Miyakogusa Predicted Gene
- Lj1g3v4862840.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4862840.1 Non Chatacterized Hit- tr|I1NBC1|I1NBC1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.26300
PE,83.75,0,DNA-binding domain of DNA mismatch repair MU,DNA mismatch
repair protein MutS, core; ATPase domain o,CUFF.33463.1
(554 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G02070.2 | Symbols: MSH6 | MUTS homolog 6 | chr4:906079-91293... 750 0.0
AT4G02070.1 | Symbols: MSH6, MSH6-1, ATMSH6 | MUTS homolog 6 | c... 749 0.0
AT3G24495.1 | Symbols: MSH7, MSH6-2, ATMSH7 | MUTS homolog 7 | c... 252 5e-67
AT4G25540.1 | Symbols: MSH3, ATMSH3 | homolog of DNA mismatch re... 210 2e-54
AT3G18524.1 | Symbols: MSH2, ATMSH2 | MUTS homolog 2 | chr3:6368... 171 1e-42
AT4G17380.1 | Symbols: MSH4, ATMSH4 | MUTS-like protein 4 | chr4... 145 9e-35
AT3G20475.1 | Symbols: ATMSH5, MSH5 | MUTS-homologue 5 | chr3:71... 119 4e-27
AT3G24320.1 | Symbols: MSH1, CHM1, ATMSH1, CHM | MUTL protein ho... 119 7e-27
AT1G65070.2 | Symbols: | DNA mismatch repair protein MutS, type... 85 2e-16
AT1G65070.1 | Symbols: | DNA mismatch repair protein MutS, type... 84 2e-16
AT5G54090.1 | Symbols: | DNA mismatch repair protein MutS, type... 83 6e-16
>AT4G02070.2 | Symbols: MSH6 | MUTS homolog 6 | chr4:906079-912930
FORWARD LENGTH=1321
Length = 1321
Score = 750 bits (1936), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/537 (67%), Positives = 431/537 (80%), Gaps = 7/537 (1%)
Query: 1 MERLLARIFSASDAIGRNANKVVLYEDAAKKQLQEFISALRGCELMAQACSSLRVILNDV 60
MERL+AR+FS+ +A GRN +KVVLYED AKKQ+QEFIS LRGCE MA+ACSSLR IL
Sbjct: 779 MERLIARMFSSIEASGRNGDKVVLYEDTAKKQVQEFISTLRGCETMAEACSSLRAILKHD 838
Query: 61 KSRHLSHVLTPGKGLPDVTLDLNHFKDAFDWVEANKSGRVVPHEGVDVEFDSACKAVKEI 120
SR L H+LTPG+ LP+++ + +FKDAFDWVEA+ SGRV+PHEG D E+D ACK V+E
Sbjct: 839 TSRRLLHLLTPGQSLPNISSSIKYFKDAFDWVEAHNSGRVIPHEGADEEYDCACKTVEEF 898
Query: 121 ESSLLKHLKEQRKLLGDTSITYVNVGKETYLLEVPENLCGNIPQYYELRSSKKGFFRYWT 180
ESSL KHLKEQRKLLGD SI YV VGK+ YLLEVPE+L G++P YEL SSKKG RYWT
