD 162
+ + + + WN +I ++RN+ F +K+M S+ + R D+ T +++ AC
Sbjct: 139 TITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMM-SKGI--RADEFTYPSVIKACA 195
Query: 163 GPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTA 222
+ R++HG + V + V NALI+ Y + G R++FD M ER+ V+W A
Sbjct: 196 ALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNA 255
Query: 223 VISGLAQNELYEDGLRLFAQM-----------------------------------RGGS 247
+I+ E + +L +M R +
Sbjct: 256 IINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCN 315
Query: 248 VSPNTLTYLSSLMACSGVQALAEGRKIHGLLWK-LGMQSDL-CIESALMDLYSKCGSLEG 305
V ++ ++ L ACS + AL G+ H L+ + D+ + ++L+ +YS+C L
Sbjct: 316 VRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRH 375
Query: 306 AWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGV 365
A+ +F+ E + I+ FA N EE + ++ G + ++++L +F
Sbjct: 376 AFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFAR 435
Query: 366 GTSLPLGKQIHSLIIKKNFSQNPFVS-NGLINMYSKCGELHDSLQVFYEMTQKNSISWNS 424
+L GK+ H I+++ ++ + N L++MY+K GE+ + +VF M +++ +++ S
Sbjct: 436 VGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTS 495
Query: 425 VIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDH 484
+I + R G G AL ++++M GI P VT +++L ACSH+ LV +G M
Sbjct: 496 LIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVF 555
Query: 485 RLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFA 544
+ R EHY+C+VD+ RAG L +A++ +P + LL AC IHG++ +G++A
Sbjct: 556 GIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWA 615
Query: 545 ADQLIL-AAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVS 603
AD+L+L P ++L+A++Y+ G W + + + GV K + +E D ++
Sbjct: 616 ADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSELD 675
Query: 604 SFVVGDKLHPQAD 616
G+ P D
Sbjct: 676 ----GENNKPMND 684
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 124/256 (48%), Gaps = 3/256 (1%)
Query: 227 LAQNELYEDGLRLFAQMRGGSVSPNTLTYLSS--LMACSGVQALAEGRKIHGLLWKLGMQ 284
++ +LYE R F+ +R S S + Y S+ L C G G+++H G++
Sbjct: 57 ISHGQLYE-AFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLE 115
Query: 285 SDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRI 344
D + L+ YS L+ A I E++E L + V++ ++ +N +E++ ++ R+
Sbjct: 116 FDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRM 175
Query: 345 VTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGEL 404
++ GI D +V+ G+ +H I + N +V N LI+MY + G++
Sbjct: 176 MSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKV 235
Query: 405 HDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHAC 464
+ ++F M++++++SWN++I + A + + M + G+ + VT+ ++ C
Sbjct: 236 DVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGC 295
Query: 465 SHAGLVEKGMEFLVSM 480
AG + +V M
Sbjct: 296 LEAGNYIGALNCVVGM 311
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 86/176 (48%), Gaps = 17/176 (9%)
Query: 38 NHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGE 97
NH L+S+L + R GNL G H I+++ + ++ L +WNSL+ MY+K GE
Sbjct: 422 NHITLASILPLFARVGNLQHGKEFHCYILRRQSY-------KDCLILWNSLVDMYAKSGE 474
Query: 98 LQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTM 157
+ A ++FD M RD V++ S+I G+ R + +FK M S + D T+ +
Sbjct: 475 IIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGI---KPDHVTMVAV 531
Query: 158 LSACDGPEFSSVSRMIHGLV----FVGGFEREITVGNALITSYFKCGCFCQGRQVF 209
LSAC S++ R H L V G + + ++ Y + G + R +F
Sbjct: 532 LSACS---HSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIF 584
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 154/511 (30%), Positives = 255/511 (49%), Gaps = 52/511 (10%)
Query: 96 GELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLT 155
G L+ A KLFD +P D N ++ G ++ + + +M E R V D+ T T
Sbjct: 60 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEM-EKRGVSP--DRYTFT 116
Query: 156 TMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIER 215
+L AC E+ S HG V GF V NALI + CG ++FD+ +
Sbjct: 117 FVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKA 176
Query: 216 NVVTWTAVISGLAQNELYEDGLRLFAQM-RGGSVSPNTLTYLSSLMACSGVQALAEGRKI 274
+ V W+++ SG A+ ++ +RLF +M V+ N + I
Sbjct: 177 HKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVM--------------------I 216
Query: 275 HGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFE 334
G L KC ++ A ++F+ E D V+ ++ + G+
Sbjct: 217 TGCL--------------------KCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYP 256
Query: 335 EEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKK-NFSQNPFVS-- 391
+EA+ IF + G D + ++L V L GK++H I++ + S + +V
Sbjct: 257 KEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTP 316
Query: 392 --NGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFA-RHGDGSRALQFYEEMRVG 448
N LI+MY+KCG + +++VF + ++ +WN++I A H +GS ++ +EEM+
Sbjct: 317 IWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHHAEGS--IEMFEEMQRL 374
Query: 449 GIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKE 508
+ P +VTF+ ++ ACSH+G V++G ++ M + + P +HY C+VDMLGRAG L+E
Sbjct: 375 KVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEE 434
Query: 509 AKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSA 568
A F+E + +VW+ LLGAC I+G+ E+GK+A ++L+ S +VL++NIY++
Sbjct: 435 AFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYAS 494
Query: 569 EGKWKERAGAIKRMKEKGVAKEVGVSWIEID 599
G+W K + V K GVS IE D
Sbjct: 495 TGQWDGVQKVRKMFDDTRVKKPTGVSLIEED 525
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 130/273 (47%), Gaps = 35/273 (12%)
Query: 74 FDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGF 133
FD S + W+S+ S Y+K G++ +A++LFD MP +D V+WN MI+G L+ ++ D+
Sbjct: 170 FDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSAR 229
Query: 134 RFFKQMSESRTV-------------YSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVG 180
F + +E V Y + M A + P+ ++ ++ +G
Sbjct: 230 ELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLG 289
Query: 181 GFER----------------EITVG----NALITSYFKCGCFCQGRQVFDEMIERNVVTW 220
E I VG NALI Y KCG + +VF + +R++ TW
Sbjct: 290 DLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTW 349
Query: 221 TAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWK 280
+I GLA + E + +F +M+ V PN +T++ ++ACS + EGRK L+
Sbjct: 350 NTLIVGLALHHA-EGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRD 408
Query: 281 L-GMQSDLCIESALMDLYSKCGSLEGAWQIFES 312
+ ++ ++ ++D+ + G LE A+ ES
Sbjct: 409 MYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVES 441
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 164/371 (44%), Gaps = 46/371 (12%)
Query: 171 RMIHGLVFVGGFEREITVGNALI--TSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLA 228
+ IH + V G ++V LI S G ++FDE+ + +V V+ G A
Sbjct: 29 KQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGSA 88
Query: 229 QNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLC 288
Q+ E + L+ +M VSP+ T+ L ACS ++ + G HG + + G +
Sbjct: 89 QSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEY 148
Query: 289 IESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLG 348
+++AL+ ++ CG L A ++F+ + + V+ + + +A+ G +EA+++F
Sbjct: 149 VKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLF------- 201
Query: 349 IEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSL 408
+P Q+ N +I KC E+ +
Sbjct: 202 ------------------DEMPYKDQV--------------AWNVMITGCLKCKEMDSAR 229
Query: 409 QVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAG 468
++F T+K+ ++WN++I+ + G AL ++EMR G P VT LSLL AC+ G
Sbjct: 230 ELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLG 289
Query: 469 LVEKGMEFLVSMTRDHRLSPR----SEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLV 524
+E G + + +S + + ++DM + G + A G+ ++R +
Sbjct: 290 DLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGV-KDRDLST 348
Query: 525 WQALLGACSIH 535
W L+ ++H
Sbjct: 349 WNTLIVGLALH 359
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 114/267 (42%), Gaps = 43/267 (16%)
Query: 44 SLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIK 103
SLLS C G+L G +H I++ S SS +WN+L+ MY+KCG + AI+
Sbjct: 280 SLLSACAVLGDLETGKRLHIYILETA---SVSSSIYVGTPIWNALIDMYAKCGSIDRAIE 336
Query: 104 LFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDG 163
+F + RD +WN++I G L + F++M + V+ ++ T ++ AC
Sbjct: 337 VFRGVKDRDLSTWNTLIVG-LALHHAEGSIEMFEEMQRLK-VWP--NEVTFIGVILAC-- 390
Query: 164 PEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAV 223
S R+ G + F R +++ IE N+ + +
Sbjct: 391 ---SHSGRVDEGRKY-----------------------FSLMRDMYN--IEPNIKHYGCM 422
Query: 224 ISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGM 283
+ L + E+ M+ + PN + + + L AC + G+ + L L M
Sbjct: 423 VDMLGRAGQLEEAFMFVESMK---IEPNAIVWRTLLGACKIYGNVELGKYANEKL--LSM 477
Query: 284 QSDLCIESALM-DLYSKCGSLEGAWQI 309
+ D + L+ ++Y+ G +G ++
Sbjct: 478 RKDESGDYVLLSNIYASTGQWDGVQKV 504
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 232 bits (592), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 135/433 (31%), Positives = 221/433 (51%), Gaps = 33/433 (7%)
Query: 219 TWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLL 278
T +S L + + + ++ ++ P+T T+ L V + GR+IHG +
Sbjct: 83 TMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQV 142
Query: 279 WKLGMQSDLCIESALMDLYSKCGSLEGAWQIFE------------------SAEELDG-- 318
G S + + + L+ +Y CG L A ++F+ E+D
Sbjct: 143 VVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEAR 202
Query: 319 -------------VSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGV 365
VS T ++ +A++G EAI++F R++ +E D + AVL
Sbjct: 203 SLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACAD 262
Query: 366 GTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSV 425
SL LG++I S + + ++ ++N +I+MY+K G + +L VF + ++N ++W ++
Sbjct: 263 LGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTI 322
Query: 426 IAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHR 485
IA A HG G+ AL + M G+ P DVTF+++L ACSH G V+ G SM +
Sbjct: 323 IAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYG 382
Query: 486 LSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAA 545
+ P EHY C++D+LGRAG L+EA I+ +P +W +LL A ++H D E+G+ A
Sbjct: 383 IHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERAL 442
Query: 546 DQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSF 605
+LI P +S ++L+AN+YS G+W E MK GV K G S IE++ +V F
Sbjct: 443 SELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKF 502
Query: 606 VVGDKLHPQADII 618
+ GD HPQ + I
Sbjct: 503 ISGDLTHPQVERI 515
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 171/385 (44%), Gaps = 38/385 (9%)
Query: 93 SKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKA 152
S G L+ A +F P +T N+MI + +A + + ++ D
Sbjct: 58 SNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTF 117
Query: 153 TLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEM 212
T +L R IHG V V GF+ + V LI YF CG R++FDEM
Sbjct: 118 TFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEM 177
Query: 213 IE---------------------------------RNVVTWTAVISGLAQNELYEDGLRL 239
+ RN V+WT VISG A++ + + +
Sbjct: 178 LVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEV 237
Query: 240 FAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSK 299
F +M +V P+ +T L+ L AC+ + +L G +I + GM + + +A++D+Y+K
Sbjct: 238 FQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAK 297
Query: 300 CGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAV 359
G++ A +FE E + V+ T I+ A +G EA+ +F R+V G+ + A+
Sbjct: 298 SGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAI 357
Query: 360 LGVFGVGTSLPLGKQI-HSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQK- 417
L + LGK++ +S+ K N +I++ + G+L ++ +V M K
Sbjct: 358 LSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKA 417
Query: 418 NSISWNSVIAAFARHGD---GSRAL 439
N+ W S++AA H D G RAL
Sbjct: 418 NAAIWGSLLAASNVHHDLELGERAL 442
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 142/299 (47%), Gaps = 39/299 (13%)
Query: 45 LLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKL 104
+L + R ++ G IH +++ F FDSS + V L+ MY CG L DA K+
Sbjct: 122 VLKIAVRVSDVWFGRQIHGQVV----VFGFDSS----VHVVTGLIQMYFSCGGLGDARKM 173
Query: 105 FDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQM-----------------------SE 141
FD M V+D WN++++G+ + + D + M SE
Sbjct: 174 FDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASE 233
Query: 142 SRTVYSRF-------DKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALIT 194
+ V+ R D+ TL +LSAC + I V G R +++ NA+I
Sbjct: 234 AIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVID 293
Query: 195 SYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLT 254
Y K G + VF+ + ERNVVTWT +I+GLA + + L +F +M V PN +T
Sbjct: 294 MYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVT 353
Query: 255 YLSSLMACSGVQALAEGRKI-HGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFES 312
+++ L ACS V + G+++ + + K G+ ++ ++DL + G L A ++ +S
Sbjct: 354 FIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKS 412
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 232 bits (591), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 146/512 (28%), Positives = 248/512 (48%), Gaps = 10/512 (1%)
Query: 88 LLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYS 147
L Y+ +L A KLFD P R WNS+I + + F F Q+ S T
Sbjct: 46 LARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPD 105
Query: 148 RFDKATLTTMLSACDGPEFSSVS-RMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGR 206
F A L S F + R IHG+ V G + G+A++ +Y K G +
Sbjct: 106 NFTYACLARGFS----ESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEAS 161
Query: 207 QVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQ 266
++F + + ++ W +I G ++ G+ LF M+ PN T ++
Sbjct: 162 KLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPS 221
Query: 267 ALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILV 326
L +H K+ + S + AL+++YS+C + A +F S E D V+ + ++
Sbjct: 222 LLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLIT 281
Query: 327 AFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQ 386
+++ G +EA+ +F + G + D +V+ VLG + GK++HS +I+
Sbjct: 282 GYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLEL 341
Query: 387 NPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMR 446
+ V + LI+MYSKCG L ++ +F + +KN +S+NS+I HG S A + + E+
Sbjct: 342 DIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEIL 401
Query: 447 VGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLL 506
G+ P ++TF +LL C H+GL+ KG E M + + P++EHY +V ++G AG L
Sbjct: 402 EMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKL 461
Query: 507 KEAKNFIEGL--PENRGVLVWQALLGACSIHGDSEMGKFAADQLIL-AAPASSAPHVLMA 563
+EA F+ L P + G+L ALL C +H ++ + + A+ + S V+++
Sbjct: 462 EEAFEFVMSLQKPIDSGIL--GALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLS 519
Query: 564 NIYSAEGKWKERAGAIKRMKEKGVAKEVGVSW 595
N+Y+ G+W E + E K G+SW
Sbjct: 520 NVYARYGRWDEVERLRDGISESYGGKLPGISW 551
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 147/306 (48%), Gaps = 10/306 (3%)
Query: 86 NSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTV 145
++++ YSK G + +A KLF +P D WN MI G+ +D G F M
Sbjct: 145 SAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQH---- 200
Query: 146 YSRFDKATLTTMLSACDG---PEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCF 202
R + TM++ G P V+ +H + VG AL+ Y +C C
Sbjct: 201 --RGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCI 258
Query: 203 CQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMAC 262
VF+ + E ++V +++I+G ++ +++ L LFA++R P+ + L +C
Sbjct: 259 ASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSC 318
Query: 263 SGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLT 322
+ + G+++H + +LG++ D+ + SAL+D+YSKCG L+ A +F E + VS
Sbjct: 319 AELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFN 378
Query: 323 VILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKK 382
+++ +GF A + FT I+ +G+ D SA+L L G++I +K
Sbjct: 379 SLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFER-MKS 437
Query: 383 NFSQNP 388
F P
Sbjct: 438 EFGIEP 443
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 119/262 (45%), Gaps = 22/262 (8%)
Query: 60 SIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSM 119
S+HA +K + DS +V +L++MYS+C + A +F+ + D V+ +S+
Sbjct: 228 SVHAFCLK----INLDSHS----YVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSL 279
Query: 120 ISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFV 179
I+G+ R + F +E R + D + +L +C S + +H V
Sbjct: 280 ITGYSRCGNHKEALHLF---AELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIR 336
Query: 180 GGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRL 239
G E +I V +ALI Y KCG +F + E+N+V++ ++I GL +
Sbjct: 337 LGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEK 396
Query: 240 FAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESA------L 293
F ++ + P+ +T+ + L C L +G++I M+S+ IE +
Sbjct: 397 FTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFE-----RMKSEFGIEPQTEHYVYM 451
Query: 294 MDLYSKCGSLEGAWQIFESAEE 315
+ L G LE A++ S ++
Sbjct: 452 VKLMGMAGKLEEAFEFVMSLQK 473
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 231 bits (590), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 149/520 (28%), Positives = 261/520 (50%), Gaps = 11/520 (2%)
Query: 83 FVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSES 142
F + LL+ +S +++ A +F+ + + +N+MI G+ + + + F F Q+
Sbjct: 61 FAVSKLLA-FSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAK 119
Query: 143 RTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCF 202
RF + T L +C S+ +HG+ GF + NALI Y CG
Sbjct: 120 GLTLDRF---SFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKI 176
Query: 203 CQGRQVFDEMIER-NVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMA 261
R+VFDEM + + VT++ +++G Q L LF MR V N T LS L A
Sbjct: 177 SDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSA 236
Query: 262 CSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSL 321
S + L+ H L K+G+ DL + +AL+ +Y K G + A +IF+ A D V+
Sbjct: 237 ISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTW 296
Query: 322 TVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIK 381
++ +A+ G EE + + ++ ++ +++ +L + +G+ + L+ +
Sbjct: 297 NCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEE 356
Query: 382 KNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQF 441
+ + + + L++MY+K G L ++++F M K+ SW ++I+ + HG A+
Sbjct: 357 ERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTL 416
Query: 442 YEEMRVGG--IAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDM 499
+ +M + P ++TFL +L+ACSH GLV +G+ M + +P+ EHY CVVD+
Sbjct: 417 FNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDL 476
Query: 500 LGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPH 559
LGRAG L+EA I LP W+ALL AC ++G++++G+ +L A
Sbjct: 477 LGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADA 536
Query: 560 VLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEID 599
+L+A ++ G ++ ++ KG KE G S IEI+
Sbjct: 537 ILLAGTHAVAGNPEK---SLDNELNKG-RKEAGYSAIEIE 572
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 123/478 (25%), Positives = 226/478 (47%), Gaps = 25/478 (5%)
Query: 7 FNTHLPSWVDSLKSKAPISQYPFPATSESVLNHAHLSSLLSVCGRDGNLHLGSSIHARII 66
FNT + + S + + S + L+ + L C R+ + +G +H I
Sbjct: 93 FNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHG-IA 151
Query: 67 KQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVR-DTVSWNSMISGFLR 125
+ F F R N+L+ Y CG++ DA K+FD MP D V+++++++G+L+
Sbjct: 152 LRSGFMVFTDLR-------NALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQ 204
Query: 126 NRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFERE 185
F+ M +S V + +TL + LSA S + H L G + +
Sbjct: 205 VSKKALALDLFRIMRKSEVV---VNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLD 261
Query: 186 ITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRG 245
+ + ALI Y K G R++FD I ++VVTW +I A+ L E+ + L QM+
Sbjct: 262 LHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKY 321
Query: 246 GSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEG 305
+ PN+ T++ L +C+ +A GR + LL + + D + +AL+D+Y+K G LE
Sbjct: 322 EKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEK 381
Query: 306 AWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVS--AVLGVF 363
A +IF ++ D S T ++ + +G EA+ +F ++ +V N ++ VL
Sbjct: 382 AVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNAC 441
Query: 364 GVGTSLPLGKQIHSLIIKKNFSQNPFVSN--GLINMYSKCGELHDSLQVFYEM-TQKNSI 420
G + G + +++ +S P V + ++++ + G+L ++ ++ + +S
Sbjct: 442 SHGGLVMEGIRCFKRMVEA-YSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDST 500
Query: 421 SWNSVIAAFARHGD---GSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGME 475
+W +++AA +G+ G + EM G P D L+ HA AG EK ++
Sbjct: 501 AWRALLAACRVYGNADLGESVMMRLAEM--GETHPADAILLAGTHAV--AGNPEKSLD 554
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 143/477 (29%), Positives = 238/477 (49%), Gaps = 11/477 (2%)
Query: 37 LNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCG 96
LN LS++ L G HA IK F N++F+ SL+ MY KCG
Sbjct: 212 LNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLF--------NSVFLKTSLVDMYFKCG 263
Query: 97 ELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTT 156
++ A ++FD + RD V W +MI+G N+ F+ M +Y + LTT
Sbjct: 264 KVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYP--NSVILTT 321
Query: 157 MLSACDGPEFSSVSRMIHGLVFVG-GFEREITVGNALITSYFKCGCFCQGRQVFDEMIER 215
+L + + + +H V + + V + LI Y KCG GR+VF +R
Sbjct: 322 ILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQR 381
Query: 216 NVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIH 275
N ++WTA++SG A N ++ LR M+ P+ +T + L C+ ++A+ +G++IH
Sbjct: 382 NAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIH 441
Query: 276 GLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEE 335
K ++ + ++LM +YSKCG E ++F+ E+ + + T ++ + +N
Sbjct: 442 CYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLR 501
Query: 336 EAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLI 395
I++F ++ D+ + VL V +L LGK++H I+KK F PFVS +I
Sbjct: 502 AGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARII 561
Query: 396 NMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDV 455
MY KCG+L + F + K S++W ++I A+ + A+ +E+M G P
Sbjct: 562 KMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTF 621
Query: 456 TFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNF 512
TF ++L CS AG V++ F M R + L P EHY+ V+++L R G ++EA+
Sbjct: 622 TFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 140/510 (27%), Positives = 233/510 (45%), Gaps = 39/510 (7%)
Query: 37 LNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNAL----FVWNSLLSMY 92
+N S+LL C R +L G +H I R N L F+ L+ MY
Sbjct: 109 VNATTFSALLEACVRRKSLLHGKQVHVHI------------RINGLESNEFLRTKLVHMY 156
Query: 93 SKCGELQDAIKLFDRMPVRDTVSWNSM-----ISGFLRNRDFDAGFRFFKQMSESRTVYS 147
+ CG ++DA K+FD + SWN++ ISG R +D + F +++ VYS
Sbjct: 157 TACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYS 216
Query: 148 RFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQ 207
L+ + + G H L G + + +L+ YFKCG R+
Sbjct: 217 ------LSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARR 270
Query: 208 VFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQM-RGGSVSPNTLTYLSSLMACSGVQ 266
VFDE++ER++V W A+I+GLA N+ + L LF M + PN++ + L V+
Sbjct: 271 VFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVK 330
Query: 267 ALAEGRKIHG-LLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVIL 325
AL G+++H +L + S L+DLY KCG + ++F +++ + +S T ++
Sbjct: 331 ALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALM 390
Query: 326 VAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFS 385
+A NG ++A++ + G D ++ VL V ++ GK+IH +K F
Sbjct: 391 SGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFL 450
Query: 386 QNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEM 445
N + L+ MYSKCG +++F + Q+N +W ++I + + D ++ + M
Sbjct: 451 PNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLM 510
Query: 446 RVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHY----ACVVDMLG 501
+ P VT +L CS ++ G E H L E A ++ M G
Sbjct: 511 LLSKHRPDSVTMGRVLTVCSDLKALKLGKEL-----HGHILKKEFESIPFVSARIIKMYG 565
Query: 502 RAGLLKEAKNFIEGLPENRGVLVWQALLGA 531
+ G L+ A NF +G L W A++ A
Sbjct: 566 KCGDLRSA-NFSFDAVAVKGSLTWTAIIEA 594
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 148/311 (47%), Gaps = 5/311 (1%)
Query: 229 QNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLC 288
QN L E L + + + N T+ + L AC ++L G+++H + G++S+
Sbjct: 89 QNNL-EVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEF 147
Query: 289 IESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFE--EEAIQIFTRIVT 346
+ + L+ +Y+ CGS++ A ++F+ + + S +L +G + ++ + FT +
Sbjct: 148 LRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRE 207
Query: 347 LGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHD 406
LG++++ +S V F ++L G + H+L IK + F+ L++MY KCG++
Sbjct: 208 LGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGL 267
Query: 407 SLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEM-RVGGIAPTDVTFLSLLHACS 465
+ +VF E+ +++ + W ++IA A + AL + M I P V ++L
Sbjct: 268 ARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLG 327
Query: 466 HAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVW 525
++ G E + + + ++ ++D+ + G + + G + R + W
Sbjct: 328 DVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYG-SKQRNAISW 386
Query: 526 QALLGACSIHG 536
AL+ + +G
Sbjct: 387 TALMSGYAANG 397
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 22/214 (10%)
Query: 328 FAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQN 387
FA+ E A+ I + GI V+A SA+L SL GKQ+H I N
Sbjct: 86 FARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESN 145
Query: 388 PFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWN-----SVIAAFARHGDGSRALQFY 442
F+ L++MY+ CG + D+ +VF E T N SWN +VI+ R+ D L +
Sbjct: 146 EFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQD---VLSTF 202
Query: 443 EEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACV------ 496
EMR G+ + ++ + + A + +G+ + H L+ ++ + V
Sbjct: 203 TEMRELGVDLNVYSLSNVFKSFAGASALRQGL-------KTHALAIKNGLFNSVFLKTSL 255
Query: 497 VDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLG 530
VDM + G + A+ + + E R ++VW A++
Sbjct: 256 VDMYFKCGKVGLARRVFDEIVE-RDIVVWGAMIA 288
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 11/153 (7%)
Query: 14 WVDSLKSKAPISQYPFPATSESVLNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFS 73
+V++ +A I + S+ + + +L+VC L LG +H I+K+
Sbjct: 494 YVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKK----E 549
Query: 74 FDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGF 133
F+S FV ++ MY KCG+L+ A FD + V+ +++W ++I + N F
Sbjct: 550 FES----IPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAI 605
Query: 134 RFFKQMSESRTVYSRFDKATLTTMLSACDGPEF 166
F+QM + F T T +LS C F
Sbjct: 606 NCFEQMVSRGFTPNTF---TFTAVLSICSQAGF 635
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 229 bits (583), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 129/394 (32%), Positives = 210/394 (53%), Gaps = 4/394 (1%)
Query: 245 GGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLE 304
G V P T L L C + +G++IH ++ +G + ++ L+ LY+ G L+
Sbjct: 103 GLQVEPETYAVL--LQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQ 160
Query: 305 GAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFG 364
A +F S + D + ++ + Q G E+E + I+ + I D ++V
Sbjct: 161 TAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACS 220
Query: 365 VGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNS 424
L GK+ H+++IK+ N V + L++MY KC D +VF +++ +N I+W S
Sbjct: 221 ALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTS 280
Query: 425 VIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDH 484
+I+ + HG S L+ +E+M+ G P VTFL +L AC+H GLV+KG E SM RD+
Sbjct: 281 LISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDY 340
Query: 485 RLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFA 544
+ P +HYA +VD LGRAG L+EA F+ P VW +LLGAC IHG+ ++ + A
Sbjct: 341 GIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELA 400
Query: 545 ADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKR-MKEKGVAKEVGVSWIEIDKQVS 603
A + + P + +V+ AN Y++ G +E A ++R M+ GV K+ G S IE+ +V
Sbjct: 401 ATKFLELDPTNGGNYVVFANGYASCG-LREAASKVRRKMENAGVKKDPGYSQIELQGEVH 459
Query: 604 SFVVGDKLHPQADIIFLELSRLLKHLKDEGYVPD 637
F+ D H ++ I+ ++ + D Y PD
Sbjct: 460 RFMKDDTSHRLSEKIYKKVHEMTSFFMDIDYYPD 493
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 131/265 (49%), Gaps = 12/265 (4%)
Query: 45 LLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKL 104
LL C + G IHA++ F+ + ++ LL +Y+ G+LQ A L
Sbjct: 114 LLQECKQRKEYTKGKRIHAQMFVVG--FALNE------YLKVKLLILYALSGDLQTAGIL 165
Query: 105 FDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGP 164
F + +RD + WN+MISG+++ G + M ++R V D+ T ++ AC
Sbjct: 166 FRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVP---DQYTFASVFRACSAL 222
Query: 165 EFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVI 224
+ + H ++ + I V +AL+ YFKC F G +VFD++ RNV+TWT++I
Sbjct: 223 DRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLI 282
Query: 225 SGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEG-RKIHGLLWKLGM 283
SG + + L+ F +M+ PN +T+L L AC+ + +G + + G+
Sbjct: 283 SGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGI 342
Query: 284 QSDLCIESALMDLYSKCGSLEGAWQ 308
+ + +A++D + G L+ A++
Sbjct: 343 EPEGQHYAAMVDTLGRAGRLQEAYE 367
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 133/285 (46%), Gaps = 4/285 (1%)
Query: 153 TLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEM 212
T +L C + + + IH +FV GF + L+ Y G +F +
Sbjct: 110 TYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSL 169
Query: 213 IERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGR 272
R+++ W A+ISG Q L ++GL ++ MR + P+ T+ S ACS + L G+
Sbjct: 170 KIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGK 229
Query: 273 KIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNG 332
+ H ++ K ++S++ ++SAL+D+Y KC S ++F+ + ++ T ++ + +G
Sbjct: 230 RAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHG 289
Query: 333 FEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSN 392
E ++ F ++ G + VL G + G + H +K+++ P +
Sbjct: 290 KVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWE-HFYSMKRDYGIEPEGQH 348
Query: 393 --GLINMYSKCGELHDSLQ-VFYEMTQKNSISWNSVIAAFARHGD 434
+++ + G L ++ + V +++ W S++ A HG+
Sbjct: 349 YAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGN 393
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 36 VLNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKC 95
V + +S+ C L G HA +IK+ ++ + V ++L+ MY KC
Sbjct: 206 VPDQYTFASVFRACSALDRLEHGKRAHAVMIKR--------CIKSNIIVDSALVDMYFKC 257
Query: 96 GELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLT 155
D ++FD++ R+ ++W S+ISG+ + + F++M E R + T
Sbjct: 258 SSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGC---RPNPVTFL 314
Query: 156 TMLSACD 162
+L+AC+
Sbjct: 315 VVLTACN 321
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 228 bits (582), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 158/632 (25%), Positives = 303/632 (47%), Gaps = 79/632 (12%)
Query: 74 FDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPV-RDTVSWNSMISGFLRNRDFDA- 131
FD ++ WN++++ Y K +++A +LF+ RD +++N+++SGF + ++
Sbjct: 46 FDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESE 105
Query: 132 GFRFFKQMSESRTVYSRFDKATLTTML---------------------SACDGPEFSSVS 170
F +M D T+TTM+ + DG +F+ VS
Sbjct: 106 AIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFA-VS 164
Query: 171 RMIHGLVFVGGFEREITV-------------GNALITSYFKCGCFCQGRQVFDEMIERN- 216
+IH G F+ + NA+I +Y + G + VF E N
Sbjct: 165 SLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELND 224
Query: 217 VVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHG 276
++W +I+G AQN E+ L++ M + + ++ + L S +++L G+++H
Sbjct: 225 TISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHA 284
Query: 277 LLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGV----SLTVILVAFAQNG 332
+ K G S+ + S ++D+Y KCG+++ A ESA L G S + ++V ++ G
Sbjct: 285 RVLKNGSYSNKFVSSGIVDVYCKCGNMKYA----ESAHLLYGFGNLYSASSMIVGYSSQG 340
Query: 333 FEEEAIQIFTRIVTLGIEV--------------------------------DANMVSAVL 360
EA ++F + + V D+ ++ +VL
Sbjct: 341 KMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVL 400
Query: 361 GVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSI 420
G + + GK+IH ++ + + ++MYSKCG + + ++F +++++
Sbjct: 401 GACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTV 460
Query: 421 SWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSM 480
+N++IA A HG +++ Q +E+M GG P ++TF++LL AC H GLV +G ++ SM
Sbjct: 461 MYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSM 520
Query: 481 TRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPE-NRGVLVWQALLGACSIHGDSE 539
+ +SP + HY C++D+ G+A L +A +EG+ + + ++ A L ACS + ++E
Sbjct: 521 IEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTE 580
Query: 540 MGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEID 599
+ K ++L++ ++ + ++ +AN Y++ G+W E +M+ K + G SW ID
Sbjct: 581 LVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANID 640
Query: 600 KQVSSFVVGDKLHPQADIIFLELSRLLKHLKD 631
KQ F D H + + I+ L + K L +
Sbjct: 641 KQFHMFTSSDISHYETEAIYAMLHFVTKDLSE 672
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 102/464 (21%), Positives = 193/464 (41%), Gaps = 83/464 (17%)
Query: 177 VFVGGFEREITVGNALITSYFKCGCFCQGRQVFD-EMIERNVVTWTAVISGLAQNELYE- 234
VF ER + NA+I +Y K + R++F+ + ER+++T+ ++SG A+ + E
Sbjct: 45 VFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCES 104
Query: 235 DGLRLFAQM---RGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIES 291
+ + +F +M + + T + + + + + G ++HG+L K G S
Sbjct: 105 EAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVS 164
Query: 292 ALMDLYSKCGSLEGAWQIFESA----------------------------------EELD 317
+L+ +YSKCG + IF + E D
Sbjct: 165 SLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELND 224
Query: 318 GVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHS 377
+S ++ +AQNG+EEEA+++ + G++ D + AVL V SL +GK++H+
Sbjct: 225 TISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHA 284
Query: 378 LIIKKNFSQNPFVSNGLINMYSKCGELH-------------------------------D 406
++K N FVS+G++++Y KCG + +
Sbjct: 285 RVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVE 344
Query: 407 SLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGI-APTDVTFLSLLHACS 465
+ ++F +++KN + W ++ + L+ P + +S+L ACS
Sbjct: 345 AKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACS 404
Query: 466 HAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVW 525
+E G E R L + + VDM + G ++ A+ + E R +++
Sbjct: 405 LQAYMEPGKEIHGHSLRTGILMDK-KLVTAFVDMYSKCGNVEYAERIFDSSFE-RDTVMY 462
Query: 526 QALLGACSIHG----------DSEMGKFAADQLILAAPASSAPH 559
A++ C+ HG D G F D++ A S+ H
Sbjct: 463 NAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRH 506
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 142/338 (42%), Gaps = 44/338 (13%)
Query: 44 SLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQ---- 99
++L+V +L +G +HAR++K + + FV + ++ +Y KCG ++
Sbjct: 265 AVLNVLSSLKSLKIGKEVHARVLKNGSY--------SNKFVSSGIVDVYCKCGNMKYAES 316
Query: 100 ---------------------------DAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAG 132
+A +LFD + ++ V W +M G+L R D+
Sbjct: 317 AHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSV 376
Query: 133 FRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNAL 192
+ + T + D + ++L AC + + IHG G + + A
Sbjct: 377 LELARAFIANET--NTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAF 434
Query: 193 ITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNT 252
+ Y KCG ++FD ER+ V + A+I+G A + + F M G P+
Sbjct: 435 VDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDE 494
Query: 253 LTYLSSLMACSGVQALAEGRK-IHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFE 311
+T+++ L AC + EG K ++ + + + ++DLY K L+ A ++ E
Sbjct: 495 ITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELME 554
Query: 312 SAEEL--DGVSLTVILVAFAQNGFEEEAIQIFTRIVTL 347
+++ D V L L A + N E ++ +++ +
Sbjct: 555 GIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVI 592
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%)
Query: 376 HSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDG 435
H IK + SN L+N+YSK G L ++ VF EM ++N SWN+VIAA+ + +
Sbjct: 11 HIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNV 70
Query: 436 SRALQFYE 443
A + +E
Sbjct: 71 KEARELFE 78
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 138/446 (30%), Positives = 223/446 (50%), Gaps = 35/446 (7%)
Query: 208 VFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQM--RGGSVSPNTLTYLSSLMACSGV 265
VF + +N W +I G +++ E + +F M SV P LTY S A +
Sbjct: 80 VFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRL 139
Query: 266 QALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIF--------------- 310
+GR++HG++ K G++ D I + ++ +Y CG L AW+IF
Sbjct: 140 GQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMI 199
Query: 311 ---------ESAEEL-------DGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDA- 353
+ A+ L +GVS ++ F +NG ++A+ +F + ++ D
Sbjct: 200 MGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGF 259
Query: 354 NMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYE 413
MVS + +G S G+ IH I++ F N V LI+MY KCG + + L VF
Sbjct: 260 TMVSLLNACAYLGAS-EQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFEC 318
Query: 414 MTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKG 473
+K WNS+I A +G RA+ + E+ G+ P V+F+ +L AC+H+G V +
Sbjct: 319 APKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRA 378
Query: 474 MEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACS 533
EF M + + P +HY +V++LG AGLL+EA+ I+ +P ++W +LL AC
Sbjct: 379 DEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACR 438
Query: 534 IHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGV 593
G+ EM K AA L P + +VL++N Y++ G ++E MKE+ + KEVG
Sbjct: 439 KIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGC 498
Query: 594 SWIEIDKQVSSFVVGDKLHPQADIIF 619
S IE+D +V F+ HP++ I+
Sbjct: 499 SSIEVDFEVHEFISCGGTHPKSAEIY 524
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 102/426 (23%), Positives = 195/426 (45%), Gaps = 63/426 (14%)
Query: 97 ELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQM-------SESRTVYSRF 149
++ A +F R+ ++ WN++I GF R+ + F M R Y
Sbjct: 73 DMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSV 132
Query: 150 DKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFC------ 203
KA + A DG R +HG+V G E + + N ++ Y CGC
Sbjct: 133 FKA-YGRLGQARDG-------RQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIF 184
Query: 204 -------------------------QGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLR 238
Q + +FDEM +RN V+W ++ISG +N ++D L
Sbjct: 185 LGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALD 244
Query: 239 LFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYS 298
+F +M+ V P+ T +S L AC+ + A +GR IH + + + + + +AL+D+Y
Sbjct: 245 MFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYC 304
Query: 299 KCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSA 358
KCG +E +FE A + +++ A NGFEE A+ +F+ + G+E D+
Sbjct: 305 KCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDS----- 359
Query: 359 VLGVFGVGTSLPLGKQIHSL-----IIKKNFSQNPFVSNG--LINMYSKCGELHDSLQVF 411
+ GV T+ ++H ++K+ + P + + ++N+ G L ++ +
Sbjct: 360 -VSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALI 418
Query: 412 YEM-TQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVT-FLSLLHACSHAGL 469
M +++++ W+S+++A + G+ A + + ++ + P + ++ L +A + GL
Sbjct: 419 KNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLK--KLDPDETCGYVLLSNAYASYGL 476
Query: 470 VEKGME 475
E+ +E
Sbjct: 477 FEEAVE 482
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 116/245 (47%), Gaps = 30/245 (12%)
Query: 44 SLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALF-------------------- 83
S+ GR G G +H +IK+ DS RN +
Sbjct: 131 SVFKAYGRLGQARDGRQLHGMVIKEG--LEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMI 188
Query: 84 -----VWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQ 138
WNS++ ++KCG + A LFD MP R+ VSWNSMISGF+RN F F++
Sbjct: 189 GFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFRE 248
Query: 139 MSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFK 198
M E + D T+ ++L+AC S R IH + FE V ALI Y K
Sbjct: 249 MQEKDV---KPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCK 305
Query: 199 CGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSS 258
CGC +G VF+ ++ + W ++I GLA N E + LF+++ + P++++++
Sbjct: 306 CGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGV 365
Query: 259 LMACS 263
L AC+
Sbjct: 366 LTACA 370
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 141/547 (25%), Positives = 268/547 (48%), Gaps = 52/547 (9%)
Query: 147 SRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGR 206
SR K +L + G F V R IH ++V G ++ + L+ + K +
Sbjct: 2 SRIGKHPAIALLDS--GITFKEV-RQIHAKLYVDGTLKD----DHLVGHFVKAVALSDHK 54
Query: 207 ------QVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQM--RGGSVSPNTLTYLSS 258
Q+ D + + ++I ++ + E + ++ G + P+ T
Sbjct: 55 YLDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFL 114
Query: 259 LMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYS-------------------- 298
+ AC+G++ G ++HG+ + G +D +++ L+ LY+
Sbjct: 115 VQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDF 174
Query: 299 -----------KCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTL 347
+CG + A ++FE E D ++ ++ +AQ G EA+ +F +
Sbjct: 175 VCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLE 234
Query: 348 GIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDS 407
G++V+ + +VL +L G+ HS I + ++ L+++Y+KCG++ +
Sbjct: 235 GVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKA 294
Query: 408 LQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHA 467
++VF+ M +KN +W+S + A +G G + L+ + M+ G+ P VTF+S+L CS
Sbjct: 295 MEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVV 354
Query: 468 GLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQA 527
G V++G SM + + P+ EHY C+VD+ RAG L++A + I+ +P VW +
Sbjct: 355 GFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSS 414
Query: 528 LLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGV 587
LL A ++ + E+G A+ +++ A+ +VL++NIY+ W + + MK KGV
Sbjct: 415 LLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGV 474
Query: 588 AKEVGVSWIEIDKQVSSFVVGDKLHP---QADIIFLELSRLLKHLKDEGYVPDKRCILYY 644
K+ G S +E++ +V F VGDK HP Q D ++ ++SR L+ GY D +++
Sbjct: 475 RKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISR---RLRLAGYKADTTPVMFD 531
Query: 645 LDQDKKD 651
+D+++K+
Sbjct: 532 IDEEEKE 538
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 116/226 (51%), Gaps = 4/226 (1%)
Query: 87 SLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVY 146
++++ ++CG++ A KLF+ MP RD ++WN+MISG+ + + F M
Sbjct: 179 AMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGV-- 236
Query: 147 SRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGR 206
+ + + ++LSAC R H + + + + L+ Y KCG +
Sbjct: 237 -KVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAM 295
Query: 207 QVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQ 266
+VF M E+NV TW++ ++GLA N E L LF+ M+ V+PN +T++S L CS V
Sbjct: 296 EVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVG 355
Query: 267 ALAEG-RKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFE 311
