Miyakogusa Predicted Gene
- Lj1g3v4863000.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4863000.1 CUFF.33493.1
(572 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G47440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 655 0.0
AT4G02100.1 | Symbols: | Heat shock protein DnaJ with tetratric... 648 0.0
AT3G62570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 578 e-165
AT1G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 509 e-144
AT5G12430.1 | Symbols: TPR16 | Heat shock protein DnaJ with tetr... 87 3e-17
AT2G41520.1 | Symbols: TPR15 | Heat shock protein DnaJ with tetr... 73 6e-13
AT2G41520.2 | Symbols: TPR15 | Heat shock protein DnaJ with tetr... 68 2e-11
>AT2G47440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:19469912-19471660 FORWARD
LENGTH=526
Length = 526
Score = 655 bits (1690), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/563 (59%), Positives = 405/563 (71%), Gaps = 48/563 (8%)
Query: 12 EKKHWWLTNRKIVEKYIKDARSLIATQEQSEIXXXXXXXXXXXXISPRLDQALELRARSL 71
+KKHWW T+RK+V+KYIKDA +L+A++E +++ ISPRL+ ALEL+ARSL
Sbjct: 10 DKKHWWFTHRKLVDKYIKDATTLMASEEANDVASALHLLDAALSISPRLETALELKARSL 69
Query: 72 LYLRRFKEVADMLQDYIPSLRMANEDPVXXXXXXXXXXXXXXREGVKLLS--SSPDSPVR 129
L+LRRFK+VADMLQDYIPSL++ +E +G+ LLS SSP S
Sbjct: 70 LFLRRFKDVADMLQDYIPSLKLDDE-------GSASSQGSSSSDGINLLSDASSPGS--- 119
Query: 130 YQSFKCFSVSDLKKKVMAGLCKSCEKEGQWRYLVLGEACCHLGLMEDAMVLLQTGKRLAS 189
FKCFSVSDLKKKVMAG+CK C+KEGQWRY+VLG+ACCHLGLMEDAMVLLQTGKRLAS
Sbjct: 120 ---FKCFSVSDLKKKVMAGICKKCDKEGQWRYVVLGQACCHLGLMEDAMVLLQTGKRLAS 176
Query: 190 AAFRRESVCWSDDSFSLSGIPFAGDATNXXXXXXXXXXLTDSTESVTQLLTHIKFXXXXX 249
A FRR S+CWSDDS +E+ T LL HIK
Sbjct: 177 AEFRRRSICWSDDS------------FLLLSESSSASSPPPESENFTHLLAHIKLLLRRR 224
Query: 250 XXXXXXXDAGLYPEAIRHFSKIVDGRRAAPQGFLAECYMHRASAHRSAGRIAESIADCNR 309
DAGL+ E+IRHFSKIVDGRR APQGFLAECYMHRA+A+RSAGRIAE+IADCN+
Sbjct: 225 AAAIAALDAGLFSESIRHFSKIVDGRRPAPQGFLAECYMHRAAAYRSAGRIAEAIADCNK 284
Query: 310 TLALDPTCIQALETRASLFETIRCLPDSLHDLEHLKLLYNSILRDRKLPGPAWKRHNVRY 369
