Miyakogusa Predicted Gene
- Lj1g3v4921070.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4921070.1 tr|A2Q337|A2Q337_MEDTR DNA
(Cytosine-5)-methyltransferase 3A OS=Medicago truncatula
GN=MTR_7g113180 ,66.52,0,Tudor/PWWP/MBT,NULL; PWWP,PWWP;
coiled-coil,NULL; PWWP DOMAIN-CONTAINING PROTEIN,NULL; no
descriptio,CUFF.33627.1
(1119 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G27650.1 | Symbols: | Tudor/PWWP/MBT superfamily protein | c... 534 e-151
AT3G05430.1 | Symbols: | Tudor/PWWP/MBT superfamily protein | c... 306 4e-83
AT5G02950.1 | Symbols: | Tudor/PWWP/MBT superfamily protein | c... 114 3e-25
AT5G40340.1 | Symbols: | Tudor/PWWP/MBT superfamily protein | c... 104 3e-22
AT3G09670.2 | Symbols: | Tudor/PWWP/MBT superfamily protein | c... 100 5e-21
AT3G09670.1 | Symbols: | Tudor/PWWP/MBT superfamily protein | c... 100 5e-21
AT3G27860.1 | Symbols: | Tudor/PWWP/MBT superfamily protein | c... 100 1e-20
>AT5G27650.1 | Symbols: | Tudor/PWWP/MBT superfamily protein |
chr5:9785511-9789094 FORWARD LENGTH=1072
Length = 1072
Score = 534 bits (1375), Expect = e-151, Method: Compositional matrix adjust.
Identities = 409/1080 (37%), Positives = 541/1080 (50%), Gaps = 181/1080 (16%)
Query: 80 RAERFSGSDSKSLLTEFDEYVAAERNGVATRRDLEHSFEVGDLVWGKVKSHPWWPGHIFN 139
+ E+ SD KSLL+EFD+YVA+E+ G R L + FEVGDLVWGKVKSHPWWPGHIFN
Sbjct: 134 KEEKKGVSDYKSLLSEFDDYVASEKMGSGVSRALSYGFEVGDLVWGKVKSHPWWPGHIFN 193
Query: 140 EAFATPSVRRSRREGHVLVAFFGDCSYGWFEPEELIPFGPNFAEKSQQTNSRTFLKAVEE 199
EAFA+PSVRR RR HVLVAFFGD SYGWF+P ELIPF PN EKSQQT S+ F++AVEE
Sbjct: 194 EAFASPSVRRMRRIDHVLVAFFGDSSYGWFDPAELIPFEPNLEEKSQQTVSKHFVRAVEE 253
Query: 200 AVDEASXXXXXXXXXXXXNPDNFQPTNVQGYFSVDVPDYEPPGFYSEREIAKAREAFEPS 259
A DEAS NP NF+P+NV+ YF+VDVPDYE YS +I +R+ F P+
Sbjct: 254 AKDEASRRSALGLTCKCRNPYNFRPSNVEDYFAVDVPDYELQAVYSVDQIKNSRDKFLPA 313
Query: 260 KALDFVKQIALAPHDGNHGSMGFIMNKATVSAYRKAVFEQYDETYAQAFGVQPSRPS--- 316
+ + FVKQ+ALAP + + S+ F+ KA V A+RK+VFE++DETYAQAFG + R S
Sbjct: 314 ETISFVKQLALAPQECDPDSLKFMKKKAVVFAFRKSVFEEFDETYAQAFGTKSPRSSVST 373
Query: 317 -HPQNVPLHQPVRHPSRAPLSGPLVIAEAL-XXXXXXXXXXXXDNLKKDKYLFKRRDDPG 374
P N R P RAPLSGPLVIAE L + KKDKYL KRRD+ G
Sbjct: 374 LEPHN-------RAPPRAPLSGPLVIAETLGDLKSSKKPTKVKVSKKKDKYLLKRRDEAG 426
