Miyakogusa Predicted Gene

Lj1g3v4863070.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4863070.1 Non Chatacterized Hit- tr|G7L9V5|G7L9V5_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,51.52,2e-18,
,gene.g37606.t1.1
         (236 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G02700.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   180   7e-46

>AT1G02700.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: mitochondrion;
           BEST Arabidopsis thaliana protein match is: unknown
           protein (TAIR:AT4G02140.1); Has 49 Blast hits to 49
           proteins in 21 species: Archae - 0; Bacteria - 0;
           Metazoa - 10; Fungi - 6; Plants - 29; Viruses - 0; Other
           Eukaryotes - 4 (source: NCBI BLink). |
           chr1:588367-589232 FORWARD LENGTH=247
          Length = 247

 Score =  180 bits (457), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 110/254 (43%), Positives = 145/254 (57%), Gaps = 27/254 (10%)

Query: 1   MQSRVLTNTATTWCRALSSTTNRFTLSRGFSAANRSRTADPAIHSGELESGPDVNKETAR 60
           MQSR+L   +    R       R      F ++   RTADP IH+G   + P +      
Sbjct: 3   MQSRLLAFASAARSRVRPIAQRRL----AFGSSTSGRTADPEIHAGNDGADPAIYPRDPE 58

Query: 61  GTTSTNDDGTNVK-----FVETEHMPSKED----TLKSPLDASQKLKSEGVNQRLDPSMQ 111
           G     DD  N K      V+    PS E+      KSP   + KL+S  V    +P  Q
Sbjct: 59  GM----DDVANPKTAAEEIVDDTPRPSLEEQPLVPPKSPRATAHKLESTPVGHPSEPHFQ 114

Query: 112 QKRKNGS---KVLEEVSCAGLDGSPWPEGEENI-----REEQNKDAKEYFRHHKASPLSE 163
           QKRKN +     L+ VSCAGLDGSPWP  E  +     RE++ +  +E+++HHKASPLSE
Sbjct: 115 QKRKNSTASPPSLDSVSCAGLDGSPWPRDEGEVEEQRRREDETESDQEFYKHHKASPLSE 174

Query: 164 LEFVDSRKPVSRVKDGTVDSGRGVEVIGWLPEQQDTAEDSLMRAAEIWRRNAMRGDPDA- 222
           +EF D+RKP+++  DGT     G +VIGWLPEQ DTAE+SLM+A  I++RNA RGDP+  
Sbjct: 175 IEFADTRKPITQATDGTAYPA-GKDVIGWLPEQLDTAEESLMKATMIFKRNAERGDPETF 233

Query: 223 PHSRVLRALRGEEF 236
           PHSR+LR +RGE F
Sbjct: 234 PHSRILREMRGEWF 247