TLAL+P+CIQALETRA+L ET+RC PDSLHDLEHLKLLYN+ILRDRKLPGP WKRHNV+Y
Sbjct: 285 TLALEPSCIQALETRAALLETVRCFPDSLHDLEHLKLLYNTILRDRKLPGPVWKRHNVKY 344
Query: 370 REIPGKLCTLTAKSQELKQRLASGETSSVDYYALIGVRRGCSRSELERAHLLLCLRHKPD 429
REIPGKLC LT K+Q+LKQ++A+GET +VDYY LIGVRRGC+RSEL+RAHLLLCLR+KPD
Sbjct: 345 REIPGKLCVLTTKTQKLKQKIANGETGNVDYYGLIGVRRGCTRSELDRAHLLLCLRYKPD 404
Query: 430 RATSFIDRCELADERDVDSVKERAKMSALLLYRLVQKGYTSVMGTILDXXXXXXXXXXXX 489
RA+SFI+RCE D+ DVDSV++RAKMS+LLLYRL+QKGYT+V I +
Sbjct: 405 RASSFIERCEFTDQNDVDSVRDRAKMSSLLLYRLIQKGYTAVTAIIAE------------ 452
Query: 490 XXXXXXXXXXXXXXXXSHEPEMNKPDSRSCNVVEDKSTLVSSSTVNPAVFQGVFCRDLAV 549
+ + E KP +S ++ ++ + VN +QGVFCRDLA
Sbjct: 453 -------EQRKNAIAHAQKIEERKPVEKSGSI--KRTGNAETKPVNSNAYQGVFCRDLAA 503
Query: 550 VGNLLSQARFNQPIPVKYEALSC 572
VGNLL++A FN PIPVKYEAL+C
Sbjct: 504 VGNLLTRAGFNHPIPVKYEALTC 526
>AT4G02100.1 | Symbols: | Heat shock protein DnaJ with
tetratricopeptide repeat | chr4:930228-932049 FORWARD
LENGTH=546
Length = 546
Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/566 (58%), Positives = 400/566 (70%), Gaps = 30/566 (5%)
Query: 12 EKKHWWLTNRKIVEKYIKDARSLIATQEQSEIXXXXXXXXXXXXISPRLDQALELRARSL 71
EKKHWWL N+KIV+KY+K+A+SLIA+Q+ +++ +SPR + ALEL+ARSL
Sbjct: 6 EKKHWWLRNKKIVDKYMKEAKSLIASQDPNDVKSALNLLESALSVSPRYELALELKARSL 65
Query: 72 LYLRRFKEVADMLQDYIPSLRMANEDPVXXXXXXXXXXXXXXREGVKLLSSSPDSPVRYQ 131
LYLRR+K+VADMLQDYIPSL++A RE VKLL+ P +
Sbjct: 66 LYLRRYKDVADMLQDYIPSLKLAGGGEDSGIGSSELSFTHSSRESVKLLNDLPSHHHHHD 125
Query: 132 S-FKCFSVSDLKKKVMAGLCKSCEKEGQWRYLVLGEACCHLGLMEDAMVLLQTGKRLASA 190
S FKCFSVSDLKKKVMAGL K+C+++GQWRYLVLG+ACCHLGLMEDAMVLLQTGKRLA+A
Sbjct: 126 SSFKCFSVSDLKKKVMAGLTKNCDEQGQWRYLVLGQACCHLGLMEDAMVLLQTGKRLATA 185
Query: 191 AFRRESVCWSDDSFSLSGIPFAGDATNXXXXXXXXXXLTDSTESVTQLLTHIKFXXXXXX 250
AFRR+S+CWSDDSF L G + +ES+ +L+HIK
Sbjct: 186 AFRRQSICWSDDSFILFSSEDGGSSPPSSVVVTSAS--QPRSESIAHVLSHIKLLLRRRA 243
Query: 251 XXXXXXDAGLYPEAIRHFSKIVDGRRAAPQGFLAECYMHRASAHRSAGRIAESIADCNRT 310
DAGLY E+IRHFSKI+D RR APQGFLA+C+MHRASA+RSAGRIAESIADCN+T
