Miyakogusa Predicted Gene

Lj1g3v4899060.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4899060.1 Non Chatacterized Hit- tr|I1NBY0|I1NBY0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.9498
PE=,50,3e-19,seg,NULL; RALF,Rapid ALkalinization Factor,CUFF.33546.1
         (125 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G02900.1 | Symbols: RALFL1, RALF1, ATRALF1 | rapid alkaliniza...   105   1e-23
AT4G15800.1 | Symbols: RALFL33 | ralf-like 33 | chr4:8984915-898...   103   3e-23
AT3G16570.1 | Symbols: RALF23, ATRALF23 | rapid alkalinization f...    96   5e-21
AT3G05490.1 | Symbols: RALFL22 | ralf-like 22 | chr3:1591381-159...    91   2e-19
AT2G33775.1 | Symbols: RALFL19 | ralf-like 19 | chr2:14288546-14...    74   2e-14
AT3G23805.1 | Symbols: RALFL24 | ralf-like 24 | chr3:8586467-858...    70   2e-13
AT4G13950.1 | Symbols: RALFL31 | ralf-like 31 | chr4:8058268-805...    69   7e-13
AT1G28270.1 | Symbols: RALFL4 | ralf-like 4 | chr1:9883165-98834...    68   2e-12
AT5G67070.1 | Symbols: RALFL34 | ralf-like 34 | chr5:26768120-26...    50   5e-07

>AT1G02900.1 | Symbols: RALFL1, RALF1, ATRALF1 | rapid
           alkalinization factor 1 | chr1:653976-654338 REVERSE
           LENGTH=120
          Length = 120

 Score =  105 bits (261), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 53/111 (47%), Positives = 70/111 (63%), Gaps = 5/111 (4%)

Query: 14  MVAMSIFSPSTASAIG-EHHQLWWVHMTTPPPPCQGSIEECIAASGEFGMESSEPESHRR 72
           +V   I SP   +    +   + W         C GSI ECI A      E  + E +RR
Sbjct: 14  LVVFIISSPPVQAGFANDLGGVAWATTGDNGSGCHGSIAECIGAE----EEEMDSEINRR 69

Query: 73  ILATSQYISYRALQRNTVPCSRKGASYYNCKGGAEANPYNRGCPTITRCRT 123
           ILAT++YISY++L+RN+VPCSR+GASYYNC+ GA+ANPY+RGC  I RCR+
Sbjct: 70  ILATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKIARCRS 120


>AT4G15800.1 | Symbols: RALFL33 | ralf-like 33 |
           chr4:8984915-8985265 FORWARD LENGTH=116
          Length = 116

 Score =  103 bits (257), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 5/79 (6%)

Query: 46  CQGSIEECIAASGE--FGMESSEPESHRRILATSQYISYRALQRNTVPCSRKGASYYNCK 103
           C G+I EC  ++ E  F M+S   E +RRILAT++YISY AL+RNTVPCSR+GASYYNC+
Sbjct: 40  CNGTIAECSLSTAEEEFEMDS---EINRRILATTKYISYGALRRNTVPCSRRGASYYNCR 96

Query: 104 GGAEANPYNRGCPTITRCR 122
            GA+ANPY+RGC  ITRCR
Sbjct: 97  RGAQANPYSRGCSAITRCR 115


>AT3G16570.1 | Symbols: RALF23, ATRALF23 | rapid alkalinization
           factor 23 | chr3:5644748-5645164 FORWARD LENGTH=138
          Length = 138

 Score = 96.3 bits (238), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 50/90 (55%), Positives = 62/90 (68%), Gaps = 13/90 (14%)

Query: 46  CQGSIEECI--AASGEFG-----------MESSEPESHRRILATSQYISYRALQRNTVPC 92
           C+G+I EC   AA G+ G               + E +RRILAT +YISY AL+RNT+PC
Sbjct: 47  CRGTIAECSVSAALGDGGDLFYGGGEMGEEFEMDSEINRRILATRRYISYGALRRNTIPC 106

Query: 93  SRKGASYYNCKGGAEANPYNRGCPTITRCR 122
           SR+GASYYNC+ GA+ANPY+RGC  ITRCR
Sbjct: 107 SRRGASYYNCRRGAQANPYSRGCSAITRCR 136


>AT3G05490.1 | Symbols: RALFL22 | ralf-like 22 |
           chr3:1591381-1591740 FORWARD LENGTH=119
          Length = 119

 Score = 90.9 bits (224), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 39/57 (68%), Positives = 49/57 (85%)