Sbjct: 899 ESSLKKHLKEQRKLLGDASINYVTVGKDEYLLEVPESLSGSVPHDYELCSSKKGVSRYWT 958
Query: 181 PDIKTFLRELSQAESEKESLLKSTLQRLIGRFCEHHTRWKQLVSATAELDVLISLAIASD 240
P IK L+ELSQA+SEKES LKS QRLIGRFCEH +W+QLVSATAELDVLISLA ASD
Sbjct: 959 PTIKKLLKELSQAKSEKESALKSISQRLIGRFCEHQEKWRQLVSATAELDVLISLAFASD 1018
Query: 241 YNEGPTCRPSFAGTLCTKEAPYLYAKSLGHPVLRSDSLGKGSFVPNDITIGGPNDASFIL 300
EG CRP +G+ + P+L A LGHPVLR DSLG+GSFVPN++ IGG ASFIL
Sbjct: 1019 SYEGVRCRPVISGS-TSDGVPHLSATGLGHPVLRGDSLGRGSFVPNNVKIGGAEKASFIL 1077
Query: 301 LTGPNMGGKSTLLRQVCLAVVMAQVGADVPAESFDLSPVDRIFVRMGAKDNIMAGQSTFF 360
LTGPNMGGKSTLLRQVCLAV++AQ+GADVPAE+F++SPVD+I VRMGAKD+IMAGQSTF
Sbjct: 1078 LTGPNMGGKSTLLRQVCLAVILAQIGADVPAETFEVSPVDKICVRMGAKDHIMAGQSTFL 1137
Query: 361 TELSETATMLSSATSNSLVALDELGRGTSTSDGQAIAESVLDYLVRKVRCRGLFSTHYHR 420
TELSETA ML+SAT NSLV LDELGRGT+TSDGQAIAESVL++ + KV+CRG FSTHYHR
Sbjct: 1138 TELSETAVMLTSATRNSLVVLDELGRGTATSDGQAIAESVLEHFIEKVQCRGFFSTHYHR 1197
Query: 421 LAIDYLQDPQVRLCHMACQVGGGITGLDEVTFLYKLTTGACPKSYGVNVARLAGLPTSLL 480
L++DY +P+V LCHMACQ+G GI G++EVTFLY+LT GACPKSYGVNVARLAGLP +L
Sbjct: 1198 LSVDYQTNPKVSLCHMACQIGEGIGGVEEVTFLYRLTPGACPKSYGVNVARLAGLPDYVL 1257
Query: 481 QKAAAKSKEFEATYGKCRKASSEAYSSNQNWVDEIIAIIQNLNKAATNLNCQDSICD 537
Q+A KS+EFEA YGK + + ++ I II ++ + +DS+C+
Sbjct: 1258 QRAVIKSQEFEALYGKNHRKTDHKLAAM------IKQIISSVASDSDYSASKDSLCE 1308
>AT4G02070.1 | Symbols: MSH6, MSH6-1, ATMSH6 | MUTS homolog 6 |
chr4:906079-912930 FORWARD LENGTH=1324
Length = 1324
Score = 749 bits (1935), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/537 (67%), Positives = 431/537 (80%), Gaps = 7/537 (1%)
Query: 1 MERLLARIFSASDAIGRNANKVVLYEDAAKKQLQEFISALRGCELMAQACSSLRVILNDV 60
MERL+AR+FS+ +A GRN +KVVLYED AKKQ+QEFIS LRGCE MA+ACSSLR IL
Sbjct: 782 MERLIARMFSSIEASGRNGDKVVLYEDTAKKQVQEFISTLRGCETMAEACSSLRAILKHD 841
Query: 61 KSRHLSHVLTPGKGLPDVTLDLNHFKDAFDWVEANKSGRVVPHEGVDVEFDSACKAVKEI 120
SR L H+LTPG+ LP+++ + +FKDAFDWVEA+ SGRV+PHEG D E+D ACK V+E
Sbjct: 842 TSRRLLHLLTPGQSLPNISSSIKYFKDAFDWVEAHNSGRVIPHEGADEEYDCACKTVEEF 901
Query: 121 ESSLLKHLKEQRKLLGDTSITYVNVGKETYLLEVPENLCGNIPQYYELRSSKKGFFRYWT 180