Sbjct: 244 AALAALDAGLYTESIRHFSKILDSRRGAPQGFLAQCFMHRASAYRSAGRIAESIADCNKT 303
Query: 311 LALDPTCIQALETRASLFETIRCLPDSLHDLEHLKLLYNSILRDRKLPGPAWKRHNVRYR 370
LALDP+C+QALETRA+L E++RC PDSLHDLEHLKLLYNSILRDRKLPGP WKRHNVRYR
Sbjct: 304 LALDPSCLQALETRAALLESVRCFPDSLHDLEHLKLLYNSILRDRKLPGPVWKRHNVRYR 363
Query: 371 EIPGKLCTLTAKSQELKQRLASGETSSVDYYALIGVRRGCSRSELERAHLLLCLRHKPDR 430
EIPGKLC LT K Q+LKQ++A+GE +VDYYAL+G+RR CSRSEL+RA+LLL L+HKP+R
Sbjct: 364 EIPGKLCVLTTKIQQLKQKIANGEIGNVDYYALMGIRRDCSRSELDRAYLLLNLKHKPER 423
Query: 431 ATSFIDRCELA-DERDVDSVKERAKMSALLLYRLVQKGYTSVMGTILDXXXXXXXXXXXX 489
+ SFIDR EL DE ++DSVK+RA+MS LLLYRL+QKGY+ V I
Sbjct: 424 SMSFIDRFELTDDEEELDSVKDRARMSTLLLYRLIQKGYSVVTSNIAAVEKQRKAIAAAV 483
Query: 490 XXXXXXXXXXXXXXXXSHEPEMNKPDSRSCNVVEDKSTLVS---SSTVNPAVFQGVFCRD 546
+S N++E V+ +S N V +GVFCRD
Sbjct: 484 AT-----------------------ESHRSNIIETPIRAVAVAVNSNNNTNVVKGVFCRD 520
Query: 547 LAVVGNLLSQARFNQPIPVKYEALSC 572
L VVG+L+++ FNQPIPVKYEALSC
Sbjct: 521 LTVVGSLIARTGFNQPIPVKYEALSC 546
>AT3G62570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23142616-23144563 FORWARD
LENGTH=552
Length = 552
Score = 578 bits (1490), Expect = e-165, Method: Compositional matrix adjust.
Identities = 310/577 (53%), Positives = 402/577 (69%), Gaps = 30/577 (5%)
Query: 1 MAVTAHSLSATEKKHWWLTNRKIVEKYIKDARSLIATQEQSEIXXXXXXXXXXXXISPRL 60
MA+ +S+ +KKHWW T++KIV+KYIKDARSL+ ++EQ+++ ISPR
Sbjct: 1 MAI--YSVHNGDKKHWWFTHKKIVDKYIKDARSLMESEEQNDVASAIHLLDAALSISPRS 58
Query: 61 DQALELRARSLLYLRRFKEVADMLQDYIPSLRMA-NEDPVXXXXXXXXXXXXXXREGVKL 119
+ ALEL+ARSLL+LRRFK+V DMLQDYIPSL++A NE+ +
Sbjct: 59 ETALELKARSLLFLRRFKDVVDMLQDYIPSLKLAVNEE--DGSYSYEGSSYSSSSSQLSR 116
Query: 120 LSSSPDSPVRYQSFKCFSVSDLKKKVMAGLCKSCEKEGQWRYLVLGEACCHLGLMEDAMV 179
S SP R SFKCFSVS LKKK+MAG+CK+ +++ QWRY+VLG+ACCHLGLMEDA+V
Sbjct: 117 KLLSDSSPRRDSSFKCFSVSYLKKKIMAGICKNRDQDKQWRYVVLGQACCHLGLMEDALV 176
Query: 180 LLQTGKRLASAAFRRESVCWSDDSFSLSGIPFAGDATNXXXXXXXXXXLTDSTESVTQLL 239
LLQTGKRLA+ FRR SV SDDS SL + +++ E+VT LL
Sbjct: 177 LLQTGKRLATVEFRRLSVSLSDDSVSLLLSESSSSSSSSSYAFPPRK--VSECETVTNLL 234
