Miyakogusa Predicted Gene

Lj1g3v4899070.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4899070.1 tr|Q00TX4|Q00TX4_OSTTA WGS project CAID00000000
data, contig chromosome 16 OS=Ostreococcus tauri
GN=,32.34,2e-18,seg,NULL; no description,Tetratricopeptide-like
helical; TPR-like,NULL; DUF3493,Protein of unknown f,CUFF.33547.1
         (482 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G02910.1 | Symbols: LPA1 | tetratricopeptide repeat (TPR)-con...   566   e-162
AT4G28740.1 | Symbols:  | FUNCTIONS IN: molecular_function unkno...   136   4e-32
AT1G55480.1 | Symbols: ZKT | protein containing PDZ domain, a K-...    54   2e-07

>AT1G02910.1 | Symbols: LPA1 | tetratricopeptide repeat
           (TPR)-containing protein | chr1:655749-658125 REVERSE
           LENGTH=453
          Length = 453

 Score =  566 bits (1460), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 287/417 (68%), Positives = 329/417 (78%), Gaps = 37/417 (8%)

Query: 66  TAESCVNLGLALFSKGRLGSMVXXXXXXXXXXXPTMVFNWVLQSSLLFFWISQVKDALTQ 125
           TAE CVN GL LF +GR                                    VKDAL Q
Sbjct: 74  TAELCVNTGLDLFKRGR------------------------------------VKDALVQ 97

Query: 126 FETALSLNPNPVEAQAAFYNKACCHAYRGEGKKAAECLRTALREYNLKFSTILNDPDLAS 185
           FETALSL PNP+E+QAA+YNKACCHAYRGEGKKA +CLR ALR+YNLKF+TILNDPDLAS
Sbjct: 98  FETALSLAPNPIESQAAYYNKACCHAYRGEGKKAVDCLRIALRDYNLKFATILNDPDLAS 157

Query: 186 FRALPEFKELQEEARLGGEDIGSSFRRDLKLISEVQAPFRGIRRFFYVALTAAAGVSLLL 245
           FRALPEFKELQEEARLGGEDIG +FRRDLKLISEV+APFRG+R+FFY A  AAAG+S+  
Sbjct: 158 FRALPEFKELQEEARLGGEDIGDNFRRDLKLISEVRAPFRGVRKFFYFAFAAAAGISMFF 217

Query: 246 TIPRLFLAIKGGDDAPGLLETSGNAAINIGGIVVFVALFFWDNKKEEEQLAQISRNETLS 305
           T+PRL  AI+GGD AP LLET+GNAAINIGGIVV V+LF W+NKKEEEQ+ QI+R+ETLS
Sbjct: 218 TVPRLVQAIRGGDGAPNLLETTGNAAINIGGIVVMVSLFLWENKKEEEQMVQITRDETLS 277

Query: 306 RLPLRLSTNRIVELVQLRDTVRPVILAGTKETVSLALRKAERFRSELIKRGVLLVPVIWX 365
           RLPLRLSTNR+VELVQLRDTVRPVILAG KETV+LA++KA+RFR+EL++RGVLLVPV+W 
Sbjct: 278 RLPLRLSTNRVVELVQLRDTVRPVILAGKKETVTLAMQKADRFRTELLRRGVLLVPVVWG 337

Query: 366 XXXXXXXXXXXXXLSSKAAAEALPSIGEDFEKRTQSITAKSKLKAEVRFKAEVISPAEWE 425
                         SSKAA  +LPSIGEDF+ R QS+ A+SKLK E+RFKAE +SP EWE
Sbjct: 338 ERKTPEIEKKGFGASSKAAT-SLPSIGEDFDTRAQSVVAQSKLKGEIRFKAETVSPGEWE 396