+ EG R + + G++ L L+DLY++ G LE A I +
Sbjct: 356 FVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQ 401
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 224 bits (571), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 147/561 (26%), Positives = 258/561 (45%), Gaps = 76/561 (13%)
Query: 82 LFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSE 141
+FV+N+L + C +++L+ RM +RD+VS +S + + +
Sbjct: 836 VFVYNALFKGFVTCSHPIRSLELYVRM-LRDSVSPSSYT---------------YSSLVK 879
Query: 142 SRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGC 201
+ + SRF ++ + ++ GF + + LI Y G
Sbjct: 880 ASSFASRFGES--------------------LQAHIWKFGFGFHVKIQTTLIDFYSATGR 919
Query: 202 FCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMA 261
+ R+VFDEM ER+ + WT ++S R M + N ++
Sbjct: 920 IREARKVFDEMPERDDIAWTTMVSAY----------RRVLDMDSANSLANQMS------- 962
Query: 262 CSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSL 321
+ + + L++ Y G+LE A +F D +S
Sbjct: 963 ----------------------EKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISW 1000
Query: 322 TVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIK 381
T ++ ++QN EAI +F +++ GI D +S V+ L +GK++H ++
Sbjct: 1001 TTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQ 1060
Query: 382 KNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQF 441
F + ++ + L++MYSKCG L +L VF+ + +KN WNS+I A HG AL+
Sbjct: 1061 NGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKM 1120
Query: 442 YEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLG 501
+ +M + + P VTF+S+ AC+HAGLV++G SM D+ + EHY +V +
Sbjct: 1121 FAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFS 1180
Query: 502 RAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVL 561
+AGL+ EA I + ++W ALL C IH + + + A ++L++ P +S + L
Sbjct: 1181 KAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFL 1240
Query: 562 MANIYSAEGKWKERAGAIKRMKEKGVAKEV-GVSWIEIDKQVSSFVVGDKLHPQADIIFL 620
+ ++Y+ + +W++ A RM+E G+ K G S I IDK+ F DK H +D + L
Sbjct: 1241 LVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCL 1300
Query: 621 ELSRLLKHLKDEGYVPDKRCI 641
L + + GYV + +
Sbjct: 1301 LLDEIYDQMGLAGYVQETENV 1321
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 132/273 (48%), Gaps = 35/273 (12%)
Query: 74 FDSSRRNALFVWNSLLSMY-----------------------SKC--------GELQDAI 102
FD W +++S Y S C G L+ A
Sbjct: 927 FDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAE 986
Query: 103 KLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACD 162
LF++MPV+D +SW +MI G+ +N+ + F +M E + D+ T++T++SAC
Sbjct: 987 SLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIP---DEVTMSTVISACA 1043
Query: 163 GPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTA 222
+ + +H GF ++ +G+AL+ Y KCG + VF + ++N+ W +
Sbjct: 1044 HLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNS 1103
Query: 223 VISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIH-GLLWKL 281
+I GLA + ++ L++FA+M SV PN +T++S AC+ + EGR+I+ ++
Sbjct: 1104 IIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDY 1163
Query: 282 GMQSDLCIESALMDLYSKCGSLEGAWQIFESAE 314
+ S++ ++ L+SK G + A ++ + E
Sbjct: 1164 SIVSNVEHYGGMVHLFSKAGLIYEALELIGNME 1196
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 163/389 (41%), Gaps = 56/389 (14%)
Query: 153 TLTTMLSACDGPEF--SSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQ---GRQ 207
L ++ C P+ S+++ MI ++ + N IT+ C F +
Sbjct: 775 NLKKIIKQCSTPKLLESALAAMIKT-----SLNQDCRLMNQFITA---CTSFKRLDLAVS 826
Query: 208 VFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQA 267
+M E NV + A+ G L L+ +M SVSP++ TY S + A S
Sbjct: 827 TMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASR 886
Query: 268 LAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVA 327
E + H +WK G + I++ L+D YS G + A ++F+ E D ++ T
Sbjct: 887 FGESLQAH--IWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTT---- 940
Query: 328 FAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQN 387
MVSA V + ++ L Q+ +N
Sbjct: 941 ---------------------------MVSAYRRVLDMDSANSLANQMS--------EKN 965
Query: 388 PFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRV 447
SN LIN Y G L + +F +M K+ ISW ++I ++++ A+ + +M
Sbjct: 966 EATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMME 1025
Query: 448 GGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLK 507
GI P +VT +++ AC+H G++E G E + T + + +VDM + G L+
Sbjct: 1026 EGIIPDEVTMSTVISACAHLGVLEIGKEVHM-YTLQNGFVLDVYIGSALVDMYSKCGSLE 1084
Query: 508 EAKNFIEGLPENRGVLVWQALLGACSIHG 536
A LP+ + + W +++ + HG
Sbjct: 1085 RALLVFFNLPK-KNLFCWNSIIEGLAAHG 1112
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 84/191 (43%), Gaps = 21/191 (10%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDA 101
+S+++S C G L +G +H ++ F D +++ ++L+ MYSKCG L+ A
Sbjct: 1035 MSTVISACAHLGVLEIGKEVHMYTLQNG--FVLD------VYIGSALVDMYSKCGSLERA 1086
Query: 102 IKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSAC 161
+ +F +P ++ WNS+I G + + F +M E +V + + T ++ +AC
Sbjct: 1087 LLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKM-EMESV--KPNAVTFVSVFTAC 1143
Query: 162 DGPEFSSVSR-----MIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEM-IER 215
R MI V E ++ + K G + ++ M E
Sbjct: 1144 THAGLVDEGRRIYRSMIDDYSIVSNVEHY----GGMVHLFSKAGLIYEALELIGNMEFEP 1199
Query: 216 NVVTWTAVISG 226
N V W A++ G
Sbjct: 1200 NAVIWGALLDG 1210
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 121/340 (35%), Positives = 181/340 (53%), Gaps = 4/340 (1%)
Query: 291 SALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVT-LGI 349
+A++ Y++ G + A +FE E D S IL A QNG EA+ +F R++ I
Sbjct: 197 TAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSI 256
Query: 350 EVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQ 409
+ V VL +L L K IH+ +++ S + FVSN L+++Y KCG L ++
Sbjct: 257 RPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASS 316
Query: 410 VFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEM---RVGGIAPTDVTFLSLLHACSH 466
VF ++K+ +WNS+I FA HG A+ +EEM + I P +TF+ LL+AC+H
Sbjct: 317 VFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTH 376
Query: 467 AGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQ 526
GLV KG + MT + PR EHY C++D+LGRAG EA + + +W
Sbjct: 377 GGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWG 436
Query: 527 ALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKG 586
+LL AC IHG ++ + A L+ P + +MAN+Y G W+E A K +K +
Sbjct: 437 SLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQN 496
Query: 587 VAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLL 626
K G S IEID +V F DK HP+ + I++ L L+
Sbjct: 497 AYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSLI 536
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 192/421 (45%), Gaps = 49/421 (11%)
Query: 57 LGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYS-KCGELQDAIKLFDRMPVRDTVS 115
+ S H +KQ F S ++ F+ LL + + L A +FDR +T
Sbjct: 31 ISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNTHL 90
Query: 116 WNSMISGFLRNRDFDA--GFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSV--SR 171
+ ++++ + + A F FF+ M +R+V R + +L + P SS +
Sbjct: 91 YAAVLTAYSSSLPLHASSAFSFFRLMV-NRSV-PRPNHFIYPLVLKST--PYLSSAFSTP 146
Query: 172 MIHGLVFVGGFEREITVGNALITSYFK-CGCFCQGRQVFDEMIERNVVTWTAVISGLA-- 228
++H +F GF + V AL+ SY RQ+FDEM ERNVV+WTA++SG A
Sbjct: 147 LVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARS 206
Query: 229 -----------------------------QNELYEDGLRLFAQM-RGGSVSPNTLTYLSS 258
QN L+ + + LF +M S+ PN +T +
Sbjct: 207 GDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCV 266
Query: 259 LMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDG 318
L AC+ L + IH ++ + SD+ + ++L+DLY KCG+LE A +F+ A +
Sbjct: 267 LSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSL 326
Query: 319 VSLTVILVAFAQNGFEEEAIQIFTRIVTLGI-EVDANMVS--AVLGVFGVGTSLPLGKQI 375
+ ++ FA +G EEAI +F ++ L I ++ + ++ +L G + G+
Sbjct: 327 TAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGY 386
Query: 376 HSLIIKKNFSQNPFVSN--GLINMYSKCGELHDSLQVFYEMTQK-NSISWNSVIAAFARH 432
L+ + F P + + LI++ + G ++L+V M K + W S++ A H
Sbjct: 387 FDLMTNR-FGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIH 445
Query: 433 G 433
G
Sbjct: 446 G 446
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 42/207 (20%)
Query: 368 SLPLGKQIHSLIIKKNFSQNPFVSNGLINMY-SKCGELHDSLQVFYEMTQKNSISWNSVI 426
S PL +H+ + K F V L++ Y S + + Q+F EM+++N +SW +++
Sbjct: 144 STPL---VHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAML 200
Query: 427 AAFARHGDGSRALQFYEEM--------------------------------RVGGIAPTD 454
+ +AR GD S A+ +E+M I P +
Sbjct: 201 SGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNE 260
Query: 455 VTFLSLLHACSHAGLVE--KGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNF 512
VT + +L AC+ G ++ KG+ + RD LS +VD+ G+ G L+EA +
Sbjct: 261 VTVVCVLSACAQTGTLQLAKGIHAF-AYRRD--LSSDVFVSNSLVDLYGKCGNLEEASSV 317
Query: 513 IEGLPENRGVLVWQALLGACSIHGDSE 539
+ + + + W +++ ++HG SE
Sbjct: 318 FK-MASKKSLTAWNSMINCFALHGRSE 343
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 38 NHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGE 97
N + +LS C + G L L IHA F++ + +FV NSL+ +Y KCG
Sbjct: 259 NEVTVVCVLSACAQTGTLQLAKGIHA--------FAYRRDLSSDVFVSNSLVDLYGKCGN 310
Query: 98 LQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTM 157
L++A +F + +WNSMI+ F + + F++M + + D T +
Sbjct: 311 LEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGL 370
Query: 158 LSAC 161
L+AC
Sbjct: 371 LNAC 374
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 157/559 (28%), Positives = 276/559 (49%), Gaps = 23/559 (4%)
Query: 44 SLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQD-AI 102
S+LSVC + G +H R+I F + +FV ++L+ +Y+ C L D A+
Sbjct: 117 SVLSVCSDELFCREGIQVHCRVIS----LGFGCN----MFVRSALVGLYA-CLRLVDVAL 167
Query: 103 KLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACD 162
KLFD M R+ N ++ F + + F + +M + T M+ C
Sbjct: 168 KLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAK---NGLTYCYMIRGCS 224
Query: 163 GPEFSSVSRMIHGLVFVGGFE-REITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWT 221
+ +H LV G+ I V N L+ Y CG + F+ + E++V++W
Sbjct: 225 HDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWN 284
Query: 222 AVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKL 281
+++S A D L LF++M+ P+ ++S L CS + G++IH + K+
Sbjct: 285 SIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKM 344
Query: 282 GMQ-SDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQI 340
G S L ++SAL+D+Y KC +E + +++S L+ ++ + G ++ I++
Sbjct: 345 GFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEM 404
Query: 341 FTRIVTLGIEVDANMVSAVLGVFGVG--TSLPLGKQIHSLIIKKNFSQNPFVSNGLINMY 398
F ++ G +D +S VL + SL +H IK ++ + VS LI+ Y
Sbjct: 405 FGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAY 464
Query: 399 SKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFL 458
+K G+ S +VF E+ N S+I +AR+G G+ ++ EM + P +VT L
Sbjct: 465 TKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTIL 524
Query: 459 SLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPE 518
S+L CSH+GLVE+G S+ + +SP + YAC+VD+LGRAGL+++A+ +
Sbjct: 525 SVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARG 584
Query: 519 NRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKW------ 572
+ + W +LL +C IH + +G+ AA+ L+ P + A ++ ++ Y G +
Sbjct: 585 DADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQI 644
Query: 573 KERAGAIKRMKEKGVAKEV 591
+E A + + M+E G + V
Sbjct: 645 REIAASRELMREIGYSSVV 663
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 181/398 (45%), Gaps = 6/398 (1%)
Query: 71 FFSF-DSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDF 129
F SF + + + ++ N + K G L A + FD M VRD V++N +ISG N +
Sbjct: 34 FSSFLEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISG---NSRY 90
Query: 130 DAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVG 189
R + +E + R +T ++LS C F +H V GF + V
Sbjct: 91 GCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVR 150
Query: 190 NALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVS 249
+AL+ Y ++FDEM++RN+ ++ Q + ++ +M V+
Sbjct: 151 SALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVA 210
Query: 250 PNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQ-SDLCIESALMDLYSKCGSLEGAWQ 308
N LTY + CS + + EG+++H L+ K G S++ + + L+D YS CG L G+ +
Sbjct: 211 KNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMR 270
Query: 309 IFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTS 368
F + E D +S I+ A G +++ +F+++ G + L +
Sbjct: 271 SFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSD 330
Query: 369 LPLGKQIHSLIIKKNFSQNPF-VSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIA 427
+ GKQIH ++K F + V + LI+MY KC + +S ++ + N NS++
Sbjct: 331 IQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMT 390
Query: 428 AFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACS 465
+ G ++ + M G +VT ++L A S
Sbjct: 391 SLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALS 428
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 167/335 (49%), Gaps = 13/335 (3%)
Query: 190 NALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVS 249
N I K G + FDEM R+VVT+ +ISG ++ + L+A+M +
Sbjct: 50 NRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLR 109
Query: 250 PNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQI 309
+ T+ S L CS EG ++H + LG ++ + SAL+ LY+ ++ A ++
Sbjct: 110 ESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKL 169
Query: 310 FESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSL 369
F+ + + ++L F Q G + +++ R+ G V N ++ + G
Sbjct: 170 FDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEG--VAKNGLTYCYMIRGCSHDR 227
Query: 370 PL--GKQIHSLIIKKNFS-QNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVI 426
+ GKQ+HSL++K ++ N FV+N L++ YS CG+L S++ F + +K+ ISWNS++
Sbjct: 228 LVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIV 287
Query: 427 AAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGME---FLVSMTRD 483
+ A +G +L + +M+ G P+ F+S L+ CS ++ G + +++ M D
Sbjct: 288 SVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFD 347
Query: 484 HRLSPRSEHY-ACVVDMLGRAGLLKEAKNFIEGLP 517
S H + ++DM G+ ++ + + LP
Sbjct: 348 ----VSSLHVQSALIDMYGKCNGIENSALLYQSLP 378
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 221 bits (564), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 127/372 (34%), Positives = 202/372 (54%), Gaps = 19/372 (5%)
Query: 284 QSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTR 343
+ D+ + +A++ Y + G ++ A ++F+S + S T ++ F+QNG EA+++F
Sbjct: 145 KRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMF-- 202
Query: 344 IVTLGIEVDANM------VSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINM 397
L +E D ++ V +VL L +G+++ + F N +V N I M
Sbjct: 203 ---LCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEM 259
Query: 398 YSKCGELHDSLQVFYEM-TQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVT 456
YSKCG + + ++F E+ Q+N SWNS+I + A HG AL + +M G P VT
Sbjct: 260 YSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVT 319
Query: 457 FLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGL 516
F+ LL AC H G+V KG E SM H++SP+ EHY C++D+LGR G L+EA + I+ +
Sbjct: 320 FVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTM 379
Query: 517 PENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERA 576
P +VW LLGACS HG+ E+ + A++ L P + V+M+NIY+A KW
Sbjct: 380 PMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVL 439
Query: 577 GAIKRMKEKGVAKEVGVSW-IEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLK----- 630
K MK++ + K G S+ +E+ V F V DK HP++ I+ L + + +K
Sbjct: 440 RMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLEEIFRRMKLEKSR 499
Query: 631 -DEGYVPDKRCI 641
D P++ CI
Sbjct: 500 FDSLLQPEQLCI 511
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 132/241 (54%), Gaps = 4/241 (1%)
Query: 74 FDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGF 133
FD + + VWN++++ Y + G+++ A++LFD MP ++ SW ++ISGF +N ++
Sbjct: 140 FDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEAL 199
Query: 134 RFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALI 193
+ F M + ++V + + T+ ++L AC + R + G GF I V NA I
Sbjct: 200 KMFLCMEKDKSV--KPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATI 257
Query: 194 TSYFKCGCFCQGRQVFDEM-IERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNT 252
Y KCG +++F+E+ +RN+ +W ++I LA + +++ L LFAQM P+
Sbjct: 258 EMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDA 317
Query: 253 LTYLSSLMACSGVQALAEGRKIHGLLWKL-GMQSDLCIESALMDLYSKCGSLEGAWQIFE 311
+T++ L+AC + +G+++ + ++ + L ++DL + G L+ A+ + +
Sbjct: 318 VTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIK 377
Query: 312 S 312
+
Sbjct: 378 T 378
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 143/299 (47%), Gaps = 35/299 (11%)
Query: 171 RMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIER--------------- 215
R++H F GFE + LIT+Y K G C R+VFDEM +R
Sbjct: 102 RLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRR 161
Query: 216 ----------------NVVTWTAVISGLAQNELYEDGLRLFAQM-RGGSVSPNTLTYLSS 258
NV +WT VISG +QN Y + L++F M + SV PN +T +S
Sbjct: 162 GDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSV 221
Query: 259 LMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFES-AEELD 317
L AC+ + L GR++ G + G ++ + +A +++YSKCG ++ A ++FE + +
Sbjct: 222 LPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRN 281
Query: 318 GVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDA-NMVSAVLGVFGVGTSLPLGKQIH 376
S ++ + A +G +EA+ +F +++ G + DA V +L G + +
Sbjct: 282 LCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFK 341
Query: 377 SLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQK-NSISWNSVIAAFARHGD 434
S+ S +I++ + G+L ++ + M K +++ W +++ A + HG+
Sbjct: 342 SMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGN 400
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 91/211 (43%), Gaps = 40/211 (18%)
Query: 370 PLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAF 429
PL + +HS + F + F LI Y+K G L + +VF EM++++ WN++I +
Sbjct: 100 PL-RLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGY 158
Query: 430 ARHGDGSRALQFYEEM--------------------------------RVGGIAPTDVTF 457
R GD A++ ++ M + + P +T
Sbjct: 159 QRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITV 218
Query: 458 LSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYAC--VVDMLGRAGLLKEAKNFIEG 515
+S+L AC++ G +E G L R++ Y C ++M + G++ AK E
Sbjct: 219 VSVLPACANLGELEIGRR-LEGYARENGFFDNI--YVCNATIEMYSKCGMIDVAKRLFEE 275
Query: 516 LPENRGVLVWQALLGACSIHG--DSEMGKFA 544
L R + W +++G+ + HG D + FA
Sbjct: 276 LGNQRNLCSWNSMIGSLATHGKHDEALTLFA 306
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 139/474 (29%), Positives = 249/474 (52%), Gaps = 7/474 (1%)
Query: 57 LGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSW 116
L SS R+IK+ + ++ N+L+S + G+L A K+FD MP ++TV+W
Sbjct: 92 LQSSNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTW 151
Query: 117 NSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHG- 175
+MI G+L+ D F F+ + ++ ++ +L+ C + R +HG
Sbjct: 152 TAMIDGYLKYGLEDEAFALFEDYVKHGIRFT--NERMFVCLLNLCSRRAEFELGRQVHGN 209
Query: 176 LVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYED 235
+V VG + V ++L+ Y +CG + FD M E++V++WTAVIS ++
Sbjct: 210 MVKVG--VGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIK 267
Query: 236 GLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMD 295
+ +F M PN T S L ACS +AL GR++H L+ K +++D+ + ++LMD
Sbjct: 268 AIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMD 327
Query: 296 LYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANM 355
+Y+KCG + ++F+ + V+ T I+ A A+ GF EEAI +F + + +
Sbjct: 328 MYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLT 387
Query: 356 VSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMT 415
V ++L G +L LGK++H+ IIK + +N ++ + L+ +Y KCGE D+ V ++
Sbjct: 388 VVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLP 447
Query: 416 QKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGME 475
++ +SW ++I+ + G S AL F +EM G+ P T+ S L AC+++ + G
Sbjct: 448 SRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRS 507
Query: 476 FLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALL 529
++H LS A ++ M + G + EA + +PE + ++ W+A++
Sbjct: 508 IHSIAKKNHALSNVFVGSA-LIHMYAKCGFVSEAFRVFDSMPE-KNLVSWKAMI 559
Score = 219 bits (559), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 135/434 (31%), Positives = 213/434 (49%), Gaps = 12/434 (2%)
Query: 38 NHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGE 97
N LL++C R LG +H ++K L V +SL+ Y++CGE
Sbjct: 183 NERMFVCLLNLCSRRAEFELGRQVHGNMVKVGV---------GNLIVESSLVYFYAQCGE 233
Query: 98 LQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTM 157
L A++ FD M +D +SW ++IS R F M + + F T+ ++
Sbjct: 234 LTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEF---TVCSI 290
Query: 158 LSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNV 217
L AC + R +H LV + ++ VG +L+ Y KCG R+VFD M RN
Sbjct: 291 LKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNT 350
Query: 218 VTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGL 277
VTWT++I+ A+ E+ + LF M+ + N LT +S L AC V AL G+++H
Sbjct: 351 VTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQ 410
Query: 278 LWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEA 337
+ K ++ ++ I S L+ LY KCG A+ + + D VS T ++ + G E EA
Sbjct: 411 IIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEA 470
Query: 338 IQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINM 397
+ ++ G+E + S+ L SL +G+ IHS+ K + N FV + LI+M
Sbjct: 471 LDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHM 530
Query: 398 YSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTF 457
Y+KCG + ++ +VF M +KN +SW ++I +AR+G AL+ M G D F
Sbjct: 531 YAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIF 590
Query: 458 LSLLHACSHAGLVE 471
++L C L E
Sbjct: 591 ATILSTCGDIELDE 604
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 130/426 (30%), Positives = 220/426 (51%), Gaps = 18/426 (4%)
Query: 119 MISGFLRNRDFDAGFRFFK-----QMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMI 173
++SG + FD+GF FK Q S R D A L L + +G + + I
Sbjct: 50 LVSG--KRASFDSGFSGFKGENVNQDDSSSFDSERVDYALLAEWLQSSNGMR---LIKRI 104
Query: 174 HGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELY 233
H + ++ I GN LI+S + G R+VFD M E+N VTWTA+I G + L
Sbjct: 105 HAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLE 164
Query: 234 EDGLRLFAQ-MRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESA 292
++ LF ++ G N ++ L CS GR++HG + K+G+ +L +ES+
Sbjct: 165 DEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGV-GNLIVESS 223
Query: 293 LMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVD 352
L+ Y++CG L A + F+ EE D +S T ++ A ++ G +AI +F ++ +
Sbjct: 224 LVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPN 283
Query: 353 ANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFY 412
V ++L +L G+Q+HSL++K+ + FV L++MY+KCGE+ D +VF
Sbjct: 284 EFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFD 343
Query: 413 EMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEK 472
M+ +N+++W S+IAA AR G G A+ + M+ + ++T +S+L AC G +
Sbjct: 344 GMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLL 403
Query: 473 GMEFLVSMTRDHRLSPRSEHY--ACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLG 530
G E + ++ S Y + +V + + G ++A N ++ LP +R V+ W A++
Sbjct: 404 GKELHAQIIKN---SIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLP-SRDVVSWTAMIS 459
Query: 531 ACSIHG 536
CS G
Sbjct: 460 GCSSLG 465
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 127/266 (47%), Gaps = 18/266 (6%)
Query: 8 NTHLPSWVDSLKSKA-------PISQYPFPATSESVLNHAHLSSLLSVCGRDGNLHLGSS 60
N + +W + + A IS + + N+ + S+L CG G L LG
Sbjct: 347 NRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKE 406
Query: 61 IHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMI 120
+HA+IIK +S +N +++ ++L+ +Y KCGE +DA + ++P RD VSW +MI
Sbjct: 407 LHAQIIK-------NSIEKN-VYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMI 458
Query: 121 SGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVG 180
SG F K+M + + F T ++ L AC E + R IH +
Sbjct: 459 SGCSSLGHESEALDFLKEMIQEGVEPNPF---TYSSALKACANSESLLIGRSIHSIAKKN 515
Query: 181 GFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLF 240
+ VG+ALI Y KCG + +VFD M E+N+V+W A+I G A+N + L+L
Sbjct: 516 HALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLM 575
Query: 241 AQMRGGSVSPNTLTYLSSLMACSGVQ 266
+M + + + L C ++
Sbjct: 576 YRMEAEGFEVDDYIFATILSTCGDIE 601
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 220 bits (560), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 193/373 (51%), Gaps = 4/373 (1%)
Query: 220 WTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLW 279
W ++ ++E D ++++ M +V P+ + + A + G+++H +
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 280 KLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQ 339
+LG D ES + LY K G E A ++F+ E S I+ G EA++
Sbjct: 145 RLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVE 204
Query: 340 IFTRIVTLGIEVDA-NMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNP--FVSNGLIN 396
+F + G+E D MVS G+G L L Q+H +++ + + N LI+
Sbjct: 205 MFVDMKRSGLEPDDFTMVSVTASCGGLG-DLSLAFQLHKCVLQAKTEEKSDIMMLNSLID 263
Query: 397 MYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVT 456
MY KCG + + +F EM Q+N +SW+S+I +A +G+ AL+ + +MR G+ P +T
Sbjct: 264 MYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKIT 323
Query: 457 FLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGL 516
F+ +L AC H GLVE+G + M + L P HY C+VD+L R G LKEAK +E +
Sbjct: 324 FVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEM 383
Query: 517 PENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERA 576
P V+VW L+G C GD EM ++ A ++ P + +V++AN+Y+ G WK+
Sbjct: 384 PMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVE 443
Query: 577 GAIKRMKEKGVAK 589
K MK K VAK
Sbjct: 444 RVRKLMKTKKVAK 456
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 164/337 (48%), Gaps = 11/337 (3%)
Query: 103 KLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACD 162
++ D+ P+ WN+++ ++R+ + + M S + R+ +L ++ A
Sbjct: 74 RILDQYPI--AFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRY---SLPIVIKAAV 128
Query: 163 GPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTA 222
++ + +H + GF + + IT Y K G F R+VFDE ER + +W A
Sbjct: 129 QIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNA 188
Query: 223 VISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHG--LLWK 280
+I GL + + +F M+ + P+ T +S +C G+ L+ ++H L K
Sbjct: 189 IIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAK 248
Query: 281 LGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQI 340
+SD+ + ++L+D+Y KCG ++ A IFE + + VS + ++V +A NG EA++
Sbjct: 249 TEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALEC 308
Query: 341 FTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSN--GLINMY 398
F ++ G+ + VL G + GK ++ +K F P +S+ ++++
Sbjct: 309 FRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAM-MKSEFELEPGLSHYGCIVDLL 367
Query: 399 SKCGELHDSLQVFYEMTQK-NSISWNSVIAAFARHGD 434
S+ G+L ++ +V EM K N + W ++ + GD
Sbjct: 368 SRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGD 404
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 114/232 (49%), Gaps = 6/232 (2%)
Query: 83 FVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSES 142
F + +++Y K GE ++A K+FD P R SWN++I G + F M S
Sbjct: 153 FCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRS 212
Query: 143 RTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFER--EITVGNALITSYFKCG 200
D T+ ++ ++C G S++ +H V E +I + N+LI Y KCG
Sbjct: 213 GL---EPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCG 269
Query: 201 CFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLM 260
+F+EM +RNVV+W+++I G A N + L F QMR V PN +T++ L
Sbjct: 270 RMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLS 329
Query: 261 ACSGVQALAEGRKIHGLLW-KLGMQSDLCIESALMDLYSKCGSLEGAWQIFE 311
AC + EG+ ++ + ++ L ++DL S+ G L+ A ++ E
Sbjct: 330 ACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVE 381
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 43/203 (21%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDA 101
+ S+ + CG G+L L +H +++ + ++ + + NSL+ MY KCG + A
Sbjct: 221 MVSVTASCGGLGDLSLAFQLHKCVLQA------KTEEKSDIMMLNSLIDMYGKCGRMDLA 274
Query: 102 IKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSAC 161
+F+ M R+ VSW+SMI G+ N + F+QM E R +K T +LSAC
Sbjct: 275 SHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGV---RPNKITFVGVLSAC 331
Query: 162 DGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKC-------GCFC----------Q 204
+H GG E A++ S F+ GC +
Sbjct: 332 -----------VH-----GGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKE 375
Query: 205 GRQVFDEM-IERNVVTWTAVISG 226
++V +EM ++ NV+ W ++ G
Sbjct: 376 AKKVVEEMPMKPNVMVWGCLMGG 398
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 219 bits (558), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 138/543 (25%), Positives = 256/543 (47%), Gaps = 37/543 (6%)
Query: 81 ALFVWNSLLSMYSKCGELQDAIKLFDRMPV----RDTVSWNSMISGFLRNRDFDAGFRFF 136
L WN L+ Y++ G+ A+ L +M D +W +MISG + N F
Sbjct: 281 GLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMF 340
Query: 137 KQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSY 196
++M + V + T+ + +SAC + + +H + GF ++ VGN+L+ Y
Sbjct: 341 RKMFLAGVVP---NAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMY 397
Query: 197 FKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYL 256
KCG R+VFD + ++V TW ++I+G Q LF +M+ ++ PN +T+
Sbjct: 398 SKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITW- 456
Query: 257 SSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEEL 316
+ M ++ EG MDL+ + +E ++ +
Sbjct: 457 -NTMISGYIKNGDEGEA--------------------MDLFQR---MEKDGKV-----QR 487
Query: 317 DGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIH 376
+ + +I+ + QNG ++EA+++F ++ ++ + ++L + ++IH
Sbjct: 488 NTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIH 547
Query: 377 SLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGS 436
++++N V N L + Y+K G++ S +F M K+ I+WNS+I + HG
Sbjct: 548 GCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYG 607
Query: 437 RALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACV 496
AL + +M+ GI P T S++ A G V++G + S+ D+ + P EH + +
Sbjct: 608 PALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAM 667
Query: 497 VDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASS 556
V + GRA L+EA FI+ + +W++ L C IHGD +M AA+ L P ++
Sbjct: 668 VYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENT 727
Query: 557 APHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQAD 616
A +++ IY+ K K ++ + K +G SWIE+ + +F GD+ D
Sbjct: 728 ATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQSKLCTD 787
Query: 617 IIF 619
+++
Sbjct: 788 VLY 790
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/501 (23%), Positives = 218/501 (43%), Gaps = 64/501 (12%)
Query: 45 LLSVCGRDGNLHLGSSIHAR--IIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAI 102
LL C G++HLG +HAR + +P +FV LLSMY+KCG + DA
Sbjct: 87 LLESCIDSGSIHLGRILHARFGLFTEPD-----------VFVETKLLSMYAKCGCIADAR 135
Query: 103 KLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACD 162
K+FD M R+ +W++MI + R + + F+ M + + F +L C
Sbjct: 136 KVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDF---LFPKILQGCA 192
Query: 163 GPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTA 222
++IH +V G + V N+++ Y KCG + F M ER+V+ W +
Sbjct: 193 NCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNS 252
Query: 223 VISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLG 282
V+ QN +E+ + L +M +SP +T+
Sbjct: 253 VLLAYCQNGKHEEAVELVKEMEKEGISPGLVTW--------------------------- 285
Query: 283 MQSDLCIESALMDLYSKCGSLEGAWQIFESAEEL----DGVSLTVILVAFAQNGFEEEAI 338
+ L+ Y++ G + A + + E D + T ++ NG +A+
Sbjct: 286 --------NILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQAL 337
Query: 339 QIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMY 398
+F ++ G+ +A + + + + G ++HS+ +K F + V N L++MY
Sbjct: 338 DMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMY 397
Query: 399 SKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFL 458
SKCG+L D+ +VF + K+ +WNS+I + + G +A + + M+ + P +T+
Sbjct: 398 SKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWN 457
Query: 459 SLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEA------KNF 512
+++ G + M+ M +D ++ + + ++ + G EA F
Sbjct: 458 TMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQF 517
Query: 513 IEGLPENRGVLVWQALLGACS 533
+P + +L +LL AC+
Sbjct: 518 SRFMPNSVTIL---SLLPACA 535
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/463 (24%), Positives = 205/463 (44%), Gaps = 61/463 (13%)
Query: 147 SRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGF-EREITVGNALITSYFKCGCFCQG 205
S+ ++T +L +C + R++H G F E ++ V L++ Y KCGC
Sbjct: 77 SKVKRSTYLKLLESCIDSGSIHLGRILHARF--GLFTEPDVFVETKLLSMYAKCGCIADA 134
Query: 206 RQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGV 265
R+VFD M ERN+ TW+A+I ++ + + +LF M V P+ + L C+
Sbjct: 135 RKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANC 194
Query: 266 QALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVIL 325
+ G+ IH ++ KLGM S L + ++++ +Y+KCG L+ A + F E D ++ +L
Sbjct: 195 GDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVL 254
Query: 326 VAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFS 385
+A+ QNG EEA+++ + GI S
Sbjct: 255 LAYCQNGKHEEAVELVKEMEKEGI-----------------------------------S 279
Query: 386 QNPFVSNGLINMYSKCGELHDSLQVFYEM----TQKNSISWNSVIAAFARHGDGSRALQF 441
N LI Y++ G+ ++ + +M + +W ++I+ +G +AL
Sbjct: 280 PGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDM 339
Query: 442 YEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTR----DHRLSPRSEHYACVV 497
+ +M + G+ P VT +S + ACS ++ +G E + D L S +V
Sbjct: 340 FRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNS-----LV 394
Query: 498 DMLGRAGLLKEAKNFIEGLPENRGVLVWQALL-GACSIHGDSEMGKFAADQLILAAPASS 556
DM + G L++A+ + + +N+ V W +++ G C GK A + A+
Sbjct: 395 DMYSKCGKLEDARKVFDSV-KNKDVYTWNSMITGYCQA---GYCGK-AYELFTRMQDANL 449
Query: 557 APHVLMANI----YSAEGKWKERAGAIKRMKEKGVAKEVGVSW 595
P+++ N Y G E +RM++ G + +W
Sbjct: 450 RPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATW 492
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 218 bits (555), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 121/373 (32%), Positives = 211/373 (56%), Gaps = 16/373 (4%)
Query: 249 SPNTLTYLSSLMA--CSGVQALA--EGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLE 304
SP+ + S L A S Q + +GR+IH L+ KLG + + I+++L+ YS G ++
Sbjct: 58 SPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVD 117
Query: 305 GAWQIFESAEELDGVSL-TVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVF 363
A Q+F+ E + L T ++ A+ +N EAI++F R+ IE+D +V+ L
Sbjct: 118 YARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSAC 177
Query: 364 GVGTSLPLGKQIHSLIIKKN--FSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSIS 421
++ +G++I+S IK+ + + + N L+NMY K GE + ++F E +K+ +
Sbjct: 178 ADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTT 237
Query: 422 WNSVIAAFARHGDGSRALQFYEEMRV------GGIAPTDVTFLSLLHACSHAGLVEKGME 475
+ S+I +A +G +L+ +++M+ I P DVTF+ +L ACSH+GLVE+G
Sbjct: 238 YTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKR 297
Query: 476 FLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIH 535
SM D+ L PR H+ C+VD+ R+G LK+A FI +P ++W+ LLGACS+H
Sbjct: 298 HFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLH 357
Query: 536 GDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSW 595
G+ E+G+ ++ +V ++NIY+++G W E++ R++++ + G SW
Sbjct: 358 GNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDRVRKRRMP---GKSW 414
Query: 596 IEIDKQVSSFVVG 608
IE+ ++ FV G
Sbjct: 415 IELGSIINEFVSG 427
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 136/299 (45%), Gaps = 38/299 (12%)
Query: 26 QYPFPATSESVLNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALF-V 84
Q P S SVL +SS DG IHA ++++ F NA+ +
Sbjct: 57 QSPSFVDSFSVLFAIKVSSAQKASSLDGR-----QIHA-LVRKLGF--------NAVIQI 102
Query: 85 WNSLLSMYSKCGELQDAIKLFDRMPVR-DTVSWNSMISGFLRNRDFDAGFRFFKQMSESR 143
SL+ YS G++ A ++FD P + + V W +MIS + N + FK+M +
Sbjct: 103 QTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEK 162
Query: 144 TVYSRFDKATLTTMLSACD-------GPEFSSVSRMIHGLVFVGGFEREITVGNALITSY 196
D +T LSAC G E S S + ++T+ N+L+ Y
Sbjct: 163 I---ELDGVIVTVALSACADLGAVQMGEEIYSRS-----IKRKRRLAMDLTLRNSLLNMY 214
Query: 197 FKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMR------GGSVSP 250
K G + R++FDE + ++V T+T++I G A N ++ L LF +M+ ++P
Sbjct: 215 VKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITP 274
Query: 251 NTLTYLSSLMACSGVQALAEG-RKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQ 308
N +T++ LMACS + EG R ++ ++ ++DL+ + G L+ A +
Sbjct: 275 NDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHE 333
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 135/452 (29%), Positives = 228/452 (50%), Gaps = 12/452 (2%)
Query: 207 QVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQM------RGGSVSPNTLTYLSSLM 260
Q+F + + W A+I G A + + M + LT +L
Sbjct: 58 QIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLK 117
Query: 261 ACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVS 320
AC+ + ++H + + G+ +D + + L+D YSK G L A+++F+ D S
Sbjct: 118 ACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVAS 177
Query: 321 LTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLII 380
++ EA++++ R+ T GI V A LG + G+ I
Sbjct: 178 WNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENI----F 233
Query: 381 KKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSI-SWNSVIAAFARHGDGSRAL 439
+ N VSN I+MYSKCG + + QVF + T K S+ +WN++I FA HG+ RAL
Sbjct: 234 HGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRAL 293
Query: 440 QFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDM 499
+ ++++ GI P DV++L+ L AC HAGLVE G+ +M + +HY CVVD+
Sbjct: 294 EIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKG-VERNMKHYGCVVDL 352
Query: 500 LGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPH 559
L RAG L+EA + I + ++WQ+LLGA I+ D EM + A+ ++ +
Sbjct: 353 LSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDF 412
Query: 560 VLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIF 619
VL++N+Y+A+G+WK+ M+ K V K G+S+IE + F DK H Q I+
Sbjct: 413 VLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIY 472
Query: 620 LELSRLLKHLKDEGYVPDKRCILYYLDQDKKD 651
++ + ++++GYV +L+ + +++K+
Sbjct: 473 EKIDEIRFKIREDGYVAQTGLVLHDIGEEEKE 504
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 174/375 (46%), Gaps = 12/375 (3%)
Query: 96 GELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQM---SESRTVYSRFDKA 152
G+L A+++F +P T WN++I GF + F +++ M S S + R D
Sbjct: 51 GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDAL 110
Query: 153 TLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEM 212
T + L AC SS +H + G + + L+ +Y K G ++FDEM
Sbjct: 111 TCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEM 170
Query: 213 IERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGR 272
R+V +W A+I+GL + + L+ +M + + +T +++L ACS + + EG
Sbjct: 171 PVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGE 230
Query: 273 KI-HGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFES-AEELDGVSLTVILVAFAQ 330
I HG ++ + +A +D+YSKCG ++ A+Q+FE + V+ ++ FA
Sbjct: 231 NIFHGY-----SNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAV 285
Query: 331 NGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFV 390
+G A++IF ++ GI+ D A L + G + + + K +N
Sbjct: 286 HGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKH 345
Query: 391 SNGLINMYSKCGELHDSLQVFYEMTQ-KNSISWNSVIAAFARHGDGSRALQFYEEMRVGG 449
++++ S+ G L ++ + M+ + + W S++ A + D A E++ G
Sbjct: 346 YGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMG 405
Query: 450 IAPT-DVTFLSLLHA 463
+ D LS ++A
Sbjct: 406 VNNDGDFVLLSNVYA 420
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 133/274 (48%), Gaps = 11/274 (4%)
Query: 86 NSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTV 145
+LL YSK G+L A KLFD MPVRD SWN++I+G + +K+M E+ +
Sbjct: 148 TTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRM-ETEGI 206
Query: 146 YSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFERE-ITVGNALITSYFKCGCFCQ 204
R + T+ L AC S + + G G+ + + V NA I Y KCG +
Sbjct: 207 --RRSEVTVVAALGAC-----SHLGDVKEGENIFHGYSNDNVIVSNAAIDMYSKCGFVDK 259
Query: 205 GRQVFDEMI-ERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACS 263
QVF++ +++VVTW +I+G A + L +F ++ + P+ ++YL++L AC
Sbjct: 260 AYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACR 319
Query: 264 GVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTV 323
+ G + + G++ ++ ++DL S+ G L A I S + L
Sbjct: 320 HAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQ 379
Query: 324 ILVAFAQNGFEEEAIQIFTR-IVTLGIEVDANMV 356
L+ ++ + E +I +R I +G+ D + V
Sbjct: 380 SLLGASEIYSDVEMAEIASREIKEMGVNNDGDFV 413
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 215 bits (547), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 140/544 (25%), Positives = 253/544 (46%), Gaps = 52/544 (9%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDA 101
+ +L CG +L L +H ++K + D + S++ +Y KC + DA
Sbjct: 165 FAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVD--------LETSIVDVYGKCRVMSDA 216
Query: 102 IKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSAC 161
++FD + VSWN ++ +L D F +M E R T+++++ AC
Sbjct: 217 RRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNV---RPLNHTVSSVMLAC 273
Query: 162 DGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKC---------------------- 199
V ++IH + + V ++ Y KC
Sbjct: 274 SRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWT 333
Query: 200 ---------GCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSP 250
G + R++FD M ERN+V+W A++ G +++ L MR +
Sbjct: 334 SAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENI 393
Query: 251 NTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIF 310
+ +T + L CSG+ + G++ HG +++ G +++ + +AL+D+Y KCG+L+ A F
Sbjct: 394 DNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWF 453
Query: 311 ESAEEL-DGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTS- 368
EL D VS +L A+ G E+A+ F G++V+A L G +
Sbjct: 454 RQMSELRDEVSWNALLTGVARVGRSEQALSFFE-----GMQVEAKPSKYTLATLLAGCAN 508
Query: 369 ---LPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSV 425
L LGK IH +I+ + + + +++MYSKC +++VF E ++ I WNS+
Sbjct: 509 IPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSI 568
Query: 426 IAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHR 485
I R+G + + + G+ P VTFL +L AC G VE G ++ SM+ +
Sbjct: 569 IRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYH 628
Query: 486 LSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAA 545
+SP+ EHY C++++ + G L + + F+ +P + + + + AC + S++G +AA
Sbjct: 629 ISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAA 688
Query: 546 DQLI 549
+L+
Sbjct: 689 KRLM 692
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 127/493 (25%), Positives = 229/493 (46%), Gaps = 44/493 (8%)
Query: 82 LFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSE 141
+F+ N + Y KCG + DA +LF+ MP RD SWN++I+ +N D FR F++M+
