Miyakogusa Predicted Gene

Lj1g3v4931510.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4931510.1 tr|I1JRC2|I1JRC2_SOYBN Lipoxygenase OS=Glycine
max PE=3 SV=1,85.78,0,PLAT,Lipoxygenase, LH2;
Lipoxygenase,Lipoxygenase, C-terminal; PLTLPOXGNASE,Lipoxygenase,
plant; LIP,CUFF.33646.1
         (215 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G55020.1 | Symbols: LOX1, ATLOX1 | lipoxygenase 1 | chr1:2052...   305   1e-83
AT3G22400.1 | Symbols: LOX5 | PLAT/LH2 domain-containing lipoxyg...   269   1e-72
AT1G72520.1 | Symbols: LOX4 | PLAT/LH2 domain-containing lipoxyg...   145   2e-35
AT1G17420.1 | Symbols: LOX3 | lipoxygenase 3 | chr1:5977512-5981...   143   1e-34
AT3G45140.1 | Symbols: LOX2, ATLOX2 | lipoxygenase 2 | chr3:1652...   131   3e-31
AT1G67560.1 | Symbols: LOX6 | PLAT/LH2 domain-containing lipoxyg...    95   3e-20

>AT1G55020.1 | Symbols: LOX1, ATLOX1 | lipoxygenase 1 |
           chr1:20525798-20530143 FORWARD LENGTH=859
          Length = 859

 Score =  305 bits (781), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 146/204 (71%), Positives = 167/204 (81%), Gaps = 3/204 (1%)

Query: 12  SHSIRGTVVLMKKNVLDFNALSASFLDRLHEVVGKRVSLQLISAVQQDPGNGMKGKLGKP 71
           +  ++GTVVLMKKNVLDFN  +ASFLDRLHE +G +++L+L+S+   D  NG KGKLGK 
Sbjct: 18  TKKVKGTVVLMKKNVLDFNDFNASFLDRLHEFLGNKITLRLVSSDVTDSENGSKGKLGKA 77

Query: 72  AYLEDWITTITPLTAGESAFKVTFDWEEDIGTPGAFLIRNNHHSEFYLRSLTLEDVPGQG 131
           A+LEDWITTIT LTAGESAFKVTFD+E D G PGAFLIRN+H SEF L+SLTLEDVPG G
Sbjct: 78  AHLEDWITTITSLTAGESAFKVTFDYETDFGYPGAFLIRNSHFSEFLLKSLTLEDVPGHG 137

Query: 132 VIHFICNSWVYPAHKYEKDRIFFSNKSYLPSETPVPLLKYREEELESLRGDGRGELQEWD 191
            +H+ICNSW+YPA  Y  DR+FFSNK+YLP ETP  LLKYREEEL SLRG G GEL+EWD
Sbjct: 138 RVHYICNSWIYPAKHYTTDRVFFSNKTYLPHETPATLLKYREEELVSLRGTGEGELKEWD 197

Query: 192 RVYDYAYYNDLGDPDKGPQYARPV 215
           RVYDYAYYNDLG P K P   RPV
Sbjct: 198 RVYDYAYYNDLGVPPKNP---RPV 218


>AT3G22400.1 | Symbols: LOX5 | PLAT/LH2 domain-containing
           lipoxygenase family protein | chr3:7927011-7931167
           FORWARD LENGTH=886
          Length = 886

 Score =  269 bits (687), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 128/207 (61%), Positives = 161/207 (77%), Gaps = 6/207 (2%)

Query: 15  IRGTVVLMKKNVLDFNALSASFLDRLHEVVGKRVSLQLISAVQQDPGNGMKGKLGKPAYL 74
           I G VV+MKKN+LDF  + AS LDR++E++G+RVSL LIS+ Q DP N  +G+LGK A+L
Sbjct: 35  IEGEVVVMKKNLLDFKDVMASLLDRVNELLGRRVSLHLISSHQPDPANEKRGRLGKAAHL 94