Query: 426 RWIRDQQKAEGVTVGEDVYIILRLDGRVRRSGKGMPDWQKIVNELPPMEALLSKLER 482
           RWIRDQQ +EGV  G+DVYIILRLDGRVRRSG+GMPDW +I  ELPPM+ +LSKLER
Sbjct: 397 RWIRDQQISEGVNPGDDVYIILRLDGRVRRSGRGMPDWAEISKELPPMDDVLSKLER 453


>AT4G28740.1 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: biological_process unknown; LOCATED IN:
           chloroplast; EXPRESSED IN: 21 plant structures;
           EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
           DOMAIN/s: Protein of unknown function DUF3493
           (InterPro:IPR021883); BEST Arabidopsis thaliana protein
           match is: tetratricopeptide repeat (TPR)-containing
           protein (TAIR:AT1G02910.1); Has 30201 Blast hits to
           17322 proteins in 780 species: Archae - 12; Bacteria -
           1396; Metazoa - 17338; Fungi - 3422; Plants - 5037;
           Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
           BLink). | chr4:14201051-14202542 FORWARD LENGTH=347
          Length = 347

 Score =  136 bits (342), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 86/277 (31%), Positives = 142/277 (51%), Gaps = 24/277 (8%)

Query: 205 DIGSSFRRDLKLISEVQAPFRGIRRFFYVALTAAAGVSLLLTIPRLFLAIKGGDDAPGLL 264
           D  S    D ++ SEV +PFR +R FFY+A  A+  +  L+   RL  A+     +  +L
Sbjct: 86  DEPSEISADARIRSEVLSPFRSVRMFFYLAFIASGSLGGLIATSRLIGALANPARSGEVL 145

Query: 265 ETSGNAAINIGGIVVFVALFFWDNKKEEEQLAQISRNETLSRLPLRL-STNRIVELVQLR 323
           E      ++IG   +F  L+F +NK +  Q+A++SR E L +L +R+   N+++ +  LR
Sbjct: 146 EIVKGLGVDIGAASLFAFLYFNENKTKNAQMARLSREENLGKLKMRVEENNKVISVGDLR 205

Query: 324 DTVRPVILAGTKETVSLALRKAERFRSELIKRGVLLVPVIWXXXXXXXXXXXXXXLSSKA 383
              R VI AG  E +  A ++++ +   L++RGV++V                      A
Sbjct: 206 GVARLVICAGPAEFIEEAFKRSKEYTQGLVERGVVVV----------------------A 243

Query: 384 AAEALPSIGEDFEKRTQSITAKSKLKAEVRFKAEVISPAEWERWIRDQQKAEGVTVGEDV 443
            A    S   +F++   +    S+ + ++     V  P EWE+W+ +Q+K   V+    V
Sbjct: 244 YATDGNSPVLEFDETDIADEEMSQRRKKLWRVTPVFVP-EWEKWLNEQKKLANVSSDSPV 302

Query: 444 YIILRLDGRVRRSGKGMPDWQKIVNELPPMEALLSKL 480
           Y+ LRLDGRVR SG G P WQ  V +LPP++ + + L
Sbjct: 303 YLSLRLDGRVRASGVGYPPWQAFVAQLPPVKGMWTGL 339


>AT1G55480.1 | Symbols: ZKT | protein containing PDZ domain, a K-box
           domain, and a TPR region | chr1:20713822-20715351
           FORWARD LENGTH=335
          Length = 335

 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 44/89 (49%)

Query: 107 LQSSLLFFWISQVKDALTQFETALSLNPNPVEAQAAFYNKACCHAYRGEGKKAAECLRTA 166
           L+  L F    + ++AL +FE+ L   P P EA  A YN ACC++   + +     L  A
Sbjct: 221 LREGLQFSKNGKYEEALERFESVLGSKPTPEEASVASYNVACCYSKLNQVQAGLSALEEA 280

Query: 167 LREYNLKFSTILNDPDLASFRALPEFKEL 195
           L+     F  I +DPDL + R   +F  L
Sbjct: 281 LKSGYEDFKRIRSDPDLETLRKSKDFDPL 309