Sbjct: 96 IFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNR 155
Query: 142 SRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGC 201
R + + +L +C + R +H V G+ + + +++ Y KC
Sbjct: 156 DGV---RATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRV 212
Query: 202 FCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMA 261
R+VFDE++ + V+W ++ + ++ + +F +M +V P T S ++A
Sbjct: 213 MSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLA 272
Query: 262 CSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSL 321
CS AL G+ IH + KL + +D + +++ D+Y KC LE A ++F+ D S
Sbjct: 273 CSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSW 332
Query: 322 TVILVAFAQNGFEEEAIQIFTRIVTLGI-------------------------------E 350
T + +A +G EA ++F + I
Sbjct: 333 TSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIEN 392
Query: 351 VDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQV 410
+D + +L V + + +GKQ H I + + N V+N L++MY KCG L +
Sbjct: 393 IDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIW 452
Query: 411 FYEMTQ-KNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGL 469
F +M++ ++ +SWN+++ AR G +AL F+E M+V P+ T +LL C++
Sbjct: 453 FRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPA 511
Query: 470 VEKGMEFLVSMTRD-HRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPE--NRGVLVWQ 526
+ G + RD +++ +VDM + A IE E R +++W
Sbjct: 512 LNLGKAIHGFLIRDGYKIDVVIR--GAMVDMYSKCRCFDYA---IEVFKEAATRDLILWN 566
Query: 527 ALLGACSIHGDSE 539
+++ C +G S+
Sbjct: 567 SIIRGCCRNGRSK 579
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/406 (25%), Positives = 187/406 (46%), Gaps = 33/406 (8%)
Query: 190 NALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVS 249
N I +Y KCGC R++F+EM ER+ +W AVI+ AQN + ++ R+F +M V
Sbjct: 100 NRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVR 159
Query: 250 PNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQI 309
++ L +C + L R++H + K G ++ +E++++D+Y KC + A ++
Sbjct: 160 ATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRV 219
Query: 310 FESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSL 369
F+ VS VI+ + + GF +EA+ +F +++ L + + VS+V+ +L
Sbjct: 220 FDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLAL 279
Query: 370 PLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYE---------------- 413
+GK IH++ +K + + VS + +MY KC L + +VF +
Sbjct: 280 EVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGY 339
Query: 414 ---------------MTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFL 458
M ++N +SWN+++ + + AL F MR +VT +
Sbjct: 340 AMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLV 399
Query: 459 SLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPE 518
+L+ CS V+ G + + R H ++DM G+ G L+ A + + E
Sbjct: 400 WILNVCSGISDVQMGKQAHGFIYR-HGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSE 458
Query: 519 NRGVLVWQALLGACSIHGDSEMG-KFAADQLILAAPASSAPHVLMA 563
R + W ALL + G SE F + A P+ L+A
Sbjct: 459 LRDEVSWNALLTGVARVGRSEQALSFFEGMQVEAKPSKYTLATLLA 504
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 133/274 (48%), Gaps = 24/274 (8%)
Query: 37 LNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCG 96
+++ L +L+VC ++ +G H I + +D++ + V N+LL MY KCG
Sbjct: 393 IDNVTLVWILNVCSGISDVQMGKQAHGFIYRH----GYDTN----VIVANALLDMYGKCG 444
Query: 97 ELQDAIKLFDRMP-VRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLT 155
LQ A F +M +RD VSWN++++G R + FF+ M V ++ K TL
Sbjct: 445 TLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQ----VEAKPSKYTLA 500
Query: 156 TMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIER 215
T+L+ C ++ + IHG + G++ ++ + A++ Y KC CF +VF E R
Sbjct: 501 TLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATR 560
Query: 216 NVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIH 275
+++ W ++I G +N ++ LF + V P+ +T+L L AC + EG
Sbjct: 561 DLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQAC-----IREGHVEL 615
Query: 276 GLLWKLGMQSDLCIE------SALMDLYSKCGSL 303
G + M + I +++LY K G L
Sbjct: 616 GFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCL 649
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 145/335 (43%), Gaps = 43/335 (12%)
Query: 238 RLFAQMRGGSVS---------PNTLTYL---SSLMACSGVQALAEGRKIHGLLWKLGMQS 285
++ + GG+VS P ++Y +CS + + RK+ L
Sbjct: 35 QILEHLEGGNVSKAVSVLFASPEPVSYWLYERLFRSCSSKALVVQARKVQSHLVTFSPLP 94
Query: 286 DLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIV 345
+ + + ++ Y KCG ++ A ++FE E DG S ++ A AQNG +E ++F R+
Sbjct: 95 PIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMN 154
Query: 346 TLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELH 405
G+ + VL G+ L L +Q+H ++K +S N + ++++Y KC +
Sbjct: 155 RDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMS 214
Query: 406 DSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACS 465
D+ +VF E+ + +SWN ++ + G A+ + +M + P + T S++ ACS
Sbjct: 215 DARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACS 274
Query: 466 HAGLVEKG----------------------MEFLVSMTR--------DHRLSPRSEHYAC 495
+ +E G + V R D S + +
Sbjct: 275 RSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTS 334
Query: 496 VVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLG 530
+ +GL +EA+ + +PE R ++ W A+LG
Sbjct: 335 AMSGYAMSGLTREARELFDLMPE-RNIVSWNAMLG 368
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 215 bits (547), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 131/473 (27%), Positives = 235/473 (49%), Gaps = 43/473 (9%)
Query: 220 WTAVISGLAQN---ELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHG 276
W +I + N + ++ +MR VSP+ T+ L + L G++ H
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 277 LLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEE 336
+ G+ D + ++L+++YS CG L A ++F+ + D + ++ A+A+ G ++
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDD 146
Query: 337 AIQIFTRI---------------VTLG---------------------IEVDANMVSAVL 360
A ++F + V G + + +S VL
Sbjct: 147 ARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVL 206
Query: 361 GVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSI 420
G +L GK +H+ I K + + + LI+MY+KCG L + +VF + K +
Sbjct: 207 SACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDV 266
Query: 421 -SWNSVIAAFARHGDGSRALQFYEEMRVG-GIAPTDVTFLSLLHACSHAGLVEKGMEFLV 478
+++++I A +G Q + EM I P VTF+ +L AC H GL+ +G +
Sbjct: 267 KAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFK 326
Query: 479 SMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDS 538
M + ++P +HY C+VD+ GR+GL+KEA++FI +P VL+W +LL + GD
Sbjct: 327 MMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDI 386
Query: 539 EMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEI 598
+ + A +LI P +S +VL++N+Y+ G+W E M+ KG+ K G S++E+
Sbjct: 387 KTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEV 446
Query: 599 DKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDEGYVPDKRCILYYLDQDKKD 651
+ V FVVGD+ +++ I+ L +++ L++ GYV D + +L LD ++KD
Sbjct: 447 EGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVL--LDLNEKD 497
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 152/298 (51%), Gaps = 22/298 (7%)
Query: 149 FDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQV 208
F + +L M S+C + S R VF +++ N+++ +Y K G R++
Sbjct: 98 FVRTSLLNMYSSCG--DLRSAQR-----VFDDSGSKDLPAWNSVVNAYAKAGLIDDARKL 150
Query: 209 FDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMR-----GGSVSPNTLTYLSSLMACS 263
FDEM ERNV++W+ +I+G Y++ L LF +M+ V PN T + L AC
Sbjct: 151 FDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACG 210
Query: 264 GVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFES-AEELDGVSLT 322
+ AL +G+ +H + K ++ D+ + +AL+D+Y+KCGSLE A ++F + + D + +
Sbjct: 211 RLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYS 270
Query: 323 VILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPL---GKQIHSLI 379
++ A G +E Q+F+ + T ++ N V+ V G+ G L GK ++
Sbjct: 271 AMICCLAMYGLTDECFQLFSEMTT-SDNINPNSVTFV-GILGACVHRGLINEGKSYFKMM 328
Query: 380 IKKNFSQNPFVSN--GLINMYSKCGELHDSLQVFYEMT-QKNSISWNSVIAAFARHGD 434
I++ F P + + ++++Y + G + ++ M + + + W S+++ GD
Sbjct: 329 IEE-FGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGD 385
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 130/238 (54%), Gaps = 5/238 (2%)
Query: 74 FDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGF 133
FD S L WNS+++ Y+K G + DA KLFD MP R+ +SW+ +I+G++ +
Sbjct: 120 FDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEAL 179
Query: 134 RFFKQMS--ESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNA 191
F++M + + R ++ T++T+LSAC + +H + E +I +G A
Sbjct: 180 DLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTA 239
Query: 192 LITSYFKCGCFCQGRQVFDEM-IERNVVTWTAVISGLAQNELYEDGLRLFAQM-RGGSVS 249
LI Y KCG + ++VF+ + +++V ++A+I LA L ++ +LF++M +++
Sbjct: 240 LIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNIN 299
Query: 250 PNTLTYLSSLMACSGVQALAEGRKIHGLLW-KLGMQSDLCIESALMDLYSKCGSLEGA 306
PN++T++ L AC + EG+ ++ + G+ + ++DLY + G ++ A
Sbjct: 300 PNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEA 357
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 26 QYPFPATSESVLNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVW 85
Q P P + N +S++LS CGR G L G +HA I K D + +
Sbjct: 186 QLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKY--HVEID------IVLG 237
Query: 86 NSLLSMYSKCGELQDAIKLFDRM-PVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRT 144
+L+ MY+KCG L+ A ++F+ + +D ++++MI D F+ F +M+ S
Sbjct: 238 TALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDN 297
Query: 145 VYSRFDKATLTTMLSACDG----PEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCG 200
+ + T +L AC E S +M ++ G I ++ Y + G
Sbjct: 298 INP--NSVTFVGILGACVHRGLINEGKSYFKM---MIEEFGITPSIQHYGCMVDLYGRSG 352
Query: 201 CFCQGRQVFDEM-IERNVVTWTAVISG 226
+ M +E +V+ W +++SG
Sbjct: 353 LIKEAESFIASMPMEPDVLIWGSLLSG 379
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 167/645 (25%), Positives = 285/645 (44%), Gaps = 72/645 (11%)
Query: 18 LKSKAPISQYPFPATSESVLNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSS 77
K K+ ++ FPA ++ + +H SL+ C +L +HA+I+++ SS
Sbjct: 8 FKPKSSPAKIYFPADRQASPDESHFISLIHACKDTASLR---HVHAQILRRGVL----SS 60
Query: 78 RRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFK 137
R V L+S S ++ +F R+ N++I G N F++ R F
Sbjct: 61 R-----VAAQLVSCSSLLKSPDYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFI 115
Query: 138 QMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYF 197
M + + D+ T +L + F + R +H + + V +L+ Y
Sbjct: 116 LMLR---LGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYA 172
Query: 198 KCGCFCQGRQVFDEMIER----NVVTWTAVISGLAQNELYEDGLRLFAQM---RGGSVSP 250
K G QVF+E +R +++ W +I+G + + LF M GS
Sbjct: 173 KTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGS--- 229
Query: 251 NTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIF 310
W S L+ Y G L A Q+F
Sbjct: 230 ----------------------------W-----------STLIKGYVDSGELNRAKQLF 250
Query: 311 ESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLP 370
E E + VS T ++ F+Q G E AI + ++ G++ + ++AVL +L
Sbjct: 251 ELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALG 310
Query: 371 LGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFA 430
G +IH I+ + + L++MY+KCGEL + VF M K+ +SW ++I +A
Sbjct: 311 SGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWA 370
Query: 431 RHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRS 490
HG +A+Q + +M G P +V FL++L AC ++ V+ G+ F SM D+ + P
Sbjct: 371 VHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTL 430
Query: 491 EHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLIL 550
+HY VVD+LGRAG L EA +E +P N + W AL AC H + + L+
Sbjct: 431 KHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLE 490
Query: 551 AAPASSAPHVLMANIYSAEGKW----KERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFV 606
P ++ + ++++G K R KR+KE+ +G S+IE+D Q++ F
Sbjct: 491 LDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERS----LGWSYIELDGQLNKFS 546
Query: 607 VGDKLHPQADIIFLELSRLLKHLKDEGYVPDKRCILYYLDQDKKD 651
GD H I L+L ++ +GY P ++ +++++K+
Sbjct: 547 AGDYSHKLTQEIGLKLDEIISLAIQKGYNPGADWSIHDIEEEEKE 591
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 213 bits (542), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 206/376 (54%), Gaps = 4/376 (1%)
Query: 277 LLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEE 336
LLW L + +C + +++ K G A ++ +A + + ++ +++ + +N EE
Sbjct: 88 LLWFLSLSPGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEE 147
Query: 337 AIQIFTRIVTL-GIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLI 395
A++ +++ I+ + ++ L L K +HSL+I N +S+ L+
Sbjct: 148 ALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALV 207
Query: 396 NMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDV 455
++Y+KCG++ S +VFY + + + WN++I FA HG + A++ + EM ++P +
Sbjct: 208 DVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSI 267
Query: 456 TFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEG 515
TFL LL CSH GL+E+G E+ M+R + P+ EHY +VD+LGRAG +KEA IE
Sbjct: 268 TFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIES 327
Query: 516 LPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKER 575
+P V++W++LL + + + E+G+ A L + A S +VL++NIYS+ KW+
Sbjct: 328 MPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNL---SKAKSGDYVLLSNIYSSTKKWESA 384
Query: 576 AGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDEGYV 635
+ M ++G+ K G SW+E + F GD H + I+ L L++ K +G+V
Sbjct: 385 QKVRELMSKEGIRKAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFV 444
Query: 636 PDKRCILYYLDQDKKD 651
D +L + +++K+
Sbjct: 445 SDTDLVLMDVSEEEKE 460
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 117/228 (51%), Gaps = 3/228 (1%)
Query: 86 NSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTV 145
N ++ K GE A K+ ++ ++WN MI G++RN ++ + K M +
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 146 YSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQG 205
+ +K + + L+AC ++ +H L+ G E + +AL+ Y KCG
Sbjct: 162 --KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTS 219
Query: 206 RQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGV 265
R+VF + +V W A+I+G A + L + +R+F++M VSP+++T+L L CS
Sbjct: 220 REVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHC 279
Query: 266 QALAEGRKIHGLL-WKLGMQSDLCIESALMDLYSKCGSLEGAWQIFES 312
L EG++ GL+ + +Q L A++DL + G ++ A+++ ES
Sbjct: 280 GLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIES 327
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 122/243 (50%), Gaps = 5/243 (2%)
Query: 190 NALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRG-GSV 248
N +I S K G ++V ++NV+TW +I G +N YE+ L+ M +
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 249 SPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQ 308
PN ++ SSL AC+ + L + +H L+ G++ + + SAL+D+Y+KCG + + +
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSRE 221
Query: 309 IFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTS 368
+F S + D ++ FA +G EAI++F+ + + D+ +L
Sbjct: 222 VFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGL 281
Query: 369 LPLGKQIHSLIIKKNFSQNPFVSN--GLINMYSKCGELHDSLQVFYEM-TQKNSISWNSV 425
L GK+ L+ ++ FS P + + ++++ + G + ++ ++ M + + + W S+
Sbjct: 282 LEEGKEYFGLMSRR-FSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSL 340
Query: 426 IAA 428
+++
Sbjct: 341 LSS 343
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 87/195 (44%), Gaps = 23/195 (11%)
Query: 38 NHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGE 97
N +S L+ C R G+LH +H+ +I DS + ++L+ +Y+KCG+
Sbjct: 164 NKFSFASSLAACARLGDLHHAKWVHSLMI--------DSGIELNAILSSALVDVYAKCGD 215
Query: 98 LQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTM 157
+ + ++F + D WN+MI+GF + R F +M E+ V D T +
Sbjct: 216 IGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEM-EAEHVSP--DSITFLGL 272
Query: 158 LSACDGPEFSSVSRMIHGLVFVGGFEREITVG------NALITSYFKCGCFCQGRQVFDE 211
L+ C S + G + G R ++ A++ + G + ++ +
Sbjct: 273 LTTC-----SHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIES 327
Query: 212 M-IERNVVTWTAVIS 225
M IE +VV W +++S
Sbjct: 328 MPIEPDVVIWRSLLS 342
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 212 bits (539), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 136/468 (29%), Positives = 231/468 (49%), Gaps = 38/468 (8%)
Query: 160 ACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVT 219
AC P + +++H G ++ VG++LI+ Y KCGC R+VFDEM ERNV T
Sbjct: 56 ACVVPRVV-LGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVAT 114
Query: 220 WTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLL- 278
W A+I G N LF ++ SV NT+T++ + + + R++ +
Sbjct: 115 WNAMIGGYMSNGDAVLASGLFEEI---SVCRNTVTWIEMIKGYGKRIEIEKARELFERMP 171
Query: 279 --------WKLGM--------------------QSDLCIESALMDLYSKCGSLEGAWQIF 310
W + + + + + S +M Y + G + A IF
Sbjct: 172 FELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIF 231
Query: 311 ESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLP 370
D V ++ +AQNG+ ++AI F + G E DA VS++L L
Sbjct: 232 YRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLD 291
Query: 371 LGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFA 430
+G+++HSLI + N FVSN LI+MY+KCG+L ++ VF ++ ++ NS+I+ A
Sbjct: 292 VGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLA 351
Query: 431 RHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRS 490
HG G AL+ + M + P ++TF+++L AC H G + +G++ M + + P
Sbjct: 352 IHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEM-KTQDVKPNV 410
Query: 491 EHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLIL 550
+H+ C++ +LGR+G LKEA ++ + V ALLGAC +H D+EM + +
Sbjct: 411 KHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMKIIET 470
Query: 551 AAPAS---SAPHVL-MANIYSAEGKWKERAGAIKRMKEKGVAKEVGVS 594
A + S H+ ++N+Y+ +W+ M+++G+ K G+S
Sbjct: 471 AGSITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLS 518
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 185/394 (46%), Gaps = 28/394 (7%)
Query: 82 LFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSE 141
+ V +SL+SMY KCG + A K+FD MP R+ +WN+MI G++ N D F+++S
Sbjct: 81 VMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISV 140
Query: 142 SRTVYS------------RFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGG-------- 181
R + +KA + + S M+ V+V
Sbjct: 141 CRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLG--VYVNNRKMEDARK 198
Query: 182 FEREITVGNALITS-----YFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDG 236
F +I NA + S YF+ G + R +F + R++V W +I+G AQN +D
Sbjct: 199 FFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDA 258
Query: 237 LRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDL 296
+ F M+G P+ +T S L AC+ L GR++H L+ G++ + + +AL+D+
Sbjct: 259 IDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDM 318
Query: 297 YSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMV 356
Y+KCG LE A +FES ++ A +G +EA+++F+ + +L ++ D
Sbjct: 319 YAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITF 378
Query: 357 SAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQ 416
AVL G L G +I S + ++ N LI++ + G+L ++ ++ EM
Sbjct: 379 IAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHV 438
Query: 417 K-NSISWNSVIAAFARHGDGSRALQFYEEMRVGG 449
K N +++ A H D A Q + + G
Sbjct: 439 KPNDTVLGALLGACKVHMDTEMAEQVMKIIETAG 472
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 94/225 (41%), Gaps = 53/225 (23%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDA 101
+SS+LS C + G L +G +H+ I + + FV N+L+ MY+KCG+L++A
Sbjct: 277 VSSILSACAQSGRLDVGREVHSLINHRGIELN--------QFVSNALIDMYAKCGDLENA 328
Query: 102 IKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSAC 161
+F+ + VR NSMIS + F M ++ + D+ T +L+AC
Sbjct: 329 TSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTM---ESLDLKPDEITFIAVLTAC 385
Query: 162 DGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEM----IERNV 217
+HG G +G ++F EM ++ NV
Sbjct: 386 -----------VHG------------------------GFLMEGLKIFSEMKTQDVKPNV 410
Query: 218 VTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMAC 262
+ +I L ++ ++ RL +M V PN + L AC
Sbjct: 411 KHFGCLIHLLGRSGKLKEAYRLVKEMH---VKPNDTVLGALLGAC 452
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 123/394 (31%), Positives = 202/394 (51%), Gaps = 6/394 (1%)
Query: 219 TWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLL 278
TW + G + ++ + + ++++M+ + PN LT+ L AC+ L GR+I +
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEV 139
Query: 279 WKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAI 338
K G D+ + + L+ LY C A ++F+ E + VS I+ A +NG
Sbjct: 140 LKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVF 199
Query: 339 QIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMY 398
+ F ++ G + + V+ + G +L LGK +HS ++ + N + L++MY
Sbjct: 200 ECFCEMI--GKRFCPDETTMVVLLSACGGNLSLGKLVHSQVMVRELELNCRLGTALVDMY 257
Query: 399 SKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEM-RVGGIAPTDVTF 457
+K G L + VF M KN +W+++I A++G ALQ + +M + + P VTF
Sbjct: 258 AKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTF 317
Query: 458 LSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLP 517
L +L ACSH GLV+ G ++ M + H++ P HY +VD+LGRAG L EA +FI+ +P
Sbjct: 318 LGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMP 377
Query: 518 ENRGVLVWQALLGACSIHGDSE---MGKFAADQLILAAPASSAPHVLMANIYSAEGKWKE 574
+VW+ LL ACSIH D + +G+ +LI P S V++AN ++ W E
Sbjct: 378 FEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAE 437
Query: 575 RAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVG 608
A + MKE + K G S +E+ F G
Sbjct: 438 AAEVRRVMKETKMKKIAGESCLELGGSFHRFFSG 471
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 160/327 (48%), Gaps = 16/327 (4%)
Query: 115 SWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIH 174
+WN + G+ + D+ SE + + +K T +L AC + R I
Sbjct: 80 TWNMLSRGYSSS---DSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQ 136
Query: 175 GLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYE 234
V GF+ ++ VGN LI Y C R+VFDEM ERNVV+W ++++ L +N
Sbjct: 137 VEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLN 196
Query: 235 DGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALM 294
F +M G P+ T + L AC G L+ G+ +H + ++ + + +AL+
Sbjct: 197 LVFECFCEMIGKRFCPDETTMVVLLSACGG--NLSLGKLVHSQVMVRELELNCRLGTALV 254
Query: 295 DLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDAN 354
D+Y+K G LE A +FE + + + + ++V AQ GF EEA+Q+F++++ V N
Sbjct: 255 DMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKES-SVRPN 313
Query: 355 MVSAVLGVFGVGTSLPL----GKQIHSLIIKKNFSQNPFVSN--GLINMYSKCGELHDSL 408
V+ LGV + L K H + +K P + + ++++ + G L+++
Sbjct: 314 YVT-FLGVLCACSHTGLVDDGYKYFHEM--EKIHKIKPMMIHYGAMVDILGRAGRLNEAY 370
Query: 409 QVFYEMT-QKNSISWNSVIAAFARHGD 434
+M + +++ W ++++A + H D
Sbjct: 371 DFIKKMPFEPDAVVWRTLLSACSIHHD 397
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 131/455 (28%), Positives = 232/455 (50%), Gaps = 14/455 (3%)
Query: 174 HGLVFVGGFEREITVGNALITSYFKC----GCFCQGRQVFDEMIERNVVTWTAVISGLAQ 229
H L + G R + L+T++ F +FD + N + +I ++
Sbjct: 31 HSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSR 90
Query: 230 NELYEDGLRLFAQM---RGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGM-QS 285
+ GLR F M ++P+ LT+ ++AC + G++IH + K G+ S
Sbjct: 91 SSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLS 150
Query: 286 DLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIV 345
D +++ ++ +Y + L A ++F+ + D V V++ + + G E +++F ++
Sbjct: 151 DSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREML 210
Query: 346 TLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQ-NPFVSNGLINMYSKCGEL 404
G+E D V+ L +L GK IH + KK++ + + FV L++MY+KCG +
Sbjct: 211 VKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCI 270
Query: 405 HDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEM-RVGGIAPTDVTFLSLLHA 463
+++VF ++T++N SW ++I +A +G +A+ E + R GI P V L +L A
Sbjct: 271 ETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAA 330
Query: 464 CSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVL 523
C+H G +E+G L +M + ++P+ EHY+C+VD++ RAG L +A N IE +P
Sbjct: 331 CAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLAS 390
Query: 524 VWQALLGACSIHGDSEMGKFAADQLILAAPAS----SAPHVLMANIYSAEGKWKERAGAI 579
VW ALL C H + E+G+ A L+ + A V ++NIY + + E +
Sbjct: 391 VWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVR 450
Query: 580 KRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQ 614
++++GV K G S +E+D V+ FV GD HP
Sbjct: 451 GMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSHPN 485
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 128/273 (46%), Gaps = 19/273 (6%)
Query: 45 LLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKL 104
L+ C + +G IH ++K F S DS V +L +Y + L DA K+
Sbjct: 122 LIVACLKACFFSVGKQIHCWVVKNGVFLS-DSH------VQTGVLRIYVEDKLLLDARKV 174
Query: 105 FDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGP 164
FD +P D V W+ +++G++R G F++M D+ ++TT L+AC
Sbjct: 175 FDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGL---EPDEFSVTTALTACAQV 231
Query: 165 EFSSVSRMIHGLVFVGGF-EREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAV 223
+ + IH V + E ++ VG AL+ Y KCGC +VF ++ RNV +W A+
Sbjct: 232 GALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAAL 291
Query: 224 ISGLAQNELYEDGLRLFAQM-RGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLG 282
I G A + + ++ R + P+++ L L AC+ L EGR +L +
Sbjct: 292 IGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGR---SMLENME 348
Query: 283 MQSDLCIE----SALMDLYSKCGSLEGAWQIFE 311
+ ++ + S ++DL + G L+ A + E
Sbjct: 349 ARYEITPKHEHYSCIVDLMCRAGRLDDALNLIE 381
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 209 bits (532), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 130/414 (31%), Positives = 212/414 (51%), Gaps = 3/414 (0%)
Query: 185 EITVGNALITSYFKCG-CFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQM 243
+ + + L+ +Y K F VF M RN+ +W +I +++ + LF +M
Sbjct: 65 NVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRM 124
Query: 244 -RGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGS 302
R V P+ T L ACS + G IH L KLG S L + SAL+ +Y G
Sbjct: 125 WRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGK 184
Query: 303 LEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGV 362
L A ++F+ D V T + + Q G + +F + G +D+ ++ ++L
Sbjct: 185 LLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMA 244
Query: 363 FGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISW 422
G +L GK +H I++ + N + +MY KC L + VF M++++ ISW
Sbjct: 245 CGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISW 304
Query: 423 NSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTR 482
+S+I + GD + + ++EM GI P VTFL +L AC+H GLVEK + + +
Sbjct: 305 SSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYF-RLMQ 363
Query: 483 DHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGK 542
++ + P +HYA V D + RAGLL+EA+ F+E +P V A+L C ++G+ E+G+
Sbjct: 364 EYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGE 423
Query: 543 FAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWI 596
A +LI P ++ +V +A +YSA G++ E + MKEK ++K G S I
Sbjct: 424 RVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 109/442 (24%), Positives = 190/442 (42%), Gaps = 51/442 (11%)
Query: 86 NSLLSMYSKCGEL-QDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRT 144
+ L+ YSK L ++ +F MP R+ SWN +I F R+ F +M
Sbjct: 70 SKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESC 129
Query: 145 VYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQ 204
V R D TL +L AC + +IH L GF + V +AL+ Y G
Sbjct: 130 V--RPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLH 187
Query: 205 GRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSG 264
R++FD+M R+ V +TA+ G Q GL +F +M + +++ +S LMAC
Sbjct: 188 ARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQ 247
Query: 265 VQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVI 324
+ AL G+ +HG + L + +A+ D+Y KC L+ A +F + D +S + +
Sbjct: 248 LGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSL 307
Query: 325 LVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNF 384
++ + +G + ++F ++ GIE +A LGV L H +++K++
Sbjct: 308 ILGYGLDGDVVMSFKLFDEMLKEGIEPNA---VTFLGV--------LSACAHGGLVEKSW 356
Query: 385 SQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSI-----SWNSVIAAFARHGDGSRAL 439
+++ + Q+ +I + SV +R G A
Sbjct: 357 -------------------------LYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAE 391
Query: 440 QFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPR-SEHYACVVD 498
+F E+M V P + ++L C G VE G + +L PR + +Y +
Sbjct: 392 KFLEDMPV---KPDEAVMGAVLSGCKVYGNVEVGERVARELI---QLKPRKASYYVTLAG 445
Query: 499 MLGRAGLLKEAKNFIEGLPENR 520
+ AG EA++ + + E +
Sbjct: 446 LYSAAGRFDEAESLRQWMKEKQ 467
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 123/272 (45%), Gaps = 15/272 (5%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDA 101
L +L C G IH +K F SS LFV ++L+ MY G+L A
Sbjct: 137 LPLILRACSASREAKSGDLIHVLCLK----LGFSSS----LFVSSALVIMYVDMGKLLHA 188
Query: 102 IKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRF--DKATLTTMLS 159
KLFD MPVRD+V + +M G+++ + G F++M YS F D + ++L
Sbjct: 189 RKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMG-----YSGFALDSVVMVSLLM 243
Query: 160 ACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVT 219
AC + +HG + +GNA+ Y KC VF M R+V++
Sbjct: 244 ACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVIS 303
Query: 220 WTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLW 279
W+++I G + +LF +M + PN +T+L L AC+ + + L+
Sbjct: 304 WSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQ 363
Query: 280 KLGMQSDLCIESALMDLYSKCGSLEGAWQIFE 311
+ + +L +++ D S+ G LE A + E
Sbjct: 364 EYNIVPELKHYASVADCMSRAGLLEEAEKFLE 395
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 11/125 (8%)
Query: 37 LNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCG 96
L+ + SLL CG+ G L G S+H I++ + + N++ MY KC
Sbjct: 233 LDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLN--------LGNAITDMYVKCS 284
Query: 97 ELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTT 156
L A +F M RD +SW+S+I G+ + D F+ F +M + + T
Sbjct: 285 ILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGI---EPNAVTFLG 341
Query: 157 MLSAC 161
+LSAC
Sbjct: 342 VLSAC 346
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 208 bits (530), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 129/495 (26%), Positives = 241/495 (48%), Gaps = 43/495 (8%)
Query: 101 AIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSA 160
A + +R+ + + NS+I + + + F++M V+ DK + T +L A
Sbjct: 93 AHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLG-PVFP--DKYSFTFVLKA 149
Query: 161 CDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTW 220
C R IHGL G ++ V N L+ Y + G F R+V D M R+ V+W
Sbjct: 150 CAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSW 209
Query: 221 TAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWK 280
+++S + L ++ LF +M E R + W
Sbjct: 210 NSLLSAYLEKGLVDEARALFDEM--------------------------EERNVES--WN 241
Query: 281 LGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQI 340
++ Y+ G ++ A ++F+S D VS ++ A+A G E +++
Sbjct: 242 F-----------MISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEV 290
Query: 341 FTRIVTLGIE-VDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYS 399
F +++ E D + +VL SL G+ +H I K F++ L++MYS
Sbjct: 291 FNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYS 350
Query: 400 KCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLS 459
KCG++ +L+VF ++++ +WNS+I+ + HG G AL+ + EM G P +TF+
Sbjct: 351 KCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIG 410
Query: 460 LLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPEN 519
+L AC+H G++++ + M+ +R+ P EHY C+VD+LGR G ++EA+ + +P +
Sbjct: 411 VLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPAD 470
Query: 520 RGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAI 579
++ ++LLGAC G E + A++L+ S+ + M+N+Y+++G+W++
Sbjct: 471 EASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGR 530
Query: 580 KRMKEKGVAKEVGVS 594
+ M+ + V + + V+
Sbjct: 531 RNMRAERVNRSLDVA 545
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 182/400 (45%), Gaps = 59/400 (14%)
Query: 45 LLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKL 104
+L C G IH IK S +FV N+L+++Y + G + A K+
Sbjct: 146 VLKACAAFCGFEEGRQIHGLFIK--------SGLVTDVFVENTLVNVYGRSGYFEIARKV 197
Query: 105 FDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGP 164
DRMPVRD VSWNS++S +L D F +M
Sbjct: 198 LDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEME------------------------ 233
Query: 165 EFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVI 224
ER + N +I+ Y G + ++VFD M R+VV+W A++
Sbjct: 234 ------------------ERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMV 275
Query: 225 SGLAQNELYEDGLRLFAQMRGGSVS-PNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGM 283
+ A Y + L +F +M S P+ T +S L AC+ + +L++G +H + K G+
Sbjct: 276 TAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGI 335
Query: 284 QSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTR 343
+ + + +AL+D+YSKCG ++ A ++F + + D + I+ + +G ++A++IF+
Sbjct: 336 EIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSE 395
Query: 344 IVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSL--IIKKNFSQNPFVSN--GLINMYS 399
+V G + + +GV + + Q L ++ + P + + ++++
Sbjct: 396 MVYEGFKPNG---ITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLG 452
Query: 400 KCGELHDSLQVFYEM-TQKNSISWNSVIAAFARHGDGSRA 438
+ G++ ++ ++ E+ + SI S++ A R G +A
Sbjct: 453 RMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQA 492
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 144/279 (51%), Gaps = 6/279 (2%)
Query: 74 FDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGF 133
FD + WN ++S Y+ G +++A ++FD MPVRD VSWN+M++ + ++
Sbjct: 229 FDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVL 288
Query: 134 RFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALI 193
F +M + T + D TL ++LSAC S +H + G E E + AL+
Sbjct: 289 EVFNKMLDDST--EKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALV 346
Query: 194 TSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTL 253
Y KCG + +VF +R+V TW ++IS L+ + L +D L +F++M PN +
Sbjct: 347 DMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGI 406
Query: 254 TYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIE--SALMDLYSKCGSLEGAWQIF- 310
T++ L AC+ V L + RK+ ++ + + + IE ++DL + G +E A ++
Sbjct: 407 TFIGVLSACNHVGMLDQARKLFEMMSSV-YRVEPTIEHYGCMVDLLGRMGKIEEAEELVN 465
Query: 311 ESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGI 349
E + + L +L A + G E+A +I R++ L +
Sbjct: 466 EIPADEASILLESLLGACKRFGQLEQAERIANRLLELNL 504
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 202 bits (514), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 127/435 (29%), Positives = 218/435 (50%), Gaps = 37/435 (8%)
Query: 220 WTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLW 279
W VI G + + E + ++ QM + P+ +TY + + S + G +H +
Sbjct: 76 WNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVV 135
Query: 280 KLGMQSDLCIESAL-------------------------------MDLYSKCGSLEGAWQ 308
K G++ DL I + L +D Y+K G + A
Sbjct: 136 KSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARL 195
Query: 309 IFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEV--DANMVSAVLGVFGVG 366
+F+ E D V+ + ++ + + G +A++IF +++ +G + MVS + +G
Sbjct: 196 VFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLG 255
Query: 367 TSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQK--NSISWNS 424
+L GK +H I+ + + LI+MY+KCG + D+ VFY + K +++ WN+
Sbjct: 256 -ALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNA 314
Query: 425 VIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDH 484
+I A HG +LQ + +MR I P ++TFL LL ACSH GLV++ F S+ ++
Sbjct: 315 IIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSL-KES 373
Query: 485 RLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFA 544
P+SEHYAC+VD+L RAGL+K+A +FI +P + ALL C HG+ E+ +
Sbjct: 374 GAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETV 433
Query: 545 ADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSS 604
+LI P + +V +AN+Y+ +++ + M++KGV K G S +++D
Sbjct: 434 GKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHR 493
Query: 605 FVVGDKLHPQADIIF 619
F+ DK H +D I+
Sbjct: 494 FIAHDKTHFHSDKIY 508
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 141/312 (45%), Gaps = 6/312 (1%)
Query: 74 FDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGF 133
FD L WNS+L Y+K G++ A +FD M RD V+W+SMI G+++ +++
Sbjct: 166 FDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKAL 225
Query: 134 RFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALI 193
F QM R S+ ++ T+ +++ AC + + +H + + + +LI
Sbjct: 226 EIFDQM--MRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLI 283
Query: 194 TSYFKCGCFCQGRQVF--DEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPN 251
Y KCG VF + E + + W A+I GLA + + L+LF +MR + P+
Sbjct: 284 DMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPD 343
Query: 252 TLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQ-IF 310
+T+L L ACS + E L + G + + ++D+ S+ G ++ A I
Sbjct: 344 EITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFIS 403
Query: 311 ESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLP 370
E + G L +L +G E A + +++ L D V + V+ +
Sbjct: 404 EMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYV-GLANVYAINKQFR 462
Query: 371 LGKQIHSLIIKK 382
+ + + KK
Sbjct: 463 AARSMREAMEKK 474
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 135/309 (43%), Gaps = 46/309 (14%)
Query: 83 FVWNSL-LSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSE 141
FV +L S S G++ A K ++ WN +I GF +R+ + + QM
Sbjct: 42 FVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQML- 100
Query: 142 SRTVYSRF----DKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYF 197
RF D T ++ + + +H V G E ++ + N LI Y
Sbjct: 101 ------RFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYG 154
Query: 198 KCGCFCQGRQVFDEMIERN-------------------------------VVTWTAVISG 226
R++FDEM +N VVTW+++I G
Sbjct: 155 SFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDG 214
Query: 227 LAQNELYEDGLRLFAQ-MRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQS 285
+ Y L +F Q MR GS N +T +S + AC+ + AL G+ +H + + +
Sbjct: 215 YVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPL 274
Query: 286 DLCIESALMDLYSKCGSLEGAWQIF--ESAEELDGVSLTVILVAFAQNGFEEEAIQIFTR 343
+ ++++L+D+Y+KCGS+ AW +F S +E D + I+ A +GF E++Q+F +
Sbjct: 275 TVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHK 334
Query: 344 IVTLGIEVD 352
+ I+ D
Sbjct: 335 MRESKIDPD 343
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 202 bits (513), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 129/455 (28%), Positives = 229/455 (50%), Gaps = 14/455 (3%)
Query: 174 HGLVFVGGFEREITVGNALITSYFKCGC----FCQGRQVFDEMIERNVVTWTAVISGLAQ 229
H L + G R + L+T++ F +FD + N + +I ++
Sbjct: 31 HSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSR 90
Query: 230 NELYEDGLRLFAQM---RGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGM-QS 285
+ GLR F M ++P+ LT+ ++AC + G++IH + K G+ S
Sbjct: 91 SSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLS 150
Query: 286 DLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIV 345
D +++ ++ +Y + L A ++F+ + D V V++ + + G E +++F ++
Sbjct: 151 DGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEML 210
Query: 346 TLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQ-NPFVSNGLINMYSKCGEL 404
GIE D V+ L +L GK IH + KK + + + FV L++MY+KCG +
Sbjct: 211 VRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCI 270
Query: 405 HDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEM-RVGGIAPTDVTFLSLLHA 463
+++VF ++T++N SW ++I +A +G +A + + R GI P V L +L A
Sbjct: 271 ETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAA 330
Query: 464 CSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVL 523
C+H G +E+G L +M + ++P+ EHY+C+VD++ RAG L +A + IE +P
Sbjct: 331 CAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLAS 390
Query: 524 VWQALLGACSIHGDSEMGKFAADQLILAAPAS----SAPHVLMANIYSAEGKWKERAGAI 579
VW ALL C H + E+G+ A L+ + A V ++NIY + + E
Sbjct: 391 VWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVR 450
Query: 580 KRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQ 614
++++G+ K G S +E+D V+ FV GD HP
Sbjct: 451 GMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPN 485
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 126/270 (46%), Gaps = 13/270 (4%)
Query: 45 LLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKL 104
L+ C + +G IH ++K F S V +L +Y + L DA K+
Sbjct: 122 LIVACLKACFFSVGKQIHCWVVKNGVFLSDGH-------VQTGVLRIYVEDKLLFDARKV 174
Query: 105 FDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGP 164
FD +P D V W+ +++G++R G FK+M R + D+ ++TT L+AC
Sbjct: 175 FDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEML-VRGIEP--DEFSVTTALTACAQV 231
Query: 165 EFSSVSRMIHGLVFVGGF-EREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAV 223
+ + IH V + E ++ VG AL+ Y KCGC +VF+++ RNV +W A+
Sbjct: 232 GALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAAL 291
Query: 224 ISGLAQNELYEDGLRLFAQM-RGGSVSPNTLTYLSSLMACSGVQALAEGRK-IHGLLWKL 281
I G A + ++ R + P+++ L L AC+ L EGR + + +
Sbjct: 292 IGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARY 351
Query: 282 GMQSDLCIESALMDLYSKCGSLEGAWQIFE 311
G+ S ++DL + G L+ A + E
Sbjct: 352 GITPKHEHYSCIVDLMCRAGRLDDALDLIE 381
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 48/82 (58%), Gaps = 7/82 (8%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDA 101
+++ L+ C + G L G IH +K+ + D +FV +L+ MY+KCG ++ A
Sbjct: 221 VTTALTACAQVGALAQGKWIH-EFVKKKRWIESD------VFVGTALVDMYAKCGCIETA 273
Query: 102 IKLFDRMPVRDTVSWNSMISGF 123
+++F+++ R+ SW ++I G+
Sbjct: 274 VEVFEKLTRRNVFSWAALIGGY 295
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 202 bits (513), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 124/407 (30%), Positives = 207/407 (50%), Gaps = 17/407 (4%)
Query: 201 CFCQGRQVFDEMIERNVVTWTAVISGLAQNELYED---GLRLFAQM---RGGSVSPNTLT 254
C + ++ +V + +IS + N L+ Q+ R V PN T
Sbjct: 55 CLSYALSILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFT 114
Query: 255 YLSSLMACSGVQAL--AEGRKIHGLLWKL--GMQSDLCIESALMDLYSKCGSLEGAWQIF 310
Y SL SG A GR +H + K + D +++AL+ Y+ CG L A +F
Sbjct: 115 Y-PSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLF 173
Query: 311 ESAEELDGVSLTVILVAFAQN---GFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGT 367
E E D + +L A+A + +EE + +F R+ E+ ++V+ + +G
Sbjct: 174 ERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNEL--SLVALIKSCANLG- 230
Query: 368 SLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIA 427
G H ++K N + N FV LI++YSKCG L + +VF EM+Q++ +N++I
Sbjct: 231 EFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIR 290
Query: 428 AFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLS 487
A HG G ++ Y+ + G+ P TF+ + ACSH+GLV++G++ SM + +
Sbjct: 291 GLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIE 350
Query: 488 PRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQ 547
P+ EHY C+VD+LGR+G L+EA+ I+ +P +W++ LG+ HGD E G+ A
Sbjct: 351 PKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKH 410
Query: 548 LILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVS 594
L+ +S +VL++NIY+ +W + + MK+ V K G+S
Sbjct: 411 LLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGIS 457