ESSL KHLKEQRKLLGD SI YV VGK+ YLLEVPE+L G++P YEL SSKKG RYWT
Sbjct: 902 ESSLKKHLKEQRKLLGDASINYVTVGKDEYLLEVPESLSGSVPHDYELCSSKKGVSRYWT 961
Query: 181 PDIKTFLRELSQAESEKESLLKSTLQRLIGRFCEHHTRWKQLVSATAELDVLISLAIASD 240
P IK L+ELSQA+SEKES LKS QRLIGRFCEH +W+QLVSATAELDVLISLA ASD
Sbjct: 962 PTIKKLLKELSQAKSEKESALKSISQRLIGRFCEHQEKWRQLVSATAELDVLISLAFASD 1021
Query: 241 YNEGPTCRPSFAGTLCTKEAPYLYAKSLGHPVLRSDSLGKGSFVPNDITIGGPNDASFIL 300
EG CRP +G+ + P+L A LGHPVLR DSLG+GSFVPN++ IGG ASFIL
Sbjct: 1022 SYEGVRCRPVISGS-TSDGVPHLSATGLGHPVLRGDSLGRGSFVPNNVKIGGAEKASFIL 1080
Query: 301 LTGPNMGGKSTLLRQVCLAVVMAQVGADVPAESFDLSPVDRIFVRMGAKDNIMAGQSTFF 360
LTGPNMGGKSTLLRQVCLAV++AQ+GADVPAE+F++SPVD+I VRMGAKD+IMAGQSTF
Sbjct: 1081 LTGPNMGGKSTLLRQVCLAVILAQIGADVPAETFEVSPVDKICVRMGAKDHIMAGQSTFL 1140
Query: 361 TELSETATMLSSATSNSLVALDELGRGTSTSDGQAIAESVLDYLVRKVRCRGLFSTHYHR 420
TELSETA ML+SAT NSLV LDELGRGT+TSDGQAIAESVL++ + KV+CRG FSTHYHR
Sbjct: 1141 TELSETAVMLTSATRNSLVVLDELGRGTATSDGQAIAESVLEHFIEKVQCRGFFSTHYHR 1200
Query: 421 LAIDYLQDPQVRLCHMACQVGGGITGLDEVTFLYKLTTGACPKSYGVNVARLAGLPTSLL 480
L++DY +P+V LCHMACQ+G GI G++EVTFLY+LT GACPKSYGVNVARLAGLP +L
Sbjct: 1201 LSVDYQTNPKVSLCHMACQIGEGIGGVEEVTFLYRLTPGACPKSYGVNVARLAGLPDYVL 1260
Query: 481 QKAAAKSKEFEATYGKCRKASSEAYSSNQNWVDEIIAIIQNLNKAATNLNCQDSICD 537
Q+A KS+EFEA YGK + + ++ I II ++ + +DS+C+
Sbjct: 1261 QRAVIKSQEFEALYGKNHRKTDHKLAAM------IKQIISSVASDSDYSASKDSLCE 1311
>AT3G24495.1 | Symbols: MSH7, MSH6-2, ATMSH7 | MUTS homolog 7 |
chr3:8912418-8918086 REVERSE LENGTH=1109
Length = 1109
Score = 252 bits (643), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 149/336 (44%), Positives = 202/336 (60%), Gaps = 24/336 (7%)
Query: 204 TLQRLIGRFCEHHTRWKQLVSATAELDVLISLAIASDYNEGPTCRPS-FAGTLCTKE--- 259
TL LI F E T+W +++ + LDVL S AIA+ + G RP F + T +
Sbjct: 744 TLTILIELFIERATQWSEVIHTISCLDVLRSFAIAASLSAGSMARPVIFPESEATDQNQK 803
Query: 260 --APYLYAKSLGHPVLRSDSLGKGSF-VPNDITIG------GPNDASFILLTGPNMGGKS 310
P L + L HP + G VPNDI +G G +LLTGPNMGGKS
Sbjct: 804 TKGPILKIQGLWHPFAVA---ADGQLPVPNDILLGEARRSSGSIHPRSLLLTGPNMGGKS 860
