Miyakogusa Predicted Gene

Lj1g3v4863140.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4863140.1 tr|A9SS49|A9SS49_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_233966,32.38,5e-19,seg,NULL; Di19,Drought induced 19/
RING finger protein 114; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAM,CUFF.33487.1
         (231 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G05700.1 | Symbols:  | Drought-responsive family protein | ch...   124   8e-29
AT4G02200.1 | Symbols:  | Drought-responsive family protein | ch...   122   2e-28
AT4G02200.3 | Symbols:  | Drought-responsive family protein | ch...   117   9e-27
AT4G02200.2 | Symbols:  | Drought-responsive family protein | ch...   114   4e-26
AT5G49230.1 | Symbols: HRB1 | Drought-responsive family protein ...   113   1e-25
AT3G06760.1 | Symbols:  | Drought-responsive family protein | ch...   111   4e-25
AT5G26990.1 | Symbols:  | Drought-responsive family protein | ch...   110   1e-24
AT1G02750.1 | Symbols:  | Drought-responsive family protein | ch...   104   6e-23
AT1G02750.2 | Symbols:  | Drought-responsive family protein | ch...    79   2e-15
AT1G56280.1 | Symbols: ATDI19, DI19 | drought-induced 19 | chr1:...    78   4e-15
AT1G56280.2 | Symbols:  | drought-induced 19 | chr1:21073366-210...    76   2e-14
AT3G06760.2 | Symbols:  | Drought-responsive family protein | ch...    75   5e-14

>AT3G05700.1 | Symbols:  | Drought-responsive family protein |
           chr3:1682432-1684323 REVERSE LENGTH=223
          Length = 223

 Score =  124 bits (310), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 75/186 (40%), Positives = 103/186 (55%), Gaps = 5/186 (2%)

Query: 49  LRTAYPCPFCEEDFDLLELCCHIDLDHQIEAKSGVQLCPVCAVWIGANMVEHIAAQHGNI 108
            R  + CPFC + FD++ LCCHID DH +EAK+GV  CPVCAV +G +MV HI  QH NI
Sbjct: 40  FREEFACPFCSDYFDIVSLCCHIDEDHPMEAKNGV--CPVCAVRVGVDMVAHITLQHANI 97

Query: 109 FKSQLKSKRHQHDSYPTLSFSRKDEEDRHWESFYAG---SSPVTSTSETARDPLLSFLCG 165
           FK   K K  +  SY TLS  R++  D +++S + G       +S+S  A DPLLS    
Sbjct: 98  FKMHRKRKPRRGGSYSTLSILRREFPDGNFQSLFGGSSCIVSSSSSSNVAADPLLSSFIS 157

Query: 166 AAAAGEHQNVQPDSSSELSIEETHSDDTVLERDVEPSLPDKDRIEKARRSKFVQGLLMST 225
             A G        S+    +++T       +   + SL  +D  +K +RS+FV+ LL ST
Sbjct: 158 PIADGFFTTESCISAETGPVKKTTIQCLPEQNAKKTSLSAEDHKQKLKRSEFVRELLSST 217

Query: 226 FLDPDL 231
            LD  L
Sbjct: 218 ILDDSL 223


>AT4G02200.1 | Symbols:  | Drought-responsive family protein |
           chr4:972776-974203 FORWARD LENGTH=214
          Length = 214

 Score =  122 bits (306), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/178 (39%), Positives = 107/178 (60%), Gaps = 13/178 (7%)

Query: 53  YPCPFCEEDFDLLELCCHIDLDHQIEAKSGVQLCPVCAVWIGANMVEHIAAQHGNIFKSQ 112
           YPCPFC +D+DL+ELC HID +HQ++A +G+  CPVC+  +  +MV+HI  QH ++FK  
Sbjct: 43  YPCPFCSDDYDLVELCHHIDEEHQLDANNGI--CPVCSRRVKMHMVDHITTQHRDVFK-- 98

Query: 113 LKSKRHQHDSYPTLSFSRKDEEDRHWESFYAGSSPVTSTSETARDPLLSFLCGAAAAGEH 172
              + ++ +SY   S   +    ++ +S          TS++  DPLLSF+    +  + 
Sbjct: 99  ---RLYKDESYSAFSPGTR----KYLQSLIDEPLSTNHTSKSVLDPLLSFIYNPPSPKKS 151