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 192/420 (45%), Gaps = 32/420 (7%)
Query: 30 PATSESVLNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLL 89
P+TS+ NH L+ L+S C NL IHA+II + + + LL
Sbjct: 4 PSTSK---NHRCLN-LISKCKSLQNL---KQIHAQIIT--------IGLSHHTYPLSKLL 48
Query: 90 SMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDA---GFRFFKQMSESRTVY 146
+ S L A+ + ++P +N++IS + N + F + Q+ SR+ +
Sbjct: 49 HLSSTVC-LSYALSILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNF 107
Query: 147 SRFDKATLTTMLSACD-GPEFSSVSRMIHG--LVFVGGFEREITVGNALITSYFKCGCFC 203
R ++ T ++ A ++ R +H L F+ + V AL+ Y CG
Sbjct: 108 VRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLR 167
Query: 204 QGRQVFDEMIERNVVTWTAVISGLAQNELY---EDGLRLFAQMRGGSVSPNTLTYLSSLM 260
+ R +F+ + E ++ TW +++ A +E E+ L LF +M+ V PN L+ ++ +
Sbjct: 168 EARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQ---VRPNELSLVALIK 224
Query: 261 ACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVS 320
+C+ + G H + K + + + ++L+DLYSKCG L A ++F+ + D
Sbjct: 225 SCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSC 284
Query: 321 LTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLII 380
++ A +GF +E I+++ +++ G+ D+ + + G QI + +
Sbjct: 285 YNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFN-SM 343
Query: 381 KKNFSQNPFVSN--GLINMYSKCGELHDSLQVFYEMTQK-NSISWNSVIAAFARHGDGSR 437
K + P V + L+++ + G L ++ + +M K N+ W S + + HGD R
Sbjct: 344 KAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFER 403
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 200/414 (48%), Gaps = 34/414 (8%)
Query: 216 NVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSP-NTLTYLSSLMACSGVQALAEGRKI 274
+++ T +S A +E L LF QM P + + +L +C+ G +
Sbjct: 11 KLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSV 70
Query: 275 HGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFE 334
H K S+ + AL+D+Y KC S+ A ++F+ + + V ++ + G
Sbjct: 71 HAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKV 130
Query: 335 EEAIQIFTRIVTL----------------------GIEVDANMVS-----------AVLG 361
+EA++++ + + IE M+ A++
Sbjct: 131 KEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVS 190
Query: 362 VFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSIS 421
+ L K+IHS + +P + +GL+ Y +CG + VF M ++ ++
Sbjct: 191 ACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVA 250
Query: 422 WNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMT 481
W+S+I+A+A HGD AL+ ++EM + + P D+ FL++L ACSHAGL ++ + + M
Sbjct: 251 WSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQ 310
Query: 482 RDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMG 541
D+ L +HY+C+VD+L R G +EA I+ +PE W ALLGAC +G+ E+
Sbjct: 311 GDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELA 370
Query: 542 KFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSW 595
+ AA +L++ P + A +VL+ IY + G+ +E +MKE GV G SW
Sbjct: 371 EIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSW 424
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 167/349 (47%), Gaps = 39/349 (11%)
Query: 40 AHLSSL-LSVCGRDGNLHLGSSIHARIIKQP----PFFS-------------------FD 75
AH+ SL L C LG S+HA +K PF FD
Sbjct: 48 AHVFSLALKSCAAAFRPVLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFD 107
Query: 76 S-SRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVR-DTVSWNSMISGFLRNRDFD-AG 132
+RNA+ VWN+++S Y+ CG++++A++L++ M V + S+N++I G + D
Sbjct: 108 EIPQRNAV-VWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRA 166
Query: 133 FRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNAL 192
F+++M E R + + TL ++SAC + + IH F E + + L
Sbjct: 167 IEFYRKMIEFRF---KPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGL 223
Query: 193 ITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNT 252
+ +Y +CG + VFD M +R+VV W+++IS A + E L+ F +M V+P+
Sbjct: 224 VEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDD 283
Query: 253 LTYLSSLMACSGV----QALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQ 308
+ +L+ L ACS +AL +++ G G+++ S L+D+ S+ G E A++
Sbjct: 284 IAFLNVLKACSHAGLADEALVYFKRMQG---DYGLRASKDHYSCLVDVLSRVGRFEEAYK 340
Query: 309 IFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTR-IVTLGIEVDANMV 356
+ ++ E L+ +N E E +I R ++ + E AN V
Sbjct: 341 VIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPENPANYV 389
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 125/451 (27%), Positives = 214/451 (47%), Gaps = 38/451 (8%)
Query: 184 REITVGNALITSYFK--CGCFCQ---GRQVFDEMIERNVVTWTAVISGLAQNELYEDGLR 238
R G+ L+ ++F CG +VF + NV+ + A+I + + L
Sbjct: 29 RHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLS 88
Query: 239 LFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYS 298
F+ M+ + + TY L +CS + L G+ +HG L + G I +++LY+
Sbjct: 89 FFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYT 148
Query: 299 KCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEE----------------------- 335
G + A ++F+ E + V +++ F +G E
Sbjct: 149 SGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISS 208
Query: 336 --------EAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKN-FSQ 386
EA+++F ++ G + D V VL + L GK IHS F
Sbjct: 209 LSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKD 268
Query: 387 NPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEM- 445
V N L++ Y K G+L + +F +M ++N +SWN++I+ A +G G + ++ M
Sbjct: 269 FITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMI 328
Query: 446 RVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGL 505
G +AP + TFL +L CS+ G VE+G E M +L R+EHY +VD++ R+G
Sbjct: 329 EEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGR 388
Query: 506 LKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANI 565
+ EA F++ +P N +W +LL AC HGD ++ + AA +L+ P +S +VL++N+
Sbjct: 389 ITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNL 448
Query: 566 YSAEGKWKERAGAIKRMKEKGVAKEVGVSWI 596
Y+ EG+W++ MK+ + K G S I
Sbjct: 449 YAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 120/243 (49%), Gaps = 8/243 (3%)
Query: 74 FDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLR-NRDFDAG 132
FD + VWN ++ + G+++ + LF +M R VSWNSMIS + RD +A
Sbjct: 160 FDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREAL 219
Query: 133 FRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGG-FEREITVGNA 191
F + + + D+AT+ T+L + IH G F+ ITVGNA
Sbjct: 220 ELFCEMIDQGFDP----DEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNA 275
Query: 192 LITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLF-AQMRGGSVSP 250
L+ Y K G +F +M RNVV+W +ISG A N E G+ LF A + G V+P
Sbjct: 276 LVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAP 335
Query: 251 NTLTYLSSLMACSGVQALAEGRKIHGLLW-KLGMQSDLCIESALMDLYSKCGSLEGAWQI 309
N T+L L CS + G ++ GL+ + +++ A++DL S+ G + A++
Sbjct: 336 NEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKF 395
Query: 310 FES 312
++
Sbjct: 396 LKN 398
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 167/396 (42%), Gaps = 44/396 (11%)
Query: 79 RNALFVWNSLLSMY-SKCGELQD---AIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFR 134
R+ L N LL+ + S CG L + A ++F + + + +N+MI +
Sbjct: 29 RHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLS 88
Query: 135 FFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALIT 194
FF M +SR +++ D+ T +L +C + +HG + GF R + ++
Sbjct: 89 FFSSM-KSRGIWA--DEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVE 145
Query: 195 SYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSV------ 248
Y G ++VFDEM ERNVV W +I G + E GL LF QM S+
Sbjct: 146 LYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSM 205
Query: 249 -------------------------SPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGM 283
P+ T ++ L + + L G+ IH G+
Sbjct: 206 ISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGL 265
Query: 284 QSD-LCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFT 342
D + + +AL+D Y K G LE A IF + + VS ++ A NG E I +F
Sbjct: 266 FKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFD 325
Query: 343 RIVTLGIEVDANMVS--AVLGVFGVGTSLPLGKQIHSLIIKK-NFSQNPFVSNGLINMYS 399
++ G +V N + VL + G+++ L++++ ++++ S
Sbjct: 326 AMIEEG-KVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMS 384
Query: 400 KCGELHDSLQVFYEM-TQKNSISWNSVIAAFARHGD 434
+ G + ++ + M N+ W S+++A HGD
Sbjct: 385 RSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGD 420
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 193 bits (490), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 196/397 (49%), Gaps = 38/397 (9%)
Query: 238 RLFAQMRGGSVSPNTLTYLSSLMACSGVQA--LAEGRKIHGLLWKLGMQSDLCIESALMD 295
R F +MR SV P+ T+ AC+ + L + +H + G+ SDL + L+
Sbjct: 101 RFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIR 160
Query: 296 LYSKCGSLEGAWQIFESAEELDGVSLTVIL------------------------------ 325
+YS ++ A Q+F+ + D V+ V++
Sbjct: 161 VYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSL 220
Query: 326 -VAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNF 384
+AQ EAI++F +V LG++ D + + L GK IH +K
Sbjct: 221 ISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRL 280
Query: 385 SQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEE 444
+ F++ GL++ Y+KCG + ++++F + K +WN++I A HG+G + ++ +
Sbjct: 281 FIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRK 340
Query: 445 MRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAG 504
M GI P VTF+S+L CSH+GLV++ M + ++ +HY C+ D+LGRAG
Sbjct: 341 MVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAG 400
Query: 505 LLKEAKNFIEGLPENRG----VLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHV 560
L++EA IE +P++ G +L W LLG C IHG+ E+ + AA+++ +P +
Sbjct: 401 LIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYK 460
Query: 561 LMANIYSAEGKWKERAGAIKRM-KEKGVAKEVGVSWI 596
+M +Y+ +W+E + + ++K V K VG S +
Sbjct: 461 VMVEMYANAERWEEVVKVREIIDRDKKVKKNVGFSKV 497
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 114/244 (46%), Gaps = 14/244 (5%)
Query: 74 FDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGF 133
FD + + + +N L+ K E+ A +LFD MP+RD VSWNS+ISG+ +
Sbjct: 175 FDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAI 234
Query: 134 RFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGL-----VFVGGFEREITV 188
+ F +M + + D + + LSAC + IH +F+ F +
Sbjct: 235 KLFDEMV---ALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSF-----L 286
Query: 189 GNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSV 248
L+ Y KCG ++F+ ++ + TW A+I+GLA + E + F +M +
Sbjct: 287 ATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGI 346
Query: 249 SPNTLTYLSSLMACSGVQALAEGRKIHGLLWKL-GMQSDLCIESALMDLYSKCGSLEGAW 307
P+ +T++S L+ CS + E R + + L + ++ + DL + G +E A
Sbjct: 347 KPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAA 406
Query: 308 QIFE 311
++ E
Sbjct: 407 EMIE 410
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 94/180 (52%), Gaps = 1/180 (0%)
Query: 183 EREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQ 242
+R++ N LI K + R++FD M R++V+W ++ISG AQ + ++LF +
Sbjct: 180 QRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDE 239
Query: 243 MRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGS 302
M + P+ + +S+L AC+ +G+ IH + + D + + L+D Y+KCG
Sbjct: 240 MVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGF 299
Query: 303 LEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVD-ANMVSAVLG 361
++ A +IFE + + ++ A +G E + F ++V+ GI+ D +S ++G
Sbjct: 300 IDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVG 359
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 192 bits (488), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 127/437 (29%), Positives = 207/437 (47%), Gaps = 55/437 (12%)
Query: 190 NALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVS 249
NAL+ S +K C V++ +I + T Y+ L LF M V
Sbjct: 41 NALVASRWKTKC------VYNTLIRSYLTTGE-----------YKTSLALFTHMLASHVQ 83
Query: 250 PNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEG---- 305
PN LT+ S + A +++ G +HG K G D ++++ + Y + G LE
Sbjct: 84 PNNLTFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKM 143
Query: 306 ---------------------------AWQIFESAEELDGVSLTVILVAFAQNGFEEEAI 338
A++ F+ D VS T ++ F++ G +A+
Sbjct: 144 FDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKAL 203
Query: 339 QIFTRIVTLGIEV----DANMVSAV--LGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSN 392
+F ++ V +A VS + F G + LGKQIH ++ K +
Sbjct: 204 MVFGEMIQNERAVITPNEATFVSVLSSCANFDQG-GIRLGKQIHGYVMSKEIILTTTLGT 262
Query: 393 GLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAP 452
L++MY K G+L +L +F ++ K +WN++I+A A +G +AL+ +E M+ + P
Sbjct: 263 ALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHP 322
Query: 453 TDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNF 512
+T L++L AC+ + LV+ G++ S+ ++++ P SEHY CVVD++GRAGLL +A NF
Sbjct: 323 NGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANF 382
Query: 513 IEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKW 572
I+ LP V ALLGAC IH ++E+G QLI P +V ++ + + W
Sbjct: 383 IQSLPFEPDASVLGALLGACKIHENTELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNW 442
Query: 573 KERAGAIKRMKEKGVAK 589
E K M E G+ K
Sbjct: 443 SEAEKMRKAMIEAGIRK 459
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 127/282 (45%), Gaps = 25/282 (8%)
Query: 7 FNTHLPSWVDSLKSKAPISQYPFPATSESVLNHAHLSSLLSVCGRDGNLHLGSSIHARII 66
+NT + S++ + + K ++ + S N+ SL+ ++ G ++H + +
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 67 K---------QPPFFSF-------DSSRR-------NALFVWNSLLSMYSKCGELQDAIK 103
K Q F F +SSR+ + NSLL + GE+ A +
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 104 LFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDG 163
F RMPV D VSW ++I+GF + F +M ++ ++AT ++LS+C
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 164 PEFSSV--SRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWT 221
+ + + IHG V T+G AL+ Y K G +FD++ ++ V W
Sbjct: 234 FDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWN 293
Query: 222 AVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACS 263
A+IS LA N + L +F M+ V PN +T L+ L AC+
Sbjct: 294 AIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACA 335
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 179 bits (454), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 132/516 (25%), Positives = 238/516 (46%), Gaps = 37/516 (7%)
Query: 111 RDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVS 170
D+ SW ++ ++R F + M S S +T++L AC E
Sbjct: 67 HDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSH---AVTSVLRACGKMENMVDG 123
Query: 171 RMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQN 230
+ IH G + V L+ Y + G ++ FD++ E+N V+W +++ G ++
Sbjct: 124 KPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLES 183
Query: 231 ELYEDGLRLFAQM-RGGSVSPNTLTYLSSLM-------ACSGVQAL-------------- 268
++ R+F ++ +VS N + +SS ACS A+
Sbjct: 184 GELDEARRVFDKIPEKDAVSWNLI--ISSYAKKGDMGNACSLFSAMPLKSPASWNILIGG 241
Query: 269 ---AEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVIL 325
K+ + Q + ++ Y+K G ++ A ++F + D + ++
Sbjct: 242 YVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMI 301
Query: 326 VAFAQNGFEEEAIQIFTRIVTLG--IEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKN 383
+ QNG ++A+++F +++ I+ D +S+V+ + G + S I +
Sbjct: 302 ACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHG 361
Query: 384 FSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYE 443
+ +S LI++Y K G+ + ++F + +K+++S++++I +G + A +
Sbjct: 362 IKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFT 421
Query: 444 EMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRA 503
M I P VTF LL A SH+GLV++G + SM +DH L P ++HY +VDMLGRA
Sbjct: 422 AMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSM-KDHNLEPSADHYGIMVDMLGRA 480
Query: 504 GLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLIL--AAPASSAPHVL 561
G L+EA I+ +P VW ALL A +H + E G+ A + P H+
Sbjct: 481 GRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLA 540
Query: 562 MANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIE 597
M IYS+ G+W + +KEK + K +G SW+E
Sbjct: 541 M--IYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/453 (23%), Positives = 205/453 (45%), Gaps = 44/453 (9%)
Query: 5 RKFNTHLPSWVDSLKSKAPISQYPFPATSESVLNHAHLSSLLSVCGRDGNLHLGSSIHAR 64
RKF + ++D S P S +HA ++S+L CG+ N+ G IHA+
Sbjct: 83 RKFKETVDVYIDMHNSGIPPS------------SHA-VTSVLRACGKMENMVDGKPIHAQ 129
Query: 65 IIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFL 124
+K + ++V L+ +YS+ G ++ A K FD + ++TVSWNS++ G+L
Sbjct: 130 ALK--------NGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYL 181
Query: 125 RNRDFDAGFRFFKQMSESRTV---------YSRFDKATLTTMLSACDGPEFSSVSRMIHG 175
+ + D R F ++ E V + D ++ SA +S + +I G
Sbjct: 182 ESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGG 241
Query: 176 LVFVGGFEREITVGNA-----------LITSYFKCGCFCQGRQVFDEMIERNVVTWTAVI 224
V + T +A +I+ Y K G ++F M +++ + + A+I
Sbjct: 242 YVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMI 301
Query: 225 SGLAQNELYEDGLRLFAQM--RGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLG 282
+ QN +D L+LFAQM R + P+ +T S + A S + + G + + + G
Sbjct: 302 ACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHG 361
Query: 283 MQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFT 342
++ D + ++L+DLY K G A+++F + + D VS + +++ NG EA +FT
Sbjct: 362 IKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFT 421
Query: 343 RIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCG 402
++ I + + +L + + G + + + N + +++M + G
Sbjct: 422 AMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAG 481
Query: 403 ELHDSLQVFYEMT-QKNSISWNSVIAAFARHGD 434
L ++ ++ M Q N+ W +++ A H +
Sbjct: 482 RLEEAYELIKSMPMQPNAGVWGALLLASGLHNN 514
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/387 (31%), Positives = 194/387 (50%), Gaps = 26/387 (6%)
Query: 234 EDGLRLFAQMRGGS----VSPNTLTY-LSSLMACSGVQALAEGRKIHGLLWKLGM--QSD 286
ED +R+FA S ++ T + L + + AL GR +HG++ KLG +S+
Sbjct: 88 EDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSALRVGRIVHGMVKKLGFLYESE 147
Query: 287 LCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQ-----NGFEEEAIQIF 341
L I + L+ Y+K G L A ++F+ E V+ ++ + N +A+ +F
Sbjct: 148 L-IGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLF 206
Query: 342 TRIVTLGIEV---DANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQ--NPFVSNGLIN 396
R G V D MV + + G L +G +H I K F+ + F+ L++
Sbjct: 207 RRFSCCGSGVRPTDTTMVCVLSAISQTGL-LEIGSLVHGYIEKLGFTPEVDVFIGTALVD 265
Query: 397 MYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVT 456
MYSKCG L+++ VF M KN +W S+ A +G G+ M GI P ++T
Sbjct: 266 MYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEIT 325
Query: 457 FLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGL 516
F SLL A H GLVE+G+E SM ++P EHY C+VD+LG+AG ++EA FI +
Sbjct: 326 FTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAM 385
Query: 517 PENRGVLVWQALLGACSIHGDSEMGKFAADQLI-------LAAPASSAPHVLMANIYSAE 569
P ++ ++L ACSI+G++ MG+ L+ + + +V ++N+ + +
Sbjct: 386 PIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHK 445
Query: 570 GKWKERAGAIKRMKEKGVAKEVGVSWI 596
GKW E K MKE+ + G S++
Sbjct: 446 GKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 130/266 (48%), Gaps = 24/266 (9%)
Query: 55 LHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTV 114
L +G +H + K F ++S + +LL Y+K G+L+ A K+FD MP R +V
Sbjct: 127 LRVGRIVHGMVKKLG--FLYESE-----LIGTTLLHFYAKNGDLRYARKVFDEMPERTSV 179
Query: 115 SWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFD------KATLTTM---LSACDGPE 165
+WN+MI G+ ++D + ++ ++ RF + T TTM LSA
Sbjct: 180 TWNAMIGGYCSHKD-----KGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTG 234
Query: 166 FSSVSRMIHGLVFVGGFEREITV--GNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAV 223
+ ++HG + GF E+ V G AL+ Y KCGC VF+ M +NV TWT++
Sbjct: 235 LLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSM 294
Query: 224 ISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKI-HGLLWKLG 282
+GLA N + L +M + PN +T+ S L A + + EG ++ + + G
Sbjct: 295 ATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFG 354
Query: 283 MQSDLCIESALMDLYSKCGSLEGAWQ 308
+ + ++DL K G ++ A+Q
Sbjct: 355 VTPVIEHYGCIVDLLGKAGRIQEAYQ 380
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 127/406 (31%), Positives = 217/406 (53%), Gaps = 42/406 (10%)
Query: 232 LYEDGLRL-FAQMRGGSVSP-NTLTYLSSLMACSGVQ--ALAEGRKIHGLLWKLGMQSDL 287
LY+ RL F S+ P ++ TYL L A S + +L G +HGL KLG +S +
Sbjct: 99 LYDQLQRLHFLSDHNKSLPPFDSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFESHV 158
Query: 288 CIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNG-FEE----------- 335
+++AL+ +Y G++ A ++F+ E + V+ V++ G FE+
Sbjct: 159 YVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNR 218
Query: 336 -------------------EAIQIFTRIVTL-GIEVDANMVSAVL-GVFGVGTSLPLGKQ 374
EAI +F+R+V I+ + + A+L V+ +G L +
Sbjct: 219 TVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG-DLKMCGS 277
Query: 375 IHSLIIKKNFSQNPF-VSNGLINMYSKCGELHDSLQVFYEMT--QKNSISWNSVIAAFAR 431
+H+ + K+ F V+N LI+ Y+KCG + + + F E+ +KN +SW ++I+AFA
Sbjct: 278 VHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAI 337
Query: 432 HGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKG-MEFLVSMTRDHRLSPRS 490
HG G A+ +++M G+ P VT +S+L+ACSH GL E+ +EF +M +++++P
Sbjct: 338 HGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDV 397
Query: 491 EHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLIL 550
+HY C+VDML R G L+EA+ +P +VW+ LLGACS++ D+E+ + +L+
Sbjct: 398 KHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLME 457
Query: 551 AAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWI 596
+ +VLM+NI+ G++ + K+M +GVAK G S +
Sbjct: 458 LERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 129/264 (48%), Gaps = 38/264 (14%)
Query: 82 LFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSE 141
++V +L+ MY G + DA K+FD MP R+ V+WN MI+G DF+ F ++M
Sbjct: 158 VYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMP- 216
Query: 142 SRTV---------YSRFDKAT----LTTMLSACDGPEFSSVSRM---------------- 172
+RTV Y+R DK L + + ACD + + ++ +
Sbjct: 217 NRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCG 276
Query: 173 -IHGLVFVGGF-EREITVGNALITSYFKCGCFCQGRQVFDEMI--ERNVVTWTAVISGLA 228
+H V GF +I V N+LI +Y KCGC + F E+ +N+V+WT +IS A
Sbjct: 277 SVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFA 336
Query: 229 QNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKI---HGLLWKLGMQS 285
+ + ++ + +F M + PN +T +S L ACS LAE + + ++ + +
Sbjct: 337 IHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSH-GGLAEEEFLEFFNTMVNEYKITP 395
Query: 286 DLCIESALMDLYSKCGSLEGAWQI 309
D+ L+D+ + G LE A +I
Sbjct: 396 DVKHYGCLVDMLRRKGRLEEAEKI 419
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 105/469 (22%), Positives = 192/469 (40%), Gaps = 74/469 (15%)
Query: 15 VDSLKSKAPI---SQYPFPATSESVLNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPF 71
+ SL+S I S Y + ++ + H SL+ + NL + +H+
Sbjct: 9 ITSLRSYTIIKHSSCYSTLVSDGNIFSIQHFQSLMQ--KYESNLKIIHQLHSHFTTSGFL 66
Query: 72 FSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDA 131
LF++N LL YS A L+D+ L+ F
Sbjct: 67 LLHQKQNSGKLFLFNPLLRCYSLGETPLHAYFLYDQ----------------LQRLHF-- 108
Query: 132 GFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVG--GFEREITVG 189
+S+ FD T +L A P F S+ I GFE + V
Sbjct: 109 -------LSDHNKSLPPFDSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFESHVYVQ 161
Query: 190 NALITSYFKCGCFCQGRQVFDEMIERN-------------------------------VV 218
AL+ Y G +VFDEM ERN VV
Sbjct: 162 TALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVV 221
Query: 219 TWTAVISGLAQNELYEDGLRLFAQMRG-GSVSPNTLTYLSSLMACSGVQALAEGRKIHGL 277
+WT +I G A+ + ++ + LF++M ++ PN +T L+ L A + L +H
Sbjct: 222 SWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAY 281
Query: 278 LWKLG-MQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDG----VSLTVILVAFAQNG 332
+ K G + D+ + ++L+D Y+KCG ++ A++ F E +G VS T ++ AFA +G
Sbjct: 282 VGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFF--IEIPNGRKNLVSWTTMISAFAIHG 339
Query: 333 FEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVG--TSLPLGKQIHSLIIKKNFSQNPFV 390
+EA+ +F + LG++ + + +VL G + ++++ + + +
Sbjct: 340 MGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKH 399
Query: 391 SNGLINMYSKCGELHDSLQVFYEM-TQKNSISWNSVIAAFARHGDGSRA 438
L++M + G L ++ ++ E+ ++ ++ W ++ A + + D A
Sbjct: 400 YGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELA 448
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/451 (28%), Positives = 210/451 (46%), Gaps = 81/451 (17%)
Query: 83 FVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSES 142
+V N ++ MY K ++ A K+FD++ R WN MISG+ + + + + F M E+
Sbjct: 137 YVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPEN 196
Query: 143 RTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCF 202
D + T M++ GF + + NA
Sbjct: 197 -------DVVSWTVMIT---------------------GFAKVKDLENA----------- 217
Query: 203 CQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMAC 262
R+ FD M E++VV+W A++SG AQN ED LRLF M V PN T++ + AC
Sbjct: 218 ---RKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISAC 274
Query: 263 SG----------VQALAEGR------------KIHG----------LLWKLGMQSDLCIE 290
S V+ + E R +H + +LG Q +L
Sbjct: 275 SFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTW 334
Query: 291 SALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLG-I 349
+A++ Y++ G + A Q+F++ + + VS ++ +A NG AI+ F ++ G
Sbjct: 335 NAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDS 394
Query: 350 EVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQ 409
+ D + +VL G L LG I I K N LI MY++ G L ++ +
Sbjct: 395 KPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKR 454
Query: 410 VFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGL 469
VF EM +++ +S+N++ AFA +GDG L +M+ GI P VT+ S+L AC+ AGL
Sbjct: 455 VFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGL 514
Query: 470 VEKGMEFLVSMTRDHRLSPRSEHYACVVDML 500
+++G S+ +P ++HYAC +D+L
Sbjct: 515 LKEGQRIFKSIR-----NPLADHYAC-MDLL 539
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 158/339 (46%), Gaps = 36/339 (10%)
Query: 74 FDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGF 133
FD N + W +++ ++K +L++A K FDRMP + VSWN+M+SG+ +N +
Sbjct: 190 FDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDAL 249
Query: 134 RFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLV---------FVG---- 180
R F M + R ++ T ++SAC S++R + L+ FV
Sbjct: 250 RLFNDMLR---LGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALL 306
Query: 181 -------------------GFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWT 221
G +R + NA+I+ Y + G RQ+FD M +RNVV+W
Sbjct: 307 DMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWN 366
Query: 222 AVISGLAQNELYEDGLRLFAQMRG-GSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWK 280
++I+G A N + F M G P+ +T +S L AC + L G I + K
Sbjct: 367 SLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRK 426
Query: 281 LGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQI 340
++ + +L+ +Y++ G+L A ++F+ +E D VS + AFA NG E + +
Sbjct: 427 NQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNL 486
Query: 341 FTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLI 379
+++ GIE D ++VL L G++I I
Sbjct: 487 LSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSI 525
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/427 (23%), Positives = 174/427 (40%), Gaps = 102/427 (23%)
Query: 206 RQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGV 265
R +FD + NV ++ ++ ++ D LRL+ Q + P+ ++ + +
Sbjct: 60 RLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRF 119
Query: 266 QALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLE--------------------- 304
L L+ KLG D + + +MD+Y K S+E
Sbjct: 120 GIL-----FQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMI 174
Query: 305 -GAW---------QIFESAEELDGVSLTVILVAF-------------------------- 328
G W ++F+ E D VS TV++ F
Sbjct: 175 SGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNA 234
Query: 329 -----AQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKN 383
AQNGF E+A+++F ++ LG+ + V+ L + + LI +K
Sbjct: 235 MLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKR 294
Query: 384 FSQNPFVSNGLINMYSKC--------------------------------GELHDSLQVF 411
N FV L++M++KC G++ + Q+F
Sbjct: 295 VRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLF 354
Query: 412 YEMTQKNSISWNSVIAAFARHGDGSRALQFYEEM-RVGGIAPTDVTFLSLLHACSHAGLV 470
M ++N +SWNS+IA +A +G + A++F+E+M G P +VT +S+L AC H +
Sbjct: 355 DTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADL 414
Query: 471 EKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLG 530
E G + +V R +++ Y ++ M R G L EAK + + E R V+ + L
Sbjct: 415 ELG-DCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKE-RDVVSYNTLFT 472
Query: 531 ACSIHGD 537
A + +GD
Sbjct: 473 AFAANGD 479
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 116/220 (52%), Gaps = 8/220 (3%)
Query: 77 SRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFF 136
++RN L WN+++S Y++ G++ A +LFD MP R+ VSWNS+I+G+ N FF
Sbjct: 327 TQRN-LVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFF 385
Query: 137 KQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSY 196
+ M + S+ D+ T+ ++LSAC + I + + + +LI Y
Sbjct: 386 EDMIDYGD--SKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMY 443
Query: 197 FKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYL 256
+ G + ++VFDEM ER+VV++ + + A N + L L ++M+ + P+ +TY
Sbjct: 444 ARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYT 503
Query: 257 SSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDL 296
S L AC+ L EG++I +++ L A MDL
Sbjct: 504 SVLTACNRAGLLKEGQRIFK-----SIRNPLADHYACMDL 538
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/418 (25%), Positives = 197/418 (47%), Gaps = 38/418 (9%)
Query: 240 FAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSK 299
F +R G V P++ T++S + + G+ HG K G L ++++LM +Y+
Sbjct: 107 FDILRFGFV-PDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTC 165
Query: 300 CGSLEGAWQIFESAEELDGVSLTVILVAFAQNG--------FEEE--------------- 336
CG+L+ A ++F + D VS I+ +NG F+E
Sbjct: 166 CGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAY 225
Query: 337 --------AIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNP 388
+I +F +V G + + + + +L G L G+ +H+ +I+ + +
Sbjct: 226 LGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSV 285
Query: 389 FVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVG 448
+ LI+MY KC E+ + ++F ++ +N ++WN +I A HG L+ +E M G
Sbjct: 286 VIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMING 345
Query: 449 GIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKE 508
+ P +VTF+ +L C+ AGLV +G + M + ++ P H C+ ++ AG +E
Sbjct: 346 MLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEE 405
Query: 509 AKNFIEGLPENRGV---LVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANI 565
A+ ++ LP+ W LL + G+ +G+ A LI P + + L+ NI
Sbjct: 406 AEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNI 465
Query: 566 YSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELS 623
YS G+W++ + +KE+ + + G +++ + V +G K +A+ +F E S
Sbjct: 466 YSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVHGLRLGCK---EAEKVFTETS 520
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 121/265 (45%), Gaps = 29/265 (10%)
Query: 82 LFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSE 141
L V NSL+ MY+ CG L A KLF +P RD VSWNS+I+G +RN D A + F +M +
Sbjct: 153 LPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPD 212
Query: 142 SRTV------------------YSRF----------DKATLTTMLSACDGPEFSSVSRMI 173
+ S F +++TL +L+AC R +
Sbjct: 213 KNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSV 272
Query: 174 HGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELY 233
H + + + ALI Y KC R++FD + RN VTW +I +
Sbjct: 273 HASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRP 332
Query: 234 EDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLW-KLGMQSDLCIESA 292
E GL LF M G + P+ +T++ L C+ +++G+ + L+ + ++ + +
Sbjct: 333 EGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWC 392
Query: 293 LMDLYSKCGSLEGAWQIFESAEELD 317
+ +LYS G E A + ++ + D
Sbjct: 393 MANLYSSAGFPEEAEEALKNLPDED 417
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 128/289 (44%), Gaps = 40/289 (13%)
Query: 150 DKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVF 209
D T +++S + +M HG G ++ + V N+L+ Y CG +++F
Sbjct: 117 DSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLF 176
Query: 210 DEMIERNVVTWTAVISGLAQN-------ELYED------------------------GLR 238
E+ +R++V+W ++I+G+ +N +L+++ +
Sbjct: 177 VEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSIS 236
Query: 239 LFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYS 298
LF +M N T + L AC L EGR +H L + + S + I++AL+D+Y
Sbjct: 237 LFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYG 296
Query: 299 KCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSA 358
KC + A +IF+S + V+ V+++A +G E +++F ++ + D
Sbjct: 297 KCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVG 356
Query: 359 VLGVFGVGTSLPLGKQIHSLI-----IKKNFSQNPFVSNGLINMYSKCG 402
VL + G+ +SL+ IK NF ++ N+YS G
Sbjct: 357 VLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMA----NLYSSAG 401
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 102/249 (40%), Gaps = 33/249 (13%)
Query: 324 ILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKN 383
+ A+ + ++A+ + I+ G D+ +++ + GK H IK
Sbjct: 89 VFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHG 148
Query: 384 FSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRA----- 438
Q V N L++MY+ CG L + ++F E+ +++ +SWNS+IA R+GD A
Sbjct: 149 CDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFD 208
Query: 439 --------------------------LQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEK 472
+ + EM G + T + LL+AC + +++
Sbjct: 209 EMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKE 268
Query: 473 GMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGAC 532
G S+ R L+ ++DM G+ + A+ + L R + W ++ A
Sbjct: 269 GRSVHASLIRTF-LNSSVVIDTALIDMYGKCKEVGLARRIFDSL-SIRNKVTWNVMILAH 326
Query: 533 SIHGDSEMG 541
+HG E G
Sbjct: 327 CLHGRPEGG 335
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 11/124 (8%)
Query: 38 NHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGE 97
N + L LL+ CGR L G S+HA +I+ +F +S ++ + +L+ MY KC E
Sbjct: 249 NESTLVLLLNACGRSARLKEGRSVHASLIR-----TFLNS---SVVIDTALIDMYGKCKE 300
Query: 98 LQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTM 157
+ A ++FD + +R+ V+WN MI + + G F+ M R D+ T +
Sbjct: 301 VGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGML---RPDEVTFVGV 357
Query: 158 LSAC 161
L C
Sbjct: 358 LCGC 361
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 166/342 (48%), Gaps = 33/342 (9%)
Query: 208 VFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSP-NTLTYLSSLMACSGVQ 266
VF+++ + TW +I L+ N + L LF M S + T+ + AC
Sbjct: 74 VFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASS 133
Query: 267 ALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFE--------------- 311
++ G ++HGL K G +D+ ++ LMDLY KCG + ++F+
Sbjct: 134 SIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLY 193
Query: 312 ---SAEELDG-------------VSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANM 355
S +LD VS T ++ A+ +N +EA Q+F R+ ++ +
Sbjct: 194 GLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFT 253
Query: 356 VSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMT 415
+ +L SL +G+ +H K F + F+ LI+MYSKCG L D+ +VF M
Sbjct: 254 IVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQ 313
Query: 416 QKNSISWNSVIAAFARHGDGSRALQ-FYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGM 474
K+ +WNS+I + HG G AL F E + P +TF+ +L AC++ G V+ G+
Sbjct: 314 GKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGL 373
Query: 475 EFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGL 516
+ M + + +SP EH AC++ +L +A +++A N +E +
Sbjct: 374 RYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESM 415
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 153/350 (43%), Gaps = 45/350 (12%)
Query: 43 SSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAI 102
S L C L IH +IIK + N + L+S+ S GE Q A
Sbjct: 24 SYFLRTCSNFSQL---KQIHTKIIKH--------NLTNDQLLVRQLISVSSSFGETQYAS 72
Query: 103 KLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACD 162
+F+++ T +WN MI N F M S S+FDK T ++ AC
Sbjct: 73 LVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQ--SQFDKFTFPFVIKACL 130
Query: 163 GPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFD------------ 210
+ +HGL GF ++ N L+ YFKCG GR+VFD
Sbjct: 131 ASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTT 190
Query: 211 -------------------EMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPN 251
+M RNVV+WTA+I+ +N ++ +LF +M+ V PN
Sbjct: 191 MLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPN 250
Query: 252 TLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFE 311
T ++ L A + + +L+ GR +H K G D + +AL+D+YSKCGSL+ A ++F+
Sbjct: 251 EFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFD 310
Query: 312 SAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLG-IEVDANMVSAVL 360
+ + ++ + +G EEA+ +F + +E DA VL
Sbjct: 311 VMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVL 360
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/313 (20%), Positives = 132/313 (42%), Gaps = 37/313 (11%)
Query: 259 LMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDG 318
L CS L ++IH + K + +D + L+ + S G + A +F +
Sbjct: 27 LRTCSNFSQL---KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPST 83
Query: 319 VSLTVILVAFAQNGFEEEAIQIFT-RIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHS 377
+ +++ + + N EA+ +F +++ + D V+ +S+ LG Q+H
Sbjct: 84 FTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHG 143
Query: 378 LIIKKNFSQNPFVSNGLINMYSKCG-------------------------------ELHD 406
L IK F + F N L+++Y KCG +L
Sbjct: 144 LAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDS 203
Query: 407 SLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSH 466
+ VF +M +N +SW ++I A+ ++ A Q + M+V + P + T ++LL A +
Sbjct: 204 AEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQ 263
Query: 467 AGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQ 526
G + G ++ + ++DM + G L++A+ + + + + + W
Sbjct: 264 LGSLSMG-RWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVM-QGKSLATWN 321
Query: 527 ALLGACSIHGDSE 539
+++ + +HG E
Sbjct: 322 SMITSLGVHGCGE 334
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 157/326 (48%), Gaps = 13/326 (3%)
Query: 327 AFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQ 386
AF ++G ++A+ + ++ VD + + + + G L K +H I + S
Sbjct: 228 AFCKHGKVKKALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKI-SASVSH 286
Query: 387 NPFVSNG-LINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEM 445
SN L+ MYS CG +++ VF +M++KN +W +I FA++G G A+ +
Sbjct: 287 LDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRF 346
Query: 446 RVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGL 505
+ G P F + +AC G V++G+ SM+RD+ ++P E Y +V+M G
Sbjct: 347 KEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGF 406
Query: 506 LKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANI 565
L EA F+E +P V VW+ L+ +HG+ E+G + A+ + P N
Sbjct: 407 LDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTR-------LNK 459
Query: 566 YSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRL 625
S EG +A +++ + + K G+ + + F GD P+ D +F L L
Sbjct: 460 QSREGFIPVKASDVEK---ESLKKRSGI-LHGVKSSMQEFRAGDTNLPENDELFQLLRNL 515
Query: 626 LKHLKDEGYVPDKRCILYYLDQDKKD 651
H+ + GYV + R L+ +DQ+ K+
Sbjct: 516 KMHMVEVGYVAETRMALHDIDQESKE 541
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 89/193 (46%), Gaps = 8/193 (4%)
Query: 249 SPNTLTYLSSLMA----CSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLE 304
S N + LS L+ C + L E + +HG + DL L+++YS CG
Sbjct: 247 SMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLAN 306
Query: 305 GAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFG 364
A +FE E + + +I+ FA+NGF E+AI +F+R G D + + G
Sbjct: 307 EAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACG 366
Query: 365 VGTSLPLGKQIHSLIIKKNFSQNPFVSN--GLINMYSKCGELHDSLQVFYEMTQKNSIS- 421
+ + G +H + +++ P + + L+ MY+ G L ++L+ M + ++
Sbjct: 367 MLGDVDEG-LLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDV 425
Query: 422 WNSVIAAFARHGD 434
W +++ HG+
Sbjct: 426 WETLMNLSRVHGN 438
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 73/168 (43%), Gaps = 11/168 (6%)
Query: 150 DKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVF 209
D + L + C E ++ +HG + +++ + L+ Y CG + VF
Sbjct: 253 DLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVF 312
Query: 210 DEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALA 269
++M E+N+ TW +I A+N ED + +F++ + P+ + AC + +
Sbjct: 313 EKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVD 372
Query: 270 EGRKIHGLLWKLGMQSDLCIES------ALMDLYSKCGSLEGAWQIFE 311
E GLL M D I +L+++Y+ G L+ A + E
Sbjct: 373 E-----GLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVE 415
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 140/309 (45%), Gaps = 19/309 (6%)
Query: 336 EAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLI 395
EA+++ + G +D + + + G +L + +H II + N +I
Sbjct: 102 EAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGARNAII 161
Query: 396 NMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDV 455
MYS C + D+L+VF EM + NS + ++ F +G G A+ + + G P
Sbjct: 162 EMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGE 221
Query: 456 TFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEG 515
F + C+ G V++G +M R++ + P EHY V ML +G L EA NF+E
Sbjct: 222 IFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVER 281
Query: 516 LPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKER 575
+P V VW+ L+ +HGD E+G A +L+ A+ V A + + +
Sbjct: 282 MPMEPSVDVWETLMNLSRVHGDVELGDRCA-ELVEKLDATRLDKVSSAGLVATKA----- 335
Query: 576 AGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDEGYV 635
+ +K KE E S+F D HPQ +II+ L L LK+ GYV
Sbjct: 336 SDFVK--KEPSTRSEPYF--------YSTFRPVDSSHPQMNIIYETLMSLRSQLKEMGYV 385
Query: 636 PDKRCILYY 644
PD R YY
Sbjct: 386 PDTR---YY 391
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 105/238 (44%), Gaps = 22/238 (9%)
Query: 262 CSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSL 321
C +AL R +H + L D+ +A++++YS C S++ A ++FE E + +L
Sbjct: 129 CGKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTL 188
Query: 322 TVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGK-QIHSLII 380
V++ F NG+ EEAI +FTR G + + + + V + + G Q ++
Sbjct: 189 CVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYR 248
Query: 381 KKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSIS-WNSVIAAFARHGD---GS 436
+ + + + M + G L ++L M + S+ W +++ HGD G
Sbjct: 249 EYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGD 308
Query: 437 RALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLV-EKGMEFLVSMTRDHRLSPRSEHY 493
R + E++ D T L + S AGLV K +F+ S RSE Y
Sbjct: 309 RCAELVEKL--------DATRLDKV---SSAGLVATKASDFV-----KKEPSTRSEPY 350
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 107/189 (56%)
Query: 368 SLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIA 427
SL K++H ++ F +P ++N +I+M+ +C + D+ +VF M K+ SW+ ++
Sbjct: 251 SLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMC 310