Query: 311 TLLRQVCLAVVMAQVGADVPAESFDLSPVDRIFVRMGAKDNIMAGQSTFFTELSETATML 370
TLLR CLAV+ AQ+G VP ES ++S VD IF R+GA D IM G+STF E +ETA++L
Sbjct: 861 TLLRATCLAVIFAQLGCYVPCESCEISLVDTIFTRLGASDRIMTGESTFLVECTETASVL 920
Query: 371 SSATSNSLVALDELGRGTSTSDGQAIAESVLDYLVRKVRCRGLFSTHYHRLAIDYLQDPQ 430
+AT +SLV LDELGRGTST DG AIA SV +LV KV+CR LF+THYH L ++ P+
Sbjct: 921 QNATQDSLVILDELGRGTSTFDGYAIAYSVFRHLVEKVQCRMLFATHYHPLTKEFASHPR 980
Query: 431 VRLCHMACQVGG----GITGLDE-VTFLYKLTTGACPKSYGVNVARLAGLPTSLLQKAAA 485
V HMAC G D+ + FLY+LT GACP+SYG+ VA +AG+P +++ A+
Sbjct: 981 VTSKHMACAFKSRSDYQPRGCDQDLVFLYRLTEGACPESYGLQVALMAGIPNQVVETASG 1040
Query: 486 KSKEFEATYGKCRKAS---SEAYSSNQNWVDEIIAI 518
++ + + G+ K+S SE S +++W+ ++ I
Sbjct: 1041 AAQAMKRSIGENFKSSELRSEFSSLHEDWLKSLVGI 1076
>AT4G25540.1 | Symbols: MSH3, ATMSH3 | homolog of DNA mismatch repair
protein MSH3 | chr4:13042700-13048115 REVERSE LENGTH=1081
Length = 1081
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 143/388 (36%), Positives = 209/388 (53%), Gaps = 14/388 (3%)
Query: 109 EFDSACKAVKEIESSLLKHLKEQRKLLGDTSITYVNVGKETYLLEVPENLCGNIPQYYEL 168
E A +AV I L + RK L ++ ++ V T+L+E+P + +P +
Sbjct: 633 ELAEARQAVLVIREKLDSSIASFRKKLAIRNLEFLQVSGITHLIELPVD--SKVPMNWVK 690
Query: 169 RSSKKGFFRYWTPDIKTFLRELSQAESEKESLLKSTLQRLIGRFCEHHTRWKQLVSATAE 228
+S K RY P+I L EL+ A + +++ + F ++T +K V A A
Sbjct: 691 VNSTKKTIRYHPPEIVAGLDELALATEHLAIVNRASWDSFLKSFSRYYTDFKAAVQALAA 750
Query: 229 LDVLISLAIASDYNEGPTCRPSFAGTLCTKEAPYLYAKSLGHPVLRSDSLGKGSFVPNDI 288
LD L SL+ S RP F C E + +S HPVL +++ + +FVPND
Sbjct: 751 LDCLHSLSTLSRNKN--YVRPEFVDD-C--EPVEINIQSGRHPVL--ETILQDNFVPNDT 803
Query: 289 TIGGPNDASFILLTGPNMGGKSTLLRQVCLAVVMAQVGADVPAESFDLSPVDRIFVRMGA 348
+ + I+ TGPNMGGKS +RQV L +MAQVG+ VPA L +D +F RMGA
Sbjct: 804 ILHAEGEYCQII-TGPNMGGKSCYIRQVALISIMAQVGSFVPASFAKLHVLDGVFTRMGA 862
Query: 349 KDNIMAGQSTFFTELSETATMLSSATSNSLVALDELGRGTSTSDGQAIAESVLDYLVRKV 408
D+I G+STF ELSE + ++ + +S SLV LDELGRGTST DG AIA + L +L+ +
Sbjct: 863 SDSIQHGRSTFLEELSEASHIIRTCSSRSLVILDELGRGTSTHDGVAIAYATLQHLLAEK 922