Query: 173 QNVQPDSSSELSIEETHSDDTVLERDVE-PS-LPDKDRIEKARRSKFVQGLLMSTFLD 228
           + VQPDSSSE S+E+        E+D E PS L D + +EKA++ +FVQGL+ S   D
Sbjct: 152 KLVQPDSSSEASMEDNSLIRDSTEKDWESPSPLSDTELLEKAKKREFVQGLISSAIFD 209


>AT4G02200.3 | Symbols:  | Drought-responsive family protein |
           chr4:972776-974203 FORWARD LENGTH=228
          Length = 228

 Score =  117 bits (292), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 70/190 (36%), Positives = 107/190 (56%), Gaps = 23/190 (12%)

Query: 53  YPCPFCEEDFDLLELCCHIDLDHQIEAKSGVQ------------LCPVCAVWIGANMVEH 100
           YPCPFC +D+DL+ELC HID +HQ++A +G              +CPVC+  +  +MV+H
Sbjct: 43  YPCPFCSDDYDLVELCHHIDEEHQLDANNGFLHEAVSCKFRLFIICPVCSRRVKMHMVDH 102

Query: 101 IAAQHGNIFKSQLKSKRHQHDSYPTLSFSRKDEEDRHWESFYAGSSPVTSTSETARDPLL 160
           I  QH ++FK     + ++ +SY   S   +    ++ +S          TS++  DPLL
Sbjct: 103 ITTQHRDVFK-----RLYKDESYSAFSPGTR----KYLQSLIDEPLSTNHTSKSVLDPLL 153

Query: 161 SFLCGAAAAGEHQNVQPDSSSELSIEETHSDDTVLERDVE-PS-LPDKDRIEKARRSKFV 218
           SF+    +  + + VQPDSSSE S+E+        E+D E PS L D + +EKA++ +FV
Sbjct: 154 SFIYNPPSPKKSKLVQPDSSSEASMEDNSLIRDSTEKDWESPSPLSDTELLEKAKKREFV 213

Query: 219 QGLLMSTFLD 228
           QGL+ S   D
Sbjct: 214 QGLISSAIFD 223


>AT4G02200.2 | Symbols:  | Drought-responsive family protein |
           chr4:972776-974332 FORWARD LENGTH=207
          Length = 207

 Score =  114 bits (286), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 66/170 (38%), Positives = 102/170 (60%), Gaps = 13/170 (7%)

Query: 53  YPCPFCEEDFDLLELCCHIDLDHQIEAKSGVQLCPVCAVWIGANMVEHIAAQHGNIFKSQ 112
           YPCPFC +D+DL+ELC HID +HQ++A +G+  CPVC+  +  +MV+HI  QH ++FK  
Sbjct: 43  YPCPFCSDDYDLVELCHHIDEEHQLDANNGI--CPVCSRRVKMHMVDHITTQHRDVFK-- 98

Query: 113 LKSKRHQHDSYPTLSFSRKDEEDRHWESFYAGSSPVTSTSETARDPLLSFLCGAAAAGEH 172
              + ++ +SY   S   +    ++ +S          TS++  DPLLSF+    +  + 
Sbjct: 99  ---RLYKDESYSAFSPGTR----KYLQSLIDEPLSTNHTSKSVLDPLLSFIYNPPSPKKS 151

Query: 173 QNVQPDSSSELSIEETHSDDTVLERDVE-PS-LPDKDRIEKARRSKFVQG 220
           + VQPDSSSE S+E+        E+D E PS L D + +EKA++ +FVQ 
Sbjct: 152 KLVQPDSSSEASMEDNSLIRDSTEKDWESPSPLSDTELLEKAKKREFVQA 201


>AT5G49230.1 | Symbols: HRB1 | Drought-responsive family protein |
           chr5:19959048-19960422 REVERSE LENGTH=211
          Length = 211

 Score =  113 bits (282), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 68/181 (37%), Positives = 103/181 (56%), Gaps = 12/181 (6%)

