Miyakogusa Predicted Gene
- Lj1g3v4918600.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4918600.1 Non Chatacterized Hit- tr|C5YPL3|C5YPL3_SORBI
Putative uncharacterized protein Sb08g017670
OS=Sorghu,27.52,3e-18,seg,NULL; no description,NULL; SUBFAMILY NOT
NAMED,NULL; F-BOX/LEUCINE RICH REPEAT PROTEIN,NULL; RNI,CUFF.33597.1
(560 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G27920.1 | Symbols: | F-box family protein | chr5:9942063-99... 519 e-147
AT5G01720.1 | Symbols: | RNI-like superfamily protein | chr5:26... 310 3e-84
AT4G15475.1 | Symbols: | F-box/RNI-like superfamily protein | c... 130 2e-30
AT1G77000.2 | Symbols: SKP2B | RNI-like superfamily protein | ch... 103 3e-22
AT1G77000.1 | Symbols: ATSKP2;2, SKP2B | RNI-like superfamily pr... 103 3e-22
AT2G25490.1 | Symbols: EBF1, FBL6 | EIN3-binding F box protein 1... 102 7e-22
AT1G21410.1 | Symbols: SKP2A | F-box/RNI-like superfamily protei... 95 1e-19
AT5G25350.1 | Symbols: EBF2 | EIN3-binding F box protein 2 | chr... 92 1e-18
AT5G23340.1 | Symbols: | RNI-like superfamily protein | chr5:78... 82 9e-16
AT3G58530.1 | Symbols: | RNI-like superfamily protein | chr3:21... 72 1e-12
AT1G80630.1 | Symbols: | RNI-like superfamily protein | chr1:30... 72 1e-12
AT5G67250.1 | Symbols: SKIP2, VFB4 | SKP1/ASK1-interacting prote... 58 2e-08
AT1G55590.1 | Symbols: | RNI-like superfamily protein | chr1:20... 57 3e-08
AT4G33210.1 | Symbols: SLOMO | F-box family protein | chr4:16015... 55 9e-08
AT3G07550.2 | Symbols: | RNI-like superfamily protein | chr3:24... 55 2e-07
AT3G07550.1 | Symbols: | RNI-like superfamily protein | chr3:24... 55 2e-07
AT2G36370.1 | Symbols: | ubiquitin-protein ligases | chr2:15247... 54 2e-07
AT1G80570.1 | Symbols: | RNI-like superfamily protein | chr1:30... 53 5e-07
AT1G80570.3 | Symbols: | RNI-like superfamily protein | chr1:30... 53 5e-07
AT1G80570.2 | Symbols: | RNI-like superfamily protein | chr1:30... 53 5e-07
AT4G30640.1 | Symbols: | RNI-like superfamily protein | chr4:14... 52 8e-07
AT1G15740.1 | Symbols: | Leucine-rich repeat family protein | c... 49 7e-06
>AT5G27920.1 | Symbols: | F-box family protein |
chr5:9942063-9944507 REVERSE LENGTH=642
Length = 642
Score = 519 bits (1336), Expect = e-147, Method: Compositional matrix adjust.
Identities = 292/559 (52%), Positives = 377/559 (67%), Gaps = 2/559 (0%)
Query: 3 SESVFCLLTEDLLIRILDKLGSD-RKPWRLVCKEFLRVESLTRNSVRILRIEFLLGLLQK 61
S S+ +L+EDLL+R+ + L RK WRL+ K+FLRV+SLTR ++RILR+EFL LL K
Sbjct: 4 SPSILSVLSEDLLVRVYECLDPPCRKTWRLISKDFLRVDSLTRTTIRILRVEFLPTLLFK 63
Query: 62 CCNIETLDLSWCPRIDDGTVSVLLSQGSLSWTRGLRRLVLSRATGVGHVGLELLVRACPL 121
N+ +LDLS CP++DD V L G++S T G++ L LSR+T V GLE L R C
Sbjct: 64 YPNLSSLDLSVCPKLDDDVVLRLALDGAIS-TLGIKSLNLSRSTAVRARGLETLARMCHA 122
Query: 122 LEAVDVSHCWGYGDREAAALSCAARLRELNMDKCLGLTDIGLAQIAVGCSRLESLSLKWC 181
LE VDVSHCWG+GDREAAALS A LREL MDKCL L+D+GLA+I VGCS L +SLKWC
Sbjct: 123 LERVDVSHCWGFGDREAAALSSATGLRELKMDKCLSLSDVGLARIVVGCSNLNKISLKWC 182
Query: 182 LEISDLGIDXXXXXXXXXXXXDVSYLKVTSESLRSIASLLKLERLIMVGCYLVDDVGLRF 241
+EISDLGID DVSYLK+T++S+RSIA L+KLE L MV C L+DD GL+F
Sbjct: 183 MEISDLGIDLLCKICKGLKSLDVSYLKITNDSIRSIALLVKLEVLDMVSCPLIDDGGLQF 242
Query: 242 LGNGCPLLKTIDVSRCNCVSSSGAISVITGHHGLEQMAAGYCLFEFSAPLVDCLETLKCL 301
L NG P L+ +DV+RC+ VS SG IS++ GH ++ + A +C+ E S + ++ LK L
Sbjct: 243 LENGSPSLQEVDVTRCDRVSLSGLISIVRGHPDIQLLKASHCVSEVSGSFLKYIKGLKHL 302
Query: 302 SIIRIDGVRVSDFILQTIGTNCKSLVELGLSKCTGVTDIGITQIVSGCGNLKMIDLTCCR 361
I IDG VSD L ++ ++C+SL+E+GLS+C VTDIG+ + C NLK ++L CC
Sbjct: 303 KTIWIDGAHVSDSSLVSLSSSCRSLMEIGLSRCVDVTDIGMISLARNCLNLKTLNLACCG 362
Query: 362 YVXXXXXXXXXXXCPYLVCLKLESCDMVTENGLYRLGSNXXXXXXXXXXXXSGMNDTALK 421
+V C L LKLESC ++TE GL LG G+ND L+
Sbjct: 363 FVTDVAISAVAQSCRNLGTLKLESCHLITEKGLQSLGCYSMLVQELDLTDCYGVNDRGLE 422
Query: 422 YLSRCSELVRLKLGLCTNISDIGLAHIAFNCPKMSELDLYRCVCIGDDGLAGLADRCKKL 481
Y+S+CS L RLKLGLCTNISD G+ HI C K+ ELDLYRC GDDGLA L+ CK L
Sbjct: 423 YISKCSNLQRLKLGLCTNISDKGIFHIGSKCSKLLELDLYRCAGFGDDGLAALSRGCKSL 482
Query: 482 IKLNVSYCKRITDRGMEYISHLAELSDLEMRGLSSITSIGVKAVAIGCTRLADLDLKQCE 541
+L +SYC +TD G+E I L LS LE+RGL +IT +G+ A+A GC +L LD+K CE
Sbjct: 483 NRLILSYCCELTDTGVEQIRQLELLSHLELRGLKNITGVGLAAIASGCKKLGYLDVKLCE 542
Query: 542 KVDDSGFCALAFYSQNLRQ 560
+DDSGF ALA++S+NLRQ
Sbjct: 543 NIDDSGFWALAYFSKNLRQ 561
>AT5G01720.1 | Symbols: | RNI-like superfamily protein |
chr5:267118-270391 REVERSE LENGTH=665
Length = 665
Score = 310 bits (793), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 212/557 (38%), Positives = 313/557 (56%), Gaps = 8/557 (1%)
Query: 7 FCLLTEDLLIRILDKLG---SDRKPWRLVCKEFLRVESLTRNSVRILRIEFLLGLLQKCC 63
F LL+E+L+ ILD + SD K + L CK F ++ES R S++ LR ++L +L +
Sbjct: 13 FDLLSEELVFIILDLISPNPSDLKSFSLTCKSFYQLESKHRGSLKPLRSDYLPRILTRYR 72
Query: 64 NIETLDLSWCPRIDDGTVSVLLSQGSLSWTRGLRRLVLSRATGVGHVGLELLVRACPLLE 123
N LDL++CPR+ D +SV+ G LS LR L LSR+ GL L C L
Sbjct: 73 NTTDLDLTFCPRVTDYALSVV---GCLSGPT-LRSLDLSRSGSFSAAGLLRLALKCVNLV 128
Query: 124 AVDVSHCWGYGDREAAALSCAARLRELNMDKCLGLTDIGLAQIAVGCSRLESLSLKWCLE 183
+D+S+ D +AA ++ A L L + +C LTD+G+ IAVGC +L ++SLKWC+
Sbjct: 129 EIDLSNATEMRDADAAVVAEARSLERLKLGRCKMLTDMGIGCIAVGCKKLNTVSLKWCVG 188
Query: 184 ISDLGIDXXXXXXXXXXXXDVSYLKVTSESLRSIASLLKLERLIMVGCYLVDDVGLRFLG 243
+ DLG+ D+SYL +T + L I L LE L++ GC+ VDD L+ L
Sbjct: 189 VGDLGVGLLAVKCKDIRTLDLSYLPITGKCLHDILKLQHLEELLLEGCFGVDDDSLKSLR 248
Query: 244 NGCPLLKTIDVSRCNCVSSSGAISVITGHHGLEQMAAGYCLFEFSAPLVDCLETLKCLSI 303
+ C LK +D S C ++ G S+++G L+++ +C S L+ + L
Sbjct: 249 HDCKSLKKLDASSCQNLTHRGLTSLLSGAGYLQRLDLSHCSSVISLDFASSLKKVSALQS 308
Query: 304 IRIDGVRVSDFILQTIGTNCKSLVELGLSKCTGVTDIGITQIVSGCGNLKMIDLTCCRYV 363
IR+DG V+ L+ IGT C SL E+ LSKC VTD G++ +V +L+ +D+TCCR +
Sbjct: 309 IRLDGCSVTPDGLKAIGTLCNSLKEVSLSKCVSVTDEGLSSLVMKLKDLRKLDITCCRKL 368
Query: 364 XXXXXXXXXXXCPYLVCLKLESCDMVTENGLYRLGSNXXXXXXXXXXXXSGMNDTALKYL 423
CP LV LK+ESC +V+ + +G ++D LK +
Sbjct: 369 SRVSITQIANSCPLLVSLKMESCSLVSREAFWLIGQKCRLLEELDLTDNE-IDDEGLKSI 427
Query: 424 SRCSELVRLKLGLCTNISDIGLAHIAFNCPKMSELDLYRCVCIGDDGLAGLADRCKKLIK 483
S C L LKLG+C NI+D GL++I C + ELDLYR V I D G++ +A C L
Sbjct: 428 SSCLSLSSLKLGICLNITDKGLSYIGMGCSNLRELDLYRSVGITDVGISTIAQGCIHLET 487
Query: 484 LNVSYCKRITDRGMEYISHLAELSDLEMRGLSSITSIGVKAVAIGCTRLADLDLKQCEKV 543
+N+SYC+ ITD+ + +S + L E RG +ITS G+ A+A+ C RLA +DLK+C +
Sbjct: 488 INISYCQDITDKSLVSLSKCSLLQTFESRGCPNITSQGLAAIAVRCKRLAKVDLKKCPSI 547
Query: 544 DDSGFCALAFYSQNLRQ 560
+D+G ALA +SQNL+Q
Sbjct: 548 NDAGLLALAHFSQNLKQ 564
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 125/502 (24%), Positives = 207/502 (41%), Gaps = 114/502 (22%)
Query: 56 LGLLQ-KCCNIETLDLSWCP------------------------RIDDGTVSVLLSQGSL 90
+GLL KC +I TLDLS+ P +DD ++ L
Sbjct: 194 VGLLAVKCKDIRTLDLSYLPITGKCLHDILKLQHLEELLLEGCFGVDDDSLKSLRHD--- 250
Query: 91 SWTRGLRRLVLSRATGVGHVGLELLVRACPLLEAVDVSHCWGYGDRE-AAALSCAARLRE 149
+ L++L S + H GL L+ L+ +D+SHC + A++L + L+
Sbjct: 251 --CKSLKKLDASSCQNLTHRGLTSLLSGAGYLQRLDLSHCSSVISLDFASSLKKVSALQS 308
Query: 150 LNMDKCLGLTDIGLAQIAVGCSRLESLSLKWCLEISDLGIDXXXXXXXXXXXXDVSY-LK 208
+ +D C +T GL I C+ L+ +SL C+ ++D G+ D++ K
Sbjct: 309 IRLDGC-SVTPDGLKAIGTLCNSLKEVSLSKCVSVTDEGLSSLVMKLKDLRKLDITCCRK 367
Query: 209 VTSESLRSIA-SLLKLERLIMVGCYLVDDVGLRFLGNGCPLLKTIDVSRCNCVSSSGAIS 267