Query: 409 RCRGLFSTHYHRLAIDYLQDP----QVRLCHMACQVGGGITGLDEVTFLYKLTTGACPKS 464
RC LF THY +A P + ++ Q G D+VT+LYKL G C +S
Sbjct: 923 RCLVLFVTHYPEIAEISNGFPGSVGTYHVSYLTLQKDKGSYDHDDVTYLYKLVRGLCSRS 982
Query: 465 YGVNVARLAGLPTSLLQKAAAKSKEFEA 492
+G VA+LA +P S +++A + + + EA
Sbjct: 983 FGFKVAQLAQIPPSCIRRAISMAAKLEA 1010
>AT3G18524.1 | Symbols: MSH2, ATMSH2 | MUTS homolog 2 |
chr3:6368151-6372409 REVERSE LENGTH=937
Length = 937
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/341 (32%), Positives = 174/341 (51%), Gaps = 30/341 (8%)
Query: 164 QYYELRSSKKGFFRYWTPDIKTFLRELSQAESEKESLLKSTLQRLIGRFCEHHTRWKQLV 223
Q+ L + K G ++ +K + + S K + R++ ++ L
Sbjct: 535 QFIVLETRKDGV-KFTNTKLKKLGDQYQSVVDDYRSCQKELVDRVVETVTSFSEVFEDLA 593
Query: 224 SATAELDVLISLAIASDYNEGPTCRPSFAGTLCTKEAPYLYAKSLGHPVLRSDSLGKGSF 283
+E+DVL+S A + P CRP + + +A + + HP + + +F
Sbjct: 594 GLLSEMDVLLSFADLAASCPTPYCRPE----ITSSDAGDIVLEGSRHPCVEAQDWV--NF 647
Query: 284 VPNDITIGGPNDASFILLTGPNMGGKSTLLRQVCLAVVMAQVGADVPAESFDLSPVDRIF 343
+PND + + F ++TGPNMGGKST +RQV + V+MAQVG+ VP + +S D IF
Sbjct: 648 IPNDCRLM-RGKSWFQIVTGPNMGGKSTFIRQVGVIVLMAQVGSFVPCDKASISIRDCIF 706
Query: 344 VRMGAKDNIMAGQSTFFTELSETATMLSSATSNSLVALDELGRGTSTSDGQAIAESVLDY 403
R+GA D + G STF E+ ETA++L A+ SL+ +DELGRGTST DG +A ++ ++
Sbjct: 707 ARVGAGDCQLRGVSTFMQEMLETASILKGASDKSLIIIDELGRGTSTYDGFGLAWAICEH 766
Query: 404 LVRKVRCRGLFSTHYHRLAIDYLQDPQVRLCHMACQVGGGITGL-------------DEV 450
LV+ R LF+TH+H L L +V G G+ ++
Sbjct: 767 LVQVKRAPTLFATHFHELTA---------LAQANSEVSGNTVGVANFHVSAHIDTESRKL 817
Query: 451 TFLYKLTTGACPKSYGVNVARLAGLPTSLLQKAAAKSKEFE 491
T LYK+ GAC +S+G++VA A P S++ A K+ E E
Sbjct: 818 TMLYKVEPGACDQSFGIHVAEFANFPESVVALAREKAAELE 858
>AT4G17380.1 | Symbols: MSH4, ATMSH4 | MUTS-like protein 4 |
chr4:9708742-9714068 FORWARD LENGTH=792
Length = 792
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 96/276 (34%), Positives = 145/276 (52%), Gaps = 30/276 (10%)
Query: 270 HPVLRSDSLGKGSFVPNDITIGGPNDASFILLTGPNMGGKSTLLRQVCLAVVMAQVGADV 329
HP+L S FV N I + + +++ GPNM GKST L+QVCL V++AQ+G V