Query: 428 AFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLS 487
A++ +G G AL +EEM G+ P + TFL++ AC+ G +E+ SM +H +S
Sbjct: 311 AYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGIS 370
Query: 488 PRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQ 547
P++EHY V+ +LG+ G L EA+ +I LP W+A+ +HGD ++ + +
Sbjct: 371 PKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEEL 430
Query: 548 LILAAPASS 556
++ P+ +
Sbjct: 431 MVDVDPSKA 439
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 59/122 (48%)
Query: 150 DKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVF 209
D+ + +C + S+ +H F + + N +I+ + +C ++VF
Sbjct: 235 DRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVF 294
Query: 210 DEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALA 269
D M+++++ +W ++ + N + +D L LF +M + PN T+L+ +AC+ V +
Sbjct: 295 DHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIE 354
Query: 270 EG 271
E
Sbjct: 355 EA 356
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/215 (19%), Positives = 99/215 (46%), Gaps = 16/215 (7%)
Query: 227 LAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSD 286
L Q LY+D + L + P+ ++ +C+ +++L +K+H + + D
Sbjct: 215 LCQRRLYKDAIELLDK----GAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGD 270
Query: 287 LCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVT 346
+ + ++ ++ +C S+ A ++F+ + D S +++ A++ NG ++A+ +F +
Sbjct: 271 PKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTK 330
Query: 347 LGIEVDANMVSAVL----GVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSN--GLINMYSK 400
G++ + V V G+ + +H +K +P + G++ + K
Sbjct: 331 HGLKPNEETFLTVFLACATVGGIEEAF-----LHFDSMKNEHGISPKTEHYLGVLGVLGK 385
Query: 401 CGELHDSLQVFYEMTQKNSISWNSVIAAFAR-HGD 434
CG L ++ Q ++ + + + + +AR HGD
Sbjct: 386 CGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHGD 420
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/480 (22%), Positives = 213/480 (44%), Gaps = 76/480 (15%)
Query: 81 ALFVWNSLLSMYSKCGELQDAIKLFDRMPVR----DTVSWNSMISGFLRNRDFDAGFRFF 136
++ +NSL+S Y++ G L +A++L ++M + D ++ +++SGF R ++ F
Sbjct: 348 SIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIF 407
Query: 137 KQMSESRT-----VYSRF-----DKATLTTMLSACD-------GPEFSSVSRMI-----H 174
++M + ++ F ++ T M+ D P+ + + ++ +
Sbjct: 408 EEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQN 467
Query: 175 GL------VFV----GGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVV----TW 220
G+ VF GF E N LI++Y +CG F Q V+ M++ V T+
Sbjct: 468 GMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTY 527
Query: 221 TAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWK 280
V++ LA+ ++E ++ A+M G PN LTY CS + A A G++I GL+
Sbjct: 528 NTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTY------CSLLHAYANGKEI-GLMHS 580
Query: 281 LGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQI 340
L A +++ E V L +++ ++ EA +
Sbjct: 581 L------------------------AEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERA 616
Query: 341 FTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSK 400
F+ + G D +++++ ++G + + + ++ F+ + N L+ M+S+
Sbjct: 617 FSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSR 676
Query: 401 CGELHDSLQVFYEMTQK----NSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVT 456
+ S ++ E+ K + IS+N+VI A+ R+ A + + EMR GI P +T
Sbjct: 677 SADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVIT 736
Query: 457 FLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGL 516
+ + + + + + E+ + + M + H P Y +VD + EAK F+E L
Sbjct: 737 YNTFIGSYAADSMFEEAIGVVRYMIK-HGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 88/473 (18%), Positives = 185/473 (39%), Gaps = 55/473 (11%)
Query: 209 FDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQAL 268
+ M++ +VV +IS L + +F ++ S + +Y S + A +
Sbjct: 167 YQSMLDNSVVA--IIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRY 224
Query: 269 AEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEE--------LDGVS 320
E + + + G + L + +++++ K G+ W S E D +
Sbjct: 225 REAVNVFKKMEEDGCKPTLITYNVILNVFGKMGT---PWNKITSLVEKMKSDGIAPDAYT 281
Query: 321 LTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLII 380
++ + +EA Q+F + G D +A+L V+G ++ + ++
Sbjct: 282 YNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMV 341
Query: 381 KKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNS----ISWNSVIAAFARHGDGS 436
FS + N LI+ Y++ G L +++++ +M +K + ++ ++++ F R G
Sbjct: 342 LNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVE 401
Query: 437 RALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACV 496
A+ +EEMR G P TF + + + G + M+ + LSP + +
Sbjct: 402 SAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINV-CGLSPDIVTWNTL 460
Query: 497 VDMLGRAGLLKEAKNFIEGL------PENRGVLVWQALLGACSIHGDSEMGKFAADQLIL 550
+ + G+ G+ E + + PE + L+ A S G E +++
Sbjct: 461 LAVFGQNGMDSEVSGVFKEMKRAGFVPERE---TFNTLISAYSRCGSFEQAMTVYRRMLD 517
Query: 551 A--APASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSW------------I 596
A P S + ++A + G W++ + M E G K +++ I
Sbjct: 518 AGVTPDLSTYNTVLAALARG-GMWEQSEKVLAEM-EDGRCKPNELTYCSLLHAYANGKEI 575
Query: 597 EIDKQVSSFVVGDKLHPQADI------------IFLELSRLLKHLKDEGYVPD 637
+ ++ V + P+A + + E R LK+ G+ PD
Sbjct: 576 GLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPD 628
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 156/370 (42%), Gaps = 69/370 (18%)
Query: 286 DLCIESALMDLYSKCGSLEGAWQIFESAEE----LDGVSLTVILVAFAQNGFEEEAIQIF 341
D + + ++ + K G + A +F +E LD S T ++ AFA +G EA+ +F
Sbjct: 172 DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVF 231
Query: 342 TRIVTLGIEVDANMVSAVLGVFG-VGTSLPLGKQIHSLIIK---KNFSQNPFVSNGLINM 397
++ G + + +L VFG +GT P K I SL+ K + + + N LI
Sbjct: 232 KKMEEDGCKPTLITYNVILNVFGKMGT--PWNK-ITSLVEKMKSDGIAPDAYTYNTLITC 288
Query: 398 YSKCGELH-DSLQVFYEMTQK----NSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAP 452
K G LH ++ QVF EM + +++N+++ + + A++ EM + G +P
Sbjct: 289 -CKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSP 347
Query: 453 TDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNF 512
+ VT+ SL+ A + G++++ ME M + P Y ++ RAG ++ A +
Sbjct: 348 SIVTYNSLISAYARDGMLDEAMELKNQMA-EKGTKPDVFTYTTLLSGFERAGKVESAMSI 406
Query: 513 IEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMAN----IYSA 568
E EM A P++ N +Y
Sbjct: 407 FE------------------------EMRN-----------AGCKPNICTFNAFIKMYGN 431
Query: 569 EGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKH 628
GK+ E + G++ ++ V+W + V G + + E+S + K
Sbjct: 432 RGKFTEMMKIFDEINVCGLSPDI-VTWNTLLA-----VFGQ------NGMDSEVSGVFKE 479
Query: 629 LKDEGYVPDK 638
+K G+VP++
Sbjct: 480 MKRAGFVPER 489
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 149/329 (45%), Gaps = 20/329 (6%)
Query: 325 LVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNF 384
L + + G ++A++I G VD + + + G +L K +H I
Sbjct: 153 LDSICREGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVG 212
Query: 385 SQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEE 444
+ N +I MYS CG + D+L VF M ++N +W VI FA++G G A+ +
Sbjct: 213 ISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSR 272
Query: 445 MRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAG 504
+ G P F + AC G + +G+ SM +++ + P EHY +V ML G
Sbjct: 273 FKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPG 332
Query: 505 LLKEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQLILAAPASSAPHVLMAN 564
L EA F+E + N V +W+ L+ +HGD +G D ++ AS N
Sbjct: 333 YLDEALRFVESMEPN--VDLWETLMNLSRVHGDLILGDRCQD-MVEQLDASR------LN 383
Query: 565 IYSAEGKWKERAGAIKRMKEKGVAK--EVGVSWIEIDKQVSSFVVGDKLHPQADIIFLEL 622
S G ++ + + K + +AK G+ ++ GD P+ +++ L
Sbjct: 384 KESKAGLVPVKSSDLVKEKLQRMAKGPNYGIRYM---------AAGDISRPENRELYMAL 434
Query: 623 SRLLKHLKDEGYVPDKRCILYYLDQDKKD 651
L +H+ + GYVP + L+ +DQ+ KD
Sbjct: 435 KSLKEHMIEIGYVPLSKLALHDVDQESKD 463
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 18/214 (8%)
Query: 262 CSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSL 321
C QAL E + +H + SD+ ++++++YS CGS+E A +F S E + +
Sbjct: 191 CGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETW 250
Query: 322 TVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIK 381
++ FA+NG E+AI F+R G + D M + GV + G +H +
Sbjct: 251 CGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEG-LLHFESMY 309
Query: 382 KNFSQNPFVSN--GLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGD---GS 436
K + P + + L+ M ++ G L ++L+ F E + N W +++ HGD G
Sbjct: 310 KEYGIIPCMEHYVSLVKMLAEPGYLDEALR-FVESMEPNVDLWETLMNLSRVHGDLILGD 368
Query: 437 RALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLV 470
R E++ S L+ S AGLV
Sbjct: 369 RCQDMVEQLDA-----------SRLNKESKAGLV 391
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 177/365 (48%), Gaps = 22/365 (6%)
Query: 168 SVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIER----NVVTWTAV 223
++++ I F GG+ + +ALI++Y + G + VF+ M E N+VT+ AV
Sbjct: 250 TIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAV 309
Query: 224 ISGLAQNEL-YEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLG 282
I + + ++ + F +M+ V P+ +T+ S L CS R + +
Sbjct: 310 IDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRR 369
Query: 283 MQSDLCIESALMDLYSKCGSLEGAWQIFESAE----ELDGVSLTVILVAFAQNGFEEEAI 338
++ D+ + L+D K G ++ A++I + VS + ++ FA+ G +EA+
Sbjct: 370 IEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEAL 429
Query: 339 QIFTRIVTLGIEVDANMVSAVLGVF-GVGTS---LPLGKQIHSLIIKKNFSQNPFVSNGL 394
+F + LGI +D + +L ++ VG S L + +++ S+ IKK+ N L
Sbjct: 430 NLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDV----VTYNAL 485
Query: 395 INMYSKCGELHDSLQVFYEMTQK----NSISWNSVIAAFARHGDGSRALQFYEEMRVGGI 450
+ Y K G+ + +VF EM ++ N ++++++I +++ G A++ + E + G+
Sbjct: 486 LGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGL 545
Query: 451 APTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAK 510
V + +L+ A GLV + + MT++ +SP Y ++D GR+ + +
Sbjct: 546 RADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG-ISPNVVTYNSIIDAFGRSATMDRSA 604
Query: 511 NFIEG 515
++ G
Sbjct: 605 DYSNG 609
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 102/474 (21%), Positives = 206/474 (43%), Gaps = 63/474 (13%)
Query: 43 SSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAI 102
S+++S GR G + +I RI + +F N ++ +++L+S Y + G ++AI
Sbjct: 237 SAMISTLGRYGKV----TIAKRIFET----AFAGGYGNTVYAFSALISAYGRSGLHEEAI 288
Query: 103 KLFDRMP----VRDTVSWNSMISGFLRN-RDFDAGFRFFKQMSESRTVYSRFDKATLTTM 157
+F+ M + V++N++I + +F +FF +M + + D+ T ++
Sbjct: 289 SVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGV---QPDRITFNSL 345
Query: 158 LSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEM----I 213
L+ C +R + + E+++ N L+ + K G ++ +M I
Sbjct: 346 LAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRI 405
Query: 214 ERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRK 273
NVV+++ VI G A+ +++ L LF +MR ++ + ++Y + L + V E
Sbjct: 406 MPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALD 465
Query: 274 IHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEE----LDGVSLTVILVAFA 329
I + +G++ D+ +AL+ Y K G + ++F + + ++ + ++ ++
Sbjct: 466 ILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYS 525
Query: 330 QNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFG----VGTSLPLGKQIHSLIIKKNFS 385
+ G +EA++IF + G+ D + SA++ VG+++ L ++ K+ S
Sbjct: 526 KGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEM----TKEGIS 581
Query: 386 QNPFVSNGLINM------------YSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHG 433
N N +I+ YS G L S +T+ N VI F +
Sbjct: 582 PNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEG---NRVIQLFGQLT 638
Query: 434 DGSRA----------------LQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVE 471
S L+ + +M I P VTF ++L+ACS E
Sbjct: 639 TESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFE 692
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/363 (21%), Positives = 151/363 (41%), Gaps = 48/363 (13%)
Query: 188 VGNALITSYFKCGCFCQGRQVFDEMIE----RNVVTWTAVISGLAQNELYEDGLRLFAQM 243
+ +A+I++ + G +++F+ V ++A+IS ++ L+E+ + +F M
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 244 RGGSVSPNTLTYLSSLMAC-SGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGS 302
+ + PN +TY + + AC G + K + + G+Q D
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDR--------------- 339
Query: 303 LEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGV 362
++ +L ++ G E A +F + IE D + +L
Sbjct: 340 ----------------ITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDA 383
Query: 363 FGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEM----TQKN 418
G + L +I + + K N + +I+ ++K G ++L +F EM +
Sbjct: 384 ICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALD 443
Query: 419 SISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLV 478
+S+N++++ + + G AL EM GI VT+ +LL G ++ +
Sbjct: 444 RVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFT 503
Query: 479 SMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIE-----GLPENRGVLVWQALLGACS 533
M R+H L P Y+ ++D + GL KEA GL + V+++ AL+ A
Sbjct: 504 EMKREHVL-PNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRAD--VVLYSALIDALC 560
Query: 534 IHG 536
+G
Sbjct: 561 KNG 563
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 118/271 (43%), Gaps = 19/271 (7%)
Query: 332 GFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVS 391
GF E A++ R G + SA++ G + + K+I + +
Sbjct: 217 GFYEFAVKRERRKNEQG-----KLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAF 271
Query: 392 NGLINMYSKCGELHDSLQVFYEMTQ----KNSISWNSVIAAFARHG-DGSRALQFYEEMR 446
+ LI+ Y + G +++ VF M + N +++N+VI A + G + + +F++EM+
Sbjct: 272 SALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQ 331
Query: 447 VGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLL 506
G+ P +TF SLL CS GL E MT + R+ Y ++D + + G +
Sbjct: 332 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMT-NRRIEQDVFSYNTLLDAICKGGQM 390
Query: 507 KEAKNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFA------ADQLILAAPASSAPHV 560
A + +P R ++ + + I G ++ G+F + L +
Sbjct: 391 DLAFEILAQMPVKR--IMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYN 448
Query: 561 LMANIYSAEGKWKERAGAIKRMKEKGVAKEV 591
+ +IY+ G+ +E ++ M G+ K+V
Sbjct: 449 TLLSIYTKVGRSEEALDILREMASVGIKKDV 479
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 150/389 (38%), Gaps = 124/389 (31%)
Query: 42 LSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRR--NALFVWNSLLSMYSKCGELQ 99
+SLL+VC R G ++ F ++RR +F +N+LL K G++
Sbjct: 342 FNSLLAVCSRGGLWEAARNL----------FDEMTNRRIEQDVFSYNTLLDAICKGGQMD 391
Query: 100 DAIKLFDRMPVR----DTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLT 155
A ++ +MPV+ + VS++++I GF + FD F +M R + D+ +
Sbjct: 392 LAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEM---RYLGIALDRVSYN 448
Query: 156 TMLSACDGPEFSSVSRMIHGLVFVG-----GFEREITVGNALITSYFKCGCFCQGRQVFD 210
T+LS ++ V R L + G ++++ NAL+ Y K G + + ++VF
Sbjct: 449 TLLSI-----YTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFT 503
Query: 211 EM----IERNVVTWTAVISGLAQNELYED-----------GLR----------------- 238
EM + N++T++ +I G ++ LY++ GLR
Sbjct: 504 EMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNG 563
Query: 239 -------LFAQMRGGSVSPNTLTYLSSLMA----------------------CSGVQALA 269
L +M +SPN +TY S + A S + AL
Sbjct: 564 LVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALT 623
Query: 270 E--GRKIHGLLWKL--------------GMQSDLCIE------------------SALMD 295
E G ++ L +L GMQ CI SA+++
Sbjct: 624 ETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILN 683
Query: 296 LYSKCGSLEGAWQIFESAEELDGVSLTVI 324
S+C S E A + E D V+
Sbjct: 684 ACSRCNSFEDASMLLEELRLFDNKVYGVV 712
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 136/287 (47%), Gaps = 5/287 (1%)
Query: 76 SSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDF-DAGFR 134
SS R + N LL M+ CG L ++FDRMP RD SW + G + D+ DA F
Sbjct: 117 SSIRPTITFINRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFL 176
Query: 135 FFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGF--EREITVGNAL 192
F + S+ + L +L AC + + +H L GF E + + +L
Sbjct: 177 FVSMLKHSQKGAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSL 236
Query: 193 ITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNT 252
I Y + C V ++ N V W A ++ + +++ +R F +M + N
Sbjct: 237 IRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNV 296
Query: 253 LTYLSSLMACSGV-QALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFE 311
+ + L ACS V G+++H KLG +SD I L+++Y K G ++ A ++F+
Sbjct: 297 SVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFK 356
Query: 312 SAEELDGVSLTVILVA-FAQNGFEEEAIQIFTRIVTLGIEVDANMVS 357
S+++ VS +VA + QNG EAI++ ++ GI+ +++
Sbjct: 357 SSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQMKATGIKAHDTLLN 403
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 114/257 (44%), Gaps = 30/257 (11%)
Query: 293 LMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTL----G 348
L+ ++ CG L+ Q+F+ D S ++ + + G E+A +F ++
Sbjct: 129 LLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGA 188
Query: 349 IEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNF--SQNPFVSNGLINMYSKCGELHD 406
++ + ++ VL + LGKQ+H+L K F ++ ++S LI Y + L D
Sbjct: 189 FKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLED 248
Query: 407 SLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACS- 465
+ V ++++ N+++W + + R G+ ++ + EM GI F ++L ACS
Sbjct: 249 ANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSW 308
Query: 466 -----------HAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIE 514
HA ++ G E D + R +++M G+ G +K+A+ +
Sbjct: 309 VSDGGRSGQQVHANAIKLGFE------SDCLIRCR------LIEMYGKYGKVKDAEKVFK 356
Query: 515 GLPENRGVLVWQALLGA 531
+ V W A++ +
Sbjct: 357 SSKDETSVSCWNAMVAS 373
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 103/422 (24%), Positives = 185/422 (43%), Gaps = 31/422 (7%)
Query: 128 DFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREIT 187
D+ R FK M R ++ + ++ T M+S + + G R +
Sbjct: 120 DWQRSLRLFKYMQ--RQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVF 177
Query: 188 VGNALITSYFKCGCFCQGRQVFDEM----IERNVVTWTAVISGLAQNEL-YEDGLRLFAQ 242
ALI +Y + G + ++ D M I +++T+ VI+ A+ L +E L LFA+
Sbjct: 178 SYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAE 237
Query: 243 MRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGS 302
MR + P+ +TY + L AC+ E + + G+ DL S L++ + K
Sbjct: 238 MRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRR 297
Query: 303 LEGAWQIF---ESAEEL-DGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSA 358
LE + S L D S V+L A+A++G +EA+ +F ++ G +AN S
Sbjct: 298 LEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSV 357
Query: 359 VLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKN 418
+L +FG +Q+ + N + N LI ++ + G + + +F++M ++N
Sbjct: 358 LLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEEN 417
Query: 419 ----SISWNSVIAAFAR---HGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVE 471
++ +I A + H D + LQ+ M I P+ + ++ A A L E
Sbjct: 418 IEPDMETYEGIIFACGKGGLHEDARKILQY---MTANDIVPSSKAYTGVIEAFGQAALYE 474
Query: 472 KGMEFLVSMTRDHRL--SPRSEHYACVVDMLGRAGLLKEAKNFI-----EGLPENRGVLV 524
E LV+ H + +P E + ++ R GL+KE++ + G+P NR
Sbjct: 475 ---EALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFN 531
Query: 525 WQ 526
Q
Sbjct: 532 AQ 533
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/444 (21%), Positives = 192/444 (43%), Gaps = 47/444 (10%)
Query: 84 VWNSLLSMYSKCGELQDAIKLFDRMP----VRDTVSWNSMISGFLRNRDFDAGFRFFKQM 139
++ ++S+ + G L +++FD MP R S+ ++I+ + RN ++ +M
Sbjct: 143 IYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRM 202
Query: 140 SESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKC 199
+ S T T+++AC +R GG + E +
Sbjct: 203 KNEKISPSIL---TYNTVINAC--------AR--------GGLDWEGLL----------- 232
Query: 200 GCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSL 259
G F + R E I+ ++VT+ ++S A L ++ +F M G + P+ TY +
Sbjct: 233 GLFAEMRH---EGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLV 289
Query: 260 MACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEEL--- 316
++ L + + G + G D+ + L++ Y+K GS++ A +F +
Sbjct: 290 ETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCT 349
Query: 317 -DGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQI 375
+ + +V+L F Q+G ++ Q+F + + + DA + ++ VFG G +
Sbjct: 350 PNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTL 409
Query: 376 HSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKN----SISWNSVIAAFAR 431
++++N + G+I K G D+ ++ MT + S ++ VI AF +
Sbjct: 410 FHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQ 469
Query: 432 HGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSE 491
AL + M G P+ TF SLL++ + GLV K E ++S D + +
Sbjct: 470 AALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLV-KESEAILSRLVDSGIPRNRD 528
Query: 492 HYACVVDMLGRAGLLKEA-KNFIE 514
+ ++ + G +EA K +++
Sbjct: 529 TFNAQIEAYKQGGKFEEAVKTYVD 552
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/441 (21%), Positives = 189/441 (42%), Gaps = 71/441 (16%)
Query: 81 ALFVWNSLLSMYSKCGELQDAIKLFDRMPVR----DTVSWNSMISGFLRN-RDFDAGFRF 135
++F + +L++ Y + G + +++L DRM +++N++I+ R D++
Sbjct: 175 SVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGL 234
Query: 136 FKQMSESRTVYSRFDKATLTTMLSAC-----------------DG---PEFSSVSRMIH- 174
F +M R + D T T+LSAC DG P+ ++ S ++
Sbjct: 235 FAEM---RHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVET 291
Query: 175 --------------GLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEM----IERN 216
G + GG +IT N L+ +Y K G + VF +M N
Sbjct: 292 FGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPN 351
Query: 217 VVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEG---RK 273
T++ +++ Q+ Y+D +LF +M+ + P+ TY +++ ++ EG ++
Sbjct: 352 ANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATY--NIL----IEVFGEGGYFKE 405
Query: 274 IHGLLWKL---GMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGV----SLTVILV 326
+ L + ++ D+ ++ K G E A +I + D V + T ++
Sbjct: 406 VVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIE 465
Query: 327 AFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQ 386
AF Q EEA+ F + +G ++L F G + + I S ++ +
Sbjct: 466 AFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPR 525
Query: 387 NPFVSNGLINMYSKCGELHDSLQVFYEMTQK----NSISWNSVIA--AFARHGDGSRALQ 440
N N I Y + G+ ++++ + +M + + + +V++ +FAR D R +
Sbjct: 526 NRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECR--E 583
Query: 441 FYEEMRVGGIAPTDVTFLSLL 461
+EEM+ I P+ + + +L
Sbjct: 584 QFEEMKASDILPSIMCYCMML 604
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 108/480 (22%), Positives = 212/480 (44%), Gaps = 50/480 (10%)
Query: 27 YPFPATSESVLNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWN 86
+ FP + L+ LS+++ + R G L S R+I++ S + L + N
Sbjct: 104 FHFPNFKHTSLS---LSAMIHILVRSGRLSDAQSCLLRMIRR--------SGVSRLEIVN 152
Query: 87 SLLSMYSKCGELQDAIKLFDRMPVRD------------------TVS---WNSMISGFLR 125
SL S +S CG L R V+ TVS N++I +R
Sbjct: 153 SLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVR 212
Query: 126 NRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSA-CDGPEFSSVSRMIHGLVFVGGFER 184
+ + ++++S S + + TL M++A C + V + + G +
Sbjct: 213 IGWVELAWGVYQEISRSGVGINVY---TLNIMVNALCKDGKMEKVGTFLSQVQEKGVYP- 268
Query: 185 EITVGNALITSYFKCGCFCQGRQVFDEM----IERNVVTWTAVISGLAQNELYEDGLRLF 240
+I N LI++Y G + ++ + M V T+ VI+GL ++ YE +F
Sbjct: 269 DIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVF 328
Query: 241 AQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKC 300
A+M +SP++ TY S LM + E K+ + + DL S++M L+++
Sbjct: 329 AEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRS 388
Query: 301 GSLEGAWQIFESAEEL----DGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMV 356
G+L+ A F S +E D V T+++ + + G A+ + ++ G +D
Sbjct: 389 GNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTY 448
Query: 357 SAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQ 416
+ +L L ++ + + ++ + + LI+ + K G L +++++F +M +
Sbjct: 449 NTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKE 508
Query: 417 K----NSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHA-CSHAGLVE 471
K + +++N+++ F + GD A + + +M I PT +++ L++A CS L E
Sbjct: 509 KRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAE 568
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/458 (19%), Positives = 185/458 (40%), Gaps = 56/458 (12%)
Query: 82 LFVWNSLLSMYSKCGELQDAIKLFDRMPVRD----TVSWNSMISGFLRNRDFDAGFRFFK 137
+ +N+L+S YS G +++A +L + MP + ++N++I+G ++ ++ F
Sbjct: 270 IVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFA 329
Query: 138 QMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYF 197
+M S G + T +L+
Sbjct: 330 EMLRS--------------------------------------GLSPDSTTYRSLLMEAC 351
Query: 198 KCGCFCQGRQVFDEMIERNVV----TWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTL 253
K G + +VF +M R+VV +++++S ++ + L F ++ + P+ +
Sbjct: 352 KKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNV 411
Query: 254 TYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESA 313
Y + ++ + + + G D+ + ++ K L A ++F
Sbjct: 412 IYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEM 471
Query: 314 EEL----DGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSL 369
E D +LT+++ + G + A+++F ++ I +D + +L FG +
Sbjct: 472 TERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDI 531
Query: 370 PLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKN----SISWNSV 425
K+I + ++ K P + L+N G L ++ +V+ EM KN + NS+
Sbjct: 532 DTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSM 591
Query: 426 IAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDH- 484
I + R G+ S F E+M G P +++ +L++ + K + M +
Sbjct: 592 IKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQG 651
Query: 485 RLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGV 522
L P Y ++ R +KEA+ + + E RGV
Sbjct: 652 GLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIE-RGV 688
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/408 (18%), Positives = 180/408 (44%), Gaps = 19/408 (4%)
Query: 83 FVWNSLLSMYSKCGELQDAIKLFDRMPVRDTV----SWNSMISGFLRNRDFDAGFRFFKQ 138
++++ + + SK G ++ A LFD M + ++ S+I G+ R ++ G+ +
Sbjct: 348 YMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVE 407
Query: 139 MSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFK 198
M + V S + T+ + C + ++ ++ G + + LI ++ +
Sbjct: 408 MKKRNIVISPYTYGTVVKGM--CSSGDLDGAYNIVKEMI-ASGCRPNVVIYTTLIKTFLQ 464
Query: 199 CGCFCQGRQVFDEMIER----NVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLT 254
F +V EM E+ ++ + ++I GL++ + ++ +M + PN T
Sbjct: 465 NSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFT 524
Query: 255 YLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAE 314
Y + + A K + + G+ + + + L++ Y K G + A + S
Sbjct: 525 YGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMV 584
Query: 315 EL----DGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLP 370
+ D + TV++ +N ++A +IF + GI D ++ F ++
Sbjct: 585 DQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQ 644
Query: 371 LGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQK----NSISWNSVI 426
I ++++ + N + N L+ + + GE+ + ++ EM+ K N++++ ++I
Sbjct: 645 KASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTII 704
Query: 427 AAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGM 474
+ + GD + A + ++EM++ G+ P + +L+ C VE+ +
Sbjct: 705 DGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAI 752
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/426 (19%), Positives = 180/426 (42%), Gaps = 50/426 (11%)
Query: 76 SSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVR----DTVSWNSMISGFLRNRDFDA 131
S R + ++ +L+ + + DA+++ M + D +NS+I G + + D
Sbjct: 446 SGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDE 505
Query: 132 GFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNA 191
F +M E+ + F + + EF+S + + + G ++ +
Sbjct: 506 ARSFLVEMVENGLKPNAFTYGAFIS--GYIEASEFASADKYVKEMRECGVLPNKV-LCTG 562
Query: 192 LITSYFKCGCFCQGRQVFDEMIERNVV----TWTAVISGLAQNELYEDGLRLFAQMRGGS 247
LI Y K G + + M+++ ++ T+T +++GL +N+ +D +F +MRG
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622
Query: 248 VSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAW 307
++P+ +Y + S + + + I + + G+ ++ I + L+ + + G +E A
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682
Query: 308 QIFE--SAEEL--DGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDA---------- 353
++ + S + L + V+ I+ + ++G EA ++F + G+ D+
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742
Query: 354 ---NMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQV 410
N V + +FG KK + + N LIN K G+ +V
Sbjct: 743 CRLNDVERAITIFGTN--------------KKGCASSTAPFNALINWVFKFGKTELKTEV 788
Query: 411 --------FYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLH 462
F + N +++N +I + G+ A + + +M+ + PT +T+ SLL+
Sbjct: 789 LNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLN 848
Query: 463 ACSHAG 468
G
Sbjct: 849 GYDKMG 854
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 140/306 (45%), Gaps = 19/306 (6%)
Query: 336 EAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLI 395
EA+++ + G VD + + + G +L + +H I + + +I
Sbjct: 95 EALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCITPLDARS----YHTVI 150
Query: 396 NMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDV 455
MYS C D+L VF EM ++NS +W ++I A++G+G RA+ + G P
Sbjct: 151 EMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKE 210
Query: 456 TFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEG 515
F ++ AC G + +G+ SM RD+ + E Y V++ML G L EA +F+E
Sbjct: 211 IFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVER 270
Query: 516 LPENRGVLVWQALLGACSIHGDSEMG-KFAADQLILAAPASSAPHVLMANIYSAEGKWKE 574
+ V +W+ L+ C + G E+G +FA +LI AS A + +A K
Sbjct: 271 MTVEPSVEMWETLMNLCWVQGYLELGDRFA--ELIKKLDASRMSKESNAGLVAA----KA 324
Query: 575 RAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLK-HLKDEG 633
A++++KE + + + K++ F GD H F R LK + D G
Sbjct: 325 SDSAMEKLKELRYCQMIR---DDPKKRMHEFRAGDTSHLGTVSAF----RSLKVQMLDIG 377
Query: 634 YVPDKR 639
+VP R
Sbjct: 378 FVPATR 383
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 81/174 (46%), Gaps = 20/174 (11%)
Query: 262 CSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSL 321
C V+AL E R +H + L +S ++++YS C S + A +F + + +
Sbjct: 122 CGEVEALEEARVVHDCITPLDARS----YHTVIEMYSGCRSTDDALNVFNEMPKRNSETW 177
Query: 322 TVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAV----LGVFGVGTSLPLGKQIHS 377
++ A+NG E AI +FTR + G + D + AV + + + L +H
Sbjct: 178 GTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGL-----LHF 232
Query: 378 LIIKKNF----SQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSIS-WNSVI 426
+ +++ S +V+ +I M + CG L ++L MT + S+ W +++
Sbjct: 233 ESMYRDYGMVLSMEDYVN--VIEMLAACGHLDEALDFVERMTVEPSVEMWETLM 284
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 172/395 (43%), Gaps = 27/395 (6%)
Query: 83 FVWNSLLSMYSKCGELQDAIKLFDRMP----VRDTVSWNSMISGFLRNRDFDAGFRFFKQ 138
+++ S++ + + +L +A + F M + DTV + ++I GF + D A +FF +
Sbjct: 317 YIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYE 376
Query: 139 MSESRTVYSRFDKATLTTMLSA-CDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYF 197
M SR + D T T ++S C + ++ H + F G E + LI Y
Sbjct: 377 M-HSRDITP--DVLTYTAIISGFCQIGDMVEAGKLFHEM-FCKGLEPDSVTFTELINGYC 432
Query: 198 KCGCFCQGRQVFDEMIER----NVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTL 253
K G +V + MI+ NVVT+T +I GL + + L +M + PN
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492
Query: 254 TYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESA 313
TY S + + E K+ G G+ +D + LMD Y K G ++ A +I
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL--- 549
Query: 314 EELDG-------VSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVG 366
+E+ G V+ V++ F +G E+ ++ ++ GI +A ++++ + +
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 609
Query: 367 TSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKN---SISWN 423
+L I+ + + + L+ + K + ++ +F EM K S+S
Sbjct: 610 NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 669
Query: 424 SV-IAAFARHGDGSRALQFYEEMRVGGIAPTDVTF 457
SV I F + A + +++MR G+A F
Sbjct: 670 SVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 124/273 (45%), Gaps = 8/273 (2%)
Query: 216 NVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIH 275
+V++++ V++G + + +L M+ + PN+ Y S + + LAE +
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 276 GLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELD----GVSLTVILVAFAQN 331
+ + G+ D + + L+D + K G + A + F D ++ T I+ F Q
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 332 GFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVS 391
G EA ++F + G+E D+ + ++ + + ++H+ +I+ S N
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 392 NGLINMYSKCGELHDSLQVFYEM----TQKNSISWNSVIAAFARHGDGSRALQFYEEMRV 447
LI+ K G+L + ++ +EM Q N ++NS++ + G+ A++ E
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 448 GGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSM 480
G+ VT+ +L+ A +G ++K E L M
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/399 (20%), Positives = 164/399 (41%), Gaps = 66/399 (16%)
Query: 85 WNSLLSMYSKCGELQDAIKLFDRMPVR----DTVSWNSMISGFLRNRDFDAGFRFFKQMS 140
+N ++ + G +++A L M ++ D +S++++++G+ R + D ++ + M
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 141 ESRTVYSRFDKATLTTMLS-ACDGPEFS-SVSRMIHGLVFVGGFEREITVGNALITSYFK 198
+ + ++ +L C E + S MI G + V LI + K
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ-----GILPDTVVYTTLIDGFCK 363
Query: 199 CGCFCQGRQVFDEMIERN----VVTWTAVISGLAQ-NELYEDGLRLFAQMRGGSVSPNTL 253
G + F EM R+ V+T+TA+ISG Q ++ E G +LF +M + P+++
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG-KLFHEMFCKGLEPDSV 422
Query: 254 TYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESA 313
T+ + + + ++H + + G ++ + L+D K G L+ A ++
Sbjct: 423 TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482
Query: 314 EEL----DGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSL 369
++ + + I+ ++G EEA+++ G+ D +
Sbjct: 483 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT----------- 531
Query: 370 PLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMT----QKNSISWNSV 425
L++ Y K GE+ + ++ EM Q +++N +
Sbjct: 532 ------------------------LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVL 567
Query: 426 IAAFARHG---DGSRALQFYEEMRVGGIAPTDVTFLSLL 461
+ F HG DG + L + M GIAP TF SL+
Sbjct: 568 MNGFCLHGMLEDGEKLLNW---MLAKGIAPNATTFNSLV 603
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 172/395 (43%), Gaps = 27/395 (6%)
Query: 83 FVWNSLLSMYSKCGELQDAIKLFDRMP----VRDTVSWNSMISGFLRNRDFDAGFRFFKQ 138
+++ S++ + + +L +A + F M + DTV + ++I GF + D A +FF +
Sbjct: 317 YIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYE 376
Query: 139 MSESRTVYSRFDKATLTTMLSA-CDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYF 197
M SR + D T T ++S C + ++ H + F G E + LI Y
Sbjct: 377 M-HSRDITP--DVLTYTAIISGFCQIGDMVEAGKLFHEM-FCKGLEPDSVTFTELINGYC 432
Query: 198 KCGCFCQGRQVFDEMIER----NVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTL 253
K G +V + MI+ NVVT+T +I GL + + L +M + PN
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492
Query: 254 TYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESA 313
TY S + + E K+ G G+ +D + LMD Y K G ++ A +I
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL--- 549
Query: 314 EELDG-------VSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVG 366
+E+ G V+ V++ F +G E+ ++ ++ GI +A ++++ + +
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 609
Query: 367 TSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKN---SISWN 423
+L I+ + + + L+ + K + ++ +F EM K S+S
Sbjct: 610 NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 669
Query: 424 SV-IAAFARHGDGSRALQFYEEMRVGGIAPTDVTF 457
SV I F + A + +++MR G+A F
Sbjct: 670 SVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 124/273 (45%), Gaps = 8/273 (2%)
Query: 216 NVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIH 275
+V++++ V++G + + +L M+ + PN+ Y S + + LAE +
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 276 GLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELD----GVSLTVILVAFAQN 331
+ + G+ D + + L+D + K G + A + F D ++ T I+ F Q
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 332 GFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVS 391
G EA ++F + G+E D+ + ++ + + ++H+ +I+ S N
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 392 NGLINMYSKCGELHDSLQVFYEM----TQKNSISWNSVIAAFARHGDGSRALQFYEEMRV 447
LI+ K G+L + ++ +EM Q N ++NS++ + G+ A++ E
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 448 GGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSM 480
G+ VT+ +L+ A +G ++K E L M
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/399 (20%), Positives = 164/399 (41%), Gaps = 66/399 (16%)
Query: 85 WNSLLSMYSKCGELQDAIKLFDRMPVR----DTVSWNSMISGFLRNRDFDAGFRFFKQMS 140
+N ++ + G +++A L M ++ D +S++++++G+ R + D ++ + M
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 141 ESRTVYSRFDKATLTTMLS-ACDGPEFS-SVSRMIHGLVFVGGFEREITVGNALITSYFK 198
+ + ++ +L C E + S MI G + V LI + K
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ-----GILPDTVVYTTLIDGFCK 363
Query: 199 CGCFCQGRQVFDEMIERN----VVTWTAVISGLAQ-NELYEDGLRLFAQMRGGSVSPNTL 253
G + F EM R+ V+T+TA+ISG Q ++ E G +LF +M + P+++
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG-KLFHEMFCKGLEPDSV 422
Query: 254 TYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESA 313
T+ + + + ++H + + G ++ + L+D K G L+ A ++
Sbjct: 423 TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482
Query: 314 EEL----DGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSL 369
++ + + I+ ++G EEA+++ G+ D +
Sbjct: 483 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT----------- 531
Query: 370 PLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMT----QKNSISWNSV 425
L++ Y K GE+ + ++ EM Q +++N +
Sbjct: 532 ------------------------LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVL 567
Query: 426 IAAFARHG---DGSRALQFYEEMRVGGIAPTDVTFLSLL 461
+ F HG DG + L + M GIAP TF SL+
Sbjct: 568 MNGFCLHGMLEDGEKLLNW---MLAKGIAPNATTFNSLV 603
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 105/481 (21%), Positives = 206/481 (42%), Gaps = 84/481 (17%)
Query: 38 NHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGE 97
NH S L++ R L L ++ +++K ++ + + +SLL+ Y
Sbjct: 115 NHYTYSILINCFCRRSQLPLALAVLGKMMK----LGYEPN----IVTLSSLLNGYCHSKR 166
Query: 98 LQDAIKLFDRMPVR----DTVSWNSMISG-FLRNRDFDAGFRFFKQMSESRTVYSRFDKA 152
+ +A+ L D+M V +TV++N++I G FL N+ +A A
Sbjct: 167 ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEA-------------------MA 207
Query: 153 TLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEM 212
+ M++ P+ + +++GL G + + N + QG+
Sbjct: 208 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME----------QGK------ 251
Query: 213 IERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGR 272
+E V+ + +I GL + + +D L LF +M + PN +TY SSL++C
Sbjct: 252 LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTY-SSLISC---------- 300
Query: 273 KIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNG 332
L G SD S L+ + E D + + ++ AF + G
Sbjct: 301 -----LCNYGRWSD---ASRLLS------------DMIERKINPDVFTFSALIDAFVKEG 340
Query: 333 FEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSN 392
EA +++ +V I+ S+++ F + L KQ+ ++ K+ + N
Sbjct: 341 KLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYN 400
Query: 393 GLINMYSKCGELHDSLQVFYEMTQK----NSISWNSVIAAFARHGDGSRALQFYEEMRVG 448
LI + K + + ++VF EM+Q+ N++++N +I + GD A + ++EM
Sbjct: 401 TLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD 460
Query: 449 GIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKE 508
G+ P +T+ +LL G +EK M + R ++ P Y +++ + +AG +++
Sbjct: 461 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS-KMEPTIYTYNIMIEGMCKAGKVED 519
Query: 509 A 509
Sbjct: 520 G 520
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/375 (21%), Positives = 175/375 (46%), Gaps = 28/375 (7%)
Query: 116 WNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSA-CDGPEFSSVSRMIH 174
+N++I G + + D FK+M E++ + R + T ++++S C+ +S SR++
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEM-ETKGI--RPNVVTYSSLISCLCNYGRWSDASRLLS 315
Query: 175 GLVFVGGFEREIT----VGNALITSYFKCGCFCQGRQVFDEMIERNV----VTWTAVISG 226
++ ER+I +ALI ++ K G + +++DEM++R++ VT++++I+G
Sbjct: 316 DMI-----ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLING 370
Query: 227 LAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSD 286
++ ++ ++F M P+ +TY + + + + EG ++ + + G+ +
Sbjct: 371 FCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 430
Query: 287 LCIESALMDLYSKCGSLEGAWQIFESAEELDGV-----SLTVILVAFAQNGFEEEAIQIF 341
+ L+ + G + A +IF+ DGV + +L +NG E+A+ +F
Sbjct: 431 TVTYNILIQGLFQAGDCDMAQEIFKEMVS-DGVPPNIMTYNTLLDGLCKNGKLEKAMVVF 489
Query: 342 TRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKC 401
+ +E + ++ + G + + K + N +I+ + +
Sbjct: 490 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRK 549
Query: 402 GELHDSLQVFYEM----TQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTF 457
G ++ +F EM T NS +N++I A R GD + + +EMR G A D +
Sbjct: 550 GSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFA-GDAST 608
Query: 458 LSLLHACSHAGLVEK 472
+ L+ H G ++K
Sbjct: 609 IGLVTNMLHDGRLDK 623
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/302 (18%), Positives = 127/302 (42%), Gaps = 15/302 (4%)
Query: 319 VSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSL 378
+ + +L A A+ + I + ++ LGI + S ++ F + LPL +
Sbjct: 82 IEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGK 141
Query: 379 IIKKNFSQNPFVSNGLINMYSKCGELHDSL----QVFYEMTQKNSISWNSVIAAFARHGD 434
++K + N + L+N Y + +++ Q+F Q N++++N++I H
Sbjct: 142 MMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNK 201
Query: 435 GSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYA 494
S A+ + M G P VT+ +++ G + L M + +L P Y
Sbjct: 202 ASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQG-KLEPGVLIYN 260
Query: 495 CVVDMLGRAGLLKEAKNFIEGLPENRG----VLVWQALLGACSIHGD-SEMGKFAADQLI 549
++D L + + +A N + + E +G V+ + +L+ +G S+ + +D +
Sbjct: 261 TIIDGLCKYKHMDDALNLFKEM-ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319
Query: 550 LAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGD 609
+ + + EGK E +++ ++ V + + S + ++ F + D
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVE----AEKLYDEMVKRSIDPSIVTYSSLINGFCMHD 375
Query: 610 KL 611
+L
Sbjct: 376 RL 377
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 105/505 (20%), Positives = 215/505 (42%), Gaps = 37/505 (7%)
Query: 110 VRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSV 169
VR ++ ++ L + F+ F M ESR + S D L +++ +F V
Sbjct: 34 VRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMK--KFDVV 91
Query: 170 SRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVF------DEMI----ERNVVT 219
+ L +G V + L T CFCQ Q + +M+ E ++VT
Sbjct: 92 INLCDHLQIMG-------VSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVT 144
Query: 220 WTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLW 279
+T++I+G E+ + + QM + P+ + Y + + + + + +
Sbjct: 145 FTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQME 204
Query: 280 KLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEEL----DGVSLTVILVAFAQNGFEE 335
G++ D+ + ++L++ G A + + D ++ ++ AF + G
Sbjct: 205 NYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFL 264