Query: 75  EDWITTI-TPLTAGESAFKVTFDWEEDIGTPGAFLIRNNHHSEFYLRSLTLEDVP----G 129
           E W+T I T +TA E+AF VTFDW+E +G P AF+I+N+HHS+FYL+SLTL   P    G
Sbjct: 95  EKWVTKIKTSVTAEETAFGVTFDWDESMGPPAAFVIKNHHHSQFYLKSLTLRGFPDGEGG 154

Query: 130 QGVIHFICNSWVYPAHKYEKDRIFFSNKSYLPSETPVPLLKYREEELESLRGDGR-GELQ 188
              IHFICNSW+YP H+Y  DR+FFSNK+YLPSETP  + + REEEL++LRG+ + GE +
Sbjct: 155 ATAIHFICNSWIYPNHRYRSDRVFFSNKAYLPSETPELIKELREEELKNLRGNEKGGEFK 214

Query: 189 EWDRVYDYAYYNDLGDPDKGPQYARPV 215
           EWDRVYDYAYYNDLG PDKGP   RPV
Sbjct: 215 EWDRVYDYAYYNDLGAPDKGPDSVRPV 241


>AT1G72520.1 | Symbols: LOX4 | PLAT/LH2 domain-containing
           lipoxygenase family protein | chr1:27308611-27312589
           FORWARD LENGTH=926
          Length = 926

 Score =  145 bits (366), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 80/201 (39%), Positives = 111/201 (55%), Gaps = 4/201 (1%)

Query: 15  IRGTVVLMKKNVLDFNALSASFLDRLHEVVGKRVSLQLISAVQQDPGNGMKGKLGKPAYL 74
           +R    +  KN  DF       LD   + +G+ V L+L+S  Q DP    + K  K A L
Sbjct: 92  VRAVATVRNKNKEDFKETLVKHLDAFTDKIGRNVVLELMS-TQVDPKTN-EPKKSKAAVL 149

Query: 75  EDWITTITPLTAGESAFKVTFDWEEDIGTPGAFLIRNNHHSEFYLRSLTLEDVPGQGVIH 134
           +DW +  +   A    +   F  +   G+PGA  + N H  EF+L S+T+E     G +H
Sbjct: 150 KDW-SKKSNSKAERVHYTAEFTVDSAFGSPGAITVTNKHQKEFFLESITIEGF-ACGPVH 207

Query: 135 FICNSWVYPAHKYEKDRIFFSNKSYLPSETPVPLLKYREEELESLRGDGRGELQEWDRVY 194
           F CNSWV     +   RI F+N+ YLPSETP  L   RE+ELE+LRG+G+GE +  DR+Y
Sbjct: 208 FPCNSWVQSQKDHPSKRILFTNQPYLPSETPSGLRTLREKELENLRGNGKGERKLSDRIY 267

Query: 195 DYAYYNDLGDPDKGPQYARPV 215
           DY  YND+G+PD   + ARP 
Sbjct: 268 DYDVYNDIGNPDISRELARPT 288


>AT1G17420.1 | Symbols: LOX3 | lipoxygenase 3 | chr1:5977512-5981384
           FORWARD LENGTH=919
          Length = 919

 Score =  143 bits (360), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 78/200 (39%), Positives = 110/200 (55%), Gaps = 4/200 (2%)

Query: 15  IRGTVVLMKKNVLDFNALSASFLDRLHEVVGKRVSLQLISAVQQDPGNGMKGKLGKPAYL 74
           +R  V +  KN  D        LD   + +G+ + L+LIS  Q DP   +  K    A L
Sbjct: 86  VRAVVTVRNKNKEDLKETLVKHLDAFADKIGRNIVLELIS-TQLDPKTKLPKK-SNAAVL 143

Query: 75  EDWITTITPLTAGESAFKVTFDWEEDIGTPGAFLIRNNHHSEFYLRSLTLEDVPGQGVIH 134
           +DW +  +   A    +   F  +   G+PGA  + N H  EF+L S+T+E     G +H
Sbjct: 144 KDW-SKKSKTKAERVHYTAEFTVDAAFGSPGAITVMNKHQKEFFLESITIEGF-ALGPVH 201