Sbjct: 525 HPILES---IHNDFVSNSIFMSEATN--MLVVMGPNMSGKSTYLQQVCLVVILAQIGCYV 579
Query: 330 PAESFDLSPVDRIFVRMGAKDNIMAGQSTFFTELSETATMLSSATSNSLVALDELGRGTS 389
PA + VDRIF RMG DN+ + STF TE+ ETA ++ + T+ SL+ +DELGR TS
Sbjct: 580 PARFATIRVVDRIFTRMGTMDNLESNSSTFMTEMRETAFIMQNVTNRSLIVMDELGRATS 639
Query: 390 TSDGQAIAESVLDYLVRKVRCRGLFSTHYHRLAIDYLQDPQVRLCHMACQVGGGITGLDE 449
+SDG A+A S +YL+ ++ +F+TH LA P V++ H + +
Sbjct: 640 SSDGLAMAWSCCEYLL-SLKAYTVFATHMDSLAELATIYPNVKVLHFYVDIRD-----NR 693
Query: 450 VTFLYKLTTGACP-KSYGVNVARLAGLPTSLLQKAA--------AKSKEFEATYGKCRKA 500
+ F ++L G YG+ +A +AGLP++++ A ++K E GK +
Sbjct: 694 LDFKFQLRDGTLHVPHYGLLLAEVAGLPSTVIDTARIITKRITDKENKRIELNCGKHHEI 753
Query: 501 SSEAYSSNQNWV---------DEIIAIIQNLNKAAT 527
Y Q + D I +QNLN++ T
Sbjct: 754 -HRIYRVAQRLICLKYSRQTEDSIRQALQNLNESFT 788
>AT3G20475.1 | Symbols: ATMSH5, MSH5 | MUTS-homologue 5 |
chr3:7143546-7150811 FORWARD LENGTH=807
Length = 807
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 147/302 (48%), Gaps = 28/302 (9%)
Query: 223 VSATAELDVLISLAIASDYNEGPTCRPSFAGTLCTKEAPYLYAKSLGHPVLRSDSLGKGS 282
V+ AELD ++SLA + N RP + T E+ L G VL+ + +
Sbjct: 502 VNFVAELDCILSLACVAHQNN--YVRP-----VLTVES--LLDIRNGRHVLQE--MAVDT 550
Query: 283 FVPNDITIGGPNDASFILLTGPNMGGKSTLLRQVCLAVVMAQVGADVPAESFDLSPVDRI 342
F+PND I ++ ++TGPN GKS ++QV L V ++ +G+ VPA++ + DRI
Sbjct: 551 FIPNDTEIN--DNGRIHIITGPNYSGKSIYVKQVALIVFLSHIGSFVPADAATVGLTDRI 608
Query: 343 FVRMGAKDNIMAGQSTFFTELSETATMLSSATSNSLVALDELGRGTSTSDGQAIAESVLD 402
F MG+K + A QSTF +L + ML ATS SL LDE G+GT T DG + +
Sbjct: 609 FCAMGSK-FMTAEQSTFMIDLHQVGMMLRQATSRSLCLLDEFGKGTLTEDGIGLLGGTIS 667
Query: 403 YLV------RKVRCRGLFSTHYHRLAIDYLQDPQVRLCHMACQVGGGIT---GLDEVTFL 453
+ R V C TH L + ++ V T ++E+ FL
Sbjct: 668 HFATCAEPPRVVVC-----THLTELLNESCLPVSEKIKFYTMSVLRPDTESANMEEIVFL 722
Query: 454 YKLTTGACPKSYGVNVARLAGLPTSLLQKAAAKSKEFEATYGKCRKASSEAYSSNQNWVD 513
Y+L G SYG++ A LAG+P ++++AA FE+ + + + S +Q + D
Sbjct: 723 YRLIPGQTLLSYGLHCALLAGVPEEVVKRAAIVLDAFESNNNVDKLSLDKISSQDQAFKD 782
Query: 514 EI 515
+
Sbjct: 783 AV 784
>AT3G24320.1 | Symbols: MSH1, CHM1, ATMSH1, CHM | MUTL protein