Query: 375 N-SLQVAYREETPDAA----------GGYILQKRTPSVPVMPYNLEKSTEAGFISPDIAA 423
+ S+Q E + +A+ G + LQ+R P++ P EKS G +S D A+
Sbjct: 427 DKSVQFGEIEASSEASHIQGIDGSLDGDFGLQRRAPTLQT-PMKDEKS---GIVSMDFAS 482
Query: 424 STSDAKEALIGQVQADGHSLTSQAISSDAKPHPDMGKESSDKMTHRFEKDSVSIKNMGRS 483
S + A+ G+ S +KP D K ++K R E+ + + G+S
Sbjct: 483 SNT----AIPGKE------------FSASKPSLDEEKGLAEKSKERMEERAAVLPEHGKS 526
Query: 484 DLSSTVDESSQSSHLESKISVDAIHDEYAKVSGPSEDIKEAEQGLLTVVDGGNDMHPVKS 543
+ ++ +K E+ + G+ + P+
Sbjct: 527 EAMAS--------------------------------LKPKEEAGTDLGSAGSSLQPLLE 554
Query: 544 ENI--VKAKLLKNSAVKKIKGHKRPAGDLNSVTSATGERXXXXXXDLNLQPMSDHLEKHS 601
+ + K S +KK+K KR + +++S + +P SDH K
Sbjct: 555 SHTSASEGKSSTGSVIKKVKVAKRSSSEMSSENPPS---EPKKKKKKKKEPDSDHPVKRK 611
Query: 602 TSVKFVHLPGKPGSTDLAPREGFQTEQVQADVNARNLLPMDTLEDVNSEXXXXXXXXXXX 661
G+ G+ L+ + G Q + + LL L+D++ +
Sbjct: 612 NLYS-----GEAGAKKLS-QLGSAHLQTYMEADVPQLL--SHLQDLSLD----------- 652
Query: 662 XXXXFHGSVRKIPAVVRKFFLRFRSLVYQKSLVLSPPSENETPEVRVTKSPASIRISDSP 721
FHG RKFFLRFRSL YQKSL +S S+ R TK
Sbjct: 653 ---PFHGLSVASFGTARKFFLRFRSLNYQKSLSVS-SSDATVENARDTK----------- 697
Query: 722 DDHVRASPPVKRIVRPDDPTKAGRKRAPSDRQEEXXXXXXXXXXXXXXXXXXXXXXXXXX 781
S PVK + R +DP+KAG+KR SDRQ+E
Sbjct: 698 -----PSKPVKTVKRTEDPSKAGKKRLSSDRQDE------------------------IP 728
Query: 782 XXXXXXXXXXXQSQAPAKFV---KPDSYSQSQAPSKFV--KP--GSAKKMNRPS-KTVEP 833
+S A K + DS + PS+ V KP G K PS K VEP
Sbjct: 729 SAKKLKKTNQLKSMASEKKIIREAKDSIKPIREPSRVVQAKPARGQTGKKTAPSVKVVEP 788
Query: 834 TTLVIKFPPQTSLPSVAELKARFARFGPMDQSGFRVFWKSLTCRVVFLHKADALAAYKYS 893
T LV+KFPP TSLPS A LKARF RFG +DQS RVFWKS TCRVVFL+KADA A++Y+
Sbjct: 789 TMLVMKFPPGTSLPSAALLKARFGRFGLLDQSAIRVFWKSSTCRVVFLYKADAQTAFRYA 848
Query: 894 VANQSLFGSGGVRCFLRESEDSAPEVSEAAKVRGDDGTNETPRVKDPVVHRPASVSSSHQ 953
N +LFG+ V+ FLR+ + E E + DD + P +H+P
Sbjct: 849 TGNNTLFGNVNVKYFLRDVDAPKAEPREPENTKEDDEPQSQWLDQAPPLHQPT------- 901
Query: 954 PLPQPAIPLKSCLKKSTGDEPGQVAGNGSISKGNPRVKFMLGGEESSRGEQL----MVGN 1009
LP P + LKSCLKK D+P + NG+ ++ RVKFMLGGEE+S +
Sbjct: 902 -LPPPNVNLKSCLKKPV-DDPSSSSNNGNGNRAAVRVKFMLGGEENSSKANTEPPQVTMT 959
Query: 1010 KNYNNASFADDGGAPPFAMDFNSKNVQKVT--SQLPPPIIPLATKNPQHNMRNFELAMAP 1067
N N+ + P M+F SK Q V QLPP +P P + +L + P
Sbjct: 960 LNRNSGPSSSSSSVP---MEFVSKKFQNVVHHQQLPPSTLPPILPLPPQYTKPQQLPIKP 1016