Query: 66  EPESHRRILATSQYISYRALQRNTVPCSRKGASYYNCKGGAEANPYNRGCPTITRCR 122
           + +  RRILA  +YISY A++RN+VPCSR+GASYYNC+ GA+ANPY+RGC TITRCR
Sbjct: 62  DSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTITRCR 118


>AT2G33775.1 | Symbols: RALFL19 | ralf-like 19 |
           chr2:14288546-14288878 FORWARD LENGTH=110
          Length = 110

 Score = 74.3 bits (181), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 34/69 (49%), Positives = 41/69 (59%)

Query: 53  CIAASGEFGMESSEPESHRRILATSQYISYRALQRNTVPCSRKGASYYNCKGGAEANPYN 112
           CI   GE         + R++ A   YISY AL++N VPCSR+G SYY+CK    ANPY 
Sbjct: 37  CIGEDGELDYLMDSETNRRQLAARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYR 96

Query: 113 RGCPTITRC 121
           RGC  IT C
Sbjct: 97  RGCSVITHC 105


>AT3G23805.1 | Symbols: RALFL24 | ralf-like 24 |
           chr3:8586467-8586823 FORWARD LENGTH=118
          Length = 118

 Score = 70.5 bits (171), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/90 (43%), Positives = 51/90 (56%), Gaps = 6/90 (6%)

Query: 37  VHMTTPPPPCQGSIEECIAASGEFGMESSEPE-----SHRRILATSQYISYRALQRNTVP 91
           + +T P P   G I+  +  +G  G E  E       S R ++   QYISY  L+R+ VP
Sbjct: 21  ISVTVPIPSVNGEIDAMLNRNGVIGEEEGEEMMPSEISRRVMMMRKQYISYETLRRDMVP 80

Query: 92  CSRKGASYYNCKGGAEANPYNRGCPTITRC 121
           C + GASYY C+ G +AN YNRGC  ITRC
Sbjct: 81  CQKPGASYYACRSG-QANAYNRGCSVITRC 109


>AT4G13950.1 | Symbols: RALFL31 | ralf-like 31 |
           chr4:8058268-8058609 REVERSE LENGTH=113
          Length = 113

 Score = 68.9 bits (167), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 41/102 (40%), Positives = 54/102 (52%), Gaps = 4/102 (3%)

Query: 23  STASAIGEHHQLWWVHMTTPPPPCQGSIEECIAASGEFGMESSE--PESHRRIL-ATSQY 79
           STA  I     L       P P   G I+  +  +   G +      E  RR+L A  +Y
Sbjct: 4   STALVIFAILFLLISADAFPIPSPNGEIDAMLIRNSIIGEDEDLMPTEISRRVLMAQKRY 63

Query: 80  ISYRALQRNTVPCSRKGASYYNCKGGAEANPYNRGCPTITRC 121
           I Y  L+R+ VPC + GASYY+C+ G +AN Y+RGC TITRC
Sbjct: 64  IGYETLRRDMVPCQKPGASYYDCRSG-QANSYSRGCDTITRC 104


>AT1G28270.1 | Symbols: RALFL4 | ralf-like 4 | chr1:9883165-9883497
           FORWARD LENGTH=110
          Length = 110

 Score = 67.8 bits (164), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/77 (45%), Positives = 45/77 (58%), Gaps = 6/77 (7%)

Query: 51  EECIAASGEFGMESS-----EPESHRRILATSQ-YISYRALQRNTVPCSRKGASYYNCKG 104
           + CI   G  G +       + E++RR LA  + YI Y AL++N VPCSR+G SYY+CK 
Sbjct: 29  KSCINGQGCIGEDDELESLMDSETNRRQLARGRRYIGYDALKKNNVPCSRRGRSYYDCKK 88

Query: 105 GAEANPYNRGCPTITRC 121
               NPY RGC  IT C
Sbjct: 89  RRRNNPYRRGCSAITHC 105


>AT5G67070.1 | Symbols: RALFL34 | ralf-like 34 |
           chr5:26768120-26768509 FORWARD LENGTH=129
          Length = 129

 Score = 49.7 bits (117), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/82 (43%), Positives = 44/82 (53%), Gaps = 10/82 (12%)

Query: 51  EECIAASGEFGMESSEPE---SHRRIL---ATSQYISYRALQRNTVPCS-RKGASYY--N 101
           +E     GE   E +E +   + RR L    T  YISY AL  N VPC  R G SYY  N
Sbjct: 47  DEFDIIDGEESFEVTEEDDGVTDRRSLYWRRTKYYISYGALSANRVPCPPRSGRSYYTHN 106

Query: 102 C-KGGAEANPYNRGCPTITRCR 122
           C +     +PY+RGC +ITRCR
Sbjct: 107 CFRARGPVHPYSRGCSSITRCR 128