++ S+ IA S L L M C LV +G C LL+ +D++ N + G S
Sbjct: 368 LSRVSITQIANSCPLLVSLKMESCSLVSREAFWLIGQKCRLLEELDLTD-NEIDDEGLKS 426
Query: 268 VITGHHGLEQMAAGYCLFEFSAPLVDCLETLKCLSIIRIDGVRVSDFILQTIGTNCKSLV 327
+ + L + G CL ++D L IG C +L
Sbjct: 427 ISSCLS-LSSLKLGICL-------------------------NITDKGLSYIGMGCSNLR 460
Query: 328 ELGLSKCTGVTDIGITQIVSGCGNLKMIDLTCCRYVXXXXXXXXXXXCPYLVCLKLESCD 387
EL L + G+TD+GI+ I GC +L+ I+++ C+ +
Sbjct: 461 ELDLYRSVGITDVGISTIAQGCIHLETINISYCQDI------------------------ 496
Query: 388 MVTENGLYRLGSNXXXXXXXXXXXXSGMNDTALKYLSRCSELVRLKLGLCTNISDIGLAH 447
D +L LS+CS L + C NI+ GLA
Sbjct: 497 ----------------------------TDKSLVSLSKCSLLQTFESRGCPNITSQGLAA 528
Query: 448 IAFNCPKMSELDLYRCVCIGDDGLAGLADRCKKLIKLNVSYCKRITDRGMEYISHLAELS 507
IA C +++++DL +C I D GL LA + L ++NVS +T+ G+ ++++ L
Sbjct: 529 IAVRCKRLAKVDLKKCPSINDAGLLALAHFSQNLKQINVSDTA-VTEVGLLSLANIGCLQ 587
Query: 508 DLEMRGLSSITSIGVKAVAIGC 529
++ + S + GV A +GC
Sbjct: 588 NIAVVNSSGLRPSGVAAALLGC 609
>AT4G15475.1 | Symbols: | F-box/RNI-like superfamily protein |
chr4:8845927-8848701 FORWARD LENGTH=610
Length = 610
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 134/504 (26%), Positives = 211/504 (41%), Gaps = 62/504 (12%)
Query: 36 FLRVESLTRNSVRILRIEFLLGLLQKCCNIETLDLSWCPRIDDGTVSVLLSQGSLSWTRG 95
F R+E+L+ + L L QKC ++++LDL C D G +V + +
Sbjct: 139 FPRIENLSLIWCPNVSSVGLCSLAQKCTSLKSLDLQGCYVGDQGLAAVG------KFCKQ 192
Query: 96 LRRLVLSRATGVGHVGLELLVRACPL-LEAVDVSHCWGYGDREAAALSCAARLRELNMDK 154
L L L G+ VG+ LV C L+++ V+ D A+ +L E+
Sbjct: 193 LEELNLRFCEGLTDVGVIDLVVGCSKSLKSIGVAASAKITDLSLEAVGSHCKLLEVLYLD 252
Query: 155 CLGLTDIGLAQIAVGCSRLESLSLKWCLEISDLGIDXXXXXXXXXXXXDV-SYLKVTSES 213
+ D GL +A GC RL++L L+ C+ ++D+ + S+ T +
Sbjct: 253 SEYIHDKGLIAVAQGCHRLKNLKLQ-CVSVTDVAFAAVGELCTSLERLALYSFQHFTDKG 311
Query: 214 LRSIAS-LLKLERLIMVGCYLVDDVGLRFLGNGCPLLKTIDVSRCNCVSSSGAISVITGH 272
+R+I KL+ L + CY V GL + +GC L+ ++++ C+ + + G ++
Sbjct: 312 MRAIGKGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEINGCHNIGTRGIEAIGKSC 371
Query: 273 HGLEQMAAGYCLFEFSAPLVDCLETLKCLSIIRIDGVRVSDFILQTIGTNCKSLVELGLS 332
L+++A YC R+ + LQ IG CKSL L L
Sbjct: 372 PRLKELALLYC-------------------------QRIGNSALQEIGKGCKSLEILHLV 406
Query: 333 KCTGVTDIGITQIVSGCGNLKMIDLTCCRYVXXXXXXXXXXXCPYLVCLKLESCDMVTEN 392
C+G+ DI + I GC NLK + + C + C L L L CD V
Sbjct: 407 DCSGIGDIAMCSIAKGCRNLKKLHIRRCYEIGNKGIISIGKHCKSLTELSLRFCDKVGNK 466
Query: 393 GLYRLGSNXXXXXXXXXXXXSGMNDTALKYLSRCSELVRLKLGLCTNISDIGLAHIAFNC 452
L +G CS L +L + C ISD G+ IA C
Sbjct: 467 ALIAIGKG-------------------------CS-LQQLNVSGCNQISDAGITAIARGC 500
Query: 453 PKMSELDLYRCVCIGDDGLAGLADRCKKLIKLNVSYCKRITDRGMEYISHLAELSDL-EM 511
P+++ LD+ IGD LA L + C L L +S+C ITD G+ ++ +L + M
Sbjct: 501 PQLTHLDISVLQNIGDMPLAELGEGCPMLKDLVLSHCHHITDNGLNHLVQKCKLLETCHM 560
Query: 512 RGLSSITSIGVKAVAIGCTRLADL 535
ITS GV V C + +
Sbjct: 561 VYCPGITSAGVATVVSSCPHIKKV 584
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 125/490 (25%), Positives = 202/490 (41%), Gaps = 92/490 (18%)
Query: 65 IETLDLSWCPRIDDGTVSVLLSQGSLSWTRGLRRLVLSRATGVGHVGLELLVRACPLLEA 124
IE L L WCP + VGL L + C L++
Sbjct: 142 IENLSLIWCPNVSS-------------------------------VGLCSLAQKCTSLKS 170
Query: 125 VDVSHCWGYGDREAAAL-SCAARLRELNMDKCLGLTDIGLAQIAVGCSR-LESLSLKWCL 182
+D+ C+ GD+ AA+ +L ELN+ C GLTD+G+ + VGCS+ L+S+ +
Sbjct: 171 LDLQGCY-VGDQGLAAVGKFCKQLEELNLRFCEGLTDVGVIDLVVGCSKSLKSIGVAASA 229
Query: 183 EISDLGIDXXXXXXXXXXXXDVSYLKVTSESLRSIASLLKLERLIMVGCYLVDDVGLRFL 242
+I+DL SL ++ S KL ++ + + D GL +
Sbjct: 230 KITDL-------------------------SLEAVGSHCKLLEVLYLDSEYIHDKGLIAV 264
Query: 243 GNGCPLLKTIDVSRCNCVSSSGAISVITGH--HGLEQMAAGYCLFEFSAPLVDCLETLKC 300
GC LK + + CVS + G LE++A L+ F
Sbjct: 265 AQGCHRLKNLKL---QCVSVTDVAFAAVGELCTSLERLA----LYSFQ------------ 305
Query: 301 LSIIRIDGVRVSDFILQTIGTNCKSLVELGLSKCTGVTDIGITQIVSGCGNLKMIDLTCC 360
+D ++ IG K L +L LS C V+ G+ I GC L+ +++ C
Sbjct: 306 ---------HFTDKGMRAIGKGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEINGC 356
Query: 361 RYVXXXXXXXXXXXCPYLVCLKLESCDMVTENGLYRLGSNXXXXXXXXXXXXSGMNDTAL 420
+ CP L L L C + + L +G SG+ D A+
Sbjct: 357 HNIGTRGIEAIGKSCPRLKELALLYCQRIGNSALQEIGKGCKSLEILHLVDCSGIGDIAM 416
Query: 421 KYLSR-CSELVRLKLGLCTNISDIGLAHIAFNCPKMSELDLYRCVCIGDDGLAGLADRCK 479
+++ C L +L + C I + G+ I +C ++EL L C +G+ L + C
Sbjct: 417 CSIAKGCRNLKKLHIRRCYEIGNKGIISIGKHCKSLTELSLRFCDKVGNKALIAIGKGCS 476
Query: 480 KLIKLNVSYCKRITDRGMEYISH-LAELSDLEMRGLSSITSIGVKAVAIGCTRLADLDLK 538
L +LNVS C +I+D G+ I+ +L+ L++ L +I + + + GC L DL L
Sbjct: 477 -LQQLNVSGCNQISDAGITAIARGCPQLTHLDISVLQNIGDMPLAELGEGCPMLKDLVLS 535
Query: 539 QCEKVDDSGF 548
C + D+G
Sbjct: 536 HCHHITDNGL 545
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 130/317 (41%), Gaps = 59/317 (18%)
Query: 236 DVGLRFLGNGCPLLKTIDVSRCNCVSSSGAISVITGHHGLEQMAAGYCLFEFSAPLVDCL 295
D GL L NG P ++ + + C VSS G S+
Sbjct: 129 DTGLTALANGFPRIENLSLIWCPNVSSVGLCSLAQ------------------------- 163
Query: 296 ETLKCLSIIRID--GVRVSDFILQTIGTNCKSLVELGLSKCTGVTDIGITQIVSGCG-NL 352
KC S+ +D G V D L +G CK L EL L C G+TD+G+ +V GC +L
Sbjct: 164 ---KCTSLKSLDLQGCYVGDQGLAAVGKFCKQLEELNLRFCEGLTDVGVIDLVVGCSKSL 220
Query: 353 KMIDLTCCRYVXXXXXXXXXXXCPYLVCLKLESCDMVTENGLYRLGSNXXXXXXXXXXXX 412
K I + + C L L L+S + + + GL +
Sbjct: 221 KSIGVAASAKITDLSLEAVGSHCKLLEVLYLDS-EYIHDKGLIAVAQG------------ 267
Query: 413 SGMNDTALKYLSRCSELVRLKLGLCTNISDIGLAHIAFNCPKMSELDLYRCVCIGDDGLA 472
C L LKL C +++D+ A + C + L LY D G+
Sbjct: 268 -------------CHRLKNLKLQ-CVSVTDVAFAAVGELCTSLERLALYSFQHFTDKGMR 313
Query: 473 GLADRCKKLIKLNVSYCKRITDRGMEYISH-LAELSDLEMRGLSSITSIGVKAVAIGCTR 531
+ KKL L +S C ++ +G+E I+H EL +E+ G +I + G++A+ C R
Sbjct: 314 AIGKGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEINGCHNIGTRGIEAIGKSCPR 373
Query: 532 LADLDLKQCEKVDDSGF 548
L +L L C+++ +S
Sbjct: 374 LKELALLYCQRIGNSAL 390
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 121/308 (39%), Gaps = 54/308 (17%)
Query: 94 RGLRRLVLSRATGVGHVGLELLVRACPLLEAVDVSHCWGYGDREAAALSCAAR-LRELNM 152
+ L R+ ++ +G G+E + ++CP L+ + + +C G+ + + L L++
Sbjct: 346 KELERVEINGCHNIGTRGIEAIGKSCPRLKELALLYCQRIGNSALQEIGKGCKSLEILHL 405
Query: 153 DKCLGLTDIGLAQIAVGCSRLESLSLKWCLEISDLGIDXXXXXXXXXXXXDVSYL-KVTS 211
C G+ DI + IA GC L+ L ++ C EI + GI + + KV +
Sbjct: 406 VDCSGIGDIAMCSIAKGCRNLKKLHIRRCYEIGNKGIISIGKHCKSLTELSLRFCDKVGN 465
Query: 212 ESLRSIASLLKLERLIMVGCYLVDDVGLRFLGNGCPLLKTIDVSRCNCVSSSGAISVITG 271
++L +I L++L + GC + D G+ + GCP L +D ISV+
Sbjct: 466 KALIAIGKGCSLQQLNVSGCNQISDAGITAIARGCPQLTHLD------------ISVLQN 513
Query: 272 HHGLEQMAAGYCLFEFSAPLVDCLETLKCLSIIRIDGVRVSDFILQTIGTNCKSLVELGL 331
+ D L +G C L +L L
Sbjct: 514 ---------------------------------------IGDMPLAELGEGCPMLKDLVL 534
Query: 332 SKCTGVTDIGITQIVSGCGNLKMIDLTCCRYVXXXXXXXXXXXCPYLVCLKLESCDMVTE 391
S C +TD G+ +V C L+ + C + CP++ + +E VTE
Sbjct: 535 SHCHHITDNGLNHLVQKCKLLETCHMVYCPGITSAGVATVVSSCPHIKKVLIEKWK-VTE 593
Query: 392 NGLYRLGS 399
R GS
Sbjct: 594 RTTRRAGS 601
>AT1G77000.2 | Symbols: SKP2B | RNI-like superfamily protein |
chr1:28940888-28942401 FORWARD LENGTH=360
Length = 360
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 122/269 (45%), Gaps = 41/269 (15%)
Query: 250 KTIDVSRCNCVSSSGAISVITGHHGLEQMAAGYCLFEFS------APLVDCLETLKCLSI 303
+T+ ++ C C A+S+ GL +++ +C + AP L+TL +