Query: 240 THIKFXXXXXXXXXXXXDAGLYPEAIRHFSKIVDGRR-AAPQGFLAECYMHRASAHRSAG 298
H K DAGL+ ++IRHFSKI+DGRR APQGFLA+CYMHRA+A++SAG
Sbjct: 235 AHTKNLLRRRSAGFAAFDAGLFADSIRHFSKILDGRRRPAPQGFLADCYMHRAAAYKSAG 294
Query: 299 RIAESIADCNRTLALDPTCIQALETRASLFETIRCLPDSLHDLEHLKLLYNSILRDRKLP 358
+IAE+IADCN+TLAL+P+CI ALETRA+L ET+RCLPDSLHDLEHLK+LYN+ILRDRKLP
Sbjct: 295 KIAEAIADCNKTLALEPSCIHALETRATLLETVRCLPDSLHDLEHLKILYNTILRDRKLP 354
Query: 359 GPAWKRHNVRYREIPGKLCTLTAKSQELKQRLASGETSSVDYYALIGVRRGCSRSELERA 418
GP WKRHNV+YREIPGKLC LT KS++LK ++A+GE +VDYY L+GVRRGC+RSEL+RA
Sbjct: 355 GPPWKRHNVKYREIPGKLCELTTKSKKLKAKMANGEIGNVDYYGLVGVRRGCTRSELDRA 414
Query: 419 HLLLCLRHKPDRATSFIDRCELADERDVDSVKERAKMSALLLYRLVQKGYTSVMGTILDX 478
+LLLCLRHKPD+A +F++RC+ D+ ++ SVK+RAKMS+LLLYRL+Q+GYT++
Sbjct: 415 NLLLCLRHKPDKALAFMERCDFFDQSEISSVKDRAKMSSLLLYRLIQRGYTALAAA---- 470
Query: 479 XXXXXXXXXXXXXXXXXXXXXXXXXXXSHEPEMNKPDSRSCNVVEDKSTLVSSSTVNPA- 537
+ E ++P +S ++ TL + + P
Sbjct: 471 ----------IAEEEQRKKMMVLTQMSTKTVEEHEPVEKSGSI-----TLTDFAEIKPGN 515
Query: 538 --VFQGVFCRDLAVVGNLLSQARFNQPIPVKYEALSC 572
+QGVFCRDLA VG+LLS+ FNQPIP+KY+A+SC
Sbjct: 516 SNAYQGVFCRDLAAVGSLLSRTGFNQPIPMKYDAISC 552
>AT1G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:568704-570418 FORWARD
LENGTH=513
Length = 513
Score = 509 bits (1311), Expect = e-144, Method: Compositional matrix adjust.
Identities = 277/559 (49%), Positives = 355/559 (63%), Gaps = 60/559 (10%)
Query: 16 WWLTNRKIVEKYIKDARSLIATQEQSEIXXXXXXXXXXXXISPRLDQALELRARSLLYLR 75
WW NRK V+KY+K+A+ LI +Q+ ++I ISP + ALEL+ARSLLYLR
Sbjct: 6 WWKRNRKKVDKYMKNAKDLITSQDPNDIVSALSLLNSTLSISPHHELALELKARSLLYLR 65
Query: 76 RFKEVADMLQDYIPSLRMANEDPVXXXXXXXXXXXXXXREGVKLLSSSPDSPVRYQSFKC 135
RFK+VA +L +YIPSLR+ NED +L SP SFKC
Sbjct: 66 RFKDVAVLLHNYIPSLRIDNED-------VSSVFAASSELSSLMLLLPSGSPSHDSSFKC 118
Query: 136 FSVSDLKKKVMAGLCKSCEKEGQWRYLVLGEACCHLGLMEDAMVLLQTGKRLASAAFRRE 195
FS S LKKKVMAGL + + +GQWRYLVLG+AC HLGLM+DA++LLQTGKRLA+A RRE
Sbjct: 119 FSYSYLKKKVMAGLSNNSQVQGQWRYLVLGQACYHLGLMDDAIILLQTGKRLATAELRRE 178
Query: 196 SVCWSDDSFSLSGIPFAGDATNXXXXXXXXXXLTDSTESVTQLLTHIKFXXXXXXXXXXX 255