Query: 336 EAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLI 395
+A +++ ++ + I + ++++ F + + +Q+ L+ K + LI
Sbjct: 265 DAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLI 324
Query: 396 NMYSKCGELHDSLQVFYEMTQK----NSISWNSVIAAFARHGDGSRALQFYEEMRVGGIA 451
N + KC ++ D++++FYEM+QK N+I++ ++I F + G + A + + M G+
Sbjct: 325 NGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVP 384
Query: 452 PTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHR--LSPRSEHYACVVDMLGRAGLLKEA 509
P T+ LLH + G V+K + M + ++P Y ++ L G L++A
Sbjct: 385 PNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKA 444
Query: 510 KNFIEGLPENRGVLVWQALLGACSIHGDSEMGKFA-ADQLILAAPASSA-PHVL----MA 563
E + + + + I G + GK A L + P+ P+V+ M
Sbjct: 445 LMVFEDMRKRE--MDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMI 502
Query: 564 NIYSAEGKWKERAGAIKRMKEKGVA 588
+ EG E ++MKE GV+
Sbjct: 503 SGLFREGLKHEAHVLFRKMKEDGVS 527
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/456 (20%), Positives = 192/456 (42%), Gaps = 55/456 (12%)
Query: 82 LFVWNSLLSMYSKCGELQDAIKLFDRMPVR-DTVSWNSMISGFLRNRDFDAGFRFFKQMS 140
+ +N ++S Y K GE+ +A+ + DRM V D V++N+++ + +M
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRML 231
Query: 141 ESRTVYSRFDKATLTTMLSA-CDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKC 199
+ R Y D T T ++ A C R+ VG+A+
Sbjct: 232 Q-RDCYP--DVITYTILIEATC----------------------RDSGVGHAM------- 259
Query: 200 GCFCQGRQVFDEMIER----NVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTY 255
++ DEM +R +VVT+ +++G+ + ++ ++ M PN +T+
Sbjct: 260 -------KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITH 312
Query: 256 LSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEE 315
L + + K+ + + G + + L++ + G L A I E +
Sbjct: 313 NIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQ 372
Query: 316 ----LDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPL 371
+ +S +L F + + AI+ R+V+ G D + +L +
Sbjct: 373 HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVED 432
Query: 372 GKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKN----SISWNSVIA 427
+I + + K S N +I+ +K G+ ++++ EM K+ +I+++S++
Sbjct: 433 AVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVG 492
Query: 428 AFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLS 487
+R G A++F+ E GI P VTF S++ + ++ ++FLV M +
Sbjct: 493 GLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMI-NRGCK 551
Query: 488 PRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVL 523
P Y +++ L G+ KEA + L N+G++
Sbjct: 552 PNETSYTILIEGLAYEGMAKEALELLNELC-NKGLM 586
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 89/421 (21%), Positives = 176/421 (41%), Gaps = 38/421 (9%)
Query: 86 NSLLSMYSKCGELQDAIKLFDRM----PVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSE 141
N+ L + GEL++ K + M V D + ++I GF R + + +
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 142 SRTVYSRFDKATLTTMLSA-CDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCG 200
S V D T M+S C E ++ ++ + ++ N ++ S G
Sbjct: 166 SGAVP---DVITYNVMISGYCKAGEINNALSVLDRM----SVSPDVVTYNTILRSLCDSG 218
Query: 201 CFCQGRQVFDEMIERN----VVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYL 256
Q +V D M++R+ V+T+T +I ++ ++L +MR +P+ +TY
Sbjct: 219 KLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYN 278
Query: 257 SSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEEL 316
+ L E K + G Q ++ + + L S C + G W AE+L
Sbjct: 279 VLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNII--LRSMCST--GRWM---DAEKL 331
Query: 317 ------DGVSLTV----ILVAF-AQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGV 365
G S +V IL+ F + G AI I ++ G + ++ + +L F
Sbjct: 332 LADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCK 391
Query: 366 GTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNS----IS 421
+ + ++ + + N ++ K G++ D++++ +++ K I+
Sbjct: 392 EKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT 451
Query: 422 WNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMT 481
+N+VI A+ G +A++ +EMR + P +T+ SL+ S G V++ ++F
Sbjct: 452 YNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFE 511
Query: 482 R 482
R
Sbjct: 512 R 512
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 100/456 (21%), Positives = 187/456 (41%), Gaps = 22/456 (4%)
Query: 84 VWNSLLSMYSKCGELQDAIKLFDRMP----VRDTVSWNSMISGFLRNRDFDAGFRFFKQM 139
+N L+ + +L+ AI + + MP V D ++ +++ G++ D D R +QM
Sbjct: 191 TFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQM 250
Query: 140 SESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKC 199
E +S + C I + GF + N L+ K
Sbjct: 251 VEFGCSWSNVSVNVIVH--GFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKA 308
Query: 200 GCFCQGRQVFDEMIER----NVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTY 255
G ++ D M++ +V T+ +VISGL + ++ + + QM SPNT+TY
Sbjct: 309 GHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTY 368
Query: 256 LSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAE- 314
+ + + E ++ +L G+ D+C ++L+ + A ++FE
Sbjct: 369 NTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRS 428
Query: 315 ---ELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPL 371
E D + +++ + G +EA+ + ++ G + ++ F
Sbjct: 429 KGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTRE 488
Query: 372 GKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMT----QKNSISWNSVIA 427
++I + S+N N LI+ K + D+ Q+ +M + + ++NS++
Sbjct: 489 AEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLT 548
Query: 428 AFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMT-RDHRL 486
F R GD +A + M G P VT+ +L+ AG VE + L S+ + L
Sbjct: 549 HFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINL 608
Query: 487 SPRSEHYACVVDMLGRAGLLKEAKN-FIEGLPENRG 521
+P + Y V+ L R EA N F E L +N
Sbjct: 609 TPHA--YNPVIQGLFRKRKTTEAINLFREMLEQNEA 642
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 119/286 (41%), Gaps = 51/286 (17%)
Query: 82 LFVWNSLLSMYSKCGELQDAIKLFDRMPVRD----TVSWNSMIS---------------- 121
++ +NS++S K GE+++A+++ D+M RD TV++N++IS
Sbjct: 330 VYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELAR 389
Query: 122 -------------------GFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTML-SAC 161
G R+ F++M R+ D+ T ++ S C
Sbjct: 390 VLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM---RSKGCEPDEFTYNMLIDSLC 446
Query: 162 DGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEM----IERNV 217
+ M+ + + G R + N LI + K + ++FDEM + RN
Sbjct: 447 SKGKLDEALNMLKQME-LSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNS 505
Query: 218 VTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMA-CSGVQALAEGRKIHG 276
VT+ +I GL ++ ED +L QM P+ TY S L C G + + I
Sbjct: 506 VTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRG-GDIKKAADIVQ 564
Query: 277 LLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLT 322
+ G + D+ L+ K G +E A ++ S ++ G++LT
Sbjct: 565 AMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSI-QMKGINLT 609
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 105/471 (22%), Positives = 192/471 (40%), Gaps = 71/471 (15%)
Query: 84 VWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESR 143
V + LLS+ CG P + V++ ++I+GF + + D F FK M E R
Sbjct: 269 VASRLLSLVLDCG------------PAPNVVTFCTLINGFCKRGEMDRAFDLFKVM-EQR 315
Query: 144 TVYSRFDKATLTTMLSACDGPEFSSVSRMIHGL---VFVGGFEREITVGNALITSYFKCG 200
+ D +T++ DG + + M H L G + ++ V ++ I Y K G
Sbjct: 316 GIEP--DLIAYSTLI---DGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSG 370
Query: 201 CFCQGRQVFDEM----IERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYL 256
V+ M I NVVT+T +I GL Q+ + ++ Q+ + P+ +TY
Sbjct: 371 DLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYS 430
Query: 257 SSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCG--------------- 301
S + L G ++ + K+G D+ I L+D SK G
Sbjct: 431 SLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQ 490
Query: 302 ----------SLEGAW---QIFESAEEL-----------DGVSLTVILVAFAQNGFEEEA 337
SL W F+ A ++ D + T ++ G EEA
Sbjct: 491 SIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEA 550
Query: 338 IQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINM 397
+ +F R+ +G+E DA ++ F +G Q+ L+ + S + V N +I++
Sbjct: 551 LFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHL 610
Query: 398 YSKCGELHDSLQVFYEMT----QKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPT 453
KC + D+ + F + + + +++N++I + A + +E ++V P
Sbjct: 611 LFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPN 670
Query: 454 DVTFLSLLHA-CSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRA 503
VT L+H C + + G + S+ + P + Y C++D ++
Sbjct: 671 TVTLTILIHVLCKNNDM--DGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKS 719
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 104/516 (20%), Positives = 213/516 (41%), Gaps = 84/516 (16%)
Query: 87 SLLSMYSKCGELQDAIKLFDRMPVR----DTVSWNSMISGFLRNRDFDAGFRFFKQ---- 138
+L++ + K GE+ A LF M R D ++++++I G+ + G + F Q
Sbjct: 291 TLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHK 350
Query: 139 --------MSESRTVYSRF-DKATLTTMLS--ACDG--PEFSSVSRMIHGL--------- 176
S + VY + D AT + + C G P + + +I GL
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410
Query: 177 ------VFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIER----NVVTWTAVISG 226
+ G E I ++LI + KCG G ++++MI+ +VV + ++ G
Sbjct: 411 FGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDG 470
Query: 227 LAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSD 286
L++ L +R +M G S+ N + + S + + E K+ L+ G++ D
Sbjct: 471 LSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPD 530
Query: 287 LCIESALMDLYSKCGSLEGA----WQIFESAEELDGVSLTVILVAFAQN-----GFE--- 334
+ + +M + G LE A +++F+ E D ++ ++ AF ++ G +
Sbjct: 531 VATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFD 590
Query: 335 ---------------------------EEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGT 367
E+A + F ++ +E D + ++ +
Sbjct: 591 LMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLR 650
Query: 368 SLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQK----NSISWN 423
L ++I L+ F N LI++ K ++ ++++F M +K N++++
Sbjct: 651 RLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYG 710
Query: 424 SVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRD 483
++ F++ D + + +EEM+ GI+P+ V++ ++ G V++ + D
Sbjct: 711 CLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATN-IFHQAID 769
Query: 484 HRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPEN 519
+L P YA ++ + G L EA E + N
Sbjct: 770 AKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRN 805
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 119/286 (41%), Gaps = 25/286 (8%)
Query: 77 SRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVR---------DTVSWNSMISGFLRNR 127
S R + V+NSL+ + + +A+K+F M + TV S++ G L
Sbjct: 491 SIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEA 550
Query: 128 DFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREIT 187
F FR FK E D T++ A ++ + L+ +I
Sbjct: 551 LF-LFFRMFKMGLEP-------DALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIA 602
Query: 188 VGNALITSYFKCGCFCQGRQVFDEMI----ERNVVTWTAVISGLAQNELYEDGLRLFAQM 243
V N +I FKC + F+ +I E ++VT+ +I G ++ R+F +
Sbjct: 603 VCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELL 662
Query: 244 RGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSL 303
+ PNT+T + + ++ ++ + G + + LMD +SK +
Sbjct: 663 KVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDI 722
Query: 304 EGAWQIFESAEEL----DGVSLTVILVAFAQNGFEEEAIQIFTRIV 345
EG++++FE +E VS ++I+ + G +EA IF + +
Sbjct: 723 EGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI 768
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 90/475 (18%), Positives = 185/475 (38%), Gaps = 72/475 (15%)
Query: 37 LNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCG 96
L+ SS + V + G+L S ++ R++ Q + + L+ + G
Sbjct: 354 LDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ--------GISPNVVTYTILIKGLCQDG 405
Query: 97 ELQDAIKLFDRMPVR----DTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKA 152
+ +A ++ ++ R V+++S+I GF + + +GF ++ M +
Sbjct: 406 RIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYG 465
Query: 153 TLTTMLSACDGPEFSSVSRMIHGLVF----VGGFER-EITVGNALITSYFKCGCFCQGRQ 207
L DG S M+H + F +G R + V N+LI + + F + +
Sbjct: 466 VLV------DG--LSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALK 517
Query: 208 VFDEM----IERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACS 263
VF M I+ +V T+T V+ E+ L LF +M + P+ L Y + + A
Sbjct: 518 VFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFC 577
Query: 264 GVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIF----ESAEELDGV 319
G ++ L+ + + +D+ + + ++ L KC +E A + F E E D V
Sbjct: 578 KHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIV 637
Query: 320 SLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLI 379
+ ++ + +EA +IF + + ++ ++ V + ++ S++
Sbjct: 638 TYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIM 697
Query: 380 IKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQK---------------------- 417
+K N L++ +SK ++ S ++F EM +K
Sbjct: 698 AEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRV 757
Query: 418 -----------------NSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDV 455
+ +++ +I + + G A YE M G+ P D+
Sbjct: 758 DEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 812
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 94/448 (20%), Positives = 191/448 (42%), Gaps = 63/448 (14%)
Query: 82 LFVWNSLLSMYSKCGELQDAIKLFDRM------PVRDTVSWNSMISGFLRNRDFDAGFRF 135
L+ +N L++ + + ++ A+ L +M P V+ +S+++G+ +
Sbjct: 120 LYTYNILINCFCRRSQISLALALLGKMMKLGYEP--SIVTLSSLLNGYCHGKRISDAVAL 177
Query: 136 FKQMSESRTVYSRFDKATLTTMLSAC-----DGPEFSSVSRMIHGLVFVGGFEREITVGN 190
QM E + R D T TT++ + V RM+ G + +
Sbjct: 178 VDQMVE---MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR-----GCQPNLVTYG 229
Query: 191 ALITSYFKCGCFCQGRQVFDEM----IERNVVTWTAVISGLAQNELYEDGLRLFAQMRGG 246
++ K G + ++M IE NVV ++ VI L + +D L LF +M
Sbjct: 230 VVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 289
Query: 247 SVSPNTLTYLSSLMAC-SGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEG 305
V PN +TY SSL++C + ++ ++ + + + ++ +AL+D
Sbjct: 290 GVRPNVITY-SSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALID---------- 338
Query: 306 AWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGV 365
AF + G EA +++ ++ I+ D S+++ F +
Sbjct: 339 ---------------------AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 377
Query: 366 GTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQK----NSIS 421
L K + L+I K+ N N LIN + K + + +++F EM+Q+ N+++
Sbjct: 378 HDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVT 437
Query: 422 WNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMT 481
+ ++I F + D A +++M G+ P +T+ +LL G +EK M +
Sbjct: 438 YTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 497
Query: 482 RDHRLSPRSEHYACVVDMLGRAGLLKEA 509
R ++ P Y +++ + +AG +++
Sbjct: 498 RS-KMEPTIYTYNIMIEGMCKAGKVEDG 524
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/393 (19%), Positives = 165/393 (41%), Gaps = 66/393 (16%)
Query: 82 LFVWNSLLSMYSKCGELQDAIKLFDRMPVR----DTVSWNSMISGFLRNRDFDAGFRFFK 137
L + +++ K G++ A L ++M + V ++++I + R D F
Sbjct: 225 LVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFT 284
Query: 138 QMSESRTVYSRFDKATLTTMLSA-CDGPEFSSVSRMIHGLVFVGGFEREITVG----NAL 192
+M E++ V R + T ++++S C+ +S SR++ ++ ER+I NAL
Sbjct: 285 EM-ENKGV--RPNVITYSSLISCLCNYERWSDASRLLSDMI-----ERKINPNVVTFNAL 336
Query: 193 ITSYFKCGCFCQGRQVFDEMIER----NVVTWTAVISGLAQNELYEDGLRLFAQMRGGSV 248
I ++ K G + +++DEMI+R ++ T++++I+G ++ ++ +F M
Sbjct: 337 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 396
Query: 249 SPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQ 308
PN +TY + + + + EG ++ + + G+ + + L+ + + + A
Sbjct: 397 FPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 456
Query: 309 IFESAEELDGV-----SLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVF 363
+F+ DGV + +L +NG E+A+ +F
Sbjct: 457 VFKQMVS-DGVHPNIMTYNTLLDGLCKNGKLEKAMVVF---------------------- 493
Query: 364 GVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQK----NS 419
+ + + N +I K G++ D +F ++ K +
Sbjct: 494 -------------EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDV 540
Query: 420 ISWNSVIAAFARHGDGSRALQFYEEMRVGGIAP 452
I +N++I+ F R G A + +MR G P
Sbjct: 541 IIYNTMISGFCRKGLKEEADALFRKMREDGPLP 573
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 108/260 (41%), Gaps = 54/260 (20%)
Query: 38 NHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGE 97
N ++L+ ++G L ++ +IK+ S D +F ++SL++ +
Sbjct: 329 NVVTFNALIDAFVKEGKLVEAEKLYDEMIKR----SIDPD----IFTYSSLINGFCMHDR 380
Query: 98 LQDAIKLFDRMPVRD----TVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKAT 153
L +A +F+ M +D V++N++I+GF + + D G F++MS+ V + T
Sbjct: 381 LDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLV---GNTVT 437
Query: 154 LTTMLSA------CDG--------------PEFSSVSRMIHGLVFVGGFEREITV----- 188
TT++ CD P + + ++ GL G E+ + V
Sbjct: 438 YTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 497
Query: 189 ----------GNALITSYFKCGCFCQGRQVFDEM----IERNVVTWTAVISGLAQNELYE 234
N +I K G G +F + ++ +V+ + +ISG + L E
Sbjct: 498 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKE 557
Query: 235 DGLRLFAQMRGGSVSPNTLT 254
+ LF +MR P++ T
Sbjct: 558 EADALFRKMREDGPLPDSGT 577
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 98/442 (22%), Positives = 191/442 (43%), Gaps = 42/442 (9%)
Query: 84 VWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESR 143
V + LLS+ CG P + V++ ++I+GF + + D F FK M E R
Sbjct: 269 VASRLLSLVLDCG------------PAPNVVTFCTLINGFCKRGEMDRAFDLFKVM-EQR 315
Query: 144 TVYSRFDKATLTTMLSACDGPEFSSVSRMIHGL---VFVGGFEREITVGNALITSYFKCG 200
+ D +T++ DG + + M H L G + ++ V ++ I Y K G
Sbjct: 316 GIEP--DLIAYSTLI---DGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSG 370
Query: 201 CFCQGRQVFDEM----IERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYL 256
V+ M I NVVT+T +I GL Q+ + ++ Q+ + P+ +TY
Sbjct: 371 DLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYS 430
Query: 257 SSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCG----SLEGAWQIFES 312
S + L G ++ + K+G D+ I L+D SK G ++ + ++
Sbjct: 431 SLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQ 490
Query: 313 AEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGV------FGVG 366
+ L+ V ++ + + +EA+++F + GI+ D + V+ V F
Sbjct: 491 SIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKH 550
Query: 367 TSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMT----QKNSISW 422
+G Q+ L+ + S + V N +I++ KC + D+ + F + + + +++
Sbjct: 551 MKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTY 610
Query: 423 NSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHA-CSHAGLVEKGMEFLVSMT 481
N++I + A + +E ++V P VT L+H C + + G + S+
Sbjct: 611 NTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDM--DGAIRMFSIM 668
Query: 482 RDHRLSPRSEHYACVVDMLGRA 503
+ P + Y C++D ++
Sbjct: 669 AEKGSKPNAVTYGCLMDWFSKS 690
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 100/487 (20%), Positives = 204/487 (41%), Gaps = 55/487 (11%)
Query: 87 SLLSMYSKCGELQDAIKLFDRMPVR----DTVSWNSMISGFLRNRDFDAGFRFFKQ---- 138
+L++ + K GE+ A LF M R D ++++++I G+ + G + F Q
Sbjct: 291 TLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHK 350
Query: 139 --------MSESRTVYSRF-DKATLTTMLS--ACDG--PEFSSVSRMIHGL--------- 176
S + VY + D AT + + C G P + + +I GL
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410
Query: 177 ------VFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIER----NVVTWTAVISG 226
+ G E I ++LI + KCG G ++++MI+ +VV + ++ G
Sbjct: 411 FGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDG 470
Query: 227 LAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSD 286
L++ L +R +M G S+ N + + S + + E K+ L+ G++ D
Sbjct: 471 LSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPD 530
Query: 287 LCIESALM------DLYSKCGSLEGAWQIFESAEE----LDGVSLTVILVAFAQNGFEEE 336
+ + +M D + K Q+F+ + D V++ + E+
Sbjct: 531 VATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIED 590
Query: 337 AIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLIN 396
A + F ++ +E D + ++ + L ++I L+ F N LI+
Sbjct: 591 ASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIH 650
Query: 397 MYSKCGELHDSLQVFYEMTQK----NSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAP 452
+ K ++ ++++F M +K N++++ ++ F++ D + + +EEM+ GI+P
Sbjct: 651 VLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISP 710
Query: 453 TDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNF 512
+ V++ ++ G V++ + D +L P YA ++ + G L EA
Sbjct: 711 SIVSYSIIIDGLCKRGRVDEATN-IFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALL 769
Query: 513 IEGLPEN 519
E + N
Sbjct: 770 YEHMLRN 776
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 111/277 (40%), Gaps = 36/277 (12%)
Query: 77 SRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFF 136
S R + V+NSL+ + + +A+K+F M G + A F
Sbjct: 491 SIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM-------------GIYGIKPDVATFTTV 537
Query: 137 KQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSY 196
++S + + K T+ L F + R +I V N +I
Sbjct: 538 MRVSIMEDAFCKHMKPTIGLQL-------FDLMQR--------NKISADIAVCNVVIHLL 582
Query: 197 FKCGCFCQGRQVFDEMI----ERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNT 252
FKC + F+ +I E ++VT+ +I G ++ R+F ++ PNT
Sbjct: 583 FKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNT 642
Query: 253 LTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFES 312
+T + + ++ ++ + G + + LMD +SK +EG++++FE
Sbjct: 643 VTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEE 702
Query: 313 AEEL----DGVSLTVILVAFAQNGFEEEAIQIFTRIV 345
+E VS ++I+ + G +EA IF + +
Sbjct: 703 MQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI 739
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 107/527 (20%), Positives = 228/527 (43%), Gaps = 30/527 (5%)
Query: 8 NTHLPSWVDSLKSKAPISQYPFPATSESVLNHAHLSSLLSVCGRDGNLHLGSSIHARIIK 67
N + V S + S Y +++ +N LS LL + + A ++K
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135
Query: 68 QPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDR---MPVRDTVSWNSMISGFL 124
+ F+F+ N L L +CG+ ++ R MP D S+N++I GF
Sbjct: 136 RG--FAFNVYNHNILLKG---LCRNLECGKAVSLLREMRRNSLMP--DVFSYNTVIRGFC 188
Query: 125 RNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSA-CDGPEFSSVSRMIHGLVFVGGFE 183
++ + +M S +S T ++ A C + + + F+G E
Sbjct: 189 EGKELEKALELANEMKGSGCSWSL---VTWGILIDAFCKAGKMDEAMGFLKEMKFMG-LE 244
Query: 184 REITVGNALITSYFKCGCFCQGRQVFDEMIERN----VVTWTAVISGLAQNELYEDGLRL 239
++ V +LI + CG +G+ +FDE++ER +T+ +I G + ++ +
Sbjct: 245 ADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEI 304
Query: 240 FAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSK 299
F M V PN TY + GV E ++ L+ + + + + +++ K
Sbjct: 305 FEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCK 364
Query: 300 CGSLEGAWQIFESAEEL----DGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANM 355
G + A +I E ++ D ++ ++L G +EA ++ ++ D ++
Sbjct: 365 DGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDV 424
Query: 356 VSAVLGVFGVGTSLPLGK--QIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYE 413
+S + G+ L + I+ L+++K + + +N L+N K G+++ +++++ +
Sbjct: 425 ISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQ 484
Query: 414 MTQ----KNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGL 469
++ +NS ++ ++I F + G + A +MRV + P+ + LL + G
Sbjct: 485 ISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGS 544
Query: 470 VEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGL 516
+++ M RD+ P + ++D +AG +K A++ + G+
Sbjct: 545 LDQAWRLFEEMQRDNNF-PDVVSFNIMIDGSLKAGDIKSAESLLVGM 590
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 107/469 (22%), Positives = 202/469 (43%), Gaps = 36/469 (7%)
Query: 78 RRNAL----FVWNSLLSMYSKCGELQDAIKLFDRMPVR----DTVSWNSMISGFLRNRDF 129
RRN+L F +N+++ + + EL+ A++L + M V+W +I F +
Sbjct: 169 RRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKM 228
Query: 130 DAGFRFFKQMSESRTVYSRFDKATLTTMLSA-CDGPEFSSVSRMIHGLVFVGGFEREITV 188
D F K+M + + D T+++ CD E + ++ G IT
Sbjct: 229 DEAMGFLKEM---KFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITY 285
Query: 189 GNALITSYFKCGCFCQGRQVFDEMIER----NVVTWTAVISGLAQNELYEDGLRLFAQMR 244
N LI + K G + ++F+ MIER NV T+T +I GL ++ L+L M
Sbjct: 286 -NTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMI 344
Query: 245 GGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLE 304
PN +TY + +A+ +I L+ K + D + L+ G L+
Sbjct: 345 EKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLD 404
Query: 305 GAWQIF------ESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVT---LGIEVDAN- 354
A ++ S + D +S ++ + +A+ I+ +V G V N
Sbjct: 405 EASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNI 464
Query: 355 MVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEM 414
++++ L V ++ L KQI I +N +I+ + K G L+ + + +M
Sbjct: 465 LLNSTLKAGDVNKAMELWKQISDSKIVRNSD----TYTAMIDGFCKTGMLNVAKGLLCKM 520
Query: 415 T----QKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLV 470
Q + +N ++++ + G +A + +EEM+ P V+F ++ AG +
Sbjct: 521 RVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDI 580
Query: 471 EKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPEN 519
+ LV M+R LSP Y+ +++ + G L EA +F + + ++
Sbjct: 581 KSAESLLVGMSR-AGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDS 628
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 126/306 (41%), Gaps = 47/306 (15%)
Query: 84 VWNSLLSMYSKCGELQDAIKLFDRMPVR----DTVSWNSMISGFLRNRDFDAGFRFFKQM 139
+N +++ K G + DA+++ + M R D +++N ++ G D D
Sbjct: 354 TYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEA------- 406
Query: 140 SESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVF-----------------VGGF 182
S+ +Y ++ T P+ S + +IHGL +G
Sbjct: 407 --SKLLYLMLKDSSYTD-------PDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAG 457
Query: 183 EREITVGNALITSYFKCGCFCQG----RQVFDEMIERNVVTWTAVISGLAQNELYEDGLR 238
+R T N L+ S K G + +Q+ D I RN T+TA+I G + +
Sbjct: 458 DRVTT--NILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKG 515
Query: 239 LFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYS 298
L +MR + P+ Y L + +L + ++ + + D+ + ++D
Sbjct: 516 LLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSL 575
Query: 299 KCGSLEGAWQIF----ESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDAN 354
K G ++ A + + D + + ++ F + G+ +EAI F ++V G E DA+
Sbjct: 576 KAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAH 635
Query: 355 MVSAVL 360
+ +VL
Sbjct: 636 ICDSVL 641
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 123/564 (21%), Positives = 228/564 (40%), Gaps = 79/564 (14%)
Query: 99 QDAIKLFDRM----PVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATL 154
DA+ LF M P+ + +N + S + + ++ KQM +S + TL
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIY---TL 126
Query: 155 TTMLSA-CDGPEFS-SVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEM 212
+ M++ C + S + S M G + G+E + + N L+ + ++ D M
Sbjct: 127 SIMINCFCRCRKLSYAFSTM--GKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRM 184
Query: 213 IER----NVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTY--LSSLMACSGVQ 266
+E ++T +++GL N D + L +M PN +TY + ++M SG
Sbjct: 185 VEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQT 244
Query: 267 ALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILV 326
ALA M+L K + E +LD V ++I+
Sbjct: 245 ALA------------------------MELLRK---------MEERNIKLDAVKYSIIID 271
Query: 327 AFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQ 386
++G + A +F + G + D + ++G F G ++ +IK+ S
Sbjct: 272 GLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISP 331
Query: 387 NPFVSNGLINMYSKCGELHDSLQVFYEMTQK----NSISWNSVIAAFARHGDGSRALQFY 442
N + LI+ + K G+L ++ Q+ EM Q+ N+I++NS+I F + A+Q
Sbjct: 332 NVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMV 391
Query: 443 EEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGR 502
+ M G P +TF L++ A ++ G+E M+ ++ + Y +V +
Sbjct: 392 DLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIA-NTVTYNTLVQGFCQ 450
Query: 503 AGLLKEAKNFIEGLPENR---GVLVWQALLGACSIHGDSE-----MGKFAADQLILAAPA 554
+G L+ AK + + R ++ ++ LL +G+ E GK ++ L
Sbjct: 451 SGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGI 510
Query: 555 SSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQ 614
M N + W + KGV + I +S D L +
Sbjct: 511 YMIIIHGMCNASKVDDAWD----LFCSLPLKGVKLDARAYNI----MISELCRKDSLS-K 561
Query: 615 ADIIFLELSRLLKHLKDEGYVPDK 638
ADI+F + + +EG+ PD+
Sbjct: 562 ADILF-------RKMTEEGHAPDE 578
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 94/466 (20%), Positives = 189/466 (40%), Gaps = 77/466 (16%)
Query: 79 RNALFVWNSLLSMYSKCGELQDAIKLFDRMPVR----DTVSWNSMISGFLRNRDFDAGFR 134
+ L N+L++ G++ DA+ L DRM + V++ +++ ++
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 135 FFKQMSESRTVYSRFDKATLTTMLSA-CDGPEFSSVSRMIHGLVFVGGFEREITVGNALI 193
++M E + D + ++ C + + + + + GF+ +I N LI
Sbjct: 250 LLRKMEERNI---KLDAVKYSIIIDGLCKDGSLDNAFNLFNEME-IKGFKADIITYNTLI 305
Query: 194 TSYFKCGCFCQGRQVFDEMIER----NVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVS 249
+ G + G ++ +MI+R NVVT++ +I + + +L +M ++
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365
Query: 250 PNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQI 309
PNT+TY S + L E ++ L+ G D+ + L++ Y K ++ ++
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLEL 425
Query: 310 F----------------------------ESAEEL-----------DGVSLTVILVAFAQ 330
F E A++L D VS ++L
Sbjct: 426 FREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD 485
Query: 331 NGFEEEAIQIFTRIVTLGIEVDANM----------VSAVLGVFGVGTSLPLGKQIHSLII 380
NG E+A++IF +I +E+D + S V + + SLPL
Sbjct: 486 NGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPL--------- 536
Query: 381 KKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQK----NSISWNSVIAAFARHGDGS 436
K + N +I+ + L + +F +MT++ + +++N +I A D +
Sbjct: 537 -KGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDAT 595
Query: 437 RALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTR 482
A + EEM+ G P DV+ + ++ +G ++K ++S TR
Sbjct: 596 TAAELIEEMKSSGF-PADVSTVKMVINMLSSGELDKSFLDMLSTTR 640
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 89/408 (21%), Positives = 182/408 (44%), Gaps = 33/408 (8%)
Query: 73 SFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVR----DTVSWNSMISGFLRNRD 128
SF++ N +FV N++LS K G+ +A +L +M R + VS+N+++ G R ++
Sbjct: 435 SFETGLAN-VFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKN 493
Query: 129 FDAGFRFFKQMSESRTVYSRFDKATLTTMLSAC-----DGPEFSSVSRMIHGLVFVGGFE 183
D F + E + + T + ++ C + V+ M + V G
Sbjct: 494 MDLARIVFSNILEKGLKPNNY---TYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNG-- 548
Query: 184 REITVGNALITSYFKCGCFCQGRQVFDEMIER-----NVVTWTAVISGLAQNELYEDGLR 238
V +I K G + R++ MIE + +++ ++I G + + +
Sbjct: 549 ---VVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVA 605
Query: 239 LFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYS 298
+ +M G +SPN +TY S + + + ++ + G++ D+ AL+D +
Sbjct: 606 AYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFC 665
Query: 299 KCGSLEGAWQIF-ESAEELDGVSLTV---ILVAFAQNGFEEEAIQIFTRIVTLGIEVDAN 354
K ++E A +F E EE S + ++ F G A+ ++ +++ G+ D
Sbjct: 666 KRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLG 725
Query: 355 MVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEM 414
+ ++ +L L ++++ + + + ++N SK G+ +++F EM
Sbjct: 726 TYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEM 785
Query: 415 TQKNSIS-----WNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTF 457
+KN+++ +N+VIA R G+ A + ++EM GI P TF
Sbjct: 786 -KKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATF 832
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 98/510 (19%), Positives = 196/510 (38%), Gaps = 100/510 (19%)
Query: 57 LGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSW 116
+ S + ++++ F F+ + R +N LL+ YSK + A+ + ++M D + +
Sbjct: 142 MASVLVSKLVDSAKSFGFEVNSR----AFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPF 197
Query: 117 NSMISGFLRNRDFDAGFRFFKQMSESRTVYSRF-------DKATLTTMLSACDGPE---- 165
+ NR A + ++E++ +YSR D T ++ A E
Sbjct: 198 FPYV-----NRTLSALVQR-NSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAE 251
Query: 166 -FSSVSRMIH---------------------GLVFVGGFEREIT----------VGNALI 193
+SR I L RE+ ++I
Sbjct: 252 ALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVI 311
Query: 194 TSYFKCGCFCQGRQVFDEM----IERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVS 249
+ K G ++ DEM I NVV T++I+G +N L LF +M S
Sbjct: 312 LASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPS 371
Query: 250 PNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQI 309
PN++T+ + + + + + + LG+ + ++ + K E A ++
Sbjct: 372 PNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKL 431
Query: 310 FESAEELDGVSLTV---ILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVG 366
F+ + E ++ V IL + G +EA ++ +++ + GI + + V+
Sbjct: 432 FDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQ 491
Query: 367 TSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKN-------- 418
++ L + + S I++K N + + LI+ + + ++L+V MT N
Sbjct: 492 KNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVY 551
Query: 419 --------------------------------SISWNSVIAAFARHGDGSRALQFYEEMR 446
+S+NS+I F + G+ A+ YEEM
Sbjct: 552 QTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMC 611
Query: 447 VGGIAPTDVTFLSLLHACSHAGLVEKGMEF 476
GI+P +T+ SL++ +++ +E
Sbjct: 612 GNGISPNVITYTSLMNGLCKNNRMDQALEM 641
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 168/394 (42%), Gaps = 55/394 (13%)
Query: 84 VWNSLLSMYSKCGELQDAIKLFDRMP----VRDTVSWNSMISGFLRNRDFDAGFRFFKQM 139
++ +L+ K GE++ A LF M V + ++ +I+G +N GF +++M
Sbjct: 200 IYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKM 259
Query: 140 SESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKC 199
E DG VF + N ++ K
Sbjct: 260 QE--------------------DG-------------VFPN-----LYTYNCVMNQLCKD 281
Query: 200 GCFCQGRQVFDEMIER----NVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTY 255
G QVFDEM ER N+VT+ +I GL + + ++ QM+ ++PN +TY
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341
Query: 256 LSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEE 315
+ + GV L + + L G+ L + L+ + + G GA ++ + EE
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE 401
Query: 316 L----DGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPL 371
V+ T+++ FA++ E+AIQ+ + LG+ D + S ++ F + +
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNE 461
Query: 372 GKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQK----NSISWNSVIA 427
++ +++KN N + N +I Y K G + +L++ EM +K N S+ +I
Sbjct: 462 ASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIE 521
Query: 428 AFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLL 461
+ A + E+M GI P+ + LSL+
Sbjct: 522 VLCKERKSKEAERLVEKMIDSGIDPS-TSILSLI 554
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 88/435 (20%), Positives = 182/435 (41%), Gaps = 22/435 (5%)
Query: 190 NALITSYFKCGCFCQGRQVFDEMIER---NVVTWTAVISGLAQNELYEDGLRLFAQMRGG 246
N L+T F Q F+E + +V ++ +I G + E L ++
Sbjct: 133 NYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEF 192
Query: 247 SVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGA 306
SPN + Y + + C + + + + + KLG+ ++ + L++ K G +
Sbjct: 193 GFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQG 252
Query: 307 WQIFESAEELDGV-----SLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLG 361
++++E +E DGV + ++ ++G ++A Q+F + G+ + + ++G
Sbjct: 253 FEMYEKMQE-DGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIG 311
Query: 362 VFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQK---- 417
L ++ + + N N LI+ + G+L +L + ++ +
Sbjct: 312 GLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSP 371
Query: 418 NSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFL 477
+ +++N +++ F R GD S A + +EM GI P+ VT+ L+ + + +EK ++
Sbjct: 372 SLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLR 431
Query: 478 VSMTRDHRLSPRSEHYACVVDMLGRAGLLKEA----KNFIEGLPENRGVLVWQALLGACS 533
+SM + L P Y+ ++ G + EA K+ +E E V+ +LG C
Sbjct: 432 LSM-EELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCK 490
Query: 534 IHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVG- 592
K + + A + M + E K KE +++M + G+
Sbjct: 491 EGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSI 550
Query: 593 ---VSWIEIDKQVSS 604
+S + D VSS
Sbjct: 551 LSLISRAKNDSHVSS 565
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/295 (19%), Positives = 122/295 (41%), Gaps = 25/295 (8%)
Query: 82 LFVWNSLLSMYSKCGELQDAIKLFDRMPVR----DTVSWNSMISGFLRNRDFDAGFRFFK 137
L+ +N +++ K G +DA ++FD M R + V++N++I G R + +
Sbjct: 268 LYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVD 327
Query: 138 QMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFV-----GGFEREITVGNAL 192
QM L T + DG F V ++ L G + N L
Sbjct: 328 QMKSDGI------NPNLITYNTLIDG--FCGVGKLGKALSLCRDLKSRGLSPSLVTYNIL 379
Query: 193 ITSYFKCGCFCQGRQVFDEMIERNV----VTWTAVISGLAQNELYEDGLRLFAQMRGGSV 248
++ + + G ++ EM ER + VT+T +I A+++ E ++L M +
Sbjct: 380 VSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGL 439
Query: 249 SPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQ 308
P+ TY + + E ++ + + + + I + ++ Y K GS A +
Sbjct: 440 VPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALK 499
Query: 309 IFESAEELD----GVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAV 359
+ + EE + S ++ + +EA ++ +++ GI+ +++S +
Sbjct: 500 LLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 101/442 (22%), Positives = 188/442 (42%), Gaps = 61/442 (13%)
Query: 82 LFVWNSLLSMYSKCGELQDAIKLFDRM------PVRDTVSWNSMISGFLRNRDFDAGFRF 135
L+ +N L++ + +C L A+ L +M P D V+ NS+++GF
Sbjct: 113 LYTYNILINCFCRCSRLSLALALLGKMMKLGYEP--DIVTLNSLLNGFCHGNRISDAVAL 170
Query: 136 FKQMSESRTVYSRFDKATLTTMLSAC-----DGPEFSSVSRMIHGLVFVGGFEREITVGN 190
QM E + + D T TT++ + + RM+ G + ++
Sbjct: 171 VDQMVE---MGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQR-----GCQPDLVTYG 222
Query: 191 ALITSYFKCGCFCQGRQVFDEM----IERNVVTWTAVISGLAQNELYEDGLRLFAQMRGG 246
A++ K G + ++M IE NVV ++ VI L + +D L LF +M
Sbjct: 223 AVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 282
Query: 247 SVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGA 306
V PN +TY SSL++C L G SD S L+
Sbjct: 283 GVRPNVITY-SSLISC---------------LCNYGRWSD---ASRLLS----------- 312
Query: 307 WQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVG 366
+ E + V+ + ++ AF + G +A +++ ++ I+ + S+++ F +
Sbjct: 313 -DMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCML 371
Query: 367 TSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQK----NSISW 422
L KQ+ L+I+K+ N N LIN + K + +++F EM+Q+ N++++
Sbjct: 372 DRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTY 431
Query: 423 NSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTR 482
++I F + D A +++M G+ P +T+ LL G + K M + R
Sbjct: 432 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 491
Query: 483 DHRLSPRSEHYACVVDMLGRAG 504
+ P Y +++ + +AG
Sbjct: 492 S-TMEPDIYTYNIMIEGMCKAG 512
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/314 (20%), Positives = 134/314 (42%), Gaps = 12/314 (3%)
Query: 181 GFEREITVGNALITSYFKCGCFCQGRQVFDEMI----ERNVVTWTAVISGLAQNELYEDG 236
G + N LI + +C + +M+ E ++VT ++++G D
Sbjct: 108 GISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 167
Query: 237 LRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDL 296
+ L QM P+T+T+ + + +E + + + G Q DL A+++
Sbjct: 168 VALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNG 227
Query: 297 YSKCGSLEGAWQIFESAE----ELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVD 352
K G + A + E E + V + ++ + + E++A+ +FT + G+ +
Sbjct: 228 LCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 287
Query: 353 ANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFY 412
S+++ ++ S +I++ + N + LI+ + K G+L + +++
Sbjct: 288 VITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYE 347
Query: 413 EMTQK----NSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAG 468
EM ++ N +++S+I F A Q E M P VT+ +L++ A
Sbjct: 348 EMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAK 407
Query: 469 LVEKGMEFLVSMTR 482
V+KGME M++
Sbjct: 408 RVDKGMELFREMSQ 421
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/470 (21%), Positives = 191/470 (40%), Gaps = 34/470 (7%)
Query: 66 IKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVR-DTVSWNSMISGFL 124
++ PPF NAL S L + D + D + +R D V+ +I+
Sbjct: 292 LEAPPF--------NALL---SCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLC 340
Query: 125 RNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHG---LVFVGG 181
++R D F+QM RT KA + DG V R+ LV +
Sbjct: 341 KSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDG--LCKVGRLKEAEELLVRMKL 398
Query: 182 FEREI---TVGNALITSYFKCGCFCQGRQVFDEM----IERNVVTWTAVISGLAQNELYE 234
ER + N LI Y + G ++V M I+ NVVT ++ G+ ++
Sbjct: 399 EERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLN 458
Query: 235 DGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALM 294
+ F M V N +TY++ + AC V + + + + + G D I AL+
Sbjct: 459 MAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALI 518
Query: 295 DLYSKCGSLEGAWQIFESAEE----LDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIE 350
+ A ++ E +E LD ++ +++ F E+ ++ T + G +
Sbjct: 519 SGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKK 578
Query: 351 VDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQV 410
D+ + ++ FG +++ + + +I+ Y GEL ++L++
Sbjct: 579 PDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKL 638
Query: 411 FYEM-----TQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACS 465
F +M N++ +N +I AF++ G+ +AL EEM++ + P T+ +L +
Sbjct: 639 FKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLN 698
Query: 466 HAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEG 515
E ++ + M + P +++ L + L + + F++G
Sbjct: 699 EKTQGETLLKLMDEMV-EQSCEPNQITMEILMERLSGSDELVKLRKFMQG 747
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 105/492 (21%), Positives = 197/492 (40%), Gaps = 81/492 (16%)
Query: 188 VGNALITSYFKCGCFCQGRQVFDEMIER------NVVTWTAVISGLAQNELY--EDGLRL 239
V N ++ + G +V DEM+++ N +T V+ + + L E + L
Sbjct: 187 VRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIAL 246
Query: 240 FAQMRGGSVSPNTL---TYLSSLMACSGVQALA---------------EGRKIHGLLWKL 281
++ VSPN++ ++SSL C +A E + LL L
Sbjct: 247 ISRFSSHGVSPNSVWLTRFISSL--CKNARANTAWDILSDLMKNKTPLEAPPFNALLSCL 304
Query: 282 GMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIF 341
G D+ S + DL K E D V+L +++ ++ +EA+++F
Sbjct: 305 GRNMDI---SRMNDLVLKMD---------EVKIRPDVVTLGILINTLCKSRRVDEALEVF 352
Query: 342 TRIVTLGIEVDANMVSA--------VLGVFGVGTSLPLGKQIHSLIIKKNFSQ----NPF 389
++ + D N++ A + G+ VG K+ L+++ + N
Sbjct: 353 EQMRGKRTD-DGNVIKADSIHFNTLIDGLCKVGRL----KEAEELLVRMKLEERCVPNAV 407
Query: 390 VSNGLINMYSKCGELHDSLQVFYEMTQK----NSISWNSVIAAFARHGDGSRALQFYEEM 445
N LI+ Y + G+L + +V M + N ++ N+++ RH + A+ F+ +M
Sbjct: 408 TYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDM 467
Query: 446 RVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGL 505
G+ VT+++L+HAC VEK M + M + SP ++ Y ++ L +
Sbjct: 468 EKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKML-EAGCSPDAKIYYALISGLCQVRR 526
Query: 506 LKEAKNFIEGLPE---NRGVLVWQALLGA-CSIHGDSEMGKFAADQLILAAPASSAPHVL 561
+A +E L E + +L + L+G C + ++ + D S +