Sbjct: 46 RTVIIASCICSGWRDAVSL-----GLTRLSLSWCKKNMNSLVLSLAPKFVKLQTL----V 96
Query: 304 IRIDGVRVSDFILQTIGTNCKSLVELGLSKCTGVTDIGITQIVSGCGNLKMIDLTCCRYV 363
+R D ++ D ++ I +C L +L LSK + +TD + + GC NL ++L+ C
Sbjct: 97 LRQDKPQLEDNAVEAIANHCHELQDLDLSKSSKITDHSLYSLARGCTNLTKLNLSGCTSF 156
Query: 364 XXXXXXXXXXXCPYLVCLKLESC-DMVTENGLYRLGSNXXXXXXXXXXXXSGMNDTALKY 422
C L L L C + V++N L +G N
Sbjct: 157 SDTALAHLTRFCRKLKILNLCGCVEAVSDNTLQAIGEN---------------------- 194
Query: 423 LSRCSELVRLKLGLCTNISDIGLAHIAFNCPKMSELDLYRCVCIGDDGLAGLADRCKKLI 482
C++L L LG C NISD G+ +A+ CP + LDL CV I D+ + LA+RC L
Sbjct: 195 ---CNQLQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCSCVLITDESVVALANRCIHLR 251
Query: 483 KLNVSYCKRITDRGMEYISHLAELSDLEM 511
L + YC+ ITDR M ++ + EM
Sbjct: 252 SLGLYYCRNITDRAMYSLAQSGVKNKHEM 280
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 27/149 (18%)
Query: 413 SGMNDTALKYLSR-CSELVRLKLGLCTNISDIGLAHIAFNCPKMSELDLYRCV-CIGDDG 470
S + D +L L+R C+ L +L L CT+ SD LAH+ C K+ L+L CV + D+
Sbjct: 128 SKITDHSLYSLARGCTNLTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCGCVEAVSDNT 187
Query: 471 LAGLADRCKKLIKLNVSYCKRITDRGMEYISHLAELSDLEMRGLSSITSIGVKAVAIGCT 530
L + + C +L LN+ +C+ I+D G V ++A GC
Sbjct: 188 LQAIGENCNQLQSLNLGWCENISDDG-------------------------VMSLAYGCP 222
Query: 531 RLADLDLKQCEKVDDSGFCALAFYSQNLR 559
L LDL C + D ALA +LR
Sbjct: 223 DLRTLDLCSCVLITDESVVALANRCIHLR 251
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 2/169 (1%)
Query: 234 VDDVGLRFLGNGCPLLKTIDVSRCNCVSSSGAISVITGHHGLEQMAAGYCLFEFSAPLVD 293
++D + + N C L+ +D+S+ + ++ S+ G L ++ C L
Sbjct: 104 LEDNAVEAIANHCHELQDLDLSKSSKITDHSLYSLARGCTNLTKLNLSGCTSFSDTALAH 163
Query: 294 CLETLKCLSIIRIDGV--RVSDFILQTIGTNCKSLVELGLSKCTGVTDIGITQIVSGCGN 351
+ L I+ + G VSD LQ IG NC L L L C ++D G+ + GC +
Sbjct: 164 LTRFCRKLKILNLCGCVEAVSDNTLQAIGENCNQLQSLNLGWCENISDDGVMSLAYGCPD 223
Query: 352 LKMIDLTCCRYVXXXXXXXXXXXCPYLVCLKLESCDMVTENGLYRLGSN 400
L+ +DL C + C +L L L C +T+ +Y L +
Sbjct: 224 LRTLDLCSCVLITDESVVALANRCIHLRSLGLYYCRNITDRAMYSLAQS 272
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 2/123 (1%)
Query: 439 NISDIGLAHIAFNCPKMSELDLYRCVCIGDDGLAGLADRCKKLIKLNVSYCKRITDRGME 498
+ D + IA +C ++ +LDL + I D L LA C L KLN+S C +D +
Sbjct: 103 QLEDNAVEAIANHCHELQDLDLSKSSKITDHSLYSLARGCTNLTKLNLSGCTSFSDTALA 162
Query: 499 YISHL-AELSDLEMRG-LSSITSIGVKAVAIGCTRLADLDLKQCEKVDDSGFCALAFYSQ 556
+++ +L L + G + +++ ++A+ C +L L+L CE + D G +LA+
Sbjct: 163 HLTRFCRKLKILNLCGCVEAVSDNTLQAIGENCNQLQSLNLGWCENISDDGVMSLAYGCP 222
Query: 557 NLR 559
+LR
Sbjct: 223 DLR 225
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 119/266 (44%), Gaps = 17/266 (6%)
Query: 23 GSDRKPWRLVCKEFLRVESLTRNSVRILRIEFLLGLLQKCCNIETLDLS-WCPRIDDGTV 81
G+ RK L C E +++E + + + + +E L+ +L + + S C D V
Sbjct: 5 GATRKELNL-CFENMKMEGVLISEWKDIPVELLMKILNLVDDRTVIIASCICSGWRDA-V 62
Query: 82 SVLLSQGSLSW-TRGLRRLVLSRATGVGHVGLELLVRACPLLEAVDVSHCWGYGDREAAA 140
S+ L++ SLSW + + LVLS A + +L + P LE V EA A
Sbjct: 63 SLGLTRLSLSWCKKNMNSLVLSLAPKFVKLQTLVLRQDKPQLEDNAV---------EAIA 113
Query: 141 LSCAARLRELNMDKCLGLTDIGLAQIAVGCSRLESLSLKWCLEISDLGIDXXXXXXXXXX 200
C L++L++ K +TD L +A GC+ L L+L C SD +
Sbjct: 114 NHCH-ELQDLDLSKSSKITDHSLYSLARGCTNLTKLNLSGCTSFSDTALAHLTRFCRKLK 172
Query: 201 XXDVS--YLKVTSESLRSIA-SLLKLERLIMVGCYLVDDVGLRFLGNGCPLLKTIDVSRC 257
++ V+ +L++I + +L+ L + C + D G+ L GCP L+T+D+ C
Sbjct: 173 ILNLCGCVEAVSDNTLQAIGENCNQLQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCSC 232
Query: 258 NCVSSSGAISVITGHHGLEQMAAGYC 283
++ +++ L + YC
Sbjct: 233 VLITDESVVALANRCIHLRSLGLYYC 258
>AT1G77000.1 | Symbols: ATSKP2;2, SKP2B | RNI-like superfamily
protein | chr1:28940888-28942401 FORWARD LENGTH=360
Length = 360
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 122/269 (45%), Gaps = 41/269 (15%)
Query: 250 KTIDVSRCNCVSSSGAISVITGHHGLEQMAAGYCLFEFS------APLVDCLETLKCLSI 303
+T+ ++ C C A+S+ GL +++ +C + AP L+TL +
Sbjct: 46 RTVIIASCICSGWRDAVSL-----GLTRLSLSWCKKNMNSLVLSLAPKFVKLQTL----V 96
Query: 304 IRIDGVRVSDFILQTIGTNCKSLVELGLSKCTGVTDIGITQIVSGCGNLKMIDLTCCRYV 363
+R D ++ D ++ I +C L +L LSK + +TD + + GC NL ++L+ C
Sbjct: 97 LRQDKPQLEDNAVEAIANHCHELQDLDLSKSSKITDHSLYSLARGCTNLTKLNLSGCTSF 156
Query: 364 XXXXXXXXXXXCPYLVCLKLESC-DMVTENGLYRLGSNXXXXXXXXXXXXSGMNDTALKY 422
C L L L C + V++N L +G N
Sbjct: 157 SDTALAHLTRFCRKLKILNLCGCVEAVSDNTLQAIGEN---------------------- 194
Query: 423 LSRCSELVRLKLGLCTNISDIGLAHIAFNCPKMSELDLYRCVCIGDDGLAGLADRCKKLI 482
C++L L LG C NISD G+ +A+ CP + LDL CV I D+ + LA+RC L
Sbjct: 195 ---CNQLQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCSCVLITDESVVALANRCIHLR 251
Query: 483 KLNVSYCKRITDRGMEYISHLAELSDLEM 511
L + YC+ ITDR M ++ + EM
Sbjct: 252 SLGLYYCRNITDRAMYSLAQSGVKNKHEM 280
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 27/149 (18%)
Query: 413 SGMNDTALKYLSR-CSELVRLKLGLCTNISDIGLAHIAFNCPKMSELDLYRCV-CIGDDG 470
S + D +L L+R C+ L +L L CT+ SD LAH+ C K+ L+L CV + D+
Sbjct: 128 SKITDHSLYSLARGCTNLTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCGCVEAVSDNT 187
Query: 471 LAGLADRCKKLIKLNVSYCKRITDRGMEYISHLAELSDLEMRGLSSITSIGVKAVAIGCT 530
L + + C +L LN+ +C+ I+D G V ++A GC
Sbjct: 188 LQAIGENCNQLQSLNLGWCENISDDG-------------------------VMSLAYGCP 222
Query: 531 RLADLDLKQCEKVDDSGFCALAFYSQNLR 559
L LDL C + D ALA +LR
Sbjct: 223 DLRTLDLCSCVLITDESVVALANRCIHLR 251
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 2/169 (1%)
Query: 234 VDDVGLRFLGNGCPLLKTIDVSRCNCVSSSGAISVITGHHGLEQMAAGYCLFEFSAPLVD 293
++D + + N C L+ +D+S+ + ++ S+ G L ++ C L
Sbjct: 104 LEDNAVEAIANHCHELQDLDLSKSSKITDHSLYSLARGCTNLTKLNLSGCTSFSDTALAH 163
Query: 294 CLETLKCLSIIRIDGV--RVSDFILQTIGTNCKSLVELGLSKCTGVTDIGITQIVSGCGN 351
+ L I+ + G VSD LQ IG NC L L L C ++D G+ + GC +
Sbjct: 164 LTRFCRKLKILNLCGCVEAVSDNTLQAIGENCNQLQSLNLGWCENISDDGVMSLAYGCPD 223
Query: 352 LKMIDLTCCRYVXXXXXXXXXXXCPYLVCLKLESCDMVTENGLYRLGSN 400
L+ +DL C + C +L L L C +T+ +Y L +
Sbjct: 224 LRTLDLCSCVLITDESVVALANRCIHLRSLGLYYCRNITDRAMYSLAQS 272
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 2/123 (1%)
Query: 439 NISDIGLAHIAFNCPKMSELDLYRCVCIGDDGLAGLADRCKKLIKLNVSYCKRITDRGME 498
+ D + IA +C ++ +LDL + I D L LA C L KLN+S C +D +
Sbjct: 103 QLEDNAVEAIANHCHELQDLDLSKSSKITDHSLYSLARGCTNLTKLNLSGCTSFSDTALA 162
Query: 499 YISHL-AELSDLEMRG-LSSITSIGVKAVAIGCTRLADLDLKQCEKVDDSGFCALAFYSQ 556
+++ +L L + G + +++ ++A+ C +L L+L CE + D G +LA+
Sbjct: 163 HLTRFCRKLKILNLCGCVEAVSDNTLQAIGENCNQLQSLNLGWCENISDDGVMSLAYGCP 222
Query: 557 NLR 559
+LR
Sbjct: 223 DLR 225
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 119/266 (44%), Gaps = 17/266 (6%)
Query: 23 GSDRKPWRLVCKEFLRVESLTRNSVRILRIEFLLGLLQKCCNIETLDLS-WCPRIDDGTV 81
G+ RK L C E +++E + + + + +E L+ +L + + S C D V
Sbjct: 5 GATRKELNL-CFENMKMEGVLISEWKDIPVELLMKILNLVDDRTVIIASCICSGWRDA-V 62
Query: 82 SVLLSQGSLSW-TRGLRRLVLSRATGVGHVGLELLVRACPLLEAVDVSHCWGYGDREAAA 140
S+ L++ SLSW + + LVLS A + +L + P LE V EA A
Sbjct: 63 SLGLTRLSLSWCKKNMNSLVLSLAPKFVKLQTLVLRQDKPQLEDNAV---------EAIA 113
Query: 141 LSCAARLRELNMDKCLGLTDIGLAQIAVGCSRLESLSLKWCLEISDLGIDXXXXXXXXXX 200
C L++L++ K +TD L +A GC+ L L+L C SD +
Sbjct: 114 NHCH-ELQDLDLSKSSKITDHSLYSLARGCTNLTKLNLSGCTSFSDTALAHLTRFCRKLK 172
Query: 201 XXDVS--YLKVTSESLRSIA-SLLKLERLIMVGCYLVDDVGLRFLGNGCPLLKTIDVSRC 257
++ V+ +L++I + +L+ L + C + D G+ L GCP L+T+D+ C