Query: 49  LRTAYPCPFCEEDFDLLELCCHIDLDHQIEAKSGVQLCPVCAVWIGANMVEHIAAQHGNI 108
           L+  + CPFC ++FD++ LCCHID++H +EAK+GV  CPVC   +G ++V HI  QHGN+
Sbjct: 39  LKAEFMCPFCADEFDIVGLCCHIDVNHPVEAKNGV--CPVCTKKVGLDIVGHITTQHGNV 96

Query: 109 FKSQLKSKRHQHDSYPTLSFSRKDEEDRHWESFYAGSSPVTSTSETARDPLL-SFLCGAA 167
           FK Q + +R +   Y +   + K E          GSS    +S    DPLL SF+    
Sbjct: 97  FKVQ-RRRRLRKGGYSSTYLTLKKELREANLQSLGGSSTFIPSSNIDSDPLLSSFMFKPP 155

Query: 168 AAGEHQNVQPDSSSELSIEETHSDDTVLERDVEPSLPDKDRIEKARRSKFVQGLLMSTFL 227
           +A       P +  + S+ +    DT   +  + S  ++D+ EKA++SKFV+GLL ST L
Sbjct: 156 SA------IPITEGD-SVAQVSPKDTSKSKIQQESFSNEDQ-EKAKKSKFVRGLLWSTML 207

Query: 228 D 228
           +
Sbjct: 208 E 208


>AT3G06760.1 | Symbols:  | Drought-responsive family protein |
           chr3:2132971-2134355 FORWARD LENGTH=224
          Length = 224

 Score =  111 bits (278), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 69/190 (36%), Positives = 112/190 (58%), Gaps = 15/190 (7%)

Query: 49  LRTAYPCPFCEEDFDLLELCCHIDLDHQIEAKSGVQLCPVCAVWIGANMVEHIAAQHGNI 108
           L+  + CPFC EDFD++ LCCHID +H +EAK+GV  CPVC   +G ++V HI  QH N 
Sbjct: 43  LKAEFICPFCAEDFDIVGLCCHIDEEHPVEAKNGV--CPVCTKRVGLDIVGHITTQHANF 100

Query: 109 FKSQLKSKRHQHDSYPTLSFSRKDEEDRHWESFYAGSSPVTSTSETARDPLL-SFLCGAA 167
           FK Q + +  +     T    +K+  + + +S   GSS  TS++    DPLL SF+  + 
Sbjct: 101 FKVQRRRRLRRGGYSSTYLALKKELREANLQSLLGGSSSFTSSTNIDSDPLLSSFMFNSP 160

Query: 168 AAGEHQN------VQPDSSSELSIEETHSDDTVLERDVEPSLPDKDRIEKARRSKFVQGL 221
           +  +  N         ++++++SI+E+      L+RD++ +    +  EKA++S+FV+GL
Sbjct: 161 SVNQSANKSATPVTVGNAATKVSIKES------LKRDIQEAPLSGEDQEKAKKSEFVRGL 214

Query: 222 LMSTFLDPDL 231
           L+ST L+ D 
Sbjct: 215 LLSTMLEDDF 224


>AT5G26990.1 | Symbols:  | Drought-responsive family protein |
           chr5:9491366-9493639 FORWARD LENGTH=222
          Length = 222

 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 69/190 (36%), Positives = 109/190 (57%), Gaps = 14/190 (7%)

Query: 49  LRTAYPCPFCEEDFDLLELCCHIDLDHQIEAKSGVQLCPVCAVWIGANMVEHIAAQHGNI 108
            R  Y CPFC + FD++ LCCHID DH ++AK+GV  CP+CAV + ++M+ HI  QH N+
Sbjct: 40  FREEYACPFCSDYFDIVSLCCHIDEDHPMDAKNGV--CPICAVKVSSDMIAHITLQHANM 97

Query: 109 FKSQLKSKRHQHDSYPTLSFSRKDEEDRHWESFYAGS--SPVTSTSETARDPLLSFLCGA 166
           FK   K K  +  +   LS  +++  D +++S + G+  +  +S++  A DPLLS     
Sbjct: 98  FKVTRKRKSRRGGAQSMLSILKREFPDGNFQSLFEGTSRAVSSSSASIAADPLLSSFISP 157