homolog 1 | chr3:8823229-8829571 REVERSE LENGTH=1118
Length = 1118
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 117/213 (54%), Gaps = 11/213 (5%)
Query: 297 SFILLTGPNMGGKSTLLRQVCLAVVMAQVGADVPAESFDLSPVDRIFVRMGAKDNIMAGQ 356
S LLTGPN GGKS+LLR +C A ++ G VPAES + D I + M + D+ + G+
Sbjct: 762 SLFLLTGPNGGGKSSLLRSICAAALLGISGLMVPAESACIPHFDSIMLHMKSYDSPVDGK 821
Query: 357 STFFTELSETATMLSSATSNSLVALDELGRGTSTSDGQAIAESVLDYLVRKVRCRGLFST 416
S+F E+SE +++S ATS SLV +DE+ RGT T+ G IA SV++ L C G+ ST
Sbjct: 822 SSFQVEMSEIRSIVSQATSRSLVLIDEICRGTETAKGTCIAGSVVESL-DTSGCLGIVST 880
Query: 417 HYHRLAIDYLQDPQVRLCHMACQVGGGITGLDEVTFLYKLTTGACPKSYGVNVARLAGLP 476
H H + L + M + + G + T +KLT G C +S A+ G+P
Sbjct: 881 HLHGIFSLPLTAKNITYKAMGAE---NVEGQTKPT--WKLTDGVCRESLAFETAKREGVP 935
Query: 477 TSLLQKAAAKSKEFEATYGKCRKASSEAYSSNQ 509
S++Q+A A + + Y K AS+E +Q
Sbjct: 936 ESVIQRAEAL---YLSVYAK--DASAEVVKPDQ 963
>AT1G65070.2 | Symbols: | DNA mismatch repair protein MutS, type 2
| chr1:24173047-24176244 REVERSE LENGTH=876
Length = 876
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 133/290 (45%), Gaps = 24/290 (8%)
Query: 221 QLVSATAELDVLISLAIASDYNEG--------PTCRPSFAGTLCTKEAPYLYAKSLGHPV 272
L+ ELD+ + A +++ G T P A + + + P L LG P
Sbjct: 319 HLLDRILELDIAFARASHANWINGVYPNVTSEHTKTPGLAVDIDSAQHPLLLGSVLGSP- 377
Query: 273 LRSDSLGKGSFVPNDITIGGPNDASFILLTGPNMGGKSTLLRQVCLAVVMAQVGADVPAE 332
G P + I + A ++++GPN GGK+ LL+ + L +M++ G +PA+
Sbjct: 378 ------NGGDIFPVPVDIKVESSAKVVVISGPNTGGKTALLKTLGLLSLMSKSGMYLPAK 431
Query: 333 SFDLSP-VDRIFVRMGAKDNIMAGQSTFFTELSETATMLSSATSNSLVALDELGRGTSTS 391
+ P D I +G ++ STF +S +L A+ NSLV LDE+ GT S
Sbjct: 432 NCPRLPWFDLILADIGDPQSLEQSLSTFSGHISRIRQILDIASENSLVLLDEICSGTDPS 491
Query: 392 DGQAIAESVLDYLVRKVRCRGLFSTHYHRLAIDYLQDPQVRLCHMACQVGGGITGLDEVT 451
+G A+A S+L Y+ +V + STHY L+ L+D + R + A + ++ +
Sbjct: 492 EGVALATSILQYIKNRVNV-AVVSTHYGDLS--RLKDNEPRFQNAAMEF-----SMETLQ 543
Query: 452 FLYKLTTGACPKSYGVNVARLAGLPTSLLQKAAAKSKEFEATYGKCRKAS 501
+++ G+ S + VA+ G +L+ A +++ RK S
Sbjct: 544 PTFRVLWGSTGLSNALRVAKSIGFNKRILENAHKWTEKLNPEQDVERKGS 593