Sbjct: 173 ILNLCGCVEAVSDNTLQAIGENCNQLQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCSC 232
Query: 258 NCVSSSGAISVITGHHGLEQMAAGYC 283
++ +++ L + YC
Sbjct: 233 VLITDESVVALANRCIHLRSLGLYYC 258
>AT2G25490.1 | Symbols: EBF1, FBL6 | EIN3-binding F box protein 1 |
chr2:10848018-10850275 REVERSE LENGTH=628
Length = 628
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 128/471 (27%), Positives = 193/471 (40%), Gaps = 68/471 (14%)
Query: 95 GLRRLVL--SRATGVGHVGLELLVRACPLLEAV---DVSHCWGYGDREAAALSCAARLRE 149
GL +L + S + V +GL + R+CP L ++ +VS G E A CA +L +
Sbjct: 150 GLGKLSIRGSNSAKVSDLGLRSIGRSCPSLGSLSLWNVSTITDNGLLEIAE-GCA-QLEK 207
Query: 150 LNMDKCLGLTDIGLAQIAVGCSRLESLSLKWCLEISDLGIDXXXXXXXXXXXXDVSYLKV 209
L +++C +TD GL IA C L L+L+ C I D
Sbjct: 208 LELNRCSTITDKGLVAIAKSCPNLTELTLEACSRIGD----------------------- 244
Query: 210 TSESLRSIA-SLLKLERLIMVGCYLVDDVGL-RFLGNGCPLLKTIDVSRCNCVSSSGAIS 267
E L +IA S KL+ + + C LV D G+ L N L + + N S A+
Sbjct: 245 --EGLLAIARSCSKLKSVSIKNCPLVRDQGIASLLSNTTCSLAKLKLQMLNVTDVSLAV- 301
Query: 268 VITGHHGLEQMAAGYCLFEFSAPLVDCLETLKCLSIIRIDGVRVSDFILQTIGTNCKSLV 327
GH+GL ++ L + + V F + G + L
Sbjct: 302 --VGHYGL---------------------SITDLVLAGLSHVSEKGFWVMGNGVGLQKLN 338
Query: 328 ELGLSKCTGVTDIGITQIVSGCGNLKMIDLTCCRYVXXXXXXXXXXXCPYLVCLKLESCD 387
L ++ C GVTD+G+ + GC N+K ++ + L L+LE C
Sbjct: 339 SLTITACQGVTDMGLESVGKGCPNMKKAIISKSPLLSDNGLVSFAKASLSLESLQLEECH 398
Query: 388 MVTENGLY----RLGSNXXXXXXXXXXXXSGMNDTALKYLSRCSELVRLKLGLCTNISDI 443
VT+ G + G + T L S CS L L + C D
Sbjct: 399 RVTQFGFFGSLLNCGEKLKAFSLVNCLSIRDLT-TGLPASSHCSALRSLSIRNCPGFGDA 457
Query: 444 GLAHIAFNCPKMSELDLYRCVCIGDDGLAGLADRCKKLIKLNVSYCKRITDRGMEYISHL 503
LA I CP++ ++DL I + G L L+K+N S C +TDR + I+
Sbjct: 458 NLAAIGKLCPQLEDIDLCGLKGITESGFLHLIQ--SSLVKINFSGCSNLTDRVISAITAR 515
Query: 504 A--ELSDLEMRGLSSITSIGVKAVAIGCTRLADLDLKQCEKVDDSGFCALA 552
L L + G S+IT + ++A C L+DLD+ +C + DSG ALA
Sbjct: 516 NGWTLEVLNIDGCSNITDASLVSIAANCQILSDLDISKC-AISDSGIQALA 565
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 125/488 (25%), Positives = 190/488 (38%), Gaps = 91/488 (18%)
Query: 96 LRRLVLSRATGVGHVGLELLVRACPLLEAVDVSHCWGYGDRE--AAALSCAARLRELNMD 153
L L L + + GL + C LE ++++ C D+ A A SC L EL ++
Sbjct: 179 LGSLSLWNVSTITDNGLLEIAEGCAQLEKLELNRCSTITDKGLVAIAKSCP-NLTELTLE 237
Query: 154 KCLGLTDIGLAQIAVGCSRLESLSLKWCLEISDLGIDXXXXXXX-XXXXXDVSYLKVTSE 212
C + D GL IA CS+L+S+S+K C + D GI + L VT
Sbjct: 238 ACSRIGDEGLLAIARSCSKLKSVSIKNCPLVRDQGIASLLSNTTCSLAKLKLQMLNVTDV 297
Query: 213 SLRSIA-----------------------------SLLKLERLIMVGCYLVDDVGLRFLG 243
SL + L KL L + C V D+GL +G
Sbjct: 298 SLAVVGHYGLSITDLVLAGLSHVSEKGFWVMGNGVGLQKLNSLTITACQGVTDMGLESVG 357
Query: 244 NGCPLLKTIDVSRCNCVSSSGAISVITGHHGLEQMAAGYC----LFEFSAPLVDCLETLK 299
GCP +K +S+ +S +G +S LE + C F F L++C E LK
Sbjct: 358 KGCPNMKKAIISKSPLLSDNGLVSFAKASLSLESLQLEECHRVTQFGFFGSLLNCGEKLK 417
Query: 300 CLSIIRIDGVRVSDFILQTIGTNCKSLVELGLSKCTGVTDIGITQIVSGCGNLKMIDLTC 359
S++ +R L ++C +L L + C G D + I C L+ IDL
Sbjct: 418 AFSLVNCLSIRDLTTGLPA-SSHCSALRSLSIRNCPGFGDANLAAIGKLCPQLEDIDL-- 474
Query: 360 CRYVXXXXXXXXXXXCPYLVCLKLESCDMVTENGLYRLGSNXXXXXXXXXXXXSGMNDTA 419
C LV + C +T+ + + + N
Sbjct: 475 CGLKGITESGFLHLIQSSLVKINFSGCSNLTDRVISAI---------------TARNGWT 519
Query: 420 LKYLSRCSELVRLKLGLCTNISDIGLAHIAFNCPKMSELDLYRCVCIGDDGLAGLADRCK 479
L+ L+ + C+NI+D L IA NC +S+LD+ +C I D G+ LA K
Sbjct: 520 LEVLN---------IDGCSNITDASLVSIAANCQILSDLDISKCA-ISDSGIQALASSDK 569
Query: 480 -KLIKLNVSYCKRITDRGMEYISHLAELSDLEMRGLSSITSIGVKAVAIGCTRLADLDLK 538
KL L+V+ C +TD+ + I V +G T L L+L+
Sbjct: 570 LKLQILSVAGCSMVTDKSLPAI------------------------VGLGSTLLG-LNLQ 604
Query: 539 QCEKVDDS 546
QC + +S
Sbjct: 605 QCRSISNS 612
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 90/215 (41%), Gaps = 54/215 (25%)
Query: 375 CPYLVCLKLESCDMVTENGLYRLGSNXXXXXXXXXXXXSGMNDTALKYLSRCSELVRLKL 434
CP L L L + +T+NGL + C++L +L+L
Sbjct: 176 CPSLGSLSLWNVSTITDNGLLEIAEG-------------------------CAQLEKLEL 210
Query: 435 GLCTNISDIGLAHIAFNCPKMSELDLYRCVCIGDDGLAGLADRCKKLIKLNVSYCKRITD 494
C+ I+D GL IA +CP ++EL L C IGD+GL +A C KL +++ C + D
Sbjct: 211 NRCSTITDKGLVAIAKSCPNLTELTLEACSRIGDEGLLAIARSCSKLKSVSIKNCPLVRD 270
Query: 495 RG--------------------------MEYISHLA-ELSDLEMRGLSSITSIG--VKAV 525
+G + + H ++DL + GLS ++ G V
Sbjct: 271 QGIASLLSNTTCSLAKLKLQMLNVTDVSLAVVGHYGLSITDLVLAGLSHVSEKGFWVMGN 330
Query: 526 AIGCTRLADLDLKQCEKVDDSGFCALAFYSQNLRQ 560
+G +L L + C+ V D G ++ N+++
Sbjct: 331 GVGLQKLNSLTITACQGVTDMGLESVGKGCPNMKK 365
>AT1G21410.1 | Symbols: SKP2A | F-box/RNI-like superfamily protein |
chr1:7497479-7499386 FORWARD LENGTH=360
Length = 360
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 89/195 (45%), Gaps = 26/195 (13%)
Query: 304 IRIDGVRVSDFILQTIGTNCKSLVELGLSKCTGVTDIGITQIVSGCGNLKMIDLTCCRYV 363
+R D ++ D ++ I +C L EL LSK +TD + + GC +L ++L+ C
Sbjct: 97 LRQDKPQLEDNAVEAIANHCHELQELDLSKSLKITDRSLYALAHGCPDLTKLNLSGCTSF 156
Query: 364 XXXXXXXXXXXCPYLVCLKLESC-DMVTENGLYRLGSNXXXXXXXXXXXXSGMNDTALKY 422
C L L L C VT+N L +G+N
Sbjct: 157 SDTAIAYLTRFCRKLKVLNLCGCVKAVTDNALEAIGNN---------------------- 194
Query: 423 LSRCSELVRLKLGLCTNISDIGLAHIAFNCPKMSELDLYRCVCIGDDGLAGLADRCKKLI 482
C+++ L LG C NISD G+ +A+ CP + LDL CV I D+ + LAD C L
Sbjct: 195 ---CNQMQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCGCVLITDESVVALADWCVHLR 251
Query: 483 KLNVSYCKRITDRGM 497
L + YC+ ITDR M
Sbjct: 252 SLGLYYCRNITDRAM 266
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 76/148 (51%), Gaps = 3/148 (2%)
Query: 415 MNDTALKYLS-RCSELVRLKLGLCTNISDIGLAHIAFNCPKMSELDLYRCVCIGDDGLAG 473
+ D A++ ++ C EL L L I+D L +A CP +++L+L C D +A
Sbjct: 104 LEDNAVEAIANHCHELQELDLSKSLKITDRSLYALAHGCPDLTKLNLSGCTSFSDTAIAY 163
Query: 474 LADRCKKLIKLNVSYC-KRITDRGMEYI-SHLAELSDLEMRGLSSITSIGVKAVAIGCTR 531
L C+KL LN+ C K +TD +E I ++ ++ L + +I+ GV ++A GC
Sbjct: 164 LTRFCRKLKVLNLCGCVKAVTDNALEAIGNNCNQMQSLNLGWCENISDDGVMSLAYGCPD 223
Query: 532 LADLDLKQCEKVDDSGFCALAFYSQNLR 559
L LDL C + D ALA + +LR
Sbjct: 224 LRTLDLCGCVLITDESVVALADWCVHLR 251
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 75/150 (50%), Gaps = 3/150 (2%)
Query: 413 SGMNDTALKYLSRCSELVRLKLGL-CTNISDIGLAHIAFNCPKMSELDLYRCVCIGDDGL 471
+ MN L + + +L L L + D + IA +C ++ ELDL + + I D L
Sbjct: 76 NNMNSLVLSLVPKFVKLQTLNLRQDKPQLEDNAVEAIANHCHELQELDLSKSLKITDRSL 135
Query: 472 AGLADRCKKLIKLNVSYCKRITDRGMEYISHL-AELSDLEMRG-LSSITSIGVKAVAIGC 529
LA C L KLN+S C +D + Y++ +L L + G + ++T ++A+ C
Sbjct: 136 YALAHGCPDLTKLNLSGCTSFSDTAIAYLTRFCRKLKVLNLCGCVKAVTDNALEAIGNNC 195
Query: 530 TRLADLDLKQCEKVDDSGFCALAFYSQNLR 559
++ L+L CE + D G +LA+ +LR
Sbjct: 196 NQMQSLNLGWCENISDDGVMSLAYGCPDLR 225
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 24/179 (13%)
Query: 222 KLERLIMVGCYLVDDVGLRFLGNGCPLLKTIDVSRCNCVSSSGAISVITGHHGLEQMAAG 281
+L+ L + + D L L +GCP L +++S C S + AI+ +T
Sbjct: 118 ELQELDLSKSLKITDRSLYALAHGCPDLTKLNLSGCTSFSDT-AIAYLTR---------- 166
Query: 282 YCLFEFSAPLVDCLETLKCLSIIRIDGVRVSDFILQTIGTNCKSLVELGLSKCTGVTDIG 341
+C L C++ V+D L+ IG NC + L L C ++D G
Sbjct: 167 FCRKLKVLNLCGCVKA-------------VTDNALEAIGNNCNQMQSLNLGWCENISDDG 213
Query: 342 ITQIVSGCGNLKMIDLTCCRYVXXXXXXXXXXXCPYLVCLKLESCDMVTENGLYRLGSN 400
+ + GC +L+ +DL C + C +L L L C +T+ +Y L +
Sbjct: 214 VMSLAYGCPDLRTLDLCGCVLITDESVVALADWCVHLRSLGLYYCRNITDRAMYSLAQS 272
>AT5G25350.1 | Symbols: EBF2 | EIN3-binding F box protein 2 |