Query: 1068 RN--------SPNFINXXXXXXXXXXPVDISQQMITLLTRCSDVVTNLTGLLGYVPYHQL 1119
+ S NF DIS QM+ LL++C++VV N+TGLLGYVPYH L
Sbjct: 1017 VDHVEPPMPPSRNFRGPIPAVSAG----DISHQMLNLLSKCNEVVANVTGLLGYVPYHPL 1072
>AT3G05430.1 | Symbols: | Tudor/PWWP/MBT superfamily protein |
chr3:1567745-1571037 FORWARD LENGTH=965
Length = 965
Score = 306 bits (785), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 162/349 (46%), Positives = 214/349 (61%), Gaps = 16/349 (4%)
Query: 88 DSKSLLTEFDEYVAAERNGVATRRDLEHSFEVGDLVWGKVKSHPWWPGHIFNEAFATPSV 147
D KS L+EFD+YVA E+ G + L + FEVGD+VWGKVKSHPWWPG IFNEAFA+PSV
Sbjct: 104 DYKSFLSEFDDYVAREKMGSRNSKALSYGFEVGDMVWGKVKSHPWWPGQIFNEAFASPSV 163
Query: 148 RRSRREGHVLVAFFGDCSYGWFEPEELIPFGPNFAEKSQQTNSRTFLKAVEEAVDEASXX 207
RR ++ G+VLVAFFGD SYGWF+P ELIPF P+ EKSQQT+S F KAVEEA++E
Sbjct: 164 RRVKKMGYVLVAFFGDNSYGWFDPAELIPFEPHVKEKSQQTSSDHFAKAVEEAMNEVGRR 223
Query: 208 XXXXXXXXXXNPDNFQPTNVQGYFSVDVPDYEPPGFYSEREIAKAREAFEPSKALDFVKQ 267
N NF+P N QGYF+VDVPDYE YS ++I KAR++F + L FVK+
Sbjct: 224 SALGLTCKCRNQYNFRPINAQGYFAVDVPDYEVQAIYSSKQIQKARDSFSSVQTLAFVKR 283
Query: 268 IALAPHDGNHGSMGFIMNKATVSAYRKAVFEQYDETYAQAFGVQPSRPSHPQNVPLHQPV 327
ALAP + + S+ K V A+R+AVFE++DETY QAF + + PL+
Sbjct: 284 CALAPQECDTDSLKSFQKKVAVCAFRRAVFEEFDETYEQAFRARSVYCLMKTHEPLN--- 340
Query: 328 RHPSRAPLSGPLVIAEALXX-XXXXXXXXXXDNLKKDKYLFKRRDDPGN-SLQVAYREET 385
R P R PLSG LV AE L D+ K+DKYL KRR++ G+ ++Q +E+
Sbjct: 341 RAPLRVPLSGSLVSAETLGNPKSYTKAMNVKDSTKQDKYLPKRREEAGDMTVQFGQVQES 400
Query: 386 PD-------AAGGYILQKRTPSVPVMPYNLEKSTEAGFISPDIAASTSD 427
+A +LQ+RTP + K + G +S + +S+ +
Sbjct: 401 SQFQGINGSSAWDRLLQRRTPCLQTP----RKHEQTGLVSMNFTSSSGN 445
Score = 171 bits (433), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 145/459 (31%), Positives = 187/459 (40%), Gaps = 108/459 (23%)
Query: 666 FHGSVRKIPAVVRKFFLRFRSLVYQKSLVLSPPSENETPEVRVTKSPASIRISDSPDDHV 725
F S R V+R+FF FRS VYQKSL SP +
Sbjct: 610 FGSSDRSSFRVIRQFFFHFRSHVYQKSLATSPSA-------------------------T 644
Query: 726 RASPPVKRIVRPDDPTKAGRKRAPSDRQEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 785
+ S K + R ++ +KAGR R SD Q++
Sbjct: 645 KLSKSAKTLCRANEQSKAGRNRISSDSQQDVPSTKKLKKTIQFKPLASDKKTNQDATKRS 704
Query: 786 XXXXXXXQSQAPAKFVKPDSYSQSQAPSKFVKPGSAKKMNRPSKTVEPTTLVIKFPPQTS 845