S+CWS+DSF+LS +T+S E V+Q+L+ K
Sbjct: 179 SICWSEDSFNLS------------TSESQPQPITES-EIVSQMLSQTKLFLRRRTAALAA 225
Query: 256 XDAGLYPEAIRHFSKIVDGRRAAPQGFLAECYMHRASAHRSAGRIAESIADCNRTLALDP 315
DAGLY E+IRHFSKI+D RR APQ FL C + RA A++SAGRIA+SIADCN LAL+P
Sbjct: 226 LDAGLYSESIRHFSKIIDSRRGAPQSFLVYCLIRRAFAYKSAGRIADSIADCNLILALEP 285
Query: 316 TCIQALETRASLFETIRCLPDSLHDLEHLKLLYNSILRDRKLPGPAWKRHNVRYREIPGK 375
+CI+ALETRA LF +IRC PDSLHDLEHLKLL+NSILRDR L GP WKRHNVRYREIPGK
Sbjct: 286 SCIEALETRAELFRSIRCFPDSLHDLEHLKLLFNSILRDRSLTGPVWKRHNVRYREIPGK 345
Query: 376 LCTLTAKSQELKQRLASGETSSVDYYALIGVRRGCSRSELERAHLLLCLRHKPDRATSFI 435
LC LT +++K+++ + E + DYY+L+G+ RGCSRSEL RA+LLL LR+K +R+ + I
Sbjct: 346 LCVLTTNIKQMKEKITNRENGNEDYYSLMGIERGCSRSELNRAYLLLNLRYKSERSMTSI 405
Query: 436 DRCELADERDVDSVKERAKMSALLLYRLVQKGYTSVMGTILDXXXXXXXXXXXXXXXXXX 495
DR ++ DE+++ SVK RA+MS LLLYRL+QKGY +V+ I
Sbjct: 406 DRFDIIDEQELVSVKNRARMSTLLLYRLIQKGYYAVLSDI-------------------- 445
Query: 496 XXXXXXXXXXSHEPEMNKP---DSRSCNVVEDKSTLVSSSTVNPA------VFQGVFCRD 546
E +K D+R D + V+ + V + V +GVFCRD
Sbjct: 446 -----------ETVEADKAVAIDNRRIETPMDGNKAVAMTVVRKSNDKLDVVVKGVFCRD 494
Query: 547 LAVVGNLLSQARFNQPIPV 565
+A VG+L+S+A QPI V
Sbjct: 495 MAAVGSLISRAGLRQPITV 513
>AT5G12430.1 | Symbols: TPR16 | Heat shock protein DnaJ with
tetratricopeptide repeat | chr5:4028475-4034086 REVERSE
LENGTH=1165
Length = 1165
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 112/219 (51%), Gaps = 25/219 (11%)
Query: 258 AGLYPEAIRHFSKIVDGRRAAPQGFLAECYMHRASAHRSAGRIAESIADCNRTLALDPTC 317
+G + EA+ H++ + + F A C+ +RA+A+++ G+ +++IADC+ +ALD
Sbjct: 892 SGRHTEAVEHYTAAL-ACNVESRPFTAVCFCNRAAAYKALGQFSDAIADCSLAIALDQNY 950
Query: 318 IQALETRASLFETIRCLPDSLHDLEHLKLLYNSILRDRKLPGPAWKRHNVRYREIPGKLC 377
+A+ RA+LFE IR + D+E Y +IL + + G L
Sbjct: 951 SKAISRRATLFEMIRDYGQAASDMER----YVNILTKQ------------MEEKTSGTLD 994
Query: 378 TLTAKSQELKQ---RLA-----SGETSSVDYYALIGVRRGCSRSELERAHLLLCLRHKPD 429
T+ S +++Q RL+ S + +S+D Y ++GV CS S++ +A+ L+H PD
