Miyakogusa Predicted Gene

Lj1g3v4915280.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4915280.1 Non Chatacterized Hit- tr|I1NB35|I1NB35_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.44036
PE,67.86,0,Homeodomain,Homeodomain; no description,Homeodomain-like;
Homeodomain-like,Homeodomain-like; Conserv,CUFF.33574.1
         (1010 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G02560.2 | Symbols: LD | Homeodomain-like superfamily protein...   461   e-129
AT4G02560.1 | Symbols: LD | Homeodomain-like superfamily protein...   461   e-129
AT1G19860.1 | Symbols:  | Zinc finger C-x8-C-x5-C-x3-H type fami...    52   2e-06

>AT4G02560.2 | Symbols: LD | Homeodomain-like superfamily protein |
           chr4:1123656-1128252 REVERSE LENGTH=953
          Length = 953

 Score =  461 bits (1185), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 254/463 (54%), Positives = 323/463 (69%), Gaps = 32/463 (6%)

Query: 1   MDLWNDDFSQLEIGTTVDSLQSFLASQRELFQSQIDQFQHIVVTQCNLTGVNPLSQEMAA 60
           MD + ++   +EIG++V+SL   L SQ+ LF SQIDQ Q +VV QC LTGVNPL+QEMAA
Sbjct: 1   MDAFKEE---IEIGSSVESLMELLDSQKVLFHSQIDQLQDVVVAQCKLTGVNPLAQEMAA 57

Query: 61  GALSIKIGKRPRDLLNPKAVNYMQSVFSIKDAISKKESREISAMFGVTVTQVRDFFTSQR 120
           GALSIKIGKRPRDLLNPKAV Y+Q+VF+IKDAISK+ESREISA+FG+TV QVR+FF +Q+
Sbjct: 58  GALSIKIGKRPRDLLNPKAVKYLQAVFAIKDAISKRESREISALFGITVAQVREFFVTQK 117

Query: 121 SRVRRLVQLSKQRALRSSSCEEPHGEQIN--------SDHVRPINPPLLDTAGSTNAEET 172
           +RVR+ V+LS+++ + S++    H  Q +        ++HV P+  PL     S + E  
Sbjct: 118 TRVRKQVRLSREKVVMSNT----HALQDDGVPENNNATNHVEPV--PL----NSIHPEAC 167

Query: 173 SCSTQEA---AL-------SDLDDSDKHFVENIFSLIQKEETFSGQEKLMEWILTIQNFS 222
           S S  E    AL        D+ DSDK+FVENIFSL++KEETFSGQ KLMEWI+ IQ+ S
Sbjct: 168 SISWGEGETVALIPPEDIPPDISDSDKYFVENIFSLLRKEETFSGQVKLMEWIMQIQDAS 227

Query: 223 VLSWFLTKGGAMSLATWLNKAAVEEQTSVXXXXXXXXXXXXXHKALPAHISAILQSVNGL 282
           VL WFL+KGG + L TWL++AA EEQTSV             HKA P ++SAILQSVNGL
Sbjct: 228 VLIWFLSKGGVLILTTWLSQAASEEQTSVLLLILKVLCHLPLHKASPENMSAILQSVNGL 287

Query: 283 RFYRTQDISNRARVLLSKWSKLLARNQALKKPNGVKTSGEKQMMLSHRQASESWHSNIDL 342
           RFYR  DISNRA+ LLS+W+KL A+ QA+KK N   +  + Q  L  +Q+      +   
Sbjct: 288 RFYRISDISNRAKGLLSRWTKLFAKIQAMKKQNRNSSQIDSQSQLLLKQSIAEIMGDSSN 347

Query: 343 PEDILAPSNEYSDNFRKLEPLQALKLLPPS-DDSHKKPTLGVSSSHARERRKVQLVEQPG 401
           PEDIL+ SN  S+N R++E  Q  KLL  S DDS KK  LG + S+ +ERRKVQ+VEQPG
Sbjct: 348 PEDILSLSNGKSENVRRIESSQGPKLLLTSADDSTKKHMLGSNPSYNKERRKVQMVEQPG 407

Query: 402 QKSVSRSPQVARVAPVSQSRPMSADDIQKAKLRASFMQSKYGK 444
           QK+  +SPQ  R+    +SRPMSADDIQKAK+RA +MQSK  K
Sbjct: 408 QKAAGKSPQTVRIGTSGRSRPMSADDIQKAKMRALYMQSKNSK 450