chr5:8794842-8796882 REVERSE LENGTH=623
Length = 623
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 112/448 (25%), Positives = 177/448 (39%), Gaps = 65/448 (14%)
Query: 96 LRRLVLSRATGVGHVGLELLVRACPLLEAVDVSHCWGYGDREAAALS-CAARLRELNMDK 154
LR + L V +GL + R+CP++E +D+S C G D A++ L +L +D
Sbjct: 169 LRIVSLWNLPAVSDLGLSEIARSCPMIEKLDLSRCPGITDSGLVAIAENCVNLSDLTIDS 228
Query: 155 CLGLTDIGLAQIAVGCSRLESLSLKWCLEISDLGIDX-XXXXXXXXXXXDVSYLKVTSES 213
C G+ + GL IA C L S+S++ C I D G+ + L V+ S
Sbjct: 229 CSGVGNEGLRAIARRCVNLRSISIRSCPRIGDQGVAFLLAQAGSYLTKVKLQMLNVSGLS 288
Query: 214 LRSIA-----------------------------SLLKLERLIMVGCYLVDDVGLRFLGN 244
L I L KL+ L ++ C + DVGL +GN
Sbjct: 289 LAVIGHYGAAVTDLVLHGLQGVNEKGFWVMGNAKGLKKLKSLSVMSCRGMTDVGLEAVGN 348
Query: 245 GCPLLKTIDVSRCNCVSSSGAISVITGHHGLEQMAAGYCLFEFSAPLVDCLETLKCLSII 304
GCP LK + +++C VS G +++ LE + C
Sbjct: 349 GCPDLKHVSLNKCLLVSGKGLVALAKSALSLESLKLEECH-------------------- 388
Query: 305 RIDGVRVSDFILQTIGTNCKS-LVELGLSKCTGVTDIG--ITQIVSGCGNLKMIDLTCCR 361
R++ F L NC S L L+ C G++D + C +L+ + + CC
Sbjct: 389 -----RINQFGLMGFLMNCGSKLKAFSLANCLGISDFNSESSLPSPSCSSLRSLSIRCCP 443
Query: 362 YVXXXXXXXXXXXCPYLVCLKLESCDMVTENGLYR-LGSNXXXXXXXXXXXXSGMNDTAL 420
C L ++L + VT+ G+ L SN ++D +
Sbjct: 444 GFGDASLAFLGKFCHQLQDVELCGLNGVTDAGVRELLQSNNVGLVKVNLSECINVSDNTV 503
Query: 421 KYLSRCS--ELVRLKLGLCTNISDIGLAHIAFNCPKMSELDLYRCVCIGDDGLAGLADRC 478
+S C L L L C NI++ L +A NC +++LD+ + + D G+ LA
Sbjct: 504 SAISVCHGRTLESLNLDGCKNITNASLVAVAKNCYSVNDLDISNTL-VSDHGIKALASSP 562
Query: 479 K--KLIKLNVSYCKRITDRGMEYISHLA 504
L L++ C ITD+ I L
Sbjct: 563 NHLNLQVLSIGGCSSITDKSKACIQKLG 590
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 111/424 (26%), Positives = 175/424 (41%), Gaps = 33/424 (7%)
Query: 158 LTDIGLAQIAVGCSRLESLSLKWCLEISDLGIDXXXXXXXXXXXXDVSYLK-VTSESLRS 216
+TD+GL +A GC L +SL +SDLG+ D+S +T L +
Sbjct: 154 VTDVGLGAVAHGCPSLRIVSLWNLPAVSDLGLSEIARSCPMIEKLDLSRCPGITDSGLVA 213
Query: 217 IA-SLLKLERLIMVGCYLVDDVGLRFLGNGCPLLKTIDVSRCNCVSSSGAISVITGHHGL 275
IA + + L L + C V + GLR + C L++I + C + G ++
Sbjct: 214 IAENCVNLSDLTIDSCSGVGNEGLRAIARRCVNLRSISIRSCPRIGDQGVAFLLA----- 268
Query: 276 EQMAAGYCLFEFSAPLVDCLETLKCLSIIRIDGVRVSDFILQTI-GTNCKSLVELGLSK- 333
AG L + +++ + L++I G V+D +L + G N K +G +K
Sbjct: 269 ---QAGSYLTKVKLQMLNV--SGLSLAVIGHYGAAVTDLVLHGLQGVNEKGFWVMGNAKG 323
Query: 334 -----------CTGVTDIGITQIVSGCGNLKMIDLTCCRYVXXXXXXXXXXXCPYLVCLK 382
C G+TD+G+ + +GC +LK + L C V L LK
Sbjct: 324 LKKLKSLSVMSCRGMTDVGLEAVGNGCPDLKHVSLNKCLLVSGKGLVALAKSALSLESLK 383
Query: 383 LESCDMVTENGLYRL----GSNXXXXXXXXXXXXSGMNDTALKYLSRCSELVRLKLGLCT 438
LE C + + GL GS S N + CS L L + C
Sbjct: 384 LEECHRINQFGLMGFLMNCGSKLKAFSLANCLGISDFNSESSLPSPSCSSLRSLSIRCCP 443
Query: 439 NISDIGLAHIAFNCPKMSELDLYRCVCIGDDGLAGLADRCK-KLIKLNVSYCKRITDRGM 497
D LA + C ++ +++L + D G+ L L+K+N+S C ++D +
Sbjct: 444 GFGDASLAFLGKFCHQLQDVELCGLNGVTDAGVRELLQSNNVGLVKVNLSECINVSDNTV 503
Query: 498 EYIS--HLAELSDLEMRGLSSITSIGVKAVAIGCTRLADLDLKQCEKVDDSGFCALAFYS 555
IS H L L + G +IT+ + AVA C + DLD+ V D G ALA
Sbjct: 504 SAISVCHGRTLESLNLDGCKNITNASLVAVAKNCYSVNDLDISN-TLVSDHGIKALASSP 562
Query: 556 QNLR 559
+L
Sbjct: 563 NHLN 566
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 64/118 (54%), Gaps = 1/118 (0%)
Query: 435 GLCTNISDIGLAHIAFNCPKMSELDLYRCVCIGDDGLAGLADRCKKLIKLNVSYCKRITD 494
G + ++D+GL +A CP + + L+ + D GL+ +A C + KL++S C ITD
Sbjct: 149 GFESKVTDVGLGAVAHGCPSLRIVSLWNLPAVSDLGLSEIARSCPMIEKLDLSRCPGITD 208
Query: 495 RGMEYIS-HLAELSDLEMRGLSSITSIGVKAVAIGCTRLADLDLKQCEKVDDSGFCAL 551
G+ I+ + LSDL + S + + G++A+A C L + ++ C ++ D G L
Sbjct: 209 SGLVAIAENCVNLSDLTIDSCSGVGNEGLRAIARRCVNLRSISIRSCPRIGDQGVAFL 266
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 102/232 (43%), Gaps = 37/232 (15%)
Query: 32 VCKEFLRVESLTRNSVRILRIEFLLGLLQKCCNIETLDLSWCPRIDDGTVSVLLSQGSLS 91
+ + + + LT +S + E L + ++C N+ ++ + CPRI D V+ LL+Q
Sbjct: 214 IAENCVNLSDLTIDSCSGVGNEGLRAIARRCVNLRSISIRSCPRIGDQGVAFLLAQAGSY 273
Query: 92 WTRGLRRLVLSRATG-----VGHVGLELLVRACPLLEAVDVSHCWGYGDREAAALSCAAR 146
T+ +L + +G +GH G + L+ V+ W G+ + +
Sbjct: 274 LTK--VKLQMLNVSGLSLAVIGHYGAAVTDLVLHGLQGVNEKGFWVMGNAKG-----LKK 326
Query: 147 LRELNMDKCLGLTDIGLAQIAVGCSRLESLSLKWCLEISDLGIDXXXXXXXXXXXXDVSY 206
L+ L++ C G+TD+GL + GC L+ +SL CL +S G+ V+
Sbjct: 327 LKSLSVMSCRGMTDVGLEAVGNGCPDLKHVSLNKCLLVSGKGL--------------VAL 372
Query: 207 LKVTSESLRSIASLLKLERLIMVGCYLVDDVGLR-FLGNGCPLLKTIDVSRC 257
K S L LE L + C+ ++ GL FL N LK ++ C
Sbjct: 373 AK----------SALSLESLKLEECHRINQFGLMGFLMNCGSKLKAFSLANC 414
>AT5G23340.1 | Symbols: | RNI-like superfamily protein |
chr5:7856314-7857983 FORWARD LENGTH=405
Length = 405
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 138/343 (40%), Gaps = 55/343 (16%)
Query: 206 YLKVTSESLRSIASLLKLERLI-MVGCYLVDDVGLRFLGNGCPLLKTIDVSRCNCVSSSG 264
Y VT L I+ K R++ + C + D GL +G LL+ +DVS C +S G
Sbjct: 82 YPGVTDSDLAVISEGFKFLRVLNLHNCKGITDTGLASIGRCLSLLQFLDVSYCRKLSDKG 141
Query: 265 AISVITGHHGLEQMAAGYCLFEFSAPLVDCLETLKCLSIIRIDGVRVSDFILQTIGTNCK 324
+V G H L + C F ++D L+++ C+
Sbjct: 142 LSAVAEGCHDLRALHLAGCRF-------------------------ITDESLKSLSERCR 176
Query: 325 SLVELGLSKCTGVTDIGITQIVSGCGNLKMIDLTCCRYVXXXXXXXXXXXCPY-LVCLKL 383
L LGL CT +TD G+ +V GC +K +D+ C V C L LKL
Sbjct: 177 DLEALGLQGCTNITDSGLADLVKGCRKIKSLDINKCSNVGDAGVSSVAKACASSLKTLKL 236
Query: 384 ESCDMVTENGLYRLGSNXXXXXXXXXXXXSGMNDTALKYLSRCSELVRLKLGLCTNISDI 443
C Y++G N++ C L L +G C +ISD
Sbjct: 237 LDC--------YKVG-----------------NESISSLAQFCKNLETLIIGGCRDISDE 271
Query: 444 GLAHIAFNCP-KMSELDLYRCVCIGDDGLAGLADRCKKLIKLNVSYCKRITDRGMEYI-- 500
+ +A +C + L + C+ I D L+ + +CK L L++ C+ +TD +
Sbjct: 272 SIMLLADSCKDSLKNLRMDWCLNISDSSLSCILKQCKNLEALDIGCCEEVTDTAFRDLGS 331
Query: 501 SHLAELSDLEMRGLSSITSIGVKAVAIGCTRLADLDLKQCEKV 543
+ L L++ + IT G+ + C+ L +D++ V
Sbjct: 332 DDVLGLKVLKVSNCTKITVTGIGKLLDKCSSLEYIDVRSLPHV 374
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 135/284 (47%), Gaps = 7/284 (2%)
Query: 121 LLEAVDVSHCWGYGDREAAALSCAAR-LRELNMDKCLGLTDIGLAQIAVGCSRLESLSLK 179
L +++ S G D + A +S + LR LN+ C G+TD GLA I S L+ L +
Sbjct: 73 LSQSISRSFYPGVTDSDLAVISEGFKFLRVLNLHNCKGITDTGLASIGRCLSLLQFLDVS 132
Query: 180 WCLEISDLGIDXXXXXXXXXXXXDVSYLK-VTSESLRSIASLLK-LERLIMVGCYLVDDV 237
+C ++SD G+ ++ + +T ESL+S++ + LE L + GC + D
Sbjct: 133 YCRKLSDKGLSAVAEGCHDLRALHLAGCRFITDESLKSLSERCRDLEALGLQGCTNITDS 192
Query: 238 GLRFLGNGCPLLKTIDVSRCNCVSSSGAISVITG-HHGLEQMAAGYCLFEFSAPLVDCLE 296
GL L GC +K++D+++C+ V +G SV L+ + C + + +
Sbjct: 193 GLADLVKGCRKIKSLDINKCSNVGDAGVSSVAKACASSLKTLKLLDCYKVGNESISSLAQ 252
Query: 297 TLKCLSIIRIDGVR-VSDFILQTIGTNCK-SLVELGLSKCTGVTDIGITQIVSGCGNLKM 354
K L + I G R +SD + + +CK SL L + C ++D ++ I+ C NL+
Sbjct: 253 FCKNLETLIIGGCRDISDESIMLLADSCKDSLKNLRMDWCLNISDSSLSCILKQCKNLEA 312
Query: 355 IDLTCCRYVXXXXXXXX-XXXCPYLVCLKLESCDMVTENGLYRL 397
+D+ CC V L LK+ +C +T G+ +L
Sbjct: 313 LDIGCCEEVTDTAFRDLGSDDVLGLKVLKVSNCTKITVTGIGKL 356
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 118/283 (41%), Gaps = 4/283 (1%)
Query: 270 TGHHGLEQMAAGYCLFEFSAPLVDCLETLKCLSIIRIDGVRVSDFILQTIGTNCKSLVEL 329
T L A + L ++ +E SI R V+D L I K L L
Sbjct: 44 TDRKKLAARAGPHMLRRLASRFTQIVELDLSQSISRSFYPGVTDSDLAVISEGFKFLRVL 103
Query: 330 GLSKCTGVTDIGITQIVSGCGNLKMIDLTCCRYVXXXXXXXXXXXCPYLVCLKLESCDMV 389