Sbjct: 995 RSTSMSNDIRQARIRLSELEEKSRKENSLDMYLVLGVVPSCSASDIRKAYRKAALKHHPD 1054
Query: 430 RATSFIDRCELADERDVDSVKERAKMSALLLYRLVQKGY 468
+A + R E DER + E + L++++ + Y
Sbjct: 1055 KAGQSLTRNETKDERLWKEIGEEVRKDTDKLFKMIGEAY 1093
>AT2G41520.1 | Symbols: TPR15 | Heat shock protein DnaJ with
tetratricopeptide repeat | chr2:17317662-17322705 FORWARD
LENGTH=1108
Length = 1108
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 110/214 (51%), Gaps = 19/214 (8%)
Query: 261 YPEAIRHFSKIVDGRRAAPQGFLAECYMHRASAHRSAGRIAESIADCNRTLALDPTCIQA 320
Y EA+ ++ + R + F A C+ +RA+A+++ +IA++IADC+ +ALD +A
Sbjct: 848 YMEAVEQYTAAL-SRNVDSRPFAAICFCNRAAANQALVQIADAIADCSLAMALDENYTKA 906
Query: 321 LETRASLFETIRCLPDSLHDLEHLKLLYNSILRDRKLPGPAWKRHNVRYREIPGKLCTLT 380
+ RA+L E IR + DL+ L + K P + R + R +E+
Sbjct: 907 VSRRATLHEMIRDYDQAASDLQRLISILVKQSDKTKTPETSVDRASSR-KEL-------- 957
Query: 381 AKSQELKQRLASGETSS-----VDYYALIGVRRGCSRSELERAHLLLCLRHKPDRATSFI 435
++ +QRL+ E S +D++ ++GV+ S +++++A+ LRH PD+A +
Sbjct: 958 ---KQARQRLSVMEEKSKEGIHLDFFLIMGVKTSDSAADIKKAYRKAALRHHPDKAAQIL 1014
Query: 436 DRCELADERDVDSVKERAKMSALLLYRLVQKGYT 469
R E ++ + + E A L++++ + Y+
Sbjct: 1015 VRSE-SEGPWLKEILEEVHKGADRLFKMIGEAYS 1047
>AT2G41520.2 | Symbols: TPR15 | Heat shock protein DnaJ with
tetratricopeptide repeat | chr2:17317662-17322705 FORWARD
LENGTH=1077
Length = 1077
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 99/189 (52%), Gaps = 18/189 (9%)
Query: 286 CYMHRASAHRSAGRIAESIADCNRTLALDPTCIQALETRASLFETIRCLPDSLHDLEHLK 345
C+ +RA+A+++ +IA++IADC+ +ALD +A+ RA+L E IR + DL+ L
Sbjct: 841 CFCNRAAANQALVQIADAIADCSLAMALDENYTKAVSRRATLHEMIRDYDQAASDLQRLI 900
Query: 346 LLYNSILRDRKLPGPAWKRHNVRYREIPGKLCTLTAKSQELKQRLA-----SGETSSVDY 400
+ K P + R + R +E+ ++ +QRL+ S E +D+
Sbjct: 901 SILVKQSDKTKTPETSVDRASSR-KEL-----------KQARQRLSVMEEKSKEGIHLDF 948
Query: 401 YALIGVRRGCSRSELERAHLLLCLRHKPDRATSFIDRCELADERDVDSVKERAKMSALLL 460
+ ++GV+ S +++++A+ LRH PD+A + R E ++ + + E A L
Sbjct: 949 FLIMGVKTSDSAADIKKAYRKAALRHHPDKAAQILVRSE-SEGPWLKEILEEVHKGADRL 1007
Query: 461 YRLVQKGYT 469
++++ + Y+
Sbjct: 1008 FKMIGEAYS 1016