S AP V+ A V+ KK + VEPT LV+ FPP S
Sbjct: 705 --------SLAPLNPVRDQCRVPINAKPAIVQ--QEKKTGPSAMVVEPTMLVMMFPPGES 754
Query: 846 LPSVAELKARFARFGPMDQSGFRVFWKSLTCRVVFLHKADALAAYKYSVANQSLFGSGGV 905
LPS+ LKARF RFG +DQS RV WKS CRV FL+K DA A +Y ++SLFG+ V
Sbjct: 755 LPSIDLLKARFGRFGQLDQSAIRVSWKSSICRVGFLYKLDAQTALRYVSGSKSLFGNVNV 814
Query: 906 RCFLRESEDSAPEVSEAAKVRGDDGTNETPRVKDPVVHRPAS-----VSSSHQPLPQPAI 960
FLR+ + S+ G +E + K P +P + + P+ QP I
Sbjct: 815 TYFLRDMKASSA-----------SGDHELKKAKRPKTDKPITKPLNQLLEQAPPVHQPNI 863
Query: 961 PLKSCLKKSTGDEPGQVAGNGSISKGNPRVKFMLGGEESSRGEQLMVGNKNYNNASFADD 1020
LKSCLKK PG N + + RVKFMLG +E+ + +
Sbjct: 864 QLKSCLKK-----PG---NNRNGNHRTVRVKFMLGEKETESPFSVSI------------- 902
Query: 1021 GGAPPFAMDFNSKNVQKVTSQLPPPIIPLATKNPQHNMRNFELAMAPRNSPNFINXXXXX 1080
P + D K V + PP+ P K
Sbjct: 903 --LPLSSQDSEPKPVNNQVDHVEPPLDPSQLK---------------------------- 932
Query: 1081 XXXXXPVDISQQMITLLTRCSDVVTNLTGLLGYVPYHQL 1119
VDIS QM+ LLTRC+D V N+TGLLGYVPYH L
Sbjct: 933 ------VDISLQMMELLTRCNDAVANVTGLLGYVPYHSL 965
>AT5G02950.1 | Symbols: | Tudor/PWWP/MBT superfamily protein |
chr5:690953-692851 FORWARD LENGTH=632
Length = 632
Score = 114 bits (286), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 99/174 (56%), Gaps = 2/174 (1%)
Query: 121 DLVWGKVKSHPWWPGHIFNEAFATPSVRRSRREGHVLVAFFGDCSYGWFEPEELIPFGPN 180
DLVW K++S+PWWPG +F+++ A+ + R ++G+VLVA+FGDC++ W ++ PF N
Sbjct: 99 DLVWAKLRSYPWWPGLVFDKSVASKAAMRHFKKGNVLVAYFGDCTFAWNNASQIKPFHQN 158
Query: 181 FAEKSQQTNSRTFLKAVEEAVDEASXXXXXXXXXXXXNPDNFQPTNVQGYFSVDVPDYEP 240
F++ +Q+NS F A++ A+DE S + + + Q + + + +
Sbjct: 159 FSQMQEQSNSAEFRDAIDCALDEVSRRVEFGLSCSCVSEEAYNKLKTQNIINAGIRE-DS 217
Query: 241 PGFYSEREIAKAREAFEPSKALDFVKQIALAPHDGNHGSMGFIMNKATVSAYRK 294
Y +++ +FEP+K +D++K +A P + F++N+A V A+++
Sbjct: 218 SVRYGGDKLSDGI-SFEPAKLVDYMKHLACFPCYDATEKLQFVINRAQVLAFQQ 270
>AT5G40340.1 | Symbols: | Tudor/PWWP/MBT superfamily protein |
chr5:16131654-16134680 REVERSE LENGTH=1008
Length = 1008
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 63/89 (70%)
Query: 115 HSFEVGDLVWGKVKSHPWWPGHIFNEAFATPSVRRSRREGHVLVAFFGDCSYGWFEPEEL 174
H + VGD VWGK+K+HPWWPG I++ + A+ + +++G +LVA FGD ++ W +L
Sbjct: 123 HGYCVGDFVWGKIKNHPWWPGQIYDPSDASDLALKIKQKGKLLVACFGDGTFAWCGASQL 182
Query: 175 IPFGPNFAEKSQQTNSRTFLKAVEEAVDE 203