L C G+TD G+ I L+ +D++ CR + C L L L C +
Sbjct: 104 NLHNCKGITDTGLASIGRCLSLLQFLDVSYCRKLSDKGLSAVAEGCHDLRALHLAGCRFI 163
Query: 390 TENGLYRLGSNXXXXXXXXXXXXSGMNDTALKYLSR-CSELVRLKLGLCTNISDIGLAHI 448
T+ L L + + D+ L L + C ++ L + C+N+ D G++ +
Sbjct: 164 TDESLKSLSERCRDLEALGLQGCTNITDSGLADLVKGCRKIKSLDINKCSNVGDAGVSSV 223
Query: 449 AFNCPK-MSELDLYRCVCIGDDGLAGLADRCKKLIKLNVSYCKRITDRGMEYISHLAE-- 505
A C + L L C +G++ ++ LA CK L L + C+ I+D + ++ +
Sbjct: 224 AKACASSLKTLKLLDCYKVGNESISSLAQFCKNLETLIIGGCRDISDESIMLLADSCKDS 283
Query: 506 LSDLEMRGLSSITSIGVKAVAIGCTRLADLDLKQCEKVDDSGF 548
L +L M +I+ + + C L LD+ CE+V D+ F
Sbjct: 284 LKNLRMDWCLNISDSSLSCILKQCKNLEALDIGCCEEVTDTAF 326
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 172/372 (46%), Gaps = 25/372 (6%)
Query: 10 LTEDLLIRILDKLGSDRKP--WRLVCKEFLRVESLTRNSVRILRIEFLLG-LLQKCCNIE 66
LT+D L +L +L SD+ + LVCK +L ++S R + +L L + I
Sbjct: 10 LTDDELRWVLSRLDSDKDKEVFGLVCKRWLNLQSTDRKKLAARAGPHMLRRLASRFTQIV 69
Query: 67 TLDLS------WCPRIDDGTVSVLLSQGSLSWTRGLRRLVLSRATGVGHVGLELLVRACP 120
LDLS + P + D ++V+ S+G + LR L L G+ GL + R
Sbjct: 70 ELDLSQSISRSFYPGVTDSDLAVI-SEG----FKFLRVLNLHNCKGITDTGLASIGRCLS 124
Query: 121 LLEAVDVSHCWGYGDREAAALSCAAR-LRELNMDKCLGLTDIGLAQIAVGCSRLESLSLK 179
LL+ +DVS+C D+ +A++ LR L++ C +TD L ++ C LE+L L+
Sbjct: 125 LLQFLDVSYCRKLSDKGLSAVAEGCHDLRALHLAGCRFITDESLKSLSERCRDLEALGLQ 184
Query: 180 WCLEISDLGIDXXXXXXXXXXXXDVSYLKVTSESLRSIASLLK-----LERLIMVGCYLV 234
C I+D G+ D++ K ++ ++S+ K L+ L ++ CY V
Sbjct: 185 GCTNITDSGLADLVKGCRKIKSLDIN--KCSNVGDAGVSSVAKACASSLKTLKLLDCYKV 242
Query: 235 DDVGLRFLGNGCPLLKTIDVSRCNCVSSSGAISVITG-HHGLEQMAAGYCLFEFSAPLVD 293
+ + L C L+T+ + C +S + + L+ + +CL + L
Sbjct: 243 GNESISSLAQFCKNLETLIIGGCRDISDESIMLLADSCKDSLKNLRMDWCLNISDSSLSC 302
Query: 294 CLETLKCLSIIRIDGV-RVSDFILQTIGT-NCKSLVELGLSKCTGVTDIGITQIVSGCGN 351
L+ K L + I V+D + +G+ + L L +S CT +T GI +++ C +
Sbjct: 303 ILKQCKNLEALDIGCCEEVTDTAFRDLGSDDVLGLKVLKVSNCTKITVTGIGKLLDKCSS 362
Query: 352 LKMIDLTCCRYV 363
L+ ID+ +V
Sbjct: 363 LEYIDVRSLPHV 374
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 77/149 (51%), Gaps = 3/149 (2%)
Query: 414 GMNDTALKYLSRCSELVR-LKLGLCTNISDIGLAHIAFNCPKMSELDLYRCVCIGDDGLA 472
G+ DT L + RC L++ L + C +SD GL+ +A C + L L C I D+ L
Sbjct: 110 GITDTGLASIGRCLSLLQFLDVSYCRKLSDKGLSAVAEGCHDLRALHLAGCRFITDESLK 169
Query: 473 GLADRCKKLIKLNVSYCKRITDRGM-EYISHLAELSDLEMRGLSSITSIGVKAVAIGC-T 530
L++RC+ L L + C ITD G+ + + ++ L++ S++ GV +VA C +
Sbjct: 170 SLSERCRDLEALGLQGCTNITDSGLADLVKGCRKIKSLDINKCSNVGDAGVSSVAKACAS 229
Query: 531 RLADLDLKQCEKVDDSGFCALAFYSQNLR 559
L L L C KV + +LA + +NL
Sbjct: 230 SLKTLKLLDCYKVGNESISSLAQFCKNLE 258
>AT3G58530.1 | Symbols: | RNI-like superfamily protein |
chr3:21645759-21648219 FORWARD LENGTH=353
Length = 353
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 3/210 (1%)
Query: 310 RVSDFILQTIGTNCKSLVELGLSKCTGVTDIGITQIVSGCGNLKMIDLTCCRYVXXXXXX 369
++SD ++ I + C L + VTD GI +V C ++ ++L+ C+ +
Sbjct: 123 KISDNGIEAITSICPKLKVFSIYWNVRVTDAGIRNLVKNCRHITDLNLSGCKSLTDKSMQ 182
Query: 370 XXXXXCPYLVCLKLESCDMVTENGLYRLGSNXXXXXXXXXXXXSGMNDTALKYLSRCSEL 429
P L L + C +T++GL ++ SG D A +S ++L
Sbjct: 183 LVAESYPDLESLNITRCVKITDDGLLQVLQKCFSLQTLNLYALSGFTDKAYMKISLLADL 242
Query: 430 VRLKLGLCTNISDIGLAHIAFNCPKMSELDLYRCVCIGDDGLAGLADRCKKLIKLNVSYC 489
L + NISD G+ HIA C K+ L+L CV I D G+ +A+ C L L++
Sbjct: 243 RFLDICGAQNISDEGIGHIA-KCNKLESLNLTWCVRITDAGVNTIANSCTSLEFLSLFGI 301
Query: 490 KRITDRGMEYISHL--AELSDLEMRGLSSI 517
+TDR +E +S L+ L++ G + I
Sbjct: 302 VGVTDRCLETLSQTCSTTLTTLDVNGCTGI 331
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 6/207 (2%)
Query: 351 NLKMIDLTCCRYVXXXXXXXXXXXCP----YLVCLKLESCDMVTENGLYRLGSNXXXXXX 406
+K I+L + V CP L L L C +++NG+ + S
Sbjct: 82 QVKHINLEFAQGVVDSHLKLVKTECPDALLSLEWLNLNVCQKISDNGIEAITSICPKLKV 141
Query: 407 XXXXXXSGMNDTALKYLSR-CSELVRLKLGLCTNISDIGLAHIAFNCPKMSELDLYRCVC 465
+ D ++ L + C + L L C +++D + +A + P + L++ RCV
Sbjct: 142 FSIYWNVRVTDAGIRNLVKNCRHITDLNLSGCKSLTDKSMQLVAESYPDLESLNITRCVK 201
Query: 466 IGDDGLAGLADRCKKLIKLNVSYCKRITDRGMEYISHLAELSDLEMRGLSSITSIGVKAV 525
I DDGL + +C L LN+ TD+ IS LA+L L++ G +I+ G+ +
Sbjct: 202 ITDDGLLQVLQKCFSLQTLNLYALSGFTDKAYMKISLLADLRFLDICGAQNISDEGIGHI 261
Query: 526 AIGCTRLADLDLKQCEKVDDSGFCALA 552
A C +L L+L C ++ D+G +A
Sbjct: 262 A-KCNKLESLNLTWCVRITDAGVNTIA 287
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 89/202 (44%), Gaps = 4/202 (1%)
Query: 298 LKCLSIIRIDGVRVSDFILQTIGTNCKSLVELGLSKCTGVTDIGITQIVSGCGNLKMIDL 357
LK SI VRV+D ++ + NC+ + +L LS C +TD + + +L+ +++
Sbjct: 139 LKVFSIYW--NVRVTDAGIRNLVKNCRHITDLNLSGCKSLTDKSMQLVAESYPDLESLNI 196
Query: 358 TCCRYVXXXXXXXXXXXCPYLVCLKLESCDMVTENGLYRLGSNXXXXXXXXXXXXSGMND 417
T C + C L L L + T+ ++ S ++D
Sbjct: 197 TRCVKITDDGLLQVLQKCFSLQTLNLYALSGFTDKAYMKI-SLLADLRFLDICGAQNISD 255
Query: 418 TALKYLSRCSELVRLKLGLCTNISDIGLAHIAFNCPKMSELDLYRCVCIGDDGLAGLADR 477
+ ++++C++L L L C I+D G+ IA +C + L L+ V + D L L+
Sbjct: 256 EGIGHIAKCNKLESLNLTWCVRITDAGVNTIANSCTSLEFLSLFGIVGVTDRCLETLSQT 315
Query: 478 CK-KLIKLNVSYCKRITDRGME 498
C L L+V+ C I R E
Sbjct: 316 CSTTLTTLDVNGCTGIKRRSRE 337
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 115/275 (41%), Gaps = 48/275 (17%)
Query: 84 LLSQGSLSWTRGLRRLVLSRATGVGHVGLELLVRACPLLEAVDVSHCWGYGDREAAALSC 143
LL+ SL R ++ + L A GV L+L+ CP A LS
Sbjct: 71 LLAALSLPRYRQVKHINLEFAQGVVDSHLKLVKTECP-----------------DALLS- 112
Query: 144 AARLRELNMDKCLGLTDIGLAQIAVGCSRLESLSLKWCLEISDLGIDXXXXXXXXXXXXD 203
L LN++ C ++D G+ I C +L+ S+ W + ++D GI
Sbjct: 113 ---LEWLNLNVCQKISDNGIEAITSICPKLKVFSIYWNVRVTDAGI-------------- 155
Query: 204 VSYLKVTSESLRSIASLLKLERLIMVGCYLVDDVGLRFLGNGCPLLKTIDVSRCNCVSSS 263
+ ++ R I L + GC + D ++ + P L++++++RC ++
Sbjct: 156 ----RNLVKNCRHITD------LNLSGCKSLTDKSMQLVAESYPDLESLNITRCVKITDD 205
Query: 264 GAISVITGHHGLEQMAAGYCLFEFSAPLVDCLETLKCLSIIRIDGVR-VSDFILQTIGTN 322
G + V+ L+ + Y L F+ + L L + I G + +SD + I
Sbjct: 206 GLLQVLQKCFSLQTLNL-YALSGFTDKAYMKISLLADLRFLDICGAQNISDEGIGHIA-K 263
Query: 323 CKSLVELGLSKCTGVTDIGITQIVSGCGNLKMIDL 357
C L L L+ C +TD G+ I + C +L+ + L
Sbjct: 264 CNKLESLNLTWCVRITDAGVNTIANSCTSLEFLSL 298
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 71/134 (52%), Gaps = 6/134 (4%)
Query: 57 GLLQKCCNIETLDLSWCPRIDDGTVSVLLSQGSLSWTRGLRRLVLSRATGVGHVGLELLV 116
L++ C +I L+LS C + D ++ ++ L L ++R + GL ++
Sbjct: 157 NLVKNCRHITDLNLSGCKSLTDKSMQLVAESYP-----DLESLNITRCVKITDDGLLQVL 211
Query: 117 RACPLLEAVDVSHCWGYGDREAAALSCAARLRELNMDKCLGLTDIGLAQIAVGCSRLESL 176
+ C L+ +++ G+ D+ +S A LR L++ ++D G+ IA C++LESL
Sbjct: 212 QKCFSLQTLNLYALSGFTDKAYMKISLLADLRFLDICGAQNISDEGIGHIA-KCNKLESL 270
Query: 177 SLKWCLEISDLGID 190
+L WC+ I+D G++
Sbjct: 271 NLTWCVRITDAGVN 284
>AT1G80630.1 | Symbols: | RNI-like superfamily protein |
chr1:30308879-30310615 REVERSE LENGTH=578
Length = 578
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 132/566 (23%), Positives = 214/566 (37%), Gaps = 80/566 (14%)
Query: 29 WRLVCKEFLRVESLTRNSVRILRIEFLLGLLQKCCNIETLDLSWCPRIDDGTV----SVL 84
W L+CK ++ + R L+ + TL LS R+ V +V
Sbjct: 8 WELICK------AIDEDDYR---------FLESVSLVSTLFLSITNRVRSTFVVTDRAVP 52
Query: 85 LSQGSLSWTRGLRRLVLSRATGVGHVGLELLVRACPLLEAVDVSHCWGYGDREAAALSCA 144
L L R L+R+ S T + L + R+ E+VDVS + D E
Sbjct: 53 LLNRHLLRFRNLKRIRFSDFTQDLNSILLQVSRSGLDFESVDVSQTRYFPDFEMK----- 107
Query: 145 ARLRELNMDKCLGLTDIGLAQIAVGCSRLESLSLKWCLEISDLGIDXXXXXXXXXXXXDV 204