 Score =  157 bits (398), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 99/255 (38%), Positives = 145/255 (56%), Gaps = 16/255 (6%)

Query: 474 SKVHVPPKIEEDKKPPVLPSKNTIRLDASYSKLKMDLKESPWEKCKRVQIPWKTPAEVKL 533
           S V VP + +E KKP   P   + ++      +KM   ++  + CKR QI W  P  ++L
Sbjct: 540 SAVIVPVQADEIKKPSTPPKSISSKVGV---MMKMS-SQTILKNCKRKQIDWHVPPGMEL 595

Query: 534 NDTWKVGNGENSKEVDVQTNRHRREKDTIYQTIKEMPSNPKEPWDLEMDYDDTLTPEIPI 593
           ++ W+V  G NSKE DVQ NR+RRE++T YQ+++ +P NPKEPWD EMDYDD+LTPEIP 
Sbjct: 596 DELWRVAAGGNSKEADVQRNRNRRERETTYQSLQTIPLNPKEPWDREMDYDDSLTPEIPS 655

Query: 594 EQLPDGDSAEVVATPNDVATHAVQSVASTSSTGNXXXXXXXXXXXXXXXKNPELVFALTS 653
           +Q P+    E +  P D       +  + +++ +               KNP+LV+ALTS
Sbjct: 656 QQPPE----ESLTEPQDSLDERRIAAGAATTSSSLSSPEPDLELLAALLKNPDLVYALTS 711

Query: 654 GQAGNIPNEETMKLLDMIKRSSVXXXXXXXXXXXXXXXAKSPETVEVSLPSPTPSNDPRT 713
           G+  N+  ++ +KLLD+IK  +                 +  E VEVSLPSPTPS +P  
Sbjct: 712 GKPSNLAGQDMVKLLDVIKTGA--------PNSSSSSNKQVEERVEVSLPSPTPSTNPGM 763

Query: 714 NGWSTEASKNPFTRR 728
           +GW  E  +NPF+R+
Sbjct: 764 SGWGQEGIRNPFSRQ 778


>AT4G02560.1 | Symbols: LD | Homeodomain-like superfamily protein |
           chr4:1123656-1128252 REVERSE LENGTH=953
          Length = 953

 Score =  461 bits (1185), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 254/463 (54%), Positives = 323/463 (69%), Gaps = 32/463 (6%)

Query: 1   MDLWNDDFSQLEIGTTVDSLQSFLASQRELFQSQIDQFQHIVVTQCNLTGVNPLSQEMAA 60
           MD + ++   +EIG++V+SL   L SQ+ LF SQIDQ Q +VV QC LTGVNPL+QEMAA
Sbjct: 1   MDAFKEE---IEIGSSVESLMELLDSQKVLFHSQIDQLQDVVVAQCKLTGVNPLAQEMAA 57

Query: 61  GALSIKIGKRPRDLLNPKAVNYMQSVFSIKDAISKKESREISAMFGVTVTQVRDFFTSQR 120
           GALSIKIGKRPRDLLNPKAV Y+Q+VF+IKDAISK+ESREISA+FG+TV QVR+FF +Q+
Sbjct: 58  GALSIKIGKRPRDLLNPKAVKYLQAVFAIKDAISKRESREISALFGITVAQVREFFVTQK 117

Query: 121 SRVRRLVQLSKQRALRSSSCEEPHGEQIN--------SDHVRPINPPLLDTAGSTNAEET 172
           +RVR+ V+LS+++ + S++    H  Q +        ++HV P+  PL     S + E  
Sbjct: 118 TRVRKQVRLSREKVVMSNT----HALQDDGVPENNNATNHVEPV--PL----NSIHPEAC 167

Query: 173 SCSTQEA---AL-------SDLDDSDKHFVENIFSLIQKEETFSGQEKLMEWILTIQNFS 222
           S S  E    AL        D+ DSDK+FVENIFSL++KEETFSGQ KLMEWI+ IQ+ S
Sbjct: 168 SISWGEGETVALIPPEDIPPDISDSDKYFVENIFSLLRKEETFSGQVKLMEWIMQIQDAS 227

Query: 223 VLSWFLTKGGAMSLATWLNKAAVEEQTSVXXXXXXXXXXXXXHKALPAHISAILQSVNGL 282
           VL WFL+KGG + L TWL++AA EEQTSV             HKA P ++SAILQSVNGL
Sbjct: 228 VLIWFLSKGGVLILTTWLSQAASEEQTSVLLLILKVLCHLPLHKASPENMSAILQSVNGL 287

