Miyakogusa Predicted Gene

Lj1g3v4865390.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4865390.1 tr|I3SJE5|I3SJE5_LOTJA Ribosomal protein L19
OS=Lotus japonicus PE=2 SV=1,100,0,coiled-coil,NULL; seg,NULL;
Ribosomal protein L19 (L19e),Ribosomal protein L19/L19e; 60S RIBOSOMAL
P,CUFF.33513.1
         (212 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G02780.1 | Symbols: emb2386 | Ribosomal protein L19e family p...   317   3e-87
AT3G16780.1 | Symbols:  | Ribosomal protein L19e family protein ...   315   1e-86
AT4G02230.1 | Symbols:  | Ribosomal protein L19e family protein ...   314   2e-86
AT4G16030.1 | Symbols:  | Ribosomal protein L19e family protein ...    64   5e-11

>AT1G02780.1 | Symbols: emb2386 | Ribosomal protein L19e family
           protein | chr1:608120-609391 REVERSE LENGTH=214
          Length = 214

 Score =  317 bits (813), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 157/186 (84%), Positives = 169/186 (90%)

Query: 1   MVSLKLQKRLASSVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLA+SV+KCG+GKVWLDPNE ++ISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVMKCGKGKVWLDPNESSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMY 120
           SRAR+MK AK KGRHSGYGKRKGTREARLPTK+              KYRE+KKIDKHMY
Sbjct: 61  SRARKMKIAKMKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKTKAEKAREKTLSDQFEAKRAKNKASRERKNARREER 180
           HDMYM+VKGNVFKNKRVLMESIHK+KAEKAREKTLSDQFEAKRAKNKASRERK+ARREER
Sbjct: 121 HDMYMRVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPG 186
           LA+GPG
Sbjct: 181 LAKGPG 186


>AT3G16780.1 | Symbols:  | Ribosomal protein L19e family protein |
           chr3:5708982-5710249 FORWARD LENGTH=209
          Length = 209

 Score =  315 bits (808), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 157/186 (84%), Positives = 165/186 (88%)

Query: 1   MVSLKLQKRLASSVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLK+QKRLA+SV+KCG+GKVWLDPNE  +ISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKIQKRLAASVMKCGKGKVWLDPNESGDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMY 120
           SRAR + EAKRKGRHSGYGKRKGTREARLPTKI              KYRESKKID+HMY
Sbjct: 61  SRARALNEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRFLSKYRESKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKTKAEKAREKTLSDQFEAKRAKNKASRERKNARREER 180
           HDMYMKVKGNVFKNKRVLMESIHK KAEKAREKTL+DQFEAKR KNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKMKAEKAREKTLADQFEAKRIKNKASRERKFARREER 180

Query: 181 LAQGPG 186
           LAQGPG
Sbjct: 181 LAQGPG 186


>AT4G02230.1 | Symbols:  | Ribosomal protein L19e family protein |
           chr4:979391-980640 REVERSE LENGTH=208
          Length = 208

 Score =  314 bits (805), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 157/186 (84%), Positives = 168/186 (90%)

Query: 1   MVSLKLQKRLASSVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLASSVLKCG+ KVWLDPNE ++ISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLASSVLKCGKRKVWLDPNEGSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMY 120
           SRAR++  AKRKGRHSGYGKRKGTREARLPTK+              KYRE+KKID+HMY
Sbjct: 61  SRARQLNIAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKTKAEKAREKTLSDQFEAKRAKNKASRERKNARREER 180
           HDMYMKVKGNVFKNKRVLMESIHK+KAEKAREKTLSDQFEAKRAKNKASRERK+ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPG 186
           LA+GPG
Sbjct: 181 LAKGPG 186


>AT4G16030.1 | Symbols:  | Ribosomal protein L19e family protein |
           chr4:9083482-9084103 FORWARD LENGTH=114
          Length = 114

 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 54/130 (41%), Positives = 63/130 (48%), Gaps = 32/130 (24%)

Query: 57  IHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKID 116
            HSRSRARR      K RH+GYGK   T EA                    K+  +KKID
Sbjct: 6   FHSRSRARR------KCRHTGYGK--DTMEALRRIMKRLTRRLKMLKRLLKKFCWNKKID 57

Query: 117 KHMY-HDMYMKVKGNVFKNKRVLMESIHKTKAEKAREKTLSDQFEAKRAKNKASRERKNA 175
           K +Y HDM+MKVKG V+KNK VLMES+HK+                       SRERK +
Sbjct: 58  KLVYYHDMFMKVKGKVYKNKCVLMESMHKS-----------------------SRERKFS 94

Query: 176 RREERLAQGP 185
             E RLA  P
Sbjct: 95  GSEMRLALEP 104