++EL G +D L I V LE L + + +
Sbjct: 108 -NVKELKCYGVGGFSDSDLVSIGVNFPLLEKLDISY---------------------PNS 145
Query: 205 SYLKVTSESLRSIASLLK-LERLIMVGCYLVDDVGLRFLGNGCPLLKTIDVSRCNCVSSS 263
S +V+ + ++S LK L ++ + G + D L L C LL+ I C+ +SS
Sbjct: 146 SPSRVSDSGVIELSSNLKGLLKINISGNSFITDKSLIALSQNCLLLREIIFRDCDFISSD 205
Query: 264 GAISVITGHHGLEQMA-AGYCLFEFSAPLVDCLETLKCLSIIRIDGVRVSDFILQTIGTN 322
V+ LE +A G L + L D +CL+ + + +SD +L I +
Sbjct: 206 CIKFVLRNSRNLESLAINGIGLRPRESLLTDAFLFARCLTELDLSDSFLSDDLLCLIASA 265
Query: 323 CKSLVELGLSKCTGVTDIGITQIVSGCGNLKMIDLTCCRYVXXXXXXXXXXXCPYLVCLK 382
L +L LS C G T GI ++ +L ++L ++ L L
Sbjct: 266 KLPLKKLLLSDCHGFTFDGILYLLDKYQSLVHLNLKGANFLSDEMVMKLGMFFRRLTFLN 325
Query: 383 LESCDMVTENGLYRLGSNXXXXXXXXXXXXSGMNDTALKYLSRCSELVR----LKLGLCT 438
L C +T + + G N +Y + L L
Sbjct: 326 LSFCSKLTGLAFFSIIERCVSLRCMIMV---GTNFGVEEYTKDTKDFKSGVKFLYLSRNH 382
Query: 439 NISDIGLAHIAFNCPKMSELDLYRCVCIGDDGLAGLADRCKKLIKLNVSYCKRIT----- 493
N+ D L I+ +CP + LD+ +C I DG+ + C KL L++S C I
Sbjct: 383 NLLDECLEKISRHCPFIESLDVAQCPGITRDGILEVWRNCGKLRSLDISRCTGIKSLGVV 442
Query: 494 ------------------DRGMEYISHLAE-LSDLEMRGLSSITSIGVKAVAIGCTRLAD 534
D ++ IS L L+++G +++S GVK V C RL +
Sbjct: 443 DFELPKLESLRACGTWIDDEALDMISKKCRGLLHLDLQGCLNVSSRGVKEVVQSCIRLRE 502
Query: 535 LDLKQCEKVDDSGFCALAFYSQNLRQ 560
++LK CE D + + F + +LR+
Sbjct: 503 INLKYCE-ADKKMYTWMVFANPSLRK 527
>AT5G67250.1 | Symbols: SKIP2, VFB4 | SKP1/ASK1-interacting protein
2 | chr5:26831677-26833260 REVERSE LENGTH=527
Length = 527
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 140/355 (39%), Gaps = 64/355 (18%)
Query: 154 KCLGLTDIGLAQIAVGCSRLESLSLKWCLEISDLGIDXXXXXXXXXXXXDVSYLKVTSES 213
K + L+D LA I+V C L + L+ C EI+DLG++ +
Sbjct: 116 KSVSLSDEALAMISVRCLNLTRVKLRGCREITDLGME---------------------DF 154
Query: 214 LRSIASLLKLERLIMVGCYLVDDVGLRFLGNGCPLLKTIDVSRCNCVSSSGAISVITGHH 273
++ +L KL VG G+ + C LL+ + V R + + + +
Sbjct: 155 AKNCKNLKKLS----VGSCNFGAKGVNAMLEHCKLLEELSVKRLRGIHEAAELIHLPDDA 210
Query: 274 GLEQMAAGYCLFEFS-----APLVDCLETLKCLSIIRIDGVRVSDFILQTIGTNCKSLVE 328
+ + CL E PL+ TLK L IIR G D +LQ I SL E
Sbjct: 211 SSSSLRS-ICLKELVNGQVFEPLLATTRTLKTLKIIRCLG--DWDKVLQMIANGKSSLSE 267
Query: 329 LGLSKCTGVTDIGITQIVSGCGNLKMIDLTCCRYVXXXXXXXXXXXCPYLVCLKLES--C 386
+ L + V+DIG++ I S C N++ + + C L L ++
Sbjct: 268 IHLERLQ-VSDIGLSAI-SKCSNVETLHIVKTPECSNFGLIYVAERCKLLRKLHIDGWRT 325
Query: 387 DMVTENGLYRLGSNXXXXXXXXXXXXSGMNDTALKYLSRCSELVRLKLGLCTNISDIGLA 446
+ + + GL L C L L L + N + + LA
Sbjct: 326 NRIGDEGL-------------------------LSVAKHCLNLQELVL-IGVNATHMSLA 359
Query: 447 HIAFNCPKMSELDLYRCVCIGDDGLAGLADRCKKLIKLNVSYCKRITDRGMEYIS 501
IA NC K+ L L IGD +A +A +C L K + C ++DRG+E ++
Sbjct: 360 AIASNCEKLERLALCGSGTIGDTEIACIARKCGALRKFCIKGCP-VSDRGIEALA 413
>AT1G55590.1 | Symbols: | RNI-like superfamily protein |
chr1:20769476-20771756 REVERSE LENGTH=607
Length = 607
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 111/273 (40%), Gaps = 39/273 (14%)
Query: 296 ETLKCLSIIR------IDGVRVSDFILQTIGTNCKSLVELGLSKCTGVTDIGITQIVSGC 349
+ L LS++R I R++D + + CK L + L V+D G ++ C
Sbjct: 277 QQLTSLSLVRTCYNRKISFKRINDMGIFLLSEACKGLESVRLGGFPKVSDAGFASLLHSC 336
Query: 350 GNLKMIDLTCCRYVXXXXXXXXXXXCPYLVCLKLESCDMVTENGLYRLGSNXXXXXXXXX 409
NLK ++ + L ++L +C ++T + +LG
Sbjct: 337 RNLKKFEVRGAFLLSDLAFHDVTGSSCSLQEVRLSTCPLITSEAVKKLG----------- 385
Query: 410 XXXSGMNDTALKYLSRCSELVRLKLGLCTNISDIGLAHIAFNCPKMSELDLYRCVCIGDD 469
C L L LG C +ISD L ++ K++ L+L + D
Sbjct: 386 ---------------LCGNLEVLDLGSCKSISDSCLNSVS-ALRKLTSLNLAGAD-VTDS 428
Query: 470 GLAGLADRCKKLIKLNVSYCKRITDRGMEYI-----SHLAELSDLEMRGLSSITSIGVKA 524
G+ L + +L++ C+R++DRG+ Y+ + LS L++ + I+ +
Sbjct: 429 GMLALGKSDVPITQLSLRGCRRVSDRGISYLLNNEGTISKTLSTLDLGHMPGISDRAIHT 488
Query: 525 VAIGCTRLADLDLKQCEKVDDSGFCALAFYSQN 557
+ C L +L ++ C V DS +LA + +
Sbjct: 489 ITHCCKALTELSIRSCFHVTDSSIESLATWERQ 521
>AT4G33210.1 | Symbols: SLOMO | F-box family protein |
chr4:16015971-16020697 REVERSE LENGTH=990
Length = 990
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 101/260 (38%), Gaps = 50/260 (19%)
Query: 287 FSAPLVDCLE-----TLKCLSIIRIDGVRVSDFILQTIGTNCKSLVELGLSKCTGVTDIG 341
+ AP V+ L TL+ L ++ I +S+ Q +G C L + +S + G
Sbjct: 264 YGAPAVNALAMKAATTLRNLEVLTIGKGHISESFFQALG-ECNMLRSVTVSD--AILGNG 320
Query: 342 ITQIVSGCGNLKMIDLTCCRYVXXXXXXXXXXXCPYLVCLKLESCDMVTENGLYRLGSNX 401
+I L+ + +T CR + CP L L L+ +M
Sbjct: 321 AQEIHLSHDRLRELKITKCRVMRLSIR------CPQLRSLSLKRSNMS------------ 362
Query: 402 XXXXXXXXXXXSGMNDTALKYLSRCSELVRLKLGLCTNISDIGLAHIAFNCPKMSELDLY 461
+ + C L L + C + D + A +CP++ LD+
Sbjct: 363 -------------------QAMLNCPLLQLLDIASCHKLLDAAIRSAAISCPQLESLDVS 403
Query: 462 RCVCIGDDGLAGLADRCKKLIKLNVSYCKRITDRGMEYISHLAELSDLEMRGLSSITSIG 521
C C+ D+ L +A C L LN SYC I+ +E + HL L+ L++ ITS
Sbjct: 404 NCSCVSDETLREIAQACANLHILNASYCPNIS---LESV-HLPMLTVLKLHSCEGITSAS 459
Query: 522 VKAVAIGCTRLADLDLKQCE 541
+ +A L L+L C
Sbjct: 460 MTWIA-NSPALEVLELDNCN 478
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 130/588 (22%), Positives = 223/588 (37%), Gaps = 142/588 (24%)
Query: 62 CCNIETLDLSWCPRIDDGTVSVLLSQGSLSWTRGLRRLVLSRATGVGHVGLELLVRACPL 121
C +E+LD+S C + D T+ + + L + A+ ++ LE + P+
Sbjct: 394 CPQLESLDVSNCSCVSDETLREI--------AQACANLHILNASYCPNISLESV--HLPM 443
Query: 122 LEAVDVSHCWGYGDREAAALSCAARLRELNMDKCLGLTDIGLAQIAVGCSRLESLSLKWC 181
L + + C G ++ + L L +D C LT + L SRL+S+SL C
Sbjct: 444 LTVLKLHSCEGITSASMTWIANSPALEVLELDNCNLLTTVSL-----HLSRLQSISLVHC 498
Query: 182 LEISDLGIDXXXXXXXXXXX-XDVSYLKVTSESLRSIASLLKLERL--IMVGCYLVDDVG 238
+ +DL + + + +TS +LR +A L K E L +++ C+ + +V
Sbjct: 499 RKFTDLNLQSIMLSSITVSNCPALRRITITSNALRRLA-LQKQENLTTLVLQCHSLQEVD 557
Query: 239 L---RFLGN----------GCPLLKTIDVSRCN-------CVSSSGAISVI--------- 269
L L N GCP+LK++ + C C SS ++S++
Sbjct: 558 LSDCESLSNSVCKIFSDDGGCPMLKSLILDNCESLTAVRFCNSSLASLSLVGCRAVTSLE 617
Query: 270 ------------------TGHH---GLEQMAAGYC----LFEFSAPLVDCLE-------- 296
T L + G C + AP + LE
Sbjct: 618 LKCPRIEQICLDGCDHLETAFFQPVALRSLNLGICPKLSVLNIEAPYMVSLELKGCGVLS 677
Query: 297 --TLKCLSIIRIDGV---RVSDFILQTIGTNCKSLVELGLSKCTGVTDIGITQIVSGCGN 351
++ C + +D ++ D L +C + L L C + G++ + +G N
Sbjct: 678 EASIMCPLLTSLDASFCSQLRDDCLSATTASCPLIESLVLMSCPSIGSDGLSSL-NGLPN 736
Query: 352 LKMIDLTCCRYVXXXXXXXXXXXCPYLVCLKLESCDMVTENGL---YRLGSNXXXXXXXX 408
L ++DL+ Y C L LKL++C +T++ L Y+ G+
Sbjct: 737 LTVLDLS---YTFLMNLEPVFKSCIQLKVLKLQACKYLTDSSLEPLYKEGA--------- 784
Query: 409 XXXXSGMNDTALKYLSRCSELVRLKLGLCTNISDIGLAHIAFN-CPKMSELDL------- 460
+ + L Y + C + L CT+ L H++ N C M +LD
Sbjct: 785 ---LPALEELDLSYGTLCQTAIDDLLACCTH-----LTHLSLNGCVNMHDLDWGSTSVHL 836
Query: 461 --YRCVCIGDDGLAGLADRCKKLIK-LNVSYCKRITD---RGMEYISHLAEL-------- 506
Y V D A+ +L++ LN C I HL+ L
Sbjct: 837 FDYFGVYSSSDNTQEPAETANRLLQNLNCVGCPNIRKVLIPPAARFYHLSTLNLSLSVNL 896
Query: 507 -------SDLEMRGLSSITSIGVKAVAIGCTRLADLDLKQCEKVDDSG 547
S+L + LS+ S+ V + +GC RLA L L+ C +D++G
Sbjct: 897 KEVDLTCSNLVLLNLSNCCSLEV--LKLGCPRLASLFLQSC-NMDEAG 941
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 151/384 (39%), Gaps = 86/384 (22%)
Query: 10 LTEDLLIRILDKLGS-DRKPWRLVCKEFLRVESLTRNSVRILRIEFLLGLLQKCCNIETL 68
LT+DLL + L D +VC+++ RV S + R+L E + +++ N+
Sbjct: 196 LTDDLLHMVFSFLNHVDLCRSAMVCRQW-RVASAHEDFWRVLNFENIRISMEQFENM--- 251
