Miyakogusa Predicted Gene

Lj1g3v4931590.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4931590.1 tr|C1MTI9|C1MTI9_MICPC DnaJ domain protein
OS=Micromonas pusilla (strain CCMP1545)
GN=MICPUCDRAFT_58,33.61,6e-19,DnaJ molecular chaperone homology
domain,Heat shock protein DnaJ, N-terminal; DNAJ_2,Heat shock
prot,CUFF.33669.1
         (253 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G05345.1 | Symbols:  | Chaperone DnaJ-domain superfamily prot...   272   2e-73
AT2G42750.1 | Symbols:  | DNAJ heat shock N-terminal domain-cont...    68   5e-12
AT5G23240.1 | Symbols:  | DNAJ heat shock N-terminal domain-cont...    56   2e-08

>AT3G05345.1 | Symbols:  | Chaperone DnaJ-domain superfamily protein
           | chr3:1522449-1523847 REVERSE LENGTH=244
          Length = 244

 Score =  272 bits (696), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 136/219 (62%), Positives = 163/219 (74%), Gaps = 5/219 (2%)

Query: 36  SCRGRDRDDAPLSTASAYAVLGVQHGCSGAEIKAAFRAKVKQFHPDVIRDENDRDSDSMI 95
           SCRG++R+D PLS++S Y++LGV+  CS +E+KAAFRAKVKQ+HPDV +D ++  SD MI
Sbjct: 30  SCRGKNRED-PLSSSSPYSILGVEPSCSSSELKAAFRAKVKQYHPDVNKDGSN--SDIMI 86

Query: 96  RRVIEAYRMLSNLSPSQIIEGECLDPFDTPECEAFDLFVNELYCVGKACSNSCVERAPHA 155
           RR+I+AY ML+N S S+IIEGECLDPFD PECEA D+FVNE+ CVGK CS  C E A H 
Sbjct: 87  RRIIQAYEMLTNYSRSEIIEGECLDPFDHPECEALDVFVNEVLCVGKRCSYPCFETASHV 146

Query: 156 FTYVSSTGTARASSQGRGEDYQVQQAVGQCPRNCIHYVTPSQRXXXXXXXXXXXXAPYDI 215
           F+   S+GTARA SQG GEDY+VQ AV QCPRNCIHYVTPSQR             PYD 
Sbjct: 147 FS-CDSSGTARAMSQGHGEDYRVQSAVNQCPRNCIHYVTPSQRIILEELLDSVVDKPYDC 205

Query: 216 SAEADLLYSLITKAKFENNRYXX-XXXXXXTSTQHVDWF 253
           SAEA+ LY+LI KAKFENNRY         +S +HVDWF
Sbjct: 206 SAEAEFLYALIVKAKFENNRYQKPKKKQPESSGKHVDWF 244


>AT2G42750.1 | Symbols:  | DNAJ heat shock N-terminal
           domain-containing protein | chr2:17793404-17795419
           FORWARD LENGTH=344
          Length = 344

 Score = 68.2 bits (165), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 90/204 (44%), Gaps = 24/204 (11%)

Query: 12  GITPTFGNRT--------LPLFVKKNLPRACCSCRGRDRDDAPLSTASA----YAVLGVQ 59
           G +P F  +T        LP +  K    +    R    D + LST       YAVLG+ 
Sbjct: 25  GASPRFSAKTTGASSSWYLPRYAGKRRTDSIGRLRVATEDASSLSTGDVADDYYAVLGLL 84

Query: 60  HGCSGAEIKAAFRAKVKQFHPDVIRDENDRDSDSMIRRVIEAYRMLSNLSPSQI---IEG 116
              +  EIK A+   +K  HPD+    ND ++ +    + + Y +LS+     +   I G
Sbjct: 85  PDATQEEIKKAYYNCMKSCHPDL--SGNDPETTNFCMFINDIYEILSDPVQRMVYDEIHG 142

Query: 117 ---ECLDPFDTPECEAFDLFVNELYCVGKACSNSCVERAPHAFTYVSSTGTARASSQGRG 173
                ++PF         +FV+E  C+G  C N C   AP  F      G ARA +Q RG
Sbjct: 143 YTVTAINPFLDDSTPRDHVFVDEFACIG--CKN-CANVAPDIFQIEEDFGRARACNQ-RG 198

Query: 174 EDYQVQQAVGQCPRNCIHYVTPSQ 197
               VQQAV  CP +CIH  + +Q
Sbjct: 199 NPDLVQQAVETCPVDCIHQTSAAQ 222


>AT5G23240.1 | Symbols:  | DNAJ heat shock N-terminal
           domain-containing protein | chr5:7826857-7828534 REVERSE
           LENGTH=465
          Length = 465

 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 21/155 (13%)

Query: 53  YAVLGVQHGCSGAEIKAAFRAKVKQFHPDVIRDENDRDSDSMIRRVIEAYRMLSNLSPSQ 112
           Y +LG+      ++IK+A+RA  K+ HPD+  D        M   + EAY++LS+    Q
Sbjct: 52  YDLLGIDRSSDKSQIKSAYRALQKRCHPDIAGDPG----HDMAIILNEAYQLLSDPISRQ 107

Query: 113 I----------IEGECLDPFDT----PECEAFDLFVNELYCVGKACSNSCVERAPHAFTY 158
                      + G    P  +    PE E    FV+E+ CVG      C E+    F  
Sbjct: 108 AYDKEQAKLEELRGYTGKPIYSVWCGPETEQRAAFVDEVKCVGCLKCALCAEK---TFAI 164

Query: 159 VSSTGTARASSQGRGEDYQVQQAVGQCPRNCIHYV 193
            ++ G AR  +Q    + ++++A+  CP +CI  V
Sbjct: 165 ETAYGRARVVAQWADPESKIKEAIEACPVDCISMV 199