Sbjct: 527 DHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNT 586
Query: 562 MANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLE 621
+ + + ++ +++M+E G+ V ID S VG E
Sbjct: 587 LISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCS---VG------------E 631
Query: 622 LSRLLKHLKDEG 633
L LK KD G
Sbjct: 632 LDEALKLFKDMG 643
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 103/481 (21%), Positives = 197/481 (40%), Gaps = 77/481 (16%)
Query: 37 LNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCG 96
L+ ++L+ ++GN H +HA +++ ++ + SL+ K G
Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQALVMHAEMLRH--------GLTPSVITYTSLIHSMCKAG 359
Query: 97 ELQDAIKLFDRMPVR----DTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKA 152
+ A++ D+M VR + ++ +++ GF + + +R ++M+++
Sbjct: 360 NMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDN---------- 409
Query: 153 TLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEM 212
GF + NALI + G V ++M
Sbjct: 410 ----------------------------GFSPSVVTYNALINGHCVTGKMEDAIAVLEDM 441
Query: 213 IER----NVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQAL 268
E+ +VV+++ V+SG ++ ++ LR+ +M + P+T+TY S + +
Sbjct: 442 KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRT 501
Query: 269 AEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAF 328
E ++ + ++G+ D +AL++ Y G LE A Q+ E GV V+ +
Sbjct: 502 KEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE-KGVLPDVVTYSV 560
Query: 329 AQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNP 388
NG +++ + + L + + S+P H+LI +N S
Sbjct: 561 LINGLNKQSRTREAKRLLLKLFYEE--------------SVPSDVTYHTLI--ENCSNIE 604
Query: 389 FVS-NGLINMYSKCGELHDSLQVFYEMTQKN----SISWNSVIAAFARHGDGSRALQFYE 443
F S LI + G + ++ QVF M KN ++N +I R GD +A Y+
Sbjct: 605 FKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYK 664
Query: 444 EMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRA 503
EM G VT ++L+ A G V + +V + R LS +E +V++ R
Sbjct: 665 EMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELS-EAEQAKVLVEINHRE 723
Query: 504 G 504
G
Sbjct: 724 G 724
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 96/492 (19%), Positives = 191/492 (38%), Gaps = 53/492 (10%)
Query: 114 VSWNSMISGFLRN-RDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRM 172
+S+N+++ +R+ R+ FK+M ES+ P + + +
Sbjct: 170 LSYNAVLDATIRSKRNISFAENVFKEMLESQV------------------SPNVFTYNIL 211
Query: 173 IHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNEL 232
I G F G + +T+ + + T GC NVVT+ +I G +
Sbjct: 212 IRGFCFAGNIDVALTLFDKMETK----GCL------------PNVVTYNTLIDGYCKLRK 255
Query: 233 YEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESA 292
+DG +L M + PN ++Y + + E + + + G D +
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNT 315
Query: 293 LMDLYSKCGSLEGAW----QIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLG 348
L+ Y K G+ A ++ ++ T ++ + + G A++ ++ G
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG 375
Query: 349 IEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSL 408
+ + + ++ F + ++ + FS + N LIN + G++ D++
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAI 435
Query: 409 QVFYEMTQK----NSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHAC 464
V +M +K + +S+++V++ F R D AL+ EM GI P +T+ SL+
Sbjct: 436 AVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGF 495
Query: 465 SHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVL- 523
++ + M R L P Y +++ G L++A + E +GVL
Sbjct: 496 CEQRRTKEACDLYEEMLRVG-LPPDEFTYTALINAYCMEGDLEKALQLHNEMVE-KGVLP 553
Query: 524 ---VWQALLGACSIHGDSEMGKFAADQLIL--AAPASSAPHVLMANIYSAEGKWKERAGA 578
+ L+ + + K +L + P+ H L+ N + E +K
Sbjct: 554 DVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIE--FKSVVSL 611
Query: 579 IKRMKEKGVAKE 590
IK KG+ E
Sbjct: 612 IKGFCMKGMMTE 623
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/404 (19%), Positives = 157/404 (38%), Gaps = 54/404 (13%)
Query: 205 GRQVFDEMIER----NVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLM 260
VF EM+E NV T+ +I G + L LF +M PN +TY
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTY----- 243
Query: 261 ACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAE----EL 316
+ L+D Y K ++ +++ S E
Sbjct: 244 ------------------------------NTLIDGYCKLRKIDDGFKLLRSMALKGLEP 273
Query: 317 DGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIH 376
+ +S V++ + G +E + T + G +D + ++ + + +H
Sbjct: 274 NLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMH 333
Query: 377 SLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQK----NSISWNSVIAAFARH 432
+ +++ + + LI+ K G ++ +++ +M + N ++ +++ F++
Sbjct: 334 AEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQK 393
Query: 433 GDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEH 492
G + A + EM G +P+ VT+ +L++ G +E + L M ++ LSP
Sbjct: 394 GYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM-KEKGLSPDVVS 452
Query: 493 YACVVDMLGRAGLLKEAKNFIEGLPENRGV----LVWQALL-GACSIHGDSEMGKFAADQ 547
Y+ V+ R+ + EA + E +G+ + + +L+ G C E +
Sbjct: 453 YSTVLSGFCRSYDVDEALRVKREMVE-KGIKPDTITYSSLIQGFCEQRRTKEACDLYEEM 511
Query: 548 LILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEV 591
L + P + + N Y EG ++ M EKGV +V
Sbjct: 512 LRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDV 555
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 182/444 (40%), Gaps = 40/444 (9%)
Query: 66 IKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVR-DTVSWNSMISGFL 124
++ PPF NAL S L + D + D + +R D V+ +I+
Sbjct: 292 LEAPPF--------NALL---SCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLC 340
Query: 125 RNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHG---LVFVGG 181
++R D F+QM RT KA + DG V R+ LV +
Sbjct: 341 KSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDG--LCKVGRLKEAEELLVRMKL 398
Query: 182 FEREI---TVGNALITSYFKCGCFCQGRQVFDEM----IERNVVTWTAVISGLAQNELYE 234
ER + N LI Y + G ++V M I+ NVVT ++ G+ ++
Sbjct: 399 EERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLN 458
Query: 235 DGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALM 294
+ F M V N +TY++ + AC V + + + + + G D I AL+
Sbjct: 459 MAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALI 518
Query: 295 DLYSKCGSLEGAWQIFESAEE----LDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIE 350
+ A ++ E +E LD ++ +++ F E+ ++ T + G +
Sbjct: 519 SGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKK 578
Query: 351 VDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQV 410
D+ + ++ FG +++ + + +I+ Y GEL ++L++
Sbjct: 579 PDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKL 638
Query: 411 FYEM-----TQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACS 465
F +M N++ +N +I AF++ G+ +AL EEM++ + P T+ +L +
Sbjct: 639 FKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLN 698
Query: 466 HA-------GLVEKGMEFLVSMTR 482
L+++ +E LV+ R
Sbjct: 699 EKTQGETLLKLMDEMVEHLVNQIR 722
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 105/492 (21%), Positives = 197/492 (40%), Gaps = 81/492 (16%)
Query: 188 VGNALITSYFKCGCFCQGRQVFDEMIER------NVVTWTAVISGLAQNELY--EDGLRL 239
V N ++ + G +V DEM+++ N +T V+ + + L E + L
Sbjct: 187 VRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIAL 246
Query: 240 FAQMRGGSVSPNTL---TYLSSLMACSGVQALA---------------EGRKIHGLLWKL 281
++ VSPN++ ++SSL C +A E + LL L
Sbjct: 247 ISRFSSHGVSPNSVWLTRFISSL--CKNARANTAWDILSDLMKNKTPLEAPPFNALLSCL 304
Query: 282 GMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIF 341
G D+ S + DL K E D V+L +++ ++ +EA+++F
Sbjct: 305 GRNMDI---SRMNDLVLKMD---------EVKIRPDVVTLGILINTLCKSRRVDEALEVF 352
Query: 342 TRIVTLGIEVDANMVSA--------VLGVFGVGTSLPLGKQIHSLIIKKNFSQ----NPF 389
++ + D N++ A + G+ VG K+ L+++ + N
Sbjct: 353 EQMRGKRTD-DGNVIKADSIHFNTLIDGLCKVGRL----KEAEELLVRMKLEERCVPNAV 407
Query: 390 VSNGLINMYSKCGELHDSLQVFYEMTQK----NSISWNSVIAAFARHGDGSRALQFYEEM 445
N LI+ Y + G+L + +V M + N ++ N+++ RH + A+ F+ +M
Sbjct: 408 TYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDM 467
Query: 446 RVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGL 505
G+ VT+++L+HAC VEK M + M + SP ++ Y ++ L +
Sbjct: 468 EKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKML-EAGCSPDAKIYYALISGLCQVRR 526
Query: 506 LKEAKNFIEGLPE---NRGVLVWQALLGA-CSIHGDSEMGKFAADQLILAAPASSAPHVL 561
+A +E L E + +L + L+G C + ++ + D S +
Sbjct: 527 DHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNT 586
Query: 562 MANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLE 621
+ + + ++ +++M+E G+ V ID S VG E
Sbjct: 587 LISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCS---VG------------E 631
Query: 622 LSRLLKHLKDEG 633
L LK KD G
Sbjct: 632 LDEALKLFKDMG 643
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 96/469 (20%), Positives = 191/469 (40%), Gaps = 64/469 (13%)
Query: 37 LNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCG 96
L+H + + + GR+ S+ A+++ + P + R + ++L YS+ G
Sbjct: 173 LDHQVIEIFVRILGRESQY----SVAAKLLDKIPLQEYLLDVR----AYTTILHAYSRTG 224
Query: 97 ELQDAIKLFDRM----PVRDTVSWNSMISGFLR-NRDFDAGFRFFKQMSESRTVYSRFDK 151
+ + AI LF+RM P V++N ++ F + R + + + E R+ +FD+
Sbjct: 225 KYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWR---KILGVLDEMRSKGLKFDE 281
Query: 152 ATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDE 211
T +T+LSAC ++ + G+E NAL+ + K G + + V E
Sbjct: 282 FTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKE 341
Query: 212 MIERNV----VTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQA 267
M E + VT+ +++ + ++ + M V PN +TY
Sbjct: 342 MEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITY------------ 389
Query: 268 LAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLT----V 323
+ ++D Y K G + A ++F S +E V T
Sbjct: 390 -----------------------TTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNA 426
Query: 324 ILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKN 383
+L + E I++ + + G + + +L + G ++ +
Sbjct: 427 VLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCG 486
Query: 384 FSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKN----SISWNSVIAAFARHGDGSRAL 439
F + N LI+ Y +CG D+ +++ EMT+ ++N+++ A AR GD
Sbjct: 487 FEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGE 546
Query: 440 QFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSP 488
+M+ G PT+ ++ SL+ C G G+E + + ++ ++ P
Sbjct: 547 NVISDMKSKGFKPTETSY-SLMLQCYAKGGNYLGIERIENRIKEGQIFP 594
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 99/448 (22%), Positives = 190/448 (42%), Gaps = 52/448 (11%)
Query: 80 NALFVWNSLLSMYSKCGELQDAIKLFDRMP----VRDTVSWNSMISGFLRNRDFDAGFRF 135
NA+ + +++ Y K G+ +A+KLF M V +T ++N+++S + +
Sbjct: 385 NAI-TYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSN---EM 440
Query: 136 FKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITS 195
K + + ++ ++AT TML+ C + + GFE + N LI++
Sbjct: 441 IKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISA 500
Query: 196 YFKCGCFCQGRQVFDEMIERN----VVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPN 251
Y +CG +++ EM V T+ A+++ LA+ + G + + M+ P
Sbjct: 501 YGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPT 560
Query: 252 TLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFE 311
+Y SLM +Q A+G LG++ IE+ + K G + +W +
Sbjct: 561 ETSY--SLM----LQCYAKGGNY------LGIER---IENRI-----KEGQIFPSWMLLR 600
Query: 312 SAEELDGVSLTVILVAFAQNGF--EEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSL 369
T++L F E A +F + G + D + +++L +F
Sbjct: 601 ----------TLLLANFKCRALAGSERAFTLFKK---HGYKPDMVIFNSMLSIFTRNNMY 647
Query: 370 PLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQK----NSISWNSV 425
+ I I + S + N L++MY + GE + ++ + + + +S+N+V
Sbjct: 648 DQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTV 707
Query: 426 IAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHR 485
I F R G A++ EM GI P T+ + + + G+ + + + M ++
Sbjct: 708 IKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKND- 766
Query: 486 LSPRSEHYACVVDMLGRAGLLKEAKNFI 513
P + VVD RAG EA +F+
Sbjct: 767 CRPNELTFKMVVDGYCRAGKYSEAMDFV 794
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 122/284 (42%), Gaps = 23/284 (8%)
Query: 277 LLWKLGMQS---DLCIESALMDLYSKCGSLEGAWQIFESAEELDG----VSLTVILVAFA 329
LL K+ +Q D+ + ++ YS+ G E A +FE +E+ V+ VIL F
Sbjct: 197 LLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFG 256
Query: 330 QNGFE-EEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNP 388
+ G + + + + + G++ D S VL L K+ + + +
Sbjct: 257 KMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGT 316
Query: 389 FVSNGLINMYSKCGELHDSLQVFYEMTQK----NSISWNSVIAAFARHGDGSRALQFYEE 444
N L+ ++ K G ++L V EM + +S+++N ++AA+ R G A E
Sbjct: 317 VTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEM 376
Query: 445 MRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAG 504
M G+ P +T+ +++ A AG ++ ++ SM ++ P + Y V+ +LG+
Sbjct: 377 MTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSM-KEAGCVPNTCTYNAVLSLLGKKS 435
Query: 505 LLKEAKNFI-----EGLPENRGVLVWQALLGACSIHGDSEMGKF 543
E + G NR W +L C G+ M KF
Sbjct: 436 RSNEMIKMLCDMKSNGCSPNRA--TWNTMLALC---GNKGMDKF 474
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/295 (20%), Positives = 124/295 (42%), Gaps = 42/295 (14%)
Query: 303 LEGAWQIFESAE-ELDGVSLTVILVAFAQNGFEEEAIQIFTRIV----TLGIEVDANMVS 357
L G + F+S + EL L ++ +G E A+ +F +V + +++D ++
Sbjct: 120 LTGLSRFFDSVKSELLRTDLVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIE 179
Query: 358 AVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQK 417
+ + G + + ++ I + + + +++ YS+ G+ ++ +F M +
Sbjct: 180 IFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEM 239
Query: 418 NS----ISWNSVIAAFARHGDGSRA-LQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEK 472
+++N ++ F + G R L +EMR G+ + T ++L AC+ GL+ +
Sbjct: 240 GPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLRE 299
Query: 473 GMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQALLGAC 532
EF + + P + Y ++ + G+AG+ EA + ++ + EN
Sbjct: 300 AKEFFAEL-KSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEEN------------- 345
Query: 533 SIHGDSEMGKFAADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGV 587
+ PA S + + Y G KE AG I+ M +KGV
Sbjct: 346 ------------------SCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGV 382
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 97/476 (20%), Positives = 196/476 (41%), Gaps = 26/476 (5%)
Query: 76 SSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVR----DTVSWNSMISGFLRNRDFDA 131
SS + ++N + + K G++ A K F + D V++ SMI + D
Sbjct: 232 SSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDE 291
Query: 132 GFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNA 191
F+ + ++R V + A T ++ +F ++ G I N
Sbjct: 292 AVEMFEHLEKNRRVPCTY--AYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAY-NC 348
Query: 192 LITSYFKCGCFCQGRQVFDEMIER---NVVTWTAVISGLAQNELYEDGLRLFAQMRGGSV 248
++T K G + +VF+EM + N+ T+ +I L + + L M+ +
Sbjct: 349 ILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGL 408
Query: 249 SPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQ 308
PN T + Q L E + + D +L+D K G ++ A++
Sbjct: 409 FPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYK 468
Query: 309 IFESAEELDGVSLTVILVAFAQNGF----EEEAIQIFTRIVTLGIEVDANMVSAVLGVFG 364
++E + D + +++ + +N F +E+ +I+ ++ D +++ +
Sbjct: 469 VYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMF 528
Query: 365 VGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSI---- 420
G+ + I + F + + LI+ K G +++ ++FY M ++ +
Sbjct: 529 KAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTR 588
Query: 421 SWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSM 480
++N VI F + G ++A Q EEM+ G PT VT+ S++ + +++ L
Sbjct: 589 AYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAY-MLFEE 647
Query: 481 TRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIE-----GLPENRGVLVWQALLGA 531
+ R+ Y+ ++D G+ G + EA +E GL N + W +LL A
Sbjct: 648 AKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPN--LYTWNSLLDA 701
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 111/542 (20%), Positives = 214/542 (39%), Gaps = 39/542 (7%)
Query: 81 ALFVWNSLLSMYSKCGELQDAIKLFDRMP---VRDTVSWNSMISGFLRNRDFDAGFRFFK 137
++ +N +L+ K G++ +A+K+F+ M + ++N +I R D F
Sbjct: 342 SVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRD 401
Query: 138 QMSES------RTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNA 191
M ++ RTV D+ C + M + + EIT +
Sbjct: 402 SMQKAGLFPNVRTVNIMVDRL--------CKSQKLDEACAMFEEMDYKVCTPDEITFC-S 452
Query: 192 LITSYFKCGCFCQGRQVFDEMIE----RNVVTWTAVISGLAQNELYEDGLRLFAQMRGGS 247
LI K G +V+++M++ N + +T++I + EDG +++ M +
Sbjct: 453 LIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQN 512
Query: 248 VSPNTLTYLSSLMACSGVQALAE-GRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGA 306
SP+ L L++ M C E GR + + D S L+ K G
Sbjct: 513 CSPD-LQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANET 571
Query: 307 WQIFESAEE----LDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGV 362
+++F S +E LD + +++ F + G +A Q+ + T G E +V+
Sbjct: 572 YELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDG 631
Query: 363 FGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQK----N 418
L + K N + + LI+ + K G + ++ + E+ QK N
Sbjct: 632 LAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPN 691
Query: 419 SISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLV 478
+WNS++ A + + + AL ++ M+ P VT+ L++ K F
Sbjct: 692 LYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQ 751
Query: 479 SMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGV---LVWQALLGACSIH 535
M + + P + Y ++ L +AG + EA + N GV + A++ S +
Sbjct: 752 EMQK-QGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLS-N 809
Query: 536 GDSEMGKFA--ADQLILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGV 593
G+ M F+ + P + V++ + ++ A ++E G A+
Sbjct: 810 GNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETGKARHAAR 869
Query: 594 SW 595
SW
Sbjct: 870 SW 871
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/476 (19%), Positives = 193/476 (40%), Gaps = 36/476 (7%)
Query: 71 FFSFDSSRR-NALFVWNSLLSMYSKCGELQDAIKLFDRMPVRDTV----SWNSMISGFLR 125
F + +RR + +N+++ Y G+ +A L +R + ++ ++N +++ +
Sbjct: 296 FEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRK 355
Query: 126 NRDFDAGFRFFKQMS-ESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFER 184
D + F++M ++ S ++ L ML C + + + + G F
Sbjct: 356 MGKVDEALKVFEEMKKDAAPNLSTYN--ILIDML--CRAGKLDTAFELRDSMQKAGLFPN 411
Query: 185 EITVGNALITSYFKCGCFCQGRQVFDEMIER----NVVTWTAVISGLAQNELYEDGLRLF 240
TV N ++ K + +F+EM + + +T+ ++I GL + +D +++
Sbjct: 412 VRTV-NIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVY 470
Query: 241 AQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKC 300
+M N++ Y S + +G KI+ + DL + + MD K
Sbjct: 471 EKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKA 530
Query: 301 GSLEGAWQIFESAEEL----DGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMV 356
G E +FE + D S ++++ + GF E ++F + G +D
Sbjct: 531 GEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAY 590
Query: 357 SAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQ 416
+ V+ F + Q+ + K F +I+ +K L ++ +F E
Sbjct: 591 NIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 650
Query: 417 K----NSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEK 472
K N + ++S+I F + G A EE+ G+ P T+ SLL A A + +
Sbjct: 651 KRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINE 710
Query: 473 GMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQAL 528
+ SM ++ + +P Y +++ GL K + F N+ + WQ +
Sbjct: 711 ALVCFQSM-KELKCTPNQVTYGILIN-----GLCK-VRKF------NKAFVFWQEM 753
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 98/470 (20%), Positives = 190/470 (40%), Gaps = 34/470 (7%)
Query: 66 IKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPVR-DTVSWNSMISGFL 124
++ PPF NAL S L + D + D + +R D V+ +I+
Sbjct: 292 LEAPPF--------NALL---SCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLC 340
Query: 125 RNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHG---LVFVGG 181
++R D F++M RT KA + DG V R+ LV +
Sbjct: 341 KSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDG--LCKVGRLKEAEELLVRMKL 398
Query: 182 FER---EITVGNALITSYFKCGCFCQGRQVFDEM----IERNVVTWTAVISGLAQNELYE 234
ER N LI Y + G ++V M I+ NVVT ++ G+ ++
Sbjct: 399 EERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLN 458
Query: 235 DGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALM 294
+ F M V N +TY++ + AC V + + + + + G D I AL+
Sbjct: 459 MAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALI 518
Query: 295 DLYSKCGSLEGAWQIFESAEE----LDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIE 350
+ A ++ E +E LD ++ +++ F E+ ++ T + G +
Sbjct: 519 SGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKK 578
Query: 351 VDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQV 410
D+ + ++ FG +++ + + +I+ Y GEL ++L++
Sbjct: 579 PDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKL 638
Query: 411 FYEM-----TQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACS 465
F +M N++ +N +I AF++ G+ +AL EEM++ + P T+ +L +
Sbjct: 639 FKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLN 698
Query: 466 HAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEG 515
E ++ + M + P +++ L + L + + F++G
Sbjct: 699 EKTQGETLLKLMDEMV-EQSCEPNQITMEILMERLSGSDELVKLRKFMQG 747
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 104/488 (21%), Positives = 198/488 (40%), Gaps = 73/488 (14%)
Query: 188 VGNALITSYFKCGCFCQGRQVFDEMIER------NVVTWTAVISGLAQNELY--EDGLRL 239
V N ++ + G +V DEM+++ N +T V+ + + L E + L
Sbjct: 187 VRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIAL 246
Query: 240 FAQMRGGSVSPNTL---TYLSSLMACSGVQALA---------------EGRKIHGLLWKL 281
++ VSPN++ ++SSL C +A A E + LL L
Sbjct: 247 ISRFSSHGVSPNSVWLTRFISSL--CKNARANAAWDILSDLMKNKTPLEAPPFNALLSCL 304
Query: 282 GMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIF 341
G D+ S + DL K E D V+L +++ ++ +EA+++F
Sbjct: 305 GRNMDI---SRMNDLVLKMD---------EVKIRPDVVTLGILINTLCKSRRVDEALEVF 352
Query: 342 TRIVTLGIEVDANMVSA--------VLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNG 393
++ + D N++ A + G+ VG + + + +++ + N N
Sbjct: 353 EKMRGKRTD-DGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNC 411
Query: 394 LINMYSKCGELHDSLQVFYEMTQK----NSISWNSVIAAFARHGDGSRALQFYEEMRVGG 449
LI+ Y + G+L + +V M + N ++ N+++ RH + A+ F+ +M G
Sbjct: 412 LIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEG 471
Query: 450 IAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEA 509
+ VT+++L+HAC VEK M + M + SP ++ Y ++ L + +A
Sbjct: 472 VKGNVVTYMTLIHACCSVSNVEKAMYWYEKML-EAGCSPDAKIYYALISGLCQVRRDHDA 530
Query: 510 KNFIEGLPE---NRGVLVWQALLGA-CSIHGDSEMGKFAADQLILAAPASSAPHVLMANI 565
+E L E + +L + L+G C + ++ + D S + + +
Sbjct: 531 IRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISF 590
Query: 566 YSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRL 625
+ ++ +++M+E G+ V ID S VG EL
Sbjct: 591 FGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCS---VG------------ELDEA 635
Query: 626 LKHLKDEG 633
LK KD G
Sbjct: 636 LKLFKDMG 643
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 101/533 (18%), Positives = 221/533 (41%), Gaps = 36/533 (6%)
Query: 99 QDAIKLFDRM----PVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATL 154
DAI LF M P+ V ++ S R + F+ F KQ+ + ++ + +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 155 TTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIE 214
C F+ + G V G+E + T N LI F G + + D M+E
Sbjct: 130 INCFCRCCKTCFAYS---VLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 186
Query: 215 R----NVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAE 270
+VVT+ ++++G+ ++ L L +M +V + TY + + + +
Sbjct: 187 NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 246
Query: 271 GRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFES--AEEL--DGVSLTVILV 326
+ + G++S + ++L+ K G + + + E+ + ++ V+L
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Query: 327 AFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQ 386
F + G +EA +++ ++T GI + + ++ + + L + L+++ S
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366
Query: 387 NPFVSNGLINMYSKCGELHDSLQVFYEMTQK----NSISWNSVIAAFARHGDGSRALQFY 442
+ LI Y + D ++VF ++++ N+++++ ++ F + G A + +
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 443 EEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGR 502
+EM G+ P +T+ LL G +EK +E + + ++ Y +++ + +
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK-SKMDLGIVMYTTIIEGMCK 485
Query: 503 AGLLKEAKNFIEGLP---ENRGVLVWQALLGACSIHGDSEMGKFAADQLILA-------A 552
G +++A N LP V+ + + I G + G + ++L A
Sbjct: 486 GGKVEDAWNLFCSLPCKGVKPNVMTYTVM-----ISGLCKKGSLSEANILLRKMEEDGNA 540
Query: 553 PASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSF 605
P + L+ + +G A I+ MK G + + + ID +S+
Sbjct: 541 PNDCTYNTLI-RAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAM 592
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/392 (20%), Positives = 176/392 (44%), Gaps = 31/392 (7%)
Query: 82 LFVWNSLLSMYSKCGELQDAIKLFDRMPVR----DTVSWNSMISGFLRNRDFDAGFRFFK 137
+ +NS+++ + G+ A+ L +M R D +++++I R+ DA FK
Sbjct: 193 VVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFK 252
Query: 138 QMSESRTVYSRFDKATLTTMLSA-CDGPEFSSVSRMIHGLVFVGGFEREITVG----NAL 192
+M E++ + S T +++ C +++ + ++ +V REI N L
Sbjct: 253 EM-ETKGIKSSV--VTYNSLVRGLCKAGKWNDGALLLKDMV-----SREIVPNVITFNVL 304
Query: 193 ITSYFKCGCFCQGRQVFDEMIER----NVVTWTAVISGLA-QNELYEDGLRLFAQMRGGS 247
+ + K G + +++ EMI R N++T+ ++ G QN L E L +R
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN-K 363
Query: 248 VSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAW 307
SP+ +T+ S + V+ + +G K+ + K G+ ++ S L+ + + G ++ A
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423
Query: 308 QIFESAEE----LDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVF 363
++F+ D ++ ++L NG E+A++IF + +++ M + ++
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483
Query: 364 GVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQK----NS 419
G + + + K N +I+ K G L ++ + +M + N
Sbjct: 484 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPND 543
Query: 420 ISWNSVIAAFARHGDGSRALQFYEEMRVGGIA 451
++N++I A R GD + + + EEM+ G +
Sbjct: 544 CTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 575
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 119/292 (40%), Gaps = 25/292 (8%)
Query: 31 ATSESVLNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQ--PPFFSFDSSRRNALFVWNSL 88
+ E V N + LL V ++G L + ++ +I + P + +N+L
Sbjct: 290 VSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP----------NIITYNTL 339
Query: 89 LSMYSKCGELQDAIKLFDRMPVR-----DTVSWNSMISGFLRNRDFDAGFRFFKQMSESR 143
+ Y L +A + D M VR D V++ S+I G+ + D G + F+ +S+
Sbjct: 340 MDGYCMQNRLSEANNMLDLM-VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG 398
Query: 144 TVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFC 203
V + + L C + + +V G +T G L+ G
Sbjct: 399 LVANAVTYSILVQ--GFCQSGKIKLAEELFQEMVSHGVLPDVMTYG-ILLDGLCDNGKLE 455
Query: 204 QGRQVFDEM----IERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSL 259
+ ++F+++ ++ +V +T +I G+ + ED LF + V PN +TY +
Sbjct: 456 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515
Query: 260 MACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFE 311
+L+E + + + G + C + L+ + + G L + ++ E
Sbjct: 516 SGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIE 567
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 117/563 (20%), Positives = 239/563 (42%), Gaps = 71/563 (12%)
Query: 31 ATSESVLNHAHLSSLLSVCGRDGNLHLGSSIHARIIKQ---PPFFSFDSSRRNALFVWNS 87
A S L+ ++++ G+ G + S R++++ P +F N+
Sbjct: 290 ADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTF-----------NT 338
Query: 88 LLSMYSKCGELQDAIKLFDRMPVR---DTVSWNSMISGFLRNRDFDAGFRFFKQMSES-- 142
++ +Y G+L + L M + DT ++N +IS +N D + +FK+M +
Sbjct: 339 MIHIYGNNGQLGEVTSLMKTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGL 398
Query: 143 -------RTVYSRFDKATLTTMLSACDG------------PEF--SSVSRMIHGLVFV-- 179
RT+ F ++ M+ +G E+ S+++RM +
Sbjct: 399 KPDPVSYRTLLYAF---SIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEK 455
Query: 180 --GGFEREITVGN-------ALITSYFKCGCFCQGRQVF---DEMIERNVVTWTAVISGL 227
F+R GN A I +Y + G + +VF E+ +R V+ + +I
Sbjct: 456 SWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAY 515
Query: 228 AQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDL 287
++ E LF M V+P+ TY + + + +GR + + G SD
Sbjct: 516 GISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDC 575
Query: 288 CIESALMDLYSKCGSLEGAWQIF----ESAEELDGVSLTVILVAFAQNGFEEEAIQIFTR 343
A++ + K G L A +++ E E D V V++ AFA G ++A+
Sbjct: 576 IPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEA 635
Query: 344 IVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKK-NFSQNP--FVSNGLINMYSK 400
+ GI ++ + ++++ ++ L + I+ +++ N +Q P + SN +IN+YS+
Sbjct: 636 MKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSE 695
Query: 401 CGELHDSLQVFYEMTQK---NSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTF 457
+ + +F M Q+ N ++ ++ + ++G A Q ++MR I +++
Sbjct: 696 RSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSY 755
Query: 458 LSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLP 517
S+L + G ++ +E M + P + + +L + G+ K+A IE +
Sbjct: 756 NSVLGLFALDGRFKEAVETFKEMVSSG-IQPDDSTFKSLGTILMKLGMSKKAVRKIEEIR 814
Query: 518 E---NRGVLVWQALLGACSIHGD 537
+ RG+ +W + L + GD
Sbjct: 815 KKEIKRGLELWISTLSSLVGIGD 837
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 98/229 (42%), Gaps = 47/229 (20%)
Query: 271 GRKIHGLLW-----KLGMQSDLCIESALMDLYSKCGSLEGAWQIFE--SAEE-------- 315
G K+H L W K+GMQ D ++ +Y K + A + F+ S +E
Sbjct: 236 GLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVC 295
Query: 316 LDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQI 375
L + ++ + ++G +EA + F R++ GI V T++ I
Sbjct: 296 LSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGI---------------VPTTVTFNTMI 340
Query: 376 HSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAFARHGDG 435
H + +NG + GE+ ++ ++ ++N +I+ ++ D
Sbjct: 341 H-----------IYGNNGQL------GEVTSLMKTMKLHCAPDTRTYNILISLHTKNNDI 383
Query: 436 SRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDH 484
RA +++EM+ G+ P V++ +LL+A S +VE+ + M D+
Sbjct: 384 ERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDN 432
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 120/587 (20%), Positives = 232/587 (39%), Gaps = 78/587 (13%)
Query: 84 VWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESR 143
V+N L S Y KC + + S++ +I ++R+R G FK M
Sbjct: 140 VFNVLFSCYEKC-------------KLSSSSSFDLLIQHYVRSRRVLDGVLVFKMM---- 182
Query: 144 TVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALI---------- 193
T ++L PE ++S ++HGLV F + + N ++
Sbjct: 183 --------ITKVSLL-----PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYI 229
Query: 194 -TSYFKCGCFCQGRQVFDEMI--------ERNVVTWTAVISGLAQNELYEDGLRLFAQMR 244
T + C + EMI + N+V + +I GL + + + + + +
Sbjct: 230 YTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLA 289
Query: 245 GGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLE 304
G + P+ +TY + + VQ G ++ + L S+L++ K G +E
Sbjct: 290 GKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIE 349
Query: 305 GAWQIFESAEELDGVS-----LTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAV 359
A + + + GVS ++ + + EA +F R+ +G+ + S +
Sbjct: 350 EALNLVKRVVDF-GVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSIL 408
Query: 360 LGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQK-- 417
+ +F L ++ + + N LIN + K G++ + EM K
Sbjct: 409 IDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKL 468
Query: 418 --NSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGME 475
+++ S++ + G ++AL+ Y EM GIAP+ TF +LL AGL+ ++
Sbjct: 469 EPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVK 528
Query: 476 FLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVL----VWQALLGA 531
M + + P Y +++ G + +A F++ + E +G++ ++ L+
Sbjct: 529 LFNEMA-EWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTE-KGIVPDTYSYRPLIHG 586
Query: 532 CSIHGDSEMGKFAADQLILA-APASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKE 590
+ G + K D L + + + + + EGK +E + M ++GV +
Sbjct: 587 LCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLD 646
Query: 591 VGVSWIEIDKQVSSFVVGDKLHPQADIIFLELSRLLKHLKDEGYVPD 637
+ + ID G H + F LLK + D G PD
Sbjct: 647 LVCYGVLID--------GSLKHKDRKLFF----GLLKEMHDRGLKPD 681
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 103/465 (22%), Positives = 188/465 (40%), Gaps = 102/465 (21%)
Query: 81 ALFVWNSLLSMYSKCGELQDAIKLFDRM------PVRDTVSWNSMISGFLRNRDFDAGFR 134
+++ + +LLS + G ++DA+KLF+ M P R V++N MI G+ D F
Sbjct: 506 SIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNR--VTYNVMIEGYCEEGDMSKAFE 563
Query: 135 FFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALIT 194
F K+M+E V P+ S +IHGL G + + +
Sbjct: 564 FLKEMTEKGIV------------------PDTYSYRPLIHGLCLTG----QASEAKVFVD 601
Query: 195 SYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLT 254
K C E N + +T ++ G + E+ L + +M V +
Sbjct: 602 GLHKGNC------------ELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLD--- 646
Query: 255 YLSSLMACSGVQALAEGRKIH-------GLLWKL---GMQSDLCIESALMDLYSKCGSLE 304
+ C GV L +G H GLL ++ G++ D I ++++D SK G +
Sbjct: 647 -----LVCYGV--LIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFK 699
Query: 305 GAWQIFE----SAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVL 360
A+ I++ + V+ T ++ + GF EA + +++ VS+V
Sbjct: 700 EAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKM---------QPVSSVP 750
Query: 361 GVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSI 420
G L + ++ G ++M K ELH+++ + N+
Sbjct: 751 NQVTYGCFLDI------------------LTKGEVDM-QKAVELHNAI---LKGLLANTA 788
Query: 421 SWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSM 480
++N +I F R G A + M G++P +T+ ++++ V+K +E SM
Sbjct: 789 TYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSM 848
Query: 481 T----RDHRLSPRSE-HYACVVDMLGRAGLLKEAKNFIEGLPENR 520
T R R++ + H CV +G+A L+ +P N+
Sbjct: 849 TEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNK 893
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 99/444 (22%), Positives = 182/444 (40%), Gaps = 67/444 (15%)
Query: 82 LFVWNSLLSMYSKCGELQDAIKLFDRM---PVR-DTVSWNSMISGFLRNRDFDAGFRFFK 137
LFV+N+L+ K + +A LFDRM +R + V+++ +I F R D F
Sbjct: 367 LFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLG 426
Query: 138 QMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYF 197
+M ++ S + +L C + S+ + ++ E + +L+ Y
Sbjct: 427 EMVDTGLKLSVYPYNSLIN--GHCKFGDISAAEGFMAEMIN-KKLEPTVVTYTSLMGGYC 483
Query: 198 KCGCFCQGRQVFDEM----IERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTL 253
G + +++ EM I ++ T+T ++SGL + L D ++LF +M +V PN +
Sbjct: 484 SKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRV 543
Query: 254 TYLSSLMACSGVQALAEGRKIHGLLWK-LGMQSDLCIESALMDLYSKCGSLEGAWQIFES 312
TY + EG G + K ++ + + D YS + G ++
Sbjct: 544 TY----------NVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQA 593
Query: 313 AE-------------ELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAV 359
+E EL+ + T +L F + G EEA+ + +V G+++D
Sbjct: 594 SEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLD------- 646
Query: 360 LGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNS 419
L +GV L + L GL+ E+HD + +
Sbjct: 647 LVCYGVLIDGSLKHKDRKLFF------------GLLK------EMHD------RGLKPDD 682
Query: 420 ISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVS 479
+ + S+I A ++ GD A ++ M G P +VT+ ++++ AG V + E L S
Sbjct: 683 VIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEA-EVLCS 741
Query: 480 MTRDHRLSPRSEHYACVVDMLGRA 503
+ P Y C +D+L +
Sbjct: 742 KMQPVSSVPNQVTYGCFLDILTKG 765
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/411 (19%), Positives = 185/411 (45%), Gaps = 28/411 (6%)
Query: 82 LFVWNSLLSMYSKCGELQDAIKLFDRMPV----RDTVSWNSMISGFLRNRDFDAGFRFFK 137
L + ++++ K G++ A+ L +M D V +N++I G + + D F
Sbjct: 223 LVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFT 282
Query: 138 QMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVG----NALI 193
+M F ++L + L C+ +S SR++ ++ ER+I +ALI
Sbjct: 283 EMDNKGIRPDVFTYSSLISCL--CNYGRWSDASRLLSDMI-----ERKINPNVVTFSALI 335
Query: 194 TSYFKCGCFCQGRQVFDEMIER----NVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVS 249
++ K G + +++DEMI+R ++ T++++I+G ++ ++ +F M
Sbjct: 336 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 395
Query: 250 PNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQI 309
PN +TY + + + + EG ++ + + G+ + + L+ + + + A +
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 455
Query: 310 FESAEEL----DGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGV 365
F+ + + ++ ++L +NG +A+ +F + +E D + ++
Sbjct: 456 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 515
Query: 366 GTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQK----NSIS 421
+ G ++ + K S N N +I+ + + G ++ + +M + NS +
Sbjct: 516 AGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGT 575
Query: 422 WNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEK 472
+N++I A R GD + + +EMR G A D + + L+ H G ++K
Sbjct: 576 YNTLIRARLRDGDREASAELIKEMRSCGFA-GDASTIGLVTNMLHDGRLDK 625
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 109/522 (20%), Positives = 213/522 (40%), Gaps = 84/522 (16%)
Query: 82 LFVWNSLLSMYSKCGELQDAIKLFDRMPVR----DTVSWNSMISG-FLRNRDFDAGFRFF 136
+ +SLL+ Y + DA+ L D+M DT ++ ++I G FL N+ +A
Sbjct: 153 IVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEA----- 207
Query: 137 KQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSY 196
A + M+ P+ + +++GL G +I + +L+
Sbjct: 208 --------------VALVDQMVQRGCQPDLVTYGTVVNGLCKRG----DIDLALSLLKKM 249
Query: 197 FKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYL 256
K G+ IE +VV + +I GL + + +D L LF +M + P+ TY
Sbjct: 250 EK------GK------IEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTY- 296
Query: 257 SSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEEL 316
SSL++C L G SD S L+ + E
Sbjct: 297 SSLISC---------------LCNYGRWSD---ASRLLS------------DMIERKINP 326
Query: 317 DGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIH 376
+ V+ + ++ AF + G EA +++ ++ I+ D S+++ F + L K +
Sbjct: 327 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 386
Query: 377 SLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQK----NSISWNSVIAAFARH 432
L+I K+ N + LI + K + + +++F EM+Q+ N++++ ++I F +
Sbjct: 387 ELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQA 446
Query: 433 GDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEH 492
D A +++M G+ P +T+ LL G + K M + R + P
Sbjct: 447 RDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR-STMEPDIYT 505
Query: 493 YACVVDMLGRAGLLKEAKNF-----IEGLPENRGVLVWQALLGACSIHGDSEMGKFAADQ 547
Y +++ + +AG +++ ++G+ N V+ + ++ G E +
Sbjct: 506 YNIMIEGMCKAGKVEDGWELFCNLSLKGVSPN--VIAYNTMISGFCRKGSKEEADSLLKK 563
Query: 548 LILAAP-ASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVA 588
+ P +S + + +G + A IK M+ G A
Sbjct: 564 MKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFA 605
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 101/518 (19%), Positives = 216/518 (41%), Gaps = 40/518 (7%)
Query: 97 ELQDAIKLFDRM----PVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKA 152
++ DA+ LF M P V +N ++S + F+ +QM +T+ D
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM---QTLGISHDLY 119
Query: 153 TLTTMLSA-CDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDE 211
T + ++ C + S ++ ++ +G +E +I ++L+ Y + D+
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLG-YEPDIVTLSSLLNGYCHSKRISDAVALVDQ 178
Query: 212 MIER----NVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQA 267
M+E + T+T +I GL + + + L QM P+ +TY + +
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 268 LAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEEL----DGVSLTV 323
+ + + K +++D+ I + ++D K ++ A +F + D + +
Sbjct: 239 IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSS 298
Query: 324 ILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKN 383
++ G +A ++ + ++ I + SA++ F L ++++ +IK++
Sbjct: 299 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 358
Query: 384 FSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQK----NSISWNSVIAAFARHGDGSRAL 439
+ F + LIN + L ++ +F M K N ++++++I F + +
Sbjct: 359 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGM 418
Query: 440 QFYEEMRVGGIAPTDVTFLSLLHA------CSHAGLVEKGMEFLVSMTRDHRLSPRSEHY 493
+ + EM G+ VT+ +L+H C +A +V K M VS+ + P Y
Sbjct: 419 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM---VSVG----VHPNILTY 471
Query: 494 ACVVDMLGRAGLLKEAKNFIEGLPENR---GVLVWQALLGACSIHGDSEMG--KFAADQL 548
++D L + G L +A E L + + + ++ G E G F L
Sbjct: 472 NILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSL 531
Query: 549 ILAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKG 586
+P A + +++ + +G +E +K+MKE G
Sbjct: 532 KGVSPNVIAYNTMISG-FCRKGSKEEADSLLKKMKEDG 568
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/434 (22%), Positives = 178/434 (41%), Gaps = 73/434 (16%)
Query: 82 LFVWNSLLSMYSKCGELQDAIKLFDRMPVR----DTVSWNSMISGFLRNRDFDAGFRFFK 137
L+ + L+ K G DA K+FD M R + V++ +ISG + D + F
Sbjct: 198 LYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFY 257
Query: 138 QMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFERE-ITVG----NAL 192
+M S D +L DG F + RM+ + FE++ +G ++L
Sbjct: 258 EMQTSGNYP---DSVAHNALL---DG--FCKLGRMVEAFELLRLFEKDGFVLGLRGYSSL 309
Query: 193 ITSYFKCGCFCQGRQVFDEMIERNV----VTWTAVISGLAQNELYEDGLRLFAQMRGGSV 248
I F+ + Q +++ M+++N+ + +T +I GL++ ED L+L + M +
Sbjct: 310 IDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGI 369
Query: 249 SPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQ 308
SP+T Y + + A G L EGR + +
Sbjct: 370 SPDTYCYNAVIKALCGRGLLEEGRSLQ-------------------------------LE 398
Query: 309 IFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVL-GVFGVGT 367
+ E+ D + T+++ + +NG EA +IFT I G +A++ G+ G
Sbjct: 399 MSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGE 458
Query: 368 SLPLGKQIHSLIIKK------------NFSQNPFVSNG-LINMYSKCGELHDSLQVFYEM 414
+H + + + N S + V +G ++ Y D+
Sbjct: 459 LKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADT------G 512
Query: 415 TQKNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGM 474
+ + +S+N +I F R GD AL+ +++ G++P VT+ +L++ G E+
Sbjct: 513 SSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAF 572
Query: 475 EFLVSMTRDHRLSP 488
+ + D R SP
Sbjct: 573 KLFYA-KDDFRHSP 585
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 134/324 (41%), Gaps = 46/324 (14%)
Query: 208 VFDEMIE----RNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACS 263
V++EM++ N+ T+ ++ GL + D ++F M G +SPN +TY +
Sbjct: 185 VYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLC 244
Query: 264 GVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELDGVSLTV 323
+ + RK+ + G D +AL+D + K G + A+++ E+ DG L +
Sbjct: 245 QRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEK-DGFVLGL 303
Query: 324 ILVAFAQNGFEEEAIQIF-TRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKK 382
G+ +F R T E+ ANM +KK
Sbjct: 304 -------RGYSSLIDGLFRARRYTQAFELYANM------------------------LKK 332
Query: 383 NFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQK----NSISWNSVIAAFARHG--DGS 436
N + + LI SK G++ D+L++ M K ++ +N+VI A G +
Sbjct: 333 NIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEG 392