Query: 135 FICNSWVYPAHKYEKDRIFFSNKSYLPSETPVPLLKYREEELESLRGDGRGELQEWDRVY 194
           F CNSWV     +   RIFF+N+ YLP+ETP  L   RE+EL++LRGDG G  +  DR+Y
Sbjct: 202 FPCNSWVQSQKDHPDKRIFFTNQPYLPNETPSGLRVLREKELKNLRGDGSGVRKLSDRIY 261

Query: 195 DYAYYNDLGDPDKGPQYARP 214
           D+  YNDLG+PDK  + +RP
Sbjct: 262 DFDVYNDLGNPDKSSELSRP 281


>AT3G45140.1 | Symbols: LOX2, ATLOX2 | lipoxygenase 2 |
           chr3:16525437-16529233 FORWARD LENGTH=896
          Length = 896

 Score =  131 bits (330), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 75/182 (41%), Positives = 109/182 (59%), Gaps = 17/182 (9%)

Query: 37  LDRLHEVVGKRVSLQLISAVQQDPGNGMKGKLGKPAYLEDWITTITPLTAGESAFKVTFD 96
           LD + ++ G+ + ++LISA           K  +   +ED+   +    A +  ++  F+
Sbjct: 95  LDDIADIRGRSLLVELISA-----------KTDQRITVEDYAQRVW-AEAPDEKYECEFE 142

Query: 97  WEEDIGTPGAFLIRNNHHSEFYLRSLTLEDVPGQGVIHFICNSWVYPAHKYEKDRIFFSN 156
             ED G  GA  I+N +H + +L+ + L+ +PG G I F C SWV P       RIFFS+
Sbjct: 143 MPEDFGPVGAIKIQNQYHRQLFLKGVELK-LPG-GSITFTCESWVAPKSVDPTKRIFFSD 200

Query: 157 KSYLPSETPVPLLKYREEELESLRGDGR---GELQEWDRVYDYAYYNDLGDPDKGPQYAR 213
           KSYLPS+TP PL KYR+EELE+L+G  R   GE  +++R+YDY  YND+GDPD  P+ AR
Sbjct: 201 KSYLPSQTPEPLKKYRKEELETLQGKNREEVGEFTKFERIYDYDVYNDVGDPDNDPELAR 260

Query: 214 PV 215
           PV
Sbjct: 261 PV 262


>AT1G67560.1 | Symbols: LOX6 | PLAT/LH2 domain-containing
           lipoxygenase family protein | chr1:25319926-25324117
           FORWARD LENGTH=917
          Length = 917

 Score = 95.1 bits (235), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 103/209 (49%), Gaps = 17/209 (8%)

Query: 12  SHSIRGTVVLMKKNVLDFNALSASFLDRLHEVVGKRVSLQLISA-VQQDPGNGMKG---- 66
           S ++   V + KK            L+   + +G+ + +QL+S  +  + G G K     
Sbjct: 79  SKTVTAVVKIRKKIKEKLTERFEHQLELFMKAIGQGMLIQLVSEEIDPETGKGRKSLESP 138

Query: 67  KLGKPAYLEDWITTITPLTAGESAFKVTFDWEEDIGTPGAFLIRNNHHSEFYLRSLTLED 126
            +G P  ++D    +         F   F    + G PGA L+ N   +E  L  + +ED
Sbjct: 139 VMGLPKAVKDPRYLV---------FTADFTVPINFGKPGAILVTNLLSTEICLSEIIIED 189

Query: 127 VPGQGVIHFICNSWVYPAHKYEKDRIFFSNKSYLPSETPVPLLKYREEELESLRGDGRGE 186
                 I F  N+W++  +   + RI F ++  LPSETP  + + RE++L S+RGDG+GE
Sbjct: 190 --STDTILFPANTWIHSKNDNPQARIIFRSQPCLPSETPDGIKELREKDLVSVRGDGKGE 247

Query: 187 LQEWDRVYDYAYYNDLGDPDKGPQYARPV 215
            +  +R+YDY  YNDLGDP K  +  RPV
Sbjct: 248 RKPHERIYDYDVYNDLGDPRKT-ERVRPV 275