Query: 283 RFYRTQDISNRARVLLSKWSKLLARNQALKKPNGVKTSGEKQMMLSHRQASESWHSNIDL 342
           RFYR  DISNRA+ LLS+W+KL A+ QA+KK N   +  + Q  L  +Q+      +   
Sbjct: 288 RFYRISDISNRAKGLLSRWTKLFAKIQAMKKQNRNSSQIDSQSQLLLKQSIAEIMGDSSN 347

Query: 343 PEDILAPSNEYSDNFRKLEPLQALKLLPPS-DDSHKKPTLGVSSSHARERRKVQLVEQPG 401
           PEDIL+ SN  S+N R++E  Q  KLL  S DDS KK  LG + S+ +ERRKVQ+VEQPG
Sbjct: 348 PEDILSLSNGKSENVRRIESSQGPKLLLTSADDSTKKHMLGSNPSYNKERRKVQMVEQPG 407

Query: 402 QKSVSRSPQVARVAPVSQSRPMSADDIQKAKLRASFMQSKYGK 444
           QK+  +SPQ  R+    +SRPMSADDIQKAK+RA +MQSK  K
Sbjct: 408 QKAAGKSPQTVRIGTSGRSRPMSADDIQKAKMRALYMQSKNSK 450



 Score =  157 bits (398), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 99/255 (38%), Positives = 145/255 (56%), Gaps = 16/255 (6%)

Query: 474 SKVHVPPKIEEDKKPPVLPSKNTIRLDASYSKLKMDLKESPWEKCKRVQIPWKTPAEVKL 533
           S V VP + +E KKP   P   + ++      +KM   ++  + CKR QI W  P  ++L
Sbjct: 540 SAVIVPVQADEIKKPSTPPKSISSKVGV---MMKMS-SQTILKNCKRKQIDWHVPPGMEL 595

Query: 534 NDTWKVGNGENSKEVDVQTNRHRREKDTIYQTIKEMPSNPKEPWDLEMDYDDTLTPEIPI 593
           ++ W+V  G NSKE DVQ NR+RRE++T YQ+++ +P NPKEPWD EMDYDD+LTPEIP 
Sbjct: 596 DELWRVAAGGNSKEADVQRNRNRRERETTYQSLQTIPLNPKEPWDREMDYDDSLTPEIPS 655

Query: 594 EQLPDGDSAEVVATPNDVATHAVQSVASTSSTGNXXXXXXXXXXXXXXXKNPELVFALTS 653
           +Q P+    E +  P D       +  + +++ +               KNP+LV+ALTS
Sbjct: 656 QQPPE----ESLTEPQDSLDERRIAAGAATTSSSLSSPEPDLELLAALLKNPDLVYALTS 711

Query: 654 GQAGNIPNEETMKLLDMIKRSSVXXXXXXXXXXXXXXXAKSPETVEVSLPSPTPSNDPRT 713
           G+  N+  ++ +KLLD+IK  +                 +  E VEVSLPSPTPS +P  
Sbjct: 712 GKPSNLAGQDMVKLLDVIKTGA--------PNSSSSSNKQVEERVEVSLPSPTPSTNPGM 763

Query: 714 NGWSTEASKNPFTRR 728
           +GW  E  +NPF+R+
Sbjct: 764 SGWGQEGIRNPFSRQ 778


>AT1G19860.1 | Symbols:  | Zinc finger C-x8-C-x5-C-x3-H type family
           protein | chr1:6891654-6894400 REVERSE LENGTH=413
          Length = 413

 Score = 52.4 bits (124), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 41/81 (50%), Gaps = 1/81 (1%)

Query: 523 IPWKTPAEVKLNDTWKVGNGENSKEVDVQTNRHRREKDTIYQTIKEMPSNPKEPWDLE-M 581
           I WK   ++ L+  WKV  G+ SKEV+ Q  R  R  +  Y     +P NP  P D+E  
Sbjct: 77  IKWKCSVQILLDREWKVVAGDESKEVEAQNERELRVLEAFYPGASSIPPNPSVPADVEDS 136

Query: 582 DYDDTLTPEIPIEQLPDGDSA 602
            +DD  T  IPI  + D D A
Sbjct: 137 HHDDQQTIVIPILPVEDDDIA 157