Query: 69 DLSWCPRIDDGT-VSVL-------LSQGSLSWTRGLRRLVLSRATGVGHVGLELLVRA-- 118
C R + T V+V L+ + + R L L + G GH+ E +A
Sbjct: 252 ----CSRYPNATEVNVYGAPAVNALAMKAATTLRNLEVLTI----GKGHIS-ESFFQALG 302
Query: 119 -CPLLEAVDVSHC-WGYGDREAAALSCAARLRELNMDKCLGLTDIGLAQIAVGCSRLESL 176
C +L +V VS G G +E RLREL + KC + ++++ C +L SL
Sbjct: 303 ECNMLRSVTVSDAILGNGAQEIHL--SHDRLRELKITKC------RVMRLSIRCPQLRSL 354
Query: 177 SLKWCLEISDLGIDXXXXXXXXXXXXDVSYLKVTSESLRSIASLLKLERLIMVGCYLVDD 236
SLK S +++ + L+ L + C+ + D
Sbjct: 355 SLK------------------------------RSNMSQAMLNCPLLQLLDIASCHKLLD 384
Query: 237 VGLRFLGNGCPLLKTIDVSRCNCVSSSGAISVITGHHGLEQMAAGYC----LFEFSAPLV 292
+R CP L+++DVS C+CVS + L + A YC L P++
Sbjct: 385 AAIRSAAISCPQLESLDVSNCSCVSDETLREIAQACANLHILNASYCPNISLESVHLPML 444
Query: 293 DCLETLKCLSIIRIDGVRVSDF------------ILQTIGTNCKSLVELGLSKCTGVTDI 340
L+ C I +++ +L T+ + L + L C TD+
Sbjct: 445 TVLKLHSCEGITSASMTWIANSPALEVLELDNCNLLTTVSLHLSRLQSISLVHCRKFTDL 504
Query: 341 GITQI------VSGCGNLKMIDLT 358
+ I VS C L+ I +T
Sbjct: 505 NLQSIMLSSITVSNCPALRRITIT 528
>AT3G07550.2 | Symbols: | RNI-like superfamily protein |
chr3:2409946-2411133 FORWARD LENGTH=395
Length = 395
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 153/374 (40%), Gaps = 55/374 (14%)
Query: 4 ESVFCLLTEDLLIRILDKLGS--DRKPWRLVCKEFLRVESLTRNSVRI------------ 49
E+ L +D L I +L S D + L C +L +++++R S++
Sbjct: 12 ETSIIHLPDDCLSFIFQRLDSVADHDSFGLTCHRWLNIQNISRRSLQFQCSFSVLNPSSL 71
Query: 50 ------LRIEFLLGLLQKCCNIETLDLSWCPRIDDGTVSVLLSQGSLSWTRGLRRLVLSR 103
+ L LL + +E L LS C ++D ++ L G+ L L L
Sbjct: 72 SQTNPDVSSHHLHRLLTRFQWLEHLSLSGCTVLNDSSLDSLRYPGA-----RLHTLYLDC 126
Query: 104 ATGVGHVGLELLVRACPLLEAVDVSHCWGYGDREAAALSCAA-RLRELNMDKCLGLTDIG 162
G+ G+ + CP L V + C D L+ A+ L+ +N+ C ++D G
Sbjct: 127 CFGISDDGISTIASFCPNLSVVSLYRC-NISDIGLETLARASLSLKCVNLSYCPLVSDFG 185
Query: 163 LAQIAVGCSRLESLSLKWCLEISDLGIDXXXXXXXXXXXXDVSYLKVTSESLRSIASLLK 222
+ ++ C +LES+ + C I+ +G D L+ + ++
Sbjct: 186 IKALSQACLQLESVKISNCKSITGVGFSGCSPTLGYVDA-DSCQLEPKGITGIISGGGIE 244
Query: 223 LERLIMVGCYLVDDVGLRFLGNG-CPLLKTIDVSRCNCVSSSGAISVITGHHGLEQMAAG 281
+ V CY+ D GL +G+G L+ +++ C V G +E +A G
Sbjct: 245 FLNISGVSCYIRKD-GLVPIGSGIASKLRILNLRMCRTV----------GDESIEAIAKG 293
Query: 282 YCLFEFSAPLVDCLETLKCLSIIRIDGVRVSDFILQTIGTNCKSLVELGLSKCTGVTDIG 341
L + L C E ++I G + +G C++L +L +++C + D G
Sbjct: 294 CPLLQ-EWNLALCHE-------VKISG-------WEAVGKWCRNLKKLHVNRCRNLCDQG 338
Query: 342 ITQIVSGCGNLKMI 355
+ + GC NL+++
Sbjct: 339 LLALRCGCMNLQIL 352
>AT3G07550.1 | Symbols: | RNI-like superfamily protein |
chr3:2409946-2411133 FORWARD LENGTH=395
Length = 395
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 153/374 (40%), Gaps = 55/374 (14%)
Query: 4 ESVFCLLTEDLLIRILDKLGS--DRKPWRLVCKEFLRVESLTRNSVRI------------ 49
E+ L +D L I +L S D + L C +L +++++R S++
Sbjct: 12 ETSIIHLPDDCLSFIFQRLDSVADHDSFGLTCHRWLNIQNISRRSLQFQCSFSVLNPSSL 71
Query: 50 ------LRIEFLLGLLQKCCNIETLDLSWCPRIDDGTVSVLLSQGSLSWTRGLRRLVLSR 103
+ L LL + +E L LS C ++D ++ L G+ L L L
Sbjct: 72 SQTNPDVSSHHLHRLLTRFQWLEHLSLSGCTVLNDSSLDSLRYPGA-----RLHTLYLDC 126
Query: 104 ATGVGHVGLELLVRACPLLEAVDVSHCWGYGDREAAALSCAA-RLRELNMDKCLGLTDIG 162
G+ G+ + CP L V + C D L+ A+ L+ +N+ C ++D G
Sbjct: 127 CFGISDDGISTIASFCPNLSVVSLYRC-NISDIGLETLARASLSLKCVNLSYCPLVSDFG 185
Query: 163 LAQIAVGCSRLESLSLKWCLEISDLGIDXXXXXXXXXXXXDVSYLKVTSESLRSIASLLK 222
+ ++ C +LES+ + C I+ +G D L+ + ++
Sbjct: 186 IKALSQACLQLESVKISNCKSITGVGFSGCSPTLGYVDA-DSCQLEPKGITGIISGGGIE 244
Query: 223 LERLIMVGCYLVDDVGLRFLGNG-CPLLKTIDVSRCNCVSSSGAISVITGHHGLEQMAAG 281
+ V CY+ D GL +G+G L+ +++ C V G +E +A G
Sbjct: 245 FLNISGVSCYIRKD-GLVPIGSGIASKLRILNLRMCRTV----------GDESIEAIAKG 293
Query: 282 YCLFEFSAPLVDCLETLKCLSIIRIDGVRVSDFILQTIGTNCKSLVELGLSKCTGVTDIG 341
L + L C E ++I G + +G C++L +L +++C + D G
Sbjct: 294 CPLLQ-EWNLALCHE-------VKISG-------WEAVGKWCRNLKKLHVNRCRNLCDQG 338
Query: 342 ITQIVSGCGNLKMI 355
+ + GC NL+++
Sbjct: 339 LLALRCGCMNLQIL 352
>AT2G36370.1 | Symbols: | ubiquitin-protein ligases |
chr2:15247894-15252800 FORWARD LENGTH=898
Length = 898
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 82/187 (43%), Gaps = 31/187 (16%)
Query: 212 ESLRSIASLLKLERLIMVGCYLVDDVGLRFLGNGCPLLKTIDVSRCNCVSSSGAISVITG 271
ESLR AS L++ + +G L +DV L+ L + CPLL++I V +S S SV+T
Sbjct: 637 ESLRPAASFLRVIS-VGLGASLGEDV-LKLLPSTCPLLESI-VLHFQEISDSALTSVLTS 693
Query: 272 HHGLEQMAAGYCLFEFSAPLVDCLETLKCLSIIRIDGVRVSDFILQTIGTNCKSLVELGL 331
L+++A YC E S LQ+ + +L +L L
Sbjct: 694 LKHLQELALSYCFGEIS---------------------------LQSFKFSMPNLRKLRL 726
Query: 332 SKCT-GVTDIGITQIVSGCGNLKMIDLTCCRYVXXXXXXXXXXXCPYLVCLKLESCDMVT 390
+ T +T+ + + C NL + L C ++ P ++ L LE C +T
Sbjct: 727 ERVTRWMTNDDLLVLTQSCPNLTELSLVGCLHLTSDCQPIISAGWPGMISLHLEECGSIT 786
Query: 391 ENGLYRL 397
ENG+ L
Sbjct: 787 ENGVASL 793
>AT1G80570.1 | Symbols: | RNI-like superfamily protein |
chr1:30290828-30292231 FORWARD LENGTH=467
Length = 467
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%)
Query: 466 IGDDGLAGLADRCKKLIKLNVSYCKRITDRGMEYISHLAELSDLEMRGLSSITSIGVKAV 525
+ D GL L C L L +S+C ITD G+ ++S ELS L++ IT GV ++
Sbjct: 84 VDDQGLLVLTTNCHSLTDLTLSFCTFITDVGIGHLSSCPELSSLKLNFAPRITGCGVLSL 143
Query: 526 AIGCTRLADLDLKQCEKV 543
A+GC +L L L +C V
Sbjct: 144 AVGCKKLRRLHLIRCLNV 161
>AT1G80570.3 | Symbols: | RNI-like superfamily protein |
chr1:30290828-30292231 FORWARD LENGTH=467
Length = 467
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%)
Query: 466 IGDDGLAGLADRCKKLIKLNVSYCKRITDRGMEYISHLAELSDLEMRGLSSITSIGVKAV 525
+ D GL L C L L +S+C ITD G+ ++S ELS L++ IT GV ++
Sbjct: 84 VDDQGLLVLTTNCHSLTDLTLSFCTFITDVGIGHLSSCPELSSLKLNFAPRITGCGVLSL 143
Query: 526 AIGCTRLADLDLKQCEKV 543
A+GC +L L L +C V
Sbjct: 144 AVGCKKLRRLHLIRCLNV 161
>AT1G80570.2 | Symbols: | RNI-like superfamily protein |
chr1:30290661-30292231 FORWARD LENGTH=480
Length = 480
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%)
Query: 466 IGDDGLAGLADRCKKLIKLNVSYCKRITDRGMEYISHLAELSDLEMRGLSSITSIGVKAV 525
+ D GL L C L L +S+C ITD G+ ++S ELS L++ IT GV ++
Sbjct: 97 VDDQGLLVLTTNCHSLTDLTLSFCTFITDVGIGHLSSCPELSSLKLNFAPRITGCGVLSL 156
Query: 526 AIGCTRLADLDLKQCEKV 543
A+GC +L L L +C V
Sbjct: 157 AVGCKKLRRLHLIRCLNV 174
>AT4G30640.1 | Symbols: | RNI-like superfamily protein |
chr4:14952670-14953682 FORWARD LENGTH=301
Length = 301
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 23/146 (15%)
Query: 417 DTALKYLS-RCSELVRLKLGLCTNISDIGLAHIAFNCPKMSELDLYRCVCIGDDGLAGLA 475
+ +L Y + RC L L + C N++D + IA NCP + ELD+ I + L L
Sbjct: 113 ERSLSYAAERCPNLEVLWIKNCPNVTDASMEKIAMNCPNLRELDISYSYGITHESLITLG 172
Query: 476 DRCKKLIKLNVSYCKRITDR------GMEYIS---------------HLAELSDLEMRGL 514
C+ L L + R+ ++Y++ ++ +L LE+R
Sbjct: 173 RSCQNLKILKRNLLPRLGPSLPTIVAPLDYLATFPRYGNIEARIIGKYMTQLKHLEIR-Y 231
Query: 515 SSITSIGVKAVAIGCTRLADLDLKQC 540
S++T+ G+ +V GC+ L +DL+ C
Sbjct: 232 STLTARGLDSVCKGCSNLEYMDLRGC 257
>AT1G15740.1 | Symbols: | Leucine-rich repeat family protein |
chr1:5411509-5414544 FORWARD LENGTH=585
Length = 585
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 466 IGDDGLAGLADRCKKLIKLNVSYCKRITDRGMEYISHLAELSDLEMRGLSSITSIGVKAV 525
I D GL L C L LN ++C +I++RG+ ++S L+ L+ L R ++IT+ G++A+
Sbjct: 150 ITDSGLVSLKG-CTNLESLNFNFCDQISNRGLVHLSGLSNLTSLSFRRNAAITAQGMRAL 208
Query: 526 AIGCTRLADLDLKQCEKVD 544
+ L LDL++C +D
Sbjct: 209 S-NLVNLKKLDLEKCPGID 226