Query: 437 RALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACV 496
R+LQ EM P T L+ + GLV + E + + SP + +
Sbjct: 393 RSLQL--EMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSG-CSPSVATFNAL 449
Query: 497 VDMLGRAGLLKEAKNFIEGLPENR 520
+D L ++G LKEA+ + + R
Sbjct: 450 IDGLCKSGELKEARLLLHKMEVGR 473
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 107/508 (21%), Positives = 200/508 (39%), Gaps = 67/508 (13%)
Query: 68 QPPFFSFDSSRRNALF-VWNSLLSMYSKCGELQDAIKLFDRMPVRDTVSWNSMISGFLRN 126
+P + S NA F + ++S+ +K ++ A++ P+ +S N + S
Sbjct: 16 KPSWMQRSYSSGNAEFNISGEVISILAKKKPIEPALE-----PLVPFLSKNIITSVIKDE 70
Query: 127 RDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREI 186
+ GFRFF S + SR + MLS +G + ++ E E+
Sbjct: 71 VNRQLGFRFFIWASRRERLRSRESFGLVIDMLSEDNGCD-----------LYWQTLE-EL 118
Query: 187 TVGNALITSYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGG 246
G + SY CFC +IS A+ + E + F +M+
Sbjct: 119 KSGGVSVDSY----CFC------------------VLISAYAKMGMAEKAVESFGRMKEF 156
Query: 247 SVSPNTLTY---LSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSL 303
P+ TY L +M LA ++ + K +L LMD K G
Sbjct: 157 DCRPDVFTYNVILRVMMREEVFFMLAFA--VYNEMLKCNCSPNLYTFGILMDGLYKKGRT 214
Query: 304 EGAWQIFESAE----ELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAV 359
A ++F+ + V+ T+++ Q G ++A ++F + T G D+ +A+
Sbjct: 215 SDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNAL 274
Query: 360 LGVFGVGTSLPLGKQIHSLIIKKNFSQNPFV-----SNGLINMYSKCGELHDSLQVFYEM 414
L F LG+ + + + + F ++ FV + LI+ + + +++ M
Sbjct: 275 LDGF-----CKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANM 329
Query: 415 TQKN----SISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLV 470
+KN I + +I ++ G AL+ M GI+P + +++ A GL+
Sbjct: 330 LKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLL 389
Query: 471 EKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNF---IEGLPENRGVLVWQA 527
E+G + M+ H + M R GL++EA+ IE + V + A
Sbjct: 390 EEGRSLQLEMSETESFPDACTHTILICSMC-RNGLVREAEEIFTEIEKSGCSPSVATFNA 448
Query: 528 LLGACSIHGDSEMGKFAADQLILAAPAS 555
L+ G+ + + ++ + PAS
Sbjct: 449 LIDGLCKSGELKEARLLLHKMEVGRPAS 476
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 172/433 (39%), Gaps = 62/433 (14%)
Query: 99 QDAIKLFDRM----PVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATL 154
DA+ LF M P + ++ + S R + +D KQM ++ + TL
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLY---TL 110
Query: 155 TTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMIE 214
+ M++ C S++ G + G+E + + LI G + ++ D M+E
Sbjct: 111 SIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVE 170
Query: 215 R----NVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTY--LSSLMACSGVQAL 268
++T A+++GL N D + L +M PN +TY + +M SG AL
Sbjct: 171 MGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTAL 230
Query: 269 AEG--RKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAE------------ 314
A RK+ KL D S ++D K GSL+ A+ +F E
Sbjct: 231 AMELLRKMEERKIKL----DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYT 286
Query: 315 ---------------------------ELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTL 347
D V+ + ++ F + G EA ++ ++
Sbjct: 287 TLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQR 346
Query: 348 GIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDS 407
GI D ++++ F L + L++ K N N LIN Y K + D
Sbjct: 347 GISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDG 406
Query: 408 LQVFYEMTQK----NSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHA 463
L++F +M+ + +++++N++I F G A + ++EM + P V++ LL
Sbjct: 407 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDG 466
Query: 464 CSHAGLVEKGMEF 476
G EK +E
Sbjct: 467 LCDNGEPEKALEI 479
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/388 (20%), Positives = 166/388 (42%), Gaps = 29/388 (7%)
Query: 85 WNSLLSMYSKCGELQDAIKLFDRMPVR----DTVSWNSMISGFLRNRDFDAGFRFFKQMS 140
+ +L + K G+ A++L +M R D V ++ +I G ++ D F F +M
Sbjct: 215 YGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 274
Query: 141 ESRTVYSRFDKATLTTMLSA-CDGPEFSSVSRMIHGLVFVGGFEREITVG----NALITS 195
+ D TT++ C + ++++ ++ +R+IT +ALI
Sbjct: 275 ---IKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI-----KRKITPDVVAFSALIDC 326
Query: 196 YFKCGCFCQGRQVFDEMIERNV----VTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPN 251
+ K G + ++ EMI+R + VT+T++I G + + + M PN
Sbjct: 327 FVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPN 386
Query: 252 TLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFE 311
T+ + + +G ++ + G+ +D + L+ + + G LE A ++F+
Sbjct: 387 IRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQ 446
Query: 312 SAEEL----DGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGT 367
D VS ++L NG E+A++IF +I +E+D + + ++ +
Sbjct: 447 EMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 506
Query: 368 SLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQK----NSISWN 423
+ + + K + N +I K G L ++ +F +M + N ++N
Sbjct: 507 KVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYN 566
Query: 424 SVIAAFARHGDGSRALQFYEEMRVGGIA 451
+I A GD +++ + EE++ G +
Sbjct: 567 ILIRAHLGEGDATKSAKLIEEIKRCGFS 594
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/488 (19%), Positives = 211/488 (43%), Gaps = 33/488 (6%)
Query: 65 IIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMPV----RDTVSWNSMI 120
++K PF S + +N LLS +K + + I L ++M D +++ I
Sbjct: 74 MVKSRPFPS--------IVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 121 SGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSA-CDGPEFSSVSRMIHGLVFV 179
+ F R +M + + D TL+++L+ C S ++ +V +
Sbjct: 126 NCFCRRSQLSLALAVLAKMMK---LGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 180 GGFEREITVGNALITSYFKCGCFCQGRQVFDEMIER----NVVTWTAVISGLAQNELYED 235
G ++ + LI F + + D+M++R ++VT+ V++GL + +
Sbjct: 183 G-YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 236 GLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMD 295
L L +M + N + + + + + + + + + G++ ++ ++L++
Sbjct: 242 ALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 301
Query: 296 LYSKCGSLEGAWQIFESAEEL----DGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEV 351
G A ++ + E + V+ ++ AF + G EA ++ ++ I+
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP 361
Query: 352 DANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVF 411
D + ++ F + L KQ+ ++ K+ N N LIN + KC + D +++F
Sbjct: 362 DTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELF 421
Query: 412 YEMTQK----NSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDV-TFLSLLHACSH 466
EM+Q+ N++++ ++I F + GD A +++M V PTD+ T+ LLH
Sbjct: 422 REMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQM-VSNRVPTDIMTYSILLHGLCS 480
Query: 467 AGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFIEGLPENRGVLVWQ 526
G ++ + + + + Y +++ + +AG + EA + L V+ +
Sbjct: 481 YGKLDTALVIFKYLQKSE-MELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYN 539
Query: 527 ALL-GACS 533
++ G CS
Sbjct: 540 TMISGLCS 547
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 10/205 (4%)
Query: 58 GSSIHARIIKQPPFFSFDSSRR--NALFVWNSLLSMYSKCGELQDAIKLFDRMPVR---- 111
G +H R+ + F F S+ + +N+L++ + KC ++D ++LF M R
Sbjct: 372 GFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVG 431
Query: 112 DTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSR 171
+TV++ ++I GF + D D+ FKQM +R D T + +L +
Sbjct: 432 NTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPT---DIMTYSILLHGLCSYGKLDTAL 488
Query: 172 MIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEM-IERNVVTWTAVISGLAQN 230
+I + E I + N +I K G + +F + I+ +VVT+ +ISGL
Sbjct: 489 VIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSK 548
Query: 231 ELYEDGLRLFAQMRGGSVSPNTLTY 255
L ++ LF +M+ PN+ TY
Sbjct: 549 RLLQEADDLFRKMKEDGTLPNSGTY 573
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 181/409 (44%), Gaps = 58/409 (14%)
Query: 82 LFVWNSLLSMYSKCGELQDAIKLFDRMPV----RDTVSWNSMISGFLRNRDFDAGFRFFK 137
L + ++++ K GE A+ L ++M D V +N++I G + + D F F
Sbjct: 215 LVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFN 274
Query: 138 QMSESRTVYSRFDKATLTTMLSA-CDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSY 196
+M E++ + + D T ++S C+ +S SR++ ++ ++ NALI ++
Sbjct: 275 KM-ETKGI--KPDVFTYNPLISCLCNYGRWSDASRLLSDML-EKNINPDLVFFNALIDAF 330
Query: 197 FKCGCFCQGRQVFDEMIER-----NVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPN 251
K G + +++DEM++ +VV + +I G + + E+G+ +F +M + N
Sbjct: 331 VKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 390
Query: 252 TLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFE 311
T+TY + + + + + + G+ D+ + L+D G++E A +FE
Sbjct: 391 TVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFE 450
Query: 312 SAEE----LDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGT 367
++ LD V+ T ++ A + G E+ +F + G++ N+V+ + G
Sbjct: 451 YMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVK--PNVVTYTTMMSG--- 505
Query: 368 SLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQK----NSISWN 423
F GL E D+L F EM + NS ++N
Sbjct: 506 ---------------------FCRKGL-------KEEADAL--FVEMKEDGPLPNSGTYN 535
Query: 424 SVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEK 472
++I A R GD + + + +EMR G A TF L+ H G ++K
Sbjct: 536 TLIRARLRDGDEAASAELIKEMRSCGFAGDASTF-GLVTNMLHDGRLDK 583
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/440 (20%), Positives = 192/440 (43%), Gaps = 41/440 (9%)
Query: 97 ELQDAIKLFDRM----PVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKA 152
+L DAI LF M P V ++ ++S + FD +QM ++ + +
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 153 TLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQV---- 208
C + S ++ I G + G+ I N+L+ FC G ++
Sbjct: 115 IFINYF--CRRSQLS-LALAILGKMMKLGYGPSIVTLNSLLNG------FCHGNRISEAV 165
Query: 209 --FDEMIER----NVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMAC 262
D+M+E + VT+T ++ GL Q+ + + L +M P+ +TY + +
Sbjct: 166 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI--- 222
Query: 263 SGVQALAEGRKIHGLLWKL---GMQSDLCIESALMDLYSKCGSLEGAWQIFESAE----E 315
+G+ E LL K+ +++D+ I + ++D K ++ A+ +F E +
Sbjct: 223 NGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIK 282
Query: 316 LDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQI 375
D + ++ G +A ++ + ++ I D +A++ F L +++
Sbjct: 283 PDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKL 342
Query: 376 HSLIIK-KNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQK----NSISWNSVIAAFA 430
+ ++K K+ + N LI + K + + ++VF EM+Q+ N++++ ++I F
Sbjct: 343 YDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFF 402
Query: 431 RHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSM-TRDHRLSPR 489
+ D A +++M G+ P +T+ LL + G VE + M RD +L
Sbjct: 403 QARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIV 462
Query: 490 SEHYACVVDMLGRAGLLKEA 509
+ Y +++ L +AG +++
Sbjct: 463 T--YTTMIEALCKAGKVEDG 480
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/414 (21%), Positives = 185/414 (44%), Gaps = 32/414 (7%)
Query: 82 LFVWNSLLSMYSKCGELQDAIKLFDRMPV----RDTVSWNSMISGFLRNRDFDAGFRFFK 137
L + ++++ K GE A+ L ++M D V ++++I + R D F
Sbjct: 205 LVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFT 264
Query: 138 QMSESRTVYSRFDKATLTTMLSA-CDGPEFSSVSRMIHGLVFVGGFEREITVG----NAL 192
+M R D T ++++S C+ +S SR++ ++ ER+I N+L
Sbjct: 265 EMDNKGI---RPDVFTYSSLISCLCNYGRWSDASRLLSDML-----ERKINPNVVTFNSL 316
Query: 193 ITSYFKCGCFCQGRQVFDEMIER----NVVTWTAVISGLAQNELYEDGLRLFAQMRGGSV 248
I ++ K G + ++FDEMI+R N+VT+ ++I+G ++ ++ ++F M
Sbjct: 317 IDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDC 376
Query: 249 SPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQ 308
P+ +TY + + + + +G ++ + + G+ + + L+ + + + A
Sbjct: 377 LPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQM 436
Query: 309 IFESAEELDGV-----SLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVF 363
+F+ DGV + +L +NG E+A+ +F + +E D + +
Sbjct: 437 VFKQMVS-DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGM 495
Query: 364 GVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQK----NS 419
+ G + + K + N +I+ + K G ++ +F +M + +S
Sbjct: 496 CKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDS 555
Query: 420 ISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKG 473
++N++I A R GD + + + +EMR A D + L+ H G ++KG
Sbjct: 556 GTYNTLIRAHLRDGDKAASAELIKEMRSCRFA-GDASTYGLVTDMLHDGRLDKG 608
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 99/498 (19%), Positives = 209/498 (41%), Gaps = 80/498 (16%)
Query: 72 FSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRM----PVRDTVSWNSMISGFLRNR 127
S+D R N+LL + +L +A+ LF M P V ++ ++S + +
Sbjct: 27 LSYDGYREK--LSRNALLHL-----KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMK 79
Query: 128 DFDAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREIT 187
FD F ++M ++ + T M++ S + I G + G+ I
Sbjct: 80 KFDLVISFGEKMEILGVSHNLY---TYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIV 136
Query: 188 VGNALITSYFKCGCFCQGRQV------FDEMIER----NVVTWTAVISGLAQNELYEDGL 237
N+L+ FC G ++ D+M+E + VT+T ++ GL Q+ + +
Sbjct: 137 TLNSLLNG------FCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV 190
Query: 238 RLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKL---GMQSDLCIESALM 294
L +M P+ +TY + + +G+ E LL K+ +++D+ I S ++
Sbjct: 191 ALVERMVVKGCQPDLVTYGAVI---NGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVI 247
Query: 295 DLYSKCGSLEGAWQIF---------------------------------------ESAEE 315
D K ++ A +F E
Sbjct: 248 DSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKIN 307
Query: 316 LDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQI 375
+ V+ ++ AFA+ G EA ++F ++ I+ + ++++ F + L +QI
Sbjct: 308 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 367
Query: 376 HSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQK----NSISWNSVIAAFAR 431
+L++ K+ + N LIN + K ++ D +++F +M+++ N++++ ++I F +
Sbjct: 368 FTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQ 427
Query: 432 HGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSE 491
D A +++M G+ P +T+ +LL G +EK M + + ++ P
Sbjct: 428 ASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM-VVFEYLQKSKMEPDIY 486
Query: 492 HYACVVDMLGRAGLLKEA 509
Y + + + +AG +++
Sbjct: 487 TYNIMSEGMCKAGKVEDG 504
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 94/450 (20%), Positives = 172/450 (38%), Gaps = 82/450 (18%)
Query: 82 LFVWNSLLSMYSKCGELQDAIKLFDRMPVR----DTVSWNSMISGFLRNRDFDAGFRFFK 137
+F +N+L++ + K + DA ++ DRM + DTV++N MI D +
Sbjct: 158 VFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLN 217
Query: 138 QMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYF 197
Q +LS P + + +I + GG + +
Sbjct: 218 Q------------------LLSDNCQPTVITYTILIEATMLEGGVDEAL----------- 248
Query: 198 KCGCFCQGRQVFDEMIER----NVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTL 253
++ DEM+ R ++ T+ +I G+ + + + + + P+ +
Sbjct: 249 ---------KLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVI 299
Query: 254 TYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESA 313
+Y L A EG K+ ++ ++ S L+ + G +E A + +
Sbjct: 300 SYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLM 359
Query: 314 EEL----DGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSL 369
+E D S ++ AF + G + AI+ +++ G D + VL
Sbjct: 360 KEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKN--- 416
Query: 370 PLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVIAAF 429
GK +L I + K GE+ S NS S+N++ +A
Sbjct: 417 --GKADQALEI-----------------FGKLGEVGCS---------PNSSSYNTMFSAL 448
Query: 430 ARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPR 489
GD RAL EM GI P ++T+ S++ G+V++ E LV M R P
Sbjct: 449 WSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDM-RSCEFHPS 507
Query: 490 SEHYACVVDMLGRAGLLKEAKNFIEGLPEN 519
Y V+ +A +++A N +E + N
Sbjct: 508 VVTYNIVLLGFCKAHRIEDAINVLESMVGN 537
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 113/265 (42%), Gaps = 14/265 (5%)
Query: 336 EAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQ-NPFVSNGL 394
E++ + +V G D + + ++ F ++P K + + I + F Q + F N L
Sbjct: 107 ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIP--KAVRVMEILEKFGQPDVFAYNAL 164
Query: 395 INMYSKCGELHDSLQVFYEMTQKN----SISWNSVIAAFARHGDGSRALQFYEEMRVGGI 450
IN + K + D+ +V M K+ ++++N +I + G AL+ ++
Sbjct: 165 INGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNC 224
Query: 451 APTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAK 510
PT +T+ L+ A G V++ ++ + M L P Y ++ + + G++ A
Sbjct: 225 QPTVITYTILIEATMLEGGVDEALKLMDEML-SRGLKPDMFTYNTIIRGMCKEGMVDRAF 283
Query: 511 NFIEGLPENRG----VLVWQALLGACSIHGDSEMG-KFAADQLILAAPASSAPHVLMANI 565
+ L E +G V+ + LL A G E G K + + ++
Sbjct: 284 EMVRNL-ELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITT 342
Query: 566 YSAEGKWKERAGAIKRMKEKGVAKE 590
+GK +E +K MKEKG+ +
Sbjct: 343 LCRDGKIEEAMNLLKLMKEKGLTPD 367
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 137/297 (46%), Gaps = 13/297 (4%)
Query: 195 SYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLT 254
SY +C+ R + N+ T+TA+++ A+ L E +F Q++ + P+
Sbjct: 280 SYMSWKLYCEMR---SHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYV 336
Query: 255 YLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAE 314
Y + + + S +I L+ +G + D + ++D Y + G A +FE +
Sbjct: 337 YNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMK 396
Query: 315 ELDGVSLT-----VILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSL 369
L G++ T ++L A+++ + I + G+E D +++++L ++G
Sbjct: 397 RL-GIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQF 455
Query: 370 PLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKN----SISWNSV 425
++I + + + + N LIN+Y K G L ++F E+ +KN ++W S
Sbjct: 456 TKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSR 515
Query: 426 IAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTR 482
I A++R + L+ +EEM G AP T LL ACS VE+ L +M +
Sbjct: 516 IGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHK 572
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 66/129 (51%), Gaps = 5/129 (3%)
Query: 392 NGLINMYSKCGELHDSLQVFYEM----TQKNSISWNSVIAAFARHGDGSRALQFYEEMRV 447
N +IN+Y K + + S +++ EM + N ++ +++ AFAR G +A + +E+++
Sbjct: 268 NLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQE 327
Query: 448 GGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLK 507
G+ P + +L+ + S AG E + S+ + P Y +VD GRAGL
Sbjct: 328 DGLEPDVYVYNALMESYSRAGYPYGAAE-IFSLMQHMGCEPDRASYNIMVDAYGRAGLHS 386
Query: 508 EAKNFIEGL 516
+A+ E +
Sbjct: 387 DAEAVFEEM 395
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/302 (18%), Positives = 132/302 (43%), Gaps = 18/302 (5%)
Query: 76 SSRRNALFVWNSLLS-MYSKCGELQDAIKLFDRMPVRD-----TVSWNSMISGFLRNRDF 129
S + + V+N+ + + + G ++AI +F RM RD T ++N MI+ + +
Sbjct: 222 SPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMK-RDRCKPTTETYNLMINLYGKASKS 280
Query: 130 DAGFRFFKQMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVG 189
++ + +M R+ + + T T +++A + I + G E ++ V
Sbjct: 281 YMSWKLYCEM---RSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVY 337
Query: 190 NALITSYFKCGCFCQGRQVFDEM----IERNVVTWTAVISGLAQNELYEDGLRLFAQMRG 245
NAL+ SY + G ++F M E + ++ ++ + L+ D +F +M+
Sbjct: 338 NALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKR 397
Query: 246 GSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEG 305
++P +++ L A S + + + I + + G++ D + +++++LY + G
Sbjct: 398 LGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTK 457
Query: 306 AWQIFESAEE----LDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLG 361
+I E D + +++ + + GF E ++F + D ++ +G
Sbjct: 458 MEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIG 517
Query: 362 VF 363
+
Sbjct: 518 AY 519
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 137/297 (46%), Gaps = 13/297 (4%)
Query: 195 SYFKCGCFCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLT 254
SY +C+ R + N+ T+TA+++ A+ L E +F Q++ + P+
Sbjct: 302 SYMSWKLYCEMR---SHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYV 358
Query: 255 YLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAE 314
Y + + + S +I L+ +G + D + ++D Y + G A +FE +
Sbjct: 359 YNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMK 418
Query: 315 ELDGVSLT-----VILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSL 369
L G++ T ++L A+++ + I + G+E D +++++L ++G
Sbjct: 419 RL-GIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQF 477
Query: 370 PLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKN----SISWNSV 425
++I + + + + N LIN+Y K G L ++F E+ +KN ++W S
Sbjct: 478 TKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSR 537
Query: 426 IAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTR 482
I A++R + L+ +EEM G AP T LL ACS VE+ L +M +
Sbjct: 538 IGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHK 594
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 66/129 (51%), Gaps = 5/129 (3%)
Query: 392 NGLINMYSKCGELHDSLQVFYEM----TQKNSISWNSVIAAFARHGDGSRALQFYEEMRV 447
N +IN+Y K + + S +++ EM + N ++ +++ AFAR G +A + +E+++
Sbjct: 290 NLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQE 349
Query: 448 GGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLK 507
G+ P + +L+ + S AG E + S+ + P Y +VD GRAGL
Sbjct: 350 DGLEPDVYVYNALMESYSRAGYPYGAAE-IFSLMQHMGCEPDRASYNIMVDAYGRAGLHS 408
Query: 508 EAKNFIEGL 516
+A+ E +
Sbjct: 409 DAEAVFEEM 417
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/294 (18%), Positives = 129/294 (43%), Gaps = 18/294 (6%)
Query: 84 VWNSLLS-MYSKCGELQDAIKLFDRMPVRD-----TVSWNSMISGFLRNRDFDAGFRFFK 137
V+N+ + + + G ++AI +F RM RD T ++N MI+ + + ++ +
Sbjct: 252 VYNAYIEGLMKRKGNTEEAIDVFQRMK-RDRCKPTTETYNLMINLYGKASKSYMSWKLYC 310
Query: 138 QMSESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYF 197
+M R+ + + T T +++A + I + G E ++ V NAL+ SY
Sbjct: 311 EM---RSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYS 367
Query: 198 KCGCFCQGRQVFDEM----IERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTL 253
+ G ++F M E + ++ ++ + L+ D +F +M+ ++P
Sbjct: 368 RAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMK 427
Query: 254 TYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESA 313
+++ L A S + + + I + + G++ D + +++++LY + G +I
Sbjct: 428 SHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEM 487
Query: 314 EE----LDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVF 363
E D + +++ + + GF E ++F + D ++ +G +
Sbjct: 488 ENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAY 541
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 92/479 (19%), Positives = 207/479 (43%), Gaps = 38/479 (7%)
Query: 52 DGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGELQDAIKLFDRMP-- 109
D L ++ ++K PF S + ++ LLS +K + I L ++M
Sbjct: 59 DLKLDDAVNLFGDMVKSRPFPS--------IVEFSKLLSAIAKMNKFDLVISLGEQMQNL 110
Query: 110 --VRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSA-CDGPEF 166
+ +++ +I+ F R +M + + D TL ++L+ C G
Sbjct: 111 GISHNLYTYSILINCFCRRSQLSLALAVLAKMMK---LGYEPDIVTLNSLLNGFCHGNRI 167
Query: 167 SSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEMI----ERNVVTWTA 222
S ++ +V +G ++ + N LI F+ + + D M+ + ++VT+
Sbjct: 168 SDAVSLVGQMVEMG-YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGI 226
Query: 223 VISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLG 282
V++GL + + L L +M G + P + Y + + A + + + + + G
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG 286
Query: 283 MQSDLCIESALMDLYSKCGSLEGAW--------QIFESAEELDGVSLTVILVAFAQNGFE 334
++ ++ ++L+ +C G W + E + V+ + ++ AF + G
Sbjct: 287 IRPNVVTYNSLI----RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 342
Query: 335 EEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGL 394
EA +++ ++ I+ D S+++ F + L K + L+I K+ N N L
Sbjct: 343 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 402
Query: 395 INMYSKCGELHDSLQVFYEMTQK----NSISWNSVIAAFARHGDGSRALQFYEEMRVGGI 450
I + K + + +++F EM+Q+ N++++ ++I F + + A +++M G+
Sbjct: 403 IKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGV 462
Query: 451 APTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEA 509
P +T+ LL + G VE + + R ++ P Y +++ + +AG +++
Sbjct: 463 LPDIMTYSILLDGLCNNGKVETALVVFEYLQR-SKMEPDIYTYNIMIEGMCKAGKVEDG 520
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/441 (19%), Positives = 181/441 (41%), Gaps = 34/441 (7%)
Query: 83 FVWNSLLSMYSKCGELQDAIKLFDRMPVR----DTVSWNSMISGFLRNRDFDAGFRFFKQ 138
F +N+L+ + +A+ L DRM V+ D V++ +++G + D D K+
Sbjct: 187 FTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKK 246
Query: 139 MSESR-----TVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVG--GFEREITVGNA 191
M + + +Y+ T + + C+ + +V+ ++ + G + N+
Sbjct: 247 MEQGKIEPGVVIYN-------TIIDALCN---YKNVNDALNLFTEMDNKGIRPNVVTYNS 296
Query: 192 LITSYFKCGCFCQGRQVFDEMIER----NVVTWTAVISGLAQNELYEDGLRLFAQMRGGS 247
LI G + ++ +MIER NVVT++A+I + + +L+ +M S
Sbjct: 297 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 356
Query: 248 VSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAW 307
+ P+ TY S + L E + + L+ ++ + L+ + K ++
Sbjct: 357 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGM 416
Query: 308 QIFESAEEL----DGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVF 363
++F + + V+ T ++ F Q + A +F ++V+ G+ D S +L
Sbjct: 417 ELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGL 476
Query: 364 GVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQK----NS 419
+ + + + + + N +I K G++ D +F ++ K N
Sbjct: 477 CNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 536
Query: 420 ISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVS 479
+++ ++++ F R G A + EM+ G P T+ +L+ A G E +
Sbjct: 537 VTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIRE 596
Query: 480 MTRDHRLSPRSEHYACVVDML 500
M R R + V +ML
Sbjct: 597 M-RSCRFVGDASTIGLVTNML 616
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/321 (20%), Positives = 138/321 (42%), Gaps = 15/321 (4%)
Query: 207 QVFDEMIER----NVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMAC 262
+F +M++ ++V ++ ++S +A+ ++ + L QM+ +S N TY S L+ C
Sbjct: 67 NLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTY-SILINC 125
Query: 263 SGVQA-LAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAW----QIFESAEELD 317
++ L+ + + KLG + D+ ++L++ + + A Q+ E + D
Sbjct: 126 FCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPD 185
Query: 318 GVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHS 377
+ ++ ++ EA+ + R+V G + D V+ + L +
Sbjct: 186 SFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLK 245
Query: 378 LIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQK----NSISWNSVIAAFARHG 433
+ + + N +I+ ++D+L +F EM K N +++NS+I +G
Sbjct: 246 KMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYG 305
Query: 434 DGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHY 493
S A + +M I P VTF +L+ A G + + + M + + P Y
Sbjct: 306 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK-RSIDPDIFTY 364
Query: 494 ACVVDMLGRAGLLKEAKNFIE 514
+ +++ L EAK+ E
Sbjct: 365 SSLINGFCMHDRLDEAKHMFE 385
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 110/261 (42%), Gaps = 54/261 (20%)
Query: 38 NHAHLSSLLSVCGRDGNLHLGSSIHARIIKQPPFFSFDSSRRNALFVWNSLLSMYSKCGE 97
N S+L+ ++G L ++ +IK+ S D +F ++SL++ +
Sbjct: 325 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKR----SIDPD----IFTYSSLINGFCMHDR 376
Query: 98 LQDAIKLFDRMPVRD----TVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKAT 153
L +A +F+ M +D V++N++I GF + + D G F++MS+ V + T
Sbjct: 377 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVG---NTVT 433
Query: 154 LTTMLSA------CDG--------------PEFSSVSRMIHGLVFVGGFER--------- 184
TT++ CD P+ + S ++ GL G E
Sbjct: 434 YTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQ 493
Query: 185 ------EITVGNALITSYFKCGCFCQGRQVFDEM----IERNVVTWTAVISGLAQNELYE 234
+I N +I K G G +F + ++ NVVT+T ++SG + L E
Sbjct: 494 RSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKE 553
Query: 235 DGLRLFAQMRGGSVSPNTLTY 255
+ LF +M+ P++ TY
Sbjct: 554 EADALFREMKEEGPLPDSGTY 574
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/315 (18%), Positives = 133/315 (42%), Gaps = 15/315 (4%)
Query: 319 VSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSL 378
V + +L A A+ + I + ++ LGI + S ++ F + L L + +
Sbjct: 82 VEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAK 141
Query: 379 IIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMT----QKNSISWNSVIAAFARHGD 434
++K + + N L+N + + D++ + +M Q +S ++N++I RH
Sbjct: 142 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNR 201
Query: 435 GSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEHYA 494
S A+ + M V G P VT+ +++ G ++ + L M + ++ P Y
Sbjct: 202 ASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQG-KIEPGVVIYN 260
Query: 495 CVVDMLGRAGLLKEAKNFIEGLPENRG----VLVWQALLGACSIHGD-SEMGKFAADQLI 549
++D L + +A N + +N+G V+ + +L+ +G S+ + +D +
Sbjct: 261 TIIDALCNYKNVNDALNLFTEM-DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 319
Query: 550 LAAPASSAPHVLMANIYSAEGKWKERAGAIKRMKEKGVAKEVGVSWIEIDKQVSSFVVGD 609
+ + + + EGK E +++ ++ + + + ++ F + D
Sbjct: 320 RKINPNVVTFSALIDAFVKEGKLVE----AEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 375
Query: 610 KLHPQADIIFLELSR 624
+L + L +S+
Sbjct: 376 RLDEAKHMFELMISK 390
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/430 (20%), Positives = 175/430 (40%), Gaps = 57/430 (13%)
Query: 86 NSLLSMYSKCGELQDAIKLFDRMPVR----DTVSWNSMISGFLRNRDFDAGFRFFKQMSE 141
N +L + + G ++ A +FD M VR D+ S+ M+ G R+ R+ M +
Sbjct: 186 NCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQ 245
Query: 142 SRTVYSRFDKATLTTMLSA-CDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCG 200
+ D AT T +L+A C+ + ++ +G F+ + +LI K G
Sbjct: 246 RGFIP---DNATCTLILTALCENGLVNRAIWYFRKMIDLG-FKPNLINFTSLIDGLCKKG 301
Query: 201 CFCQGRQVFDEMIER----NVVTWTAVISGLAQNELYEDGLRLFAQM-RGGSVSPNTLTY 255
Q ++ +EM+ NV T TA+I GL + E RLF ++ R + PN TY
Sbjct: 302 SIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTY 361
Query: 256 LSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQI------ 309
S + L + + + G+ ++ + L++ + K GS A+++
Sbjct: 362 TSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGD 421
Query: 310 ---------------------------------FESAEELDGVSLTVILVAFAQNGFEEE 336
F E DGV+ T+++ + +
Sbjct: 422 EGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQ 481
Query: 337 AIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLIN 396
A+ F R+ G E D + + ++ F + +++ L++ +I+
Sbjct: 482 ALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMIS 541
Query: 397 MYSKCGELHDSLQVFYEMTQ----KNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAP 452
Y K G++ +L+ F+ M + +S ++ S+I+ + A + YE M G++P
Sbjct: 542 CYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSP 601
Query: 453 TDVTFLSLLH 462
+VT ++L +
Sbjct: 602 PEVTRVTLAY 611
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 88/460 (19%), Positives = 190/460 (41%), Gaps = 55/460 (11%)
Query: 85 WNSLLSMYSKCGELQDAIKLFDRMP----VRDTVSWNSMISGFLRNRDFDAGFRFFKQMS 140
+NS++ + K G L D + F+ M D +++N++I+ F + G F+++M
Sbjct: 300 YNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMK 359
Query: 141 ESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCG 200
+ + +TL + C + + VG E T +LI + K G
Sbjct: 360 GNGLKPNVVSYSTLVD--AFCKEGMMQQAIKFYVDMRRVGLVPNEYTY-TSLIDANCKIG 416
Query: 201 CFCQGRQVFDEM----IERNVVTWTAVISGLAQNELYEDGLRLFAQM------------- 243
++ +EM +E NVVT+TA+I GL E ++ LF +M
Sbjct: 417 NLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYN 476
Query: 244 ----------------------RGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKL 281
+G + P+ L Y + + ++ + + + + +
Sbjct: 477 ALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKEC 536
Query: 282 GMQSDLCIESALMDLYSKCGSLEGAWQIFESAEELD----GVSLTVILVAFAQNGFEEEA 337
G++++ I + LMD Y K G+ + + +ELD V+ V++ +N +A
Sbjct: 537 GIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKA 596
Query: 338 IQIFTRIVT-LGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLIN 396
+ F RI G++ +A + +A++ + + +++K + L++
Sbjct: 597 VDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMD 656
Query: 397 MYSKCGELHDSLQVFYEMTQ----KNSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAP 452
K G + ++L + +M + + +++ S++ + +A F EEM GI P
Sbjct: 657 GNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHP 716
Query: 453 TDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSPRSEH 492
+V +S+L G +++ +E + + L+ +++
Sbjct: 717 DEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLTSDNDN 756
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 90/450 (20%), Positives = 195/450 (43%), Gaps = 21/450 (4%)
Query: 84 VWNSLLSMYSKCGELQDAIKLFDRMP----VRDTVSWNSMISGFLRNRDFDAGFRFFKQM 139
V+++L S+ G L++AI+ F +M T S N ++ F + D RFFK M
Sbjct: 194 VFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDM 253
Query: 140 SESRTVYSRFDKATLTTMLSA-CDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFK 198
+ + F T M+ C + + + + F G +T N++I + K
Sbjct: 254 IGAGARPTVF---TYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTY-NSMIDGFGK 309
Query: 199 CGCFCQGRQVFDEM----IERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLT 254
G F+EM E +V+T+ A+I+ + GL + +M+G + PN ++
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 255 YLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAW----QIF 310
Y + + A + + K + + ++G+ + ++L+D K G+L A+ ++
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429
Query: 311 ESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLP 370
+ E + V+ T ++ +EA ++F ++ T G+ + +A++ F ++
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489
Query: 371 LGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQ----KNSISWNSVI 426
++ + + + + + I ++ + V EM + NS+ + +++
Sbjct: 490 RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLM 549
Query: 427 AAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRL 486
A+ + G+ + L +EM+ I T VTF L+ LV K +++ ++ D L
Sbjct: 550 DAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGL 609
Query: 487 SPRSEHYACVVDMLGRAGLLKEAKNFIEGL 516
+ + ++D L + ++ A E +
Sbjct: 610 QANAAIFTAMIDGLCKDNQVEAATTLFEQM 639
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 99/473 (20%), Positives = 197/473 (41%), Gaps = 95/473 (20%)
Query: 84 VWNSLLSMYSKCGELQDAIKLFDRM----PVRDTVSWNSMISGFLRNRDFDAGFRFFKQM 139
++ +L+ SKC + +A++L + M V D ++N +I G + F ++
Sbjct: 254 IYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK----------FDRI 303
Query: 140 SESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFER-----------EITV 188
+E+ + +R ML P+ + +++GL +G + EI +
Sbjct: 304 NEAAKMVNR--------MLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVI 355
Query: 189 GNALITSYFKCGCFCQGRQVFDEMIER-----NVVTWTAVISGLAQNELYEDGLRLFAQM 243
N LI + G + V +M+ +V T+ ++I G + L L + M
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415
Query: 244 RGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSL 303
R PN +Y + L+D + K G +
Sbjct: 416 RNKGCKPNVYSY-----------------------------------TILVDGFCKLGKI 440
Query: 304 EGAWQIFE--SAEEL--DGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDA----NM 355
+ A+ + SA+ L + V ++ AF + EA++IF + G + D ++
Sbjct: 441 DEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSL 500
Query: 356 VSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMT 415
+S + V + +L L + + I + N N LIN + + GE+ ++ ++ EM
Sbjct: 501 ISGLCEVDEIKHALWLLRDM----ISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 556
Query: 416 QKNS----ISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVE 471
+ S I++NS+I R G+ +A +E+M G AP++++ L++ +G+VE
Sbjct: 557 FQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVE 616
Query: 472 KGMEFLVSMTRDHRLSPRSEHYACVVDMLGRAGLLKEAKNFI-----EGLPEN 519
+ +EF M +P + +++ L RAG +++ EG+P +
Sbjct: 617 EAVEFQKEMVLRGS-TPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPD 668
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 95/194 (48%), Gaps = 16/194 (8%)
Query: 82 LFVWNSLLSMYSKCGELQDAIKLFDRM----PVRDTVSWNSMISGFLRNRDFDAGFRFFK 137
++ +NSL+S + E++ A+ L M V +TV++N++I+ FLR + +
Sbjct: 494 VYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVN 553
Query: 138 QMSESRTVYSRFDKATLTTMLSA-CDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSY 196
+M S D+ T +++ C E + ++ G I+ N LI
Sbjct: 554 EMVFQG---SPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISC-NILINGL 609
Query: 197 FKCGCFCQGRQVFDEMIER----NVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNT 252
+ G + + EM+ R ++VT+ ++I+GL + EDGL +F +++ + P+T
Sbjct: 610 CRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDT 669
Query: 253 LTYLSSLMA--CSG 264
+T+ ++LM+ C G
Sbjct: 670 VTF-NTLMSWLCKG 682
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 101/469 (21%), Positives = 185/469 (39%), Gaps = 97/469 (20%)
Query: 84 VWNSLLSMYSKCGELQDAIKLFDRMP----VRDTVSWNSMISGFLRNRDFDAGFRFFKQM 139
+N++L SK G L D +L M V + V++N+++ G+ + F+ + M
Sbjct: 242 TYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELM 301
Query: 140 SESRTVYSRFDKATLTTMLSACDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKC 199
++ + P+ + + +I+GL G
Sbjct: 302 KQTNVL------------------PDLCTYNILINGLCNAGSMR---------------- 327
Query: 200 GCFCQGRQVFDEM----IERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTY 255
+G ++ D M ++ +VVT+ +I G + L + +L QM V N +T+
Sbjct: 328 ----EGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTH 383
Query: 256 LSSLM-ACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIF---- 310
SL C + A RK+ L+ G D+ L+ Y K G L GA ++
Sbjct: 384 NISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMG 443
Query: 311 ESAEELDGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVD-ANMVSAVLGVF---GVG 366
+ +++ ++L IL A + +EA + G VD + ++G F V
Sbjct: 444 QKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVE 503
Query: 367 TSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQKNSISWNSVI 426
+L + ++ + I P VS ++NS+I
Sbjct: 504 KALEMWDEMKKVKI------TPTVS-----------------------------TFNSLI 528
Query: 427 AAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRL 486
HG A++ ++E+ G+ P D TF S++ G VEK EF + H
Sbjct: 529 GGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIK-HSF 587
Query: 487 SPRSEHYAC--VVDMLGRAGLLKEAKNFIEGLPENRGV--LVWQALLGA 531
P ++Y C +++ L + G+ ++A NF L E R V + + ++ A
Sbjct: 588 KP--DNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISA 634
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 107/249 (42%), Gaps = 12/249 (4%)
Query: 112 DTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATLTTMLSA-CDGPEFSSVS 170
D V+++++I +L+ D ++M + + + TL T+L A C +
Sbjct: 415 DIVTYHTLIKAYLKVGDLSGALEMMREMGQKGI---KMNTITLNTILDALCKERKLDEAH 471
Query: 171 RMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEM----IERNVVTWTAVISG 226
+++ G E+T G LI +F+ + +++DEM I V T+ ++I G
Sbjct: 472 NLLNSAHKRGFIVDEVTYG-TLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGG 530
Query: 227 LAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMACSGVQALAEGRKIHGLLWKLGMQSD 286
L + E + F ++ + P+ T+ S ++ + + + + K + D
Sbjct: 531 LCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPD 590
Query: 287 LCIESALMDLYSKCGSLEGAWQIFES---AEELDGVSLTVILVAFAQNGFEEEAIQIFTR 343
+ L++ K G E A F + E+D V+ ++ AF ++ +EA + +
Sbjct: 591 NYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSE 650
Query: 344 IVTLGIEVD 352
+ G+E D
Sbjct: 651 MEEKGLEPD 659
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 95/436 (21%), Positives = 177/436 (40%), Gaps = 68/436 (15%)
Query: 99 QDAIKLFDRM----PVRDTVSWNSMISGFLRNRDFDAGFRFFKQMSESRTVYSRFDKATL 154
DAI LF M P+ + ++ + S + + +D KQM ++ + + +
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 155 TTMLSACDGP--EFSSVSRMIHGLVFVGGFEREITVGNALITSYFKCGCFCQGRQVFDEM 212
C FS++ ++I G+E + LI G + ++ D M
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKL-----GYEPNTITFSTLINGLCLEGRVSEALELVDRM 184
Query: 213 IER----NVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTY--LSSLMACSGVQ 266
+E +++T +++GL + + + L +M PN +TY + ++M SG
Sbjct: 185 VEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQT 244
Query: 267 ALAEGRKIHGLLWKL---GMQSDLCIESALMDLYSKCGSLEGAWQIFESAEEL------- 316
ALA LL K+ ++ D S ++D K GSL+ A+ +F E
Sbjct: 245 ALA-----MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNII 299
Query: 317 ----------------DG----------------VSLTVILVAFAQNGFEEEAIQIFTRI 344
DG V+ +V++ +F + G EA ++ +
Sbjct: 300 TYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM 359
Query: 345 VTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHSLIIKKNFSQNPFVSNGLINMYSKCGEL 404
+ GI D ++++ F L Q+ L++ K N N LIN Y K +
Sbjct: 360 IHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRI 419
Query: 405 HDSLQVFYEMTQK----NSISWNSVIAAFARHGDGSRALQFYEEMRVGGIAPTDVTFLSL 460
D L++F +M+ + +++++N++I F G + A + ++EM + P VT+ L
Sbjct: 420 DDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKIL 479
Query: 461 LHACSHAGLVEKGMEF 476
L G EK +E
Sbjct: 480 LDGLCDNGESEKALEI 495
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/384 (18%), Positives = 164/384 (42%), Gaps = 21/384 (5%)
Query: 85 WNSLLSMYSKCGELQDAIKLFDRMPVR----DTVSWNSMISGFLRNRDFDAGFRFFKQMS 140
+ +L++ K G+ A++L +M R D V ++ +I G ++ D F F +M
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM- 289
Query: 141 ESRTVYSRFDKATLTTMLSA-CDGPEFSSVSRMIHGLVFVGGFEREITVGNALITSYFKC 199
E + + + T ++ C+ + ++++ ++ + + LI S+ K
Sbjct: 290 EMKGITTNI--ITYNILIGGFCNAGRWDDGAKLLRDMI-KRKINPNVVTFSVLIDSFVKE 346
Query: 200 GCFCQGRQVFDEMIERNV----VTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTY 255
G + ++ EMI R + +T+T++I G + + ++ M PN T+
Sbjct: 347 GKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTF 406
Query: 256 LSSLMACSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAWQIFESAEE 315
+ + +G ++ + G+ +D + L+ + + G L A ++F+
Sbjct: 407 NILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVS 466
Query: 316 L----DGVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPL 371
+ V+ ++L NG E+A++IF +I +E+D + + ++ + +
Sbjct: 467 RKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDD 526
Query: 372 GKQIHSLIIKKNFSQNPFVSNGLINMYSKCGELHDSLQVFYEMTQK----NSISWNSVIA 427
+ + K N +I K G L ++ +F +M + + ++N +I
Sbjct: 527 AWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIR 586
Query: 428 AFARHGDGSRALQFYEEMRVGGIA 451
A GD +++++ EE++ G +
Sbjct: 587 AHLGDGDATKSVKLIEELKRCGFS 610
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/324 (19%), Positives = 142/324 (43%), Gaps = 21/324 (6%)
Query: 202 FCQGRQVFDEMIERNVVTWTAVISGLAQNELYEDGLRLFAQMRGGSVSPNTLTYLSSLMA 261
FC R F +RN+ + SGL + +D + LF M P + + A
Sbjct: 40 FCCERG-FSAFSDRNLSYRERLRSGLVDIK-ADDAIDLFRDMIHSRPLPTVIDFSRLFSA 97
Query: 262 CSGVQALAEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEGAW----QIFESAEELD 317
+ + + + G+ +L S +++ + +C L A+ +I + E +
Sbjct: 98 IAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPN 157
Query: 318 GVSLTVILVAFAQNGFEEEAIQIFTRIVTLGIEVDANMVSAVLGVFGVGTSLPLGKQIHS 377
++ + ++ G EA+++ R+V +G + D ++ + V G+ S GK+ +
Sbjct: 158 TITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTL--VNGLCLS---GKEAEA 212
Query: 378 LIIKKNFSQ-----NPFVSNGLINMYSKCGELHDSLQVFYEMTQKN----SISWNSVIAA 428
+++ + N ++N+ K G+ ++++ +M ++N ++ ++ +I
Sbjct: 213 MLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 429 FARHGDGSRALQFYEEMRVGGIAPTDVTFLSLLHACSHAGLVEKGMEFLVSMTRDHRLSP 488
+HG A + EM + GI +T+ L+ +AG + G + L M + +++P
Sbjct: 273 LCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIK-RKINP 331
Query: 489 RSEHYACVVDMLGRAGLLKEAKNF 512
++ ++D + G L+EA+
Sbjct: 332 NVVTFSVLIDSFVKEGKLREAEEL 355