>AT1G65070.1 | Symbols: | DNA mismatch repair protein MutS, type 2
| chr1:24173132-24176244 REVERSE LENGTH=857
Length = 857
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 133/290 (45%), Gaps = 24/290 (8%)
Query: 221 QLVSATAELDVLISLAIASDYNEG--------PTCRPSFAGTLCTKEAPYLYAKSLGHPV 272
L+ ELD+ + A +++ G T P A + + + P L LG P
Sbjct: 319 HLLDRILELDIAFARASHANWINGVYPNVTSEHTKTPGLAVDIDSAQHPLLLGSVLGSP- 377
Query: 273 LRSDSLGKGSFVPNDITIGGPNDASFILLTGPNMGGKSTLLRQVCLAVVMAQVGADVPAE 332
G P + I + A ++++GPN GGK+ LL+ + L +M++ G +PA+
Sbjct: 378 ------NGGDIFPVPVDIKVESSAKVVVISGPNTGGKTALLKTLGLLSLMSKSGMYLPAK 431
Query: 333 SFDLSP-VDRIFVRMGAKDNIMAGQSTFFTELSETATMLSSATSNSLVALDELGRGTSTS 391
+ P D I +G ++ STF +S +L A+ NSLV LDE+ GT S
Sbjct: 432 NCPRLPWFDLILADIGDPQSLEQSLSTFSGHISRIRQILDIASENSLVLLDEICSGTDPS 491
Query: 392 DGQAIAESVLDYLVRKVRCRGLFSTHYHRLAIDYLQDPQVRLCHMACQVGGGITGLDEVT 451
+G A+A S+L Y+ +V + STHY L+ L+D + R + A + ++ +
Sbjct: 492 EGVALATSILQYIKNRVNV-AVVSTHYGDLS--RLKDNEPRFQNAAMEF-----SMETLQ 543
Query: 452 FLYKLTTGACPKSYGVNVARLAGLPTSLLQKAAAKSKEFEATYGKCRKAS 501
+++ G+ S + VA+ G +L+ A +++ RK S
Sbjct: 544 PTFRVLWGSTGLSNALRVAKSIGFNKRILENAHKWTEKLNPEQDVERKGS 593
>AT5G54090.1 | Symbols: | DNA mismatch repair protein MutS, type 2
| chr5:21948283-21952550 REVERSE LENGTH=796
Length = 796
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 14/203 (6%)
Query: 284 VPNDITIGGPNDASFILLTGPNMGGKSTLLRQVCLAVVMAQVGADVPA-ESFDLSPVDRI 342
+P D I +++TGPN GGK+ L+ V LA +MA+ G V A ES + D I
Sbjct: 424 IPADFQIS--KGTRVLVITGPNTGGKTICLKSVGLAAMMAKSGLYVLATESARIPWFDNI 481
Query: 343 FVRMGAKDNIMAGQSTFFTELSETATMLSSATSNSLVALDELGRGTSTSDGQAIAESVLD 402
+ +G + +++ STF L + + +LS +TS SLV LDE+G GT+ +G A+ ++L+
Sbjct: 482 YADIGDEQSLLQSLSTFSGHLKQISEILSHSTSRSLVLLDEVGAGTNPLEGAALGMAILE 541
Query: 403 YLVRKVRCRGLFSTHYHRLAIDYLQDPQVRLCHMACQVGGGITGLDEVTF--LYKLTTGA 460
+ +TH+ L L + D++ YK+ G
Sbjct: 542 SFAESGSLLTMATTHHGELKT---------LKYSNSAFENACMEFDDLNLKPTYKILWGV 592
Query: 461 CPKSYGVNVARLAGLPTSLLQKA 483
+S +N+A GLP +++ A
Sbjct: 593 PGRSNAINIADRLGLPCDIIESA 615