Query: 167 AA----AGEHQNVQPDSSSELSIEETHSDDTVLERDVEP-SLPDKDRIEKARRSKFVQGL 221
            A      E       SS++ ++ +     ++ ER+VE  SL  +D  EK ++S+FVQG+
Sbjct: 158 MADDFFISESSLCADTSSAKKTLNQ-----SLPERNVEKQSLSAEDHREKLKQSEFVQGI 212

Query: 222 LMSTFLDPDL 231
           L S  L+  L
Sbjct: 213 LSSMILEDGL 222


>AT1G02750.1 | Symbols:  | Drought-responsive family protein |
           chr1:602673-604134 FORWARD LENGTH=221
          Length = 221

 Score =  104 bits (259), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 99/182 (54%), Gaps = 12/182 (6%)

Query: 49  LRTAYPCPFCEEDFDLLELCCHIDLDHQIEAKSGVQLCPVCAVWIGANMVEHIAAQHGNI 108
           +   YPCPFC  D+DL+ELC HID +H+ EA +G+  CPVC+  +  +MV+HI + H ++
Sbjct: 43  IAVEYPCPFCASDYDLVELCHHIDEEHRHEANNGI--CPVCSKRVKMHMVDHITSHHRDV 100

Query: 109 FKSQLKSKRHQHDSYPTLSFSRKDEEDRHWESFYAGSSPVTSTSETARDPLLSFLCGAAA 168
            KS+ K   ++ D Y +  + +      H +      +     S+   D  LSF+  +A 
Sbjct: 101 LKSEQKEMSYREDPYLSDKYLQP-----HLDELPPSMNHHQHPSKHVSDQFLSFINNSAL 155

Query: 169 AGEHQNVQPDSSSELSIEETHSDDTVLERDVEPSLP--DKDRIEKARRSKFVQGLLMSTF 226
             + + V PDSS E   ++    D+   ++   S P  D D++EKA++ +FVQGLL S  
Sbjct: 156 PNQTKLVLPDSSVE---DKNPIKDSSAAKEGTSSCPLSDSDKLEKAKKCEFVQGLLSSAM 212

Query: 227 LD 228
            D
Sbjct: 213 FD 214


>AT1G02750.2 | Symbols:  | Drought-responsive family protein |
           chr1:602673-604134 FORWARD LENGTH=205
          Length = 205

 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 88/182 (48%), Gaps = 28/182 (15%)

Query: 49  LRTAYPCPFCEEDFDLLELCCHIDLDHQIEAKSGVQLCPVCAVWIGANMVEHIAAQHGNI 108
           +   YPCPFC  D+DL+ELC HID +H+ EA +G+  CPVC+  +               
Sbjct: 43  IAVEYPCPFCASDYDLVELCHHIDEEHRHEANNGI--CPVCSKRV--------------- 85

Query: 109 FKSQLKSKRHQHDSYPTLSFSRKDEEDRHWESFYAGSSPVTSTSETARDPLLSFLCGAAA 168
            K  +K   ++ D Y +  + +      H +      +     S+   D  LSF+  +A 
Sbjct: 86  -KMHMKEMSYREDPYLSDKYLQP-----HLDELPPSMNHHQHPSKHVSDQFLSFINNSAL 139

Query: 169 AGEHQNVQPDSSSELSIEETHSDDTVLERDVEPSLP--DKDRIEKARRSKFVQGLLMSTF 226
             + + V PDSS E   ++    D+   ++   S P  D D++EKA++ +FVQGLL S  
Sbjct: 140 PNQTKLVLPDSSVE---DKNPIKDSSAAKEGTSSCPLSDSDKLEKAKKCEFVQGLLSSAM 196

Query: 227 LD 228
            D
Sbjct: 197 FD 198


>AT1G56280.1 | Symbols: ATDI19, DI19 | drought-induced 19 |
           chr1:21073366-21074725 REVERSE LENGTH=200
          Length = 200

 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 86/181 (47%), Gaps = 22/181 (12%)

Query: 53  YPCPFCEEDFDLLELCCHIDLDHQIEAKSGVQLCPVCAVWIGANMVEHIAAQHGNIFKSQ 112
           + CPFC E +D++ LCCHID +H +E+K+ V  CPVC++ +G ++V H     G      
Sbjct: 35  FACPFCAESYDIIGLCCHIDDEHTLESKNAV--CPVCSLKVGVDIVAHKRFTMGR----- 87