PF +F E S+ +NSR+FL AVEEAV+E
Sbjct: 183 KPFAESFKECSKVSNSRSFLGAVEEAVEE 211
>AT3G09670.2 | Symbols: | Tudor/PWWP/MBT superfamily protein |
chr3:2966637-2968817 FORWARD LENGTH=726
Length = 726
Score = 100 bits (250), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 94/174 (54%), Gaps = 2/174 (1%)
Query: 121 DLVWGKVKSHPWWPGHIFNEAFATPSVRRSRREGHVLVAFFGDCSYGWFEPEELIPFGPN 180
DLVW KV+SHPWWPG +F+ + AT ++ ++G LV +FGDC++ W E + PF +
Sbjct: 201 DLVWAKVRSHPWWPGQVFDASAATDKAKKHFKKGSFLVTYFGDCTFAWNEASRIKPFRQH 260
Query: 181 FAEKSQQTNSRTFLKAVEEAVDEASXXXXXXXXXXXXNPDNFQPTNVQGYFSVDVPDYEP 240
F++ ++Q++ F+ A++ A++E S + + +Q Q + + + +
Sbjct: 261 FSQMAKQSSLPDFIDAIDFALEEVSRRIEFGLACSCISEEVYQKIKTQNVINPGIRE-DS 319
Query: 241 PGFYSEREIAKAREAFEPSKALDFVKQIALAPHDGNHGSMGFIMNKATVSAYRK 294
+ +++ A FEP+ + +VK++A +P ++ + +A + A+ +
Sbjct: 320 SSIHGGDKVSSAV-FFEPANLVGYVKRLACSPSYDATDALQLVSQRAQLLAFNR 372
>AT3G09670.1 | Symbols: | Tudor/PWWP/MBT superfamily protein |
chr3:2966637-2968817 FORWARD LENGTH=726
Length = 726
Score = 100 bits (250), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 94/174 (54%), Gaps = 2/174 (1%)
Query: 121 DLVWGKVKSHPWWPGHIFNEAFATPSVRRSRREGHVLVAFFGDCSYGWFEPEELIPFGPN 180
DLVW KV+SHPWWPG +F+ + AT ++ ++G LV +FGDC++ W E + PF +
Sbjct: 201 DLVWAKVRSHPWWPGQVFDASAATDKAKKHFKKGSFLVTYFGDCTFAWNEASRIKPFRQH 260
Query: 181 FAEKSQQTNSRTFLKAVEEAVDEASXXXXXXXXXXXXNPDNFQPTNVQGYFSVDVPDYEP 240
F++ ++Q++ F+ A++ A++E S + + +Q Q + + + +
Sbjct: 261 FSQMAKQSSLPDFIDAIDFALEEVSRRIEFGLACSCISEEVYQKIKTQNVINPGIRE-DS 319
Query: 241 PGFYSEREIAKAREAFEPSKALDFVKQIALAPHDGNHGSMGFIMNKATVSAYRK 294
+ +++ A FEP+ + +VK++A +P ++ + +A + A+ +
Sbjct: 320 SSIHGGDKVSSAV-FFEPANLVGYVKRLACSPSYDATDALQLVSQRAQLLAFNR 372
>AT3G27860.1 | Symbols: | Tudor/PWWP/MBT superfamily protein |
chr3:10326128-10328086 FORWARD LENGTH=652
Length = 652
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 6/106 (5%)
Query: 104 RNGVATRRD----LEHSFEVGDLVWGK-VKSHPWWPGHIFNEAFATPSVRRSRREGHVLV 158
R+GV++ RD LE+ F VGD VWG+ S WWPG I++ A+ ++ ++G +LV
Sbjct: 44 RSGVSSLRDNFEELENGFHVGDFVWGEEANSQQWWPGQIYDSLDASDLALKTMQKGKLLV 103
Query: 159 AFFGDCSY-GWFEPEELIPFGPNFAEKSQQTNSRTFLKAVEEAVDE 203
A+FGD S+ GW P EL PF NF E S+ ++SR FL AVE+AV E
Sbjct: 104 AYFGDGSFFGWCNPLELKPFLENFKEFSKMSDSRRFLLAVEDAVRE 149