Query: 113 LKSKRHQHDSYPTLSFSRKDEEDRHWESFYAGSSPVTST-SETARDPLLSFLCGAAAAGE 171
            K K  +  +  TLS  RK+  +   +     +S   S  S    DPLLS          
Sbjct: 88  -KRKSRKSGTNSTLSLLRKELREGDLQRLLGFTSRNGSVASSVTPDPLLSSFISPT---- 142

Query: 172 HQNVQPDSSSELSIEETHSDDTVLERD----VEPSLPDKDRIEKARRSKFVQGLLMSTFL 227
               +  SS      +  S+D  +ER     + P +  KDR E+  +S+FVQ LL S   
Sbjct: 143 ----RSQSSPAPRQTKNVSEDKQIERKRQVFISP-VSLKDREERRHKSEFVQRLLSSAIF 197

Query: 228 D 228
           D
Sbjct: 198 D 198


>AT1G56280.2 | Symbols:  | drought-induced 19 |
           chr1:21073366-21074725 REVERSE LENGTH=199
          Length = 199

 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 86/181 (47%), Gaps = 23/181 (12%)

Query: 53  YPCPFCEEDFDLLELCCHIDLDHQIEAKSGVQLCPVCAVWIGANMVEHIAAQHGNIFKSQ 112
           + CPFC E +D++ LCCHID +H +E+K+   +CPVC++ +G ++V H     G      
Sbjct: 35  FACPFCAESYDIIGLCCHIDDEHTLESKN---VCPVCSLKVGVDIVAHKRFTMGR----- 86

Query: 113 LKSKRHQHDSYPTLSFSRKDEEDRHWESFYAGSSPVTST-SETARDPLLSFLCGAAAAGE 171
            K K  +  +  TLS  RK+  +   +     +S   S  S    DPLLS          
Sbjct: 87  -KRKSRKSGTNSTLSLLRKELREGDLQRLLGFTSRNGSVASSVTPDPLLSSFISPT---- 141

Query: 172 HQNVQPDSSSELSIEETHSDDTVLERD----VEPSLPDKDRIEKARRSKFVQGLLMSTFL 227
               +  SS      +  S+D  +ER     + P +  KDR E+  +S+FVQ LL S   
Sbjct: 142 ----RSQSSPAPRQTKNVSEDKQIERKRQVFISP-VSLKDREERRHKSEFVQRLLSSAIF 196

Query: 228 D 228
           D
Sbjct: 197 D 197


>AT3G06760.2 | Symbols:  | Drought-responsive family protein |
           chr3:2132971-2134355 FORWARD LENGTH=234
          Length = 234

 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 104/198 (52%), Gaps = 21/198 (10%)

Query: 49  LRTAYPCPFCEEDFDLLELCCHIDLDHQIEAKSGVQ------LCPVCAVW-IGANMVEHI 101
           L+  + CPFC EDFD++ LCCHID +H +EAK+GV       +   C  W I       I
Sbjct: 43  LKAEFICPFCAEDFDIVGLCCHIDEEHPVEAKNGVDQFFALVVIQCCNFWFIPCESNLGI 102

Query: 102 AAQHGNIFKSQLKSKRHQHDSYPTLSFSRKDE-EDRHWESFYAGSSPVTSTSETARDPLL 160
               G      L+ +R +   Y +   + K E  + + +S   GSS  TS++    DPLL
Sbjct: 103 FRLFGRSVLYALRGRRLRRGGYSSTYLALKKELREANLQSLLGGSSSFTSSTNIDSDPLL 162

Query: 161 -SFLCGAAAAGEHQN------VQPDSSSELSIEETHSDDTVLERDVEPSLPDKDRIEKAR 213
            SF+  + +  +  N         ++++++SI+E+      L+RD++ +    +  EKA+
Sbjct: 163 SSFMFNSPSVNQSANKSATPVTVGNAATKVSIKES------LKRDIQEAPLSGEDQEKAK 216

Query: 214 RSKFVQGLLMSTFLDPDL 231
           +S+FV+GLL+ST L+ D 
Sbjct: 217 KSEFVRGLLLSTMLEDDF 234